BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048321
(641 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/639 (60%), Positives = 475/639 (74%), Gaps = 16/639 (2%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFI 60
M + NR T+ QWNS I E+VN+ AHK LLLFRQMKQN +EPNNLTFP +
Sbjct: 1 MVTPAATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSV 60
Query: 61 AKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDV 106
AKAC+KL +L YSQ++H H+VKS F VKC +L AY +F M RDV
Sbjct: 61 AKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDV 120
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
ASWN+M++GFAQ+GF++ V+ LF M + GI+AD VTV+GLT +A+ K L +L+S+HSF
Sbjct: 121 ASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSF 180
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
GI IG+D DVSV NTWI++YAKC + +AE VF GI++ L+T VSWNSM+AG + ++
Sbjct: 181 GIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCS 240
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
++ F++ M+ GFR D++T++SLLSS V PE L G+L+H+HGI G D D+ VINTLI
Sbjct: 241 KAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLI 300
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
SMYSKCGDI SAR LFD + +TRVSWTAMI+GYA+KGDLDEA+ LF AMEA GE PDLV
Sbjct: 301 SMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLV 360
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++S++SGCGQ+GALELGKW D YA + GLKDN+MVCNALID+Y+KCGS+ +ARELFY +
Sbjct: 361 TIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTM 420
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
PEK +VSWTT+IAGCALNGEF EAL LF Q++EL L+PN +TFLAVLQAC H GFLEKGW
Sbjct: 421 PEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGW 480
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
K NP LDHYSCMADLLGRKG+LKEA +F+Q+MP K D GIW LL AC
Sbjct: 481 --ECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSAC 538
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
KIH N+ IGE VAY LF+LEP +A PYV+MAN YA G+WD VA IRTMMK N+ K PG
Sbjct: 539 KIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPG 598
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
+SL +NGKT FT EDR H E L Y L+ LAL +E
Sbjct: 599 KSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLALQMKE 637
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/617 (59%), Positives = 454/617 (73%), Gaps = 23/617 (3%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFI 60
M + NR T+ QWNS I E+VN+ AHK LLLFRQMKQN +EPNNLTFP +
Sbjct: 1 MVTPAATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSV 60
Query: 61 AKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDV 106
AKAC+KL +L YSQ++H H+VKS F VKC +L AY +F M RDV
Sbjct: 61 AKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDV 120
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
ASWN+M+ GFAQ+GF++ V+ LF M + GI+AD VTV+GLT +A+ K L +L+S+HSF
Sbjct: 121 ASWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSF 180
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
GI IG+D DVSV NTWI++YAKC + +AE VF GI++ L+T VSWNSM+AG + ++
Sbjct: 181 GIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCS 240
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
++ F++ M+ GFR D++T++SLLSS V PE L G+L+H+HGI G D D+ VINTLI
Sbjct: 241 KAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLI 300
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
SMYSKCGDI SAR LFD + +TRVSWTAMI+G A+KGDLDEA+ LF AMEA GE PDLV
Sbjct: 301 SMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLV 360
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++S++SGCGQ+GALELGKW D YA + GLKDN+MVCNALID+Y+KCGS+ +ARELFY +
Sbjct: 361 TIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTM 420
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
PEK +VSWTT+IAGCALNGEF EAL LF Q++EL L+PN +TFLAVLQAC H GFLEKGW
Sbjct: 421 PEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGW 480
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
K NP LDHYSCMADLLGRKG+LKEA +F+Q+MP K D GIW LL AC
Sbjct: 481 --ECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSAC 538
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
KIH N+ IGE VAY LF+LEP +A PYV+MAN YA G+WD VA IRTMMK N+ K G
Sbjct: 539 KIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSSG 598
Query: 587 QSLFHINGKTCTFTAED 603
+ K C+ ED
Sbjct: 599 E-------KPCSSKWED 608
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/648 (55%), Positives = 468/648 (72%), Gaps = 17/648 (2%)
Query: 3 VSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
+S+L LN + ST+ WNS IR AVN+ A K L LF Q+K N ++PNN TFPF++K
Sbjct: 1 MSTLTQHLNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSK 60
Query: 63 ACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVAS 108
ACAKLS L SQ+IH H+VKSPF VKC ++D AY +FD+M VR++AS
Sbjct: 61 ACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIAS 120
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
WNAM++GF+Q+G L+ V LF MRLVG + D TV+GLT+A I AK L LK+VH+ GI
Sbjct: 121 WNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGI 180
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
G+DAD SV NTWI++Y+KC +L++A++VF GI++ R+ VSWNS++A + K+ D+
Sbjct: 181 ETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDA 240
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
+ Y+ ++ +GF+ D +T++SLLSS PEAL+ G L+H HG G D D+S+INTLISM
Sbjct: 241 VKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM 300
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
YS+CGDI SA +LFDG+ RT VSWTAMISGY++ G +D+AL LF AME GE PD+VTV
Sbjct: 301 YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTV 360
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
LS+ISGCG++GAL LG W DNYA LK +V+VCNALIDMY+KCGS+ DARE+FY+LP
Sbjct: 361 LSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ VVSWT MIA CALNGEF EALDLF L E + PN +TFLAVLQAC H G+LEKG
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
++ + GI NP LDHYSCM DLLGRKGKL EAL+ +Q MP+K D GIWG LL ACKI
Sbjct: 481 FMMMTERYGI--NPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKI 538
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
H N+EIGEYV+ LF+L+P A +VEMAN YA GRWD VA +R M+ NQ++K PG+S
Sbjct: 539 HNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKS 598
Query: 589 LFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHL-KWI 635
+ +NG + F EDR H +S L Y L LA+ +++ +SSH +W+
Sbjct: 599 VVQVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRWV 646
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/626 (56%), Positives = 437/626 (69%), Gaps = 19/626 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S++N WN Q+REAVN+N+ ++LLLFR+MK+ EPNN TFPF+AKACA+L+ + Y +M+
Sbjct: 611 SSVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMV 670
Query: 77 HGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H H++KSPF VKCD LD A K+F+ M VRD +WNAML GF Q G
Sbjct: 671 HTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHT 730
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ V LF MRL I D VTVM L Q+A K L LLK +H+FGI +GVD +V NTW
Sbjct: 731 DKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTW 790
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV-AGCTYGDKFDDSLNFYRHMMYNGFR 241
IS+Y KC DL A+LVF I+ RTVVSWNS+ A +G+ FD + YR M+ + F+
Sbjct: 791 ISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFD-AFGHYRLMLRDEFK 849
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D++T ++L +S P+ L QGRL+HSH IH G D D+ INT ISMYSK GD SAR+L
Sbjct: 850 PDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLL 909
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + RT VSWT MISGYA+KGD+DEAL LF AM G PDLVT+LS+ISGCG+ G+L
Sbjct: 910 FDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSL 969
Query: 362 ELGKWFDNYA-CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
E+GKW D A G KDNVMVCNALIDMYSKCGSI +AR++F EK +V+WTTMIAG
Sbjct: 970 EIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAG 1029
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
ALNG F+EA++LF ++++LD +PN +TFLAVLQAC H+G LEKGW I IS
Sbjct: 1030 YALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS- 1088
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P LDHYSCM DLLGRKGKL EAL+ + +M K DAGIWG LL ACKIH N++I E A
Sbjct: 1089 -PGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAAD 1147
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
LF LEP AAPYVEM+N YA G WDG A IR+MMK +KK+PG+S+ +NGK TFT
Sbjct: 1148 SLFNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVIQVNGKNHTFT 1207
Query: 601 AEDRYHAESELTYPVLDCLALHSREE 626
+R H E+E Y L+ L+L +R+E
Sbjct: 1208 VGERGHMENEAIYSTLNGLSLFARDE 1233
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/636 (55%), Positives = 446/636 (70%), Gaps = 18/636 (2%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I R ST+ WNS R VN+ A L+LFRQMKQ+ I PNN TFPF+ KACAKLS L
Sbjct: 12 INRFSTLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRN 71
Query: 73 SQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
SQ+IH H++KS F VKC RL+ A+ +F EM VRD+ASWNAML+GFAQ
Sbjct: 72 SQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQ 131
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
GFL+ + L +MRL GI+ D VTV+ L + + K L+ L +V+SFGI IGV DVSV
Sbjct: 132 SGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSV 191
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
NT I++Y+KC +L AE +F I LR+VVSWNSM+A +K ++N Y+ M+
Sbjct: 192 ANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDG 251
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
GF D++T+++LLSS + P+AL G LVHSHG+ G D DV V+NTLI MYSKCGD+ SA
Sbjct: 252 GFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSA 311
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R LF+G+ D+T VSWT MIS YA+KG + EA+ LF AMEAAGE PDLVTVL++ISGCGQ+
Sbjct: 312 RFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQT 371
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GALELGKW DNY+ + GLKDNV+VCNALIDMY+KCG DA+ELFY + + VVSWTTMI
Sbjct: 372 GALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMI 431
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
CALNG+ +AL+LF ++E+ ++PN +TFLAVLQAC H G +E+G + GI
Sbjct: 432 TACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGI 491
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
NP +DHYSCM DLLGRKG L+EAL+ ++SMP + D+GIW LL ACK+H +E+G+YV
Sbjct: 492 --NPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYV 549
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
+ LF+LEP A PYVEMAN YA W+GVA IR MK QV+K PGQS+ +NGK
Sbjct: 550 SEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTI 609
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREE--AYSSHL 632
FT EDR H E+ Y +LD L S++ AYS +
Sbjct: 610 FTVEDRDHPETLYIYDMLDGLTSRSKKGLLAYSEEI 645
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/634 (55%), Positives = 441/634 (69%), Gaps = 19/634 (2%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL RI S++N WN QIREAVN+N+ ++LLLFR+MK+ EPNN TFPF+AKACA+L+
Sbjct: 613 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 672
Query: 69 DLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
D+ +M+H H++KSPF VKC+ +D A K+F+ M RD +WNAML
Sbjct: 673 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 732
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GF Q G + LF MRL I D VTVM L Q+A K L LL+++H+ GI +GVD
Sbjct: 733 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 792
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV-AGCTYGDKFDDSLNFYR 233
V+V NTWIS+Y KC DL A+LVF I+ RTVVSWNSM A +G+ FD + Y
Sbjct: 793 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD-AFGLYC 851
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M+ F+ D++T ++L +S PE L QGRL+HSH IH G D D+ INT ISMYSK
Sbjct: 852 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 911
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
D SAR+LFD + RT VSWT MISGYA+KGD+DEAL LF AM +GE PDLVT+LS+IS
Sbjct: 912 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 971
Query: 354 GCGQSGALELGKWFDNYA-CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
GCG+ G+LE GKW D A G +DNVM+CNALIDMYSKCGSI +AR++F PEK VV
Sbjct: 972 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 1031
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
+WTTMIAG ALNG F+EAL LF ++++LD +PN +TFLAVLQAC H+G LEKGW I
Sbjct: 1032 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 1091
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
IS P LDHYSCM DLLGRKGKL+EAL+ +++M K DAGIWG LL ACKIH N+
Sbjct: 1092 KQVYNIS--PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNV 1149
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
+I E A LF LEP AAPYVEMAN YA G WDG A IR++MK+ +KK+PG+S+ +
Sbjct: 1150 KIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 1209
Query: 593 NGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
NGK +FT + H E+E+ Y L+ L+L ++++
Sbjct: 1210 NGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 1243
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/634 (55%), Positives = 441/634 (69%), Gaps = 19/634 (2%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL RI S++N WN QIREAVN+N+ ++LLLFR+MK+ EPNN TFPF+AKACA+L+
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 69 DLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
D+ +M+H H++KSPF VKC+ +D A K+F+ M RD +WNAML
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GF Q G + LF MRL I D VTVM L Q+A K L LL+++H+ GI +GVD
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV-AGCTYGDKFDDSLNFYR 233
V+V NTWIS+Y KC DL A+LVF I+ RTVVSWNSM A +G+ FD + Y
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD-AFGLYC 245
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M+ F+ D++T ++L +S PE L QGRL+HSH IH G D D+ INT ISMYSK
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
D SAR+LFD + RT VSWT MISGYA+KGD+DEAL LF AM +GE PDLVT+LS+IS
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 354 GCGQSGALELGKWFDNYA-CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
GCG+ G+LE GKW D A G +DNVM+CNALIDMYSKCGSI +AR++F PEK VV
Sbjct: 366 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
+WTTMIAG ALNG F+EAL LF ++++LD +PN +TFLAVLQAC H+G LEKGW I
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
IS P LDHYSCM DLLGRKGKL+EAL+ +++M K DAGIWG LL ACKIH N+
Sbjct: 486 KQVYNIS--PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNV 543
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
+I E A LF LEP AAPYVEMAN YA G WDG A IR++MK+ +KK+PG+S+ +
Sbjct: 544 KIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 603
Query: 593 NGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
NGK +FT + H E+E+ Y L+ L+L ++++
Sbjct: 604 NGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637
>gi|255582516|ref|XP_002532043.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528286|gb|EEF30333.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 468
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/442 (62%), Positives = 338/442 (76%), Gaps = 14/442 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TIN +NSQIREAVN+N AHK + LFRQ+KQ IEPNN TFPFI KACAKLS+L YSQ+IH
Sbjct: 2 TINLFNSQIREAVNQNCAHKAISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIH 61
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
H++KSPF VKC +LD AY +F +M RDV SWNAML+GFAQ+GF E
Sbjct: 62 THVIKSPFYSNVFVQTALLDMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSE 121
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
V +F MR G+ D VT+MG++ A K L L KSVHSFGI IG+ DVSV NTWI
Sbjct: 122 RVFCMFREMRFAGVFPDSVTLMGVSGAISCMKDLELAKSVHSFGIRIGIHNDVSVANTWI 181
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
S YAKC DL MAE VF GIE LR+VVSWNSM+AG Y +K D+LN Y+ M+++GF D
Sbjct: 182 SLYAKCYDLAMAESVFNGIEVGLRSVVSWNSMIAGYAYLEKRIDALNSYKRMLHDGFMPD 241
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
++T+V+LLSS + PEA+ QG VHSHGI +G D ++ V NTLISMYSK GD+ SAR LFD
Sbjct: 242 ISTIVTLLSSCLQPEAVRQGMQVHSHGIRFGCDSEIHVANTLISMYSKFGDVYSARCLFD 301
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+C+R+ V+WT+MISGYA+KG++DEAL+LF AMEAAGE PDLVTVLS+ISGCGQ+G LE+
Sbjct: 302 SMCNRSCVTWTSMISGYAEKGNMDEALKLFNAMEAAGEKPDLVTVLSVISGCGQTGILEV 361
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GKW YA S LK NV+VCNALIDMY+KCGSI DA +LF +P++ VV+WTTMIAGCAL
Sbjct: 362 GKWIHVYADSNCLKHNVVVCNALIDMYAKCGSIDDAWDLFNTMPDRTVVTWTTMIAGCAL 421
Query: 424 NGEFVEALDLFHQLMELDLRPN 445
NG F E+LDLF+Q+++ L+PN
Sbjct: 422 NGLFKESLDLFYQMIDFGLKPN 443
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 203/406 (50%), Gaps = 8/406 (1%)
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF ++ GI+ + T + +A +L + +H+ I ++V V +
Sbjct: 23 ISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIHTHVIKSPFYSNVFVQTALLDM 82
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC L +A VF + +R V SWN+M+ G + +R M + G D
Sbjct: 83 CVKCHQLDIAYNVFVKMPKR--DVTSWNAMLLGFAQLGFSERVFCMFREMRFAGVFPDSV 140
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T++ + + C + L + VHS GI G DVSV NT IS+Y+KC D+ A +F+GI
Sbjct: 141 TLMGVSGAISCMKDLELAKSVHSFGIRIGIHNDVSVANTWISLYAKCYDLAMAESVFNGI 200
Query: 306 --CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
R+ VSW +MI+GYA +AL + M G +PD+ T+++++S C Q A+
Sbjct: 201 EVGLRSVVSWNSMIAGYAYLEKRIDALNSYKRMLHDGFMPDISTIVTLLSSCLQPEAVRQ 260
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G ++ G + V N LI MYSK G + AR LF ++ + V+WT+MI+G A
Sbjct: 261 GMQVHSHGIRFGCDSEIHVANTLISMYSKFGDVYSARCLFDSMCNRSCVTWTSMISGYAE 320
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
G EAL LF+ + +P+ VT L+V+ C TG LE G I + D + +N
Sbjct: 321 KGNMDEALKLFNAMEAAGEKPDLVTVLSVISGCGQTGILEVGKWIHVYA-DSNCLKHNVV 379
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + + D+ + G + +A D +MP ++ W T++ C ++
Sbjct: 380 V--CNALIDMYAKCGSIDDAWDLFNTMPDRT-VVTWTTMIAGCALN 422
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%)
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
+A+ LF ++ G P+ T ++ C + L + + NV V AL+
Sbjct: 21 KAISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIHTHVIKSPFYSNVFVQTALL 80
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
DM KC + A +F +P++ V SW M+ G A G +F ++ + P+ V
Sbjct: 81 DMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSERVFCMFREMRFAGVFPDSV 140
Query: 448 TFLAV 452
T + V
Sbjct: 141 TLMGV 145
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/623 (36%), Positives = 352/623 (56%), Gaps = 22/623 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W I V +K L L+ QM++ I P+ L F + KAC SDL + +H
Sbjct: 88 WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + S + KC L+ A ++FD M RDV SWNA++ G++Q G L
Sbjct: 148 ARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALA 207
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M++ GI+ + T++ + H L K +H + I G+++DV V N ++ YA
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA 267
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC ++ A +F ER+ R V SWN+++ G + + ++L F+ M G + +
Sbjct: 268 KCGNVNTAHKLF----ERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+VS+L + AL QG+ +H + I GF+ + V N L++MY+KCG+++SA LF+ +
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM 383
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ V+W A+ISGY+Q G EAL LF M+A G PD ++S++ C ALE GK
Sbjct: 384 PKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGK 443
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
Y G + NV+V L+D+Y+KCG++ A++LF +PE+ VVSWTTMI ++G
Sbjct: 444 QIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHG 503
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+AL LF ++ E + + + F A+L AC+H G +++G D G++ P+L+
Sbjct: 504 HGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLA--PKLE 561
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ DLLGR G L EA +++M ++ DA +WG LL AC+IH NIE+GE A LF+L
Sbjct: 562 HYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFEL 621
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P +A YV ++N YA RW+ VA +R MMK VKK PG S+ ++ TF DR
Sbjct: 622 DPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRT 681
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H +SE Y +L+ L R+ Y
Sbjct: 682 HPQSEQIYAMLEILYEQMRKAGY 704
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 164/322 (50%), Gaps = 4/322 (1%)
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V W + G ++ +L Y M G D +S++ + L GR VH
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
I GF+ DV V L SMY+KCG +++AR +FD + R VSW A+I+GY+Q G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EAL LF M+ G P+ T++S++ C ALE GK YA G++ +V+V N L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
+MY+KCG++ A +LF +P + V SW +I G +LN + EAL F+++ ++PN +
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
T ++VL AC H LE+G I G N + + + ++ + G + A
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVG--NALVNMYAKCGNVNSAYKLF 380
Query: 508 QSMPIKSDAGIWGTLLCACKIH 529
+ MP K + W ++ H
Sbjct: 381 ERMP-KKNVVAWNAIISGYSQH 401
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 17/295 (5%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WN+ I ++ H+ L F +M+ I+PN++T + ACA L L Q IHG
Sbjct: 287 VASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG 346
Query: 79 HIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ ++S F KC ++ AYK+F+ M ++V +WNA++ G++Q G
Sbjct: 347 YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHE 406
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L LF M+ GI+ D ++ + A H L K +H + I G +++V V +
Sbjct: 407 ALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVD 466
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC ++ A+ +F + E + VVSW +M+ +D+L + M G +LD
Sbjct: 467 IYAKCGNVNTAQKLFERMPE--QDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDH 524
Query: 245 TTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
++L++ + QG + YG + L+ + + G +D A
Sbjct: 525 IAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEA 579
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/641 (33%), Positives = 349/641 (54%), Gaps = 23/641 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+ I + + WN + E + +++ LF++M++ I N+ TF I K A L
Sbjct: 509 FDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGR 568
Query: 70 LIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ + IHG + K + + K +D A+K+FDE+ RDV SWN+M+ G
Sbjct: 569 VGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISG 628
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
GF + L F M ++ + D T++ A + LSL +++H G+ +
Sbjct: 629 CVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSRE 688
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V NT + Y+KC +L A F + ++ TVVSW S++A +DD++ + M
Sbjct: 689 VMFNNTLLDMYSKCGNLNDAIQAFEKMGQK--TVVSWTSLIAAYVREGLYDDAIRLFYEM 746
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G DV ++ S+L + C +L +GR VH++ L + V N L+ MY+KCG +
Sbjct: 747 ESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSM 806
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ A ++F I + VSW MI GY++ +EAL+LF M+ PD +T+ ++ C
Sbjct: 807 EEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR-PDGITMACLLPAC 865
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
G ALE+G+ G + V NALIDMY KCGS+ AR LF +PEK +++WT
Sbjct: 866 GSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWT 925
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQY 473
MI+GC ++G EA+ F ++ ++P+ +TF ++L AC+H+G L +GW S+I
Sbjct: 926 VMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISE 985
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ P+L+HY+CM DLL R G L +A + +++MPIK DA IWG LLC C+IH ++E
Sbjct: 986 ----CNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVE 1041
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+ E VA +F+LEP +A YV +AN YA +W+ V +R + + +KK PG S +
Sbjct: 1042 LAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQ 1101
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
GK TF + D H +++ + +L+ L + + E +S +++
Sbjct: 1102 GKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRY 1142
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/539 (28%), Positives = 268/539 (49%), Gaps = 25/539 (4%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
+P R+ + +++ N++I + + + L R ++++++ N + I + CA
Sbjct: 406 VPRSSTRVGAFAKLDE-NTKICKFCEVGDLRNAVELLRMSQKSELDLN--AYSSILQLCA 462
Query: 66 KLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDE-MAVRDVASWN 110
+ L +M+H I + +V C L +IFD ++ V WN
Sbjct: 463 EHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWN 522
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
M+ +A++G + LF M+ +GI + T + + + K +H +
Sbjct: 523 LMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKL 582
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G + +V N+ I++Y K ++ A +F + +R VVSWNSM++GC +L
Sbjct: 583 GFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDR--DVVSWNSMISGCVMNGFSHSALE 640
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
F+ M+ +D+ T+V+ +++ +L GR +H G+ F +V NTL+ MYS
Sbjct: 641 FFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYS 700
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
KCG+++ A F+ + +T VSWT++I+ Y ++G D+A+RLF+ ME+ G PD+ ++ S
Sbjct: 701 KCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTS 760
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++ C +L+ G+ NY + + V NAL+DMY+KCGS+ +A +F +P K
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKD 820
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
+VSW TMI G + N EAL LF + M+ + RP+ +T +L AC LE G I
Sbjct: 821 IVSWNTMIGGYSKNSLPNEALKLFAE-MQKESRPDGITMACLLPACGSLAALEIGRGIHG 879
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ Y+ EL + + D+ + G L A +P K D W ++ C +H
Sbjct: 880 CILRN---GYSSELHVANALIDMYVKCGSLVHARLLFDMIPEK-DLITWTVMISGCGMH 934
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/612 (34%), Positives = 332/612 (54%), Gaps = 19/612 (3%)
Query: 32 KNEAHKTLLLFR-QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----- 85
KN + +T L F +M+ +D++P F ++ K C +DL + IHG ++ + F
Sbjct: 124 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVF 183
Query: 86 ---------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
KC ++D AYK+FD M RD+ SWN ++ GF+Q GF + L L M+ G
Sbjct: 184 AMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEG 243
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
+ D +T++ + AA L + KS+H + I G V++ Y+KC ++ A
Sbjct: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
L+F G+++ +TVVSWNSM+ G + + ++ + M+ G T++ L +
Sbjct: 304 LIFDGMDQ--KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACAD 361
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
L +G+ VH D+SV+N+LISMYSKC +D A +F+ + RT VSW AM
Sbjct: 362 LGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAM 421
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I GYAQ G + EAL F M++ G PD T++S+I + KW L
Sbjct: 422 ILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCL 481
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
N+ V AL+DMYSKCG+I AR+LF + ++ V++W MI G +G ALDLF +
Sbjct: 482 DKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ + + PN +T+L+V+ AC+H+G +++G D G+ P +DHY M DLLGR
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLE--PSMDHYGAMVDLLGR 599
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G++KEA DF+++MPI ++G +L ACKIH NIE+GE A LF+L P +V +
Sbjct: 600 AGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLL 659
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
AN YA +W VA +R M++ +KK PG S+ + + +F + H +S+ Y L
Sbjct: 660 ANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFL 719
Query: 617 DCLALHSREEAY 628
+ L + Y
Sbjct: 720 EELVYEIKAAGY 731
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 205/436 (47%), Gaps = 18/436 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I A K L L +M+ P+++T + A A + L+ + IHG+ +
Sbjct: 216 WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ F KC ++ A IFD M + V SWN+M+ G+ Q G E +
Sbjct: 276 RAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIA 335
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M GI VT+M A L K VH F + + +D+SV N+ IS Y+
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYS 395
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + +A +F + RT VSWN+M+ G + ++LN + M G + D T+
Sbjct: 396 KCKRVDIASDIFNNLNG--RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS++ + + +H I D ++ V L+ MYSKCG I AR LFD I D
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
R ++W AMI GY G AL LF M+ P+ +T LS+IS C SG ++ G +
Sbjct: 514 RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRH 573
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F + GL+ ++ A++D+ + G I +A + +P + + M+ C ++
Sbjct: 574 FKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHK 633
Query: 426 EFVEALDLFHQLMELD 441
+L EL+
Sbjct: 634 NIEVGEKAAKKLFELN 649
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 194/385 (50%), Gaps = 2/385 (0%)
Query: 71 IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+Y++ + + S F K ++ A ++F+ + + A ++ ML G+A+ LE L
Sbjct: 77 LYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLC 136
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
MR ++ L + L K +H I A+V ++ YAKC
Sbjct: 137 RMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
+ A +F + E R +VSWN+++AG + +L M G R D T+V++
Sbjct: 197 QIDDAYKMFDRMPE--RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTV 254
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L + L+ G+ +H + I GF V++ L MYSKCG +++AR++FDG+ +T
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW +M+ GY Q G+ ++A+ +F M G P VT++ + C G LE GK+ +
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKF 374
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
L ++ V N+LI MYSKC + A ++F L + VSW MI G A NG EA
Sbjct: 375 VDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEA 434
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQA 455
L+ F ++ L ++P+ T ++V+ A
Sbjct: 435 LNCFSEMKSLGMKPDSFTMVSVIPA 459
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 21/298 (7%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS + V E K + +F +M + I+P +T ACA L DL + +H
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + S + KC R+D A IF+ + R SWNAM++G+AQ G +
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVS 432
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F M+ +G++ D T++ + A K +H I +D ++ V +
Sbjct: 433 EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALV 492
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC + MA +F I + R V++WN+M+ G +L+ + M +
Sbjct: 493 DMYSKCGAIHMARKLFDMISD--RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPN 550
Query: 244 VTTVVSLLSSFVCPEA-LVQGRLVH--SHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T +S++S+ C + LV L H S YG + + ++ + + G I A
Sbjct: 551 DITYLSVISA--CSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+S++SK G I+ A +F+ I D+ + M+ GYA+ L+ AL M P
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ ++ CG + L+ GK + NV +++MY+KC I DA ++F
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+PE+ +VSW T+IAG + NG +AL+L ++ + RP+ +T + VL A G L
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 465 GWAI 468
G +I
Sbjct: 267 GKSI 270
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL + + L+ ++SK GSI +A +F + +K+ + TM+ G A N AL
Sbjct: 76 GLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFL 135
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++ D++P F +L+ C L++G I
Sbjct: 136 CRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/612 (34%), Positives = 330/612 (53%), Gaps = 19/612 (3%)
Query: 32 KNEAHKTLLLFR-QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----- 85
KN + +T L F +M+ +D++P F ++ K C +DL + IHG ++ + F
Sbjct: 124 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVF 183
Query: 86 ---------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
KC ++D AYK+FD M RD+ SWN ++ GF+Q GF + L L M+ G
Sbjct: 184 AMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEG 243
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
+ D +T++ + AA L + KS+H + I G V++ Y+KC ++ A
Sbjct: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
L+F G+++ +TVVSWNSM+ G + + ++ + M+ G T++ L +
Sbjct: 304 LIFDGMDQ--KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACAD 361
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
L +G+ VH D+SV+N+LISMYSKC +D A +F+ + RT VSW AM
Sbjct: 362 LGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAM 421
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I GYAQ G + EAL F M++ G PD T++S+I + KW L
Sbjct: 422 ILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCL 481
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
N+ V AL+DMYSKCG+I AR+LF + ++ V++W MI G +G ALDLF +
Sbjct: 482 DKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ + + PN +T+L+V+ AC+H+G +++G D G+ P +DHY M DLLGR
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLE--PSMDHYGAMVDLLGR 599
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G++KEA DF+++MPI ++G ACKIH NIE+GE A LF+L P +V +
Sbjct: 600 AGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLL 659
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
AN YA +W VA +R M++ +KK PG S+ + + +F + H +S+ Y L
Sbjct: 660 ANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFL 719
Query: 617 DCLALHSREEAY 628
+ L + Y
Sbjct: 720 EELVYEIKAAGY 731
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 193/401 (48%), Gaps = 17/401 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I A K L L +M+ P+++T + A A + L+ + IHG+ +
Sbjct: 216 WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ F KC ++ A IFD M + V SWN+M+ G+ Q G E +
Sbjct: 276 RAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIA 335
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M GI VT+M A L K VH F + + +D+SV N+ IS Y+
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYS 395
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + +A +F + RT VSWN+M+ G + ++LN + M G + D T+
Sbjct: 396 KCKRVDIASDIFNNLNG--RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS++ + + +H I D ++ V L+ MYSKCG I AR LFD I D
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
R ++W AMI GY G AL LF M+ P+ +T LS+IS C SG ++ G +
Sbjct: 514 RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRH 573
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
F + GL+ ++ A++D+ + G I +A + +P
Sbjct: 574 FKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP 614
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 194/385 (50%), Gaps = 2/385 (0%)
Query: 71 IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+Y++ + + S F K ++ A ++F+ + + A ++ ML G+A+ LE L
Sbjct: 77 LYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLC 136
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
MR ++ L + L K +H I A+V ++ YAKC
Sbjct: 137 RMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
+ A +F + E R +VSWN+++AG + +L M G R D T+V++
Sbjct: 197 QIDDAYKMFDRMPE--RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTV 254
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L + L+ G+ +H + I GF V++ L MYSKCG +++AR++FDG+ +T
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW +M+ GY Q G+ ++A+ +F M G P VT++ + C G LE GK+ +
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKF 374
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
L ++ V N+LI MYSKC + A ++F L + VSW MI G A NG EA
Sbjct: 375 VDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEA 434
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQA 455
L+ F ++ L ++P+ T ++V+ A
Sbjct: 435 LNCFSEMKSLGMKPDSFTMVSVIPA 459
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 21/298 (7%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS + V E K + +F +M + I+P +T ACA L DL + +H
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + S + KC R+D A IF+ + R SWNAM++G+AQ G +
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVS 432
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F M+ +G++ D T++ + A K +H I +D ++ V +
Sbjct: 433 EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALV 492
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC + MA +F I + R V++WN+M+ G +L+ + M +
Sbjct: 493 DMYSKCGAIHMARKLFDMISD--RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPN 550
Query: 244 VTTVVSLLSSFVCPEA-LVQGRLVH--SHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T +S++S+ C + LV L H S YG + + ++ + + G I A
Sbjct: 551 DITYLSVISA--CSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+S++SK G I+ A +F+ I D+ + M+ GYA+ L+ AL M P
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ ++ CG + L+ GK + NV +++MY+KC I DA ++F
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+PE+ +VSW T+IAG + NG +AL+L ++ + RP+ +T + VL A G L
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 465 GWAI 468
G +I
Sbjct: 267 GKSI 270
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL + + L+ ++SK GSI +A +F + +K+ + TM+ G A N AL
Sbjct: 76 GLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFL 135
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++ D++P F +L+ C L++G I
Sbjct: 136 CRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEI 169
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/626 (35%), Positives = 332/626 (53%), Gaps = 21/626 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFI--AKACAKLSDLIYSQMI 76
I W I + LF QM++N PN T+ I A A A S L + +++
Sbjct: 386 IFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVV 445
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H H ++ F+ KC +D A +FD M RDV SWNAM+ G AQ G
Sbjct: 446 HKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCG 505
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+F M+ G+ D T + L L + VH + G+ +D V + +
Sbjct: 506 HEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAF 565
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I Y +C + A L+F + +R V +WN+M+ G ++L+ + M GF
Sbjct: 566 IHMYIRCGSIDDARLLFDKLS--VRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIP 623
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D TT +++LS+ V EAL + VHSH G +D+ V N L+ YSKCG++ A+ +F
Sbjct: 624 DATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVF 682
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + +R +WT MI G AQ G +A F M G +PD T +S++S C +GALE
Sbjct: 683 DDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALE 742
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
K N+A S GL ++ V NAL+ MY+KCGSI DAR +F + E+ V SWT MI G A
Sbjct: 743 WVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLA 802
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+G +EALD F ++ +PN +++AVL AC+H G +++G + D GI P
Sbjct: 803 QHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGI--EP 860
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
++HY+CM DLLGR G L+EA F+ +MPI+ D WG LL AC + N+E+ E+ A
Sbjct: 861 TMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKER 920
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
KL+P SA+ YV ++N YA G+W+ +R+MM+R ++K PG+S ++ + +F
Sbjct: 921 LKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVG 980
Query: 603 DRYHAESELTYPVLDCLALHSREEAY 628
D H ES+ Y L+ L + + Y
Sbjct: 981 DTSHPESKEIYAQLNDLIERLKAKGY 1006
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 229/458 (50%), Gaps = 18/458 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I A + ++ +M+Q +PN +T+ I KAC +L + + IH HI+
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHII 246
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S F VKC ++ A IFD+M R+V SW M+ G A G +
Sbjct: 247 QSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 306
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ G + T + + A A L +K VHS ++ G+ D+ V N + YA
Sbjct: 307 LFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYA 366
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + A +VF G+ E R + SW M+ G + ++ + + M NG ++TT
Sbjct: 367 KSGSIDDARVVFDGMTE--RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTY 424
Query: 248 VSLL--SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+S+L S+ AL ++VH H GF D+ + N LI MY+KCG ID AR++FDG+
Sbjct: 425 LSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM 484
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
CDR +SW AM+ G AQ G EA +F M+ G +PD T LS+++ G + ALE
Sbjct: 485 CDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVN 544
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+A GL + V +A I MY +CGSI DAR LF L + V +W MI G A
Sbjct: 545 EVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQR 604
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
EAL LF Q+ P+ TF+ +L A LE
Sbjct: 605 CGREALSLFLQMQREGFIPDATTFINILSANVDEEALE 642
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 233/433 (53%), Gaps = 18/433 (4%)
Query: 47 QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLD 92
Q I ++ ++ I + C K D++ ++ +H I+KS +++C RL
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 93 CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAI 152
CA ++FD++ +++ W M+ G+A+ G E+ +R++ MR Q + +T + + +A
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+L K +H+ I G +DV V ++ Y KC ++ A+L+F + E R V+SW
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVE--RNVISW 288
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
M+ G + + ++ + + M GF + T VS+L++ AL + VHSH ++
Sbjct: 289 TVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN 348
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G LD+ V N L+ MY+K G ID ARV+FDG+ +R SWT MI G AQ G EA L
Sbjct: 349 AGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSL 408
Query: 333 FFAMEAAGELPDLVTVLSMI--SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
F M+ G LP+L T LS++ S + ALE K +A G ++ + NALI MY
Sbjct: 409 FLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMY 468
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
+KCGSI DAR +F + ++ V+SW M+ G A NG EA +F Q+ + L P+ T+L
Sbjct: 469 AKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYL 528
Query: 451 AVLQACTHTGFLE 463
++L T LE
Sbjct: 529 SLLNTHGSTDALE 541
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
D++ + + G +D + V++L + E ++ + VH I G + ++ V N L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
+Y +CG + AR +FD + + WT MI GYA+ G ++A+R++ M P+ +
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T LS++ C L+ GK + G + +V V AL++MY KCGSI DA+ +F +
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
E+ V+SWT MI G A G EA LF Q+ PN T++++L A G LE
Sbjct: 281 VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/626 (35%), Positives = 334/626 (53%), Gaps = 21/626 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD--LIYSQMI 76
I W I + LF QM++ PN T+ I A A S L + + +
Sbjct: 197 IFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEV 256
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H H K+ F+ KC +D A +FD M RDV SWNAM+ G AQ G
Sbjct: 257 HKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCG 316
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+F M+ G D T + L + +K VH + +G+ +D+ V + +
Sbjct: 317 HEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAF 376
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y +C + A+L+F + +R V +WN+M+ G ++L+ + M GF
Sbjct: 377 VHMYIRCGSIDDAQLIFDKLA--VRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFP 434
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D TT V++LS+ V EAL + VHS+ I G +D+ V N L+ MY+KCG+ A+ +F
Sbjct: 435 DATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVF 493
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + +R +WT MISG AQ G EA LF M G +PD T +S++S C +GALE
Sbjct: 494 DDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
K ++A + GL ++ V NAL+ MY+KCGS+ DAR +F + E+ V SWT MI G A
Sbjct: 554 WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLA 613
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+G ++ALDLF ++ +PN +F+AVL AC+H G +++G + D GI P
Sbjct: 614 QHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGI--EP 671
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
++HY+CM DLLGR G+L+EA F+ +MPI+ WG LL AC + N+E+ E+ A
Sbjct: 672 TMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKER 731
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
KL+P SA+ YV ++N YA G W+ +R+MM+R ++K PG+S ++ + +F
Sbjct: 732 LKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVG 791
Query: 603 DRYHAESELTYPVLDCLALHSREEAY 628
D H ES+ Y L L + E Y
Sbjct: 792 DTSHPESKEIYAKLKDLIKRLKAEGY 817
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 226/455 (49%), Gaps = 20/455 (4%)
Query: 35 AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------- 85
A + ++ QM++ +PN +T+ I KAC L + + IH HI++S F
Sbjct: 11 AEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETA 70
Query: 86 -----VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
VKC +D A IFD+M R+V SW M+ G A G + F M+ G +
Sbjct: 71 LVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPN 130
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T + + A A L +K VHS ++ G+ D+ V N + YAK + A +VF
Sbjct: 131 SYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFD 190
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL--SSFVCPE 258
G+ E R + SW M+ G + ++ + + M G ++TT +S+L S+
Sbjct: 191 GMVE--RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTG 248
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL + VH H GF D+ V N LI MY+KCG ID AR++FDG+CDR +SW AMI
Sbjct: 249 ALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIG 308
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
G AQ G EA +F M+ G +PD T LS+++ +GA E K +A GL
Sbjct: 309 GLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVS 368
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ V +A + MY +CGSI DA+ +F L + V +W MI G A EAL LF Q+
Sbjct: 369 DLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMR 428
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
P+ TF+ +L A LE W + Y
Sbjct: 429 REGFFPDATTFVNILSANVGEEALE--WVKEVHSY 461
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 221/458 (48%), Gaps = 19/458 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I + + F QM++ PN+ T+ I A A L + + +H H V
Sbjct: 99 WTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAV 158
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K +D A +FD M RD+ SW M+ G AQ G +
Sbjct: 159 NAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFS 218
Query: 128 LFYNMRLVGIQADFVTVMGLTQAA--IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LF M G + T + + A+ L +K VH G +D+ V N I
Sbjct: 219 LFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHM 278
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC + A LVF G+ + R V+SWN+M+ G ++ + M GF D T
Sbjct: 279 YAKCGSIDDARLVFDGMCD--RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDST 336
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T +SLL++ V A + VH H + G D+ V + + MY +CG ID A+++FD +
Sbjct: 337 TYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKL 396
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R +W AMI G AQ+ EAL LF M G PD T ++++S ALE K
Sbjct: 397 AVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVK 456
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+YA GL D + V NAL+ MY+KCG+ A+++F + E+ V +WT MI+G A +G
Sbjct: 457 EVHSYAIDAGLVD-LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHG 515
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
EA LF Q++ + P+ T++++L AC TG LE
Sbjct: 516 CGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 194/354 (54%), Gaps = 4/354 (1%)
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ G+A+ G+ E+ ++++ MR G Q + +T + + +A L K +H+ I G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+DV V ++ Y KC + A+L+F + ER V+SW M+ G + + ++ +
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVER--NVISWTVMIGGLAHYGRGQEAFHR 118
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ M GF + T VS+L++ AL + VHSH ++ G LD+ V N L+ MY+K
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
G ID ARV+FDG+ +R SWT MI G AQ G EA LF ME G LP+L T LS+
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238
Query: 352 I--SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+ S +GALE K +A G ++ V NALI MY+KCGSI DAR +F + ++
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
V+SW MI G A NG EA +F ++ + P+ T+L++L TG E
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/604 (35%), Positives = 325/604 (53%), Gaps = 18/604 (2%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF------------- 85
L F +MK + + P F ++ K C SDL + IHG ++ S F
Sbjct: 15 LSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNM 74
Query: 86 -VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
KC +++ AY +FD M RD+ WN M+ G+AQ GF + L L M G + D +T+
Sbjct: 75 YAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITI 134
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + A + L + +VH + + G ++ V+V + Y+KC + +A ++F G++
Sbjct: 135 VSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDH 194
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R TVVSWNSM+ G + ++ ++ M+ G + TV+ L + L +G+
Sbjct: 195 R--TVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGK 252
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH D DVSV+N+LISMYSKC +D A +F + ++T VSW AMI GYAQ G
Sbjct: 253 FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNG 312
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
++EAL F M++ PD T++S+I + KW L NV V
Sbjct: 313 CVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMT 372
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
AL+DMY+KCG+I AR+LF + + V++W MI G +G +++LF ++ + ++P
Sbjct: 373 ALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKP 432
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
N +TFL L AC+H+G +E+G D GI P +DHY M DLLGR G+L +A
Sbjct: 433 NDITFLCALSACSHSGLVEEGLCFFESMKKDYGIE--PTMDHYGAMVDLLGRAGRLNQAW 490
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
DF+Q MPIK ++G +L ACKIH N+++GE A+ +FKL P +V +AN YA
Sbjct: 491 DFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATAS 550
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
W VA +RT+M+++ ++K PG SL I + +F + H +S+ Y L+ L R
Sbjct: 551 MWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIR 610
Query: 625 EEAY 628
Y
Sbjct: 611 AAGY 614
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 129/251 (51%)
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M+ G D +L+F+ M ++ R V LL L +G+ +H I G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
F ++ + +++MY+KC I+ A +FD + +R V W MISGYAQ G AL L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M G PD +T++S++ + L +G Y G + V V AL+DMYSKCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
S+ AR +F + + VVSW +MI G +G+ A+ +F ++++ ++P VT + L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 455 ACTHTGFLEKG 465
AC G LE+G
Sbjct: 241 ACADLGDLERG 251
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 21/298 (7%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS I V +A +L+F++M ++P N+T ACA L DL + +H
Sbjct: 196 TVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVH 255
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + S + KC R+D A IF + + + SWNAM++G+AQ G +
Sbjct: 256 KLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVN 315
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F M+ I+ D T++ + A K +H I +D +V V +
Sbjct: 316 EALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALV 375
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + A +F + R V++WN+M+ G S+ ++ M + +
Sbjct: 376 DMYAKCGAIHTARKLFDMMNA--RHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPN 433
Query: 244 VTTVVSLLSSFVCPEA-LVQGRL--VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T + LS+ C + LV+ L S YG + + ++ + + G ++ A
Sbjct: 434 DITFLCALSA--CSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQA 489
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%)
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
M+ GYA+ LD AL F M+ P + ++ CG + L+ GK + G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
N+ +++MY+KC I DA +F +PE+ +V W TMI+G A NG AL L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++ E RP+ +T +++L A T L G A+
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAV 153
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R+ T+ WN+ I ++ L F +M+ +I+P++ T + A A+LS ++
Sbjct: 294 RNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAK 353
Query: 75 MIHGHIV-----KSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG ++ K+ FV KC + A K+FD M R V +WNAM+ G+ G
Sbjct: 354 WIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHG 413
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ + LF M+ I+ + +T + A H+
Sbjct: 414 LGKTSVELFKEMKKGTIKPNDITFLCALSACSHS 447
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 232/636 (36%), Positives = 343/636 (53%), Gaps = 30/636 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
RS WN I +++ + K L FRQ + EPN T AC L +
Sbjct: 111 RSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGL 170
Query: 75 MIHGHIVKSPFVKC-------------DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG+I++S F+ + ++ A ++FDEM RDV SW+ M+ G+ Q G
Sbjct: 171 KMHGYIIRSGFLDIPSVQNSLLSMYADNDMERAEELFDEMCERDVISWSVMIGGYVQTGE 230
Query: 122 LENVLRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ L+LF M I+ D +T++ + +A + +S+ +SVH I G+D D+ V N
Sbjct: 231 AKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGN 290
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I Y+KCDD + A F E R VSWNS+++G +K ++L+ + M GF
Sbjct: 291 SIIDMYSKCDDHESAFKAFN--EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGF 348
Query: 241 RLDVTTVVSLLSS---FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
R D T+V+LL S FV P Q + +HS I +G++L+ VIN+LI YSKC I+
Sbjct: 349 RADEVTLVNLLQSCKYFVDP---FQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIEL 405
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A LFD + + VSW+AMI+G+ G DEA+ LF M A E P+ VT+LS++
Sbjct: 406 AWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSV 465
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
S L+ KW A GL V V A++DMY+KCG IG +R+ F +PEK +VSW M
Sbjct: 466 SADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAM 525
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IA C +NG +AL L ++ L+PN VT L+VL AC+H G +E+G + D G
Sbjct: 526 IAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHG 585
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHLNIEIG 535
+ P L+HYSCM D+L R GKL A++ ++ MP ++ AG+WG LL AC+ N +G
Sbjct: 586 V--EPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLG 643
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
A+ + +LEP S+A Y ++ YA G W A +R ++K V+ G SL H+ K
Sbjct: 644 AGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDK 703
Query: 596 TCTFTAEDRYHAESELTYPVL----DCLALHSREEA 627
F A D H + + V+ DC+ + R E+
Sbjct: 704 AWRFVAGDESHPRAGEIWGVVEQLHDCMKIAERNES 739
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 264/537 (49%), Gaps = 42/537 (7%)
Query: 19 INQWNSQIREAVNKN--EAHKTLLLFRQMKQNDIEPNNLTFPF-IAKACAKLSDLIYSQM 75
+ WN I+++ N+ ++ + + QMK+ + + T I KAC+ L + + +
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP-VRHGKS 70
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++K F +K LD A +FD M RD SWN M+ G G
Sbjct: 71 IHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 130
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKS---VHSFGIHIGVDADVS 177
+ L F R++ + + T++ AIHA + L ++ +H + I G S
Sbjct: 131 SDKGLWWFRQARVIAFEPNVSTLV----LAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS 186
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V N+ +S YA +D++ AE +F + E R V+SW+ M+ G + +L + M
Sbjct: 187 VQNSLLSMYAD-NDMERAEELFDEMCE--RDVISWSVMIGGYVQTGEAKMALQLFLEMTS 243
Query: 238 NG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
N LD T+VS+L + + GR VH I G D D+ V N++I MYSKC D +
Sbjct: 244 NASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHE 303
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
SA F+ + R VSW ++ISG + EAL LF++M AG D VT+++++ C
Sbjct: 304 SAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCK 363
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
K+ + G + N V N+LID YSKC I A +LF L K VSW+
Sbjct: 364 YFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSA 423
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDD 475
MIAG G+ EA+ LF ++ + +PN VT L++L+A + + L++ WA I
Sbjct: 424 MIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR-- 481
Query: 476 KGISYNPELDHYSCMADLLGRKGKL---KEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+G++ E+ + + D+ + G++ ++A D + I S WG ++ AC ++
Sbjct: 482 RGLA--AEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS----WGAMIAACGMN 532
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/636 (36%), Positives = 343/636 (53%), Gaps = 30/636 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
RS WN I +++ + K L FRQ + EPN T AC L +
Sbjct: 97 RSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGL 156
Query: 75 MIHGHIVKSPFVKC-------------DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG+I++S F+ + ++ A ++FDEM RDV SW+ M+ G+ Q G
Sbjct: 157 KMHGYIIRSGFLDIPSVQNSLLSMYADNDMERAEELFDEMCERDVISWSVMIGGYVQTGE 216
Query: 122 LENVLRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ L+LF M I+ D +T++ + +A + +S+ +SVH I G+D D+ V N
Sbjct: 217 AKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGN 276
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I Y+KCDD + A F E R VSWNS+++G +K ++L+ + M GF
Sbjct: 277 SIIDMYSKCDDHESAFKAFN--EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGF 334
Query: 241 RLDVTTVVSLLSS---FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
R D T+V+LL S FV P Q + +HS I +G++L+ VIN+LI YSKC I+
Sbjct: 335 RADEVTLVNLLQSCKYFVDP---FQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIEL 391
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A LFD + + VSW+AMI+G+ G DEA+ LF M A E P+ VT+LS++
Sbjct: 392 AWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSV 451
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
S L+ KW A GL V V A++DMY+KCG IG +R+ F +PEK +VSW M
Sbjct: 452 SADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAM 511
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IA C +NG +AL L ++ L+PN VT L+VL AC+H G +E+G + D G
Sbjct: 512 IAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHG 571
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHLNIEIG 535
+ P L+HYSCM D+L R GKL A++ ++ MP ++ AG+WG LL AC+ N +G
Sbjct: 572 V--EPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLG 629
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
A+ + +LEP S+A Y ++ YA G W A +R ++K V+ G SL H+ K
Sbjct: 630 AGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDK 689
Query: 596 TCTFTAEDRYHAESELTYPVL----DCLALHSREEA 627
F A D H + + V+ DC+ + R E+
Sbjct: 690 AWRFVAGDESHPRAGEIWGVVEQLHDCMKIAERNES 725
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 258/520 (49%), Gaps = 22/520 (4%)
Query: 19 INQWNSQIREAVNKN--EAHKTLLLFRQMKQNDIEPNNLTFPF-IAKACAKLSDLIYSQM 75
+ WN I+++ N+ ++ + + QMK+ + + T I KAC+ L S
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLPGF-DSLT 70
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
G+ V ++K LD A +FD M RD SWN M+ G G + L F R++
Sbjct: 71 STGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVI 130
Query: 136 GIQADFVTVMGLTQAAIHA-KHLSLLK---SVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
+ + T++ AIHA + L ++ +H + I G SV N+ +S YA +D
Sbjct: 131 AFEPNVSTLV----LAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-ND 185
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSL 250
++ AE +F + E R V+SW+ M+ G + +L + M N LD T+VS+
Sbjct: 186 MERAEELFDEMCE--RDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 243
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L + + GR VH I G D D+ V N++I MYSKC D +SA F+ + R
Sbjct: 244 LKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNT 303
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW ++ISG + EAL LF++M AG D VT+++++ C K+ +
Sbjct: 304 VSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSI 363
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
G + N V N+LID YSKC I A +LF L K VSW+ MIAG G+ EA
Sbjct: 364 VIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEA 423
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSC 489
+ LF ++ + +PN VT L++L+A + + L++ WA I +G++ E+ +
Sbjct: 424 IALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAI--RRGLA--AEVAVGTA 479
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ D+ + G++ + +P K+ WG ++ AC ++
Sbjct: 480 ILDMYAKCGEIGLSRKAFDQIPEKNIVS-WGAMIAACGMN 518
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 317/567 (55%), Gaps = 22/567 (3%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIV------------KSPFVKC---DRLDCAYKIFDE 100
+F ++ C+ L DL IH +V K C +D A K+FD+
Sbjct: 31 SFNYLLNCCSSLPDL---SRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQ 87
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M RDV WN ++ G+A G E L L+ NM G+ D T + ++ L
Sbjct: 88 MPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREG 147
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
K VH + G D+DV V ++ ++ Y++ + ELVF E +R +VSW +++AG
Sbjct: 148 KEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFG--EMVVRNIVSWTAVIAGYV 205
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
F + L +R M+ +G + + T+VS+L + E L G+L+H +GI G D DVS
Sbjct: 206 QNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVS 265
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
+ N LI++Y KCG++++AR LFDG+ + VSW AMI+ Y Q A++LF M+A
Sbjct: 266 LTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEK 325
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D +T++S+IS C GAL G+W GL+ NV + NALIDMY+KCG+I AR
Sbjct: 326 VDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAR 385
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
E+F LP + VVSWT+MI CA +G +AL LF ++ + ++PN TF AV AC H+G
Sbjct: 386 EVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSG 445
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+E+G D I P ++H +CM DLLGR G L EA +F+ MP++ D +WG
Sbjct: 446 LVEEGRKHFESMMRDYSIM--PGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWG 503
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
LL +C+IH N+E+ E VA LF L+P + YV M+N YA GRW+ A +R +M+ +
Sbjct: 504 ALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERE 563
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHA 607
+KK PG SL +N + TF + R +
Sbjct: 564 LKKIPGHSLVEVNRRFHTFLSGSRSQS 590
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 231/449 (51%), Gaps = 20/449 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR + + L L+ M + P+N TFPF+ ++CA LS L + +H +IV
Sbjct: 96 WNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIV 155
Query: 82 KSPF----VKCDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F L Y +F EM VR++ SW A++ G+ Q + + L
Sbjct: 156 KHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLG 215
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M G Q + VT++ + A + L+L K +H +GI +GVD DVS+ N I+ Y
Sbjct: 216 VFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYG 275
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +++ A +F G+ ++ +VSWN+M+A + +++ +R M D T+
Sbjct: 276 KCGNVETARSLFDGMV--VQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITM 333
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS++S+ AL GR +H G +++VS+ N LI MY+KCG+ID AR +F+ +
Sbjct: 334 VSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPC 393
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
R+ VSWT+MI A G ++AL+LF M+ G P+ T ++ + C SG +E G K
Sbjct: 394 RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKH 453
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F++ + V C ++D+ + GS+ +A E +P E V W ++ C ++
Sbjct: 454 FESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHS 513
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
A + +L LD P VTF ++
Sbjct: 514 NLELAELVAEKLFLLD--PQTVTFYVLMS 540
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 20/252 (7%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I W + I V + L +FR+M + +PN +T + ACA L L ++IH
Sbjct: 193 NIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIH 252
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+ +K + + KC ++ A +FD M V+++ SWNAM+ + Q
Sbjct: 253 GYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGA 312
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
N ++LF M+ + D++T++ + A L+ + +H G++ +VS+ N I
Sbjct: 313 NAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALI 372
Query: 184 SSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
YAKC ++ +A VF ERL R+VVSW SM+ C +D+L + M G +
Sbjct: 373 DMYAKCGNIDLAREVF----ERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVK 428
Query: 242 LDVTTVVSLLSS 253
+ T ++ ++
Sbjct: 429 PNSFTFAAVFTA 440
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/629 (34%), Positives = 334/629 (53%), Gaps = 38/629 (6%)
Query: 19 INQWNSQIREAVNKN-------EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
I WN + A KN E LL F +K P+ T+P + KAC+ L +
Sbjct: 262 ITLWNG-LMAACTKNFIFIEGLEVFHRLLHFPYLK-----PDAFTYPSVLKACSGLGRVG 315
Query: 72 YSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
Y +M+H H++KS F KC+ + A K+FDEM RDVASWN ++ +
Sbjct: 316 YGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYY 375
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q G E L LF M++ G + D VT+ + + L K +H + G D
Sbjct: 376 QDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGF 435
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V + + Y KC L+MA+ VF I+ + VVSWNSM+AG + + +R M
Sbjct: 436 VSSALVDMYGKCGCLEMAKEVFEQIQRK--NVVSWNSMIAGYSLKGDSKSCIELFRRMDE 493
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G R +TT+ S+L + L G+ +H + I + D+ V ++LI +Y KCG+I S
Sbjct: 494 EGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGS 553
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +F + VSW MISGY + G EAL +F M AG PD +T S++ C Q
Sbjct: 554 AENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQ 613
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
LE GK N+ L+ N +V AL+DMY+KCG++ +A +F LPE+ VSWT+M
Sbjct: 614 LAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSM 673
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---WAISIIQYD 474
IA +G+ EAL LF ++ + D +P++VTFLA+L AC+H G +++G + I +Y
Sbjct: 674 IAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEY- 732
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHLNIE 533
+ P ++HYSC+ DLLGR G+L+EA + +Q P I+ D G+ TL AC +H ++
Sbjct: 733 ----GFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLD 788
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+GE + L + +P + Y+ ++N YA +WD V +R +K +KK PG S +
Sbjct: 789 LGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVG 848
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALH 622
+ F ED+ H ++++ Y + LA H
Sbjct: 849 KRIHPFVVEDKSHPQADMIYECMSILASH 877
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 199/381 (52%), Gaps = 15/381 (3%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
K +H + +G+ ++++C + I+ Y C + A+LVF IE L + WN ++A CT
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAACT 273
Query: 221 YGDKFDDSLN-FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
F + L F+R + + + D T S+L + + G++VH+H I GF +DV
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V+++ + MY+KC + A LFD + +R SW +IS Y Q G ++AL LF M+ +
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD VT+ ++IS C + LE GK G + V +AL+DMY KCG + A
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMA 453
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+E+F + K VVSW +MIAG +L G+ ++LF ++ E +RP T ++L AC+ +
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 513
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
L+ G I I E D + S + DL + G + A + Q+MP K++
Sbjct: 514 VNLQLGKFI-----HGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVV 567
Query: 518 IWGTLLCACKIHLNIEIGEYV 538
W ++ +++G Y+
Sbjct: 568 SWNVMISG-----YVKVGSYL 583
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 130/265 (49%), Gaps = 10/265 (3%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYA 321
G+L+H + G ++++ +LI++Y C SA+++F I + ++ W +++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273
Query: 322 QKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+ E L +F + L PD T S++ C G + GK + G +V
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+V ++ + MY+KC DA +LF +PE+ V SW +I+ +G+ +AL+LF ++
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKG 498
+P+ VT V+ +C LE+G I ++ G + LD + S + D+ G+ G
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIH-MELVRSGFA----LDGFVSSALVDMYGKCG 448
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLL 523
L+ A + + + K+ W +++
Sbjct: 449 CLEMAKEVFEQIQRKNVVS-WNSMI 472
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%), Gaps = 39/239 (16%)
Query: 360 ALE--LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTT 416
ALE LGK S GL++N+ +C +LI++Y C A+ +F + + ++ W
Sbjct: 208 ALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNG 267
Query: 417 MIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACT-----------HTGFLEK 464
++A C N F+E L++FH+L+ L+P+ T+ +VL+AC+ HT ++
Sbjct: 268 LMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKS 327
Query: 465 GWAISII-------------QYDD--KGISYNPELD--HYSCMADLLGRKGKLKEALDFV 507
G+A+ ++ ++D K PE D ++ + + G+ ++AL+
Sbjct: 328 GFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELF 387
Query: 508 QSMPI---KSDAGIWGTLLCACKIHLNIEIGEYVAYCL----FKLEPHSAAPYVEMANK 559
+ M + K D+ T++ +C L++E G+ + L F L+ ++ V+M K
Sbjct: 388 EEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGK 446
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+ + WN I V + L++F M++ ++P+ +TF + AC++L+ L + I
Sbjct: 564 TNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI 623
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H I++S + KC +D A IF+++ RD SW +M+ + G
Sbjct: 624 HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQA 683
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+LF M+ + D VT + + A HA
Sbjct: 684 FEALKLFEKMQQSDAKPDKVTFLAILSACSHA 715
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/629 (34%), Positives = 334/629 (53%), Gaps = 38/629 (6%)
Query: 19 INQWNSQIREAVNKN-------EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
I WN + A KN E LL F +K P+ T+P + KAC+ L +
Sbjct: 70 ITLWNG-LMAACTKNFIFIEGLEVFHRLLHFPYLK-----PDAFTYPSVLKACSGLGRVG 123
Query: 72 YSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
Y +M+H H++KS F KC+ + A K+FDEM RDVASWN ++ +
Sbjct: 124 YGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYY 183
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q G E L LF M++ G + D VT+ + + L K +H + G D
Sbjct: 184 QDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGF 243
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V + + Y KC L+MA+ VF I+ + VVSWNSM+AG + + +R M
Sbjct: 244 VSSALVDMYGKCGCLEMAKEVFEQIQRK--NVVSWNSMIAGYSLKGDSKSCIELFRRMDE 301
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G R +TT+ S+L + L G+ +H + I + D+ V ++LI +Y KCG+I S
Sbjct: 302 EGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGS 361
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +F + VSW MISGY + G EAL +F M AG PD +T S++ C Q
Sbjct: 362 AENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQ 421
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
LE GK N+ L+ N +V AL+DMY+KCG++ +A +F LPE+ VSWT+M
Sbjct: 422 LAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSM 481
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---WAISIIQYD 474
IA +G+ EAL LF ++ + D +P++VTFLA+L AC+H G +++G + I +Y
Sbjct: 482 IAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEY- 540
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHLNIE 533
+ P ++HYSC+ DLLGR G+L+EA + +Q P I+ D G+ TL AC +H ++
Sbjct: 541 ----GFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLD 596
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+GE + L + +P + Y+ ++N YA +WD V +R +K +KK PG S +
Sbjct: 597 LGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVG 656
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALH 622
+ F ED+ H ++++ Y + LA H
Sbjct: 657 KRIHPFVVEDKSHPQADMIYECMSILASH 685
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 209/402 (51%), Gaps = 15/402 (3%)
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D ++ L + I +K+L K +H + +G+ ++++C + I+ Y C + A+LVF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLN-FYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
IE L + WN ++A CT F + L F+R + + + D T S+L +
Sbjct: 62 QTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
+ G++VH+H I GF +DV V+++ + MY+KC + A LFD + +R SW +IS
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y Q G ++AL LF M+ +G PD VT+ ++IS C + LE GK G
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ V +AL+DMY KCG + A+E+F + K VVSW +MIAG +L G+ ++LF ++
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD 300
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGR 496
E +RP T ++L AC+ + L+ G I I E D + S + DL +
Sbjct: 301 EEGIRPTLTTLSSILMACSRSVNLQLGKFIH-----GYIIRNRVEADIFVNSSLIDLYFK 355
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
G + A + Q+MP K++ W ++ +++G Y+
Sbjct: 356 CGNIGSAENVFQNMP-KTNVVSWNVMISG-----YVKVGSYL 391
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 142/286 (49%), Gaps = 10/286 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D T ++SLL + + + L QG+L+H + G ++++ +LI++Y C SA+++
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60
Query: 302 FDGICDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSG 359
F I + ++ W +++ + E L +F + L PD T S++ C G
Sbjct: 61 FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+ GK + G +V+V ++ + MY+KC DA +LF +PE+ V SW +I+
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+G+ +AL+LF ++ +P+ VT V+ +C LE+G I + + +
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHM-----ELVR 235
Query: 480 YNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
LD + S + D+ G+ G L+ A + + + K+ W +++
Sbjct: 236 SGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS-WNSMI 280
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+ + WN I V + L++F M++ ++P+ +TF + AC++L+ L + I
Sbjct: 372 TNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI 431
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H I++S + KC +D A IF+++ RD SW +M+ + G
Sbjct: 432 HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQA 491
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+LF M+ + D VT + + A HA
Sbjct: 492 FEALKLFEKMQQSDAKPDKVTFLAILSACSHA 523
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/620 (33%), Positives = 331/620 (53%), Gaps = 27/620 (4%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
NS +R+AV + +M+ +++ P F ++ + + DL + IHG ++
Sbjct: 120 NSTLRDAVR---------FYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVIT 170
Query: 83 SPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ F KC +++ AYK+F+ M RD+ SWN ++ G+AQ GF +++
Sbjct: 171 NGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQV 230
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
M+ G + D +T++ + A K L + +S+H + G + V+V + +Y K
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C ++ A LVF G+ R VVSWN+M+ G + +++ + M+ G +++
Sbjct: 291 CGSVRSARLVFKGMSSR--NVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMM 348
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
L + L +GR VH DVSV+N+LISMYSKC +D A +F + +
Sbjct: 349 GALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHK 408
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
T V+W AMI GYAQ G ++EAL LF M++ PD T++S+I+ KW
Sbjct: 409 TVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIH 468
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
A + NV VC ALID ++KCG+I AR+LF + E+ V++W MI G NG
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGR 528
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS 488
EALDLF+++ ++PN +TFL+V+ AC+H+G +E+G ++ G+ P +DHY
Sbjct: 529 EALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLE--PTMDHYG 586
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPH 548
M DLLGR G+L +A F+Q MP+K + G +L AC+IH N+E+GE A LF L+P
Sbjct: 587 AMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPD 646
Query: 549 SAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
+V +AN YA WD VA +RT M++ ++K PG SL + + TF + H +
Sbjct: 647 DGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQ 706
Query: 609 SELTYPVLDCLALHSREEAY 628
S+ Y L+ L + Y
Sbjct: 707 SKRIYAYLETLGDEMKAAGY 726
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 210/436 (48%), Gaps = 18/436 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + A + + + QM++ +P+++T + A A L L + IHG+
Sbjct: 211 WNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAF 270
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ F KC + A +F M+ R+V SWN M+ G+AQ G E
Sbjct: 271 RAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFA 330
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M G++ V++MG A + L + VH + DVSV N+ IS Y+
Sbjct: 331 TFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYS 390
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + +A VF ++ +TVV+WN+M+ G +++LN + M + + D T+
Sbjct: 391 KCKRVDIAASVFGNLKH--KTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTL 448
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS++++ Q + +H I D +V V LI ++KCG I +AR LFD + +
Sbjct: 449 VSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQE 508
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-W 366
R ++W AMI GY G EAL LF M+ P+ +T LS+I+ C SG +E G +
Sbjct: 509 RHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYY 568
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNG 425
F++ + GL+ + A++D+ + G + DA + +P K ++ M+ C ++
Sbjct: 569 FESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHK 628
Query: 426 EFVEALDLFHQLMELD 441
+L +LD
Sbjct: 629 NVELGEKTADELFDLD 644
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 238/524 (45%), Gaps = 47/524 (8%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR---LVGIQA 139
S F K + + A ++F+ + + ++ ML G+A+ L + +R + MR ++ +
Sbjct: 84 SLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVY 143
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
DF ++ L+ + L + +H I G +++ ++ YAKC ++ A +F
Sbjct: 144 DFTYLLQLSGENL---DLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMF 200
Query: 200 CGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
ER+ R +VSWN++VAG ++ M G + D T+VS+L +
Sbjct: 201 ----ERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADL 256
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL GR +H + GF+ V+V ++ Y KCG + SAR++F G+ R VSW MI
Sbjct: 257 KALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMI 316
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
GYAQ G+ +EA F M G P V+++ + C G LE G++ +
Sbjct: 317 DGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIG 376
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V V N+LI MYSKC + A +F L K VV+W MI G A NG EAL+LF ++
Sbjct: 377 FDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEM 436
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG-W--AISIIQYDDKGISYNPEL--DHYSC--- 489
D++P+ T ++V+ A + W ++I DK + L H C
Sbjct: 437 QSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAI 496
Query: 490 --------------------MADLLGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCAC 526
M D G G +EALD M +K + + +++ AC
Sbjct: 497 QTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAAC 556
Query: 527 KIHLNIEIGEYVAYCL---FKLEPHSAAPYVEMANKYALGGRWD 567
+E G Y + + LEP + Y M + GR D
Sbjct: 557 SHSGLVEEGMYYFESMKENYGLEP-TMDHYGAMVDLLGRAGRLD 599
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 21/300 (7%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + WN+ I E+ + F +M +EP N++ ACA L DL +
Sbjct: 306 SRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRY 365
Query: 76 IHGHI--------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H + + S + KC R+D A +F + + V +WNAM++G+AQ G
Sbjct: 366 VHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGC 425
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ L LF M+ I+ D T++ + A K +H I +D +V VC
Sbjct: 426 VNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTA 485
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I ++AKC ++ A +F ++E R V++WN+M+ G ++L+ + M +
Sbjct: 486 LIDTHAKCGAIQTARKLFDLMQE--RHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVK 543
Query: 242 LDVTTVVSLLSSFVCPEA-LVQGRLVHSHGI--HYGFDLDVSVINTLISMYSKCGDIDSA 298
+ T +S++++ C + LV+ + + + +YG + + ++ + + G +D A
Sbjct: 544 PNEITFLSVIAA--CSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDA 601
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 95/184 (51%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LIS++ K I A +F+ + + V + M+ GYA+ L +A+R + M +P
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ ++ G++ L G+ + G + N+ A++++Y+KC I DA ++F
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFE 201
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+P++ +VSW T++AG A NG A+ + Q+ E +P+ +T ++VL A L
Sbjct: 202 RMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRI 261
Query: 465 GWAI 468
G +I
Sbjct: 262 GRSI 265
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ T+ WN+ I ++ L LF +M+ +DI+P++ T + A A LS ++
Sbjct: 406 KHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAK 465
Query: 75 MIHGHIV-----KSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG + K+ FV KC + A K+FD M R V +WNAM+ G+ G
Sbjct: 466 WIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNG 525
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L LF M+ ++ + +T + + A H+
Sbjct: 526 HGREALDLFNEMQNGSVKPNEITFLSVIAACSHS 559
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/628 (35%), Positives = 334/628 (53%), Gaps = 20/628 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S I WN I E +++ LF+QM + I+PN+ TF I K A ++ + + +
Sbjct: 214 SKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQV 273
Query: 77 HGHIVKSPFVKCD--------------RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG I K F + ++ CA K+FDE+ RDV SWN+M+ G+ + G
Sbjct: 274 HGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLD 333
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNT 181
+ + +F M + G+ D T++ + A + L L K +HS+ I +D +V NT
Sbjct: 334 DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNT 393
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y+KC DL A VF ++E+ TVVSW SM+ G D ++ + M G
Sbjct: 394 LLDMYSKCGDLNSAIRVFERMDEK--TVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
DV V S+L++ L G++VH + + + V N L MY+KCG + A +
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDV 511
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + + +SW MI GY + +EAL LF M+ + PD TV ++ C AL
Sbjct: 512 FSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESK-PDGTTVACILPACASLAAL 570
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ G+ YA G ++ V NA++DMY KCG + AR LF +P K +VSWT MIAG
Sbjct: 571 DKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGY 630
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
++G EA++ F+Q+ + P+ V+F+++L AC+H+G L++GW I I K
Sbjct: 631 GMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIM--KKECQIE 688
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P L+HY+CM DLL R G L +A F+++MPIK DA IWG LLC C+IH ++++ E VA
Sbjct: 689 PNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAER 748
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+F+LEP + YV +AN YA +W+ V +R + + +KK PG S I GK F A
Sbjct: 749 IFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVA 808
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYS 629
D +++ +L L +EE YS
Sbjct: 809 GDCSKPQAKKIELLLKRLRSKMKEEGYS 836
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 211/385 (54%), Gaps = 4/385 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+VKC L +FD+++ + WN M+ ++ G + LF M +GI+ + T
Sbjct: 195 YVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTF 254
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + + + VH +G ++ +V N+ IS Y ++ A+ +F + +
Sbjct: 255 SSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD 314
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R V+SWNSM++G D + + M+ G +D+ T+V++ + L+ G+
Sbjct: 315 R--DVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK 372
Query: 265 LVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
++HS+ I D +V NTL+ MYSKCGD++SA +F+ + ++T VSWT+MI+GY ++
Sbjct: 373 VLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVRE 432
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G D A++LF M++ G +PD+ V S+++ C +G L+ GK +Y L+ N V
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS 492
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NAL DMY+KCGS+ DA ++F + +K V+SW TMI G N EAL LF + M+ + +
Sbjct: 493 NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAE-MQRESK 551
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
P+ T +L AC L+KG I
Sbjct: 552 PDGTTVACILPACASLAALDKGREI 576
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 2/273 (0%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D+ S+L +++ GR V S G +D + L+ MY KCGD+ R++
Sbjct: 148 FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMV 207
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + W MIS Y+ G+ E++ LF M G P+ T S++ +
Sbjct: 208 FDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARV 267
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E G+ C G V N+LI Y + A++LF L ++ V+SW +MI+G
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
NG +++F +++ + + T + V AC + G L G + Y K + +
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLH--SYSIKAATLD 385
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
E+ + + D+ + G L A+ + M K+
Sbjct: 386 REVRFNNTLLDMYSKCGDLNSAIRVFERMDEKT 418
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/632 (32%), Positives = 348/632 (55%), Gaps = 19/632 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + E +++ LF++M++ + N TF + K A L + + +HG+++
Sbjct: 163 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 222
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + K ++ A+ +FDE++ DV SWN+M+ G GF N L
Sbjct: 223 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 282
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M ++G++ D T++ + A + +LSL +++H FG+ +V NT + Y+
Sbjct: 283 IFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 342
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +L A VF + + T+VSW S++A + D++ + M G R D+ TV
Sbjct: 343 KCGNLNGATEVFVKMGDT--TIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 400
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S++ + C +L +GR VHS+ I G ++ V N LI+MY+KCG ++ AR++F I
Sbjct: 401 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 460
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW MI GY+Q +EAL LF M+ + PD +T+ ++ C AL+ G+
Sbjct: 461 KDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREI 519
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G ++ V AL+DMY+KCG + A+ LF +P+K ++SWT MIAG ++G
Sbjct: 520 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 579
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EA+ F+++ + P+ +F A+L AC+H+G L +GW ++ G+ P+L+HY
Sbjct: 580 NEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVE--PKLEHY 637
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R G L +A F++SMPIK D IWG LL C+IH ++++ E VA +F+LEP
Sbjct: 638 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 697
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ YV +AN YA +W+ V +R M++ K+ PG S + GK F A + H
Sbjct: 698 DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHP 757
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
+++ +L L + + E YSS +++ +E
Sbjct: 758 QAKKIDVLLSKLTMQMQNEDYSSMFRYVLINE 789
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 243/477 (50%), Gaps = 20/477 (4%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
+ P S T NQ N++I + + + L + K ++ N ++ + + CA
Sbjct: 49 VSPSFTNTTHSVTQNQ-NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCA 105
Query: 66 KLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
+ L + +H I+ + +V C L KIFD++ V WN
Sbjct: 106 EKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNL 165
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
++ +A++G + LF M+ +G+ + T + + + K VH + + +G
Sbjct: 166 LMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 225
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
++ +V N+ I++Y K ++ A +F + E VVSWNSM+ GC + L
Sbjct: 226 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP--DVVSWNSMINGCVVNGFSGNGLEI 283
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ M+ G +D+TT+VS+L + L GR +H G+ F +V NTL+ MYSK
Sbjct: 284 FIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 343
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG+++ A +F + D T VSWT++I+ Y ++G +A+ LF M++ G PD+ TV S+
Sbjct: 344 CGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 403
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C S +L+ G+ +Y G+ N+ V NALI+MY+KCGS+ +AR +F +P K +
Sbjct: 404 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 463
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
VSW TMI G + N EAL+LF M+ +P+ +T VL AC L+KG I
Sbjct: 464 VSWNTMIGGYSQNLLPNEALELFLD-MQKQFKPDDITMACVLPACAGLAALDKGREI 519
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/678 (32%), Positives = 343/678 (50%), Gaps = 59/678 (8%)
Query: 12 RIYRSSTINQ---WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+++R T+ W+S I N K F +M +IEPN +TF I KAC S
Sbjct: 112 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYS 171
Query: 69 DLIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
L + IH IVK + + KC + A ++F +M R+V SW A++
Sbjct: 172 ILEKGRKIHT-IVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAII 230
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
AQ L L+ M GI + VT + L + + L+ + +HS G++
Sbjct: 231 QANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLE 290
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG---CTYGDK--FDDS 228
D+ V N I+ Y KC+ ++ A +F + +R V+SW++M+AG Y DK D+
Sbjct: 291 TDMIVANALITMYCKCNSVQEAREIFDRMSKR--DVISWSAMIAGYAQSGYKDKESIDEV 348
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN----- 283
M G + T +S+L + AL QGR +H+ GF+LD S+
Sbjct: 349 FQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNM 408
Query: 284 --------------------------TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ +SMY KCGD+ SA +F + R VSW MI
Sbjct: 409 YAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMI 468
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+GYAQ GD+ + L +M+A G PD VTV++++ CG LE GK A GL+
Sbjct: 469 AGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLE 528
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ +V +LI MYSKCG + +AR +F + + V+W M+AG +G+ +EA+DLF ++
Sbjct: 529 SDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRM 588
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
++ + PN +T AV+ AC+ G +++G I + +D P HY CM DLLGR
Sbjct: 589 LKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQED--FKMTPRKQHYGCMVDLLGRA 646
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G+L+EA +F+QSMP + D +W LL ACK H N+++ E A+ + +LEP A+ Y+ ++
Sbjct: 647 GRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLS 706
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N YA GRWD +R +M +KK G+S I+G+ TF AED H E + + L+
Sbjct: 707 NIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELE 766
Query: 618 CLALHSREEAYSSHLKWI 635
L +E Y+ ++++
Sbjct: 767 TLTKEMKEAGYTPDMRFV 784
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 230/471 (48%), Gaps = 52/471 (11%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--------------GHIVKSPFVKCDR 90
+KQ + N+ T+ + + CAK +M+H G+ + + + K +
Sbjct: 47 IKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFED 106
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ A ++F M +RDV +W++M+ +A F M I+ + +T + + +A
Sbjct: 107 VASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKA 166
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ L + +H+ +G++ DV+V I+ Y+KC ++ +A VF + E R VV
Sbjct: 167 CNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTE--RNVV 224
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW +++ K +++ Y M+ G + T VSLL+S PEAL +GR +HSH
Sbjct: 225 SWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI 284
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG-----D 325
G + D+ V N LI+MY KC + AR +FD + R +SW+AMI+GYAQ G
Sbjct: 285 SERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKES 344
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW------------------- 366
+DE +L M G P+ VT +S++ C GALE G+
Sbjct: 345 IDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTA 404
Query: 367 -FDNYACSGGLKD-----------NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
F+ YA G + + NV+ + + MY KCG + A ++F +P + VVSW
Sbjct: 405 IFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSW 464
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
MIAG A NG+ V+ +L + +P+RVT + +L+AC LE+G
Sbjct: 465 NLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG 515
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 196/356 (55%), Gaps = 7/356 (1%)
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
+ G L ++L ++ G+ + T + + A+ K VH +GV+ D+
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ N+ I+ Y+K +D+ AE VF + LR VV+W+SM+A + + + + M
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMT--LRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ T +S+L + L +GR +H+ G + DV+V LI+MYSKCG+I
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISV 210
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +F + +R VSWTA+I AQ L+EA L+ M AG P+ VT +S+++ C
Sbjct: 211 ACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNT 270
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
AL G+ ++ GL+ +++V NALI MY KC S+ +ARE+F + ++ V+SW+ M
Sbjct: 271 PEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAM 330
Query: 418 IAGCALNG-EFVEALDLFHQLMELDLR----PNRVTFLAVLQACTHTGFLEKGWAI 468
IAG A +G + E++D QL+E R PN+VTF+++L+ACT G LE+G I
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQI 386
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%)
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ G L EA++L ++ G L + T +I C ++ E GK G++ ++
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ N+LI+ YSK + A ++F + + VV+W++MIA A N +A D F ++ + +
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISII 471
+ PNR+TFL++L+AC + LEKG I I
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTI 182
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 316/606 (52%), Gaps = 18/606 (2%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----------- 85
K L F +M+ +++EP F ++ K C ++L + IHG +VKS F
Sbjct: 118 KALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 86 ---VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
KC ++ A K+FD M RD+ SWN ++ G++Q G L + M ++ F+
Sbjct: 178 NMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFI 237
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T++ + A + + + K +H + + G D+ V++ + YAKC LK A L+F G+
Sbjct: 238 TIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGM 297
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
ER VVSWNSM+ + +++ ++ M+ G + +V+ L + L +
Sbjct: 298 LER--NVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H + D +VSV+N+LISMY KC ++D+A +F + RT VSW AMI G+AQ
Sbjct: 356 GRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQ 415
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G EAL F M+A PD T +S+I+ + KW L NV V
Sbjct: 416 NGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFV 475
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+DMY+KCG+I AR +F + E+ V +W MI G +G AL+LF ++ + +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTI 535
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
RPN VTFL+V+ AC+H+G +E G + + S P +DHY M DLLGR G+L E
Sbjct: 536 RPNGVTFLSVISACSHSGLVEAG--LKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNE 593
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A DF+ MP+K ++G +L AC+IH N+ E VA LF+L P +V +AN Y
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRA 653
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
W+ V +R M R ++K PG S+ I + +F + H S+ Y L+ L
Sbjct: 654 ASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQ 713
Query: 623 SREEAY 628
+E Y
Sbjct: 714 IKEAGY 719
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 202/423 (47%), Gaps = 15/423 (3%)
Query: 46 KQNDIEPNNLTFP--FIAKACAKLSDL-----------IYSQMIHGHIVKSPFVKCDRLD 92
++N I N P + + C+ L +L +Y + + + S F + +D
Sbjct: 27 QRNYIPANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVD 86
Query: 93 CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAI 152
A ++F+ + + + ML GFA++ L+ L+ F MR ++ L +
Sbjct: 87 EAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCG 146
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L + K +H + G D+ + YAKC + A VF + E R +VSW
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPE--RDLVSW 204
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N++VAG + +L M + T+VS+L + + G+ +H + +
Sbjct: 205 NTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMR 264
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GFD V++ L+ MY+KCG + +AR+LFDG+ +R VSW +MI Y Q + EA+ +
Sbjct: 265 AGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVI 324
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M G P V+V+ + C G LE G++ + L NV V N+LI MY K
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCK 384
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
C + A +F L + +VSW MI G A NG +EAL+ F Q+ ++P+ T+++V
Sbjct: 385 CKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSV 444
Query: 453 LQA 455
+ A
Sbjct: 445 ITA 447
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 122/241 (50%), Gaps = 4/241 (1%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+S++ + G +D A +F+ I + V + M+ G+A+ DLD+AL+ F M P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ ++ CG L +GK G ++ L +MY+KC + +AR++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFD 194
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+PE+ +VSW T++AG + NG AL++ + + E +L+P+ +T ++VL A + +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRI 254
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G I Y + ++ ++ + + D+ + G LK A M ++ + W +++
Sbjct: 255 GKEIH--GYAMRA-GFDSLVNIATALVDMYAKCGSLKTARLLFDGM-LERNVVSWNSMID 310
Query: 525 A 525
A
Sbjct: 311 A 311
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 131/294 (44%), Gaps = 21/294 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I V + +++F++M ++P +++ ACA L DL + IH V
Sbjct: 305 WNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ S + KC +D A +F ++ R + SWNAM++GFAQ G L
Sbjct: 365 ELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALN 424
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M+ ++ D T + + A K +H + +D +V V + YA
Sbjct: 425 YFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYA 484
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + +A L+F + E R V +WN+M+ G +L + M R + T
Sbjct: 485 KCGAIMIARLIFDMMSE--RHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTF 542
Query: 248 VSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSV--INTLISMYSKCGDIDSA 298
+S++S+ C + LV+ L H + + ++ S+ ++ + + G ++ A
Sbjct: 543 LSVISA--CSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEA 594
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S TI WN+ I + L F QM+ ++P+ T+ + A A+LS +++
Sbjct: 399 QSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 75 MIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG ++++ + KC + A IFD M+ R V +WNAM+ G+ G
Sbjct: 459 WIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ L LF M+ I+ + VT + + A H+
Sbjct: 519 IGKAALELFEEMQKGTIRPNGVTFLSVISACSHS 552
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL + L+ ++ + GS+ +A +F + +K+ V + TM+ G A + +AL F
Sbjct: 64 GLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFF 123
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++ + ++ P F +L+ C L G I + ++ +L + + ++
Sbjct: 124 VRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS---GFSLDLFAMTGLENMY 180
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ ++ EA MP + D W T++
Sbjct: 181 AKCRQVHEARKVFDRMP-ERDLVSWNTIV 208
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/602 (33%), Positives = 324/602 (53%), Gaps = 18/602 (2%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
+F++M+Q + PN +T+ + A + + L + + +H HI+ + +
Sbjct: 332 IFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYA 391
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC ++F+++ RD+ +WN M+ G A+ G E +++ M+ G+ + +T +
Sbjct: 392 KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVI 451
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L A ++ L + +HS + G D+SV N IS YA+C +K A L+F + +
Sbjct: 452 LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRK- 510
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++SW +M+ G ++L ++ M G + + T S+L++ P AL GR +
Sbjct: 511 -DIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRI 569
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H I G D V NTL++MYS CG + AR +FD + R V++ AMI GYA
Sbjct: 570 HQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLG 629
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
EAL+LF ++ G PD VT ++M++ C SG+LE K + G + + NAL
Sbjct: 630 KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNAL 689
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ Y+KCGS DA +F + ++ V+SW +I GCA +G + L LF ++ ++P+
Sbjct: 690 VSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDI 749
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
VTF+++L AC+H G LE+G D GI+ P ++HY CM DLLGR G+L E
Sbjct: 750 VTFVSLLSACSHAGLLEEGRRYFCSMSRDFGIT--PTIEHYGCMVDLLGRAGQLDEVEAL 807
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+++MP +++ IWG LL AC+IH N+ + E A KL+P +AA YV +++ YA G W
Sbjct: 808 IKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMW 867
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
D A +R +M++ V K PG+S + K F AEDR H ESE Y LD L + E
Sbjct: 868 DSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKME 927
Query: 627 AY 628
Y
Sbjct: 928 GY 929
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 268/537 (49%), Gaps = 26/537 (4%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+LN R T++ WN+ + V + L L R+M+Q+ + T + +C S
Sbjct: 201 KLNHTER--TVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPS 258
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + IH +K+ + KC + A ++FD+M + V SW ++
Sbjct: 259 ALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIG 318
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G+A G E +F M+ G+ + +T + + A L K+VHS ++ G ++
Sbjct: 319 GYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHES 378
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFY 232
D++V + YAKC K VF E+L R +++WN+M+ G G ++++ Y
Sbjct: 379 DLAVGTALVKMYAKCGSYKDCRQVF----EKLVNRDLIAWNTMIGGLAEGGNWEEASEIY 434
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M G + T V LL++ V P AL GR +HS + GF D+SV N LISMY++C
Sbjct: 435 HQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARC 494
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G I AR+LF+ + + +SWTAMI G A+ G EAL +F M+ AG P+ VT S++
Sbjct: 495 GSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSIL 554
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
+ C AL+ G+ GL + V N L++MYS CGS+ DAR++F + ++ +V
Sbjct: 555 NACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIV 614
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
++ MI G A + EAL LF +L E L+P++VT++ +L AC ++G LE I +
Sbjct: 615 AYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLV 674
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
D Y + + + + G +AL M +K + W ++ C H
Sbjct: 675 LKD---GYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQH 727
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 250/487 (51%), Gaps = 32/487 (6%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAH------------KTLLLFRQMKQNDIEPNNLTF 57
L R + S+ I +N R NK +H + + + + ++Q N+ +
Sbjct: 87 LKRWFNSNGIRYFNG--RSKANKLHSHTYKDERTITGKDRAMDVVQYLQQQGARVNSCDY 144
Query: 58 PFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEM-- 101
+ K C ++ DL+ + +H HI++ + +++C ++ A ++++++
Sbjct: 145 MKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNH 204
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
R V SWNAM+VG+ Q G++E L+L M+ G+ T M L + L +
Sbjct: 205 TERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGR 264
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+H + + DV+V N ++ YAKC + A VF +E ++VVSW ++ G
Sbjct: 265 EIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKME--TKSVVSWTIIIGGYAD 322
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+ + ++ M G + T +++L++F P AL G+ VHSH ++ G + D++V
Sbjct: 323 CGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAV 382
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
L+ MY+KCG R +F+ + +R ++W MI G A+ G+ +EA ++ M+ G
Sbjct: 383 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGM 442
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
+P+ +T + +++ C AL G+ + G ++ V NALI MY++CGSI DAR
Sbjct: 443 MPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARL 502
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
LF + K ++SWT MI G A +G EAL +F + + L+PNRVT+ ++L AC+
Sbjct: 503 LFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAA 562
Query: 462 LEKGWAI 468
L+ G I
Sbjct: 563 LDWGRRI 569
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 195/388 (50%), Gaps = 4/388 (1%)
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G + + M + + I K L + VH I D N I+ Y +C ++ A
Sbjct: 136 GARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEA 195
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
V+ + RTV SWN+MV G +++L R M +G L T + LLSS
Sbjct: 196 RQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCK 255
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
P AL GR +H + DV+V N +++MY+KCG I AR +FD + ++ VSWT
Sbjct: 256 SPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTI 315
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+I GYA G + A +F M+ G +P+ +T +++++ AL+ GK ++ + G
Sbjct: 316 IIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAG 375
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+ ++ V AL+ MY+KCGS D R++F L + +++W TMI G A G + EA +++H
Sbjct: 376 HESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYH 435
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
Q+ + PN++T++ +L AC + L G I D G ++ + + + +
Sbjct: 436 QMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD-GFMFDISVQ--NALISMYA 492
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLL 523
R G +K+A M ++ D W ++
Sbjct: 493 RCGSIKDARLLFNKM-VRKDIISWTAMI 519
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/680 (32%), Positives = 344/680 (50%), Gaps = 59/680 (8%)
Query: 10 LNRIYRSSTINQ---WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK 66
+ +++R T+ W+S I N K F +MK +IEPN +TF I KAC
Sbjct: 132 VEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNN 191
Query: 67 LSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
S L ++ IH +VK+ + KC + A +IF +M R+V SW A
Sbjct: 192 YSMLEKAREIHT-VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTA 250
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
++ AQ L L+ M GI + VT + L + + L+ + +HS G
Sbjct: 251 IIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERG 310
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG---CTYGDK--FD 226
++ DV V N I+ Y KC+ ++ A F + +R V+SW++M+AG Y DK D
Sbjct: 311 LETDVVVANALITMYCKCNCIQDARETFDRMSKR--DVISWSAMIAGYAQSGYQDKESLD 368
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN--- 283
+ M G + T +S+L + AL QGR +H+ GF+ D S+
Sbjct: 369 EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIF 428
Query: 284 ----------------------------TLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
+L++MY KCGD+ SA +F + R VSW
Sbjct: 429 NMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNL 488
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
MI+GYAQ GD+ + L +M+ G PD VT++S++ CG ALE GK A G
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLG 548
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
L+ + +V +LI MYSKCG + +AR +F + + V+W M+AG +G EA+DLF
Sbjct: 549 LESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFK 608
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
++++ + PN +TF AV+ AC G +++G I I +D P HY CM DLLG
Sbjct: 609 RMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQED--FRMKPGKQHYGCMVDLLG 666
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G+L+EA +F+Q MP + D +W LL ACK H N+++ E+ A+ + +LEP +A+ YV
Sbjct: 667 RAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVT 726
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
++N YA GRWD +R +M +KK G+S I+G+ TF AED H E + +
Sbjct: 727 LSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAE 786
Query: 616 LDCLALHSREEAYSSHLKWI 635
L+ L +E Y+ ++++
Sbjct: 787 LEMLTKEMKEAGYTPDMRFV 806
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 229/471 (48%), Gaps = 52/471 (11%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--------------GHIVKSPFVKCDR 90
+KQ + N+ T+ I + CAKL +M+H G+ + + + K
Sbjct: 69 IKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGD 128
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ ++F M +RDV +W++M+ +A F M+ I+ + +T + + +A
Sbjct: 129 VASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKA 188
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ L + +H+ G++ DV+V I+ Y+KC ++ +A +F ++E R VV
Sbjct: 189 CNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKE--RNVV 246
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW +++ K +++ Y M+ G + T VSLL+S PEAL +GR +HSH
Sbjct: 247 SWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI 306
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG-----D 325
G + DV V N LI+MY KC I AR FD + R +SW+AMI+GYAQ G
Sbjct: 307 SERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKES 366
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW------------------- 366
LDE +L M G P+ VT +S++ C GALE G+
Sbjct: 367 LDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTA 426
Query: 367 -FDNYACSGGLKD-----------NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
F+ YA G + + NV+ +L+ MY KCG + A ++F + + VVSW
Sbjct: 427 IFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSW 486
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
MIAG A +G+ + +L + +P+RVT +++L+AC LE+G
Sbjct: 487 NLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG 537
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 210/411 (51%), Gaps = 11/411 (2%)
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
+ G L+ ++L ++ G+ + T + + + K VH +G+ D+
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ N+ I+ Y+K D+ E VF + LR VV+W+SM+A + + + + M
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMT--LRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ T +S+L + L + R +H+ G + DV+V LI+MYSKCG+I
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +F + +R VSWTA+I AQ L+EA L+ M AG P+ VT +S+++ C
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
AL G+ ++ GL+ +V+V NALI MY KC I DARE F + ++ V+SW+ M
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352
Query: 418 IAGCALNG-EFVEALDLFHQLMELDLR----PNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
IAG A +G + E+LD QL+E R PN+VTF+++L+AC+ G LE+G I
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ---IH 409
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + + + + + ++ + G + EA M K+ W +LL
Sbjct: 410 AEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVA-WASLL 459
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/635 (34%), Positives = 332/635 (52%), Gaps = 23/635 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
++++R I+ +NS I + + + L LF +M+ + ++P+ +T + ACA +
Sbjct: 271 FSKMHRRDRIS-YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGA 329
Query: 70 LIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ +H +++K +VKC ++ A++ F +V WN MLV
Sbjct: 330 GYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVA 389
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ Q+G L +F M++ G+ + T + + L L + +H+ I G +
Sbjct: 390 YGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN 449
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRT--VVSWNSMVAGCTYGDKFDDSLNFYR 233
V VC+ I YAK +L A GI +RLR VVSW +M+AG T D F ++L ++
Sbjct: 450 VYVCSVLIDMYAKHGELDTAR----GILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQ 505
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M G R D S +S+ +AL QG+ +H+ G+ D+S+ N L+S+Y++CG
Sbjct: 506 EMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCG 565
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
A + F+ I + +SW A+ISG+AQ G +EAL++F M AG +L T S +S
Sbjct: 566 RAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVS 625
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
+ ++ GK G N LI +YSKCGSI DA+ F+ +PEK VVS
Sbjct: 626 ATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVS 685
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W MI G + +G EA+ LF ++ +L L PN VTF+ VL AC+H G + +G +
Sbjct: 686 WNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMS 745
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ G+ PE HY C+ DLLGR L A +F++ MPI+ DA IW TLL AC +H NIE
Sbjct: 746 KEHGLVPKPE--HYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIE 803
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
IGE+ A L +LEP +A YV ++N YA+ G+WD R MMK VKK PG+S +
Sbjct: 804 IGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVK 863
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F DR H +E Y +D L + E Y
Sbjct: 864 NSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGY 898
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 247/534 (46%), Gaps = 21/534 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
R++ +++ W + I + +LLF QM ++ + P F + AC K+
Sbjct: 170 FERLFLKDSVS-WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIEL 228
Query: 70 LIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ +HG IVK + + + L A +IF +M RD S+N+++ G
Sbjct: 229 FKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISG 288
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
AQ GF + L+LF M+L ++ D VTV L A K +HS+ I +G+ +D
Sbjct: 289 LAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSD 348
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ + + + Y KC D++ A F E VV WN M+ +S + M
Sbjct: 349 LIIEGSLLDLYVKCFDIETAHEYFLTTET--ENVVLWNVMLVAYGQLGNLSESYWIFLQM 406
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G + T S+L + AL G +H+ I GF +V V + LI MY+K G++
Sbjct: 407 QIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGEL 466
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
D+AR + + + VSWTAMI+GY Q EAL+LF ME G D + S IS C
Sbjct: 467 DTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISAC 526
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL G+ + G +++ + NAL+ +Y++CG DA F + K +SW
Sbjct: 527 AGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWN 586
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+I+G A +G EAL +F Q+ + + N TF + + A +T +++G I +
Sbjct: 587 ALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIK- 645
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
Y+ E + + + L + G +++A MP K+ W ++ H
Sbjct: 646 --TGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVS-WNAMITGYSQH 696
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 234/504 (46%), Gaps = 29/504 (5%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRL------------- 91
M++ I N T+ ++ + C L+ ++ +H I KS F D L
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 92 -DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
D A K+FD++ +V+ WN ++ G VL LF M + D T + +A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 151 AIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--R 207
K + + +H+ IH G + VCN I Y+K + +A+LVF ERL +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVF----ERLFLK 176
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VSW +M++G + + D+++ + M + S+LS+ E G +H
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ +G + V N L+++YS+ G++ +A +F + R R+S+ ++ISG AQ+G D
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
AL+LF M+ PD VTV S++S C GA GK +Y G+ ++++ +L+
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
D+Y KC I A E F + VV W M+ G E+ +F Q+ L PN+
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALD 505
T+ ++L+ CT G L+ G I Q G +N Y C + D+ + G+L A
Sbjct: 417 TYPSILRTCTSLGALDLGEQIH-TQVIKSGFQFNV----YVCSVLIDMYAKHGELDTARG 471
Query: 506 FVQSMPIKSDAGIWGTLLCACKIH 529
+Q + + D W ++ H
Sbjct: 472 ILQRLR-EEDVVSWTAMIAGYTQH 494
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/628 (32%), Positives = 343/628 (54%), Gaps = 19/628 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + E +++ LF++M++ + N TF + K A L + + +HG+++
Sbjct: 438 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 497
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + K ++ A+ +FDE++ DV SWN+M+ G GF N L
Sbjct: 498 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 557
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M ++G++ D T++ + A + +LSL +++H FG+ +V NT + Y+
Sbjct: 558 IFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 617
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +L A VF + + T+VSW S +A + D++ + M G R D+ TV
Sbjct: 618 KCGNLNGATEVFVKMGDT--TIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 675
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S++ + C +L +GR VHS+ I G ++ V N LI+MY+KCG ++ AR++F I
Sbjct: 676 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 735
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW MI GY+Q +EAL LF M+ + PD +T+ ++ C AL+ G+
Sbjct: 736 KDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREI 794
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G ++ V AL+DMY+KCG + A+ LF +P+K ++SWT MIAG ++G
Sbjct: 795 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 854
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EA+ F+++ + P+ +F +L AC+H+G L +GW ++ G+ P+L+HY
Sbjct: 855 NEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVE--PKLEHY 912
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R G L +A F++SMPIK D IWG LL C+IH ++++ E VA +F+LEP
Sbjct: 913 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 972
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ YV +AN YA +W+ V +R M++ K+ PG S + GK F A + H
Sbjct: 973 DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHP 1032
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWI 635
+++ +L L + + E Y S +++
Sbjct: 1033 QAKRIDVLLRKLTMQMQNEDYFSMFRYV 1060
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 243/477 (50%), Gaps = 20/477 (4%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
+ P S T NQ N++I + + + L + K ++ N ++ + + CA
Sbjct: 324 VSPSFTNTTHSVTQNQ-NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCA 380
Query: 66 KLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
+ L + +H I+ + +V C L KIFD++ V WN
Sbjct: 381 EKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNL 440
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
++ +A++G + LF M+ +G+ + T + + + K VH + + +G
Sbjct: 441 LMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 500
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
++ +V N+ I++Y K ++ A +F + E VVSWNSM+ GC + L
Sbjct: 501 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP--DVVSWNSMINGCVVNGFSGNGLEI 558
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ M+ G +D+TT+VS+L ++ L GR +H G+ F +V NTL+ MYSK
Sbjct: 559 FIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 618
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG+++ A +F + D T VSWT+ I+ Y ++G +A+ LF M++ G PD+ TV S+
Sbjct: 619 CGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 678
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C S +L+ G+ +Y G+ N+ V NALI+MY+KCGS+ +AR +F +P K +
Sbjct: 679 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 738
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
VSW TMI G + N EAL+LF M+ +P+ +T VL AC L+KG I
Sbjct: 739 VSWNTMIGGYSQNSLPNEALELFLD-MQKQFKPDDITMACVLPACAGLAALDKGREI 794
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/593 (34%), Positives = 315/593 (53%), Gaps = 18/593 (3%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMA 102
F + + CA+L L + +H I+KS + KC L A ++FD +
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
R++ SW AM+ F + + M+L G + D VT + L A + + L + +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH G++ + V + + YAKC D+ A+++F + E+ VV+W ++AG
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEK--NVVTWTLLIAGYAQQ 276
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ D +L M + T S+L P AL G+ VH + I G+ ++ V+
Sbjct: 277 GQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVV 336
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N LI+MY KCG + AR LF + R V+WTAM++GYAQ G DEA+ LF M+ G
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
PD +T S ++ C L+ GK G +V + +AL+ MY+KCGS+ DAR +
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + E+ VV+WT MI GCA +G EAL+ F Q+ + ++P++VTF +VL ACTH G +
Sbjct: 457 FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLV 516
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
E+G Y D GI P ++HYSC DLLGR G L+EA + + +MP + +WG L
Sbjct: 517 EEGRKHFRSMYLDYGI--KPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L AC+IH ++E GE A + KL+P YV ++N YA GR++ +R +M++ V
Sbjct: 575 LSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
K PGQS ++GK F ED+ H E++ Y L L +E+ Y +++
Sbjct: 635 KEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFV 687
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 226/440 (51%), Gaps = 33/440 (7%)
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
+ G L+ L + M L G + GL Q + L + VH+ + G+ +
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ NT +S YAKC L A VF GI R R +VSW +M+ G++ ++ Y M
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGI--RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL 190
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G + D T VSLL++F PE L G+ VH G +L+ V +L+ MY+KCGDI
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISK 250
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A+V+FD + ++ V+WT +I+GYAQ+G +D AL L M+ A P+ +T S++ GC
Sbjct: 251 AQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTT 310
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE GK Y G + V NALI MY KCG + +AR+LF LP + VV+WT M
Sbjct: 311 PLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAM 370
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--------- 468
+ G A G EA+DLF ++ + ++P+++TF + L +C+ FL++G +I
Sbjct: 371 VTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY 430
Query: 469 SIIQY---------------DDKGISYNPELDH----YSCMADLLGRKGKLKEALDFVQS 509
S+ Y DD + +N + ++ M + G+ +EAL++ +
Sbjct: 431 SLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQ 490
Query: 510 MP---IKSDAGIWGTLLCAC 526
M IK D + ++L AC
Sbjct: 491 MKKQGIKPDKVTFTSVLSAC 510
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 210/443 (47%), Gaps = 18/443 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R I W + I V N+ + + MK +P+ +TF + A L Q
Sbjct: 158 RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQ 217
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H I K+ + KC + A IFD++ ++V +W ++ G+AQ G
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
++ L L M+ + + +T + Q L K VH + I G ++ V N
Sbjct: 278 QVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVN 337
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I+ Y KC LK A +F + R VV+W +MV G D++++ +R M G
Sbjct: 338 ALITMYCKCGGLKEARKLFGDLPH--RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGI 395
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D T S L+S P L +G+ +H +H G+ LDV + + L+SMY+KCG +D AR+
Sbjct: 396 KPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARL 455
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + +R V+WTAMI+G AQ G EAL F M+ G PD VT S++S C G
Sbjct: 456 VFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGL 515
Query: 361 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMI 418
+E G K F + G+K V + +D+ + G + +A + +P + S W ++
Sbjct: 516 VEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALL 575
Query: 419 AGCALNGEFVEALDLFHQLMELD 441
+ C ++ + +++LD
Sbjct: 576 SACRIHSDVERGERAAENVLKLD 598
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 320/606 (52%), Gaps = 18/606 (2%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----------- 85
K L F +M+ +D+EP F ++ K C ++L + IHG +VKS F
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 86 ---VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
KC +++ A K+FD M RD+ SWN ++ G++Q G L + +M ++ F+
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T++ + A + +S+ K +H + + G D+ V++ + YAKC L+ A +F G+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
ER VVSWNSM+ + +++ ++ M+ G + +V+ L + L +
Sbjct: 298 LER--NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H + G D +VSV+N+LISMY KC ++D+A +F + RT VSW AMI G+AQ
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +AL F M + PD T +S+I+ + KW L NV V
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 475
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+DMY+KCG+I AR +F + E+ V +W MI G +G AL+LF ++ + +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+PN VTFL+V+ AC+H+G +E G + ++ I + +DHY M DLLGR G+L E
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS--MDHYGAMVDLLGRAGRLNE 593
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A DF+ MP+K ++G +L AC+IH N+ E A LF+L P +V +AN Y
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRA 653
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
W+ V +R M R ++K PG S+ I + +F + H +S+ Y L+ L H
Sbjct: 654 ASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICH 713
Query: 623 SREEAY 628
+E Y
Sbjct: 714 IKEAGY 719
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 216/453 (47%), Gaps = 20/453 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFP--FIAKACAKLSDL--- 70
SS + Q+ S + + N H+ L ++N I N P + + C+ L +L
Sbjct: 2 SSQLVQF-STVPQIPNPPSRHRHFL----SERNYIPANVYEHPAALLLERCSSLKELRQI 56
Query: 71 --------IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
+Y + + S F + +D A ++F+ + + ++ ML GFA++ L
Sbjct: 57 LPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDL 116
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L+ F MR ++ L + L + K +H + G D+
Sbjct: 117 DKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGL 176
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAKC + A VF + E R +VSWN++VAG + +L + M +
Sbjct: 177 ENMYAKCRQVNEARKVFDRMPE--RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T+VS+L + + G+ +H + + GFD V++ L+ MY+KCG +++AR LF
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DG+ +R VSW +MI Y Q + EA+ +F M G P V+V+ + C G LE
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G++ + GL NV V N+LI MY KC + A +F L + +VSW MI G A
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
NG ++AL+ F Q+ ++P+ T+++V+ A
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 121/241 (50%), Gaps = 4/241 (1%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+S++ + G +D A +F+ I + V + M+ G+A+ DLD+AL+ F M P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ ++ CG L +GK G ++ L +MY+KC + +AR++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+PE+ +VSW T++AG + NG AL++ + E +L+P+ +T ++VL A + +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G I Y + ++ ++ + + D+ + G L+ A M ++ + W +++
Sbjct: 255 GKEIH--GYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMID 310
Query: 525 A 525
A
Sbjct: 311 A 311
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S T+ WN+ I L F QM+ ++P+ T+ + A A+LS +++
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 75 MIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG +++S + KC + A IFD M+ R V +WNAM+ G+ G
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
F + L LF M+ I+ + VT + + A H+
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/604 (34%), Positives = 319/604 (52%), Gaps = 22/604 (3%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------V 86
F +M+ + + P F ++ K C +DL + IH ++ + F
Sbjct: 162 FFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYA 221
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC ++ AYK+FD M RD+ WN ++ G+AQ GF + L L M+ G + D +T++
Sbjct: 222 KCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVS 281
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ A L + +S+H + + G ++ V+V + Y+KC + A L+F +R+
Sbjct: 282 ILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIF----DRM 337
Query: 207 --RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+TVVSWNSM+ G ++ ++ MM + TV+ L + + QGR
Sbjct: 338 TGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH DVSV+N+LISMYSKC +D A +F+ + +T VSW AMI GYAQ G
Sbjct: 398 FVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNG 457
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
++EA+ F M+ PD T++S+I + L KW L NV V
Sbjct: 458 RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVAT 517
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
AL+DMY+KCG++ AR+LF + E+ V +W MI G +G AL+LF ++ + ++P
Sbjct: 518 ALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKP 577
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
N VTFL VL AC+H+G +E+G+ D G+ P +DHY M DLLGR +L EA
Sbjct: 578 NEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLE--PAMDHYGAMVDLLGRANRLNEAW 635
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
DF+Q MPI+ ++G +L AC+IH N+E+GE A +F L+P +V +AN YA
Sbjct: 636 DFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATAS 695
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
WD VA +RT M++ ++K PG S+ + + TF + H +++ Y L+ L +
Sbjct: 696 MWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIK 755
Query: 625 EEAY 628
Y
Sbjct: 756 AAGY 759
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 192/395 (48%), Gaps = 2/395 (0%)
Query: 71 IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+YS+ + + S F K L A ++F + + ++ ML G+A+ L++ + F
Sbjct: 105 LYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFC 164
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
MR G++ L + L K +H I G ++V ++ YAKC
Sbjct: 165 RMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCR 224
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
++ A +F + E R +V WN++++G +L M G R D T+VS+
Sbjct: 225 LVEEAYKMFDRMPE--RDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSI 282
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L + +L GR +H + + GF+ V+V L+ MYSKCG + +AR++FD + +T
Sbjct: 283 LPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTV 342
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW +MI GY Q GD A+ +F M VTV+ + C G +E G++
Sbjct: 343 VSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKL 402
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
L +V V N+LI MYSKC + A E+F L K +VSW MI G A NG EA
Sbjct: 403 LDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEA 462
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+D F ++ +++P+ T ++V+ A L +
Sbjct: 463 IDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQA 497
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+S++ K G + A +F I D+ + M+ GYA+ LD+A+ F M G P
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPV 174
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ ++ CG + L GK G NV +++MY+KC + +A ++F
Sbjct: 175 VYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFD 234
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+PE+ +V W T+I+G A NG AL+L ++ E RP+ +T +++L A G L
Sbjct: 235 RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 465 GWAI 468
G +I
Sbjct: 295 GRSI 298
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS I V + + +F++M +E N+T ACA L D+ + +H
Sbjct: 341 TVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVH 400
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + S + KC R+D A +IF+ + + + SWNAM++G+AQ G +
Sbjct: 401 KLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRIN 460
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ F M+L I+ D T++ + A L K +H I +D +V V +
Sbjct: 461 EAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALV 520
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + A +F ++E R V +WN+M+ G +L + M + +
Sbjct: 521 DMYAKCGAVHTARKLFDMMDE--RHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPN 578
Query: 244 VTTVVSLLSS 253
T + +LS+
Sbjct: 579 EVTFLCVLSA 588
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL + L+ ++ K GS+ +A +F + +KI + TM+ G A N +A+ F
Sbjct: 104 GLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFF 163
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++ +RP F +L+ C L KG I
Sbjct: 164 CRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEI 197
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/627 (33%), Positives = 328/627 (52%), Gaps = 18/627 (2%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ T+ WN+ I + LFRQM +EP+ +TF + AC+ + L +
Sbjct: 124 NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKE 183
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H ++K S +VK +D A ++FD + RDV+++N M+ G+A+ G
Sbjct: 184 FHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGD 243
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E +LFY M+ G + + ++ + + + L+ K+VH+ ++ G+ DV V
Sbjct: 244 GEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATA 303
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I Y C ++ A VF + ++R VVSW M+ G +D+ + M G +
Sbjct: 304 LIRMYMGCGSIEGARRVFDKM--KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQ 361
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T + ++++ L R +HS + GF D+ V L+ MY+KCG I AR +
Sbjct: 362 PDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQV 421
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + R VSW+AMI Y + G +EA F M+ PD+VT +++++ CG GAL
Sbjct: 422 FDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGAL 481
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+LG A L ++ V NALI+M K GSI AR +F + ++ VV+W MI G
Sbjct: 482 DLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGY 541
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+L+G EALDLF ++++ RPN VTF+ VL AC+ GF+E+G D +GI
Sbjct: 542 SLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIV-- 599
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++ Y CM DLLGR G+L EA + MP+K ++ IW TLL AC+I+ N+++ E A
Sbjct: 600 PTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAER 659
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
EP+ A YV++++ YA G W+ VA +R +M+ V+K G + + GK TF
Sbjct: 660 CLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVV 719
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
EDR H ++ Y L L + E Y
Sbjct: 720 EDRSHPQAGEIYAELARLMTAIKREGY 746
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 241/493 (48%), Gaps = 20/493 (4%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKS----------PFVK----CDRLDCAYKIF 98
++ T+ + + C L D + + HI++S +K C + A + F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D + + V +WNA++ G+AQ+G ++ LF M ++ +T + + A L
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
L K H+ I +G +D + +S Y K + A VF G+ + R V ++N M+ G
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYK--RDVSTFNVMIGG 237
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ + + M GF+ + + +S+L PEAL G+ VH+ ++ G D
Sbjct: 238 YAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V V LI MY CG I+ AR +FD + R VSWT MI GYA+ ++++A LF M+
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G PD +T + +I+ C S L L + + G +++V AL+ MY+KCG+I D
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
AR++F A+ + VVSW+ MI NG EA + FH + ++ P+ VT++ +L AC H
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
G L+ G I +S+ P + + ++ + G ++ A ++M ++ D
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIPVGN---ALINMNVKHGSIERARYIFENM-VQRDVVT 533
Query: 519 WGTLLCACKIHLN 531
W ++ +H N
Sbjct: 534 WNVMIGGYSLHGN 546
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 122/227 (53%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D T V L + G+ V H I G L++ +NTLI ++S CG++ AR
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + ++T V+W A+I+GYAQ G + EA LF M P ++T L ++ C L
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+LGK F G + + AL+ MY K GS+ AR++F L ++ V ++ MI G
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A +G+ +A LF+++ + +PNR++FL++L C+ L G A+
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAV 285
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 319/579 (55%), Gaps = 19/579 (3%)
Query: 64 CAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASW 109
C + DL + IHG I+ + F KC ++D AYK+F+ M +D+ SW
Sbjct: 155 CGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSW 214
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
++ G+AQ G + L+L M+ G + D VT++ + A K L + +S+H +
Sbjct: 215 TTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFR 274
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G ++ V+V N + Y KC ++A LVF G+ R +TVVSWN+M+ GC + +++
Sbjct: 275 SGFESLVNVTNALLDMYFKCGSARIARLVFKGM--RSKTVVSWNTMIDGCAQNGESEEAF 332
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M+ G T++ +L + L +G VH D +VSV+N+LISMY
Sbjct: 333 ATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMY 392
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
SKC +D A +F+ + ++T V+W AMI GYAQ G + EAL LF M++ G D T++
Sbjct: 393 SKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLV 451
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+I+ KW A + +NV V AL+DMY+KCG+I AR+LF + E+
Sbjct: 452 GVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQER 511
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
V++W MI G +G E LDLF+++ + ++PN +TFL+V+ AC+H+GF+E+G +
Sbjct: 512 HVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLF 571
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+D + P +DHYS M DLLGR G+L +A +F+Q MPIK + G +L ACKIH
Sbjct: 572 KSMQEDYYLE--PTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIH 629
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+E+GE A LFKL+P +V +AN YA WD VA +RT M+ + K PG S
Sbjct: 630 KNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSW 689
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ + TF + H ES+ Y L+ L + Y
Sbjct: 690 VELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGY 728
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 159/288 (55%), Gaps = 6/288 (2%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
IS + K A VF +E L+ V ++ M+ G D+L F+ MM + RL
Sbjct: 86 ISLFCKFGSNSEAARVFEHVE--LKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRL 143
Query: 243 DVTTVVSLLSSFVCPEAL--VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
V LL +C E L +GR +H I GF+ ++ V+ ++S+Y+KC ID+A
Sbjct: 144 VVGDYACLLQ--LCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYK 201
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + + VSWT +++GYAQ G AL+L M+ AG+ PD VT++S++ A
Sbjct: 202 MFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKA 261
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L +G+ YA G + V V NAL+DMY KCGS AR +F + K VVSW TMI G
Sbjct: 262 LRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDG 321
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
CA NGE EA F ++++ P RVT + VL AC + G LE+GW +
Sbjct: 322 CAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFV 369
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 214/477 (44%), Gaps = 21/477 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + A + L L QM++ +P+++T I A A + L + IHG+
Sbjct: 214 WTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAF 273
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S F KC A +F M + V SWN M+ G AQ G E
Sbjct: 274 RSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFA 333
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M G VT+MG+ A + L VH + +D++VSV N+ IS Y+
Sbjct: 334 TFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYS 393
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + +A +F +E +T V+WN+M+ G ++LN + M G +LD T+
Sbjct: 394 KCKRVDIAASIFNNLE---KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTL 450
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V ++++ Q + +H + D +V V L+ MY+KCG I +AR LFD + +
Sbjct: 451 VGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQE 510
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
R ++W AMI GY G E L LF M+ P+ +T LS+IS C SG +E G
Sbjct: 511 RHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLL 570
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNG 425
F + L+ + +A++D+ + G + DA +P K +S M+ C ++
Sbjct: 571 FKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHK 630
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+L +LD P+ + +L + + A +DKG+ P
Sbjct: 631 NVELGEKAAQKLFKLD--PDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTP 685
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 196/406 (48%), Gaps = 23/406 (5%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
PFI K + Y++ + V S F K A ++F+ + ++ ++ ML G+
Sbjct: 67 LPFIIK------NGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGY 120
Query: 117 AQMGFLENVLRLFYNM-----RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
A+ L + L F M RLV D+ ++ L + K + +H I G
Sbjct: 121 AKNSSLGDALCFFLRMMCDEVRLV--VGDYACLLQLCGENLDLKK---GREIHGLIITNG 175
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSL 229
++++ V +S YAKC + A +F ER+ + +VSW ++VAG +L
Sbjct: 176 FESNLFVMTAVMSLYAKCRQIDNAYKMF----ERMQHKDLVSWTTLVAGYAQNGHAKRAL 231
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
M G + D T+VS+L + +AL GR +H + GF+ V+V N L+ MY
Sbjct: 232 QLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMY 291
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
KCG AR++F G+ +T VSW MI G AQ G+ +EA F M GE+P VT++
Sbjct: 292 FKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMM 351
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
++ C G LE G + L NV V N+LI MYSKC + A +F L EK
Sbjct: 352 GVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EK 410
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
V+W MI G A NG EAL+LF + ++ + T + V+ A
Sbjct: 411 TNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITA 456
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
RS T+ WN+ I E+ + F +M P +T + ACA L DL
Sbjct: 308 RSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW 367
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H + K S + KC R+D A IF+ + +V +WNAM++G+AQ G
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNG 426
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
++ L LF M+ GI+ D T++G+ A K +H + +D +V V
Sbjct: 427 CVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVST 486
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ YAKC +K A +F ++E R V++WN+M+ G ++L+ + M
Sbjct: 487 ALVDMYAKCGAIKTARKLFDMMQE--RHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAV 544
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLV-HSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ + T +S++S+ + +G L+ S Y + + + ++ + + G +D A
Sbjct: 545 KPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDA 603
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/629 (32%), Positives = 333/629 (52%), Gaps = 21/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W S I + LF++M++ ++P+ + F + +AC L + +H
Sbjct: 280 WTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK 339
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + S + KC ++ A ++FD + R+V SW AM+ GFAQ G ++
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M GI+ + VT M + A L + + I G +D V +S YA
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC LK A VF I ++ VV+WN+M+ +++D++L ++ ++ G + + +T
Sbjct: 460 KCGSLKDAHRVFEKISKQ--NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTF 517
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L+ ++L G+ VH + G + D+ V N L+SM+ CGD+ SA+ LF+ +
Sbjct: 518 TSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPK 577
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW +I+G+ Q G A F M+ +G PD +T +++ C AL G+
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRL 637
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+V+V LI MY+KCGSI DA ++F+ LP+K V SWT+MIAG A +G
Sbjct: 638 HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRG 697
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD-KGISYNPELDH 486
EAL+LF+Q+ + ++P+ +TF+ L AC H G +E+G + + K + P ++H
Sbjct: 698 KEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG----LHHFQSMKEFNIEPRMEH 753
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y CM DL GR G L EA++F+ M ++ D+ +WG LL AC++HLN+E+ E A +L+
Sbjct: 754 YGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELD 813
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+ +V ++N YA G W VA +R +M V K PGQS ++GK TF ++D+ H
Sbjct: 814 PNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTH 873
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKWI 635
++E + L+ L + R+ Y +++
Sbjct: 874 PQTEEIHAELERLHMEMRQLGYVPDTRYV 902
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 235/465 (50%), Gaps = 16/465 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + WN + V + L QM Q+ ++P+ TF + ACA ++ +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++ I+K+ + +KC + A K+FD + RD+ +W +M+ G A+ G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ LF M G+Q D V + L +A H + L K VH+ +G D ++ V
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+S Y KC ++ A VF + + R VVSW +M+AG + D++ F+ M+ +G
Sbjct: 352 AILSMYTKCGSMEDALEVFDLV--KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ T +S+L + P AL +G+ + H I G+ D V L+SMY+KCG + A
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ I + V+W AMI+ Y Q D AL F A+ G P+ T S+++ C S +
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LELGKW GL+ ++ V NAL+ M+ CG + A+ LF +P++ +VSW T+IAG
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+G+ A D F + E ++P+++TF +L AC L +G
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 265/556 (47%), Gaps = 42/556 (7%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
LNR+ ++ N+ Q+ E V+ + + ++RQ T+ + + C K +
Sbjct: 82 LNRLSKAGQFNE-AMQVLERVDSSH----IQIYRQ-----------TYSALLQLCIKFKN 125
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + I+ HI KS + KC A +IFD+M +DV SWN +L G
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ Q G E +L M ++ D T + + A A+++ + +++ + G D D
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V I+ + KC D+ A VF + R +V+W SM+ G +F + N ++ M
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLP--TRDLVTWTSMITGLARHGRFKQACNLFQRM 303
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G + D VSLL + PEAL QG+ VH+ G+D ++ V ++SMY+KCG +
Sbjct: 304 EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSM 363
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ A +FD + R VSWTAMI+G+AQ G +DEA F M +G P+ VT +S++ C
Sbjct: 364 EDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL+ G+ ++ G + V AL+ MY+KCGS+ DA +F + ++ VV+W
Sbjct: 424 SSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWN 483
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYD 474
MI + ++ AL F L++ ++PN TF ++L C + LE G W +I
Sbjct: 484 AMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIM-- 541
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+L + + + G L A + MP K D W T++ H +
Sbjct: 542 --KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQ- 597
Query: 535 GEYVAYCLFKLEPHSA 550
VA+ FK+ S
Sbjct: 598 ---VAFDYFKMMQESG 610
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 219/452 (48%), Gaps = 21/452 (4%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ + + W + I + L F +M ++ IEPN +TF I AC+ S L
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 73 SQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
Q I HI++ S + KC L A+++F++++ ++V +WNAM+ + Q
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
+N L F + GI+ + T + + L L K VH + G+++D+ V
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHV 551
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N +S + C DL A+ +F + + R +VSWN+++AG K + ++++ M +
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMPK--RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + D T LL++ PEAL +GR +H+ FD DV V LISMY+KCG I+ A
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDA 669
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F + + SWT+MI+GYAQ G EAL LF+ M+ G PD +T + +S C +
Sbjct: 670 HQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHA 729
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWT 415
G +E G ++ + ++D++ + G + +A E + P+ V W
Sbjct: 730 GLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRV--WG 787
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
++ C ++ A + +ELD N V
Sbjct: 788 ALLGACQVHLNVELAEKAAQKKLELDPNDNGV 819
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 217/429 (50%), Gaps = 10/429 (2%)
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
++D NA+L ++ G +++ + IQ T L Q I K+L +
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+++ GV D+ + NT I+ YAKC + A+ +F + E + V SWN ++ G
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMRE--KDVYSWNLLLGGYVQH 189
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
++++ + M+ + + D T VS+L++ + +GR +++ + G+D D+ V
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
LI+M+ KCGDI A +FD + R V+WT+MI+G A+ G +A LF ME G
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
PD V +S++ C ALE GK G + V A++ MY+KCGS+ DA E+
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + + VVSWT MIAG A +G EA F++++E + PNRVTF+++L AC+ L
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429
Query: 463 EKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
++G I II+ Y + + + + + G LK+A + + K + W
Sbjct: 430 KRGQQIQDHIIE-----AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWN 483
Query: 521 TLLCACKIH 529
++ A H
Sbjct: 484 AMITAYVQH 492
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 178/335 (53%), Gaps = 11/335 (3%)
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVV--------SWNSMVAGCTYGDKFDDSLN 230
C++ + ++ + L+M F G + R VV N+++ + +F++++
Sbjct: 37 CSSCVPTHEGIETLRMLTTSFSGRCPKGRCVVFADIKDTQKANAVLNRLSKAGQFNEAMQ 96
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ + ++ T +LL + + L G +++H G D+ + NTLI+MY+
Sbjct: 97 VLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYA 156
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
KCG+ SA+ +FD + ++ SW ++ GY Q G +EA +L M PD T +S
Sbjct: 157 KCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVS 216
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
M++ C + ++ G+ N G ++ V ALI+M+ KCG IGDA ++F LP +
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
+V+WT+MI G A +G F +A +LF ++ E ++P++V F+++L+AC H LE+G
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG---KK 333
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+ K + ++ E+ + + + + G +++AL+
Sbjct: 334 VHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 220/642 (34%), Positives = 341/642 (53%), Gaps = 23/642 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMI 76
++ WNS +R + + +TL LF M E P+N T P KACA L L ++I
Sbjct: 66 NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125
Query: 77 HGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
HG K+ + KC ++ A K+F+E D W +M+ G+ Q
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185
Query: 122 LENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
E L LF M ++ + D VT++ + A ++ VH I D D+ + N
Sbjct: 186 PEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN 245
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ ++ YAK K+A +F + E+ V+SW++M+A + +++LN + M+ F
Sbjct: 246 SLLNLYAKTGCEKIAANLFSKMPEK--DVISWSTMIACYANNEAANEALNLFHEMIEKRF 303
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ TVVS L + L +G+ +H + GF+LD SV LI MY KC D A
Sbjct: 304 EPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVD 363
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LF + + VSW A++SGYAQ G +++ +F M + G PD V V+ +++ + G
Sbjct: 364 LFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI 423
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+ Y G NV V +LI++YSKCGS+GDA +LF + + VV W++MIA
Sbjct: 424 FQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAA 483
Query: 421 CALNGEFVEALDLFHQLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
++G EAL++F Q+++ +RPN VTFL++L AC+H G +E+G I D +
Sbjct: 484 YGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQL- 542
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P+ +H+ M DLLGR G+L +A+D + MPI + +WG LL AC+IH NIE+GE A
Sbjct: 543 -RPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAA 601
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF L+P A Y+ ++N YA+ G+WD VA +RT +K +KK GQS+ + G +F
Sbjct: 602 KNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSF 661
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHEAG 641
A DR+H +S+ Y +L L +E Y L ++ H+ G
Sbjct: 662 LASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLL-HDTG 702
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 267/480 (55%), Gaps = 10/480 (2%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
S LK H+ G+ D + + Y + + A +VF I + WN M+
Sbjct: 733 FSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFL--WNVMI 790
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G +F SL Y MM G + D L S L +G+++H H + G
Sbjct: 791 RGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCS 850
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
D+ V L+ MY+KCGDI++AR++FD + R VSWT+MISGYA G E L F M
Sbjct: 851 NDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLM 910
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
++G +P+ V++LS++ CG GAL G+WF +Y G + +++V A++DMYSKCGS+
Sbjct: 911 RSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSL 970
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
AR LF K +V W+ MIA ++G +A+DLF Q+++ +RP+ VTF VL AC
Sbjct: 971 DLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC 1030
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+H+G LE+G + ++ I+ +L +Y+CM DLLGR G+L EA+D +++MP++ DA
Sbjct: 1031 SHSGLLEEGKMYFQLMTEEFVIAR--KLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDA 1088
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
IWG+LL AC+IH N+++ E +A LF L+P A +V ++N YA RW+ V +R MM
Sbjct: 1089 SIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMM 1148
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIP 636
R K G SL + + F DR H + E Y L+ LA A HL ++P
Sbjct: 1149 ARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELA------APMKHLGYVP 1202
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 226/453 (49%), Gaps = 11/453 (2%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA- 139
+ S + KC L A K+FDE +V WN+ L + + E LRLF+ M +A
Sbjct: 42 LNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAP 101
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFG-IHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D T+ +A + L L K +H F + + +D+ V + + Y+KC + A V
Sbjct: 102 DNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKV 161
Query: 199 FCGIEERLRT-VVSWNSMVAGCTYGDKFDDSLNFYRHM-MYNGFRLDVTTVVSLLSSFVC 256
F EE R V W SMV G + +++L + M M + LD T+VS++S+
Sbjct: 162 F---EEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQ 218
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
+ G VH I FD D+ ++N+L+++Y+K G A LF + ++ +SW+ M
Sbjct: 219 LLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTM 278
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I+ YA +EAL LF M P+ VTV+S + C S LE GK A G
Sbjct: 279 IACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGF 338
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ + V ALIDMY KC +A +LF LP+K VVSW +++G A NG +++ +F
Sbjct: 339 ELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRN 398
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
++ ++P+ V + +L A + G ++ A+ + Y + +N + + + +L +
Sbjct: 399 MLSDGIQPDAVAVVKILAASSELGIFQQ--ALCLHGYVVRS-GFNSNVFVGASLIELYSK 455
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G L +A+ + M ++ D IW +++ A IH
Sbjct: 456 CGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIH 487
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 182/386 (47%), Gaps = 16/386 (4%)
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
++ L QA + + +S L HS G+ D S YAKC L+ A VF
Sbjct: 6 VLVDLFQACNNGRSVSQL---HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF--D 60
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALV 261
E V WNS + +++++L + M+ G D T+ L + L
Sbjct: 61 ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120
Query: 262 QGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G+++H D+ V + L+ +YSKCG + A +F+ V WT+M++GY
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY 180
Query: 321 AQKGDLDEALRLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Q D +EAL LF M + D VT++S++S C Q ++ G +
Sbjct: 181 QQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGD 240
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ + N+L+++Y+K G A LF +PEK V+SW+TMIA A N EAL+LFH+++E
Sbjct: 241 LPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIE 300
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH--YSCMADLLGRK 497
PN VT ++ LQAC + LE+G I I + ELD + + D+ +
Sbjct: 301 KRFEPNSVTVVSALQACAVSRNLEEGKKIHKI-----AVWKGFELDFSVSTALIDMYMKC 355
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLL 523
EA+D Q +P K D W LL
Sbjct: 356 SCPDEAVDLFQRLP-KKDVVSWVALL 380
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 16/258 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR +L L+ +M + ++P+ FPF K+CA LSDL ++IH H+V
Sbjct: 786 WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV 845
Query: 82 --------------KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ KC ++ A +FD+MAVRD+ SW +M+ G+A G+ L
Sbjct: 846 CCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLG 905
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F MR G+ + V+++ + A + L + HS+ I G + D+ V + Y+
Sbjct: 906 FFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYS 965
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L +A +F E + +V W++M+A +++ + M+ G R T
Sbjct: 966 KCGSLDLARCLF--DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTF 1023
Query: 248 VSLLSSFVCPEALVQGRL 265
+LS+ L +G++
Sbjct: 1024 TCVLSACSHSGLLEEGKM 1041
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 134/279 (48%), Gaps = 19/279 (6%)
Query: 258 EALVQGRLV---HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
+A GR V HS G D L S+Y+KC + +AR +FD W
Sbjct: 12 QACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWN 71
Query: 315 AMISGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
+ + Y ++ +E LRLF M AGE PD T+ + C LELGK +A
Sbjct: 72 STLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKK 131
Query: 374 GG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
+ ++ V +AL+++YSKCG +G+A ++F V WT+M+ G N + EAL
Sbjct: 132 NDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALA 191
Query: 433 LFHQLMELD---LRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHY 487
LF Q++ +D L P VT ++V+ AC ++ G + +I+ + ++ +L
Sbjct: 192 LFSQMVMMDCVVLDP--VTLVSVVSACAQLLNVKAGSCVHGLVIRRE-----FDGDLPLV 244
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + +L + G K A + MP K D W T++ AC
Sbjct: 245 NSLLNLYAKTGCEKIAANLFSKMPEK-DVISWSTMI-AC 281
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 332/629 (52%), Gaps = 21/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W S I + LF++M++ ++P+ + F + +AC L + +H
Sbjct: 280 WTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK 339
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + S + KC ++ A ++FD + R+V SW AM+ GFAQ G ++
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M GI+ + VT M + A L + + I G +D V +S YA
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC LK A VF I ++ VV+WN+M+ +++D++L ++ ++ G + + +T
Sbjct: 460 KCGSLKDAHRVFEKISKQ--NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTF 517
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L+ ++L G+ VH + G + D+ V N L+SM+ CGD+ SA+ LF+ +
Sbjct: 518 TSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPK 577
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW +I+G+ Q G A F M+ +G PD +T +++ C AL G+
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRL 637
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+V+V LI MY+KCGSI DA ++F+ LP+K V SWT+MI G A +G
Sbjct: 638 HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRG 697
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD-KGISYNPELDH 486
EAL+LF+Q+ + ++P+ +TF+ L AC H G +E+G + + K + P ++H
Sbjct: 698 KEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG----LHHFQSMKEFNIEPRMEH 753
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y CM DL GR G L EA++F+ M ++ D+ +WG LL AC++HLN+E+ E A +L+
Sbjct: 754 YGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELD 813
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+ +V ++N YA G W VA +R +M V K PGQS ++GK TF ++D+ H
Sbjct: 814 PNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTH 873
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKWI 635
++E + L+ L + R+ Y +++
Sbjct: 874 PQTEEIHAELERLHMEMRQLGYVPDTRYV 902
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 235/465 (50%), Gaps = 16/465 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + WN + V + L QM Q+ ++P+ TF + ACA ++ +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++ I+K+ + +KC + A K+FD + RD+ +W +M+ G A+ G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ LF M G+Q D V + L +A H + L K VH+ +G D ++ V
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+S Y KC ++ A VF + + R VVSW +M+AG + D++ F+ M+ +G
Sbjct: 352 AILSMYTKCGSMEDALEVFDLV--KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ T +S+L + P AL +G+ + H I G+ D V L+SMY+KCG + A
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ I + V+W AMI+ Y Q D AL F A+ G P+ T S+++ C S +
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LELGKW GL+ ++ V NAL+ M+ CG + A+ LF +P++ +VSW T+IAG
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+G+ A D F + E ++P+++TF +L AC L +G
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 265/556 (47%), Gaps = 42/556 (7%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
LNR+ ++ N+ Q+ E V+ + + ++RQ T+ + + C K +
Sbjct: 82 LNRLSKAGQFNE-AMQVLERVDSSH----IQIYRQ-----------TYSALLQLCIKFKN 125
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + I+ HI KS + KC A +IFD+M +DV SWN +L G
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ Q G E +L M ++ D T + + A A+++ + +++ + G D D
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V I+ + KC D+ A VF + R +V+W SM+ G +F + N ++ M
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLP--TRDLVTWTSMITGLARHGRFKQACNLFQRM 303
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G + D VSLL + PEAL QG+ VH+ G+D ++ V ++SMY+KCG +
Sbjct: 304 EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSM 363
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ A +FD + R VSWTAMI+G+AQ G +DEA F M +G P+ VT +S++ C
Sbjct: 364 EDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL+ G+ ++ G + V AL+ MY+KCGS+ DA +F + ++ VV+W
Sbjct: 424 SSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWN 483
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYD 474
MI + ++ AL F L++ ++PN TF ++L C + LE G W +I
Sbjct: 484 AMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIM-- 541
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+L + + + G L A + MP K D W T++ H +
Sbjct: 542 --KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQ- 597
Query: 535 GEYVAYCLFKLEPHSA 550
VA+ FK+ S
Sbjct: 598 ---VAFDYFKMMQESG 610
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 219/452 (48%), Gaps = 21/452 (4%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ + + W + I + L F +M ++ IEPN +TF I AC+ S L
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 73 SQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
Q I HI++ S + KC L A+++F++++ ++V +WNAM+ + Q
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
+N L F + GI+ + T + + L L K VH + G+++D+ V
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHV 551
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N +S + C DL A+ +F + + R +VSWN+++AG K + ++++ M +
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMPK--RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + D T LL++ PEAL +GR +H+ FD DV V LISMY+KCG I+ A
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDA 669
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F + + SWT+MI+GYAQ G EAL LF+ M+ G PD +T + +S C +
Sbjct: 670 HQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHA 729
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWT 415
G +E G ++ + ++D++ + G + +A E + P+ V W
Sbjct: 730 GLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRV--WG 787
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
++ C ++ A + +ELD N V
Sbjct: 788 ALLGACQVHLNVELAEKAAQKKLELDPNDNGV 819
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 217/429 (50%), Gaps = 10/429 (2%)
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
++D NA+L ++ G +++ + IQ T L Q I K+L +
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+++ GV D+ + NT I+ YAKC + A+ +F + E + V SWN ++ G
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMRE--KDVYSWNLLLGGYVQH 189
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
++++ + M+ + + D T VS+L++ + +GR +++ + G+D D+ V
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
LI+M+ KCGDI A +FD + R V+WT+MI+G A+ G +A LF ME G
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
PD V +S++ C ALE GK G + V A++ MY+KCGS+ DA E+
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + + VVSWT MIAG A +G EA F++++E + PNRVTF+++L AC+ L
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429
Query: 463 EKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
++G I II+ Y + + + + + G LK+A + + K + W
Sbjct: 430 KRGQQIQDHIIE-----AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWN 483
Query: 521 TLLCACKIH 529
++ A H
Sbjct: 484 AMITAYVQH 492
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 178/335 (53%), Gaps = 11/335 (3%)
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVV--------SWNSMVAGCTYGDKFDDSLN 230
C++ + ++ + L+M F G + R VV N+++ + +F++++
Sbjct: 37 CSSCVPTHEGIETLRMLTTSFSGRCPKGRCVVFADIKDTQKANAVLNRLSKAGQFNEAMQ 96
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ + ++ T +LL + + L G +++H G D+ + NTLI+MY+
Sbjct: 97 VLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYA 156
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
KCG+ SA+ +FD + ++ SW ++ GY Q G +EA +L M PD T +S
Sbjct: 157 KCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVS 216
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
M++ C + ++ G+ N G ++ V ALI+M+ KCG IGDA ++F LP +
Sbjct: 217 MLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
+V+WT+MI G A +G F +A +LF ++ E ++P++V F+++L+AC H LE+G
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG---KK 333
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+ K + ++ E+ + + + + G +++AL+
Sbjct: 334 VHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/594 (33%), Positives = 328/594 (55%), Gaps = 20/594 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS---------------PFV 86
FR++ + P+N T PF+ +AC L +L ++IH HIV +V
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH-HIVYKFGLDLDHFVCAALVDMYV 76
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC ++ A +FD+M RD+ +W M+ G+A+ G L LF MR G+ D V ++
Sbjct: 77 KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 136
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ A + + + + DV + I YAKC ++ A +F +EE+
Sbjct: 137 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK- 195
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
V+SW++M+A Y + +L+ +R M+ +G D T+ SLL + + L GRL+
Sbjct: 196 -NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLI 254
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H +G DLD V L+ MY KC +I+ AR LFD + +R V+WT MI GYA+ G+
Sbjct: 255 HHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNA 314
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+E+L LF M G +PD V +++++ C + GA+ + D+Y + +V++ A+
Sbjct: 315 NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAM 374
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDM++KCG + ARE+F + EK V+SW+ MIA +G+ +ALDLF ++ + PN+
Sbjct: 375 IDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNK 434
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+T +++L AC+H G +E+G + ++D S ++ HY+C+ DLLGR G+L EAL
Sbjct: 435 ITLVSLLYACSHAGLVEEGLRFFSLMWED--YSVRADVKHYTCVVDLLGRAGRLDEALKL 492
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
++SM ++ D G+WG L AC+ H ++ + E A L +L+P + Y+ ++N YA GRW
Sbjct: 493 IESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRW 552
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
+ VA R +M + ++KK PG + ++ K+ F+ D H S+ Y +L L
Sbjct: 553 EDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLG 606
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 214/422 (50%), Gaps = 14/422 (3%)
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ GFA++G N F + G + D T+ + +A K+L + + +H G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+D D VC + Y KC +++ A +F ++E R +V+W M+ G K ++SL
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQE--RDLVTWTVMIGGYAECGKANESLVL 118
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M G D +V+++ F C + A+ + R++ + F LDV + +I MY
Sbjct: 119 FEKMREEGVVPDKVAMVTVV--FACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMY 176
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+KCG ++SAR +FD + ++ +SW+AMI+ Y G +AL LF M ++G LPD +T+
Sbjct: 177 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLA 236
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S++ C L++G+ + GL + VC AL+DMY KC I DAR LF +PE+
Sbjct: 237 SLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER 296
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
+V+WT MI G A G E+L LF ++ E + P++V + V+ AC G + K I
Sbjct: 297 DLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI- 355
Query: 470 IIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
DD +LD + M D+ + G ++ A + M K+ W ++ A
Sbjct: 356 ----DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYG 410
Query: 528 IH 529
H
Sbjct: 411 YH 412
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 213/441 (48%), Gaps = 30/441 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I +A+++L+LF +M++ + P+ + + ACAKL + +++I +I
Sbjct: 99 WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 158
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC ++ A +IFD M ++V SW+AM+ + G L
Sbjct: 159 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 218
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G+ D +T+ L A K+L + + +H G+D D VC + Y
Sbjct: 219 LFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYG 278
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +++ A +F + E R +V+W M+ G ++SL + M G D +
Sbjct: 279 KCREIEDARFLFDKMPE--RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAM 336
Query: 248 VSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
V+++ F C + A+ + R + + F LDV + +I M++KCG ++SAR +FD +
Sbjct: 337 VTVV--FACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM 394
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ +SW+AMI+ Y G +AL LF M +G LP+ +T++S++ C +G +E G
Sbjct: 395 EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 454
Query: 366 WF-----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
F ++Y+ +K V +D+ + G + +A +L ++ EK W +
Sbjct: 455 RFFSLMWEDYSVRADVKHYTCV----VDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLG 510
Query: 420 GCALNGEFVEALDLFHQLMEL 440
C + + V A L+EL
Sbjct: 511 ACRTHKDVVLAEKAATSLLEL 531
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 342/625 (54%), Gaps = 22/625 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH- 79
+N IR + ++ L+ + K+ ++ P+N T+ F A ++L D ++H H
Sbjct: 80 FNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHS 139
Query: 80 ----IVKSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ + FV K R + A K+FD M RD WN M+ GF++ + E+ +
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
R+F +M VG+ D T+ + A + L + G+ +DV V IS Y
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLY 259
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC ++F I++ ++S+N+M++G T+ + + ++ +R ++ +G R++ +T
Sbjct: 260 SKCGKSCKGRILFDQIDQP--DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+V L+ ++ L RL+ + + G L SV L ++Y + ++ AR LFD
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGK 365
+++ SW AMISGY Q G D A+ LF E +L P+ VTV S++S C Q GAL +GK
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLF--QEMMPQLSPNPVTVTSILSACAQLGALSIGK 435
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
W S L+ NV V AL+DMY+KCGSI +AR+LF + +K VV+W MI G L+G
Sbjct: 436 WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHG 495
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL LF+++++ + P VTFL++L AC+H+G + +G I ++ G + P +
Sbjct: 496 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG--FQPMSE 553
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM D+LGR G+L AL+F++ MP++ +WG LL AC IH N E+ + LF+L
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQL 613
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + YV ++N Y+ + A++R ++K+ ++ K PG +L I+ + FT+ DR
Sbjct: 614 DPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRS 673
Query: 606 HAESELTYPVLDCLALHSREEAYSS 630
H ++ + +L+ L RE Y +
Sbjct: 674 HPQATAIFEMLEKLTGKMREAGYQA 698
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+Q +L+ HGIHY D+S I L + G + R LF+ + + +I G+
Sbjct: 33 IQAQLI-LHGIHY----DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGF 87
Query: 321 AQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+ G ++ L+ + L PD T IS + +G ++ G+ N
Sbjct: 88 SDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASN 147
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V +A++D+Y K AR++F +PE+ V W TMI+G + N F +++ +F +++
Sbjct: 148 LFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLD 207
Query: 440 LDLRPNRVTFLAVLQA 455
+ L + T VL A
Sbjct: 208 VGLSFDSTTLATVLTA 223
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 326/621 (52%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + + + LFR M+ + EPN T CA +DL+ +H V
Sbjct: 210 WNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAV 269
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + KC LD A+++F+ M D+ +WN M+ G Q G
Sbjct: 270 KCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFG 329
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LFY+M+ G + D +T++ L A L K VH + + V+ DV + + + Y
Sbjct: 330 LFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYF 389
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++MA+ ++ R VV ++M++G +++L +R+++ + + T+
Sbjct: 390 KCRDVRMAQNLYDA--ARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTI 447
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L AL G+ +H + + ++ V + L+ MY+KCG +D + +F +
Sbjct: 448 ASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQ 507
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V+W +MIS ++Q G EAL LF M G + +T+ + +S C A+ GK
Sbjct: 508 KDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEI 567
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G +K ++ +ALIDMY+KCG++ A +F +P+K VSW ++I+ +G
Sbjct: 568 HGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLV 627
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E++ L H + E +P+ VTFLA++ AC H G +E+G + + Q K P ++H+
Sbjct: 628 KESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEG--VQLFQCMTKKYLIAPRMEHF 685
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DL R GKL +A+ F+ MP K DAGIWG LL AC++H N+E+ + + LFKL+P
Sbjct: 686 ACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDP 745
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV M+N A+ GRWDGV+ +R +MK N++ K PG S +N + F A D+ H
Sbjct: 746 ANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHP 805
Query: 608 ESELTYPVLDCLALHSREEAY 628
ESE Y L L REE Y
Sbjct: 806 ESEDIYTSLKTLLQELREEGY 826
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/537 (29%), Positives = 262/537 (48%), Gaps = 25/537 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDI--EPNNLTFPFIAKACAKL 67
L R +S++ WN IR + H +L + +M + P+ T P++ K+CA L
Sbjct: 96 LPRAAAASSL-PWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154
Query: 68 SDLIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
+ +++H G + + L A FD + RD WN M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGV 172
G + G ++ +RLF NMR G + +F T+ L+ A A LS + +HS + G+
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQ-LHSLAVKCGL 273
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
+ +V+V NT ++ YAKC L A +F + + +V+WN M++GC F ++ +
Sbjct: 274 EPEVAVANTLLAMYAKCQCLDDAWRLFELMPQ--DDLVTWNGMISGCVQNGLFVEAFGLF 331
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M +G R D T+VSLL + L QG+ VH + + ++DV +++ L+ +Y KC
Sbjct: 332 YDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKC 391
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
D+ A+ L+D V + MISGY G +EAL++F + P+ VT+ S++
Sbjct: 392 RDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVL 451
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
GC AL LG+ Y + V +AL+DMY+KCG + + +F + +K V
Sbjct: 452 PGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEV 511
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
+W +MI+ + NG+ EALDLF Q+ ++ N +T A L AC + G I +
Sbjct: 512 TWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVT 571
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
KG ++ S + D+ + G L+ AL + MP K++ W +++ A H
Sbjct: 572 I--KG-PIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVS-WNSIISAYGAH 624
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 187/391 (47%), Gaps = 11/391 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVAS---WNAMLVGFAQMGFLENVLRLFYNMRL----VGI 137
+V R A +F + AS WN ++ GF G ++ L + + +++
Sbjct: 80 YVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAG--QHHLAVLFYVKMWSHPAAP 137
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
D T+ + ++ +SL + VH IG+ DV V + + YA L A
Sbjct: 138 SPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARD 197
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F GI ER V WN M+ GC D ++ +R+M +G + T+ LS
Sbjct: 198 AFDGIPER--DCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATD 255
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
L+ G +HS + G + +V+V NTL++MY+KC +D A LF+ + V+W MI
Sbjct: 256 ADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMI 315
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SG Q G EA LF+ M+ +G PD +T++S++ L+ GK Y +
Sbjct: 316 SGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVN 375
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V + +AL+D+Y KC + A+ L+ A VV +TMI+G LNG EAL +F L
Sbjct: 376 MDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYL 435
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+E ++PN VT +VL C L G I
Sbjct: 436 LEQCIKPNAVTIASVLPGCASMAALPLGQQI 466
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 203/633 (32%), Positives = 330/633 (52%), Gaps = 19/633 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+++ + S ++ W I + + +F++M+Q + PN +T+ + A + +
Sbjct: 184 FDKMEKKSVVS-WTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAA 242
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + + +H I+ + + KC ++F+++ RD+ +WN M+ G
Sbjct: 243 LKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 302
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
A+ G+ E ++ M+ G+ + +T + L A +++ L K +HS G +D
Sbjct: 303 LAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSD 362
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V N IS Y++C +K A LVF + + V+SW +M+ G ++L Y+ M
Sbjct: 363 IGVQNALISMYSRCGSIKDARLVFDKMVRK--DVISWTAMIGGLAKSGFGAEALTVYQEM 420
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G + T S+L++ P AL GR +H + G D V NTL++MYS CG +
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSV 480
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
AR +FD + R V++ AMI GYA EAL+LF ++ G PD VT ++M++ C
Sbjct: 481 KDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 540
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
SG+LE + GG + V NAL+ Y+KCGS DA +F + ++ V+SW
Sbjct: 541 ANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWN 600
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+I G A +G +AL LF ++ ++P+ VTF+++L AC+H G LE+G D
Sbjct: 601 AIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQD 660
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
I P ++HY CM DLLGR G+L EA +++MP +++ IWG LL AC+IH N+ +
Sbjct: 661 FAII--PTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVA 718
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E A KL+ +A YV +++ YA G WD A +R +M++ V K PG+S + K
Sbjct: 719 ERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDK 778
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F AEDR H +SE Y LD L + + Y
Sbjct: 779 LHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGY 811
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 245/480 (51%), Gaps = 22/480 (4%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
Y T++ WN+ + + K L L RQM+Q+ + P+ T +C L +
Sbjct: 86 YMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWG 145
Query: 74 QMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH +++ + KC ++ A ++FD+M + V SW + G+A
Sbjct: 146 REIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADC 205
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G E +F M G+ + +T + + A L K+VHS ++ G ++D +V
Sbjct: 206 GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG 265
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ YAKC K VF E+L R +++WN+M+ G G ++++ Y M
Sbjct: 266 TALVKMYAKCGSYKDCRQVF----EKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQR 321
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G + T V LL++ V AL G+ +HS GF D+ V N LISMYS+CG I
Sbjct: 322 EGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKD 381
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
AR++FD + + +SWTAMI G A+ G EAL ++ M+ AG P+ VT S+++ C
Sbjct: 382 ARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSS 441
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE G+ GL + V N L++MYS CGS+ DAR++F + ++ +V++ M
Sbjct: 442 PAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAM 501
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I G A + EAL LF +L E L+P++VT++ +L AC ++G LE WA I KG
Sbjct: 502 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLE--WAREIHTLVRKG 559
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 279/554 (50%), Gaps = 29/554 (5%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDR 90
++Q + N+ + + K C ++ DL+ + +H HI++ + +++C
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 91 LDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
++ A +++ +++ R V SWNAM+VG+ Q G++E L+L M+ G+ D T+M
Sbjct: 74 IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
+ L + +H + G+ DV V N ++ YAKC ++ A VF +E+ ++
Sbjct: 134 SSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEK--KS 191
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
VVSW + G + + + ++ M G + T +S+L++F P AL G+ VHS
Sbjct: 192 VVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHS 251
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
++ G + D +V L+ MY+KCG R +F+ + +R ++W MI G A+ G +E
Sbjct: 252 RILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEE 311
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
A ++ M+ G +P+ +T + +++ C S AL GK + G ++ V NALI
Sbjct: 312 ASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALIS 371
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MYS+CGSI DAR +F + K V+SWT MI G A +G EAL ++ ++ + + PNRVT
Sbjct: 372 MYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVT 431
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
+ ++L AC+ LE G I Q + G++ + + + + ++ G +K+A
Sbjct: 432 YTSILNACSSPAALEWGRRIH-QQVVEAGLATDAHVG--NTLVNMYSMCGSVKDARQVFD 488
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP----YVEMANKYALGG 564
M I+ D + ++ H +G+ +L+ P Y+ M N A G
Sbjct: 489 RM-IQRDIVAYNAMIGGYAAH---NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 544
Query: 565 RWDGVANIRTMMKR 578
+ I T++++
Sbjct: 545 SLEWAREIHTLVRK 558
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 142/245 (57%), Gaps = 2/245 (0%)
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D +++ +++ G +++ + + +L + + LV GR VH H I + D +N L
Sbjct: 5 DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64
Query: 286 ISMYSKCGDIDSARVLFDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
I+MY +CG I+ AR ++ + +RT SW AM+ GY Q G +++AL+L M+ G P
Sbjct: 65 INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T++S +S C GALE G+ A GL +V V N +++MY+KCGSI +ARE+F
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ +K VVSWT I G A G A ++F ++ + + PNR+T+++VL A + L+
Sbjct: 185 DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALK 244
Query: 464 KGWAI 468
G A+
Sbjct: 245 WGKAV 249
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 341/625 (54%), Gaps = 22/625 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH- 79
+N IR + ++ L+ + K ++ P+N T+ F A ++L D ++H H
Sbjct: 80 FNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHS 139
Query: 80 ----IVKSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ + FV K R + A K+FD M RD WN M+ GF++ + E+ +
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
R+F +M VG+ D T+ + A + L + G+ +DV V IS Y
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLY 259
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC ++F I++ ++S+N+M++G T+ + + ++ +R ++ +G R++ +T
Sbjct: 260 SKCGKSCKGRILFDQIDQP--DLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+V L+ ++ L RL+ + + G L SV L ++Y + ++ AR LFD
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGK 365
+++ SW AMISGY Q G D A+ LF E +L P+ VTV S++S C Q GAL +GK
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLF--QEMMPQLSPNPVTVTSILSACAQLGALSIGK 435
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
W S L+ NV V AL+DMY+KCGSI +AR+LF + +K VV+W MI G L+G
Sbjct: 436 WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHG 495
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL LF+++++ + P VTFL++L AC+H+G + +G I ++ G + P +
Sbjct: 496 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG--FQPMSE 553
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM D+LGR G+L AL+F++ MP++ +WG LL AC IH N E+ + LF+L
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQL 613
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + YV ++N Y+ + A++R ++K+ ++ K PG +L I+ + FT+ DR
Sbjct: 614 DPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRS 673
Query: 606 HAESELTYPVLDCLALHSREEAYSS 630
H ++ + +L+ L RE Y +
Sbjct: 674 HPQATAIFEMLEKLTGKMREAGYQA 698
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+Q +L+ HGIHY D+S I L + G + R LF+ + + +I G+
Sbjct: 33 IQAQLI-LHGIHY----DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGF 87
Query: 321 AQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+ G ++ L+ + L PD T IS + +G ++ G+ N
Sbjct: 88 SDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASN 147
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V +A++D+Y K AR++F +PE+ V W TMI+G + N F +++ +F +++
Sbjct: 148 LFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLD 207
Query: 440 LDLRPNRVTFLAVLQA 455
+ L + T VL A
Sbjct: 208 VGLSFDSTTLATVLTA 223
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 339/629 (53%), Gaps = 21/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + E + ++ LF++M + +E ++ TF ++K+ + L + + +HG+I+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYIL 222
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F +K R+D A K+FDEM RDV SWN+++ G+ G E L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M GI+ D T++ + ++ +SL ++VH FG+ + CNT + Y+
Sbjct: 283 VFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYS 342
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A++VF E R+VVS+ SM+AG +++ + M G DV TV
Sbjct: 343 KCGDLDSAKVVF--REMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++L+ L +G+ VH D+ V N L+ MY+KCG + A ++F +
Sbjct: 401 TAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRV 460
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKW 366
+ +SW +I GY++ +EAL LF + PD TV ++ C A + G+
Sbjct: 461 KDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y G + V N+L+DMY+KCG++ AR LF + K +VSWT MIAG ++G
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGF 580
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELD 485
EA+ LF+Q+ + + P+ ++F+++L AC+H+G +++GW +I++++ K P ++
Sbjct: 581 GKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECK---IEPTVE 637
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ D+L R G L +A F+++MPI DA IWG LLC C+IH ++++ E VA +F+L
Sbjct: 638 HYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFEL 697
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP + YV MAN YA +W+ V +R + + ++K PG S I G+ F A D
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 757
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
+ E+E L + EE YS K+
Sbjct: 758 NPETEKIEAFLRGVRARMIEEGYSPLTKY 786
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 249/500 (49%), Gaps = 26/500 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ N+Q+R + L + DI+P T + + CA L + +
Sbjct: 60 SVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVD 117
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I + FV C L A ++FD++ + WN ++ A+ G
Sbjct: 118 NFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFS 177
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M G++ D T ++++ + ++ + +H + + G SV N+ +
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLV 237
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y K + A VF + ER V+SWNS++ G + L+ + M+++G +D
Sbjct: 238 AFYLKNHRVDSARKVFDEMTER--DVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEID 295
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ T+VS+ + + GR VH G+ F + NTL+ MYSKCGD+DSA+V+F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFR 355
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R+ VS+T+MI+GYA++G EA++LF ME G PD+ TV ++++ C ++ L+
Sbjct: 356 EMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDE 415
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK + + ++ V NAL+DMY+KCGS+ +A +F + K ++SW T+I G +
Sbjct: 416 GKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSK 475
Query: 424 NGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQ---YDDKG 477
N EAL LF+ L+ E P+ T VL AC +KG I I++ + D+
Sbjct: 476 NCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535
Query: 478 ISYNPELDHYS-CMADLLGR 496
++ N +D Y+ C A LL R
Sbjct: 536 VA-NSLVDMYAKCGALLLAR 554
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 315/594 (53%), Gaps = 19/594 (3%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMA 102
F + + CA+L L + +H I+KS + KC L A ++FD +
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
R++ SW AM+ F + + M+L G + D VT + L A + + L L +
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH + G++ + V + + YAKC D+ A ++F + E+ VV+W ++AG
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEK--NVVTWTLLIAGYAQQ 227
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ D +L M + T S+L P AL G+ VH + I G+ ++ V+
Sbjct: 228 GQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVV 287
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N+LI+MY KCG ++ AR LF + R V+WTAM++GYAQ G DEA+ LF M+ G
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
PD +T S+++ C L+ GK G +V + +AL+ MY+KCGS+ DA +
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLV 407
Query: 403 FYALPEKIVVSWTTMIAGC-ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
F + E+ VV+WT +I GC A +G EAL+ F Q+ + ++P++VTF +VL ACTH G
Sbjct: 408 FNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGL 467
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
+E+G Y D GI P ++HYSC DLLGR G L+EA + + SMP +WG
Sbjct: 468 VEEGRKHFRSMYLDYGI--KPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525
Query: 522 LLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV 581
LL AC++H ++E GE A + KL+P YV +++ YA GR++ +R +M++ V
Sbjct: 526 LLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDV 585
Query: 582 KKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
K PGQS ++GK F ED+ H ESE Y L L +E Y +++
Sbjct: 586 VKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFV 639
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 226/441 (51%), Gaps = 34/441 (7%)
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
+ G L+ L + M L G + GL Q + L + VH+ + G+ +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ NT +S YAKC L A VF I R R +VSW +M+ G+K ++ Y M
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSI--RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G + D T VSLL++F PE L G+ VH + G +L+ V +L+ MY+KCGDI
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISK 201
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
ARV+FD + ++ V+WT +I+GYAQ+G +D AL L M+ A P+ +T S++ GC
Sbjct: 202 ARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTT 261
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE GK Y G + V N+LI MY KCG + +AR+LF LP + VV+WT M
Sbjct: 262 PAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAM 321
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS-------- 469
+ G A G EA++LF ++ + ++P+++TF +VL +C+ FL++G I
Sbjct: 322 VTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGY 381
Query: 470 ----------IIQY------DDKGISYN--PELDHYSCMADLLG---RKGKLKEALDFVQ 508
+ Y DD + +N E + + A + G + G+ +EAL++
Sbjct: 382 NLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFD 441
Query: 509 SMP---IKSDAGIWGTLLCAC 526
M IK D + ++L AC
Sbjct: 442 QMKKQGIKPDKVTFTSVLSAC 462
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 19/444 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R I W + I V N+ + + MK +P+ +TF + A L Q
Sbjct: 109 RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H IV++ + KC + A IFD + ++V +W ++ G+AQ G
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
++ L L M+ + + +T + Q L K VH + I G ++ V N
Sbjct: 229 QVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVN 288
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I+ Y KC L+ A +F + R VV+W +MV G D+++N +R M G
Sbjct: 289 SLITMYCKCGGLEEARKLFSDLPH--RDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGI 346
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D T S+L+S P L +G+ +H +H G++LDV + + L+SMY+KCG +D A +
Sbjct: 347 KPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASL 406
Query: 301 LFDGICDRTRVSWTAMISG-YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F+ + +R V+WTA+I+G AQ G EAL F M+ G PD VT S++S C G
Sbjct: 407 VFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVG 466
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTM 417
+E G K F + G+K V + +D+ + G + +A + ++P S W +
Sbjct: 467 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGAL 526
Query: 418 IAGCALNGEFVEALDLFHQLMELD 441
++ C ++ + +++LD
Sbjct: 527 LSACRVHSDVERGERAAENVLKLD 550
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 335/641 (52%), Gaps = 22/641 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + R I W S I + + LF+ M++ ++P+ + F + KAC
Sbjct: 263 FNNLPRRDLIT-WTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEA 321
Query: 70 LIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +H G + S + KC ++ A ++F+ + R+V SW AM+ G
Sbjct: 322 LEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
FAQ G +E F M GI+ + VT M + A L + +H I G D
Sbjct: 382 FAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD 441
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V +S YAKC L A VF I ++ VV+WN+M+ +K+D+++ ++ +
Sbjct: 442 DRVRTALLSMYAKCGSLMDARNVFERISKQ--NVVAWNAMITAYVQHEKYDNAVATFQAL 499
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G + D +T S+L+ P+AL G+ V S I GF+ D+ + N L+SM+ CGD+
Sbjct: 500 LKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDL 559
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
SA LF+ + +R VSW +I+G+ Q G+ A F M+ +G PD +T +++ C
Sbjct: 560 MSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNAC 619
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL G+ L +V+V LI MY+KCGSI DA +F+ LP+K V SWT
Sbjct: 620 ASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWT 679
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+MI G A +G EAL+LF Q+ + ++P+ +TF+ L AC H G +++G + ++
Sbjct: 680 SMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG----LHHFES 735
Query: 476 -KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
K + P ++HY CM DL GR G L EA++F+ M +K D+ +WG LL AC++HL++E+
Sbjct: 736 MKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVEL 795
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
E VA +L+P+ YV ++N YA G W V +R +M V K PGQS ++G
Sbjct: 796 AEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDG 855
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
+ F ++D+ H + E + L L + ++ Y +++
Sbjct: 856 RVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYV 896
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 236/461 (51%), Gaps = 16/461 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL-----IYS 73
+ WN + V + L QM Q+ ++P+ TF ++ ACA ++ ++S
Sbjct: 170 VYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFS 229
Query: 74 QMIH---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+++ G + + +KC +D A K+F+ + RD+ +W +M+ G A+ +
Sbjct: 230 LILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQ 289
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
LF M G+Q D V + L +A H + L K VH+ +G+D ++ V +S
Sbjct: 290 ACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS 349
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC ++ A VF + + R VVSW +M+AG + +++ F+ M+ +G +
Sbjct: 350 MYTKCGSMEDALEVFNLV--KGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNR 407
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T +S+L + P AL QGR +H I G+ D V L+SMY+KCG + AR +F+
Sbjct: 408 VTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFER 467
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I + V+W AMI+ Y Q D A+ F A+ G PD T S+++ C ALELG
Sbjct: 468 ISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG 527
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
KW + G + ++ + NAL+ M+ CG + A LF +PE+ +VSW T+IAG +
Sbjct: 528 KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQH 587
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
GE A D F + E ++P+++TF +L AC L +G
Sbjct: 588 GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/532 (29%), Positives = 258/532 (48%), Gaps = 25/532 (4%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I + N + +++ +A +EA +L+ + I+ + T+ + + C K +L
Sbjct: 66 IKNTQRANAFLNRLSKAGQLSEA---MLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGD 122
Query: 73 SQMIHGHI--------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ IH HI + S + KC + A +IFDEM +DV SWN +L G+ Q
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
E RL M G++ D T + + A AK++ + S ++ G D D+ V
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
I+ + KC + A VF + R +++W SM+ G +F + N ++ M
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRR--DLITWTSMITGLARHRQFKQACNLFQVMEEE 300
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + D VSLL + PEAL QG+ VH+ G D ++ V L+SMY+KCG ++ A
Sbjct: 301 GVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDA 360
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F+ + R VSWTAMI+G+AQ G ++EA F M +G P+ VT +S++ C +
Sbjct: 361 LEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRP 420
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
AL+ G+ + G + V AL+ MY+KCGS+ DAR +F + ++ VV+W MI
Sbjct: 421 SALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMI 480
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKG 477
+ ++ A+ F L++ ++P+ TF ++L C LE G W S+I
Sbjct: 481 TAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIR---- 536
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ +L + + + G L A++ MP + D W T++ H
Sbjct: 537 AGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQH 587
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 322/593 (54%), Gaps = 20/593 (3%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----VKCDRLDCAYK 96
++ M+ D E +N P + KAC + + Q +HG +VK+ F C+ L Y
Sbjct: 111 IYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYS 170
Query: 97 ----------IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
+FD++ +DV SW+ M+ + + G L+ L L +M ++ ++ + ++
Sbjct: 171 EVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMIS 230
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGV--DADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+T L L K++H++ + G + V +C I Y KC++L A VF G+ +
Sbjct: 231 ITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSK 290
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+++SW +M+A + + ++ + + M+ G + T++SL+ AL G+
Sbjct: 291 A--SIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGK 348
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
L+H+ + GF L + + I MY KCGD+ SAR +FD + + W+AMIS YAQ
Sbjct: 349 LLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNN 408
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+DEA +F M G P+ T++S++ C ++G+LE+GKW +Y G+K ++++
Sbjct: 409 CIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKT 468
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+ +DMY+ CG I A LF ++ + W MI+G A++G AL+LF ++ L + P
Sbjct: 469 SFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTP 528
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
N +TF+ L AC+H+G L++G + + G + P+++HY CM DLLGR G L EA
Sbjct: 529 NDITFIGALHACSHSGLLQEGKRLFHKMVHEFG--FTPKVEHYGCMVDLLGRAGLLDEAH 586
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ ++SMP++ + ++G+ L ACK+H NI++GE+ A LEPH + V M+N YA
Sbjct: 587 ELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASAN 646
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
RW VA IR MK + K PG S +NG F DR H +++ Y ++D
Sbjct: 647 RWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMID 699
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 238/512 (46%), Gaps = 41/512 (8%)
Query: 31 NKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDR 90
N N+ H L F Q + +PN P I + +L +Q +HGH +K+
Sbjct: 25 NTNQYHSPTLKFTQSQP---KPN---VPHIQQELH--INLNETQQLHGHFIKTSS----- 71
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN-----VLRLFYNMRLVGIQADFVTVM 145
+C+Y++ +A + S NA + F +++N +++ MR + D +
Sbjct: 72 -NCSYRV--PLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIP 128
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ +A L + VH F + G DV VCN I Y++ L +A L+F IE
Sbjct: 129 SVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIEN- 187
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ VVSW++M+ D++L+ R M + ++S+ L G+
Sbjct: 188 -KDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKA 246
Query: 266 VHSHGIHYGF--DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+H++ + G V + LI MY KC ++ AR +FDG+ + +SWTAMI+ Y
Sbjct: 247 MHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHC 306
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+L+E +RLF M G P+ +T+LS++ CG +GALELGK + G ++++
Sbjct: 307 NNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLA 366
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
A IDMY KCG + AR +F + K ++ W+ MI+ A N EA D+F + +R
Sbjct: 367 TAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIR 426
Query: 444 PNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPEL-----DHYSCMADLLGRK 497
PN T +++L C G LE G W S I D +GI + L D Y+ D+
Sbjct: 427 PNERTMVSLLMICAKAGSLEMGKWIHSYI--DKQGIKGDMILKTSFVDMYANCGDIDTAH 484
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
EA D D +W ++ +H
Sbjct: 485 RLFAEATD--------RDISMWNAMISGFAMH 508
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 204/424 (48%), Gaps = 24/424 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W++ IR + L L R M ++P+ + I A+L+DL + +H ++
Sbjct: 192 SWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYV 251
Query: 81 VKSP----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+++ +VKC+ L A ++FD ++ + SW AM+ + L
Sbjct: 252 MRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNE 311
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+RLF M G+ + +T++ L + A L L K +H+F + G + + +I
Sbjct: 312 GVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFID 371
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC D++ A VF + + ++ W++M++ + D++ + + HM G R +
Sbjct: 372 MYGKCGDVRSARSVFDSFKS--KDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNE 429
Query: 245 TTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T+VSLL +C +A L G+ +HS+ G D+ + + + MY+ CGDID+A LF
Sbjct: 430 RTMVSLL--MICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLF 487
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DR W AMISG+A G + AL LF MEA G P+ +T + + C SG L+
Sbjct: 488 AEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQ 547
Query: 363 LGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAG 420
GK F G V ++D+ + G + +A EL ++P + ++ + + +A
Sbjct: 548 EGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAA 607
Query: 421 CALN 424
C L+
Sbjct: 608 CKLH 611
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 133/311 (42%), Gaps = 17/311 (5%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
++I W + I ++ N ++ + LF +M + PN +T + K C L +++
Sbjct: 291 ASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLL 350
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H +++ F KC + A +FD +D+ W+AM+ +AQ +
Sbjct: 351 HAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCI 410
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ +F +M GI+ + T++ L A L + K +HS+ G+ D+ + ++
Sbjct: 411 DEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSF 470
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YA C D+ A +F E R + WN+M++G + +L + M G
Sbjct: 471 VDMYANCGDIDTAHRLFA--EATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTP 528
Query: 243 DVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T + L + L +G RL H +GF V ++ + + G +D A L
Sbjct: 529 NDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHEL 588
Query: 302 FDGICDRTRVS 312
+ R ++
Sbjct: 589 IKSMPMRPNIA 599
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
++S + W++ I N + +F M I PN T + CAK L
Sbjct: 389 FKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG 448
Query: 74 QMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH + I+K+ FV C +D A+++F E RD++ WNAM+ GFA
Sbjct: 449 KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMH 508
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS-----LLKSVHSFG 167
G E L LF M +G+ + +T +G A H+ L K VH FG
Sbjct: 509 GHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFG 561
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/629 (32%), Positives = 336/629 (53%), Gaps = 23/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + E +++ LF +M++ I ++ TF + K A + + + +HG+++
Sbjct: 126 WNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVL 185
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + KC ++ A +FDE++ RDV SWN+M+ G GF N L
Sbjct: 186 KLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLE 245
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M +G+ D T++ + A + +L+L +++H++G+ G V NT + Y+
Sbjct: 246 FFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYS 305
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +L A VF + E T+VSW S++A +++ + M G R D+ V
Sbjct: 306 KCGNLNGANEVFVKMGET--TIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAV 363
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S++ + C +L +GR VH+H ++ V N L++MY+KCG ++ A ++F +
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV 423
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW MI GY+Q +EAL+LF M+ + PD VT+ ++ C ALE G+
Sbjct: 424 KNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLK-PDDVTMACVLPACAGLAALEKGREI 482
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G ++ V AL+DMY KCG + A++LF +P+K ++ WT MIAG ++G
Sbjct: 483 HGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFG 542
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELD 485
EA+ F ++ + P +F ++L ACTH+G L++GW + +D N P+L+
Sbjct: 543 KEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKL----FDSMKSECNIEPKLE 598
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLL R G L A F+++MPIK DA IWG LL C+IH ++E+ E VA +F+L
Sbjct: 599 HYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFEL 658
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP + YV +AN YA +W+ V I+ + + +K G S + GK F A D
Sbjct: 659 EPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTS 718
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
H ++++ +L L + YS+ +K+
Sbjct: 719 HPQAKMIDSLLRKLTMKMNRGGYSNKIKY 747
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 272/524 (51%), Gaps = 29/524 (5%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N++I + + + L + +++++E N T+ + + CA+L L + +H I
Sbjct: 28 NAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHSIISS 85
Query: 83 SP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ +V C L +IFD + + WN ++ +A++G + L
Sbjct: 86 NGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGL 145
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M+ +GI+ D T + + + + K VH + + +G + +V N+ I++Y K
Sbjct: 146 FEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFK 205
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C +++ A ++F + +R VVSWNSM++GCT + L F+ M+ G +D T+V
Sbjct: 206 CGEVESARILFDELSDR--DVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLV 263
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
++L + L GR +H++G+ GF V NTL+ MYSKCG+++ A +F + +
Sbjct: 264 NVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGET 323
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
T VSWT++I+ + ++G EA+ LF M++ G PD+ V S++ C S +L+ G+
Sbjct: 324 TIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVH 383
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
N+ + N+ V NAL++MY+KCGS+ +A +F LP K +VSW TMI G + N
Sbjct: 384 NHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPN 443
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDH 486
EAL LF M+ L+P+ VT VL AC LEKG I I++ KG Y +L H
Sbjct: 444 EALQLFLD-MQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILR---KG--YFSDL-H 496
Query: 487 YSC-MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+C + D+ + G L A +P K D +W ++ +H
Sbjct: 497 VACALVDMYVKCGLLVLAQQLFDMIP-KKDMILWTVMIAGYGMH 539
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 140/319 (43%), Gaps = 19/319 (5%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+TI W S I V + ++ + LF +M+ + P+ + ACA + L + +
Sbjct: 323 TTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREV 382
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H HI K+ + KC ++ A IF ++ V+++ SWN M+ G++Q
Sbjct: 383 HNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLP 442
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L+LF +M+ ++ D VT+ + A L + +H + G +D+ V
Sbjct: 443 NEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACAL 501
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y KC L +A+ +F I + + ++ W M+AG ++++ + M G
Sbjct: 502 VDMYVKCGLLVLAQQLFDMIPK--KDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEP 559
Query: 243 DVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ ++ S+L + L +G +L S + + ++ + + G++ A
Sbjct: 560 EESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKF 619
Query: 302 FDGICDRTRVS-WTAMISG 319
+ + + + W A++SG
Sbjct: 620 IETMPIKPDAAIWGALLSG 638
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 327/639 (51%), Gaps = 22/639 (3%)
Query: 8 PRLNRIY---RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
PR +++ + +N+ + K + L LF QM I P+ +T+ + A
Sbjct: 180 PRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
S L + IH V+ V+C +D A + F +A RDV +N
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYN 299
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
A++ AQ G +Y MR G+ + T + + A +K L K +HS
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G +DV + N IS YA+C DL A +F + +R ++SWN+++AG + +++
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKR--DLISWNAIIAGYARREDRGEAMR 417
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
Y+ M G + T + LLS+ A G+++H + G + + N L++MY
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
+CG + A+ +F+G R +SW +MI+G+AQ G + A +LF M+ PD +T S
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++SGC ALELGK GL+ +V + NALI+MY +CGS+ DAR +F++L +
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRD 597
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLR-PNRVTFLAVLQACTHTGFLEKGWAIS 469
V+SWT MI GCA GE ++A++LF Q+ R P+ TF ++L AC H G + +G+ I
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIF 657
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G+ P ++HY C+ LLGR + +EA + MP DA +W TLL AC+IH
Sbjct: 658 SSMESEYGVL--PTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIH 715
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
NI + E+ A KL + A Y+ ++N YA GRWD VA IR +M+ ++K PG+S
Sbjct: 716 GNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSW 775
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
++ F A DR H E+ Y L L++ E Y
Sbjct: 776 IEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGY 814
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 266/520 (51%), Gaps = 22/520 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + K LF +M+ PN +T+ I AC ++L + IH I+
Sbjct: 96 WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQII 155
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + KC L A ++F ++ RDV S+N ML +AQ +++ L
Sbjct: 156 KAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLG 215
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI D VT + L A L K +H + G+++D+ V ++
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C D+ A+ F GI +R VV +N+++A +G + +YR M +G L+ TT
Sbjct: 276 RCGDVDSAKQAFKGIADR--DVVVYNALIAALAQHGHNVEAFEQYYR-MRSDGVALNRTT 332
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+S+L++ +AL G+L+HSH G DV + N LISMY++CGD+ AR LF +
Sbjct: 333 YLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP 392
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R +SW A+I+GYA++ D EA+RL+ M++ G P VT L ++S C S A GK
Sbjct: 393 KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKM 452
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G+K N + NAL++MY +CGS+ +A+ +F + V+SW +MIAG A +G
Sbjct: 453 IHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+ A LF ++ +L P+ +TF +VL C + LE G I + + G+ + L
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH-GRITESGLQLDVNLG- 570
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + ++ R G L++A + S+ + D W ++ C
Sbjct: 571 -NALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC 608
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 257/520 (49%), Gaps = 36/520 (6%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYK 96
E + T+ + + C + L ++ IH +V++ +VKC + A++
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F EM RDV SWN+++ +AQ GF + +LF M+ G + +T + + A
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +HS I G D V N+ +S Y KC DL A VF GI R VVS+N+M+
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP--RDVVSYNTML 201
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ L + M G D T ++LL +F P L +G+ +H + G +
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
D+ V L++M +CGD+DSA+ F GI DR V + A+I+ AQ G EA ++ M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G + T LS+++ C S ALE GK ++ G +V + NALI MY++CG +
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
ARELFY +P++ ++SW +IAG A + EA+ L+ Q+ ++P RVTFL +L AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 457 THTGFLEKGWAISIIQYDD---KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
++ G I ++D GI N L + + ++ R G L EA + + +
Sbjct: 442 ANSSAYADGKMI----HEDILRSGIKSNGHL--ANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFK------LEP 547
D W +++ H + E AY LF+ LEP
Sbjct: 496 -DVISWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEP 530
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 332/630 (52%), Gaps = 22/630 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + + + L++QM+ ++P +TF + AC S +MIH I+
Sbjct: 454 WNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDIL 513
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + +C + A +F+ RD+ SWN+M+ G AQ G E +
Sbjct: 514 RSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYK 573
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ G++ D +T + + + L L + +H I G+ DV++ N I+ Y
Sbjct: 574 LFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYI 633
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF--YRHMMYNGFRLDVT 245
+C L+ A VF + R R V+SW +M+ G + D+ +D F + M +GF+ +
Sbjct: 634 RCGSLQDAYEVFHSL--RHRNVMSWTAMIGG--FADQGEDRKAFELFWQMQNDGFKPVKS 689
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L + + L +G+ V +H ++ G++LD V N LIS YSK G + AR +FD +
Sbjct: 690 TFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKM 749
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+R +SW MI+GYAQ G AL+ + M+ G + + + +S+++ C ALE GK
Sbjct: 750 PNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGK 809
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
++ +V V ALI MY+KCGS+ +A+E+F EK VV+W MI A +G
Sbjct: 810 RVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHG 869
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ALD F+ + + ++P+ TF ++L AC H+G + +G I G+S P ++
Sbjct: 870 LASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLS--PTIE 927
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY C+ LLGR G+ +EA + MP DA +W TLL AC+IH N+ + E+ A KL
Sbjct: 928 HYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKL 987
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+ A YV ++N YA GRWD VA IR +M+ ++K PG+S ++ F A DR
Sbjct: 988 NARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRS 1047
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKWI 635
H E+ Y L L+L YS +++
Sbjct: 1048 HPETAEIYEELKRLSLEMERAGYSPDTQYV 1077
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 261/503 (51%), Gaps = 19/503 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + K LF +M+ P+ +T+ I AC ++L Y + IH I+
Sbjct: 151 WNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKII 210
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC+ L A ++F + RDV S+N ML +AQ ++E +
Sbjct: 211 EAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIG 270
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI D VT + L A L K +H ++ G+++D+ V + +
Sbjct: 271 LFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFV 330
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C D+ A+ +R VV +N+++A ++++ Y M +G ++ TT
Sbjct: 331 RCGDVAGAKQALEAFADR--DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTY 388
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+S+L++ +AL G L+HSH G DV + N+LISMY++CGD+ AR LF+ +
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPK 448
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R +SW A+I+GYA++ D EA++L+ M++ G P VT L ++S C S A GK
Sbjct: 449 RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G+K N + NAL++MY +CGSI +A+ +F + ++SW +MIAG A +G +
Sbjct: 509 HEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSY 568
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
A LF ++ + L P+++TF +VL C + LE G I ++ + G+ + L +
Sbjct: 569 EAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES-GLQLDVNLGN- 626
Query: 488 SCMADLLGRKGKLKEALDFVQSM 510
+ ++ R G L++A + S+
Sbjct: 627 -ALINMYIRCGSLQDAYEVFHSL 648
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 241/467 (51%), Gaps = 17/467 (3%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
IYR ++ +N+ + K + + LF QM I P+ +T+ + A S L
Sbjct: 244 IYRRDVVS-YNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE 302
Query: 73 SQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ IH G + + FV+C + A + + A RDV +NA++ AQ
Sbjct: 303 GKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQ 362
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G E +Y MR G+ + T + + A +K L + +HS +G +DV +
Sbjct: 363 HGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQI 422
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N+ IS YA+C DL A +F + +R ++SWN+++AG + +++ Y+ M
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMPKR--DLISWNAIIAGYARREDRGEAMKLYKQMQSE 480
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + T + LLS+ A G+++H + G + + N L++MY +CG I A
Sbjct: 481 GVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEA 540
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ +F+G R +SW +MI+G+AQ G + A +LF M+ G PD +T S++ GC
Sbjct: 541 QNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNP 600
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
ALELG+ GL+ +V + NALI+MY +CGS+ DA E+F++L + V+SWT MI
Sbjct: 601 EALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMI 660
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
G A GE +A +LF Q+ +P + TF ++L+AC + L++G
Sbjct: 661 GGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEG 707
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/561 (27%), Positives = 267/561 (47%), Gaps = 31/561 (5%)
Query: 2 AVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLL---LFRQMKQNDIEPNNLTFP 58
+V P NR + ++ + V ++E H+ L + E N +
Sbjct: 27 SVRPWPAEQNRSSTGAAGGASSNLVSVKVMRDEQHRGSEREDLSNAYQPRPTETNRAAYV 86
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVR 104
+ + C + L ++ IH +V++ +VKC + A+++F +M R
Sbjct: 87 DLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRR 146
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
DV SWN+++ +AQ GF + +LF M+ G +T + + A L K +H
Sbjct: 147 DVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIH 206
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
S I G D V N+ ++ Y KC+DL A VF GI R VVS+N+M+
Sbjct: 207 SKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYR--RDVVSYNTMLGLYAQKAY 264
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
++ + + M G D T ++LL +F P L +G+ +H ++ G + D+ V
Sbjct: 265 VEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTA 324
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L +M+ +CGD+ A+ + DR V + A+I+ AQ G +EA ++ M + G + +
Sbjct: 325 LATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMN 384
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T LS+++ C S AL G+ ++ G +V + N+LI MY++CG + ARELF
Sbjct: 385 RTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFN 444
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+P++ ++SW +IAG A + EA+ L+ Q+ ++P RVTFL +L ACT++
Sbjct: 445 TMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSD 504
Query: 465 GWAISIIQYD--DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
G +I D GI N L + + ++ R G + EA + + + D W ++
Sbjct: 505 G---KMIHEDILRSGIKSNGHLAN--ALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSM 558
Query: 523 LCACKIHLNIEIGEYVAYCLF 543
+ H + E AY LF
Sbjct: 559 IAGHAQHGSYE----AAYKLF 575
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 258/530 (48%), Gaps = 47/530 (8%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVK 87
+ QM+ + + N T+ + AC+ L ++IH HI + S + +
Sbjct: 373 YYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYAR 432
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C L A ++F+ M RD+ SWNA++ G+A+ ++L+ M+ G++ VT + L
Sbjct: 433 CGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHL 492
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A ++ S K +H + G+ ++ + N ++ Y +C + A+ VF G R R
Sbjct: 493 LSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGT--RAR 550
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
++SWNSM+AG ++ + + M G D T S+L PEAL GR +H
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH 610
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
I G LDV++ N LI+MY +CG + A +F + R +SWTAMI G+A +G+
Sbjct: 611 MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDR 670
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
+A LF+ M+ G P T S++ C S L+ GK + + G + + V NALI
Sbjct: 671 KAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALI 730
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
YSK GS+ DAR++F +P + ++SW MIAG A NG AL +Q+ E + N+
Sbjct: 731 SAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKF 790
Query: 448 TFLAVLQACTHTGFLEKGWAI--SIIQYDDKG--------ISYNPE----------LDHY 487
+F+++L AC+ LE+G + I++ +G IS + D++
Sbjct: 791 SFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF 850
Query: 488 S--------CMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCAC 526
+ M + + G +ALDF M IK D + ++L AC
Sbjct: 851 TEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSAC 900
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 17/304 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + W + I ++ E K LF QM+ + +P TF I KAC + L +
Sbjct: 649 RHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGK 708
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ HI+ S + K + A K+FD+M RD+ SWN M+ G+AQ G
Sbjct: 709 KVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNG 768
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L+ Y M+ G+ + + + + A L K VH+ + + DV V
Sbjct: 769 LGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGA 828
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
IS YAKC L+ A+ VF E + VV+WN+M+ +L+F+ M G
Sbjct: 829 ALISMYAKCGSLEEAQEVFDNFTE--KNVVTWNAMINAYAQHGLASKALDFFNCMDKEGI 886
Query: 241 RLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D +T S+LS+ +++G R+ S +G + L+ + + G A
Sbjct: 887 KPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAE 946
Query: 300 VLFD 303
L +
Sbjct: 947 TLIN 950
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 338/629 (53%), Gaps = 21/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + E + ++ LF++M + +E ++ TF ++K+ + L + + +HG I+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F +K R+D A K+FDEM RDV SWN+++ G+ G E L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M + GI+ D T++ + ++ +SL ++VHS G+ + CNT + Y+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A+ VF + +R +VVS+ SM+AG +++ + M G DV TV
Sbjct: 343 KCGDLDSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++L+ L +G+ VH D+ V N L+ MY+KCG + A ++F +
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW +I GY++ +EAL LF +E PD TV ++ C A + G+
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y G + V N+L+DMY+KCG++ A LF + K +VSWT MIAG ++G
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELD 485
EA+ LF+Q+ + + + ++F+++L AC+H+G +++GW +I++++ K P ++
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK---IEPTVE 637
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ D+L R G L +A F+++MPI DA IWG LLC C+IH ++++ E VA +F+L
Sbjct: 638 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP + YV MAN YA +W+ V +R + + ++K PG S I G+ F A D
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 757
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
+ E+E L + EE YS K+
Sbjct: 758 NPETENIEAFLRKVRARMIEEGYSPLTKY 786
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 229/466 (49%), Gaps = 19/466 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ N+Q+R + L + DI+P T + + CA L + +
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVD 117
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I + FV C L A ++FDE+ + WN ++ A+ G
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M G++ D T ++++ + + + +H F + G SV N+ +
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV 237
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y K + A VF + ER V+SWNS++ G + L+ + M+ +G +D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTER--DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ T+VS+ + + GR VHS G+ F + NTL+ MYSKCGD+DSA+ +F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ DR+ VS+T+MI+GYA++G EA++LF ME G PD+ TV ++++ C + L+
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK + L ++ V NAL+DMY+KCGS+ +A +F + K ++SW T+I G +
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 424 NGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAI 468
N EAL LF+ L+E P+ T VL AC +KG I
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D T+ S+L ++L G+ V + GF +D ++ + L MY+ CGD+ A +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + W +++ A+ GD ++ LF M ++G D T + ++
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ + G + V N+L+ Y K + AR++F + E+ V+SW ++I G
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ----YDDKG 477
NG + L +F Q++ + + T ++V C + + G A+ I + +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALD 505
N LD YS DL K +E D
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSD 359
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 338/629 (53%), Gaps = 21/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + E + ++ LF++M + +E ++ TF ++K+ + L + + +HG I+
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F +K R+D A K+FDEM RDV SWN+++ G+ G E L
Sbjct: 72 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M + GI+ D T++ + ++ +SL ++VHS G+ + CNT + Y+
Sbjct: 132 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 191
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A+ VF + +R +VVS+ SM+AG +++ + M G DV TV
Sbjct: 192 KCGDLDSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 249
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++L+ L +G+ VH D+ V N L+ MY+KCG + A ++F +
Sbjct: 250 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW +I GY++ +EAL LF +E PD TV ++ C A + G+
Sbjct: 310 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 369
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y G + V N+L+DMY+KCG++ A LF + K +VSWT MIAG ++G
Sbjct: 370 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 429
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELD 485
EA+ LF+Q+ + + + ++F+++L AC+H+G +++GW +I++++ K P ++
Sbjct: 430 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK---IEPTVE 486
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ D+L R G L +A F+++MPI DA IWG LLC C+IH ++++ E VA +F+L
Sbjct: 487 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 546
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP + YV MAN YA +W+ V +R + + ++K PG S I G+ F A D
Sbjct: 547 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 606
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
+ E+E L + EE YS K+
Sbjct: 607 NPETENIEAFLRKVRARMIEEGYSPLTKY 635
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 198/372 (53%), Gaps = 3/372 (0%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
FDE+ + WN ++ A+ G + LF M G++ D T ++++ + +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ +H F + G SV N+ ++ Y K + A VF + ER V+SWNS++
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER--DVISWNSIIN 118
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G + L+ + M+ +G +D+ T+VS+ + + GR VHS G+ F
Sbjct: 119 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 178
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+ NTL+ MYSKCGD+DSA+ +F + DR+ VS+T+MI+GYA++G EA++LF ME
Sbjct: 179 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 238
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G PD+ TV ++++ C + L+ GK + L ++ V NAL+DMY+KCGS+
Sbjct: 239 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQAC 456
+A +F + K ++SW T+I G + N EAL LF+ L+E P+ T VL AC
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358
Query: 457 THTGFLEKGWAI 468
+KG I
Sbjct: 359 ASLSAFDKGREI 370
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 19/250 (7%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ + S I + A + + LF +M++ I P+ T + CA+ L + +H
Sbjct: 210 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 269
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I ++ + KC + A +F EM V+D+ SWN ++ G+++ +
Sbjct: 270 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 329
Query: 124 NVLRLFYNMRL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L LF N+ L D TV + A + +H + + G +D V N+
Sbjct: 330 EALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 388
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YAKC L +A ++F I + +VSW M+AG +++ + M G
Sbjct: 389 LVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 446
Query: 242 LDVTTVVSLL 251
D + VSLL
Sbjct: 447 ADEISFVSLL 456
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 4/208 (1%)
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + W +++ A+ GD ++ LF M ++G D T + ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ + G + V N+L+ Y K + AR++F + E+ V+SW ++I G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ----YDDKG 477
NG + L +F Q++ + + T ++V C + + G A+ I + +
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALD 505
N LD YS DL K +E D
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSD 208
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 340/634 (53%), Gaps = 22/634 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDI---EPNNLTFPFIAKACAKLSDLIYSQ 74
T+ WN+ +R + + +TL LF QM + + P+N T K+C+ L L +
Sbjct: 66 TVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGK 125
Query: 75 MIHGHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
MIHG + K + KC +++ A K+F E DV W +++ G+ Q G
Sbjct: 126 MIHGFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGS 185
Query: 122 LENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
E L F M ++ + D VT++ A +L +SVH F G D + + N
Sbjct: 186 PELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLAN 245
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ ++ Y K +++A +F E + ++SW+SMVA ++LN + M+
Sbjct: 246 SILNLYGKTGSIRIAANLF--REMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRI 303
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
L+ TV+S L + L +G+ +H ++YGF+LD++V L+ MY KC ++A
Sbjct: 304 ELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIE 363
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LF+ + + VSW + SGYA+ G ++L +F M + G PD + ++ +++ + G
Sbjct: 364 LFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGI 423
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
++ + G +N + +LI++Y+KC SI +A ++F L VV+W+++IA
Sbjct: 424 VQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAA 483
Query: 421 CALNGEFVEALDLFHQLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+G+ EAL L HQ+ D++PN VTF+++L AC+H G +E+G + + ++ +
Sbjct: 484 YGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLM 543
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P ++HY M DLLGR G+L +ALD + +MP+++ +WG LL AC+IH NI+IGE A
Sbjct: 544 --PNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAA 601
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF L+P+ A Y ++N Y + W A +RT++K N++KK GQS+ I + +F
Sbjct: 602 LNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSF 661
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
A DR+H ES+ Y +L L REE Y L+
Sbjct: 662 IASDRFHGESDQIYEMLRKLDARMREEGYDPDLQ 695
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 182/376 (48%), Gaps = 7/376 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI---QADFVTVMGLTQA 150
A+K+F+E + V WNA+L + G L LF+ M + + D TV ++
Sbjct: 55 AHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKS 114
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ L L K +H F + +D+D+ V + I Y+KC + A VF E VV
Sbjct: 115 CSGLQKLELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFT--EYPKPDVV 171
Query: 211 SWNSMVAGCTYGDKFDDSLNFY-RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
W S++ G + +L F+ R ++ D T+VS S+ GR VH
Sbjct: 172 LWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGF 231
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
GFD + + N+++++Y K G I A LF + + +SW++M++ YA G A
Sbjct: 232 VKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNA 291
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L LF M + VTV+S + C S LE GK A + G + ++ V AL+DM
Sbjct: 292 LNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDM 351
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KC S +A ELF +P+K VVSW + +G A G ++L +F ++ RP+ +
Sbjct: 352 YLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIAL 411
Query: 450 LAVLQACTHTGFLEKG 465
+ +L A + G +++
Sbjct: 412 VKILAASSELGIVQQA 427
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 18/269 (6%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+HS + G LD V+ L +Y++ + A LF+ +T W A++ Y +G
Sbjct: 23 LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGK 82
Query: 326 LDEALRLFFAMEAAG---ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
E L LF M A E PD TV + C LELGK + + ++ V
Sbjct: 83 WVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMFV 141
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD- 441
+ALI++YSKCG + DA ++F P+ VV WT++I G NG AL F +++ L+
Sbjct: 142 GSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQ 201
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA----DLLGRK 497
+ P+ VT ++ AC G ++ G D C+A +L G+
Sbjct: 202 VSPDPVTLVSAASACAQLSDFNLGRSV-------HGFVKRRGFDTKLCLANSILNLYGKT 254
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
G ++ A + + MP K D W +++ AC
Sbjct: 255 GSIRIAANLFREMPYK-DIISWSSMV-AC 281
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/610 (33%), Positives = 320/610 (52%), Gaps = 18/610 (2%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP-------- 84
N + +++ Q + ++ + + K C K DL+ ++ +H I+KS
Sbjct: 7 NTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM 66
Query: 85 ------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
+++C RL A +FD + + ASWNAM+ G+ + E+ +RLF M G+Q
Sbjct: 67 NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ T M + +A L K VH+ H G+++DV V + Y KC + A +
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F + ++SW M+ ++ M GF+ + T VS+L++
Sbjct: 187 FDNLMNH--DIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL + VH H + G +LDV V L+ MY+K G ID ARV+FD + R VSW MI
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
+A+ G EA LF M+ G PD + LS+++ C +GALE K +A GL+
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV 364
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V V AL+ MYSK GSI DAR +F + + VVSW MI+G A +G +AL++F ++
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMT 424
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
++P+RVTF+AVL AC+H G +++G + + GI P++ H +CM DLLGR G
Sbjct: 425 AHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIE--PDVSHCNCMVDLLGRAG 482
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
+L EA F+ +M + D WG LL +C+ + N+E+GE VA KL+P +AA YV ++N
Sbjct: 483 RLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSN 542
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDC 618
YA G+WD V+ +RTMM+ ++K PG+S ++ K F D H E + D
Sbjct: 543 IYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDK 602
Query: 619 LALHSREEAY 628
+ + E Y
Sbjct: 603 VIEKIKAEGY 612
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 229/480 (47%), Gaps = 26/480 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WN+ I V A + LFR+M ++PN T+ I KACA LS L + + +H
Sbjct: 97 WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIR 156
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + + KC ++ A +IFD + D+ SW M+ +AQ G + R
Sbjct: 157 HGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYR 216
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G + + +T + + A L +K VH + G++ DV V + YA
Sbjct: 217 LMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYA 276
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + A +VF + ++R VVSWN M+ + ++ + + M G + D
Sbjct: 277 KSGSIDDARVVFDRM--KVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMF 334
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+S+L++ AL + +H H + G ++DV V L+ MYSK G ID ARV+FD +
Sbjct: 335 LSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV 394
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-W 366
R VSW AMISG AQ G +AL +F M A G PD VT ++++S C +G ++ G+
Sbjct: 395 RNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQ 454
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIAGCAL 423
+ G++ +V CN ++D+ + G + +A+ + P++ +W ++ C
Sbjct: 455 YLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDE--ATWGALLGSCRT 512
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK-GWAISIIQYDDKGISYNP 482
G + + ++LD + N T++ + G + W ++++ ++GI P
Sbjct: 513 YGNVELGELVAKERLKLDPK-NAATYVLLSNIYAEAGKWDMVSWVRTMMR--ERGIRKEP 569
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/621 (32%), Positives = 326/621 (52%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V + LF M+ + EPN T A SDL + +H V
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + KC LD +K+F M D+ +WN M+ G Q GF++ L
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M+ GI+ D VT++ L A + K +H + + V DV + + + Y
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYF 394
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++MA+ V+ + VV ++M++G +++ +R+++ G R + +
Sbjct: 395 KCRAVRMAQSVY--DSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAI 452
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + A+ G+ +HS+ + ++ V + L+ MY+KCG +D + +F I
Sbjct: 453 ASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISA 512
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V+W +MIS +AQ G+ +EAL LF M G VT+ S++S C A+ GK
Sbjct: 513 KDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEI 572
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G ++ ++ +ALIDMY KCG++ A +F ++PEK VSW ++IA G
Sbjct: 573 HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLV 632
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E++ L + E + + VTFLA++ AC H G +++G + ++ I+ P ++H+
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA--PRMEHF 690
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DL R GKL +A++ + MP K DAGIWG LL AC++H N+E+ E + LFKL+P
Sbjct: 691 ACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDP 750
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
H++ YV M+N A+ GRWDGV+ +R +MK +V+K PG S +N + F A D+ H
Sbjct: 751 HNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHP 810
Query: 608 ESELTYPVLDCLALHSREEAY 628
+SE Y L + L REE Y
Sbjct: 811 DSEDIYMSLKSILLELREEGY 831
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/539 (28%), Positives = 258/539 (47%), Gaps = 33/539 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH-- 77
WN IR + LL + +M + P++ TFP++ K+CA L + +++H
Sbjct: 112 WNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRT 171
Query: 78 ------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
G + + L A ++FD MA RD WN M+ G+ + G + +
Sbjct: 172 ARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSA 231
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF +MR G + +F T+ + L +H+ + G++++V+V NT +S
Sbjct: 232 VELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSM 291
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC L +F G+ R +V+WN M++GC D +L + M +G R D
Sbjct: 292 YAKCKCLDDGWKLF-GLMPR-DDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+VSLL + QG+ +H + + +DV +++ L+ +Y KC + A+ ++D
Sbjct: 350 TLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSS 409
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
V + MISGY G EA+++F + G P+ V + S++ C A++LG+
Sbjct: 410 KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQ 469
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+YA + V +AL+DMY+KCG + + +F + K V+W +MI+ A NG
Sbjct: 470 ELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNG 529
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
E EAL+LF ++ ++ + VT +VL AC + G I + KG +L
Sbjct: 530 EPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVI--KG-PIRADLF 586
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
S + D+ G+ G L+ A +SMP K++ W ++ I Y AY L K
Sbjct: 587 AESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSI-----------IASYGAYGLVK 633
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 187/426 (43%), Gaps = 22/426 (5%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVR 104
+ + C S L +HG V + +V R A +F +
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 105 DVA---SWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSL 159
A WN ++ G G + L + M D T + ++ ++L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ VH +G+D D+ V + I YA L A VF G+ ER V WN M+ G
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAER--DCVLWNVMMDGY 222
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
++ + M +G + T+ LS L G +H+ + YG + +V
Sbjct: 223 VKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEV 282
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+V NTL+SMY+KC +D LF + V+W MISG Q G +D+AL LF M+ +
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD VT++S++ GK Y + +V + +AL+D+Y KC ++ A
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMA 402
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+ ++ + VV +TMI+G LNG EA+ +F L+E +RPN V +VL AC
Sbjct: 403 QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASM 462
Query: 460 GFLEKG 465
++ G
Sbjct: 463 AAMKLG 468
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 209/612 (34%), Positives = 316/612 (51%), Gaps = 28/612 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I + L + QM Q+ + P+ TF I KAC+ L D+ + +H H++
Sbjct: 132 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F K + + A +F MA RD+ SW +M+ GF+Q+G+ L
Sbjct: 192 KSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 251
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-----KSVHSFGIHIGVDADVSVCNTW 182
F M G+ + G +A SLL + +H I G+ DV +
Sbjct: 252 YFKEMLHQGVYLPNEFIFGSVFSACS----SLLQPEYGRQLHGMSIKFGLGRDVFAGCSL 307
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YAKC L A +VF I +V+WN+++AG YG +++ F+ M + G
Sbjct: 308 CDMYAKCGLLSCARVVFYQIGRP--DLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIP 365
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D TV SLL + P L QG VH + G DLDV V NTL++MY+KC ++ A F
Sbjct: 366 DEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFF 425
Query: 303 DGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
+ + C+ VSW A+++ + +E RL M + PD +T+ +++ ++ ++
Sbjct: 426 EEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSI 485
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E+G YA GL + V N LID+Y+KCGS+ A ++F ++ VVSW+++I G
Sbjct: 486 EIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGY 545
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A G EAL LF + LD++PN VTF+ VL AC+H G +E+GW + + GI+
Sbjct: 546 AQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIA-- 603
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +H SCM DLL R G L EA F+ M D +W TLL ACK H N+++G+ A
Sbjct: 604 PTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAEN 663
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ K++P ++A +V + N YA G W+ VA +R++MK+ V+K PGQS + + F
Sbjct: 664 ILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFV 723
Query: 602 EDRYHAESELTY 613
ED H E Y
Sbjct: 724 EDSLHPERNKIY 735
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 221/487 (45%), Gaps = 28/487 (5%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEM 101
T+ ++ AC+ L L + + IH H++KS + KC L A K+FD M
Sbjct: 65 TYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM 124
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
R+V SW +++ G++Q G N L ++ M G+ D T + +A + L +
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+H+ + A + N IS Y K + + A VF + R ++SW SM+AG +
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMAT--RDLISWGSMIAGFSQ 242
Query: 222 GDKFDDSLNFYRHMMYNGFRLD----VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
++L +++ M++ G L +V S SS + PE GR +H I +G
Sbjct: 243 LGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE---YGRQLHGMSIKFGLGR 299
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV +L MY+KCG + ARV+F I V+W A+I+G+A GD EA+ F M
Sbjct: 300 DVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMR 359
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G +PD +TV S++ C L G Y GL +V VCN L+ MY+KC +
Sbjct: 360 HQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELR 419
Query: 398 DARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA F + +VSW ++ C + + E L + RP+ +T VL A
Sbjct: 420 DAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGAS 479
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
T +E G + N + + + DL + G LK A SM I D
Sbjct: 480 AETVSIEIGNQVHCYALK---TGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM-INPDV 535
Query: 517 GIWGTLL 523
W +L+
Sbjct: 536 VSWSSLI 542
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 201/435 (46%), Gaps = 11/435 (2%)
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLF-YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
+R S N + + ++ F + + G T L A + + L K
Sbjct: 24 LRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGK 83
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+H + D+++ N ++ Y KC LK A+ VF + E R VVSW S++AG +
Sbjct: 84 KIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPE--RNVVSWTSVIAGYSQ 141
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+ ++L FY M+ +G D T S++ + + GR +H+H + F +
Sbjct: 142 NGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIA 201
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG- 340
N LISMY+K I A +F + R +SW +MI+G++Q G EAL F M G
Sbjct: 202 QNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGV 261
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
LP+ S+ S C E G+ + GL +V +L DMY+KCG + AR
Sbjct: 262 YLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCAR 321
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+FY + +V+W +IAG A G+ EA+ F Q+ L P+ +T ++L ACT
Sbjct: 322 VVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPS 381
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGI 518
L +G + + Y +K +LD C + + + +L++A+ F + M +D
Sbjct: 382 ELYQG--MQVHGYINK---MGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVS 436
Query: 519 WGTLLCACKIHLNIE 533
W +L AC H E
Sbjct: 437 WNAILTACMRHDQAE 451
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 133/255 (52%), Gaps = 2/255 (0%)
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQG 263
+LR S N + F++++ + + GF L ++T L+S+ +L G
Sbjct: 23 KLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHG 82
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ +H H + D+++ N +++MY KC + A+ +FD + +R VSWT++I+GY+Q
Sbjct: 83 KKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQN 142
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G AL +F M +G +PD T S+I C G + LG+ + +++
Sbjct: 143 GQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQ 202
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NALI MY+K I DA ++F + + ++SW +MIAG + G +EAL F +++ +
Sbjct: 203 NALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVY 262
Query: 444 -PNRVTFLAVLQACT 457
PN F +V AC+
Sbjct: 263 LPNEFIFGSVFSACS 277
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 132/271 (48%), Gaps = 22/271 (8%)
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R S I+ ++ +EA++ F F + G L T +IS C +LE GK
Sbjct: 25 RAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKK 84
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
++ ++ + N +++MY KC S+ DA+++F A+PE+ VVSWT++IAG + NG+
Sbjct: 85 IHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQ 144
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI----IQYDDKGISYNP 482
AL+ + Q+++ + P++ TF ++++AC+ G + G + ++ I+ N
Sbjct: 145 GGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNA 204
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG-EYVAYC 541
+ Y+ + + +ALD M + D WG+++ ++G E A C
Sbjct: 205 LISMYT-------KSNLIIDALDVFSRMATR-DLISWGSMIAGFS-----QLGYELEALC 251
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
FK H V + N++ G + +++
Sbjct: 252 YFKEMLHQG---VYLPNEFIFGSVFSACSSL 279
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 327/627 (52%), Gaps = 18/627 (2%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ T+ WN+ I + LFRQM +EP+ +TF + AC+ + L + +
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKE 179
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H +V + FV K +D A ++FD + +RDV+++N M+ G+A+ G
Sbjct: 180 VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGD 239
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E LFY M+ VG++ + ++ + + + L+ K+VH+ ++ G+ D+ V +
Sbjct: 240 WEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATS 299
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I Y C ++ A VF + ++R VVSW M+ G +D+ + M G +
Sbjct: 300 LIRMYTTCGSIEGARRVFDNM--KVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T + ++++ L R +HS GF D+ V L+ MY+KCG I AR +
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQV 417
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + R VSW+AMI Y + G EA F M+ + PD VT +++++ CG GAL
Sbjct: 418 FDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGAL 477
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
++G A L +V + NALI M +K GS+ AR +F + + V++W MI G
Sbjct: 478 DVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGY 537
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+L+G EAL LF ++++ RPN VTF+ VL AC+ GF+++G + +GI
Sbjct: 538 SLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIV-- 595
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P + Y CM DLLGR G+L EA ++SMP+K + IW +LL AC+IH N+++ E A
Sbjct: 596 PTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAER 655
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
++P+ A YV++++ YA G W+ VA +R +M+ ++K G + + GK TF
Sbjct: 656 CLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVV 715
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
EDR H Y L L + E Y
Sbjct: 716 EDRSHPLVGEIYAELARLMNAIKREGY 742
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 244/493 (49%), Gaps = 20/493 (4%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVK----------SPFVK----CDRLDCAYKIF 98
++ T+ + + C +L D + + HI++ + +K C + A +IF
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D + + V +WNA++ G+AQ+G ++ LF M G++ +T + + A L+
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
K VH+ + G +D + +S Y K + A VF G+ +R V ++N MV G
Sbjct: 176 WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH--IRDVSTFNVMVGG 233
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++ + + M G + + + +S+L PEAL G+ VH+ ++ G D
Sbjct: 234 YAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDD 293
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ V +LI MY+ CG I+ AR +FD + R VSWT MI GYA+ G++++A LF M+
Sbjct: 294 IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G PD +T + +++ C S L + + G +++V AL+ MY+KCG+I D
Sbjct: 354 EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKD 413
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
AR++F A+P + VVSW+ MI NG EA + FH + ++ P+ VT++ +L AC H
Sbjct: 414 ARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGH 473
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
G L+ G I +S+ P + M + G ++ A +M ++ D
Sbjct: 474 LGALDVGMEIYTQAIKADLVSHVPLGNALIIMN---AKHGSVERARYIFDTM-VRRDVIT 529
Query: 519 WGTLLCACKIHLN 531
W ++ +H N
Sbjct: 530 WNAMIGGYSLHGN 542
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 309/545 (56%), Gaps = 5/545 (0%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ CA K+FD+ DV WNA++ +++ GF + + ++ M++ + D + + +A
Sbjct: 123 VSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKA 182
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
L + + VH G ++DV V N ++ YAKC ++ A VF + +R T+V
Sbjct: 183 CSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDR--TIV 240
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW S+++G + ++L + M R D +VS+L ++ E L G+ +H
Sbjct: 241 SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCV 300
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
I G + + ++ +L S+Y+KCG + AR+ F+ + + + + W AMISGY + G +EA+
Sbjct: 301 IKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAI 360
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M++ PD +TV S I+ C Q G+LEL +W D Y +++V+V +LID Y
Sbjct: 361 ELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTY 420
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
+KCGS+ AR +F +P+K VV W+ M+ G L+G+ E++ LFH + + + PN VTF+
Sbjct: 421 AKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFV 480
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
+L AC ++G +E+GW + + D GI P HY+C+ DLLGR G L A +FV +M
Sbjct: 481 GLLTACKNSGLVEEGWDL-FHRMRDYGI--EPRHQHYACVVDLLGRAGHLDRAYNFVMNM 537
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
PI+ +WG LL ACKIH ++ +GEY A LF L+P++ YV+++N YA WD VA
Sbjct: 538 PIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVA 597
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
+R +M+ + K G S+ INGK F A D+ H S+ + ++ L +E +
Sbjct: 598 KVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVP 657
Query: 631 HLKWI 635
H + +
Sbjct: 658 HTESV 662
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 199/418 (47%), Gaps = 17/418 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ +R + ++ +M+ + P+ +FP + KAC+ L L + +HG I
Sbjct: 141 WNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIF 200
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC + A +F + R + SW +++ G+AQ G LR
Sbjct: 201 RHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALR 260
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR ++ D++ ++ + +A + L KS+H I +G++ + + + S YA
Sbjct: 261 IFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYA 320
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + +A L F +E +++ WN+M++G ++++ +R M R D TV
Sbjct: 321 KCGHVMVARLFFNQVEN--PSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITV 378
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S +++ +L R + + F DV V +LI Y+KCG +D AR +FD I D
Sbjct: 379 TSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPD 438
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W+AM+ GY G E++ LF AM AG P+ VT + +++ C SG +E G
Sbjct: 439 KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDL 498
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+ G++ ++D+ + G + A +P E V W +++ C ++
Sbjct: 499 FHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 4/199 (2%)
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
G+ YG L I L++ S G++ AR LFD D W A++ Y++ G A
Sbjct: 102 GLQYGGFL----IAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHA 157
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+ ++ M+ A PD + ++ C ALE+G+ G + +V V N L+ +
Sbjct: 158 IEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVAL 217
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y+KCG I A +F L ++ +VSWT++I+G A NG+ +EAL +F ++ + ++RP+ +
Sbjct: 218 YAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIAL 277
Query: 450 LAVLQACTHTGFLEKGWAI 468
++VL+A T LE G +I
Sbjct: 278 VSVLRAYTDVEDLEHGKSI 296
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 17/317 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI W S I + + L +F +M++ ++ P+ + + +A + DL + + IH
Sbjct: 238 TIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIH 297
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G ++K S + KC + A F+++ + WNAM+ G+ + G+ E
Sbjct: 298 GCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAE 357
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M+ I+ D +TV A L L + + + DV V + I
Sbjct: 358 EAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLI 417
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+YAKC + MA VF I + + VV W++M+ G + +S+ + M G +
Sbjct: 418 DTYAKCGSVDMARFVFDRIPD--KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPN 475
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T V LL++ + +G + YG + ++ + + G +D A
Sbjct: 476 DVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVM 535
Query: 304 GICDRTRVS-WTAMISG 319
+ VS W A++S
Sbjct: 536 NMPIEPGVSVWGALLSA 552
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 202/621 (32%), Positives = 326/621 (52%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V + LF M+ + EPN T A SDL + +H V
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + KC LD +K+F M D+ +WN M+ G Q GF++ L
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M+ GI+ D VT++ L A + K +H + + V DV + + + Y
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYF 394
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++MA+ V+ + VV ++M++G +++ +R+++ G R + +
Sbjct: 395 KCRAVRMAQSVY--DSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAI 452
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + A+ G+ +HS+ + ++ V + L+ MY+KCG +D + +F I
Sbjct: 453 ASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISA 512
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V+W +MIS +AQ G+ +EAL LF M G VT+ S++S C A+ GK
Sbjct: 513 KDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEI 572
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G ++ ++ +ALIDMY KCG++ A +F ++PEK VSW ++IA G
Sbjct: 573 HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLV 632
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E++ L + E + + VTFLA++ AC H G +++G + ++ I+ P ++H+
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA--PRMEHF 690
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DL R GKL +A++ + MP K DAGIWG LL AC++H N+E+ E + LFKL+P
Sbjct: 691 ACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDP 750
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
H++ YV M+N A+ GRWDGV+ +R +MK +V+K PG S +N + F A D+ H
Sbjct: 751 HNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHP 810
Query: 608 ESELTYPVLDCLALHSREEAY 628
+SE Y L + L REE +
Sbjct: 811 DSEDIYMSLKSILLELREEGH 831
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/539 (28%), Positives = 258/539 (47%), Gaps = 33/539 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEP--NNLTFPFIAKACAKLSDLIYSQMIH-- 77
WN IR + LL + +M + P ++ TFP++ K+CA L + +++H
Sbjct: 112 WNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRT 171
Query: 78 ------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
G + + L A ++FD MA RD WN M+ G+ + G + +
Sbjct: 172 ARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSA 231
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF +MR G + +F T+ + L +H+ + G++++V+V NT +S
Sbjct: 232 VELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSM 291
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC L +F G+ R +V+WN M++GC D +L + M +G R D
Sbjct: 292 YAKCKCLDDGWKLF-GLMPR-DDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+VSLL + QG+ +H + + +DV +++ L+ +Y KC + A+ ++D
Sbjct: 350 TLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSS 409
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
V + MISGY G EA+++F + G P+ V + S++ C A++LG+
Sbjct: 410 KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQ 469
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+YA + V +AL+DMY+KCG + + +F + K V+W +MI+ A NG
Sbjct: 470 ELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNG 529
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
E EAL+LF ++ ++ + VT +VL AC + G I + KG +L
Sbjct: 530 EPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVI--KG-PIRADLF 586
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
S + D+ G+ G L+ A +SMP K++ W ++ I Y AY L K
Sbjct: 587 AESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSI-----------IASYGAYGLVK 633
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 187/426 (43%), Gaps = 22/426 (5%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVR 104
+ + C S L +HG V + +V R A +F +
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 105 DVA---SWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSL 159
A WN ++ G G + L + M D T + ++ ++L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ VH +G+D D+ V + I YA L A VF G+ ER V WN M+ G
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAER--DCVLWNVMMDGY 222
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
++ + M +G + T+ LS L G +H+ + YG + +V
Sbjct: 223 VKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEV 282
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+V NTL+SMY+KC +D LF + V+W MISG Q G +D+AL LF M+ +
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD VT++S++ GK Y + +V + +AL+D+Y KC ++ A
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMA 402
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+ ++ + VV +TMI+G LNG EA+ +F L+E +RPN V +VL AC
Sbjct: 403 QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASM 462
Query: 460 GFLEKG 465
++ G
Sbjct: 463 AAMKLG 468
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 202/621 (32%), Positives = 324/621 (52%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + + + LFR M+ + EPN T CA +DL+ +H V
Sbjct: 210 WNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAV 269
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + KC LD A+++F+ + D+ +WN M+ G Q G L+ L
Sbjct: 270 KCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALG 329
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M G + D VT++ L A L K VH + I V D + + + Y
Sbjct: 330 LFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYF 389
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A ++ R VV +++++G + +L +R+++ + + TV
Sbjct: 390 KCRDVRTARNLYDA--ARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTV 447
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + AL G+ +H + + ++ V + L+ MY+KCG +D + +F +
Sbjct: 448 ASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSL 507
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V+W +MIS ++Q G+ EAL LF M G + VT+ S +S C A+ GK
Sbjct: 508 KDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEI 567
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G +K ++ +ALIDMY+KCG++ A +F +P+K VSW ++I+ +G
Sbjct: 568 HGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLV 627
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E++ H++ E +P+ VTFLA++ AC H G +E+G + + Q K P ++H+
Sbjct: 628 KESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEG--LQLFQCMTKEYLIAPRMEHF 685
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DL R G+L +A+ F+ MP K DAGIWG LL AC++H N+E+ + + LFKL+P
Sbjct: 686 ACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDP 745
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV M+N A+ GRWDGV+ +R +MK N++ K PG S +N + F A D+ H
Sbjct: 746 GNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHP 805
Query: 608 ESELTYPVLDCLALHSREEAY 628
ESE Y L L REE Y
Sbjct: 806 ESEDIYTSLKALLQELREEGY 826
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 255/527 (48%), Gaps = 28/527 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDI--EPNNLTFPFIAKACAKLSDLIYSQMIH-- 77
WN IR +L + +M + P+ T P++ K+CA L + +++H
Sbjct: 107 WNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRT 166
Query: 78 ------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
G + + L A FD M RD WN M+ G+ + G +
Sbjct: 167 ARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGA 226
Query: 126 LRLFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+RLF NMR+ G + +F T+ L+ A A LS ++ +HS + G++ +V+V NT +S
Sbjct: 227 VRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQ-LHSLAVKCGLEQEVAVANTLLS 285
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC L A +F + +V+WN M++GC D++L + M+ +G R D
Sbjct: 286 MYAKCRCLDDAWRLFELLPR--DDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDS 343
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+VSLL + L QG+ VH + I +D +++ L+ +Y KC D+ +AR L+D
Sbjct: 344 VTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDA 403
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
V + +ISGY G ++AL++F + P+ VTV S++ C AL LG
Sbjct: 404 ARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLG 463
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ Y + V +AL+DMY+KCG + + +F + K V+W +MI+ + N
Sbjct: 464 QEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQN 523
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNP 482
GE EALDLF Q+ ++ N VT + L AC + G I II+ K
Sbjct: 524 GEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKA----- 578
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ S + D+ + G ++ AL + MP K++ W +++ A H
Sbjct: 579 DIFAESALIDMYAKCGNMELALRVFEFMPDKNEVS-WNSIISAYGAH 624
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 206/609 (33%), Positives = 318/609 (52%), Gaps = 18/609 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I L +F +M+ + P+ +T + ACA + DL + +H +++
Sbjct: 212 FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLL 271
Query: 82 K---SP-----------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K SP +VKC + A +IF +V WN MLV + Q+ L
Sbjct: 272 KAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFD 331
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G++ + T L + +A ++L + +H I G ++D+ V I Y+
Sbjct: 332 LFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYS 391
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L A + +E + VVSW SM+AG + ++L ++ M G D +
Sbjct: 392 KYGWLDKARRILEVLEAK--DVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGL 449
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S +S+ +A+ QG+ +HS G+ DVS+ N L+++Y++CG A LF+ I
Sbjct: 450 ASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEH 509
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +++W M+SG+AQ G +EAL +F M AG ++ T +S IS ++ GK
Sbjct: 510 KDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQI 569
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G V NALI +Y KCGSI DA+ F+ + E+ VSW T+I C+ +G
Sbjct: 570 HATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWG 629
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+EALDLF Q+ + L+PN VTF+ VL AC+H G +E+G + GI +P DHY
Sbjct: 630 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGI--HPRPDHY 687
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ D+LGR G+L A FV+ MP+ ++A +W TLL AC++H NIEIGE A L +LEP
Sbjct: 688 ACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEP 747
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
H +A YV ++N YA+ G+W ++R MMK V+K PG+S + F DR H
Sbjct: 748 HDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHP 807
Query: 608 ESELTYPVL 616
+ Y L
Sbjct: 808 LAHQIYKYL 816
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 244/547 (44%), Gaps = 27/547 (4%)
Query: 2 AVSSLPPRLNRIYRSSTIN---QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFP 58
A L R R++ + W + + + + L+ QM + + P
Sbjct: 88 AKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLS 147
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVR 104
+ AC K + +++H + K +++ L A ++F EM
Sbjct: 148 SVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYC 207
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
D ++N ++ AQ G E+ L +F MRL G D VT+ L A L+ K +H
Sbjct: 208 DRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLH 267
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
S+ + G+ D + + + Y KC + A +F + VV WN M+
Sbjct: 268 SYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDR--TNVVLWNLMLVAYGQISD 325
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
S + + M+ G R + T LL + + G +H I GF+ D+ V
Sbjct: 326 LAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGV 385
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MYSK G +D AR + + + + VSWT+MI+GY Q EAL F M+ G PD
Sbjct: 386 LIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPD 445
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ + S IS C A+ G+ + G +V + NAL+++Y++CG +A LF
Sbjct: 446 NIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFE 505
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
A+ K ++W M++G A +G + EAL++F ++ + ++ N TF++ + A + +++
Sbjct: 506 AIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQ 565
Query: 465 GWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
G I ++I+ E + + + L G+ G +++A M ++ W T+
Sbjct: 566 GKQIHATVIK-----TGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVS-WNTI 619
Query: 523 LCACKIH 529
+ +C H
Sbjct: 620 ITSCSQH 626
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 213/449 (47%), Gaps = 8/449 (1%)
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
I G+++ + K + A ++F++++ RD SW AML G+A+ G E + L++ M
Sbjct: 78 IAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCS 137
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G+ + + A A + VH+ G ++ V N I+ Y + L +A
Sbjct: 138 GVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLA 197
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
E VF + R V++N++++ + +L + M +G+ D T+ SLL++
Sbjct: 198 ERVFSEMPYCDR--VTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACA 255
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WT 314
L +G+ +HS+ + G D + +L+ +Y KCG I A +F DRT V W
Sbjct: 256 SIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS-GDRTNVVLWN 314
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
M+ Y Q DL ++ LF M AAG P+ T ++ C +G + LG+ +
Sbjct: 315 LMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKT 374
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G + ++ V LIDMYSK G + AR + L K VVSWT+MIAG + EAL+ F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
+ + P+ + + + AC + +G I Y Y+ ++ ++ + +L
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVS---GYSADVSIWNALVNLY 491
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
R G+ KEA +++ K D W ++
Sbjct: 492 ARCGRSKEAFSLFEAIEHK-DKITWNGMV 519
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 202/431 (46%), Gaps = 21/431 (4%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLF----YNMRLVGIQADFVTVMGLTQAAIHAKH 156
M R AS N L GF E +L LF R +G DF + + ++ KH
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLG-SVDFACALRECRGSV--KH 57
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
L+ +H+ I G+ D N I YAK ++ A VF E+L R VSW +
Sbjct: 58 WPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVF----EQLSARDNVSWVA 113
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M++G ++++ Y M +G + S+LS+ QGRLVH+ G
Sbjct: 114 MLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQG 173
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ V N LI++Y + G + A +F + RV++ +IS +AQ G+ + AL +F
Sbjct: 174 SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFE 233
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M +G PD VT+ S+++ C G L GK +Y G+ + ++ +L+D+Y KCG
Sbjct: 234 EMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCG 293
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
I +A E+F + VV W M+ + ++ DLF Q++ +RPN T+ +L+
Sbjct: 294 VIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLR 353
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPI 512
CT+ G + G I ++ I E D Y + D+ + G L +A ++ +
Sbjct: 354 TCTYAGEINLGEQIHLLS-----IKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEA 408
Query: 513 KSDAGIWGTLL 523
K D W +++
Sbjct: 409 K-DVVSWTSMI 418
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/630 (32%), Positives = 336/630 (53%), Gaps = 23/630 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDI---EPNNLTFPFIAKACAKLSDLIYSQ 74
T+ WN+ +R + + +TL LF QM + I P+N T K+C+ L L +
Sbjct: 66 TVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGK 125
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
MIHG + K + KC +++ A K+F E +DV W +++ G+ Q G
Sbjct: 126 MIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNG 185
Query: 121 FLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
E L F M ++ + D VT++ A +L +SVH F G D + +
Sbjct: 186 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 245
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ ++ Y K ++ A +F E + ++SW+SMVA ++LN + M+
Sbjct: 246 NSILNLYGKTGSIRSAANLF--REMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKR 303
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
L+ TV+S L + L +G+ +H ++YGF+LD++V L+ MY KC +A
Sbjct: 304 IELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAI 363
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF+ + + VSW + SGYA+ G ++L +F M + G PD + ++ +++ + G
Sbjct: 364 DLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELG 423
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
++ + G +N + +LI++Y+KC SI +A ++F + K VV+W+++IA
Sbjct: 424 IVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIA 483
Query: 420 GCALNGEFVEALDLFHQLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+G+ EAL LF+Q+ D++PN VTF+++L AC+H G +E+G + + ++ +
Sbjct: 484 AYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQL 543
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
P +HY M DLLGR G+L +ALD + MP+++ +WG LL AC+IH NI+IGE
Sbjct: 544 M--PNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELA 601
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A LF L+P+ A Y ++N Y + W A +RT++K N+ KK GQS+ I + +
Sbjct: 602 ALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHS 661
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAY 628
F A DR+H ES+ Y +L L +EE Y
Sbjct: 662 FIASDRFHGESDQIYGMLRKLDARMKEEGY 691
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 213/460 (46%), Gaps = 13/460 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI---QADFVTVMGLTQA 150
A+K+F+E + V WNA+L + G L LF+ M I + D TV ++
Sbjct: 55 AHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKS 114
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ L L K +H F +D D+ V + I Y+KC + A VF E + VV
Sbjct: 115 CSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFT--EYPKQDVV 172
Query: 211 SWNSMVAGCTYGDKFDDSLNFY-RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
W S++ G + +L F+ R ++ D T+VS S+ GR VH
Sbjct: 173 LWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGF 232
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
GFD + + N+++++Y K G I SA LF + + +SW++M++ YA G A
Sbjct: 233 VKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNA 292
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L LF M + VTV+S + C S LE GK A + G + ++ V AL+DM
Sbjct: 293 LNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDM 352
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KC S +A +LF +P+K VVSW + +G A G ++L +F ++ RP+ +
Sbjct: 353 YMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIAL 412
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+ +L A + G +++ A+ + + K N E S + +L + + A +
Sbjct: 413 VKILAASSELGIVQQ--ALCLHAFVSKSGFDNNEFIGAS-LIELYAKCSSIDNANKVFKG 469
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
M + D W +++ A H GE +++ HS
Sbjct: 470 MR-RKDVVTWSSIIAAYGFHGQ---GEEALKLFYQMSNHS 505
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+HS + G D V+ L +Y++ + A LF+ +T W A++ Y +G
Sbjct: 23 LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGK 82
Query: 326 LDEALRLFFAMEAAG---ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
E L LF M A E PD TV + C LELGK + + +++ V
Sbjct: 83 WVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFV 142
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD- 441
+ALI++YSKCG + DA ++F P++ VV WT++I G NG AL F +++ L+
Sbjct: 143 GSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQ 202
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA----DLLGRK 497
+ P+ VT ++ AC G ++ G D C+A +L G+
Sbjct: 203 VSPDPVTLVSAASACAQLSDFNLGRSV-------HGFVKRRGFDTKLCLANSILNLYGKT 255
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
G ++ A + + MP K D W +++ AC
Sbjct: 256 GSIRSAANLFREMPYK-DIISWSSMV-AC 282
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/627 (33%), Positives = 330/627 (52%), Gaps = 28/627 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I +A+ ++++ QM ++ P+ LTF + KAC D+ + +H H++
Sbjct: 228 WTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVI 287
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F +++ A +F + +D+ SW M+ G+ Q+G+ L
Sbjct: 288 KSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALY 347
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVH----SFGIHIGVDADVSVCNTW 182
LF ++ G + G +A + L K VH FG+ V A S+C+
Sbjct: 348 LFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDM- 406
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YAK L A++ FC I+ +VSWN+++A +++++F+R M++ G
Sbjct: 407 ---YAKFGFLPSAKMAFCQIKNP--DIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTP 461
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D T +SLL + P L QGR +HS+ + GFD +++V N+L++MY+KC + A +F
Sbjct: 462 DSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVF 521
Query: 303 DGICDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
I VSW A++S QK E RL+ M +G PD +T+ +++ C + +L
Sbjct: 522 RDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSL 581
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+G Y+ GL +V VCN LIDMY+KCGS+ AR++F + +VSW+++I G
Sbjct: 582 GVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGY 641
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A G EAL+LF + L ++PN VT+L L AC+H G +E+GW + + GI
Sbjct: 642 AQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIP-- 699
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +H+SC+ DLL R G L EA F+Q + +D W TLL ACK H N++I E A
Sbjct: 700 PTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGN 759
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ KL+P ++A V + N +A G W+ VA +R +MK+ V+K PGQS + K F +
Sbjct: 760 ILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFS 819
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
ED H + L Y +L+ L ++ Y
Sbjct: 820 EDSSHPQRNLIYTMLEELWSQVLDDGY 846
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 220/491 (44%), Gaps = 28/491 (5%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYK 96
EP+ T+ + ACA L Y++ IH H++KS + KC + A K
Sbjct: 158 EPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARK 215
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD M + +V SW +M+ G++Q G + + ++ M G D +T + +A A
Sbjct: 216 VFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGD 275
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L + +H+ I ++ N IS Y ++ A VF I + ++SW +M+
Sbjct: 276 IDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPT--KDLISWGTMI 333
Query: 217 AGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
G ++L +R ++ G ++ + S+ S+ L G+ VH + +G
Sbjct: 334 TGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGL 393
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+V +L MY+K G + SA++ F I + VSW A+I+ +A GD +EA+ F
Sbjct: 394 RRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQ 453
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M G PD +T +S++ CG L G+ +Y G + VCN+L+ MY+KC
Sbjct: 454 MIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSH 513
Query: 396 IGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ DA +F + +VSW +++ C + E L+ ++ +P+ +T +L
Sbjct: 514 LHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLG 573
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMPI 512
C L G + I LD C + D+ + G LK A D S
Sbjct: 574 TCAELTSLGVGNQVHCYSIKSGLI-----LDVSVCNGLIDMYAKCGSLKHARDVFDSTQ- 627
Query: 513 KSDAGIWGTLL 523
D W +L+
Sbjct: 628 NLDIVSWSSLI 638
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 32/347 (9%)
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
F H+ + + +T SL+ + +L + +H H + + + + N +I+MY
Sbjct: 146 FDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYG 205
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
KCG + AR +FD + VSWT+MISGY+Q G ++A+ ++ M +G+ PD +T S
Sbjct: 206 KCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGS 265
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
+I C +G ++LG+ + ++ NALI MY+ G I A +F +P K
Sbjct: 266 VIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKD 325
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
++SW TMI G G VEAL LF L+ + +PN F +V AC+ LE G +
Sbjct: 326 LISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVH 385
Query: 470 II------------------QYDDKGI----------SYNPELDHYSCMADLLGRKGKLK 501
+ Y G NP++ ++ + G
Sbjct: 386 GMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDAN 445
Query: 502 EALDFVQSM---PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
EA+DF + M + D+ + +LLC C + + G + + K+
Sbjct: 446 EAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKI 492
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 19/334 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
++ I WN+ I + +A++ + FRQM + P+++T+ + C L +
Sbjct: 424 KNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGR 483
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQM 119
IH +IVK + + KC L A +F +++ ++ SWNA+L Q
Sbjct: 484 QIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQK 543
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
RL+ M G + D +T+ L L + VH + I G+ DVSVC
Sbjct: 544 KQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVC 603
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I YAKC LK A VF + +VSW+S++ G ++LN +R M G
Sbjct: 604 NGLIDMYAKCGSLKHARDVFDSTQN--LDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLG 661
Query: 240 FRLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ + T + LS+ + +G RL S +G + ++ + ++ G + A
Sbjct: 662 VQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEA 721
Query: 299 RVLFDGI-CDRTRVSWTAMISGYAQKGDLDEALR 331
D +W +++ ++D A R
Sbjct: 722 ETFIQKSGLDADITAWKTLLAACKTHNNVDIAER 755
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I R++ + WN+ + + K + +T L+++M + +P+++T + CA+L+ L
Sbjct: 524 ISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGV 583
Query: 73 SQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+H + +KS + KC L A +FD D+ SW++++VG+AQ
Sbjct: 584 GNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQ 643
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
G L LF M +G+Q + VT +G A H
Sbjct: 644 CGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSH 678
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 335/639 (52%), Gaps = 35/639 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ IR + H + L+R M + PN TFPF+ KAC+ L+DL + IH H
Sbjct: 67 YNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAA 126
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+++C R A +F +M +RDV +WNAML G+A G + +
Sbjct: 127 AVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 186
Query: 128 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLK--SVHSFGIHIGVDAD---VSVCNT 181
+M+ G++ + T++ L + A+H +L + SVH++ + +D + V +
Sbjct: 187 HLLDMQDRGGLRPNASTLVSLL--PLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTA 244
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF- 240
+ YAKC L A VF G+ +R V+W++++ G D+ ++ N ++ M+ G
Sbjct: 245 LLDMYAKCKHLVYACRVFHGMT--VRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMC 302
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
L T+V S L L G +H+ G D++ N+L+SMY+K G I+ A +
Sbjct: 303 FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATM 362
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LFD I + +S+ A++SGY Q G +EA +F M+A PD+ T++S+I C A
Sbjct: 363 LFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAA 422
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ G+ GL +CN+LIDMY+KCG I +R++F +P + +VSW TMIAG
Sbjct: 423 LQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG 482
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGI 478
++G EA LF + P+ VTF+ ++ AC+H+G + +G W +D
Sbjct: 483 YGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHW------FDTMTH 536
Query: 479 SYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
Y P ++HY CM DLL R G L EA F+QSMP+K+D +WG LL AC+IH NI++G+
Sbjct: 537 KYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGK 596
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
V+ + KL P +V ++N ++ GR+D A +R + K KK PG S ING
Sbjct: 597 QVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSL 656
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
F D+ H S Y LD + + ++ Y + ++
Sbjct: 657 HAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFV 695
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 212/465 (45%), Gaps = 21/465 (4%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
+ Q + HI + +L A ++FD + D ++NA++ ++ G + L+ +
Sbjct: 36 WQQELEQHIARG------QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRS 89
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M + + T + +A L +++H+ +G+ D+ V I Y +C
Sbjct: 90 MLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCAR 149
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSL 250
A VF + +R VV+WN+M+AG + ++ M G R + +T+VSL
Sbjct: 150 FGPAANVFAKMP--MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSL 207
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLD---VSVINTLISMYSKCGDIDSARVLFDGICD 307
L AL QG VH++ + D + V + L+ MY+KC + A +F G+
Sbjct: 208 LPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV 267
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LPDLVTVLSMISGCGQSGALELGKW 366
R V+W+A+I G+ + EA LF M G +V S + C L +G
Sbjct: 268 RNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ 327
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G+ ++ N+L+ MY+K G I +A LF + K +S+ +++G NG+
Sbjct: 328 LHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGK 387
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
EA +F ++ +++P+ T ++++ AC+H L+ G S+I +G++ +
Sbjct: 388 AEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVII---RGLALETSI 444
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G++ + MP + D W T++ IH
Sbjct: 445 --CNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIH 486
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 321/594 (54%), Gaps = 23/594 (3%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAY 95
++P++ T+P + KAC L ++ QMIH +VK + KC+ +CA
Sbjct: 102 LKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAV 161
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
K+FDEM +DVA WN ++ + Q G E LR F MR G + D VT+ +
Sbjct: 162 KLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L + +H ++ G D V + Y KC L+MA VF + + TVV+WNSM
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNK--TVVAWNSM 279
Query: 216 VAGCTYGDKFD--DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+ G YG K D + ++ M G + +TT+ S L + L++G+ VH + I
Sbjct: 280 ING--YGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRN 337
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
D+ + ++L+ +Y KCG ++SA +F + T VSW MISGY +G L +ALRLF
Sbjct: 338 RIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLF 397
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M + PD +T S+++ C Q ALE G+ N L +N +V AL+DMY+KC
Sbjct: 398 GEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKC 457
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G++ +A +F LPE+ +VSWT+MI +G EAL+LF ++++ +++P+RVTFLA+L
Sbjct: 458 GAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAIL 517
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP-I 512
AC+H G ++ G + GI P ++HYSC+ LLGR G+L EA + +QS P I
Sbjct: 518 SACSHAGLVDDGLYHFNQMINVYGII--PRIEHYSCLITLLGRAGRLHEAYEILQSNPEI 575
Query: 513 KSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
D + TL AC++H N+++G +A L +P ++ Y+ ++N YA G+WD V +
Sbjct: 576 SDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMV 635
Query: 573 RTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
R+ MK +KK PG S IN K F ED H E +L L H +E
Sbjct: 636 RSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMEDE 689
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 193/385 (50%), Gaps = 6/385 (1%)
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D ++ L +A++++K L K +H + +G+ DV VC IS Y C+ A+ VF
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPE 258
IE + N ++AG T +D++L + +M Y + D T S+L +
Sbjct: 62 DVIENPFEISLC-NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
+V G+++H+ + G +D+ V ++L+ MY+KC + + A LFD + D+ W +IS
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y Q G +EALR F M G PD VT+ + IS C + L+ G+ + G +
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRM 240
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ V AL+DMY KCG + A E+F +P K VV+W +MI G G+ + + LF ++
Sbjct: 241 DSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMY 300
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
++P T + L AC+ + L +G + ++ P++ S + DL + G
Sbjct: 301 SEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNR---IQPDIFLNSSLMDLYFKCG 357
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLL 523
K++ A + MP K+ W ++
Sbjct: 358 KVESAETIFKLMP-KTTTVSWNVMI 381
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 209/437 (47%), Gaps = 19/437 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + L F M++ EP+++T +CA+L DL + IH +V
Sbjct: 175 WNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELV 234
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F KC +L+ A ++F++M + V +WN+M+ G+ G + ++
Sbjct: 235 NSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQ 294
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G++ T+ A + L K VH + I + D+ + ++ + Y
Sbjct: 295 LFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYF 354
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ AE +F + + T VSWN M++G K D+L + M + D T
Sbjct: 355 KCGKVESAETIFKLMPK--TTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITF 412
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L++ AL +GR +H+ + + V+ L+ MY+KCG ++ A +F + +
Sbjct: 413 TSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE 472
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW- 366
R VSWT+MI+ Y G + EAL LF M + PD VT L+++S C +G ++ G +
Sbjct: 473 RDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYH 532
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--KIVVSWTTMIAGCALN 424
F+ G+ + + LI + + G + +A E+ + PE +T+ + C L+
Sbjct: 533 FNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLH 592
Query: 425 GEFVEALDLFHQLMELD 441
+++ L++ D
Sbjct: 593 KNLDLGVEIAENLIDKD 609
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 142/286 (49%), Gaps = 10/286 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D ++ LL + V ++L QG+++H + G DV V LIS+Y C D A+ +
Sbjct: 1 MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60
Query: 302 FDGICDRTRVSW-TAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSG 359
FD I + +S +++GY + DEAL LF + L PD T S++ CG
Sbjct: 61 FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+ LG+ GL +++V ++L+ MY+KC A +LF +P+K V W T+I+
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+G+F EAL F + P+ VT + +C L++G I + ++
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIH-----KELVN 235
Query: 480 YNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+D + + + D+ G+ G+L+ A++ + MP K+ W +++
Sbjct: 236 SGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVA-WNSMI 280
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 52/365 (14%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ T+ WNS I K + + LF++M ++P T AC++ + L+ +
Sbjct: 270 NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKF 329
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG+I+++ + KC +++ A IF M SWN M+ G+ G
Sbjct: 330 VHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGK 389
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L + LRLF M ++ D +T + A L + +H+ + + + V
Sbjct: 390 LFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGA 449
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YAKC ++ A VF + E R +VSW SM+ + ++L + M+ + +
Sbjct: 450 LLDMYAKCGAVEEAFGVFKCLPE--RDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVK 507
Query: 242 LDVTTVVSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D T +++LS+ C A LV L H N +I++Y
Sbjct: 508 PDRVTFLAILSA--CSHAGLVDDGLYH--------------FNQMINVY----------- 540
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS-MISGCGQSG 359
GI R ++ +I+ + G L EA + +++ E+ D +LS + S C
Sbjct: 541 ---GIIPRIE-HYSCLITLLGRAGRLHEAYEI---LQSNPEISDDFQLLSTLFSACRLHK 593
Query: 360 ALELG 364
L+LG
Sbjct: 594 NLDLG 598
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
++ +T WN I V + + L LF +M ++ +EP+ +TF + AC++L+ L
Sbjct: 367 KLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALE 426
Query: 72 YSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ IH IV+ + KC ++ A+ +F + RD+ SW +M+ +
Sbjct: 427 KGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYG 486
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G + L LF M ++ D VT + + A HA
Sbjct: 487 SHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHA 523
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 323/612 (52%), Gaps = 18/612 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I + L +F +M+ + + P+++T + AC+ + DL + +H +++
Sbjct: 212 FNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLL 271
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ +VK ++ A +IFD +V WN MLV + Q+ L
Sbjct: 272 KAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFD 331
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+FY M G++ + T + + H + L + +HS I G +D+ V I Y+
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYS 391
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L A+ + IEE+ VVSW SM+AG + ++L ++ M G D +
Sbjct: 392 KYGWLDKAQRILDMIEEK--DVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGL 449
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S +S+ +A+ QG +H+ G+ DVS+ N L+ +Y++CG A F+ I
Sbjct: 450 ASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEH 509
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++W +ISG+AQ G +EAL++F M+ AG ++ T +S IS ++ GK
Sbjct: 510 KEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQI 569
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G + NALI +Y KCGSI DA+ F+ + ++ VSW T+I C+ +G
Sbjct: 570 HARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRG 629
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+EALDLF Q+ + L+P+ VTF+ VL AC+H G +E+G ++ GI +P DHY
Sbjct: 630 LEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGI--HPRPDHY 687
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ D+LGR G+L A FV+ MPI +D+ +W TLL ACK+H N+EIGE+ A L +LEP
Sbjct: 688 ACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEP 747
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
H +A YV ++N YA+ G+W IR +MK V+K PG+S + F DR H
Sbjct: 748 HDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHP 807
Query: 608 ESELTYPVLDCL 619
++ Y L L
Sbjct: 808 LADQIYNFLSHL 819
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 245/542 (45%), Gaps = 31/542 (5%)
Query: 9 RLNRIYRSSTIN---QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
R R++ ++ W + + + + L+R+M ++ + P I AC
Sbjct: 95 RARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACT 154
Query: 66 KLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNA 111
K ++IH + K F ++C A ++F +M D ++N
Sbjct: 155 KTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNT 214
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
++ G AQ G + L +F M+L G+ D VT+ L A L K +HS+ + G
Sbjct: 215 LISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAG 274
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT-VVSWNSMVAGCTYGDKFDDSLN 230
+ D + + + Y K D++ A +F + RT VV WN M+ D S +
Sbjct: 275 MSLDYIMEGSLLDLYVKSGDIEEALQIF---DSGDRTNVVLWNLMLVAYGQIDDLAKSFD 331
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M+ G R + T +L + + G +HS I GF D+ V LI MYS
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYS 391
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
K G +D A+ + D I ++ VSWT+MI+GY Q EAL F M+A G PD + + S
Sbjct: 392 KYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLAS 451
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
IS C A+ G G +V + N L+ +Y++CG +A F A+ K
Sbjct: 452 AISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKE 511
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-- 468
++W +I+G A +G + EAL +F ++ + + N TF++ + A + +++G I
Sbjct: 512 GITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHA 571
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCACK 527
+I+ Y E + + + L G+ G +++A +DF + K + W T++ C
Sbjct: 572 RVIK-----TGYTSETEISNALISLYGKCGSIEDAKMDFFEM--TKRNEVSWNTIITCCS 624
Query: 528 IH 529
H
Sbjct: 625 QH 626
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 224/453 (49%), Gaps = 16/453 (3%)
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
I G+++ + K + A ++F+E++VRD SW A+L G+AQ G E +RL+ M
Sbjct: 78 IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS 137
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G+ + + A + L + +H G ++ V N IS Y +C ++A
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197
Query: 196 ELVFCGIEERLRTVVSWNSMVAG---CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLS 252
+ VFC + V++N++++G C +GD+ +L + M +G D T+ SLL+
Sbjct: 198 DRVFCDM--LYCDSVTFNTLISGHAQCGHGDR---ALGIFDEMQLSGLSPDSVTIASLLA 252
Query: 253 SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
+ L +G+ +HS+ + G LD + +L+ +Y K GDI+ A +FD DRT V
Sbjct: 253 ACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS-GDRTNVV 311
Query: 313 -WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
W M+ Y Q DL ++ +F+ M AAG P+ T M+ C +G + LG+ +
Sbjct: 312 LWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLT 371
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
G + ++ V LIDMYSK G + A+ + + EK VVSWT+MIAG + EAL
Sbjct: 372 IKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEAL 431
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
+ F ++ + P+ + + + AC + +G I Y Y+ ++ ++ +
Sbjct: 432 ETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVS---GYSADVSIWNGLV 488
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGI-WGTLL 523
L R G KEA ++ I+ GI W L+
Sbjct: 489 YLYARCGISKEAFSSFEA--IEHKEGITWNGLI 519
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 200/422 (47%), Gaps = 17/422 (4%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFY---NMRLVGIQADFVTVMGLTQAAIHAKHL 157
M R AS+N L GF E +L LF +V DF + + + +
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGS--GRRW 58
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
L+ +H+ I G+ + N I YAK ++ A VF E +R VSW ++++
Sbjct: 59 PLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVF--EELSVRDNVSWVAVLS 116
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G ++++ YR M +G + S+LS+ E GRL+H GF
Sbjct: 117 GYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFS 176
Query: 278 DVSVINTLISMYSKCGDIDSA-RVLFDGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+ V N LIS+Y +C A RV D + CD V++ +ISG+AQ G D AL +F
Sbjct: 177 ETFVGNALISLYLRCRSFRLADRVFCDMLYCDS--VTFNTLISGHAQCGHGDRALGIFDE 234
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M+ +G PD VT+ S+++ C G L GK +Y G+ + ++ +L+D+Y K G
Sbjct: 235 MQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGD 294
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
I +A ++F + VV W M+ + ++ D+F++++ +RPN+ T+ +L+
Sbjct: 295 IEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRT 354
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA---LDFVQSMPI 512
CTHTG + G I + + + ++ + D+ + G L +A LD ++ +
Sbjct: 355 CTHTGEIGLGEQIHSLTIKN---GFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDV 411
Query: 513 KS 514
S
Sbjct: 412 VS 413
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 231/681 (33%), Positives = 347/681 (50%), Gaps = 77/681 (11%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
SL RL I ST+ WN+ IR +V TL + QM++ P++ TFPF+ KAC
Sbjct: 80 SLLQRL--IPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKAC 137
Query: 65 AKLSDLIYSQMIHGHI--------------VKSPFVKCDRLDCAYKIFDEM---AVRDVA 107
++ L + +H + + + + +C LD A+++FDE+ + D+
Sbjct: 138 GEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIV 197
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNM---RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
SWN++L + Q G LR+ + M + ++ D +T++ + A L K VH
Sbjct: 198 SWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVH 257
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
F + G+ DV V N +S YAKC + A VF GI+++ VVSWN+MV G +
Sbjct: 258 GFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKK--DVVSWNAMVTGYSQIGS 315
Query: 225 FD-----------------------------------DSLNFYRHMMYNGFRLDVTTVVS 249
FD ++L+ +R M G +V T+ S
Sbjct: 316 FDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLAS 375
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDL-------DVSVINTLISMYSKCGDIDSARVLF 302
LLS AL+ G+ H++ I +L D+ V+N LI MY+KC AR +F
Sbjct: 376 LLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIF 435
Query: 303 DGI--CDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQS 358
D I D+ V+WT MI GYAQ G+ ++AL+LF + + P+ T+ + C +
Sbjct: 436 DSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARL 495
Query: 359 GALELGKWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G L LG+ YA + V+ V N LIDMYSK G I AR +F + + VVSWT++
Sbjct: 496 GELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSL 555
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD-- 475
+ G ++G EAL LF Q+ +L + +TFL VL AC+H+G +++G +I + D
Sbjct: 556 MTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQG----MIYFHDMV 611
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
KG P +HY+CM DLLGR G+L EA++ +++M ++ A +W LL A +IH NIE+G
Sbjct: 612 KGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELG 671
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
EY A L +L + Y ++N YA RW VA IR++MK ++K PG S
Sbjct: 672 EYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKS 731
Query: 596 TCTFTAEDRYHAESELTYPVL 616
T TF DR H ESE Y +L
Sbjct: 732 TTTFFVGDRSHPESEQIYNLL 752
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 328/634 (51%), Gaps = 24/634 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ + N N + LL F M +N PN F +AC+ + I G +V
Sbjct: 136 WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVV 195
Query: 82 KSPFVKCD----------------RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K+ +++ D L A+K+F++M R+ +W M+ Q G+
Sbjct: 196 KTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEA 255
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF M L G + D T+ G+ A + + L L + +HS I G+ D V I+
Sbjct: 256 IDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINM 315
Query: 186 YAKCD---DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD-SLNFYRHMMYNGFR 241
YAKC + A +F I + V SW +M+ G +D+ +L+ +R M+
Sbjct: 316 YAKCSVDGSMCAARKIFDQILDH--NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T S L + AL G V +H + GF V N+LISMY++ G ID AR
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + ++ +S+ +I YA+ + +EAL LF +E G T S++SG G +
Sbjct: 434 FDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTI 493
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ GLK N VCNALI MYS+CG+I A ++F + ++ V+SWT++I G
Sbjct: 494 GKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGF 553
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A +G +AL+LFH+++E +RPN VT++AVL AC+H G + +GW Y + G+
Sbjct: 554 AKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI-- 611
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++HY+CM D+LGR G L EA+ F+ SMP K+DA +W T L AC++H N+E+G++ A
Sbjct: 612 PRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKM 671
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ + EPH A Y+ ++N YA +WD V+NIR MK + K G S + K F
Sbjct: 672 IIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYV 731
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
D H ++ Y L L++ ++ Y +L ++
Sbjct: 732 GDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFV 765
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 235/516 (45%), Gaps = 34/516 (6%)
Query: 20 NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
N ++ + +N HK + M P+ T+ K C + ++H
Sbjct: 32 NPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEK 91
Query: 80 IVKSP--------------FVKCDRLDCAYKIFDEM-AVRDVASWNAMLVGFA--QMGFL 122
+ +S + KC + + A IF M + RD+ SW+AM+ FA MGF
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGF- 150
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNT 181
L F +M G + T+A A+ +S+ S+ F + G + +DV V
Sbjct: 151 -RALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCG 209
Query: 182 WISSYAKC-DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I + K DL A VF + E R V+W M+ ++++ + M+ +G+
Sbjct: 210 LIDMFVKGRGDLVSAFKVFEKMPE--RNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGY 267
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---GDIDS 297
D T+ ++S+ E L+ G+ +HS I +G LD V LI+MY+KC G + +
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR +FD I D SWTAMI+GY QKG D EAL LF M +P+ T S + C
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
AL +G+ +A G V N+LI MY++ G I DAR+ F L EK ++S+ T
Sbjct: 388 NLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNT 447
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
+I A N EAL+LF+++ + + + TF ++L G + KG Q +
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE-----QIHAR 502
Query: 477 GISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSM 510
I +L+ C A + R G ++ A + M
Sbjct: 503 VIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 289/517 (55%), Gaps = 3/517 (0%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD++ + WNA++ G+++ ++ L ++ NM+L + D T L +A
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
HL + + VH+ +G DADV V N I+ YAKC L A VF G+ RT+VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++V+ + ++L + HM + D +VS+L++F C + L QGR +H+ +
Sbjct: 192 AIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G +++ ++ +L +MY+KCG + +A++LFD + + W AMISGYA+ G EA+ +F
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M PD +++ S IS C Q G+LE + Y +D+V + +ALIDM++KC
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
GS+ AR +F ++ VV W+ MI G L+G EA+ L+ + + PN VTFL +L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H+G + +GW + D K NP+ HY+C+ DLLGR G L +A + ++ MP++
Sbjct: 432 MACNHSGMVREGWWFFNLMADHK---INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+WG LL ACK H ++E+GEY A LF ++P + YV+++N YA WD VA +R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
MK + K G S + G+ F D+ H E
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 19/420 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ IR N LL++ M+ + P++ TFP + KAC+ LS L + +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 79 HIVKSPF--------------VKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFL 122
+ + F KC RL A +F+ + + R + SW A++ +AQ G
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L +F +MR + ++ D+V ++ + A + L +S+H+ + +G++ + + +
Sbjct: 204 MEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAKC + A+++F ++ ++ WN+M++G ++++ + M+ R
Sbjct: 264 NTMYAKCGQVATAKILFDKMKS--PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D ++ S +S+ +L Q R ++ + + DV + + LI M++KCG ++ AR++F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D DR V W+AMI GY G EA+ L+ AME G P+ VT L ++ C SG +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
G WF N + +ID+ + G + A E+ +P + V W +++ C
Sbjct: 442 EGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 7/227 (3%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
Q + +H+ + G +I LI S GDI AR +FD + W A+I GY+
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ +AL ++ M+ A PD T ++ C L++G++ G +V
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 382 VCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V N LI +Y+KC +G AR +F LPE+ +VSWT +++ A NGE +EAL++F + +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRK 215
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
+D++P+ V ++VL A T L++G +I S+++ G+ P+L
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM---GLEIEPDL 259
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 16/248 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI W + + E + L +F M++ D++P+ + + A L DL + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+VK + + KC ++ A +FD+M ++ WNAM+ G+A+ G+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ +F+ M ++ D +++ A L +S++ + DV + + I
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+AKC ++ A LVF + R VV W++M+ G + ++++ YR M G +
Sbjct: 366 DMFAKCGSVEGARLVFDRTLD--RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 244 VTTVVSLL 251
T + LL
Sbjct: 424 DVTFLGLL 431
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S + WN+ I A + + +F +M D+ P+ ++ ACA++ L ++
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++ ++ +S F KC ++ A +FD RDV W+AM+VG+ G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ L+ M G+ + VT +GL A H+
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 203/621 (32%), Positives = 320/621 (51%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + + + L++QM+ ++P +TF + ACA S +MIH I+
Sbjct: 399 WNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + +C L A +F+ RDV SWN+M+ G AQ G E +
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ ++ D +T + + + L L K +H G+ DV++ N I+ Y
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYI 578
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C L+ A VF ++ R V+SW +M+ GC + ++ + M GFR +T
Sbjct: 579 RCGSLQDARNVFHSLQHR--DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTF 636
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L L +G+ V ++ ++ G++LD V N LIS YSK G + AR +FD +
Sbjct: 637 SSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPS 696
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW +I+GYAQ G A+ + M+ +P+ + +S+++ C ALE GK
Sbjct: 697 RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRV 756
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
L+ +V V ALI MY+KCGS G+A+E+F + EK VV+W MI A +G
Sbjct: 757 HAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLA 816
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+AL F+ + + ++P+ TF ++L AC H G + +G+ I + G+ P ++HY
Sbjct: 817 SKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVL--PTIEHY 874
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
C+ LLGR + +EA + MP DA +W TLL AC+IH NI + E+ A KL
Sbjct: 875 GCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNA 934
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ A Y+ ++N YA GRWD VA IR +M+ ++K PG+S ++ F A DR H
Sbjct: 935 RNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHP 994
Query: 608 ESELTYPVLDCLALHSREEAY 628
E+ Y L L++ E Y
Sbjct: 995 ETAEIYAELKRLSVEMEEAGY 1015
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 262/519 (50%), Gaps = 20/519 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + K LF +M+ PN +T+ I AC ++L + IH I+
Sbjct: 96 WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQII 155
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + KC L A ++F ++ RDV S+N ML +AQ +++ L
Sbjct: 156 KAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLG 215
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI D VT + L A L K +H + G+++D+ V ++
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C D+ A+ F G + R VV +N+++A ++ Y M +G L+ TT
Sbjct: 276 RCGDVDSAKQAFKGTAD--RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+S+L++ +AL G+L+HSH G DV + N LISMY++CGD+ AR LF +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R +SW A+I+GYA++ D EA+RL+ M++ G P VT L ++S C S A GK
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G+K N + NAL++MY +CGS+ +A+ +F + V+SW +MIAG A +G +
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
A LF ++ +L P+ +TF +VL C + LE G I + + G+ + L +
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH-GRITESGLQLDVNLGN- 571
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ ++ R G L++A + S+ + D W ++ C
Sbjct: 572 -ALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC 608
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 256/520 (49%), Gaps = 36/520 (6%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS---P-----------FVKCDRLDCAYK 96
E T+ + + C + L ++ IH +V++ P +VKC + A++
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F EM RDV SWN+++ +AQ GF + +LF M+ G + +T + + A
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +HS I G D V N+ +S Y KC DL A VF GI R VVS+N+M+
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP--RDVVSYNTML 201
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ L + M G D T ++LL +F P L +G+ +H + G +
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
D+ V L++M +CGD+DSA+ F G DR V + A+I+ AQ G EA ++ M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G + T LS+++ C S ALE GK ++ G +V + NALI MY++CG +
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
ARELFY +P++ ++SW +IAG A + EA+ L+ Q+ ++P RVTFL +L AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 457 THTGFLEKGWAISIIQYDD---KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
++ G I ++D GI N L + + ++ R G L EA + + +
Sbjct: 442 ANSSAYADGKMI----HEDILRSGIKSNGHL--ANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFK------LEP 547
D W +++ H + E AY LF+ LEP
Sbjct: 496 -DVISWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEP 530
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 241/475 (50%), Gaps = 19/475 (4%)
Query: 8 PRLNRIY---RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
PR +++ + +N+ + K + L LF QM I P+ +T+ + A
Sbjct: 180 PRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
S L + IH V+ V+C +D A + F A RDV +N
Sbjct: 240 TTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYN 299
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
A++ AQ G +Y MR G+ + T + + A +K L K +HS
Sbjct: 300 ALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED 359
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G +DV + N IS YA+C DL A +F + +R ++SWN+++AG + +++
Sbjct: 360 GHSSDVQIGNALISMYARCGDLPKARELFYTMPKR--DLISWNAIIAGYARREDRGEAMR 417
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
Y+ M G + T + LLS+ A G+++H + G + + N L++MY
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
+CG + A+ +F+G R +SW +MI+G+AQ G + A +LF M+ PD +T S
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++SGC ALELGK GL+ +V + NALI+MY +CGS+ DAR +F++L +
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRD 597
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
V+SWT MI GCA GE ++A++LF Q+ RP + TF ++L+ CT + L++G
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEG 652
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 229/438 (52%), Gaps = 16/438 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVK 87
+ +M+ + + N T+ I AC+ L ++IH HI + S + +
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYAR 377
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C L A ++F M RD+ SWNA++ G+A+ +RL+ M+ G++ VT + L
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHL 437
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A ++ + K +H + G+ ++ + N ++ Y +C L A+ VF G + R
Sbjct: 438 LSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-- 495
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V+SWNSM+AG ++ + ++ M D T S+LS PEAL G+ +H
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
G LDV++ N LI+MY +CG + AR +F + R +SWTAMI G A +G+
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM 615
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
+A+ LF+ M+ G P T S++ C S L+ GK Y + G + + V NALI
Sbjct: 616 KAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALI 675
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
YSK GS+ DARE+F +P + +VSW +IAG A NG A++ +Q+ E D+ PN+
Sbjct: 676 SAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKF 735
Query: 448 TFLAVLQACTHTGFLEKG 465
+F+++L AC+ LE+G
Sbjct: 736 SFVSLLNACSSFSALEEG 753
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 317/586 (54%), Gaps = 23/586 (3%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKS-----PFVKCDRL-----------DCAYKIFDEMA 102
I + C + DL IH H++K+ P V + L D A IF ++
Sbjct: 29 LILEQCKTIRDL---NEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQID 85
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
D ++N M+ GF + LF M +Q D T + + + LS +
Sbjct: 86 EPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQ 145
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ + G + V NT I YA C ++++A VF + ER V +WNSM AG T
Sbjct: 146 IHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSER--NVRTWNSMFAGYTKS 203
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+++ + + M+ R D T+VS+L++ L G ++ + G + ++I
Sbjct: 204 GNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI 263
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+L+ MY+KCG +D+AR LFD + R V+W+AMISGY+Q EAL LF M+ A
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ +T++S++S C GALE GKW + +K V + AL+D Y+KCGS+ + E+
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F +P K V+SWT +I G A NG+ +AL+ F+ ++E ++ PN VTF+ VL AC+H G +
Sbjct: 384 FGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLV 443
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
++G + + D GI P ++HY CM D+LGR G ++EA F+++MPI+ +A IW TL
Sbjct: 444 DEGRDLFVSMSRDFGI--EPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTL 501
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L +CK+H N+EIGE L LEP + Y+ ++N YA GRW+ +R MK +K
Sbjct: 502 LASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIK 561
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K PG SL ++G F AED H++SE Y ++ + + Y
Sbjct: 562 KTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGY 607
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 219/436 (50%), Gaps = 18/436 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N IR K H+ +LLF++M +N ++P+ TFP I K C++L L + IH I+
Sbjct: 92 YNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIM 151
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F C ++ A ++FDEM+ R+V +WN+M G+ + G E V++
Sbjct: 152 KCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVK 211
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ M + I+ D VT++ + A L L + ++ + G+ + ++ + + YA
Sbjct: 212 LFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYA 271
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F ++ R VV+W++M++G + + ++L+ + M + T+
Sbjct: 272 KCGQVDTARRLFDQMDR--RDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITM 329
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS+LSS AL G+ VH L V++ L+ Y+KCG ++S+ +F +
Sbjct: 330 VSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPV 389
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-W 366
+ +SWT +I G A G +AL F+ M P+ VT + ++S C +G ++ G+
Sbjct: 390 KNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL 449
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F + + G++ + ++D+ + G I +A + +P + V W T++A C ++
Sbjct: 450 FVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHK 509
Query: 426 EFVEALDLFHQLMELD 441
+ QL+ L+
Sbjct: 510 NVEIGEESLKQLIILE 525
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 133/295 (45%), Gaps = 17/295 (5%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WNS + + LF +M + DI + +T + AC +L+DL + I+
Sbjct: 190 VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINR 249
Query: 79 HIVK-----SP---------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
++ + +P + KC ++D A ++FD+M RDV +W+AM+ G++Q
Sbjct: 250 YVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCRE 309
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L LF+ M+ I + +T++ + + L K VH F + V++ +
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMD 369
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC ++ + VF + ++ V+SW ++ G + +L ++ M+ +
Sbjct: 370 FYAKCGSVESSIEVFGKMP--VKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPND 427
Query: 245 TTVVSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T + +LS+ + +GR L S +G + + ++ + + G I+ A
Sbjct: 428 VTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEA 482
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 205/632 (32%), Positives = 328/632 (51%), Gaps = 21/632 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V + +F +M++ + PN++TF + CA + + +HG +V
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVV 275
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S + KC L A ++FD M D+ +WN M+ G+ Q GF++
Sbjct: 276 SSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASC 335
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ M ++ D +T L K +H + I GV DV + + I Y
Sbjct: 336 LFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYF 395
Query: 188 KCDDLKMAELVFCGIEERLRT-VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC D++MA +F ++R +V +M++G +++L +R ++ R + T
Sbjct: 396 KCRDVEMARKIF---DQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVT 452
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S+L + AL G+ +H H + G V + ++ MY+KCG +D A F GI
Sbjct: 453 LASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS 512
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D+ V W +MI+ +Q G +EA+ LF M AG D V++ + +S C AL GK
Sbjct: 513 DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKE 572
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G + ++ +ALIDMYSKCG++ A +F + EK VSW ++IA +G
Sbjct: 573 IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGR 632
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
++L+LFH ++ ++P+ VTFLA++ AC H G +++G ++ GI ++H
Sbjct: 633 LKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM--ARMEH 690
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM DL GR G+L EA + SMP DAG+WGTLL AC++H N+E+ E + LF L+
Sbjct: 691 YACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLD 750
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P ++ YV ++N +A G+W+ V IR++MK V+K PG S +N T F A DR H
Sbjct: 751 PQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSH 810
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
+S Y +L L L R+E Y L ++P H
Sbjct: 811 PQSSQIYLLLKNLFLELRKEGYVPQL-YLPMH 841
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 233/522 (44%), Gaps = 20/522 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
WN IR + LL + +M P+ TFP++ KAC L+ + +++H I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 81 ---------VKSPFVKC-DRLDC---AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
V S +K C A +FD M +D WN ML G+ + G +N
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR + VT + ++ +H + G++ D V NT ++ YA
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYA 294
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A +F + + +V+WN M++G D++ + M+ + D T
Sbjct: 295 KCGHLFDARRLFDMMPK--TDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITF 352
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L L QG+ +H + I G LDV + + LI +Y KC D++ AR +FD
Sbjct: 353 SSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTP 412
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
V TAMISGY G + AL +F + + VT+ S++ C AL LGK
Sbjct: 413 VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKEL 472
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G + V +A++DMY+KCG + A + F + +K V W +MI C+ NG+
Sbjct: 473 HGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKP 532
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EA+DLF Q+ + + V+ A L AC + L G I ++ +L
Sbjct: 533 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG---AFRSDLFAE 589
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G L A +M K++ W +++ A H
Sbjct: 590 SALIDMYSKCGNLDLACRVFDTMEEKNEVS-WNSIIAAYGNH 630
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 221/484 (45%), Gaps = 15/484 (3%)
Query: 47 QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDV 106
Q +P+ L+ A A ++ + Y+ ++ G + +V C A IF ++ +
Sbjct: 54 QTCTDPSGLSQGRQAHAQMLVNGIGYNGIL-GTKLLGMYVLCGAFLDAKNIFYQLRLWCS 112
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
WN M+ GF MG + L ++ M G D T + +A ++L + VH
Sbjct: 113 EPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDK 172
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDK 224
+G + DV V ++ I Y++ + A +F +R+ + V WN M+ G
Sbjct: 173 IQFMGFELDVFVGSSLIKFYSENGCIHDARYLF----DRMPSKDGVLWNVMLNGYVKNGD 228
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+D++ + M + T +LS + G +H + G ++D V NT
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L++MY+KCG + AR LFD + V+W MISGY Q G +DEA LF M +A PD
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+T S + + L GK Y G+ +V + +ALID+Y KC + AR++F
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFD 408
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+V T MI+G LNG AL++F L++ +R N VT +VL AC L
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468
Query: 465 GWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
G + I++ G Y S + D+ + G+L A + K DA W ++
Sbjct: 469 GKELHGHILKNGHGGSCYVG-----SAIMDMYAKCGRLDLAHQTFIGISDK-DAVCWNSM 522
Query: 523 LCAC 526
+ +C
Sbjct: 523 ITSC 526
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 156/325 (48%), Gaps = 2/325 (0%)
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
++ + Q LS + H+ + G+ + + + Y C A+ +F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIF--YQ 106
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
RL WN M+ G T +FD +L FY M+ G D T ++ + ++ G
Sbjct: 107 LRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R+VH GF+LDV V ++LI YS+ G I AR LFD + + V W M++GY +
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKN 226
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
GD D A +F M P+ VT ++S C + G S GL+ + V
Sbjct: 227 GDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA 286
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
N L+ MY+KCG + DAR LF +P+ +V+W MI+G NG EA LFH+++ ++
Sbjct: 287 NTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMK 346
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
P+ +TF + L + L +G I
Sbjct: 347 PDSITFSSFLPLLSEGATLRQGKEI 371
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/564 (35%), Positives = 310/564 (54%), Gaps = 9/564 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ + K + A+ +FD++ D+ S+N ++ +A G + L LF MR +G+ D
Sbjct: 82 AAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGF 141
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T G+ A + H+ L++ +HS G D+ VSV N+ ++ Y+K L+ AE+VF G+
Sbjct: 142 TFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGM 199
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E +R VSWNSM+ + +L YR M++ GF +D+ T+ S+L++F C E L
Sbjct: 200 GEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSG 259
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCG-DIDSARVLFDGICDRTRVSWTAMISGYA 321
G H+ I GF+ + V + LI MY+KCG + +R +F+ IC V W MISGY+
Sbjct: 260 GLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYS 319
Query: 322 QKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN- 379
Q +L EAL F M+ AG PD + + IS C + GK F A + N
Sbjct: 320 QNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQ 379
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V NAL+ MYSKCG++ DAR+LF +P+ V+ ++IAG A +G E+L+LF Q++
Sbjct: 380 ISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLA 439
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+ P +T +++L AC HTG +E+G + D GI PE +HYSCM DLLGR GK
Sbjct: 440 ASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGI--EPEAEHYSCMIDLLGRAGK 497
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L EA + +MP + W LL AC+ + N+E+ E A +LEP +A PY+ +A+
Sbjct: 498 LSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASM 557
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
Y+ +W+ A IR +M+ ++K PG S +N + F AED H + + LD +
Sbjct: 558 YSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEM 617
Query: 620 ALHSREEAYSSHLKW--IPEHEAG 641
+ + Y ++W + + E G
Sbjct: 618 FVKMKRAGYVPDVRWAFVKDDETG 641
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 221/483 (45%), Gaps = 29/483 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA-------KLSDLIYSQ 74
+N+ I ++ + L LF +M++ + + TF + AC +L L +S
Sbjct: 108 FNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSS 167
Query: 75 MIHGHI-VKSP----FVKCDRLDCAYKIFDEMA--VRDVASWNAMLVGFAQMGFLENVLR 127
++ VK+ + K L+ A +F+ M VRD SWN+M+V + Q L
Sbjct: 168 GFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALA 227
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ +M G + D T+ + + LS H+ I G + + V + I YA
Sbjct: 228 LYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYA 287
Query: 188 KCD-DLKMAELVF---CGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRL 242
KC + + VF CG + +V WN+M++G + + ++L +R M G+
Sbjct: 288 KCGAGMSESRKVFEEICGSD-----LVVWNTMISGYSQNKELSVEALECFRQMQRAGYWP 342
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARVL 301
D + V +S+ + QG+ H+ + + +SV N L++MYSKCG++ AR L
Sbjct: 343 DDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKL 402
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + V+ ++I+GYAQ G E+L LF M AA P +T++S++S C +G +
Sbjct: 403 FQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRV 462
Query: 362 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
E G K+F+ G++ + +ID+ + G + +A L +P +W ++
Sbjct: 463 EEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLG 522
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
C G A +Q ++L+ N V ++ + + E+ I + D+GI
Sbjct: 523 ACRKYGNMELAEKAANQFLQLE-PTNAVPYIMLASMYSAARKWEEAARIRKLM-RDRGIR 580
Query: 480 YNP 482
P
Sbjct: 581 KKP 583
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
H + + +V N LI+ Y+K I A LFD I VS+ +I+ YA +GD
Sbjct: 64 HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS 123
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL LF M G + D T +I+ C + L + + A S G V V N+L+
Sbjct: 124 ALSLFGEMREMGLVMDGFTFSGVITAC--CNHVGLIRQLHSLAFSSGFDSYVSVKNSLLT 181
Query: 389 MYSKCGSIGDARELFYALPEKIV--VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
YSK G + +A +F + E++ VSW +MI + ++AL L+ ++ +
Sbjct: 182 YYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM 241
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS--YNPELDHYSCMADLLGRKGK-LKEA 503
T +VL + L G +Q+ K I +N S + D+ + G + E+
Sbjct: 242 FTLASVLTTFSCVEDLSGG-----LQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSES 296
Query: 504 LDFVQSMPIKSDAGIWGTLL 523
+ + SD +W T++
Sbjct: 297 RKVFEEI-CGSDLVVWNTMI 315
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 199/593 (33%), Positives = 311/593 (52%), Gaps = 18/593 (3%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------- 84
L +F +M+ + + P+ +T + ACA L DL +H ++ K+
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLD 287
Query: 85 -FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+VKC ++ A IF+ +V WN MLV F Q+ L LF M+ GI+ + T
Sbjct: 288 LYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFT 347
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + + + L + +HS + G ++D+ V I Y+K L+ A V ++
Sbjct: 348 YPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK 407
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
E+ VVSW SM+AG + D+L ++ M G D + S +S A+ QG
Sbjct: 408 EK--DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+H+ G+ DVS+ N L+++Y++CG I A F+ I + ++W ++SG+AQ
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G +EAL++F M+ +G ++ T +S +S ++ GK G V
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVG 585
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NALI +Y KCGS DA+ F + E+ VSW T+I C+ +G +EALDLF Q+ + ++
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIK 645
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
PN VTF+ VL AC+H G +E+G + D+ GI P DHY+C+ D+ GR G+L A
Sbjct: 646 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI--RPRPDHYACVIDIFGRAGQLDRA 703
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALG 563
F++ MPI +DA +W TLL ACK+H NIE+GE+ A L +LEPH +A YV ++N YA+
Sbjct: 704 KKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVT 763
Query: 564 GRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+W +R MM+ V+K PG+S + F DR H +E Y L
Sbjct: 764 EKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 240/522 (45%), Gaps = 20/522 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W + + + L L+RQM + + P + +C K ++IH
Sbjct: 111 WVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGY 170
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G+ V + +++C A ++F +M RD ++N ++ G AQ G E+ L
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ G+ D VT+ L A L +HS+ G+ +D + + + Y
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A ++F + VV WN M+ + S + M G R + T
Sbjct: 291 KCGDVETALVIFNSSDR--TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+L + C + G +HS + GF+ D+ V LI MYSK G ++ AR + + + +
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSWT+MI+GY Q +AL F M+ G PD + + S ISGC A+ G
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G +V + NAL+++Y++CG I +A F + K ++W +++G A +G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLH 528
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EAL +F ++ + ++ N TF++ L A + +++G I + G S+ E+
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIH-ARVIKTGHSFETEVG-- 585
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + L G+ G ++A M +++ W T++ +C H
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQH 626
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 217/431 (50%), Gaps = 8/431 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++F+E++ RD SW AML G+AQ G E L L+ M G+ + + +
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
A+ + + +H+ G G +++ V N I+ Y +C ++AE VFC + R V++N
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR--DTVTFN 213
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++++G + +L + M ++G D T+ SLL++ L +G +HS+
Sbjct: 214 TLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA 273
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALRL 332
G D + +L+ +Y KCGD+++A V+F+ DRT V W M+ + Q DL ++ L
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNS-SDRTNVVLWNLMLVAFGQINDLAKSFEL 332
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+AAG P+ T ++ C + ++LG+ + + G + ++ V LIDMYSK
Sbjct: 333 FCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
G + AR + L EK VVSWT+MIAG + +AL F ++ + + P+ + +
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
+ C + +G I Y Y+ ++ ++ + +L R G+++EA + +
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVS---GYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509
Query: 513 KSDAGIWGTLL 523
K D W L+
Sbjct: 510 K-DEITWNGLV 519
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 197/432 (45%), Gaps = 11/432 (2%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSL 159
M R AS L GF VL LF + R G L + + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ +H+ + G+ V N I Y+K + A VF E R VSW +M++G
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF--EELSARDNVSWVAMLSGY 118
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+++L YR M G + S+LSS E QGRL+H+ G +GF ++
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V N +I++Y +CG A +F + R V++ +ISG+AQ G + AL +F M+ +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD VT+ S+++ C G L+ G +Y G+ + ++ +L+D+Y KCG + A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F + VV W M+ + ++ +LF Q+ +RPN+ T+ +L+ CT T
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
++ G I + + E D Y + D+ + G L++A ++ + K D
Sbjct: 359 REIDLGEQIHSL-----SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVV 412
Query: 518 IWGTLLCACKIH 529
W +++ H
Sbjct: 413 SWTSMIAGYVQH 424
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 136/312 (43%), Gaps = 21/312 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+ + + + W S I V L F++M++ I P+N+ CA ++
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ IH I S + +C R+ A+ F+E+ +D +WN ++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GFAQ G E L++F M G++ + T + A+ + + K +H+ I G
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V N IS Y KC + A++ F + E R VSWN+++ C+ + ++L+ +
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIITSCSQHGRGLEALDLFDQ 638
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPE-ALVQGRLVH--SHGIHYGFDLDVSVINTLISMYSK 291
M G + + T + +L++ C LV+ L + S YG +I ++ +
Sbjct: 639 MKKEGIKPNDVTFIGVLAA--CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 292 CGDIDSARVLFD 303
G +D A+ +
Sbjct: 697 AGQLDRAKKFIE 708
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 199/592 (33%), Positives = 311/592 (52%), Gaps = 18/592 (3%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP-------------- 84
L +F +M+ + + P+ +T + ACA L DL +H ++ K+
Sbjct: 229 LEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+VKC ++ A IF+ +V WN MLV F Q+ L LF M+ GI+ + T
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + + + L + +HS + G ++D+ V I Y+K L+ A V ++E
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ VVSW SM+AG + D+L ++ M G D + S +S A+ QG
Sbjct: 409 K--DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H+ G+ DVS+ N L+++Y++CG I A F+ I + ++W ++SG+AQ G
Sbjct: 467 QIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSG 526
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+EAL++F M+ +G ++ T +S +S ++ GK G V N
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN 586
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALI +Y KCGS DA+ F + E+ VSW T+I C+ +G +EALDLF Q+ + ++P
Sbjct: 587 ALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKP 646
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
N VTF+ VL AC+H G +E+G + D+ GI P DHY+C+ D+ GR G+L A
Sbjct: 647 NDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI--RPRPDHYACVIDIFGRAGQLDRAK 704
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
F++ MPI +DA +W TLL ACK+H NIE+GE+ A L +LEPH +A YV ++N YA+
Sbjct: 705 KFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTE 764
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+W +R MM+ V+K PG+S + F DR H +E Y L
Sbjct: 765 KWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 240/522 (45%), Gaps = 20/522 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W + + + L L+RQM + + P + +C K ++IH
Sbjct: 111 WVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGY 170
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G+ V + +++C A ++F +M RD ++N ++ G AQ G E+ L
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ G+ D VT+ L A L +HS+ G+ +D + + + Y
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A ++F + VV WN M+ + S + M G R + T
Sbjct: 291 KCGDVETALVIFNSSDR--TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+L + C + G +HS + GF+ D+ V LI MYSK G ++ AR + + + +
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSWT+MI+GY Q +AL F M+ G PD + + S ISGC A+ G
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G +V + NAL+++Y++CG I +A F + K ++W +++G A +G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLH 528
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EAL +F ++ + ++ N TF++ L A + +++G I + G S+ E+
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIH-ARVIKTGHSFETEVG-- 585
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + L G+ G ++A M +++ W T++ +C H
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQH 626
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 217/431 (50%), Gaps = 8/431 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++F+E++ RD SW AML G+AQ G E L L+ M G+ + + +
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
A+ + + +H+ G G +++ V N I+ Y +C ++AE VFC + R V++N
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR--DTVTFN 213
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++++G + +L + M ++G D T+ SLL++ L +G +HS+
Sbjct: 214 TLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA 273
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALRL 332
G D + +L+ +Y KCGD+++A V+F+ DRT V W M+ + Q DL ++ L
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNS-SDRTNVVLWNLMLVAFGQINDLAKSFEL 332
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+AAG P+ T ++ C + ++LG+ + + G + ++ V LIDMYSK
Sbjct: 333 FCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
G + AR + L EK VVSWT+MIAG + +AL F ++ + + P+ + +
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
+ C + +G I Y Y+ ++ ++ + +L R G+++EA + +
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVS---GYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509
Query: 513 KSDAGIWGTLL 523
K D W L+
Sbjct: 510 K-DEITWNGLV 519
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 197/432 (45%), Gaps = 11/432 (2%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSL 159
M R AS L GF VL LF + R G L + + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ +H+ + G+ V N I Y+K + A VF E R VSW +M++G
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF--EELSARDNVSWVAMLSGY 118
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+++L YR M G + S+LSS E QGRL+H+ G +GF ++
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V N +I++Y +CG A +F + R V++ +ISG+AQ G + AL +F M+ +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD VT+ S+++ C G L+ G +Y G+ + ++ +L+D+Y KCG + A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F + VV W M+ + ++ +LF Q+ +RPN+ T+ +L+ CT T
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
++ G I + + E D Y + D+ + G L++A ++ + K D
Sbjct: 359 REIDLGEQIHSLS-----VKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVV 412
Query: 518 IWGTLLCACKIH 529
W +++ H
Sbjct: 413 SWTSMIAGYVQH 424
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 136/312 (43%), Gaps = 21/312 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+ + + + W S I V L F++M++ I P+N+ CA ++
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ IH I S + +C R+ A+ F+E+ +D +WN ++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GFAQ G E L++F M G++ + T + A+ + + K +H+ I G
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V N IS Y KC + A++ F + E R VSWN+++ C+ + ++L+ +
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIITSCSQHGRGLEALDLFDQ 638
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPE-ALVQGRLVH--SHGIHYGFDLDVSVINTLISMYSK 291
M G + + T + +L++ C LV+ L + S YG +I ++ +
Sbjct: 639 MKKEGIKPNDVTFIGVLAA--CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 292 CGDIDSARVLFD 303
G +D A+ +
Sbjct: 697 AGQLDRAKKFIE 708
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 329/627 (52%), Gaps = 22/627 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ QWN+ ++ + + + L F M +++ +P+N T P KAC +L ++ Y +MIH
Sbjct: 24 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 83
Query: 78 GHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
G + K ++KC R+ A ++FDE+ D+ +W++M+ GF + G
Sbjct: 84 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP 143
Query: 123 ENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ F M + + D VT++ L A + L + VH F I G D+S+ N+
Sbjct: 144 YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 203
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ YAK K A +F I E+ V+SW++++A ++L + MM +G
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAEK--DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+V TV+ +L + L QGR H I G + +V V L+ MY KC + A +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGA 360
F I + VSW A+ISG+ G ++ F M PD + ++ ++ C + G
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LE K F +Y G N + +L+++YS+CGS+G+A ++F + K V WT++I G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 421 CALNGEFVEALDLF-HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
++G+ +AL+ F H + +++PN VTFL++L AC+H G + +G I + +D ++
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P L+HY+ + DLLGR G L A++ + MP I GTLL AC+IH N E+ E VA
Sbjct: 502 --PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 559
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF+LE + A Y+ M+N Y + G W+ V +R +K+ +KK +SL I K F
Sbjct: 560 KKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRF 619
Query: 600 TAEDRYHAESELTYPVLDCLALHSREE 626
A+D H E E Y +L L LH +E+
Sbjct: 620 VADDELHPEKEPVYGLLKELDLHMKED 646
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R++ WN+++ + ++++ L + HM + + D T+ L + + G ++
Sbjct: 23 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 82
Query: 267 H---SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
H + G DL V ++LI MY KCG + A +FD + V+W++M+SG+ +
Sbjct: 83 HGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 140
Query: 324 GDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +A+ F M A ++ PD VT+++++S C + LG+ + G +++ +
Sbjct: 141 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 200
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+L++ Y+K + +A LF + EK V+SW+T+IA NG EAL +F+ +M+
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
PN T L VLQAC LE+G
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQG 283
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
AR +F + R+ W ++ +++ +E L F M E PD T+ + CG+
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 358 SGALELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ G+ + L ++ V ++LI MY KCG + +A +F L + +V+W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 417 MIAGCALNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQY 473
M++G NG +A++ F ++ M D+ P+RVT + ++ ACT G + +I+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ +L + + + + KEA++ + M + D W T++ AC +
Sbjct: 193 -----GFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQ 241
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/572 (33%), Positives = 313/572 (54%), Gaps = 14/572 (2%)
Query: 71 IYSQMIHGHIVKSPFVKCDRLDCAY---------KIFDEMAVRDVASWNAMLVGFAQMGF 121
I++Q++ +V+S F+ ++ ++ K+FDE V WNA++ G++ F
Sbjct: 90 IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ + ++ M+ G+ D T+ + +A L + K VH +G ++DV V N
Sbjct: 150 FGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNG 209
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ YAKC ++ A +VF G+++R +VSW SM++G ++L + M +
Sbjct: 210 LVALYAKCGRVEQARIVFEGLDDR--NIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D +VS+L ++ E L QG+ +H + G + + ++ +L +MY+KCG + AR
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSF 327
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + W AMISGYA+ G +EA+ LF M + D +TV S I C Q G+L
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+L KW +Y +++V V ALIDM++KCGS+ ARE+F +K VV W+ MI G
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGY 447
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
L+G +A+DLF+ + + + PN VTF+ +L AC H+G +E+GW + + K
Sbjct: 448 GLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELF---HSMKYYGIE 504
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
HY+C+ DLLGR G L EA DF+ +MPI+ +WG LL ACKI+ ++ +GEY A
Sbjct: 505 ARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQ 564
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
LF L+P + YV+++N YA WD VA +R +M+ + K G SL INGK F
Sbjct: 565 LFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRV 624
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
D+ H + + L+ L +E + H++
Sbjct: 625 GDKSHPRFKEIFEELESLERRLKEAGFIPHIE 656
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 208/435 (47%), Gaps = 17/435 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR + N + ++ +M+ + + P+ T P + KAC+ + L + +HG I
Sbjct: 137 WNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIF 196
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC R++ A +F+ + R++ SW +M+ G+ Q G LR
Sbjct: 197 RLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALR 256
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR ++ D++ ++ + +A + L KS+H + +G++ + + + + YA
Sbjct: 257 IFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYA 316
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + +A F +E + V+ WN+M++G ++++ ++ M+ R D TV
Sbjct: 317 KCGQVMVARSFFDQME--IPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITV 374
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S + + +L + + + + DV V LI M++KCG +D AR +FD D
Sbjct: 375 RSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLD 434
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W+AMI GY G +A+ LF+AM+ AG P+ VT + +++ C SG +E G
Sbjct: 435 KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWEL 494
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGE 426
+ G++ ++D+ + G + +A + +P E V W ++ C +
Sbjct: 495 FHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRH 554
Query: 427 FVEALDLFHQLMELD 441
QL LD
Sbjct: 555 VTLGEYAAEQLFSLD 569
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 16/250 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I W S I + L +F QM+Q +++P+ + + +A + DL + IH
Sbjct: 234 NIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIH 293
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G +VK + + KC ++ A FD+M + +V WNAM+ G+A+ G+
Sbjct: 294 GCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTN 353
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M I+ D +TV A L L K + + DV V I
Sbjct: 354 EAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALI 413
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+AKC + +A VF + + VV W++M+ G + D+++ + M G +
Sbjct: 414 DMFAKCGSVDLAREVFDRTLD--KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPN 471
Query: 244 VTTVVSLLSS 253
T V LL++
Sbjct: 472 DVTFVGLLTA 481
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 329/627 (52%), Gaps = 22/627 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ QWN+ ++ + + + L F M +++ +P+N T P KAC +L ++ Y +MIH
Sbjct: 5 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 64
Query: 78 GHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
G + K ++KC R+ A ++FDE+ D+ +W++M+ GF + G
Sbjct: 65 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP 124
Query: 123 ENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ F M + + D VT++ L A + L + VH F I G D+S+ N+
Sbjct: 125 YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 184
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ YAK K A +F I E+ V+SW++++A ++L + MM +G
Sbjct: 185 LLNCYAKSRAFKEAVNLFKMIAEK--DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 242
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+V TV+ +L + L QGR H I G + +V V L+ MY KC + A +
Sbjct: 243 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGA 360
F I + VSW A+ISG+ G ++ F M PD + ++ ++ C + G
Sbjct: 303 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 362
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LE K F +Y G N + +L+++YS+CGS+G+A ++F + K V WT++I G
Sbjct: 363 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 422
Query: 421 CALNGEFVEALDLF-HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
++G+ +AL+ F H + +++PN VTFL++L AC+H G + +G I + +D ++
Sbjct: 423 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 482
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P L+HY+ + DLLGR G L A++ + MP I GTLL AC+IH N E+ E VA
Sbjct: 483 --PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 540
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF+LE + A Y+ M+N Y + G W+ V +R +K+ +KK +SL I K F
Sbjct: 541 KKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRF 600
Query: 600 TAEDRYHAESELTYPVLDCLALHSREE 626
A+D H E E Y +L L LH +E+
Sbjct: 601 VADDELHPEKEPVYGLLKELDLHMKED 627
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R++ WN+++ + ++++ L + HM + + D T+ L + + G ++
Sbjct: 4 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 63
Query: 267 H---SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
H + G DL V ++LI MY KCG + A +FD + V+W++M+SG+ +
Sbjct: 64 HGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 121
Query: 324 GDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +A+ F M A ++ PD VT+++++S C + LG+ + G +++ +
Sbjct: 122 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 181
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+L++ Y+K + +A LF + EK V+SW+T+IA NG EAL +F+ +M+
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 241
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
PN T L VLQAC LE+G
Sbjct: 242 EPNVATVLCVLQACAAAHDLEQG 264
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R+ W ++ +++ +E L F M E PD T+ + CG+ + G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 365 KWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
+ + L ++ V ++LI MY KCG + +A +F L + +V+W++M++G
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 424 NGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISY 480
NG +A++ F ++ M D+ P+RVT + ++ ACT G + +I+ +
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR-----GF 175
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ +L + + + + KEA++ + M + D W T++ AC +
Sbjct: 176 SNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQ 222
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 329/629 (52%), Gaps = 18/629 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V + + LFR M+ + +PN T CA +DL+ +H V
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAV 275
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + KC L+ A+++F M D+ +WN M+ G Q G +++ LR
Sbjct: 276 KYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M+ G+Q D VT+ L A K +H + + DV + + + Y
Sbjct: 336 LFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYF 395
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++MA+ VF + VV ++M++G + ++ +R+++ G + + V
Sbjct: 396 KCRDVRMAQNVFDATKSI--DVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMV 453
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L + A+ G+ +H + + ++ V + L+ MYSKCG +D + +F +
Sbjct: 454 ASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSA 513
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V+W +MIS +AQ G+ +EAL LF M G + VT+ S++S C A+ GK
Sbjct: 514 KDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEI 573
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G ++ ++ +ALIDMY KCG++ A +F +PEK VSW ++I+ +G
Sbjct: 574 HGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLV 633
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E++DL + E + + VTFLA++ AC H G +++G + ++ I P+++H
Sbjct: 634 KESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHI--EPQVEHL 691
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SCM DL R GKL +A+ F+ MP K DAGIWG LL AC++H N+E+ E + LFKL+P
Sbjct: 692 SCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDP 751
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
H+ YV M+N A+ GRWDGV+ +R +MK +V+K PG S +N + F A D+ H
Sbjct: 752 HNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHP 811
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWIP 636
+SE Y L L + ++E + + P
Sbjct: 812 DSEEIYMSLKSLIIELKQEGNGNLIVMFP 840
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 255/525 (48%), Gaps = 24/525 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH-- 77
WN IR +L + +M + P+ T P++ K+CA L L +++H
Sbjct: 113 WNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRT 172
Query: 78 ------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
G + + LD A ++FD M RD WN M+ G+ + G + +
Sbjct: 173 TRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASA 232
Query: 126 LRLFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ LF MR G +F T+ L+ A A LS ++ +H+ + G++ +V+V NT +S
Sbjct: 233 VGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQ-LHTLAVKYGLEPEVAVANTLVS 291
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC L+ A +F G+ R +V+WN M++GC DD+L + M +G + D
Sbjct: 292 MYAKCQCLEEAWRLF-GLMPR-DDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDS 349
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ SLL + QG+ +H + + +DV +++ L+ +Y KC D+ A+ +FD
Sbjct: 350 VTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDA 409
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
V + MISGY + A+++F + A G P+ V V S + C A+ +G
Sbjct: 410 TKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIG 469
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ Y + V +AL+DMYSKCG + + +F + K V+W +MI+ A N
Sbjct: 470 QELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQN 529
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
GE EALDLF Q++ ++ N VT ++L AC + G I I KG +L
Sbjct: 530 GEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIII--KG-PIRADL 586
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ G+ G L+ AL + MP K++ W +++ A H
Sbjct: 587 FAESALIDMYGKCGNLELALRVFEHMPEKNEVS-WNSIISAYGAH 630
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/596 (34%), Positives = 312/596 (52%), Gaps = 18/596 (3%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------- 84
L +F +M+ + + P+ +T + ACA + DL + +H +++K+
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 85 -FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+VKC ++ A+ IF+ +V WN MLV + Q+ L +F M+ GI + T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + + L + +HS I G ++D+ V I Y+K L A + +E
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+R VVSW SM+AG D +++L ++ M G D + S S+ +A+ QG
Sbjct: 409 KR--DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+H+ G+ D+S+ NTL+++Y++CG + A LF I + ++W +ISG+ Q
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQS 526
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
++AL +F M AG ++ T +S IS ++ GK A G V
Sbjct: 527 RLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVA 586
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NALI +Y KCGSI DA+ +F + + VSW T+I C+ +G +EALDLF Q+ + L+
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
PN VTF+ VL AC+H G +E+G +S + NP DHY+C+ D+LGR G+L A
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEG--LSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRA 704
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALG 563
FV MPI ++A IW TLL ACK+H NIEIGE A L +LEPH +A YV ++N YA+
Sbjct: 705 RRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVT 764
Query: 564 GRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
G+W +R MMK ++K PG+S + F DR H S+ Y L L
Sbjct: 765 GKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSEL 820
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 229/524 (43%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + + L+ QM + P + AC K +MIH +
Sbjct: 112 WVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVY 171
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F + A ++F +M D ++N ++ G AQ G E L+
Sbjct: 172 KQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQ 231
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+L G++ D VTV L A L K +HS+ + G+ D + + Y
Sbjct: 232 IFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYV 291
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A +F + +R VV WN M+ S + M G + T
Sbjct: 292 KCGDIETAHDIF-NLGDRT-NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTY 349
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+L + C + G +HS I GF+ D+ V LI MYSK +D AR + + +
Sbjct: 350 PCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEK 409
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSWT+MI+GY Q +EAL F M+ G PD + + S S C A+ G
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G ++ + N L+++Y++CG +A LF + K ++W +I+G + +
Sbjct: 470 HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLY 529
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS--YNPELD 485
+AL +F ++ + + N TF++ + A + +++G Q + + + E +
Sbjct: 530 EQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQG-----KQVHGRAVKTGHTSETE 584
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + L G+ G +++A M ++++ W T++ +C H
Sbjct: 585 VANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQH 627
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 208/431 (48%), Gaps = 8/431 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++F E++ RD SW AML G+AQ G + RL+ M + + + A
Sbjct: 97 ARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK 156
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
K + + +H+ ++ V N I+ Y K+AE VFC + R V++N
Sbjct: 157 GKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDR--VTFN 214
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++++G + +L + M +G R D TV SLL++ L +G+ +HS+ +
Sbjct: 215 TLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKA 274
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALRL 332
G D +L+ +Y KCGDI++A +F+ + DRT V W M+ Y Q DL ++ +
Sbjct: 275 GMSFDYITEGSLLDLYVKCGDIETAHDIFN-LGDRTNVVLWNLMLVAYGQISDLAKSFEI 333
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+A G P+ T ++ C +G +ELG+ + + G + ++ V LIDMYSK
Sbjct: 334 FGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
+ AR++ L ++ VVSWT+MIAG + EAL F ++ + + P+ + +
Sbjct: 394 YRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
AC + +G I Y Y ++ ++ + +L R G+ +EA + +
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVS---GYAADISIWNTLVNLYARCGRSEEAFSLFREIDH 510
Query: 513 KSDAGIWGTLL 523
K D W L+
Sbjct: 511 K-DEITWNGLI 520
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 2/310 (0%)
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
L+ +H+ + G+ AD + N I YAK + A VF E R VSW +M++G
Sbjct: 61 LVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVF--KELSSRDHVSWVAMLSG 118
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++ Y M + + S+LS+ + QGR++H+ F +
Sbjct: 119 YAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSE 178
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V N LI++Y G A +F + RV++ +ISG+AQ G + AL++F M+
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+G PD VTV S+++ C G L+ GK +Y G+ + + +L+D+Y KCG I
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A ++F VV W M+ + ++ ++F Q+ + PN+ T+ +L+ CT
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTC 358
Query: 459 TGFLEKGWAI 468
TG +E G I
Sbjct: 359 TGQIELGEQI 368
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/618 (31%), Positives = 330/618 (53%), Gaps = 21/618 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I E ++ M++ I+P+++T + + + +L++ Q +H ++
Sbjct: 117 WTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVT---MLGLLSGVLELVHLQCLHACVI 173
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC R++ A +F+ M RDV SWN+++ G+AQ+G + VL+
Sbjct: 174 QYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQ 233
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M+ GI+ D T L AA L + K VH + G++ D + + I Y
Sbjct: 234 LLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYL 293
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F G+ + V+SW +M++G D D ++ +R M+ + T+
Sbjct: 294 KCGNVNSAFRIFEGMMHK--DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATI 351
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L++ + G VH + + LD+ N+L++MY+KCG ++ + +FD +
Sbjct: 352 ASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSR 411
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A++SG+AQ G L +AL LF M A + PD +TV+S++ C GAL GKW
Sbjct: 412 RDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWI 471
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
N+ L +++ AL+DMYSKCG +G A++ F +P++ +VSW+++IAG +G+
Sbjct: 472 HNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKG 531
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
AL ++ + ++PN V +L++L AC+H G +++G + D GI P L+H
Sbjct: 532 ETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGI--EPRLEHR 589
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R G+++EA F + M K + G LL AC+ N+E+G+ VA + L+P
Sbjct: 590 ACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKP 649
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+A YV++A+ YA RWDGV + T MK +KK PG S ++G TF + H
Sbjct: 650 ANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHP 709
Query: 608 ESELTYPVLDCLALHSRE 625
+ E VL L R+
Sbjct: 710 QFEEIMLVLKILGSEMRK 727
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/538 (27%), Positives = 252/538 (46%), Gaps = 30/538 (5%)
Query: 7 PPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK 66
P LN +S +N+ I LL + M D P+ TFP + KAC
Sbjct: 6 PSFLNPATKS-----YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTS 60
Query: 67 LSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAM 112
L + H ++ + K A K+FD M R+V W M
Sbjct: 61 LDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTM 120
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
+ + + G + ++ MR GIQ VT++GL + HL L H+ I G
Sbjct: 121 IGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCL---HACVIQYGF 177
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
+DV++ N+ ++ Y KC ++ A+ +F ++ R V+SWNS+V+G + L
Sbjct: 178 GSDVALANSMLNVYCKCGRVEDAQALFELMDA--RDVISWNSLVSGYAQLGNIREVLQLL 235
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M +G D T SL+S+ L G++VH H + G + D + +LI MY KC
Sbjct: 236 IRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC 295
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G+++SA +F+G+ + +SWTAMISG Q D A+ +F M + +P T+ S++
Sbjct: 296 GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVL 355
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
+ C + G+ LG Y +K ++ N+L+ MY+KCG + + +F + + +V
Sbjct: 356 AACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIV 415
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISII 471
SW +++G A NG +AL LF+++ + RP+ +T +++LQAC G L +G W + +
Sbjct: 416 SWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFV 475
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G P + + + D+ + G L A MP + D W +++ H
Sbjct: 476 TKSCLG----PCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSH 528
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ R ++ WN+ + K LLLF +M++ P+++T + +ACA +
Sbjct: 406 FDRMSRRDIVS-WNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGA 464
Query: 70 LIYSQMIHGHIVKS---P-----------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + IH + KS P + KC L A K FD M +D+ SW++++ G
Sbjct: 465 LHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAG 524
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+ G E LR++ + GIQ + V + + A H
Sbjct: 525 YGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSH 562
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/517 (35%), Positives = 288/517 (55%), Gaps = 3/517 (0%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD++ V WNA++ G+++ ++ L ++ M+L + D T L +A
Sbjct: 72 ARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGG 131
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
HL + + VH+ +G +ADV V N I+ YAKC L A VF G+ RT+VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWT 191
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++V+ + ++L + M + D +VS+L++F C + L QGR +H+ +
Sbjct: 192 AIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM 251
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G + + ++ +L +MY+KCG + +A++LFD + + W AMISGYA+ G +A+ LF
Sbjct: 252 GLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLF 311
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M PD +++ S IS C Q G+LE +W D Y +D+V + +ALIDM++KC
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKC 371
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
GS+ AR +F ++ VV W+ MI G L+G+ EA+ L+ + + PN VTFL +L
Sbjct: 372 GSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL 431
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H+G + +GW D K NP+ HY+C+ DLLGR G L +A + ++ MP++
Sbjct: 432 IACNHSGMVREGWWFFNRMADHK---INPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+WG LL ACK H ++E+G+Y A LF ++P + YV+++N YA WD VA +R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
MK + K G S + G+ F D+ H E
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYE 585
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 202/417 (48%), Gaps = 19/417 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR N LL++ +M+ + P++ TFP + KAC LS L + +H +
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVF 146
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFLENV 125
+ F KC RL CA +F+ + + R + SW A++ +AQ G
Sbjct: 147 RLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEA 206
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L +F MR + ++ D V ++ + A + L +S+H+ + +G++ + + + +
Sbjct: 207 LEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTM 266
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC + A+++F ++ ++ WN+M++G D+++ + M+ R D
Sbjct: 267 YAKCGQVATAKILFDKMKS--PNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTI 324
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
++ S +S+ +L Q R + + + DV + + LI M++KCG ++ AR +FD
Sbjct: 325 SITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRT 384
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
DR V W+AMI GY G EA+ L+ AME G P+ VT L ++ C SG + G
Sbjct: 385 LDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGW 444
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
WF N + +ID+ + G + A E+ +P + V W +++ C
Sbjct: 445 WFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 7/227 (3%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
Q R +H+ + G +I LI S GDI AR +FD + W A+I GY+
Sbjct: 36 QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ +AL ++ M+ A PD T ++ CG L++G++ G + +V
Sbjct: 96 RNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVF 155
Query: 382 VCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V N LI +Y+KC +G AR +F LPE+ +VSWT +++ A NGE VEAL++F Q+ +
Sbjct: 156 VQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK 215
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
+D++P+ V ++VL A T LE+G +I S+++ G+ P+L
Sbjct: 216 MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM---GLETEPDL 259
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 16/248 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI W + + E + L +F QM++ D++P+ + + A L DL + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
++K + + KC ++ A +FD+M ++ WNAM+ G+A+ GF +
Sbjct: 246 ASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ + LF+ M ++ D +++ A L + + + DV + + I
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALI 365
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+AKC ++ A VF + R VV W++M+ G + ++++ YR M +G +
Sbjct: 366 DMFAKCGSVECARSVFDRTLD--RDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPN 423
Query: 244 VTTVVSLL 251
T + LL
Sbjct: 424 DVTFLGLL 431
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S + WN+ I A + LF +M D+ P+ ++ ACA++ L ++
Sbjct: 284 KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ ++ +S F KC ++CA +FD RDV W+AM+VG+ G
Sbjct: 344 WMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ L+ M G+ + VT +GL A H+
Sbjct: 404 QAREAISLYRAMERDGVHPNDVTFLGLLIACNHS 437
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 206/634 (32%), Positives = 328/634 (51%), Gaps = 24/634 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ + N N + LL F M +N PN F +AC+ + I G ++
Sbjct: 136 WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVI 195
Query: 82 KSPFVKCD----------------RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K+ +++ D L A+K+F++M R+ +W M+ Q G+
Sbjct: 196 KTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEA 255
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF +M G + D T+ G+ A + + L L + +HS I G+ D V I+
Sbjct: 256 IDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINM 315
Query: 186 YAKCD---DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD-SLNFYRHMMYNGFR 241
YAKC + A +F I + V SW +M+ G +D+ +L+ +R M+
Sbjct: 316 YAKCSVDGSMCAARKIFDQILDH--NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T S L + AL G V +H + GF V N+LISMY++ G ID AR
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + ++ +S+ +I YA+ + +EAL LF +E G T S++SG G +
Sbjct: 434 FDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTI 493
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ GLK N VCNALI MYS+CG+I A ++F + ++ V+SWT++I G
Sbjct: 494 GKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGF 553
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A +G +AL+LFH+++E +RPN VT++AVL AC+H G + +GW Y + G+
Sbjct: 554 AKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI-- 611
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++HY+C+ D+LGR G L EA+ F+ SMP K+DA +W T L AC++H N+E+G++ A
Sbjct: 612 PRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKM 671
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ + EPH A Y+ ++N YA +WD V+NIR MK + K G S + K F
Sbjct: 672 IIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYV 731
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
D H ++ Y L L++ ++ Y +L ++
Sbjct: 732 GDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFV 765
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 236/516 (45%), Gaps = 34/516 (6%)
Query: 20 NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
N ++ + +N HK + M P+ T+ K C + ++H
Sbjct: 32 NPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEK 91
Query: 80 IVKSP--------------FVKCDRLDCAYKIFDEM-AVRDVASWNAMLVGFA--QMGFL 122
+ +S + KC + + A IF M + RD+ SW+AM+ FA MGF
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGF- 150
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNT 181
L F +M G + T+A A+ +S+ S+ F I G + +DV V
Sbjct: 151 -RALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCG 209
Query: 182 WISSYAKC-DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I + K DL A VF + E R V+W M+ ++++ + M+++G+
Sbjct: 210 LIDMFVKGRGDLVSAFKVFEKMPE--RNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGY 267
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---GDIDS 297
D T+ ++S+ E L+ G+ +HS I +G LD V LI+MY+KC G + +
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR +FD I D SWTAMI+GY QKG D EAL LF M +P+ T S + C
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
AL +G+ +A G V N+LI MY++ G I DAR+ F L EK ++S+ T
Sbjct: 388 NLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNT 447
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
+I A N EAL+LF+++ + + + TF ++L G + KG Q +
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE-----QIHAR 502
Query: 477 GISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSM 510
I +L+ C A + R G ++ A + M
Sbjct: 503 VIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 207/628 (32%), Positives = 321/628 (51%), Gaps = 25/628 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
WN IR +++ L+ M Q + P N TFPF+ KAC+ L L ++IH H
Sbjct: 75 WNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAH 134
Query: 81 -------------VKSPFVKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFLENV 125
+ + KC L A +F+ ++ RD+ +WNAM+ F+
Sbjct: 135 ILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQT 194
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ M+ G+ + T++ + A L K++H++ I +V + +
Sbjct: 195 IHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDM 254
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDV 244
YAKC L A +F + ++ V W++M+ G D D+L Y M+ G
Sbjct: 255 YAKCHLLFYARKIFNTVNKK--NDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTP 312
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ ++L + L +G+ +H H I G DLD +V N+LISMY+KCG +D+A D
Sbjct: 313 ATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDE 372
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + VS++A+ISG Q G ++AL +F M+++G P L T+++++ C AL+ G
Sbjct: 373 MIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG 432
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
Y G ++ +CNA+IDMYSKCG I +RE+F + + ++SW TMI G ++
Sbjct: 433 TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIH 492
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGISYNP 482
G VEAL LF +L L L+P+ VT +AVL AC+H+G + +G W S+ Q + P
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQ----NFNIKP 548
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+ HY CM DLL R G L EA F+Q MP + IWG LL AC+ H NIE+GE V+ +
Sbjct: 549 RMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKI 608
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
L P +V M+N Y+ GRWD A IR++ + + KK PG S I+G F
Sbjct: 609 QLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGG 668
Query: 603 DRYHAESELTYPVLDCLALHSREEAYSS 630
+ H +S L L + ++ Y +
Sbjct: 669 HQSHPQSASINKKLQELLVQMKKLGYRA 696
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 225/468 (48%), Gaps = 21/468 (4%)
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
SD +Q+ HI + + + A +FD++ V WN M+ +A G + +
Sbjct: 40 SDAAATQLARYHISR------NEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIY 93
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ +M +G+ T L +A + L L + +H+ +G+ D+ V + YA
Sbjct: 94 LYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYA 153
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A+ +F I + R +V+WN+M+A ++ +++ M G + +T+
Sbjct: 154 KCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTL 213
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS+L + AL QG+ +H++ I F +V + L+ MY+KC + AR +F+ +
Sbjct: 214 VSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNK 273
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKW 366
+ V W+AMI GY + +AL L+ M G P T+ +M+ C Q L+ GK
Sbjct: 274 KNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKK 333
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G+ + V N+LI MY+KCG + +A + K VS++ +I+GC NG
Sbjct: 334 LHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGY 393
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---WAISIIQ--YDDKGISYN 481
+AL +F Q+ + P T +A+L AC+H L+ G ++++ +D I N
Sbjct: 394 AEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSIC-N 452
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+D YS G+ +E D +Q+ I S W T++ IH
Sbjct: 453 AIIDMYS----KCGKITISREIFDRMQNRDIIS----WNTMIIGYGIH 492
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 317/621 (51%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS I + + L LF +MK++ ++P+ +T + ACA L + +H +++
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI 341
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ +V C + A+++F +V WN MLV F ++ L R
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFR 401
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M++ G+ + T + + L L + +H+ I G +V VC+ I YA
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L A ++ + E VVSW ++++G + F ++L ++ M+ G + D
Sbjct: 462 KHGKLDTAHVILRTLTED--DVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S +S+ +AL QGR +H+ G+ D+S+ N L+S+Y++CG I A + F+ I
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SW +ISG+AQ G ++AL++F M A T S +S ++ GK
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQI 639
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G ++ V NALI Y+KCGSI DAR F +PEK VSW MI G + +G
Sbjct: 640 HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYG 699
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EA++LF ++ ++ PN VTF+ VL AC+H G + KG + G+ P+ HY
Sbjct: 700 NEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLV--PKPAHY 757
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DL+ R G L A F++ MPI+ DA IW TLL AC +H N+E+GE+ A L +LEP
Sbjct: 758 ACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEP 817
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+A YV ++N YA+ G+WD R MM+ VKK PG+S + F DR H
Sbjct: 818 EDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHP 877
Query: 608 ESELTYPVLDCLALHSREEAY 628
++ Y L L + E Y
Sbjct: 878 LADKIYEFLAELNKKAAEIGY 898
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 249/521 (47%), Gaps = 21/521 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA------KLSDLI 71
++ W+ I + K +++ L LF M + ++ P ++F + +AC+ + ++ I
Sbjct: 75 SVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQI 134
Query: 72 YSQMI-HG----HIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
++++I HG I+ +P + K + A K+FD + +D SW AM+ GF+Q G+
Sbjct: 135 HARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYE 194
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
E + LF M GI + K + + +H+ G + VCN
Sbjct: 195 EEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNAL 254
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
++ Y++ + AE VF ++ + VS+NS+++G D +L + M + +
Sbjct: 255 VTLYSRMPNFVSAEKVFSKMQSK--DEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKP 312
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D TV SLLS+ AL +G +HS+ I G D+ V L+ +Y C DI +A +F
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF 372
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
V W M+ + + +L E+ R+F M+ G +P+ T S++ C GAL+
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALD 432
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
LG+ G + NV VC+ LIDMY+K G + A + L E VVSWT +I+G A
Sbjct: 433 LGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYA 492
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ F EAL F +++ ++ + + F + + AC L +G I Y Y+
Sbjct: 493 QHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS---GYSE 549
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+L + + L R G++KEA + + K D+ W L+
Sbjct: 550 DLSIGNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLI 589
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 228/500 (45%), Gaps = 21/500 (4%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----VKCDRL--------- 91
M+ I N T+ ++ C L+ + +HG I+K F V C++L
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 92 -DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
D K+F++M R V SW+ ++ GF + VL LF M + ++ + +A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 151 -AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ H + + +H+ I G+ + N I YAK + A VF + +
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL--CTKDS 178
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSW +M++G + +++++ + M G S+LS + G +H+
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
YG L+ V N L+++YS+ + SA +F + + VS+ ++ISG AQ+G D A
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L LF M+ PD VTV S++S C +GAL G+ +Y G+ +++V AL+D+
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y C I A E+F + VV W M+ E+ +F Q+ L PN+ T+
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
++L+ CT G L+ G I Q G +N + S + D+ + GKL A +++
Sbjct: 419 PSILRTCTSVGALDLGEQIH-TQVIKTGFQFNVYV--CSVLIDMYAKHGKLDTAHVILRT 475
Query: 510 MPIKSDAGIWGTLLCACKIH 529
+ + D W L+ H
Sbjct: 476 LT-EDDVVSWTALISGYAQH 494
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 16/256 (6%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R + W + I N + L F++M I+ +N+ F ACA + L
Sbjct: 474 RTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALN 533
Query: 72 YSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ IH G+ + S + +C R+ AY F+++ +D SWN ++ GFA
Sbjct: 534 QGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFA 593
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q G+ E+ L++F M ++A F T AA + ++ K +H+ I G D+D+
Sbjct: 594 QSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIE 653
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V N I+ YAKC ++ A FC + E + VSWN+M+ G + ++++N + M
Sbjct: 654 VSNALITFYAKCGSIEDARREFCEMPE--KNDVSWNAMITGYSQHGYGNEAVNLFEKMKQ 711
Query: 238 NGFRLDVTTVVSLLSS 253
G + T V +LS+
Sbjct: 712 VGEMPNHVTFVGVLSA 727
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 203/641 (31%), Positives = 315/641 (49%), Gaps = 18/641 (2%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL + + ++ WN I ++ + LF M+Q +EP+ TF I AC+ +
Sbjct: 100 RLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159
Query: 69 DLIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + + +H G+ + S + KC + A ++FD MA RD SW +
Sbjct: 160 ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 219
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+A+ G+ + L+ ++ M G++ +T M + A L K +H+ + +
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHS 279
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
DV V Y KC +K A VF + R V++WN+M+ G + +++ +
Sbjct: 280 DVRVSTALTKMYIKCGAVKDAREVFECLPNR--DVIAWNTMIGGLVDSGQLEEAHGMFHR 337
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ D T +++LS+ P L G+ +H+ + G DV N LI+MYSK G
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ AR +FD + R VSWTA++ GYA G + E+ F M G + +T + ++
Sbjct: 398 MKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKA 457
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C AL+ GK G+ ++ V NAL+ MY KCGS+ DA + + + VV+W
Sbjct: 458 CSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTW 517
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
T+I G A NG +EAL F + ++RPN TF+ V+ AC +E+G
Sbjct: 518 NTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRK 577
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D GI P HY+CM D+L R G L EA D + +MP K A +WG LL AC+ H N+EI
Sbjct: 578 DYGIV--PTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEI 635
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
GE A KLEP +A YV ++ YA G W VA +R +MK VKK PG+S + G
Sbjct: 636 GEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAG 695
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
+ +F A D+ H +E Y L+ L + Y +++
Sbjct: 696 EVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFV 736
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 247/497 (49%), Gaps = 20/497 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK---SP-----------FV 86
+ + + Q + ++ + + ++C K DL + +H HI++ P +V
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
C ++ A ++FD+ + + V SWN M+ G+A G + LF M+ G++ D T +
Sbjct: 91 HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ A L+ + VH + G+ + +V N IS YAKC ++ A VF + R
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR- 209
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
VSW ++ +SL Y M+ G R T +++LS+ AL +G+ +
Sbjct: 210 -DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQI 268
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H+ + DV V L MY KCG + AR +F+ + +R ++W MI G G L
Sbjct: 269 HAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQL 328
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EA +F M PD VT L+++S C + G L GK A GL +V NAL
Sbjct: 329 EEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNAL 388
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
I+MYSK GS+ DAR++F +P++ VVSWT ++ G A G+ VE+ F ++++ + N+
Sbjct: 389 INMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANK 448
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+T++ VL+AC++ L+ G I + GI +L + + + + G +++A+
Sbjct: 449 ITYMCVLKACSNPVALKWGKEIH-AEVVKAGIF--ADLAVANALMSMYFKCGSVEDAIRV 505
Query: 507 VQSMPIKSDAGIWGTLL 523
+ M + D W TL+
Sbjct: 506 SEGMSTR-DVVTWNTLI 521
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 214/648 (33%), Positives = 333/648 (51%), Gaps = 44/648 (6%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I + +N L F +M+ + + NN TFP + KACA L L+ + +H ++
Sbjct: 20 HWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYL 78
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEM--AVRDVASWNAMLVGFAQMGFLEN 124
+ + KC A ++FDEM DV SW A++ ++ G ++
Sbjct: 79 TRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDE 138
Query: 125 VLRLFYNMRLVG-------IQADFVTVMGLTQAAIHAKHLSLLK---SVHSFGIHIGVDA 174
+ F MR + D V++ L A + L+ +VH + G
Sbjct: 139 AFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGV 198
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ N+ + Y+ C D+ A VF GI R VVSWNS+++G T + + +L +
Sbjct: 199 STHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFED 258
Query: 235 MMYNG---FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLIS 287
M+ G + TV++LL S + VH + L DV V+ L+
Sbjct: 259 MVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLD 318
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL----- 342
M+++CG++ AR +FDG+ + V W+AMI+GY Q +EALRLF M G +
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378
Query: 343 -PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
P+ VT++S+I+ C + GA YA + GL + + +ALIDM +KCG I R+
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438
Query: 402 LFYALPE--KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F + E + VVSW++MI ++GE AL+LF ++ PN +T+++VL AC+H
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHA 498
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G +E+G + D G+S P HY+C+ DLLGR G L EA + + +MPIK+D +W
Sbjct: 499 GLVEQGKSCFNSMEKDYGMS--PTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALW 556
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
G+LL AC +H N ++GE V + L+ +S +V +AN Y GRWD V +R ++R+
Sbjct: 557 GSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRS 616
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEA 627
++K PGQS I + +F AEDR H ESE+ Y LD L R+ A
Sbjct: 617 GLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAA 664
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 202/593 (34%), Positives = 310/593 (52%), Gaps = 18/593 (3%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------- 84
L +F +M+ + + P+ +T + ACA + DL + +H +++K+
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 85 -FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+VKC ++ A+ IF+ +V WN MLV + Q+ L +F M+ GI + T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + + L + +HS I G ++D+ V I Y+K L A + +E
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+R VVSW SM+AG D +++L ++ M G D + S S+ +A+ QG
Sbjct: 409 KR--DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+H+ G+ D+S+ NTL+++Y++CG + A LF I + ++W +ISG+ Q
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQS 526
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+AL +F M AG ++ T +S IS ++ GK A G V
Sbjct: 527 RLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVA 586
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NALI +Y KCGSI DA+ +F + + VSW T+I C+ +G +EALDLF Q+ + L+
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
PN VTF+ VL AC+H G +E+G +S + NP DHY+C+ D+LGR G+L A
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEG--LSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRA 704
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALG 563
FV MPI ++A IW TLL ACK+H NIEIGE A L +LEPH +A YV ++N YA+
Sbjct: 705 RRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVT 764
Query: 564 GRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
G+W +R MMK ++K PG+S + F DR H S+ Y L
Sbjct: 765 GKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFL 817
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 229/524 (43%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + L+ QM + P + AC K +MIH +
Sbjct: 112 WVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVY 171
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F + A ++F +M D ++N ++ G AQ G E L+
Sbjct: 172 KQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQ 231
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+L G++ D VTV L A L K +HS+ + G+ D + + Y
Sbjct: 232 IFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYV 291
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A +F + +R VV WN M+ S + M G + T
Sbjct: 292 KCGDIETAHDIF-NLGDRT-NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTY 349
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+L + C + G +HS I GF+ D+ V LI MYSK G +D AR + + +
Sbjct: 350 PCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEK 409
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSWT+MI+GY Q +EAL F M+ G PD + + S S C A+ G
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G ++ + N L+++Y++CG +A LF + K ++W +I+G + +
Sbjct: 470 HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLY 529
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS--YNPELD 485
+AL +F ++ + + N TF++ + A + +++G Q + + + E +
Sbjct: 530 KQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQG-----KQVHGRAVKTGHTSETE 584
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + L G+ G +++A M ++++ W T++ +C H
Sbjct: 585 VANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQH 627
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 209/431 (48%), Gaps = 8/431 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++F E++ RD SW AML G+AQ G + RL+ M + + + A
Sbjct: 97 ARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK 156
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
K + + +H+ ++ V N I+ Y K+AE VFC + R V++N
Sbjct: 157 GKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDR--VTFN 214
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++++G + +L + M +G R D TV SLL++ L +G+ +HS+ +
Sbjct: 215 TLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKA 274
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALRL 332
G D +L+ +Y KCGDI++A +F+ + DRT V W M+ Y Q DL ++ +
Sbjct: 275 GMSFDYITEGSLLDLYVKCGDIETAHDIFN-LGDRTNVVLWNLMLVAYGQISDLAKSFEI 333
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+A G P+ T ++ C +G +ELG+ + + G + ++ V LIDMYSK
Sbjct: 334 FGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
G + AR++ L ++ VVSWT+MIAG + EAL F ++ + + P+ + +
Sbjct: 394 YGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
AC + +G I Y Y ++ ++ + +L R G+ +EA + +
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVS---GYAADISIWNTLVNLYARCGRSEEAFSLFREIEH 510
Query: 513 KSDAGIWGTLL 523
K D W L+
Sbjct: 511 K-DEITWNGLI 520
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 172/365 (47%), Gaps = 6/365 (1%)
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
L+ +H+ + G+ AD + N I YAK + A VF E R VSW +M++G
Sbjct: 61 LVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVF--KELSSRDHVSWVAMLSG 118
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++ Y M + + S+LS+ + QGR++H+ F +
Sbjct: 119 YAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSE 178
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V N LI++Y G A +F + RV++ +ISG+AQ G + AL++F M+
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+G PD VTV S+++ C G L+ GK +Y G+ + + +L+D+Y KCG I
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A ++F VV W M+ + ++ ++F Q+ + PN+ T+ +L+ CT
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTC 358
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
TG +E G I + + + ++ + D+ + G L +A ++ M K D
Sbjct: 359 TGQIELGEQIHSLSIKN---GFESDMYVSGVLIDMYSKYGCLDKARKILE-MLEKRDVVS 414
Query: 519 WGTLL 523
W +++
Sbjct: 415 WTSMI 419
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 181/517 (35%), Positives = 287/517 (55%), Gaps = 3/517 (0%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD++ + WNA++ G+++ ++ L ++ NM+L + D T L +A
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
HL + + VH+ +G DADV V N I+ YAKC L A VF G+ RT+VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++V+ + ++L + M + D +VS+L++F C + L QGR +H+ +
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G +++ ++ +L +MY+KCG + +A++LFD + + W AMISGYA+ G EA+ +F
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M PD +++ S IS C Q G+LE + Y +D+V + +ALIDM++KC
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
GS+ AR +F ++ VV W+ MI G L+G EA+ L+ + + PN VTFL +L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H+G + +GW D K NP+ HY+C+ DLLGR G L +A + ++ MP++
Sbjct: 432 MACNHSGMVREGWWFFNRMADHK---INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+WG LL ACK H ++E+GEY A LF ++P + YV+++N YA WD VA +R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
MK + K G S + G+ F D+ H E
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 205/420 (48%), Gaps = 19/420 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ IR N LL++ M+ + P++ TFP + KAC+ LS L + +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 79 HIVKSPF--------------VKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFL 122
+ + F KC RL A +F+ + + R + SW A++ +AQ G
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L +F MR + ++ D+V ++ + A + L +S+H+ + +G++ + + +
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAKC + A+++F ++ ++ WN+M++G ++++ + M+ R
Sbjct: 264 NTMYAKCGQVATAKILFDKMKS--PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D ++ S +S+ +L Q R ++ + + DV + + LI M++KCG ++ AR++F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D DR V W+AMI GY G EA+ L+ AME G P+ VT L ++ C SG +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
G WF N + +ID+ + G + A E+ +P + V W +++ C
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 121/227 (53%), Gaps = 7/227 (3%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
Q + +H+ + G +I LI S GDI AR +FD + W A+I GY+
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ +AL ++ M+ A PD T ++ C L++G++ G +V
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 382 VCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V N LI +Y+KC +G AR +F LPE+ +VSWT +++ A NGE +EAL++F Q+ +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
+D++P+ V ++VL A T L++G +I S+++ G+ P+L
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM---GLEIEPDL 259
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 16/248 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI W + + E + L +F QM++ D++P+ + + A L DL + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+VK + + KC ++ A +FD+M ++ WNAM+ G+A+ G+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ +F+ M ++ D +++ A L +S++ + DV + + I
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+AKC ++ A LVF + R VV W++M+ G + ++++ YR M G +
Sbjct: 366 DMFAKCGSVEGARLVFDRTLD--RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 244 VTTVVSLL 251
T + LL
Sbjct: 424 DVTFLGLL 431
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S + WN+ I A + + +F +M D+ P+ ++ ACA++ L ++
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++ ++ +S F KC ++ A +FD RDV W+AM+VG+ G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ L+ M G+ + VT +GL A H+
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 331/648 (51%), Gaps = 25/648 (3%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L RL + ++ WN IR + L+ M + PN T+PF+ KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 66 KLSDLIYSQMIHGHI--------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
L + IH H + + KC L A ++F M+ RDV +WNA
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ G + G ++ ++L M+ GI + T++G+ AK L K++H + +
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
D V V + YAKC L A +F + +R VSW++M+ G D ++L
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG--VRNEVSWSAMIGGYVXSDCMKEALEL 298
Query: 232 YRHMMYNGFRLDVTTVV--SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M+ +D T V S+L + L +GR +H + I G LD+ + NTL+SMY
Sbjct: 299 FDQMILKD-AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMY 357
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+KCG ID A FD + + VS++A++SG Q G+ AL +F M+ +G PDL T+L
Sbjct: 358 AKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTML 417
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
++ C AL+ G Y G + ++CNALIDMYSKCG I ARE+F +
Sbjct: 418 GVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH 477
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WA 467
+VSW MI G ++G +EAL LFH L+ L L+P+ +TF+ +L +C+H+G + +G W
Sbjct: 478 DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWF 537
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
++ + S P ++H CM D+LGR G + EA F+++MP + D IW LL AC+
Sbjct: 538 DAM----SRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593
Query: 528 IHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQ 587
IH NIE+GE V+ + L P S +V ++N Y+ GRWD A+IR K +KK PG
Sbjct: 594 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 653
Query: 588 SLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
S ING F D+ H + L+ L + + Y + ++
Sbjct: 654 SWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFV 701
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 232/487 (47%), Gaps = 29/487 (5%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
+AC + L ++ IH H +K+ ++ C+++ A ++FDE+ V
Sbjct: 16 EACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVI 75
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
WN ++ +A G + + L+++M +G++ + T + +A + +HS
Sbjct: 76 LWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHA 135
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
G+++DV VC + YAKC L A+ +F + R VV+WN+M+AGC+ DD
Sbjct: 136 KMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH--RDVVAWNAMIAGCSLYGLCDD 193
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
++ M G + +T+V +L + +AL G+ +H + + FD V V L+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLV 346
MY+KC + AR +FD + R VSW+AMI GY + EAL LF M + P V
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T+ S++ C + L G+ Y G ++++ N L+ MY+KCG I DA F +
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM 373
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
K VS++ +++GC NG AL +F + + P+ T L VL AC+H L+ G+
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433
Query: 467 A----ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
+ + + + N +D YS + GK+ A + M + D W +
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYS-------KCGKISFAREVFNRMD-RHDIVSWNAM 485
Query: 523 LCACKIH 529
+ IH
Sbjct: 486 IIGYGIH 492
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 163/320 (50%), Gaps = 3/320 (0%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L +A I +K L+ K +H + +AD SV + Y C+ + +A +F I
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP- 72
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+V+ WN ++ + FD +++ Y M++ G R + T +L + A+ G +
Sbjct: 73 -SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
HSH +G + DV V L+ Y+KCG + A+ LF + R V+W AMI+G + G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
D+A++L M+ G P+ T++ ++ G++ AL GK Y + V+V L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPN 445
+DMY+KC + AR++F + + VSW+ MI G + EAL+LF Q++ D + P
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPT 311
Query: 446 RVTFLAVLQACTHTGFLEKG 465
VT +VL+AC L +G
Sbjct: 312 PVTLGSVLRACAKLTDLSRG 331
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL + + ++L + + +H H + + D SV++ L +Y C + AR LFD I + +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
+ W +I YA G D A+ L+ +M G P+ T ++ C A+E G +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+A GL+ +V VC AL+D Y+KCG + +A+ LF ++ + VV+W MIAGC+L G +
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A+ L Q+ E + PN T + VL L G A+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKAL 232
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
L ++ C QS +L K + + V + L +Y C + AR LF +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
V+ W +I A NG F A+DL+H ++ L +RPN+ T+ VL+AC+ +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG--- 128
Query: 469 SIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
++ + E D + C A D + G L EA SM + D W ++ C
Sbjct: 129 --VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Query: 527 KIH 529
++
Sbjct: 186 SLY 188
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 325/603 (53%), Gaps = 21/603 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I E ++ M++ I+P+++T + + + +L++ Q +H ++
Sbjct: 117 WTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVT---MLGLLSGVLELVHLQCLHACVI 173
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC R++ A +F+ M RDV SWN+++ G+AQ+G + VL+
Sbjct: 174 QYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQ 233
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M+ GI+ D T L AA L + K VH + G++ D + + I Y
Sbjct: 234 LLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYL 293
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F G+ + V+SW +M++G D D ++ +R M+ + T+
Sbjct: 294 KCGNVNSAFRIFEGMMHK--DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATI 351
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L++ + G VH + + LD+ N+L++MY+KCG ++ + +FD +
Sbjct: 352 ASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSR 411
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A++SG+AQ G L +AL LF M A + PD +TV+S++ C GAL GKW
Sbjct: 412 RDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWI 471
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
N+ L +++ AL+DMYSKCG +G A++ F +P++ +VSW+++IAG +G+
Sbjct: 472 HNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKG 531
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
AL ++ + ++PN V +L++L AC+H G +++G + D GI P L+H
Sbjct: 532 ETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGI--EPRLEHR 589
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R G+++EA F + M K + G LL AC+ N+E+G+ VA + L+P
Sbjct: 590 ACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKP 649
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+A YV++A+ YA RWDGV + T MK +KK PG S ++G TF + H
Sbjct: 650 ANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHP 709
Query: 608 ESE 610
+ E
Sbjct: 710 QFE 712
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 243/506 (48%), Gaps = 25/506 (4%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV------------ 86
LL + M D P+ TFP + KAC L + H ++ +
Sbjct: 33 LLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINF 92
Query: 87 --KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
K A K+FD M R+V W M+ + + G + ++ MR GIQ VT+
Sbjct: 93 YSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTM 152
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+GL + HL L H+ I G +DV++ N+ ++ Y KC ++ A+ +F ++
Sbjct: 153 LGLLSGVLELVHLQCL---HACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDA 209
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R V+SWNS+V+G + L M +G D T SL+S+ L G+
Sbjct: 210 --RDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGK 267
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+VH H + G + D + +LI MY KCG+++SA +F+G+ + +SWTAMISG Q
Sbjct: 268 MVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQND 327
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
D A+ +F M + +P T+ S+++ C + G+ LG Y +K ++ N
Sbjct: 328 CADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQN 387
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+L+ MY+KCG + + +F + + +VSW +++G A NG +AL LF+++ + RP
Sbjct: 388 SLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRP 447
Query: 445 NRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
+ +T +++LQAC G L +G W + + G P + + + D+ + G L A
Sbjct: 448 DSITVVSLLQACASIGALHQGKWIHNFVTKSCLG----PCILIDTALVDMYSKCGDLGSA 503
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIH 529
MP + D W +++ H
Sbjct: 504 QKCFDRMP-QQDLVSWSSIIAGYGSH 528
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 5/361 (1%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
S+NA++ + G +VL + +M D T L +A S S H
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
I G +D + + I+ Y+K + A VF +++ R VV W +M+ T + D
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDD--RNVVPWTTMIGCYTRAGEHDV 132
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+ + Y M G + T++ LLS + LV + +H+ I YGF DV++ N++++
Sbjct: 133 AFSMYNIMRRQGIQPSSVTMLGLLSGVL---ELVHLQCLHACVIQYGFGSDVALANSMLN 189
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
+Y KCG ++ A+ LF+ + R +SW +++SGYAQ G++ E L+L M+ G PD T
Sbjct: 190 VYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQT 249
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
S++S L +GK + GL+ + + +LI MY KCG++ A +F +
Sbjct: 250 FGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
K V+SWT MI+G N A+ +F ++++ + P+ T +VL AC G G +
Sbjct: 310 HKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTS 369
Query: 468 I 468
+
Sbjct: 370 V 370
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ R ++ WN+ + K LLLF +M++ P+++T + +ACA +
Sbjct: 406 FDRMSRRDIVS-WNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGA 464
Query: 70 LIYSQMIHGHIVKS---P-----------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + IH + KS P + KC L A K FD M +D+ SW++++ G
Sbjct: 465 LHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAG 524
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+ G E LR++ + GIQ + V + + A H
Sbjct: 525 YGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSH 562
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 342/675 (50%), Gaps = 74/675 (10%)
Query: 10 LNRIYRSS-TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
L R++ SS T+ WN IR +V+ L L+R+M++ P++ TFPF+ KAC ++
Sbjct: 100 LRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIP 159
Query: 69 DLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVR---DVASWNA 111
+H + S F +C + A ++FDEM R D+ SWN+
Sbjct: 160 SFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNS 219
Query: 112 MLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ + Q G +++F M +GI+ D V+++ + A S K VH + +
Sbjct: 220 IVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS 279
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT--VVSWNSMVAGCTYGDKFDDS 228
G+ DV V N + YAKC ++ A VF ER++ VVSWN+MV G + +FDD+
Sbjct: 280 GLFEDVFVGNAVVDMYAKCGMMEEANKVF----ERMKVKDVVSWNAMVTGYSQIGRFDDA 335
Query: 229 L-----------------------------------NFYRHMMYNGFRLDVTTVVSLLSS 253
L + +R M+ G +V T+VSLLS
Sbjct: 336 LGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSG 395
Query: 254 FVCPEALVQGRLVHSHGIHYGFDLD-------VSVINTLISMYSKCGDIDSARVLFDGIC 306
L+ G+ H H I + +LD + VIN LI MYSKC +AR +FD I
Sbjct: 396 CASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIP 455
Query: 307 --DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALE 362
DR+ V+WT +I G AQ G+ +EAL LF M +P+ T+ + C + GAL
Sbjct: 456 PKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALR 515
Query: 363 LGKWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ Y + ++ V N LIDMYSK G + AR +F + ++ VSWT+++ G
Sbjct: 516 FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGY 575
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
++G EAL +F+++ ++ L P+ VTF+ VL AC+H+G +++G I+ +K
Sbjct: 576 GMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQG--INYFNGMNKDFGVV 633
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +HY+CM DLL R G+L EA++ ++ MP+K +W LL AC+++ N+E+GEY A
Sbjct: 634 PGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQ 693
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +LE + Y ++N YA W VA IR +MK +KK PG S T TF A
Sbjct: 694 LLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFA 753
Query: 602 EDRYHAESELTYPVL 616
D H S+ Y +L
Sbjct: 754 GDWSHPMSQQIYDLL 768
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 4/283 (1%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
IS Y + A V + TV WN ++ + +D L YR M G+R
Sbjct: 84 ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRP 143
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D T +L + + G VH+ GF+ +V V N L+SMY +CG ++AR +F
Sbjct: 144 DHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVF 203
Query: 303 DGICDR---TRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQS 358
D + +R VSW ++++ Y Q GD A+++F M E G PD V++++++ C
Sbjct: 204 DEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV 263
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GA GK YA GL ++V V NA++DMY+KCG + +A ++F + K VVSW M+
Sbjct: 264 GAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 323
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
G + G F +AL LF ++ E + N VT+ AV+ G
Sbjct: 324 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGL 366
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 203/624 (32%), Positives = 334/624 (53%), Gaps = 22/624 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQN-DIEPNNLTFPFIAKACAKLSDLIYSQMIHGH- 79
+N +R + ++ L+ +++N ++ P+N T+ F AC+ L+ ++H H
Sbjct: 78 FNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LLHAHS 134
Query: 80 ---------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V S V K R+ A K+FD M RD WN M+ G + ++ +
Sbjct: 135 IIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSI 194
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+LF M G++ D TV + AA + L + + + IG V IS Y
Sbjct: 195 QLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLY 254
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC D+ A L+F I ++++N+M++G T + S+ +R ++++G R+ +T
Sbjct: 255 SKCGDVNTARLLFRRINRP--DLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSST 312
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+V L+ L +H + G L+ +V ++Y+K +ID AR LFD
Sbjct: 313 IVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP 372
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++T V+W AMISGY Q G + A+ LF M P+ VT+ +++S C Q G+L GKW
Sbjct: 373 EKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKW 432
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ S L+ N+ V AL+DMY+KCG+I +A +LF ++ EK V+W TMI G L+G
Sbjct: 433 VHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGY 492
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EAL L+++++ L P+ VTFL+VL AC+H G + +G I + I P ++H
Sbjct: 493 GHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIE--PLIEH 550
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM D+LGR G+L++AL+F++ MP++ +WGTLL AC IH + +I + LF+L+
Sbjct: 551 YACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELD 610
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P S YV ++N Y++ + A+IR ++K+ ++ K PG +L +NG F + DR H
Sbjct: 611 PGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSH 670
Query: 607 AESELTYPVLDCLALHSREEAYSS 630
+ + Y L+ L RE Y +
Sbjct: 671 SHATDIYAKLEKLTGKMREMGYQA 694
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN+ I + LF++M + + PN +T I ACA+L L + + +H
Sbjct: 375 TVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH 434
Query: 78 GHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H++KS + KC + A+++FD M+ ++ +WN M+ G+ G+
Sbjct: 435 -HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYG 493
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+L+ M +G VT + + A HA
Sbjct: 494 HEALKLYNEMLHLGYNPSAVTFLSVLYACSHA 525
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 331/648 (51%), Gaps = 25/648 (3%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L RL + ++ WN IR + L+ M + PN T+PF+ KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 66 KLSDLIYSQMIHGHI--------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
L + IH H + + KC L A ++F M+ RDV +WNA
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ G + G ++ ++L M+ GI + T++G+ AK L K++H + +
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
D V V + YAKC L A +F + +R VSW++M+ G D ++L
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG--VRNEVSWSAMIGGYVASDCMKEALEL 298
Query: 232 YRHMMYNGFRLDVTTVV--SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M+ +D T V S+L + L +GR +H + I G LD+ + NTL+SMY
Sbjct: 299 FDQMILKD-AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMY 357
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+KCG ID A FD + + VS++A++SG Q G+ AL +F M+ +G PDL T+L
Sbjct: 358 AKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTML 417
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
++ C AL+ G Y G + ++CNALIDMYSKCG I ARE+F +
Sbjct: 418 GVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH 477
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WA 467
+VSW MI G ++G +EAL LFH L+ L L+P+ +TF+ +L +C+H+G + +G W
Sbjct: 478 DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWF 537
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
++ + S P ++H CM D+LGR G + EA F+++MP + D IW LL AC+
Sbjct: 538 DAM----SRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593
Query: 528 IHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQ 587
IH NIE+GE V+ + L P S +V ++N Y+ GRWD A+IR K +KK PG
Sbjct: 594 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 653
Query: 588 SLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
S ING F D+ H + L+ L + + Y + ++
Sbjct: 654 SWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFV 701
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 232/487 (47%), Gaps = 29/487 (5%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
+AC + L ++ IH H +K+ ++ C+++ A ++FDE+ V
Sbjct: 16 EACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVI 75
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
WN ++ +A G + + L+++M +G++ + T + +A + +HS
Sbjct: 76 LWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHA 135
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
G+++DV VC + YAKC L A+ +F + R VV+WN+M+AGC+ DD
Sbjct: 136 KMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH--RDVVAWNAMIAGCSLYGLCDD 193
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
++ M G + +T+V +L + +AL G+ +H + + FD V V L+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLV 346
MY+KC + AR +FD + R VSW+AMI GY + EAL LF M + P V
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPV 313
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T+ S++ C + L G+ Y G ++++ N L+ MY+KCG I DA F +
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEM 373
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
K VS++ +++GC NG AL +F + + P+ T L VL AC+H L+ G+
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433
Query: 467 A----ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
+ + + + N +D YS + GK+ A + M + D W +
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYS-------KCGKISFAREVFNRMD-RHDIVSWNAM 485
Query: 523 LCACKIH 529
+ IH
Sbjct: 486 IIGYGIH 492
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 163/320 (50%), Gaps = 3/320 (0%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L +A I +K L+ K +H + +AD SV + Y C+ + +A +F I
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP- 72
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+V+ WN ++ + FD +++ Y M++ G R + T +L + A+ G +
Sbjct: 73 -SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
HSH +G + DV V L+ Y+KCG + A+ LF + R V+W AMI+G + G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
D+A++L M+ G P+ T++ ++ G++ AL GK Y + V+V L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPN 445
+DMY+KC + AR++F + + VSW+ MI G + EAL+LF Q++ D + P
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPT 311
Query: 446 RVTFLAVLQACTHTGFLEKG 465
VT +VL+AC L +G
Sbjct: 312 PVTLGSVLRACAKLTDLSRG 331
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL + + ++L + + +H H + + D SV++ L +Y C + AR LFD I + +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
+ W +I YA G D A+ L+ +M G P+ T ++ C A+E G +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+A GL+ +V VC AL+D Y+KCG + +A+ LF ++ + VV+W MIAGC+L G +
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A+ L Q+ E + PN T + VL L G A+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKAL 232
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
L ++ C QS +L K + + V + L +Y C + AR LF +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
V+ W +I A NG F A+DL+H ++ L +RPN+ T+ VL+AC+ +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG--- 128
Query: 469 SIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
++ + E D + C A D + G L EA SM + D W ++ C
Sbjct: 129 --VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Query: 527 KIH 529
++
Sbjct: 186 SLY 188
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 335/629 (53%), Gaps = 28/629 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I+ WN + + L LF ++ ++P++ T+P + KAC L + +MIH
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIH 129
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+VK+ + KC+ + A +F+EM +DVA WN ++ + Q G +
Sbjct: 130 TCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F MR G + + VT+ + L+ +H I+ G D + + +
Sbjct: 190 EALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALV 249
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD--SLNFYRHMMYNGFR 241
Y KC L+MA VF + ++ TVV+WNSM++G YG K D + ++ M G +
Sbjct: 250 DMYGKCGHLEMAIEVFEQMPKK--TVVAWNSMISG--YGLKGDSISCIQLFKRMYNEGVK 305
Query: 242 LDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+TT+ SL+ VC + L++G+ VH + I DV + ++L+ +Y KCG ++ A
Sbjct: 306 PTLTTLSSLI--MVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAE 363
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F I VSW MISGY +G L EAL LF M + PD +T S+++ C Q
Sbjct: 364 NIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLA 423
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
ALE G+ N L +N +V AL+DMY+KCG++ +A +F LP++ +VSWT+MI
Sbjct: 424 ALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+G+ AL+LF ++++ +++P+RVTFLA+L AC H G +++G + GI
Sbjct: 484 AYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGII 543
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHLNIEIGEYV 538
P ++HYSC+ DLLGR G+L EA + +Q P I+ D + TL AC++H NI++G +
Sbjct: 544 --PRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEI 601
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +P ++ Y+ ++N YA +WD V +R+ MK +KK PG S IN K
Sbjct: 602 ARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILP 661
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEA 627
F ED H EL + L L+ H +E+
Sbjct: 662 FFVEDNSHLHLELVFKCLSYLSDHMEDES 690
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D ++ LL + + ++L QG+L+H + G D+ + LI++Y C D A+ +
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60
Query: 302 FDGICDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSG 359
FD + + +S W +++GY + EAL LF + L PD T S++ CG
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
LGK GL +++V ++L+ MY+KC + A LF +PEK V W T+I+
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+G F EAL+ F + PN VT + +C L +G I ++ I+
Sbjct: 181 CYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIH-----EELIN 235
Query: 480 YNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
LD + S + D+ G+ G L+ A++ + MP K+ W +++
Sbjct: 236 SGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVA-WNSMI 280
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 16/250 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS I K ++ + LF++M ++P T + C++ + L+ + +H
Sbjct: 272 TVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVH 331
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+ +++ + KC +++ A IF + V SWN M+ G+ G L
Sbjct: 332 GYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLF 391
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L LF MR ++ D +T + A L + +H+ I +D + V +
Sbjct: 392 EALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALL 451
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + A VF + + R +VSW SM+ + +L + M+ + + D
Sbjct: 452 DMYAKCGAVDEAFSVFKCLPK--RDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPD 509
Query: 244 VTTVVSLLSS 253
T +++LS+
Sbjct: 510 RVTFLAILSA 519
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L + ++ S + WN I V + + + L LF +M+++ +EP+ +TF + AC+
Sbjct: 361 LAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACS 420
Query: 66 KLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
+L+ L + IH I++ + KC +D A+ +F + RD+ SW +
Sbjct: 421 QLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTS 480
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
M+ + G L LF M ++ D VT + + A HA
Sbjct: 481 MITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHA 523
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/626 (31%), Positives = 328/626 (52%), Gaps = 22/626 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ QWN+ ++ + + F QM +++ +P+N T P KAC +L ++ Y +MIH
Sbjct: 5 TLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIH 64
Query: 78 GHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
G + K+ +VKC R+ A ++F+E+ D+ +W++M+ GF + G
Sbjct: 65 GFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSP 124
Query: 123 ENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ F M + D VT++ L A + L + VH F + G D+S+ N+
Sbjct: 125 YQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNS 184
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ YAK K A +F + E+ V+SW++++A ++L + M+ +G
Sbjct: 185 LLNCYAKSRAFKEAVNLFKMMAEK--DVISWSTVIACYVQNGAAAEALRVFNEMIDDGTE 242
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+V TV+ +L + L QGR H I G + +V V L+ MY KC + A +
Sbjct: 243 PNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGA 360
F I + VSW A+ISG+ G ++ F M PD + +L ++ C + G
Sbjct: 303 FSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGF 362
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ + F +Y G N + +L+++YS+CGS+G+A ++F + K V WT++I G
Sbjct: 363 LKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITG 422
Query: 421 CALNGEFVEALDLF-HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
++G+ +AL+ F H + +++PN VTFL++L AC+H G + +G I + +D ++
Sbjct: 423 YGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLA 482
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P L+HY+ + DLLGR G+L A++ + MP I GTLL AC+IH N E+ E VA
Sbjct: 483 --PNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 540
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF+LE + A Y+ M+N Y + G W+ V +R +K+ +KK +SL I K F
Sbjct: 541 KQLFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKF 600
Query: 600 TAEDRYHAESELTYPVLDCLALHSRE 625
A+D H E E Y +L L LH +E
Sbjct: 601 VADDDLHPEKEPVYGLLKELDLHMKE 626
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 214/434 (49%), Gaps = 13/434 (2%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M R + WN +L ++ E V+ F M + D T+ +A + +
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 161 KSVHSF-GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ +H F ++ + +D+ V ++ I Y KC + A +F +E+ +V+W+SMV+G
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKP--DIVTWSSMVSGF 118
Query: 220 TYGDKFDDSLNFYRHM-MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++ F+R M + D T+++L+S+ GR VH + GF D
Sbjct: 119 EKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSND 178
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+S++N+L++ Y+K A LF + ++ +SW+ +I+ Y Q G EALR+F M
Sbjct: 179 LSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMID 238
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G P++ TVL ++ C + LE G+ A GL+ V V AL+DMY KC S +
Sbjct: 239 DGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 298
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH-QLMELDLRPNRVTFLAVLQACT 457
A +F +P+K VVSW +I+G LNG +++ F L+E + RP+ + L VL +C+
Sbjct: 299 AYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCS 358
Query: 458 HTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
GFL++ +I+Y G NP + + + +L R G L A + +K D
Sbjct: 359 ELGFLKQAECFHSYVIKY---GFDSNPFIG--ASLVELYSRCGSLGNASKVFNEIALK-D 412
Query: 516 AGIWGTLLCACKIH 529
+W +L+ IH
Sbjct: 413 TVVWTSLITGYGIH 426
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 203/646 (31%), Positives = 329/646 (50%), Gaps = 57/646 (8%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+R + WN+ I + + L+L+ +M + +++TF + AC S L
Sbjct: 70 WRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQG 126
Query: 74 QMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH + S + + + A ++F + RD SWNA+++ +Q
Sbjct: 127 REIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQS 186
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G LR+F M+ ++ + T + + + L + +H+ + G D+D+ V
Sbjct: 187 GDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVA 245
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
I+ Y KC A VF +++R +VSWN M+ F ++L Y+ + G
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKKR--DMVSWNVMIGCYVQNGDFHEALELYQKLDMEG 303
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
F+ T VS+L + +AL QGRLVHSH + G D +V+V L++MY+KCG ++ AR
Sbjct: 304 FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEAR 363
Query: 300 VLFDGICDRTRVSWT----------------------------------AMISGYAQKGD 325
+F+ + +R V+W+ AMI+ Y Q G
Sbjct: 364 KVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGC 423
Query: 326 LDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
A+++F M AAG PD VT ++++ C G L K L+ NV+V N
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTN 483
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
LI+MY++CGS+ +A LF A EK VVSWT M+A + G + EALDLF ++ ++P
Sbjct: 484 TLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKP 543
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+ VT+ ++L CTH G LE+GW + G++ P DH++ M DLLGR G+L +A
Sbjct: 544 DDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLA--PTADHFAAMVDLLGRSGRLFDAK 601
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ ++SMP + D W T L AC+IH +E+GE A +++L+P S APY+ M+N YA G
Sbjct: 602 ELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHG 661
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
W+ VA++R M+ +KK PG S ++GK F++ +YH ++
Sbjct: 662 MWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTD 707
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 263/569 (46%), Gaps = 88/569 (15%)
Query: 49 DIEPNNLTFPFIAKACAKLSDLIYSQMIH--------------GHIVKSPFVKCDRLDCA 94
D +P+N+TF + +C+ D+ + +H G+ + S + KCD L A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 95 YKIFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAI 152
+F+ M R+V SWNAM+ +AQ G L L++ M L G+ D VT + + A
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC- 120
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L+ + +H+ + G+D+ S+ N ++ YA+ + A+ +F ++ R T SW
Sbjct: 121 --SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET--SW 176
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N+++ + + +L ++ M + + + TT ++++S F PE L +GR +H+ +
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GFD D+ V LI+MY KCG AR +FD + R VSW MI Y Q GD EAL L
Sbjct: 236 NGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALEL 295
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
+ ++ G T +S++ C AL G+ ++ GL V V AL++MY+K
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAK 355
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNG---EFVEALDLFHQLMELD-------- 441
CGS+ +AR++F A+ + V+W+T+I A NG + +A +F +L D
Sbjct: 356 CGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMI 415
Query: 442 ------------------------LRPNRVTFLAVLQACTHTGFLEKGWA----ISIIQY 473
L+P+ VTF+AVL+AC G L + A IS +
Sbjct: 416 TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL 475
Query: 474 DDKGISYNPELDHY------------------------SCMADLLGRKGKLKEALDFVQS 509
+ + N ++ Y + M + G+ EALD Q
Sbjct: 476 ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQE 535
Query: 510 MP---IKSDAGIWGTLLCACKIHLNIEIG 535
M +K D + ++L C ++E G
Sbjct: 536 MDLEGVKPDDVTYTSILFVCTHGGSLEQG 564
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 329/621 (52%), Gaps = 16/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIY-------- 72
+N IR N + L+ + K +EP+N T+ F+ + L +
Sbjct: 76 YNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVA 135
Query: 73 ---SQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
S + G + + + K R+ A K+FD M RD WN M+ G + + + +F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
+M GI D TV + + L+L + + +G + V Y+KC
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
+++ A L+F I + +VS+N+M++G T ++ + S+ ++ ++ +G +++ +++V
Sbjct: 256 GEIETARLLFGQIGQP--DLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVG 313
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
L+ F L R +H G + SV L ++YS+ +I+SAR+LFD +++
Sbjct: 314 LIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKS 373
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
SW AMISGYAQ G ++A+ LF M+ P+ VTV S++S C Q GAL LGKW +
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD 433
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+ N+ V ALIDMY+KCGSI +A+ LF +PEK V+W MI+G L+G E
Sbjct: 434 LINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHE 493
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
AL+LF++++ + P VTFL+VL AC+H G + +G I D G + P +HY+C
Sbjct: 494 ALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHG--FEPLPEHYAC 551
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
M DLLGR G L +ALDF++ MP++ +WG LL AC IH + + + LF+L+P +
Sbjct: 552 MVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQN 611
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAES 609
YV ++N Y+ G + A++R ++KR ++ K PG +L + FT+ D+ H ++
Sbjct: 612 VGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQA 671
Query: 610 ELTYPVLDCLALHSREEAYSS 630
Y +L+ L RE + +
Sbjct: 672 TAIYAMLEKLTGKMREAGFQT 692
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 2 AVSSLPPRLNRIYRS---------STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP 52
A++++ RLN I + ++ WN+ I K + LF++M++ ++ P
Sbjct: 348 ALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRP 407
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIF 98
N +T I ACA+L L + +H I + F KC + A ++F
Sbjct: 408 NPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLF 467
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
M ++ +WNAM+ G+ G+ L LF M + VT + + A HA
Sbjct: 468 SMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHA 523
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 332/645 (51%), Gaps = 31/645 (4%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+R + WN IR + + L+ +M I PN TFPF+ KAC+ L +
Sbjct: 79 HRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEG 138
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA-Q 118
+ IH I + + KC LD A ++FD+M RDV +WN+M+ GF+
Sbjct: 139 REIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLH 198
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G + V RL M+ + + T++G+ A L K +H F + G DV V
Sbjct: 199 EGSYDEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVV 257
Query: 179 CNTWISSYAKCDDLKMAELVF--CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+ Y KC + A +F GI ++ V+W++MV D ++L + ++
Sbjct: 258 GTGILDVYGKCQCIDYARRIFDMMGI---VKNEVTWSAMVGAYVVCDFMREALELFCQLL 314
Query: 237 YNGFRLDVTTVVSLLSSF-VCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
+ V + V+L + VC L G +H + I GF LD+ V NTL+SMY+KCG
Sbjct: 315 MLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCG 374
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
I+ A F+ + R VS+TA+ISGY Q G+ +E LR+F M+ +G P+ T+ S++
Sbjct: 375 IINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLP 434
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C L G YA G + M+CNALIDMY+KCG I AR++F + ++ +VS
Sbjct: 435 ACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVS 494
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISII 471
W TMI ++G +EAL LF + L+P+ VTF+ ++ AC+H+G + +G W ++
Sbjct: 495 WNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMT 554
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
Q D GI P ++HY+CM DLL R G KE F++ MP++ D +WG LL AC+++ N
Sbjct: 555 Q--DFGII--PRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKN 610
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+E+GE V+ + KL P S +V ++N Y+ GRWD A +R K +K PG S
Sbjct: 611 VELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIE 670
Query: 592 INGKTCTFTAED-RYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
I+G TF R H + LD L + + Y + ++
Sbjct: 671 ISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYV 715
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 226/503 (44%), Gaps = 45/503 (8%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKS--------------PFVK-------CDRLDCAYKIF 98
+ ++C + L ++IH H++K PF K C L A +F
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 99 DEMAVR--DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
D+M R +V WN ++ +A G E + L+Y M GI + T + +A K
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
S + +H + ++++V V + YAKC L A+ VF + + R VV+WNSM+
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHK--RDVVAWNSMI 192
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G + + D + M N + +T+V +L + +L G+ +H + GF
Sbjct: 193 SGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFV 252
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFD--GICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
DV V ++ +Y KC ID AR +FD GI + V+W+AM+ Y + EAL LF
Sbjct: 253 GDVVVGTGILDVYGKCQCIDYARRIFDMMGIV-KNEVTWSAMVGAYVVCDFMREALELFC 311
Query: 335 AMEAAGE---LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+ + + VT+ ++I C L G YA G ++MV N L+ MY+
Sbjct: 312 QLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYA 371
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCG I A F + + VS+T +I+G NG E L +F ++ + P + T +
Sbjct: 372 KCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLAS 431
Query: 452 VLQACTHTGFLEKG-----WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
VL AC H L G +AI I + + N +D Y+ G+ ++ D
Sbjct: 432 VLPACAHLAGLHYGSCSHCYAI-ICGFTADTMICNALIDMYA----KCGKIDTARKVFDR 486
Query: 507 VQSMPIKSDAGIWGTLLCACKIH 529
+ I S W T++ A IH
Sbjct: 487 MHKRGIVS----WNTMIIAYGIH 505
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 11/238 (4%)
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSH---GIHYGFDLDVSVINT----LISMYSKCG 293
RL + LL S + ++L +G+L+H H +H + +++ + L+ +Y C
Sbjct: 6 RLSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACS 65
Query: 294 DIDSARVLFDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
++ AR +FD + R + V W +I YA G +EA+ L++ M G P+ T +
Sbjct: 66 ELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFV 125
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C G+ L+ NV V AL+D Y+KCG + DA+E+F + ++ V
Sbjct: 126 LKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDV 185
Query: 412 VSWTTMIAGCALN-GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
V+W +MI+G +L+ G + E L Q M+ D+ PN T + VL A L G I
Sbjct: 186 VAWNSMISGFSLHEGSYDEVARLLVQ-MQNDVSPNSSTIVGVLPAVAQVNSLRHGKEI 242
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/632 (31%), Positives = 318/632 (50%), Gaps = 19/632 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + W + + + + +LLFR+M + P+ T + K A L + +++
Sbjct: 159 SDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVV 218
Query: 77 HGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG + K F K +R A +FD M RDV SWN+M+ G G
Sbjct: 219 HGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLY 278
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ + LF M L G + D T++ + A L L + VH + + G + S+ N
Sbjct: 279 DKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVL 338
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y+ C D + +F + ++ VVSW +M+ T +D ++ M G R
Sbjct: 339 LDMYSNCSDWRSTNKIFRNMVQK--NVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRP 396
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D+ + S L +F E L G+ VH + I G + ++V N L+ MY KCG+++ A+++F
Sbjct: 397 DIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIF 456
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DG+ + +SW +I GY++ +EA LF M P+ VT+ ++ +LE
Sbjct: 457 DGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLR-PNAVTMTCILPAAASLSSLE 515
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ YA G ++ V NALIDMY KCG++ AR LF L K ++SWT M+AG
Sbjct: 516 RGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYG 575
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
++G +A+ LF Q+ + P+ +F A+L AC+H+G ++GW + I P
Sbjct: 576 MHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIE--P 633
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
L HY+CM DLL G LKEA +F+ SMPI+ D+ IW +LL C+IH N+++ E VA +
Sbjct: 634 RLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERV 693
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
F+LEP + YV +AN YA RW+ V ++ + +++ G S GK F A+
Sbjct: 694 FELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIAD 753
Query: 603 DRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
+R H + L+ +A +EE + K+
Sbjct: 754 NRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKY 785
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 217/420 (51%), Gaps = 11/420 (2%)
Query: 85 FVKCDRLDCAYKIFDEMA-VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
++KC L+ A ++FDEM V DV W A++ G+A+ G L + LF M G++ D T
Sbjct: 139 YLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYT 198
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + + + + VH +G + +V N ++ YAK + K A LVF G+
Sbjct: 199 ISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMP 258
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
R V+SWNSM++GCT +D ++ + M G LD T++S+L + L G
Sbjct: 259 HR--DVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLG 316
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R+VH + + GF S+ N L+ MYS C D S +F + + VSWTAMI+ Y +
Sbjct: 317 RVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRA 376
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G D+ LF M G PD+ + S + + L+ GK YA G++ + V
Sbjct: 377 GLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT 436
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NAL++MY KCG++ +A+ +F + K ++SW T+I G + N EA LF +++ L LR
Sbjct: 437 NALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-LQLR 495
Query: 444 PNRVTFLAVLQACTHTGFLEKG-----WAISIIQYDDKGISYNPELDHY-SCMADLLGRK 497
PN VT +L A LE+G +A+ +D ++ N +D Y C A LL R+
Sbjct: 496 PNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVA-NALIDMYVKCGALLLARR 554
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 5/221 (2%)
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALRLFFA 335
+D + L+ MY KCGD+++AR +FD + + V WTA++SGYA+ GDL E + LF
Sbjct: 127 MDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRK 186
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M G PD T+ ++ G++E G+ G V NAL+ Y+K
Sbjct: 187 MHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNR 246
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
DA +F +P + V+SW +MI+GC NG + +A++LF ++ + T L+VL A
Sbjct: 247 TKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPA 306
Query: 456 CTHTGFLEKGWAISIIQYDDKGISY----NPELDHYSCMAD 492
C L G + IS N LD YS +D
Sbjct: 307 CAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSD 347
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 222/638 (34%), Positives = 327/638 (51%), Gaps = 54/638 (8%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
RS WN I +++ + L FRQ + EPN T AC L +
Sbjct: 111 RSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGL 170
Query: 75 MIHGHIVKSPFVKC-------------DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG+I++S F+ + ++ A ++FDEM RDV SW+ M+ G+ Q G
Sbjct: 171 KMHGYIIRSGFLDIPSVQNSLLSMYADNDMERAEELFDEMCERDVISWSVMIGGYVQTGE 230
Query: 122 LENVLRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L+LF M I+ D +T++ + +A + +S+ +SVH I G+D D+ V N
Sbjct: 231 AXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGN 290
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I Y+K DD + A F E R VSWNS+++G +K ++L+ + M GF
Sbjct: 291 SIIDMYSKXDDHESAFKAFN--EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGF 348
Query: 241 RLDVTTVVSLLSS---FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
R D T+V+LL S FV P Q + +HS I +G++L+ VIN+LI YSKC I+
Sbjct: 349 RADEVTLVNLLQSCKYFVDP---FQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIEL 405
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A LFD + + VSW+AMI+G+ G DEA+ LF M A E P+ VT+LS++
Sbjct: 406 AWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSV 465
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
S L+ KW GL V V A++DMY+KCG IG +R+ F +PEK +VSW M
Sbjct: 466 SADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAM 525
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IA C +NG +AL L ++ L+PN VT L+VL AC+H G +E+G + D G
Sbjct: 526 IAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHG 585
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHLNIEIG 535
+ P L+HYSCM D+L R GKL A++ ++ MP ++ AG+WG LL AC+ N +G
Sbjct: 586 V--EPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLG 643
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
A + LEP S+A Y ++ YA G L H+ K
Sbjct: 644 AGAAXRVLXLEPQSSAGYFLASSMYAASG------------------------LVHVEDK 679
Query: 596 TCTFTAEDRYHAESELTYPVL----DCLALHSREEAYS 629
F A D H + + V+ DC+ + R E ++
Sbjct: 680 AWRFVAGDESHPRAGEIWGVVEQLHDCMKIAERNETFA 717
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 261/534 (48%), Gaps = 36/534 (6%)
Query: 19 INQWNSQIREAVNKN--EAHKTLLLFRQMKQNDIEPNNLTFPF-IAKACAKLSDLIYSQM 75
+ WN I+++ N+ ++ + + QMK+ + + T I KAC+ L + + +
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP-VRHGKS 70
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++K F +K LD A +FD M RD SWN M+ G G
Sbjct: 71 IHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 130
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLK---SVHSFGIHIGVDADVS 177
+ L F R++ + + T++ AIHA + L ++ +H + I G S
Sbjct: 131 SDXGLWWFRQARVIAFEPNVSTLV----LAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS 186
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V N+ +S YA +D++ AE +F + E R V+SW+ M+ G + +L + M
Sbjct: 187 VQNSLLSMYAD-NDMERAEELFDEMCE--RDVISWSVMIGGYVQTGEAXMALQLFLEMXS 243
Query: 238 NG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
N LD T+VS+L + + GR VH I G D D+ V N++I MYSK D +
Sbjct: 244 NAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHE 303
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
SA F+ + R VSW ++ISG + EAL LF++M AG D VT+++++ C
Sbjct: 304 SAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCK 363
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
K+ + G + N V N+LID YSKC I A +LF L K VSW+
Sbjct: 364 YFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSA 423
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDD 475
MIAG G+ EA+ LF ++ + +PN VT L++L+A + + L++ WA I
Sbjct: 424 MIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIR-- 481
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+G++ E+ + + D+ + G++ + +P K+ WG ++ AC ++
Sbjct: 482 RGLA--AEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS-WGAMIAACGMN 532
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 204/621 (32%), Positives = 320/621 (51%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS I + + K L LF++M + ++P+ +T + AC+ + L+ + H + +
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ +VKC + A++ F +V WN MLV + + L +
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFK 459
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M++ GI+ + T + + + + L + +H+ + G +V V + I YA
Sbjct: 460 IFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 519
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L A +F ++E+ VVSW +M+AG +KF ++LN ++ M G D
Sbjct: 520 KLGKLDHALKIFRRLKEK--DVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGF 577
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S +S+ +AL QG+ +H+ G+ D+SV N L+S+Y++CG + A FD I
Sbjct: 578 ASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFS 637
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SW ++ISG+AQ G +EAL LF M AG+ + T +S ++LGK
Sbjct: 638 KDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQI 697
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G V N LI +Y+KCG+I DA F+ +PEK +SW M+ G + +G
Sbjct: 698 HAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHG 757
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+AL LF + +L + PN VTF+ VL AC+H G +++G I Q + P+ +HY
Sbjct: 758 FKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEG--IKYFQSMREVHGLVPKPEHY 815
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLLGR G L A FV+ MPI+ DA + TLL AC +H NI+IGE+ A L +LEP
Sbjct: 816 ACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEP 875
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+A YV ++N YA+ G+W R MMK VKK PG+S +N F A D+ H
Sbjct: 876 KDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHP 935
Query: 608 ESELTYPVLDCLALHSREEAY 628
+ Y L L + E Y
Sbjct: 936 NVDKIYEYLRDLNELAAENGY 956
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 246/518 (47%), Gaps = 23/518 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA------KLSDLIYSQM 75
WN + V A + L LFR+M Q ++P+ T+ + + C + I+++
Sbjct: 137 WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHART 196
Query: 76 I-HGH----IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
I HG+ V +P + K L+ A K+FD + RD SW AML G +Q G E +
Sbjct: 197 ITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAV 256
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M G+ + A + + + +H + G + VCN ++ Y
Sbjct: 257 LLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLY 316
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++ + AE VF + +R VS+NS+++G + D +L ++ M + + D T
Sbjct: 317 SRLGNFIPAEQVFNAMLQR--DEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVT 374
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V SLLS+ AL+ G+ HS+ I G D+ + L+ +Y KC DI +A F
Sbjct: 375 VASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTE 434
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
V W M+ Y +L+E+ ++F M+ G P+ T S++ C A++LG+
Sbjct: 435 TENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQ 494
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G + NV V + LIDMY+K G + A ++F L EK VVSWT MIAG A + +
Sbjct: 495 IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEK 554
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS-YNPELD 485
F EAL+LF ++ + + + + F + + AC L +G I + +S Y+ +L
Sbjct: 555 FAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQI----HAQACVSGYSDDLS 610
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + L R GK+++A F D W +L+
Sbjct: 611 VGNALVSLYARCGKVRDAY-FAFDKIFSKDNISWNSLI 647
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 243/523 (46%), Gaps = 22/523 (4%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQ-MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
N+ + A + +E + F M++ + N+ T+ ++ C +HG I+
Sbjct: 36 NTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKIL 95
Query: 82 KSPF----VKCDRL----------DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F V C+RL D A +FDEM VR ++ WN +L F VL
Sbjct: 96 KMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLG 155
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M ++ D T G+ + ++ +H+ I G + + VCN I Y
Sbjct: 156 LFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLY 215
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
K L A+ VF G+++ R VSW +M++G + ++++ + M +G
Sbjct: 216 FKNGFLNSAKKVFDGLQK--RDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYI 273
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+LS+ E G +H + GF L+ V N L+++YS+ G+ A +F+ +
Sbjct: 274 FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 333
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R VS+ ++ISG +Q+G D+AL LF M PD VTV S++S C GAL +GK
Sbjct: 334 QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
F +YA G+ ++++ AL+D+Y KC I A E F + + VV W M+ L
Sbjct: 394 FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN 453
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
E+ +F Q+ + PN+ T+ ++L+ C+ ++ G I Q G +N +
Sbjct: 454 LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH-TQVLKTGFQFNVYVS- 511
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + GKL AL + + K D W ++ H
Sbjct: 512 -SVLIDMYAKLGKLDHALKIFRRLKEK-DVVSWTAMIAGYAQH 552
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 16/259 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
++ R + + W + I + + L LF++M+ I +N+ F ACA +
Sbjct: 529 KIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQ 588
Query: 69 DLIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L Q IH G+ + S + +C ++ AY FD++ +D SWN+++
Sbjct: 589 ALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLIS 648
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GFAQ G E L LF M G + + T AA + ++ L K +H+ I G D+
Sbjct: 649 GFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDS 708
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V N I+ YAKC ++ AE F + E + +SWN+M+ G + +L+ +
Sbjct: 709 ETEVSNVLITLYAKCGNIDDAERQFFEMPE--KNEISWNAMLTGYSQHGHGFKALSLFED 766
Query: 235 MMYNGFRLDVTTVVSLLSS 253
M G + T V +LS+
Sbjct: 767 MKQLGVLPNHVTFVGVLSA 785
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 319/630 (50%), Gaps = 17/630 (2%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R I WN+ +R V K + + M Q+ + P+N T+P + KAC+ L L
Sbjct: 91 RALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQ 150
Query: 72 YSQMIHGHI-------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ +H + V F KC ++ A ++F+EM RD+ASW A++ G
Sbjct: 151 LGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMW 210
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G L LF MR G+ D V V + A + + L ++ + G ++D+ V
Sbjct: 211 NGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYV 270
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N I Y KC D A VF + VVSW++++AG + + +S Y M+
Sbjct: 271 SNAVIDMYCKCGDPLEAHRVFSHM--VYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINV 328
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + S+L + E L QG+ +H+ + G DV V + LI MY+ CG I A
Sbjct: 329 GLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEA 388
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F+ D+ + W +MI GY GD + A F + A P+ +TV+S++ C Q
Sbjct: 389 ESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQM 448
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GAL GK Y GL NV V N+LIDMYSKCG + ++F + + V ++ TMI
Sbjct: 449 GALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMI 508
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+ C +G+ + L + Q+ E RPN+VTF+++L AC+H G L++GW + +D GI
Sbjct: 509 SACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGI 568
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
P ++HYSCM DL+GR G L A F+ MP+ DA ++G+LL AC++H +E+ E +
Sbjct: 569 --EPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELL 626
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A + +L+ + YV ++N YA G RW+ ++ +R+M+K ++K PG S +
Sbjct: 627 AERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYV 686
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAY 628
F A +H L+ L L + E Y
Sbjct: 687 FHATSAFHPAFAKIEETLNSLLLVMKSEDY 716
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 215/452 (47%), Gaps = 9/452 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+V L A+ F + + + +WNA+L G +G + +++M G+ D T
Sbjct: 77 YVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTY 136
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A L L + VH +H A+V V I +AKC ++ A +F + +
Sbjct: 137 PLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPD 195
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R + SW +++ G + + ++L +R M G D V S+L + EA+ G
Sbjct: 196 --RDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGM 253
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+ + GF+ D+ V N +I MY KCGD A +F + VSW+ +I+GY+Q
Sbjct: 254 ALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNC 313
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
E+ +L+ M G + + S++ G+ L+ GK N+ GL +V+V +
Sbjct: 314 LYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGS 373
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALI MY+ CGSI +A +F +K ++ W +MI G L G+F A F ++ + RP
Sbjct: 374 ALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRP 433
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-GISYNPELDHYSCMADLLGRKGKLKEA 503
N +T +++L CT G L +G I Y K G+ N + + + D+ + G L+
Sbjct: 434 NFITVVSILPICTQMGALRQGKEIH--GYVTKSGLGLNVSVG--NSLIDMYSKCGFLELG 489
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
+ M ++ + + T++ AC H E G
Sbjct: 490 EKVFKQMMVR-NVTTYNTMISACGSHGQGEKG 520
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 150/289 (51%), Gaps = 3/289 (1%)
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
S + ++ Y L+ A L F + + +++WN+++ G F +++FY M+
Sbjct: 68 SFASQLVNVYVNFGSLQHAFLTFRALPHK--PIIAWNAILRGLVAVGHFTKAIHFYHSML 125
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+G D T +L + AL GR VH +H +V V +I M++KCG ++
Sbjct: 126 QHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVE 184
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR +F+ + DR SWTA+I G G+ EAL LF M + G +PD V V S++ CG
Sbjct: 185 DARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACG 244
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ A++LG A G + ++ V NA+IDMY KCG +A +F + VVSW+T
Sbjct: 245 RLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWST 304
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+IAG + N + E+ L+ ++ + L N + +VL A L++G
Sbjct: 305 LIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQG 353
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 134/287 (46%), Gaps = 10/287 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-----DLDVSVINTLISMYSKCGDID 296
L + V+ P L + R +H+ + GF S + L+++Y G +
Sbjct: 25 LPIHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQ 84
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A + F + + ++W A++ G G +A+ + +M G PD T ++ C
Sbjct: 85 HAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACS 144
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
AL+LG+W G K NV V A+IDM++KCGS+ DAR +F +P++ + SWT
Sbjct: 145 SLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTA 203
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
+I G NGE +EAL LF ++ L P+ V ++L AC ++ G A+ +
Sbjct: 204 LICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRS- 262
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ +L + + D+ + G EA M + SD W TL+
Sbjct: 263 --GFESDLYVSNAVIDMYCKCGDPLEAHRVFSHM-VYSDVVSWSTLI 306
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+++Y GS+ A F ALP K +++W ++ G G F +A+ +H +++ + P+
Sbjct: 73 LVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPD 132
Query: 446 RVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSC-MADLLGRKGKLKEA 503
T+ VL+AC+ L+ G W + K Y C + D+ + G +++A
Sbjct: 133 NYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVY------VQCAVIDMFAKCGSVEDA 186
Query: 504 LDFVQSMPIKSDAGIWGTLLCA 525
+ MP + D W L+C
Sbjct: 187 RRMFEEMPDR-DLASWTALICG 207
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 324/646 (50%), Gaps = 57/646 (8%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+R + WN+ I + + L+L+ +M + +++TF + AC S L
Sbjct: 70 WRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQG 126
Query: 74 QMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH + S + + + A ++F + RD SWNA+++ +Q
Sbjct: 127 REIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQS 186
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G LR+F M+ ++ + T + + + L + +H+ + G D D+ V
Sbjct: 187 GDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVA 245
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
I+ Y KC A VF +++R +VSWN M+ F ++L Y+ + G
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKKR--DMVSWNVMIGCYVLNGDFHEALELYQKLDMEG 303
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG------ 293
F+ T VS+L + +AL QGRLVHSH + G D +V+V L++MY+KCG
Sbjct: 304 FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEAR 363
Query: 294 ----------------------------DIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
D AR +FD + R +SW AMI+ Y Q G
Sbjct: 364 KVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGC 423
Query: 326 LDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
A+++F M AAG PD VT ++++ C G L K L+ NV+V N
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTN 483
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
LI+MY++CGS+ +A LF A EK VVSWT M+A + G + EALDLF ++ ++P
Sbjct: 484 TLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKP 543
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+ VT+ ++L CTH G LE+GW + ++ P DH++ M DLLGR G+L +A
Sbjct: 544 DDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALA--PTADHFAAMVDLLGRSGRLFDAK 601
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ ++SMP + D W T L AC+IH +E+GE A +++L+P S APY+ M+N YA G
Sbjct: 602 ELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHG 661
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
W+ VA++R M+ +KK PG S ++GK F++ +YH ++
Sbjct: 662 MWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTD 707
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/586 (27%), Positives = 269/586 (45%), Gaps = 90/586 (15%)
Query: 49 DIEPNNLTFPFIAKACAKLSDLIYSQMIH--------------GHIVKSPFVKCDRLDCA 94
D +P+N+TF + +C+ D++ + +H G+ + S + KCD L A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 95 YKIFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAI 152
+F+ M R+V SWNAM+ +AQ G L L++ M L G+ D VT + + A
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC- 120
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L+ + +H+ + G+D+ S+ N ++ YA+ + A+ +F ++ R T SW
Sbjct: 121 --SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET--SW 176
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N+++ + + +L ++ M + + + TT ++++S F PE L +GR +H+ +
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GFD D+ V LI+MY KCG AR +FD + R VSW MI Y GD EAL L
Sbjct: 236 NGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALEL 295
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
+ ++ G T +S++ C AL G+ ++ GL V V AL++MY+K
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAK 355
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNG---EFVEALDLFHQLMELD-------- 441
CGS+ +AR++F A+ + V+W+T+I A NG + +A +F +L D
Sbjct: 356 CGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMI 415
Query: 442 ------------------------LRPNRVTFLAVLQACTHTGFLEKGWA----ISIIQY 473
L+P+ VTF+AVL+AC G L + A IS +
Sbjct: 416 TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL 475
Query: 474 DDKGISYNPELDHY------------------------SCMADLLGRKGKLKEALDFVQS 509
+ + N ++ Y + M + G+ EALD Q
Sbjct: 476 ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQE 535
Query: 510 MP---IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
M +K D + ++L C ++E G Y E H+ AP
Sbjct: 536 MDLEGVKPDDVTYTSILFVCTHGGSLEQG--WRYFTDMAELHALAP 579
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLS 68
+R+ TI+ WN+ I V A + +FR+M ++P+ +TF + +ACA L
Sbjct: 400 FDRLGSRDTIS-WNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLG 458
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + +H I +S + +C L+ A ++F + V SW AM+
Sbjct: 459 RLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVA 518
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
F+Q G L LF M L G++ D VT + H L
Sbjct: 519 AFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSL 561
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 341/675 (50%), Gaps = 74/675 (10%)
Query: 10 LNRIYRSS-TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
L R++ SS T+ WN IR +V+ L L+R+M++ P++ TFPF+ KAC ++
Sbjct: 81 LRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIP 140
Query: 69 DLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVR---DVASWNA 111
+H + S F +C + A ++FDEM R D+ SWN+
Sbjct: 141 SFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNS 200
Query: 112 MLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ + Q G +++F M +GI+ D V+++ + A S K VH + +
Sbjct: 201 IVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS 260
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT--VVSWNSMVAGCTYGDKFDDS 228
G+ DV V N + YAKC ++ A VF ER++ VVSWN+MV G + +FDD+
Sbjct: 261 GLFEDVFVGNAVVDMYAKCGMMEEANKVF----ERMKVKDVVSWNAMVTGYSQIGRFDDA 316
Query: 229 L-----------------------------------NFYRHMMYNGFRLDVTTVVSLLSS 253
L + +R M G +V T+VSLLS
Sbjct: 317 LGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSG 376
Query: 254 FVCPEALVQGRLVHSHGIHYGFDLD-------VSVINTLISMYSKCGDIDSARVLFDGIC 306
L+ G+ H H I + +LD + VIN LI MYSKC +AR +FD I
Sbjct: 377 CALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIP 436
Query: 307 --DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALE 362
DR+ V+WT +I G AQ G+ +EAL LF M +P+ T+ + C + GAL
Sbjct: 437 PKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALR 496
Query: 363 LGKWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ Y + ++ V N LIDMYSK G + AR +F + ++ VSWT+++ G
Sbjct: 497 FGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGY 556
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
++G EAL +F+++ ++ L P+ VTF+ VL AC+H+G +++G I+ +K
Sbjct: 557 GMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQG--INYFNGMNKDFGVV 614
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +HY+CM DLL R G+L EA++ ++ MP+K +W LL AC+++ N+E+GEY A
Sbjct: 615 PGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQ 674
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +LE + Y ++N YA W VA IR +MK +KK PG S T TF A
Sbjct: 675 LLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFA 734
Query: 602 EDRYHAESELTYPVL 616
D H S+ Y +L
Sbjct: 735 GDWSHPMSQQIYDLL 749
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 4/283 (1%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
IS Y + A V + TV WN ++ + +D L YR M G+R
Sbjct: 65 ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRP 124
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D T +L + + G VH+ GF+ +V V N L+SMY +CG ++AR +F
Sbjct: 125 DHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVF 184
Query: 303 DGICDR---TRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQS 358
D + +R VSW ++++ Y Q GD A+++F M E G PD V++++++ C
Sbjct: 185 DEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV 244
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GA GK YA GL ++V V NA++DMY+KCG + +A ++F + K VVSW M+
Sbjct: 245 GAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 304
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
G + G F +AL LF ++ E + N VT+ AV+ G
Sbjct: 305 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGL 347
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 202/636 (31%), Positives = 310/636 (48%), Gaps = 18/636 (2%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ + ++ WN I ++ A + LF M+Q +EP+ TF I AC+ + L +
Sbjct: 89 FSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWG 148
Query: 74 QMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH G+ + S + KC + A ++FD MA RD SW + +A+
Sbjct: 149 REIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES 208
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G+ E L+ ++ M ++ +T M + A L K +H+ + +DV V
Sbjct: 209 GYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVS 268
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
Y KC K A VF + R V++WN+M+ G + +++ + M+ G
Sbjct: 269 TALTKMYMKCGAFKDAREVFECLS--YRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEG 326
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D T ++LS+ P L +G+ +H+ G DV N LI+MYSK G + AR
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDAR 386
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+FD + R VSWT ++ YA + E+ F M G + +T + ++ C
Sbjct: 387 QVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL+ GK GL ++ V NAL+ MY KCGS+ DA +F + + VV+W T+I
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G NG +EAL + + +RPN TF+ VL AC +E+G D GI
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIV 566
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P HY+CM D+L R G L+EA D + ++P+K A +WG LL AC+IH N+EIGE A
Sbjct: 567 --PTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAA 624
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
KLEP +A YV ++ YA G W VA +R MK VKK PG+S I G+ +F
Sbjct: 625 EHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSF 684
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
A D+ H ++ Y L+ L + Y +++
Sbjct: 685 VARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFV 720
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 236/476 (49%), Gaps = 20/476 (4%)
Query: 62 KACAKLSDLIYSQMIHGHIVK---SP-----------FVKCDRLDCAYKIFDEMAVRDVA 107
++C K DL + +H HI++ P + C ++ A ++FD+ + + V
Sbjct: 36 QSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVV 95
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SWN M+ G+A G + LF M+ ++ D T + + A L+ + +H
Sbjct: 96 SWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRV 155
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+ G+ D +V N IS YAKC ++ A VF + R VSW ++ ++
Sbjct: 156 MEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR--DEVSWTTLTGAYAESGYGEE 213
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
SL Y M+ R T +++LS+ AL +G+ +H+H + + DV V L
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTK 273
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY KCG AR +F+ + R ++W MI G+ G L+EA F M G PD T
Sbjct: 274 MYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRAT 333
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+++S C + G L GK A GL +V NALI+MYSK GS+ DAR++F +P
Sbjct: 334 YTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 393
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
++ VVSWTT++ A + VE+ F Q+++ ++ N++T++ VL+AC++ L+ G
Sbjct: 394 KRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKE 453
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
I + G+ +L + + + + G +++A+ + M ++ D W TL+
Sbjct: 454 IH-AEVVKAGLL--ADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNTLI 505
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 195/388 (50%), Gaps = 6/388 (1%)
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G Q D + L Q+ + AK L++ K VH + GV +V + NT + YA C + A
Sbjct: 23 GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA 82
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
+F + +VVSWN M++G + ++ N + M D T VS+LS+
Sbjct: 83 RQLFDKFSNK--SVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
P L GR +H + G D +V N LISMY+KCG + AR +FD + R VSWT
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+ YA+ G +E+L+ + AM P +T ++++S CG ALE GK +
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESE 260
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+V V AL MY KCG+ DARE+F L + V++W TMI G +G+ EA FH
Sbjct: 261 YHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFH 320
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+++E + P+R T+ VL AC G L +G I D +S ++ + + ++
Sbjct: 321 RMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVS---DVRFGNALINMYS 377
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ G +K+A MP K D W TLL
Sbjct: 378 KAGSMKDARQVFDRMP-KRDVVSWTTLL 404
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 8/293 (2%)
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
+++ G ++D V LL S V + L G+ VH H + G +V + NTL+ +Y+ C
Sbjct: 17 QYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHC 76
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G ++ AR LFD +++ VSW MISGYA +G EA LF M+ PD T +S++
Sbjct: 77 GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSIL 136
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S C L G+ GL ++ V NALI MY+KCGS+ DAR +F A+ + V
Sbjct: 137 SACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEV 196
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SI 470
SWTT+ A +G E+L +H +++ +RP+R+T++ VL AC LEKG I I
Sbjct: 197 SWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHI 256
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
++ + Y+ ++ + + + + G K+A + + + + D W T++
Sbjct: 257 VESE-----YHSDVRVSTALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMI 303
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 202/619 (32%), Positives = 322/619 (52%), Gaps = 25/619 (4%)
Query: 31 NKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-------- 82
N A + L LFR ++ + +T + K C L ++ +HG+ +K
Sbjct: 160 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 219
Query: 83 ------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
+ + KC R+ A +FD M RDV WN ML G+ Q+G + +LF G
Sbjct: 220 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 279
Query: 137 IQADFVTVMGLTQAAIHA--KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
++ D +V + + A L L K VH + G+D+DVSV N+ ++ Y+K
Sbjct: 280 LRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYF 339
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
A VF ++ ++SWNSM++ C ++S+N + +++ G + D T+ S+ +
Sbjct: 340 AREVFNDMKHL--DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLAT 397
Query: 255 V-----CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
C L QG+ +H+H I GFD D+ V + ++ MY KCGD+ +A ++F+ I
Sbjct: 398 AAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPD 457
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
V+WT+MISG G+ D+ALR++ M + +PD T ++I ALE G+
Sbjct: 458 DVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHA 517
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+ V +L+DMY+KCG+I DA LF + + + W M+ G A +G E
Sbjct: 518 NVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEE 577
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
A++LF + + P+RV+F+ +L AC+H G + + +D GI PE++HYSC
Sbjct: 578 AVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE--PEIEHYSC 635
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
+ D LGR G ++EA +++MP K+ A I LL AC+I ++E G+ VA LF LEP
Sbjct: 636 LVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFD 695
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAES 609
+A YV ++N YA RWD V + R MMKR VKK PG S + F +DR H ++
Sbjct: 696 SAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQA 755
Query: 610 ELTYPVLDCLALHSREEAY 628
++ Y ++ + RE+ Y
Sbjct: 756 DIIYDKVEEMMKTIREDGY 774
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 237/483 (49%), Gaps = 27/483 (5%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM-----GFLENVLRLFYNMRLVGIQA 139
+ KC L A ++FD RD+ +WNA+L +A G + L LF +R
Sbjct: 122 YSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGST 181
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
+T+ + + +++ L + VH + I IG++ DV V ++ Y+KC ++ A L+F
Sbjct: 182 TRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLF 241
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS--FVCP 257
+ E R VV WN M+ G ++ + +G R D +V +L+ +
Sbjct: 242 DWMRE--RDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGT 299
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ L G+ VH + G D DVSV N+L++MYSK G AR +F+ + +SW +MI
Sbjct: 300 DDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMI 359
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI-----SGCGQSGALELGKWFDNYAC 372
S AQ +E++ LF + G PD T+ S+ CG L+ GK +A
Sbjct: 360 SSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAI 419
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
G ++ V + ++DMY KCG + +A +F + V+WT+MI+GC NG +AL
Sbjct: 420 KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALR 479
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCM 490
++H++ + + P+ TF +++A + LE+G + ++I+ D +P + + +
Sbjct: 480 IYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLD---CVSDPFVG--TSL 534
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK-LEPHS 549
D+ + G +++A + M +++ A +W +L H N E A LFK ++ H
Sbjct: 535 VDMYAKCGNIEDAYRLFKKMNVRNIA-LWNAMLVGLAQHGNAE----EAVNLFKSMKSHG 589
Query: 550 AAP 552
P
Sbjct: 590 IEP 592
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL + + L+ G+ H+ + G D + N L++MYSKCG + SAR +FD +R
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 310 RVSWTAMISGYA-----QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
V+W A++ YA G+ E L LF + A+ +T+ ++ C SG L
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ YA GL+ +V V AL+++YSKCG + DAR LF + E+ VV W M+ G
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
G EA LF + LRP+ + +L C G
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAG 298
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I V+ + L ++ +M+Q+ + P+ TF + KA + ++ L + +H +++
Sbjct: 461 WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI 520
Query: 82 K-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K PFV KC ++ AY++F +M VR++A WNAMLVG AQ G E +
Sbjct: 521 KLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVN 580
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS-LLKSVHSFGIHIGVDADV 176
LF +M+ GI+ D V+ +G+ A HA S + +HS G++ ++
Sbjct: 581 LFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEI 630
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 213/625 (34%), Positives = 332/625 (53%), Gaps = 27/625 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I V+ H+ + F Q+ ++I P+ TFP + KAC L D + IH
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWA 241
Query: 81 VK-----SPFVKCDRL---------DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + FV + A +FD+M RD+ SWNAM+ G Q G L
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ MRL GI+ +FVTV+ + +S +H + I G++ D+ V N I+ Y
Sbjct: 302 DVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMY 361
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK +L+ A F + + VVSWNS++A D + F+ M NGF+ D+ T
Sbjct: 362 AKFGNLEDARKAFQ--QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGI 305
+VSL S R VH + G+ + DV + N ++ MY+K G +DSA +F+ I
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELG 364
+ +SW +I+GYAQ G EA+ ++ ME E+ P+ T +S++ GAL+ G
Sbjct: 480 PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
L +V V LID+Y KCG + DA LFY +P++ V+W +I+ ++
Sbjct: 540 MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPE 483
G + L LF ++++ ++P+ VTF+++L AC+H+GF+E+G W ++Q + GI P
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ--EYGI--KPS 655
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
L HY CM DLLGR G L+ A DF++ MP++ DA IWG LL AC+IH NIE+G++ + LF
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 715
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+++ + YV ++N YA G+W+GV +R++ + +KK PG S +N K F +
Sbjct: 716 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 775
Query: 604 RYHAESELTYPVLDCLALHSREEAY 628
+ H + + Y L L + Y
Sbjct: 776 QSHPKCKEIYEELRVLTAKMKSLGY 800
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 228/443 (51%), Gaps = 20/443 (4%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKH 156
FD++ +DV +WN+M+ + G + FY + LV I+ DF T + +A
Sbjct: 174 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGT 230
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + +H + +G +V V + I Y++ +A +F + R + SWN+M+
Sbjct: 231 LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP--FRDMGSWNAMI 288
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYG 274
+G +L+ M G +++ TVVS+L VCP+ + L+H + I +G
Sbjct: 289 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP--VCPQLGDISTAMLIHLYVIKHG 346
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ D+ V N LI+MY+K G+++ AR F + VSW ++I+ Y Q D A F
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFV 406
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKC 393
M+ G PDL+T++S+ S QS + + + G L ++V++ NA++DMY+K
Sbjct: 407 KMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKL 466
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAV 452
G + A ++F +P K V+SW T+I G A NG EA++++ + E ++ PN+ T++++
Sbjct: 467 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 526
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSM 510
L A H G L++G I + I N LD + +C+ D+ G+ G+L +A+ +
Sbjct: 527 LPAYAHVGALQQGMKI-----HGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581
Query: 511 PIKSDAGIWGTLLCACKIHLNIE 533
P +S W ++ IH + E
Sbjct: 582 PQESSV-TWNAIISCHGIHGHAE 603
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 201/440 (45%), Gaps = 19/440 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WN+ I + A + L + +M+ I+ N +T I C +L D+ + +IH
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+++K + + K L+ A K F +M + DV SWN+++ + Q
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVT 400
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 183
F M+L G Q D +T++ L ++ +SVH F + G + DV + N +
Sbjct: 401 AHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRL 242
YAK L A VF I ++ V+SWN+++ G +++ Y+ M
Sbjct: 461 DMYAKLGLLDSAHKVFEIIP--VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T VS+L ++ AL QG +H I LDV V LI +Y KCG + A LF
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ + V+W A+IS + G ++ L+LF M G PD VT +S++S C SG +E
Sbjct: 579 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 638
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
GKW G+K ++ ++D+ + G + A + +P + S W ++ C
Sbjct: 639 EGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGAC 698
Query: 422 ALNGEFVEALDLFHQLMELD 441
++G +L E+D
Sbjct: 699 RIHGNIELGKFASDRLFEVD 718
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 12/244 (4%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-P 343
L+++Y+ GD+ +R FD I + +W +MIS Y G EA+ F+ + E+ P
Sbjct: 157 LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 216
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T ++ C G L G+ +A G + NV V +LI MYS+ G G AR LF
Sbjct: 217 DFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+P + + SW MI+G NG +ALD+ ++ ++ N VT +++L C G +
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIS 333
Query: 464 KGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
I + I + E D + + + ++ + G L++A Q M I +D W +
Sbjct: 334 TAMLIHLYV-----IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFI-TDVVSWNS 387
Query: 522 LLCA 525
++ A
Sbjct: 388 IIAA 391
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
G ++ + L+++Y+ G + +R F +P+K V +W +MI+ NG F EA+
Sbjct: 145 AGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGC 204
Query: 434 FHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKG-----WAISIIQYDDKGISYNPELDHY 487
F+QL+ + ++RP+ TF VL+AC G L G WA + G +N +
Sbjct: 205 FYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKL------GFQWNVFVA-- 253
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + + R G A MP + D G W ++
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMI 288
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 307/574 (53%), Gaps = 19/574 (3%)
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++HG++VK S + K +R++ A +FDEM RD+ SWN+++ G A G
Sbjct: 5 VVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNG 64
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ + LF M L G + D T++ + A + + + + VH + + G+ ++ S+ N
Sbjct: 65 LYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGN 124
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ Y+ C D + +F +E++ VVSW +M+ T FD ++ M G
Sbjct: 125 ALLDMYSNCSDWRSTNKIFRNMEQK--NVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
R DV + S L +F E+L G+ VH + I G + + V N L+ MY KCG ++ AR
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+FD + + +SW +I GY++ +EA LF M P+ VT+ ++ +
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLR-PNAVTMACILPAAASLSS 301
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LE G+ YA G ++ V NAL+DMY KCG++ AR LF L K ++SWT MIAG
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
++G +A+ LF Q+ ++P+ +F A+L AC+H+G ++GW ++ I
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIE- 420
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P+L HY+CM DLL G LKEA +F+++MPI+ D+ IW +LL C+IH N+++ E VA
Sbjct: 421 -PKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAE 479
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+F+LEP + YV +AN YA RW+ V ++ + +++ G S + GK F
Sbjct: 480 MVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFF 539
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
AE+R H + LD +A +EE + K+
Sbjct: 540 AENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKY 573
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 205/451 (45%), Gaps = 21/451 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WNS I + K + LF +M E ++ T + AC + ++HG
Sbjct: 50 IISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHG 109
Query: 79 HIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ V++ + C KIF M ++V SW AM+ + + G +
Sbjct: 110 YSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDK 169
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
V LF M L GI+ D + A + L KSVH + I G++ + V N +
Sbjct: 170 VAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALME 229
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC ++ A +F + + + +SWN+++ G + + +++ + M+ R +
Sbjct: 230 MYVKCGYMEEARFIFDHVTK--KDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNA 286
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ +L + +L +GR +H++ + G+ D V N L+ MY KCG + AR LFD
Sbjct: 287 VTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDM 346
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ ++ +SWT MI+GY G +A+ LF M+ +G PD + +++ C SG + G
Sbjct: 347 LTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEG 406
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCA 422
++F+ ++ + ++D+ G++ +A E +P E W +++ GC
Sbjct: 407 WRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCR 466
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
++ A + + EL+ P + +L
Sbjct: 467 IHRNVKLAEKVAEMVFELE--PENTGYYVLL 495
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 4/263 (1%)
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+ G +VH + + YGF +V N LIS Y+K I+ A ++FD + R +SW ++I G
Sbjct: 1 MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
A G D+A+ LF M G+ D T+LS++ C QS +G Y+ GL
Sbjct: 61 ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ NAL+DMYS C ++F + +K VVSWT MI G F + LF ++
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
+RP+ + L A L+ G ++ + GI L + + ++ + G +
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRN-GIE--EVLPVANALMEMYVKCGYM 237
Query: 501 KEALDFVQSMPIKSDAGIWGTLL 523
+EA F+ K D W TL+
Sbjct: 238 EEA-RFIFDHVTKKDTISWNTLI 259
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 20/258 (7%)
Query: 11 NRIYRS---STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
N+I+R+ + W + I K LF++M I P+ A A
Sbjct: 140 NKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGN 199
Query: 68 SDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAML 113
L + + +HG+ +++ +VKC ++ A IFD + +D SWN ++
Sbjct: 200 ESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLI 259
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G+++ LF M L+ ++ + VT+ + AA L + +H++ + G
Sbjct: 260 GGYSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYL 318
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
D V N + Y KC L +A +F + + ++SW M+AG + D++ +
Sbjct: 319 EDNFVANALVDMYVKCGALLLARRLFDMLTN--KNLISWTIMIAGYGMHGRGRDAIALFE 376
Query: 234 HMMYNGFRLDVTTVVSLL 251
M +G + D + ++L
Sbjct: 377 QMKGSGIQPDAGSFSAIL 394
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 331/648 (51%), Gaps = 44/648 (6%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I + +N L F +M+ + + NN TFP + KACA L L+ + +H ++
Sbjct: 20 HWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYL 78
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEM--AVRDVASWNAMLVGFAQMGFLEN 124
+ + KC A ++FDEM DV SW A++ ++ G ++
Sbjct: 79 TRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDE 138
Query: 125 VLRLFYNMRLVG-------IQADFVTVMGLTQAAIHAKHLSLLK---SVHSFGIHIGVDA 174
F MR + D V++ L A + L+ +VH + G
Sbjct: 139 AFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGV 198
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ N+ + Y+ C D+ A VF GI R VVSWNS+++G + + +L +
Sbjct: 199 STHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFED 258
Query: 235 MMYNG---FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLIS 287
M+ G + TV++LL S + VH + L DV V+ L+
Sbjct: 259 MVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLD 318
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL----- 342
M+++CG++ AR +FDG+ + V W+AMI+GY Q +EALRLF M G +
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378
Query: 343 -PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
P+ VT++S+I+ C + GA YA + GL + + +ALIDM +KCG I R+
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQ 438
Query: 402 LFYALPE--KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F + E + VVSW++MI ++GE AL+LF ++ PN +T+++VL AC+H
Sbjct: 439 VFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHA 498
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G +E+G + D G+S P HY+C+ DLLGR G L EA + + +MPIK+D +W
Sbjct: 499 GLVEQGKSCFNSMEKDYGMS--PTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALW 556
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
G+LL AC +H N ++GE V + L+ +S +V +AN Y GRWD V +R ++R+
Sbjct: 557 GSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRS 616
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEA 627
++K PGQS I + +F AEDR H ESE+ Y LD L R+ A
Sbjct: 617 GLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAA 664
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 321/631 (50%), Gaps = 19/631 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V ++ + +F +M+ ++I+PN++TF + CA + L +HG V
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186
Query: 82 K------SP--------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
SP + KC L A K+FD D+ SWN ++ G+ Q G +
Sbjct: 187 SCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEH 246
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI+ D +T L K +H + I V DV + + I Y
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++MA+ + C TVV +M++G K ++L +R ++ + T
Sbjct: 307 KCRDVEMAQKILCQ-SSSFDTVVC-TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTF 364
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+ +F AL G+ +H I D V + ++ MY+KCG +D A +F+ I +
Sbjct: 365 SSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITE 424
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ + W +MI+ +Q G EA+ LF M G D V++ +S C AL GK
Sbjct: 425 KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEI 484
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G L+ ++ ++LIDMY+KCG++ +R +F + E+ VSW ++I+ +G+
Sbjct: 485 HGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDL 544
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E L LFH+++ ++P+ VTFL ++ AC H G +++G + ++ GI ++HY
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIP--ARMEHY 602
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+AD+ GR G+L EA + + SMP DAG+WGTLL AC IH N+E+ E + LF L+P
Sbjct: 603 ACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDP 662
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV +AN A G+W V +R++MK V+K PG S +N T F A D H
Sbjct: 663 LNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHP 722
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
+ Y VLD L L ++E Y L ++P H
Sbjct: 723 LTAQIYSVLDSLLLELKKEGYVPQL-YLPMH 752
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 205/461 (44%), Gaps = 16/461 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
WN IR + + LL + +M + P+ TFP++ KAC L + +++H +
Sbjct: 26 WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVN 85
Query: 81 ---------VKSPFVKC----DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
V S +K L A +FD + +D WN ML G+ + G N ++
Sbjct: 86 LMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR I+ + VT + L L +H + G++ D V NT ++ Y+
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYS 205
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L+ A +F + +VSWN +++G ++ + +R M+ G + D T
Sbjct: 206 KCQCLQAARKLFDTSPQ--SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITF 263
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L +L + +H + I + LDV + + LI +Y KC D++ A+ +
Sbjct: 264 ASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSS 323
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
V T MISGY G EAL F + P VT S+ AL LGK
Sbjct: 324 FDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKEL 383
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
L + V +A++DMY+KCG + A +F + EK + W +MI C+ NG
Sbjct: 384 HGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRP 443
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
EA++LF Q+ R + V+ L AC + L G I
Sbjct: 444 GEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEI 484
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 205/456 (44%), Gaps = 19/456 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN I V + LFR M I+P+++TF +L L + + I
Sbjct: 223 SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEI 282
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG+I++ V KC ++ A KI + + D M+ G+ G
Sbjct: 283 HGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKN 342
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L F + ++ VT + A L+L K +H I +D V +
Sbjct: 343 KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAI 402
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAKC L +A VF I E + + WNSM+ C+ + +++N +R M G R
Sbjct: 403 LDMYAKCGRLDLACRVFNRITE--KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D ++ LS+ AL G+ +H I D+ ++LI MY+KCG+++ +R +F
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + +R VSW ++IS Y GDL E L LF M G PD VT L +IS CG +G ++
Sbjct: 521 DRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAG 420
G +++ G+ + + DM+ + G + +A E ++P W T++
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGA 640
Query: 421 CALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQA 455
C ++G A L +LD L LA +QA
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQA 676
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 206/444 (46%), Gaps = 10/444 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+V+ L A +F + + ++WN M+ GF MG L + M G+ D T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A K + + K VH +G+ DV V ++ I YA+ L A+ +F I +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ V WN M+ G +++ + M ++ + + T +LS L G
Sbjct: 122 K--DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H + G +LD V NTL++MYSKC + +AR LFD VSW +ISGY Q G
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+ EA LF M +AG PD +T S + + +L+ K Y + +V + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALID+Y KC + A+++ V TTMI+G LNG+ EAL+ F L++ ++P
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
VTF ++ A L G + SII+ + + S + D+ + G+L
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIK-----TKLDEKCHVGSAILDMYAKCGRLDL 414
Query: 503 ALDFVQSMPIKSDAGIWGTLLCAC 526
A + K DA W +++ +C
Sbjct: 415 ACRVFNRITEK-DAICWNSMITSC 437
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY + GS+ DA+ LFY L +W MI G + G+F AL + +++ + P++ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F V++AC ++ G I+ + ++ S + L G L +A
Sbjct: 61 FPYVVKACCGLKSVKMG---KIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFD 117
Query: 509 SMPIKSDAGIWGTLL 523
++P K D+ +W +L
Sbjct: 118 NIPQK-DSVLWNVML 131
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/631 (32%), Positives = 321/631 (50%), Gaps = 19/631 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V ++ + +F +M+ ++I+PN++TF + CA + L +HG V
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186
Query: 82 ------KSP--------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
SP + KC L A K+FD + D+ SWN ++ G+ Q G +
Sbjct: 187 GCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEH 246
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI+ D +T L K +H + I V DV + + I Y
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++MA+ C TVV +M++G K ++L +R ++ + T
Sbjct: 307 KCRDVEMAQKNLCQ-SSSFDTVVC-TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTF 364
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+ +F AL G+ +H I D V + ++ MY+KCG +D A +F+ I +
Sbjct: 365 SSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITE 424
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ + W +MI+ +Q G EA+ LF M G D V++ +S C AL GK
Sbjct: 425 KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEI 484
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G L+ ++ ++LIDMY+KCG++ +R +F + EK VSW ++I+ +G+
Sbjct: 485 HGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDL 544
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E L LFH+++ ++P+ VTFL ++ AC H G +++G + ++ GI ++HY
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIP--ARMEHY 602
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+AD+ GR G+L EA + + SMP DAG+WGTLL AC IH N+E+ E + LF L+P
Sbjct: 603 ACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDP 662
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV +AN A G+W V +R++MK V+K PG S +N T F A D H
Sbjct: 663 LNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHP 722
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
+ Y VLD L L ++E Y L ++P H
Sbjct: 723 LTAQIYSVLDSLLLELKKEGYVPQL-YLPMH 752
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 234/529 (44%), Gaps = 26/529 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
WN IR + + LL + +M + P+ TFP++ KAC L + +++H +
Sbjct: 26 WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVN 85
Query: 81 ---------VKSPFVKC----DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
V S +K L A +FD + +D WN ML G+ + G N ++
Sbjct: 86 LMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR I+ + VT + L L +H + G++ D V NT ++ Y+
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYS 205
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L+ A +F + + +VSWN +++G ++ + +R M+ G + D T
Sbjct: 206 KCQCLQAARKLFDTLPQ--SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITF 263
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L +L + +H + I + LDV + + LI +Y KC D++ A+ +C
Sbjct: 264 ASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQ---KNLCQ 320
Query: 308 RTR---VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ V T MISGY G EAL F + P VT S+ AL LG
Sbjct: 321 SSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLG 380
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K L + V +A++DMY+KCG + A +F + EK + W +MI C+ N
Sbjct: 381 KELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQN 440
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EA++LF Q+ R + V+ L AC + L G I + KG +L
Sbjct: 441 GRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMI--KG-PLRSDL 497
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
S + D+ + G L + M K++ W +++ A H +++
Sbjct: 498 YAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVS-WNSIISAYGNHGDLK 545
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 207/456 (45%), Gaps = 19/456 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN I V + LFR M I+P+++TF +L L + + I
Sbjct: 223 SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEI 282
Query: 77 HGHIVKSP-----FVKCDRLDCAYKIFD-EMAVR--------DVASWNAMLVGFAQMGFL 122
HG+I++ F+K +D +K D EMA + D M+ G+ G
Sbjct: 283 HGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKN 342
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L F + ++ VT + A L+L K +H I +D V +
Sbjct: 343 KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAI 402
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAKC L +A VF I E + + WNSM+ C+ + +++N +R M G R
Sbjct: 403 LDMYAKCGRLDLACRVFNRITE--KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D ++ LS+ AL G+ +H I D+ ++LI MY+KCG+++ +R +F
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + ++ VSW ++IS Y GDL E L LF M G PD VT L +IS CG +G ++
Sbjct: 521 DRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAG 420
G +++ G+ + + DM+ + G + +A E ++P W T++
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGA 640
Query: 421 CALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQA 455
C ++G A L +LD L LA +QA
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQA 676
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 206/444 (46%), Gaps = 10/444 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+V+ L A +F + + ++WN M+ GF MG L + M G+ D T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A K + + K VH +G+ DV V ++ I YA+ L A+ +F I +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ V WN M+ G +++ + M ++ + + T +LS L G
Sbjct: 122 K--DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H + G +LD V NTL++MYSKC + +AR LFD + VSW +ISGY Q G
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+ EA LF M +AG PD +T S + + +L+ K Y + +V + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALID+Y KC + A++ V TTMI+G LNG+ EAL+ F L++ ++P
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
VTF ++ A L G + SII+ + + S + D+ + G+L
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIK-----TKLDEKCHVGSAILDMYAKCGRLDL 414
Query: 503 ALDFVQSMPIKSDAGIWGTLLCAC 526
A + K DA W +++ +C
Sbjct: 415 ACRVFNRITEK-DAICWNSMITSC 437
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY + GS+ DA+ LFY L +W MI G + G+F AL + +++ + P++ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F V++AC ++ G I+ + ++ S + L G L +A
Sbjct: 61 FPYVVKACCGLKSVKMG---KIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFD 117
Query: 509 SMPIKSDAGIWGTLL 523
++P K D+ +W +L
Sbjct: 118 NIPQK-DSVLWNVML 131
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 218/673 (32%), Positives = 332/673 (49%), Gaps = 72/673 (10%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
PP +Y WNS IR N A+K L F M P+N TFPF+ KAC
Sbjct: 85 FPPSDAGVY------HWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACG 138
Query: 66 KLSDL--------------IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
++S + S + G+ + + + +C L A K+FDEM V DV SWN+
Sbjct: 139 EISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNS 198
Query: 112 MLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ +A++G + L +F M G + D +T++ + SL K H F +
Sbjct: 199 IIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTS 258
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
+ ++ V N + YAK + A VF + ++ VVSWN+MVAG + +F+D++
Sbjct: 259 EMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMP--VKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 231 FY-----------------------------------RHMMYNGFRLDVTTVVSLLSSFV 255
+ R M+ +G + + T++S+LS
Sbjct: 317 LFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVS-------VINTLISMYSKCGDIDSARVLFDGICDR 308
AL+ G+ +H + I Y DL + VIN LI MY+KC +D AR +FD + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPK 436
Query: 309 TR--VSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG 364
R V+WT MI GY+Q GD ++AL L M E P+ T+ + C AL +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIG 496
Query: 365 KWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
K YA + V N LIDMY+KCG IGDAR +F + EK V+WT+++ G +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGM 556
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G EAL +F ++ + + + VT L VL AC+H+G +++G D G+S PE
Sbjct: 557 HGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPE 616
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
HY+C+ DLLGR G+L AL ++ MP++ +W LL C+IH +E+GEY A +
Sbjct: 617 --HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKIT 674
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+L ++ Y ++N YA GRW V IR++M+ +KK PG S T TF D
Sbjct: 675 ELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGD 734
Query: 604 RYHAESELTYPVL 616
+ H ++ Y VL
Sbjct: 735 KTHPHAKEIYQVL 747
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 159/326 (48%), Gaps = 8/326 (2%)
Query: 142 VTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
+ + +T IH K +S +K +H + G+ +++ + IS+Y L A +
Sbjct: 25 TSALEITPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLR 83
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
V WNS++ + + L+ + M + D T + + ++
Sbjct: 84 RFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSV 143
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G H+ GF +V V N L++MYS+CG + AR +FD + VSW ++I Y
Sbjct: 144 RCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESY 203
Query: 321 AQKGDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
A+ G AL +F M G PD +T+++++ C G LGK F +A + + N
Sbjct: 204 AKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQN 263
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V N L+DMY+K G + +A +F +P K VVSW M+AG + G F +A+ LF Q+ E
Sbjct: 264 MFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQE 323
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKG 465
++ + VT+ A + +G+ ++G
Sbjct: 324 EKIKMDVVTWSAAI-----SGYAQRG 344
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/631 (31%), Positives = 322/631 (51%), Gaps = 19/631 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V E + + +F M+ +PN++TF + CA + + +HG ++
Sbjct: 41 WNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVI 100
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
F K +L A K+F+ M +V +WN M+ GF Q GF++
Sbjct: 101 SCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASL 160
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G+ D +T + + L K +H + + G+ DV + + I Y
Sbjct: 161 LFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYF 220
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D+ MA +F + +V ++++G +D+L +R ++ + T+
Sbjct: 221 KCRDVGMACKIF--KQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTL 278
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + L G+ +H++ + +G D V + ++ MY+KCG +D A +F + +
Sbjct: 279 ASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPE 338
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W A+I+ +Q G EA+ LF M G D V++ + +S C AL GK
Sbjct: 339 KDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAI 398
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
++ G V +ALIDMY KCG++ AR +F + EK VSW ++IA +G
Sbjct: 399 HSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHL 458
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+L LFH+++E ++P+ VTFL +L AC H G ++KG ++ GI ++HY
Sbjct: 459 EVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIP--ARMEHY 516
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DL GR G+L EA + +++MP D G+WGTLL AC++H N+E+ E + CL L+P
Sbjct: 517 ACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDP 576
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV ++N +A G+W V IR++MK+ V+K PG S +N T F A D H
Sbjct: 577 ENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHP 636
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
ES Y VL+ L L R+E Y ++P H
Sbjct: 637 ESAQIYSVLNNLLLELRKEGYCPK-PYLPMH 666
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 211/441 (47%), Gaps = 6/441 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD+M +D WN ML GF + G + +++F +MR + + +T +
Sbjct: 26 ARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICAS 85
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+H I G D V N ++ Y+K L A +F + + VV+WN
Sbjct: 86 EALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPD--TNVVTWN 143
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
M+AG D++ + M+ G D T S L S +L QG+ +H + + +
Sbjct: 144 GMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRH 203
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G LDV + + LI +Y KC D+ A +F + V TA+ISGY G ++AL +F
Sbjct: 204 GIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIF 263
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ P+ VT+ S++ C L LGK GL + V +A++DMY+KC
Sbjct: 264 RWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKC 323
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + A ++F +PEK V W +I C+ NG+ EA+DLF Q+ L + V+ A L
Sbjct: 324 GRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAAL 383
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC + L G AI + KG +++ E+ S + D+ G+ G L A M K
Sbjct: 384 SACANLPALHHGKAIH--SFMIKG-AFDSEVFAESALIDMYGKCGNLSVARCVFDMMREK 440
Query: 514 SDAGIWGTLLCACKIHLNIEI 534
++ W +++ A H ++E+
Sbjct: 441 NEVS-WNSIIAAYGSHGHLEV 460
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 109/195 (55%)
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GF++D V ++LI +Y++ G I+ AR LFD + ++ V W M++G+ + G+ + A+++F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M P+ +T S++S C E G S G + +V NAL+ MYSK
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + DA +LF +P+ VV+W MIAG NG EA LF +++ + P+ +TF + L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 454 QACTHTGFLEKGWAI 468
+ T + L++G I
Sbjct: 182 PSVTESASLKQGKEI 196
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/609 (32%), Positives = 314/609 (51%), Gaps = 18/609 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I L +F +M+ + + P+ +T + ACA L DL +H ++
Sbjct: 212 FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF 271
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ +VKC ++ A IF+ +V WN MLV F Q+ L
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ GI+ + T + + + + L + +HS + G ++D+ V I Y+
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L+ A V ++E+ VVSW SM+AG + D+L ++ M G D +
Sbjct: 392 KYGWLEKARRVLEMLKEK--DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S +S A+ QG +H+ G+ DVS+ N L+++Y++CG I A F+ +
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMEL 509
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++ ++SG+AQ G +EAL++F M+ +G ++ T +S +S ++ GK
Sbjct: 510 KDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G V NALI +Y KCGS DA+ F + E+ VSW T+I C+ +G
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+EALDLF Q+ + ++PN VTF+ VL AC+H G +E+G + D+ GI P DHY
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI--RPRPDHY 687
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ D+ GR G+L A F++ MPI +DA +W TLL ACK+H NIE+GE+ A L +LEP
Sbjct: 688 ACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEP 747
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
H +A YV ++N YA+ +W +R MM+ V+K PG+S + F DR H
Sbjct: 748 HDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHP 807
Query: 608 ESELTYPVL 616
+E Y L
Sbjct: 808 LAEQIYNFL 816
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 219/433 (50%), Gaps = 9/433 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++F+E++ RD SW AML G+AQ G E L L+ M G+ + + +
Sbjct: 96 ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
A+ + + +H+ G G +++ V N I+ Y +C ++AE VFC + R V++N
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR--DTVTFN 213
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++++G + +L + M ++G D T+ SLL++ L +G +HS+
Sbjct: 214 TLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA 273
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALRL 332
G D + +L+ +Y KCGD+++A V+F+ DRT V W M+ + Q DL ++ L
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNS-SDRTNVVLWNLMLVAFGQINDLAKSFEL 332
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+AAG P+ T ++ C + ++LG+ + + G + ++ V LIDMYSK
Sbjct: 333 FCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
G + AR + L EK VVSWT+MIAG + +AL F ++ + + P+ + +
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
+ C + +G I Y Y+ ++ ++ + +L R G+++EA + M +
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVS---GYSGDVSIWNALVNLYARCGRIREAFSSFEEMEL 509
Query: 513 KSDAGIWGTLLCA 525
K GI G L +
Sbjct: 510 KD--GITGNGLVS 520
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 239/522 (45%), Gaps = 20/522 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W + + + L L+RQM + + P + +C K ++IH
Sbjct: 111 WVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGY 170
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G+ V + +++C A ++F +M RD ++N ++ G AQ G E+ L
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ G+ D VT+ L A L +HS+ G+ +D + + + Y
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A ++F + VV WN M+ + S + M G R + T
Sbjct: 291 KCGDVETALVIFNSSDR--TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+L + C + G +HS + GF+ D+ V LI MYSK G ++ AR + + + +
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSWT+MI+GY Q +AL F M+ G PD + + S ISGC A+ G
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G +V + NAL+++Y++CG I +A F + K ++ +++G A +G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLH 528
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EAL +F ++ + ++ N TF++ L A + +++G I + G S+ E+ +
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIH-ARVIKTGHSFETEVGN- 586
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ L G+ G ++A M +++ W T++ +C H
Sbjct: 587 -ALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQH 626
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 196/426 (46%), Gaps = 11/426 (2%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSL 159
M R AS L GF VL LF + R G L + + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ +H+ + G+ V N I Y+K + A VF E R VSW +M++G
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVF--EELSARDNVSWVAMLSGY 118
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+++L YR M G + S+LSS E QGRL+H+ G +GF ++
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V N +I++Y +CG A +F + R V++ +ISG+AQ G + AL +F M+ +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD VT+ S+++ C G L+ G +Y G+ + ++ +L+D+Y KCG + A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F + VV W M+ + ++ +LF Q+ +RPN+ T+ +L+ CT T
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
++ G I + + E D Y + D+ + G L++A ++ + K D
Sbjct: 359 REIDLGEQIHSLS-----VKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVV 412
Query: 518 IWGTLL 523
W +++
Sbjct: 413 SWTSMI 418
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 136/312 (43%), Gaps = 21/312 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+ + + + W S I V L F++M++ I P+N+ CA ++
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ IH I S + +C R+ A+ F+EM ++D + N ++
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVS 520
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GFAQ G E L++F M G++ + T + A+ + + K +H+ I G
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V N IS Y KC + A++ F + E R VSWN+++ C+ + ++L+ +
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSE--RNEVSWNTIITSCSQHGRGLEALDLFDQ 638
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPE-ALVQGRLVH--SHGIHYGFDLDVSVINTLISMYSK 291
M G + + T + +L++ C LV+ L + S YG +I ++ +
Sbjct: 639 MKKEGIKPNDVTFIGVLAA--CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 292 CGDIDSARVLFD 303
G +D A+ +
Sbjct: 697 AGQLDRAKKFIE 708
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 212/625 (33%), Positives = 331/625 (52%), Gaps = 27/625 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I V+ H+ + F Q+ ++I P+ TFP + KAC L D + IH
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWA 241
Query: 81 VK-----SPFVKCDRL---------DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + FV + A +FD+M RD+ SWNAM+ G Q G L
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ MRL GI+ +FVTV+ + +S +H + I G++ D+ V N I+ Y
Sbjct: 302 DVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMY 361
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK +L+ A F + + VVSWNS++A D + F+ M NGF+ D+ T
Sbjct: 362 AKFGNLEDARKAFQ--QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGI 305
+VSL S R VH + G+ + DV + N ++ MY+K G +DSA +F+ I
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELG 364
+ +SW +I+GYAQ G EA+ ++ ME E+ P+ T +S++ GAL+ G
Sbjct: 480 LVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
L +V V LID+Y KCG + DA LFY +P++ V+W +I+ ++
Sbjct: 540 MRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPE 483
G + L LF ++++ ++P+ VTF+++L AC+H+GF+E+G W ++Q + GI P
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ--EYGI--KPS 655
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
L HY CM DLLGR G L+ A F++ MP++ DA IWG LL AC+IH NIE+G++ + LF
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 715
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+++ + YV ++N YA G+W+GV +R++ + +KK PG S +N K F +
Sbjct: 716 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 775
Query: 604 RYHAESELTYPVLDCLALHSREEAY 628
+ H + + Y L L + Y
Sbjct: 776 QSHPKCKEIYEELRVLTAKMKSLGY 800
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 227/443 (51%), Gaps = 20/443 (4%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKH 156
FD++ +DV +WN+M+ + G + FY + LV I+ DF T + +A
Sbjct: 174 FDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGT 230
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + +H + +G +V V + I Y++ +A +F + R + SWN+M+
Sbjct: 231 LVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP--FRDMGSWNAMI 288
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYG 274
+G +L+ M G +++ TVVS+L VCP+ + L+H + I +G
Sbjct: 289 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP--VCPQLGDISTAMLIHLYVIKHG 346
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ D+ V N LI+MY+K G+++ AR F + VSW ++I+ Y Q D A F
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFV 406
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKC 393
M+ G PDL+T++S+ S QS + + + G L ++V++ NA++DMY+K
Sbjct: 407 KMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKL 466
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAV 452
G + A ++F + K V+SW T+I G A NG EA++++ + E ++ PN+ T++++
Sbjct: 467 GLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 526
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSM 510
L A H G L++G I + I N LD + +C+ D+ G+ G+L +A+ +
Sbjct: 527 LPAYAHVGALQQGMRI-----HGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581
Query: 511 PIKSDAGIWGTLLCACKIHLNIE 533
P +S W ++ IH + E
Sbjct: 582 PQESSV-TWNAIISCHGIHGHAE 603
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 200/440 (45%), Gaps = 19/440 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WN+ I + A + L + +M+ I+ N +T I C +L D+ + +IH
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+++K + + K L+ A K F +M + DV SWN+++ + Q
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVT 400
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 183
F M+L G Q D +T++ L ++ +SVH F + G + DV + N +
Sbjct: 401 AHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRL 242
YAK L A VF I ++ V+SWN+++ G +++ Y+ M
Sbjct: 461 DMYAKLGLLDSAHKVFEII--LVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T VS+L ++ AL QG +H I LDV V LI +Y KCG + A LF
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ + V+W A+IS + G ++ L+LF M G PD VT +S++S C SG +E
Sbjct: 579 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 638
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
GKW G+K ++ ++D+ + G + A +P + S W ++ C
Sbjct: 639 EGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGAC 698
Query: 422 ALNGEFVEALDLFHQLMELD 441
++G +L E+D
Sbjct: 699 RIHGNIELGKFASDRLFEVD 718
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 12/244 (4%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-P 343
L+++Y+ GD+ +R FD I + +W +MIS Y G EA+ F+ + E+ P
Sbjct: 157 LVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 216
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T ++ C G L G+ +A G + NV V +LI MYS+ G G AR LF
Sbjct: 217 DFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+P + + SW MI+G NG +ALD+ ++ ++ N VT +++L C G +
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIS 333
Query: 464 KGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
I + I + E D + + + ++ + G L++A Q M I +D W +
Sbjct: 334 TAMLIHLYV-----IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFI-TDVVSWNS 387
Query: 522 LLCA 525
++ A
Sbjct: 388 IIAA 391
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
G ++ + L+++Y+ G + +R F +P+K V +W +MI+ NG F EA+
Sbjct: 145 AGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGC 204
Query: 434 FHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKG-----WAISIIQYDDKGISYNPELDHY 487
F+QL+ + ++RP+ TF VL+AC G L G WA + G +N +
Sbjct: 205 FYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKL------GFQWNVFVA-- 253
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + + R G A MP + D G W ++
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMI 288
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 326/618 (52%), Gaps = 22/618 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I E + L+ QM ++ P++ TF I K+C+ L D ++ +H H++
Sbjct: 167 WTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVL 226
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F K ++ A +F + ++D+ SW +M+ GF+Q+G+ L
Sbjct: 227 KSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALC 286
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS--LLKSVHSFGIHIGVDADVSVCNTWISS 185
F M + V G +A +K L + +H I G+ +D+ +
Sbjct: 287 HFREMLSQSVYQPNEFVFGSAFSAC-SKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC L+ A VF IE+ +V+WN+++AG +S +F+ M + G +
Sbjct: 346 YAKCGFLESARTVFYHIEKP--DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDV 403
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
TV+SLL + P L G VHS+ + GF+LD+ V N+L+SMYSKC +++ A +F+ I
Sbjct: 404 TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDI 463
Query: 306 CDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
++ VSW +++ Q+ E LRL M A+ PD VT+ +++ GQ + E+G
Sbjct: 464 GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ GL ++ V NALI+MY+KCGS+ AR++F ++ ++SW+++I G A
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EA +LF + L ++PN +TF+ +L AC+H G +E+G + +D IS P
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRIS--PTK 641
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+H SCM DLL R G L A DF++ MP D +W TLL ACK+H N+E+G+ A + K
Sbjct: 642 EHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLK 701
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
++P ++A V + N +A G W A +R+ M+R V K PGQS I K F AED
Sbjct: 702 IDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDN 761
Query: 605 YHAESELTYPVLDCLALH 622
H E Y +L+ L L
Sbjct: 762 LHPERGKIYTMLEELMLQ 779
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 213/454 (46%), Gaps = 26/454 (5%)
Query: 34 EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK----------- 82
EA K +F++ + ++ ++T+ + AC+ L L + + IH H++
Sbjct: 80 EALKAFDIFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQN 137
Query: 83 ---SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
S + KC L A +FD M +++V SW +M+ G+++ G +N + L+ M G
Sbjct: 138 HILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIP 197
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D T + ++ L + +H+ + AD+ N IS Y K + A VF
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF 257
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM----YNGFRLDVTTVVSLLSSFV 255
I ++ ++SW SM+AG + ++L +R M+ Y + S S +
Sbjct: 258 SRI--IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLL 315
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
P+ GR +H I +G D+ +L MY+KCG ++SAR +F I V+W A
Sbjct: 316 EPDC---GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNA 372
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+I+G+A + E+ F M G +P+ VTVLS++ C + L G +Y G
Sbjct: 373 IIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMG 432
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLF 434
++ VCN+L+ MYSKC ++ DA ++F + K +VSW T++ C + E L L
Sbjct: 433 FNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLT 492
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ ++P+ VT VL + E G I
Sbjct: 493 KLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQI 526
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 181/386 (46%), Gaps = 6/386 (1%)
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
VT L A + L + +H + D+ + N +S Y KC LK A +F
Sbjct: 99 VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDS 158
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ L+ VVSW SM++G + + D+++ Y M+ +G D T S++ S +
Sbjct: 159 MP--LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFK 216
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
R +H+H + F D+ N LISMY+K + A +F I + +SW +MI+G++
Sbjct: 217 LARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFS 276
Query: 322 QKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q G EAL F M + P+ S S C + + G+ GL ++
Sbjct: 277 QLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL 336
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+L DMY+KCG + AR +FY + + +V+W +IAG A E+ F Q+
Sbjct: 337 FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHT 396
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
L PN VT L++L AC+ L G I + Y K + +N ++ + + + + L
Sbjct: 397 GLVPNDVTVLSLLCACSEPVMLNHG--IQVHSYIVK-MGFNLDIPVCNSLLSMYSKCSNL 453
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCAC 526
+AL + + K+D W TLL AC
Sbjct: 454 NDALQVFEDIGNKADIVSWNTLLTAC 479
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I + I WN+ + + +N+A + L L + M + I+P+++T + + +++
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522
Query: 73 SQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
IH I+KS + KC L+CA K+FD + D+ SW++++VG+AQ
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVS 177
G + LF MR +G++ + +T +G+ A H + LK + +
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
C+ + A+ L +AE F + VV W +++A C
Sbjct: 643 HCSCMVDLLARAGCLDVAE-DFIKQMPFVPDVVVWKTLLAAC 683
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/637 (30%), Positives = 337/637 (52%), Gaps = 25/637 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQN-----DIEPNNLTFPFIAKACAKLSDLIY 72
T+ WN+ +R + E +TL LFRQM + P+N + K+CA L L+
Sbjct: 201 TVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLL 260
Query: 73 SQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++IHG + K + KC +++ A K+F E DV W +++ G+ Q
Sbjct: 261 GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQ 320
Query: 119 MGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
G E L F M + + D VT++ + A + L +SVH F G+D +
Sbjct: 321 SGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLC 380
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ N+ + Y K +K A +F + ++ ++SW++MVA D L+ + M+
Sbjct: 381 LANSLLHLYGKTGSIKNASNLFREMSDK--DIISWSTMVACYADNGAETDVLDLFNEMLD 438
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ + TVVS+L + C L +G +H ++YGF+++ +V L+ MY KC +
Sbjct: 439 KRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEK 498
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A LF+ + + ++W + SGYA G + E++ +F M ++G PD + ++ +++ +
Sbjct: 499 AVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISE 558
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G L+ + G ++N + +LI++Y+KC SI DA ++F + K VV+W+++
Sbjct: 559 LGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 618
Query: 418 IAGCALNGEFVEALDLFHQLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
IA +G+ EAL LF+Q+ D +PN VTF+++L AC+H+G +++G I++
Sbjct: 619 IAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEG--INMFDIMVN 676
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
P +HY+ M DLLGR G+L ALD + +MP+++ IWG LL AC+IH NI++GE
Sbjct: 677 KYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGE 736
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A LF L+P+ A Y+ ++N Y++ W +R ++K ++ K GQS+ + +
Sbjct: 737 VAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEV 796
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
+F A DR H ES+ Y +L L RE A+ ++
Sbjct: 797 RSFIAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQ 833
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 237/536 (44%), Gaps = 34/536 (6%)
Query: 39 LLLFRQMKQND---------IEPNNLTFPFIAKACAKLS-DLIYSQMIHGHIVKSPFV-- 86
L++F ++ +N +E NL + C+KLS ++SQ + +V F+
Sbjct: 116 LIIFTKIVENSELLKFHEWLMERRNLLVKLLETCCSKLSISQLHSQCLKAGLVHDSFIVT 175
Query: 87 -------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI-- 137
+ + A+K+F E R V WNA+L + G L LF M V
Sbjct: 176 KLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVS 235
Query: 138 ---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
+ D +V ++ + L L K +H F + +D D+ V + I Y KC +
Sbjct: 236 IEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMND 295
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSS 253
A VF +E VV W S+++G + +L F+ M+ + D T+VS+ S+
Sbjct: 296 AVKVF--MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASA 353
Query: 254 FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
GR VH G D + + N+L+ +Y K G I +A LF + D+ +SW
Sbjct: 354 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISW 413
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
+ M++ YA G + L LF M P+ VTV+S++ C LE G A +
Sbjct: 414 STMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVN 473
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
G + V AL+DMY KC S A +LF +P+K V++W + +G A NG E++ +
Sbjct: 474 YGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWV 533
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADL 493
F ++ RP+ + + +L + G L++ + + G N + + + ++
Sbjct: 534 FRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIG--ASLIEV 590
Query: 494 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
+ +++A + M K D W +++ A H GE +++ HS
Sbjct: 591 YAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQ---GEEALKLFYQMANHS 642
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 326/618 (52%), Gaps = 22/618 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I E + L+ QM ++ P++ TF I K+C+ L D ++ +H H++
Sbjct: 167 WTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVL 226
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F K ++ A +F + ++D+ SW +M+ GF+Q+G+ L
Sbjct: 227 KSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALC 286
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS--LLKSVHSFGIHIGVDADVSVCNTWISS 185
F M + V G +A +K L + +H I G+ +D+ +
Sbjct: 287 HFREMLSQSVYQPNEFVFGSAFSAC-SKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC L+ A VF IE+ +V+WN+++AG +S +F+ M + G +
Sbjct: 346 YAKCGFLESARTVFYHIEKP--DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDV 403
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
TV+SLL + P L G VHS+ + GF+LD+ V N+L+SMYSKC +++ A +F+ I
Sbjct: 404 TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDI 463
Query: 306 CDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
++ VSW +++ Q+ E LRL M A+ PD VT+ +++ GQ + E+G
Sbjct: 464 GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ GL ++ V NALI+MY+KCGS+ AR++F ++ ++SW+++I G A
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EA +LF + L ++PN +TF+ +L AC+H G +E+G + +D IS P
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRIS--PTK 641
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+H SCM DLL R G L A DF++ MP D +W TLL ACK+H N+E+G+ A + K
Sbjct: 642 EHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLK 701
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
++P ++A V + N +A G W A +R+ M+R V K PGQS I K F AED
Sbjct: 702 IDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDN 761
Query: 605 YHAESELTYPVLDCLALH 622
H E Y +L+ L L
Sbjct: 762 LHPERGKIYTMLEELMLQ 779
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 213/454 (46%), Gaps = 26/454 (5%)
Query: 34 EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK----------- 82
EA K +F++ + ++ ++T+ + AC+ L L + + IH H++
Sbjct: 80 EALKAFDIFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQN 137
Query: 83 ---SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
S + KC L A +FD M +++V SW +M+ G+++ G +N + L+ M G
Sbjct: 138 HILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIP 197
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D T + ++ L + +H+ + AD+ N IS Y K + A VF
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF 257
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM----YNGFRLDVTTVVSLLSSFV 255
I ++ ++SW SM+AG + ++L +R M+ Y + S S +
Sbjct: 258 SRI--IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLL 315
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
P+ GR +H I +G D+ +L MY+KCG ++SAR +F I V+W A
Sbjct: 316 EPDC---GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNA 372
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+I+G+A + E+ F M G +P+ VTVLS++ C + L G +Y G
Sbjct: 373 IIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMG 432
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLF 434
++ VCN+L+ MYSKC ++ DA ++F + K +VSW T++ C + E L L
Sbjct: 433 FNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLT 492
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ ++P+ VT VL + E G I
Sbjct: 493 KLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQI 526
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 181/386 (46%), Gaps = 6/386 (1%)
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
VT L A + L + +H + D+ + N +S Y KC LK A +F
Sbjct: 99 VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDS 158
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ L+ VVSW SM++G + + D+++ Y M+ +G D T S++ S +
Sbjct: 159 MP--LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFK 216
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
R +H+H + F D+ N LISMY+K + A +F I + +SW +MI+G++
Sbjct: 217 LARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFS 276
Query: 322 QKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q G EAL F M + P+ S S C + + G+ GL ++
Sbjct: 277 QLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL 336
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+L DMY+KCG + AR +FY + + +V+W +IAG A E+ F Q+
Sbjct: 337 FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHT 396
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
L PN VT L++L AC+ L G I + Y K + +N ++ + + + + L
Sbjct: 397 GLVPNDVTVLSLLCACSEPVMLNHG--IQVHSYIVK-MGFNLDIPVCNSLLSMYSKCSNL 453
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCAC 526
+AL + + K+D W TLL AC
Sbjct: 454 NDALQVFEDIGNKADIVSWNTLLTAC 479
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I + I WN+ + + +N+A + L L + M + I+P+++T + + +++
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522
Query: 73 SQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
IH I+KS + KC L+CA K+FD + D+ SW++++VG+AQ
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQ 582
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVS 177
G + LF MR +G++ + +T +G+ A H + LK + +
Sbjct: 583 AGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
C+ + A+ L +AE F + VV W +++A C
Sbjct: 643 HCSCMVDLLARAGCLDVAE-DFIRQMPFVPDVVVWKTLLAAC 683
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 318/612 (51%), Gaps = 24/612 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
++++R A ++++ L F M + P TF + K CA +DL + +H +
Sbjct: 193 HARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLA 252
Query: 82 K---SP-----------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
SP + KC R A ++FD M RD +WNA++ G+A+ G E +
Sbjct: 253 ARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVG 312
Query: 128 LFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ M+ G + D VT++ + A A+ L + VH+F + G D V+V + Y
Sbjct: 313 MVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVY 372
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC + A VF G+++R VSWN+M+ G ++L ++ M+ G +DVT
Sbjct: 373 CKCGAVDSARKVFDGMQDR--NSVSWNAMIKGYAENGDATEALALFKRMVGEG--VDVTD 428
Query: 247 VVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
V L + C E L +GR VH + G + +V+V+N LI+MY KC D A +FD
Sbjct: 429 VSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDE 488
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +TRVSW AMI G Q G ++A+RLF M+ PD T++S+I
Sbjct: 489 LGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQA 548
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+W Y+ L +V V ALIDMY+KCG + AR LF + ++ V++W MI G +
Sbjct: 549 RWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSH 608
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G A++LF ++ PN TFL+VL AC+H G +++G +D G+ P +
Sbjct: 609 GSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGL--EPGM 666
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY M DLLGR GKL EA F+Q MP++ ++G +L ACK+H N+E+ E A +F+
Sbjct: 667 EHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFE 726
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP +V +AN YA W VA +RT M++ ++K PG S+ + + TF +
Sbjct: 727 LEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGST 786
Query: 605 YHAESELTYPVL 616
H +++ Y L
Sbjct: 787 NHQQAKDIYARL 798
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 210/631 (33%), Positives = 334/631 (52%), Gaps = 28/631 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I+ WN + + L LF ++ ++P++ T+P + KAC L + +MIH
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIH 129
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
++K+ + KC+ + A +F+EM +DVA WN ++ + Q G +
Sbjct: 130 TCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ L F MR G + + VT+ + L+ +H I+ G D + + +
Sbjct: 190 DALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALV 249
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD--DSLNFYRHMMYNGFR 241
Y KC L+MA +F + ++ TVV+WNSM++G YG K D + ++ M G +
Sbjct: 250 DMYGKCGHLEMAIEIFEQMPKK--TVVAWNSMISG--YGLKGDIISCIQLFKRMYNEGVK 305
Query: 242 LDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+TT+ SL+ VC + L++G+ VH + I DV V ++L+ +Y KCG ++ A
Sbjct: 306 PTLTTLSSLI--MVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAE 363
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F I VSW MISGY +G L EAL LF M + D +T S+++ C Q
Sbjct: 364 KIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLA 423
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
ALE GK N L +N +V AL+DMY+KCG++ +A +F LP++ +VSWT+MI
Sbjct: 424 ALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+G AL+LF ++++ +++P+RV FLA+L AC H G +++G + GI
Sbjct: 484 AYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGII 543
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHLNIEIGEYV 538
P ++HYSC+ DLLGR G+L EA + +Q P I+ D + TL AC++H NI++G +
Sbjct: 544 --PRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEI 601
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +P ++ Y+ ++N YA +WD V +R+ MK +KK PG S IN K
Sbjct: 602 ARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILP 661
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAYS 629
F ED H EL + L L+ H +E+ S
Sbjct: 662 FFVEDNSHLHLELVFKCLSYLSDHMEDESKS 692
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 188/385 (48%), Gaps = 6/385 (1%)
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D ++ L +A +++K L K +H + +G+ D+ +C T I+ Y C A+ VF
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPE 258
+E + WN ++AG T + ++L + ++ Y + D T S+ +
Sbjct: 62 DNMENPCEISL-WNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
V G+++H+ I G +D+ V ++L+ MY KC + A LF+ + ++ W +IS
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y Q G+ +AL F M G P+ VT+ + IS C + L G + G
Sbjct: 181 CYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ + +AL+DMY KCG + A E+F +P+K VV+W +MI+G L G+ + + LF ++
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMY 300
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
++P T +++ C+ + L +G + ++ P++ S + DL + G
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR---IQPDVFVNSSLMDLYFKCG 357
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLL 523
K++ A + +P KS W ++
Sbjct: 358 KVELAEKIFKLIP-KSKVVSWNVMI 381
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 138/286 (48%), Gaps = 10/286 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D ++ LL + + ++L QG+L+H + G D+ + TLI+ Y C D A+ +
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60
Query: 302 FDGICDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSG 359
FD + + +S W +++GY + EAL LF + L PD T S+ CG
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
LGK GL +++V ++L+ MY KC + A LF +PEK V W T+I+
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+G F +AL+ F + PN VT + +C L +G I ++ I+
Sbjct: 181 CYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIH-----EELIN 235
Query: 480 YNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
LD + S + D+ G+ G L+ A++ + MP K+ W +++
Sbjct: 236 SGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVA-WNSMI 280
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 62/368 (16%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS I K + + LF++M ++P T + C++ + L+ + +H
Sbjct: 272 TVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVH 331
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+ +++ + KC +++ A KIF + V SWN M+ G+ G L
Sbjct: 332 GYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLF 391
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L LF MR +++D +T + A L K +H+ I +D + V +
Sbjct: 392 EALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALL 451
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA-----GCTYGDKFDDSLNFYRHMMYN 238
YAKC + A VF + + R +VSW SM+ G YG +L + M+ +
Sbjct: 452 DMYAKCGAVDEAFSVFKCLPK--RDLVSWTSMITAYGSHGHAYG-----ALELFAEMLQS 504
Query: 239 GFRLDVTTVVSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ D +++LS+ C A LV G +Y N +I++Y
Sbjct: 505 NVKPDRVAFLAILSA--CGHAGLVD------EGCYY--------FNQMINVY-------- 540
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS-MISGCG 356
GI R ++ +I + G L EA + ++ E+ D V +LS + S C
Sbjct: 541 ------GIIPRVE-HYSCLIDLLGRAGRLHEAYEI---LQQNPEIRDDVELLSTLFSACR 590
Query: 357 QSGALELG 364
++LG
Sbjct: 591 LHRNIDLG 598
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L ++ ++ S + WN I V + + + L LF +M+++ +E + +TF + AC+
Sbjct: 361 LAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACS 420
Query: 66 KLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
+L+ L + IH I++ + KC +D A+ +F + RD+ SW +
Sbjct: 421 QLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTS 480
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
M+ + G L LF M ++ D V + + A HA
Sbjct: 481 MITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHA 523
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 321/629 (51%), Gaps = 20/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I V A L LF M ++ + +AC +L D+ + +H H +
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 179
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + K +D + +F+ + +D+ SW +++ GFAQ GF L+
Sbjct: 180 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M + G G A A + +H I +D D+ V + Y
Sbjct: 240 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 299
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+C +L A + F IE +VSWNS+V + ++L + M +G R D T
Sbjct: 300 ARCKNLDSARVAFYRIEAP--DLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGIT 357
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V LL + V +AL GRL+HS+ + G D DVSV N+L+SMY++C D+ SA +F I
Sbjct: 358 VRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK 417
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D+ V+W ++++ AQ +E L+LF + + D +++ +++S + G E+ K
Sbjct: 418 DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 477
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNG 425
YA GL D+ M+ N LID Y+KCGS+ DA LF + + V SW+++I G A G
Sbjct: 478 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 537
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EA DLF ++ L +RPN VTF+ VL AC+ GF+ +G I + GI P +
Sbjct: 538 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIV--PTRE 595
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H SC+ DLL R GKL EA +F+ MP + D +W TLL A K+H ++E+G+ A + +
Sbjct: 596 HCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNI 655
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P +A YV + N YA G W+ A ++ M+ + VKK PG+S + G+ F EDR
Sbjct: 656 DPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRS 715
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
H ESE Y +L+ + + + Y W
Sbjct: 716 HPESEEIYAMLELIGMEMIKAGYVPKHSW 744
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 228/496 (45%), Gaps = 41/496 (8%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSP---------------------FVKCDRLDCAY 95
+ + AC++L L + +H H+V S + +C D A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++FDEM R+ SW +++ Q G + L LF +M G AD + +A
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ + VH+ + +D+ V N ++ Y+K + ++F I++ + ++SW S+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD--KDLISWGSI 224
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ---GRLVHSHGIH 272
+AG ++L +R M+ G S+F A+ G +H I
Sbjct: 225 IAGFAQQGFEMEALQVFREMIVEGSHH--PNEFHFGSAFRACGAVGSWEYGEQIHGLSIK 282
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
Y D D+ V +L MY++C ++DSARV F I VSW ++++ Y+ +G L EAL L
Sbjct: 283 YRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVL 342
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M +G PD +TV ++ C AL G+ +Y GL +V VCN+L+ MY++
Sbjct: 343 FSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYAR 402
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
C + A ++F+ + ++ VV+W +++ CA + E L LF L + + +R++ V
Sbjct: 403 CSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNV 462
Query: 453 LQACTHTGFLE-----KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
L A G+ E +A DD+ +S N +D Y+ + G L +A+
Sbjct: 463 LSASAELGYFEMVKQVHAYAFKAGLVDDRMLS-NTLIDTYA-------KCGSLDDAMRLF 514
Query: 508 QSMPIKSDAGIWGTLL 523
+ M D W +L+
Sbjct: 515 EIMGNNRDVFSWSSLI 530
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 321/629 (51%), Gaps = 20/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I V A L LF M ++ + +AC +L D+ + +H H +
Sbjct: 103 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 162
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + K +D + +F+ + +D+ SW +++ GFAQ GF L+
Sbjct: 163 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 222
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M + G G A A + +H I +D D+ V + Y
Sbjct: 223 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 282
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+C +L A + F IE +VSWNS+V + ++L + M +G R D T
Sbjct: 283 ARCKNLDSARVAFYRIEAP--DLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGIT 340
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V LL + V +AL GRL+HS+ + G D DVSV N+L+SMY++C D+ SA +F I
Sbjct: 341 VRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK 400
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D+ V+W ++++ AQ +E L+LF + + D +++ +++S + G E+ K
Sbjct: 401 DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 460
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNG 425
YA GL D+ M+ N LID Y+KCGS+ DA LF + + V SW+++I G A G
Sbjct: 461 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 520
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EA DLF ++ L +RPN VTF+ VL AC+ GF+ +G I + GI P +
Sbjct: 521 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIV--PTRE 578
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H SC+ DLL R GKL EA +F+ MP + D +W TLL A K+H ++E+G+ A + +
Sbjct: 579 HCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNI 638
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P +A YV + N YA G W+ A ++ M+ + VKK PG+S + G+ F EDR
Sbjct: 639 DPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRS 698
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
H ESE Y +L+ + + + Y W
Sbjct: 699 HPESEEIYAMLELIGMEMIKAGYVPKHSW 727
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 220/479 (45%), Gaps = 24/479 (5%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDE----MAVRDVASWNAM 112
+ + AC++L L + +H H+V S D + M R+ SW ++
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRNPVSWASV 106
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
+ Q G + L LF +M G AD + +A + + VH+ +
Sbjct: 107 IAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSER 166
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
+D+ V N ++ Y+K + ++F I++ + ++SW S++AG ++L +
Sbjct: 167 GSDLIVQNALVTMYSKNGLVDDGFMLFERIKD--KDLISWGSIIAGFAQQGFEMEALQVF 224
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQ---GRLVHSHGIHYGFDLDVSVINTLISMY 289
R M+ G S+F A+ G +H I Y D D+ V +L MY
Sbjct: 225 REMIVEGSHH--PNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 282
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
++C ++DSARV F I VSW ++++ Y+ +G L EAL LF M +G PD +TV
Sbjct: 283 ARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 342
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
++ C AL G+ +Y GL +V VCN+L+ MY++C + A ++F+ + ++
Sbjct: 343 GLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 402
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE-----K 464
VV+W +++ CA + E L LF L + + +R++ VL A G+ E
Sbjct: 403 DVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVH 462
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+A DD+ +S N +D Y+ + G L +A+ + M D W +L+
Sbjct: 463 AYAFKAGLVDDRMLS-NTLIDTYA-------KCGSLDDAMRLFEIMGNNRDVFSWSSLI 513
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/611 (33%), Positives = 306/611 (50%), Gaps = 24/611 (3%)
Query: 35 AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------- 86
K + LF++M + +EP++ T + AC+ L Q +H + K F
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 87 ------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
KC ++ A F E V +V WN MLV + + L N R+F M++ I +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA---EL 197
T + + I L L + +HS I + VC+ I YAK L A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F G + VVSW +M+AG T + D +L +R M+ G R D + + +S+
Sbjct: 550 RFAG-----KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL +G+ +H+ GF D+ N L+++YS+CG I+ + + F+ ++W A++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SG+ Q G+ +EALR+F M G + T S + ++ ++ GK G
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
VCNALI MY+KCGSI DA + F + K VSW +I + +G EALD F Q+
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++RPN VT + VL AC+H G ++KG A + G+S PE HY C+ D+L R
Sbjct: 785 IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE--HYVCVVDMLTRA 842
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G L A +F+Q MPIK DA +W TLL AC +H N+EIGE+ A+ L +LEP +A YV ++
Sbjct: 843 GLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 902
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N YA+ +WD R MK VKK PGQS + +F D+ H ++ +
Sbjct: 903 NLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ 962
Query: 618 CLALHSREEAY 628
L + E Y
Sbjct: 963 DLTKRASEIGY 973
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 247/514 (48%), Gaps = 33/514 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS---DLIYSQ 74
TI WN I+E ++N + LF +M ++ PN TF + +AC S D++ +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--E 207
Query: 75 MIHGHI----VKSPFVKCDRL----------DCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH I ++ V C+ L D A ++FD + ++D +SW AM+ G ++
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+RLF +M ++GI + A + L + + +H + +G +D VCN
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG---CTYGDKFDDSLNFYRHMMY 237
+S Y +L AE +F + + R V++N+++ G C YG+K ++ ++ M
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEK---AMELFKRMHL 382
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+G D T+ SL+ + L +G+ +H++ GF + + L+++Y+KC DI++
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A F V W M+ Y DL + R+F M+ +P+ T S++ C +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G LELG+ + + N VC+ LIDMY+K G + A ++ K VVSWTTM
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG +AL F Q+++ +R + V + AC L++G I +
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI----HAQAC 618
Query: 478 IS-YNPELDHYSCMADLLGRKGKLKEA-LDFVQS 509
+S ++ +L + + L R GK++E+ L F Q+
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 225/502 (44%), Gaps = 32/502 (6%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLS-DLIYSQMIHGHIVKSPFVKCDRLDC---------- 93
++ I PN+ T ++ + C K + L + +H I+K + D C
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK---LGLDSNGCLSEKLFDFYL 131
Query: 94 -------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
A+K+FDEM R + +WN M+ A + V LF M + + T G
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 147 LTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ +A +++ +H+ ++ G+ VCN I Y++ + +A VF G+ R
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--R 249
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
L+ SW +M++G + + +++ + M G S+LS+ E+L G
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H + GF D V N L+S+Y G++ SA +F + R V++ +I+G +Q G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
++A+ LF M G PD T+ S++ C G L G+ Y G N + A
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+++Y+KC I A + F + VV W M+ L + + +F Q+ ++ PN
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEA 503
+ T+ ++L+ C G LE G Q + I N +L+ Y C + D+ + GKL A
Sbjct: 490 QYTYPSILKTCIRLGDLELGE-----QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 504 LDFVQSMPIKSDAGIWGTLLCA 525
D + K D W T++
Sbjct: 545 WDILIRFAGK-DVVSWTTMIAG 565
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N K L FRQM I + + ACA L L Q IH
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F +C +++ +Y F++ D +WNA++ GF Q G E LR
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M GI + T +AA ++ K VH+ G D++ VCN IS YA
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + AE F +E + VSWN+++ + ++L+ + M+++ R + T+
Sbjct: 739 KCGSISDAEKQF--LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 248 VSLLSS 253
V +LS+
Sbjct: 797 VGVLSA 802
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 218/678 (32%), Positives = 338/678 (49%), Gaps = 82/678 (12%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
PP +Y WNS IR + A+K L LF M P+N TFPF+ KAC
Sbjct: 85 FPPSDAGVY------HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACG 138
Query: 66 KLSDLIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
++S + + H G+ + + + +C L A K+FDEM+V DV SWN+
Sbjct: 139 EISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNS 198
Query: 112 MLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ +A++G + L +F M G + D +T++ + SL K +H F +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
+ ++ V N + YAKC + A VF + ++ VVSWN+MVAG + +F+D++
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS--VKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 231 FY-----------------------------------RHMMYNGFRLDVTTVVSLLSSFV 255
+ R M+ +G + + T++S+LS
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVS-------VINTLISMYSKCGDIDSARVLFDGICDR 308
AL+ G+ +H + I Y DL + VIN LI MY+KC +D+AR +FD + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 309 TR--VSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG 364
R V+WT MI GY+Q GD ++AL L M E P+ T+ + C AL +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 365 KWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
K YA + V N LIDMY+KCGSI DAR +F + K V+WT+++ G +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-----GI 478
+G EAL +F ++ + + + VT L VL AC+H+G +++G ++Y ++ G+
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG-----MEYFNRMKTVFGV 611
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
S PE HY+C+ DLLGR G+L AL ++ MP++ +W L C+IH +E+GEY
Sbjct: 612 SPGPE--HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A + +L + Y ++N YA GRW V IR++M+ VKK PG S T T
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729
Query: 599 FTAEDRYHAESELTYPVL 616
F D+ H ++ Y VL
Sbjct: 730 FFVGDKTHPHAKEIYQVL 747
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 158/323 (48%), Gaps = 12/323 (3%)
Query: 147 LTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+T IH K +S +K +H + G+ +++ + IS+Y L A +
Sbjct: 30 ITPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPS 88
Query: 206 LRTVVSWNSMVAGCTYGDK--FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
V WNS++ +YGD + L + M + D T + + ++ G
Sbjct: 89 DAGVYHWNSLIR--SYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCG 146
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
H+ + GF +V V N L++MYS+C + AR +FD + VSW ++I YA+
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 324 GDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G AL +F M G PD +T+++++ C G LGK +A + + N+ V
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N L+DMY+KCG + +A +F + K VVSW M+AG + G F +A+ LF ++ E +
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
+ + VT+ A + +G+ ++G
Sbjct: 327 KMDVVTWSAAI-----SGYAQRG 344
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/611 (33%), Positives = 306/611 (50%), Gaps = 24/611 (3%)
Query: 35 AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------- 86
K + LF++M + +EP++ T + AC+ L Q +H + K F
Sbjct: 330 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 389
Query: 87 ------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
KC ++ A F E V +V WN MLV + + L N R+F M++ I +
Sbjct: 390 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 449
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA---EL 197
T + + I L L + +HS I + VC+ I YAK L A +
Sbjct: 450 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 509
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F G + VVSW +M+AG T + D +L +R M+ G R D + + +S+
Sbjct: 510 RFAG-----KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 564
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL +G+ +H+ GF D+ N L+++YS+CG I+ + + F+ ++W A++
Sbjct: 565 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 624
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SG+ Q G+ +EALR+F M G + T S + ++ ++ GK G
Sbjct: 625 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 684
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
VCNALI MY+KCGSI DA + F + K VSW +I + +G EALD F Q+
Sbjct: 685 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 744
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++RPN VT + VL AC+H G ++KG A + G+S PE HY C+ D+L R
Sbjct: 745 IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE--HYVCVVDMLTRA 802
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G L A +F+Q MPIK DA +W TLL AC +H N+EIGE+ A+ L +LEP +A YV ++
Sbjct: 803 GLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 862
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N YA+ +WD R MK VKK PGQS + +F D+ H ++ +
Sbjct: 863 NLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ 922
Query: 618 CLALHSREEAY 628
L + E Y
Sbjct: 923 DLTKRASEIGY 933
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 247/514 (48%), Gaps = 33/514 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS---DLIYSQ 74
TI WN I+E ++N + LF +M ++ PN TF + +AC S D++ +
Sbjct: 110 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--E 167
Query: 75 MIHGHI----VKSPFVKCDRL----------DCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH I ++ V C+ L D A ++FD + ++D +SW AM+ G ++
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 227
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+RLF +M ++GI + A + L + + +H + +G +D VCN
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 287
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG---CTYGDKFDDSLNFYRHMMY 237
+S Y +L AE +F + + R V++N+++ G C YG+K ++ ++ M
Sbjct: 288 ALVSLYFHLGNLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEK---AMELFKRMHL 342
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+G D T+ SL+ + L +G+ +H++ GF + + L+++Y+KC DI++
Sbjct: 343 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 402
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A F V W M+ Y DL + R+F M+ +P+ T S++ C +
Sbjct: 403 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 462
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G LELG+ + + N VC+ LIDMY+K G + A ++ K VVSWTTM
Sbjct: 463 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 522
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG +AL F Q+++ +R + V + AC L++G I +
Sbjct: 523 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI----HAQAC 578
Query: 478 IS-YNPELDHYSCMADLLGRKGKLKEA-LDFVQS 509
+S ++ +L + + L R GK++E+ L F Q+
Sbjct: 579 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 612
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 223/497 (44%), Gaps = 32/497 (6%)
Query: 50 IEPNNLTFPFIAKACAKLS-DLIYSQMIHGHIVKSPFVKCDRLDC--------------- 93
I PN+ T ++ + C K + L + +H I+K + D C
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK---LGLDSNGCLSEKLFDFYLFKGDL 96
Query: 94 --AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
A+K+FDEM R + +WN M+ A + V LF M + + T G+ +A
Sbjct: 97 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 156
Query: 152 IHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+++ +H+ ++ G+ VCN I Y++ + +A VF G+ RL+
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--RLKDHS 214
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW +M++G + + +++ + M G S+LS+ E+L G +H
Sbjct: 215 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 274
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ GF D V N L+S+Y G++ SA +F + R V++ +I+G +Q G ++A+
Sbjct: 275 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 334
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M G PD T+ S++ C G L G+ Y G N + AL+++Y
Sbjct: 335 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 394
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
+KC I A + F + VV W M+ L + + +F Q+ ++ PN+ T+
Sbjct: 395 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 454
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQ 508
++L+ C G LE G Q + I N +L+ Y C + D+ + GKL A D +
Sbjct: 455 SILKTCIRLGDLELGE-----QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 509
Query: 509 SMPIKSDAGIWGTLLCA 525
K D W T++
Sbjct: 510 RFAGK-DVVSWTTMIAG 525
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N K L FRQM I + + ACA L L Q IH
Sbjct: 519 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 578
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F +C +++ +Y F++ D +WNA++ GF Q G E LR
Sbjct: 579 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 638
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M GI + T +AA ++ K VH+ G D++ VCN IS YA
Sbjct: 639 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 698
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + AE F +E + VSWN+++ + ++L+ + M+++ R + T+
Sbjct: 699 KCGSISDAEKQF--LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 756
Query: 248 VSLLSS 253
V +LS+
Sbjct: 757 VGVLSA 762
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 203/623 (32%), Positives = 326/623 (52%), Gaps = 26/623 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ + N + L LF Q+ N + P+ T+P + KAC L +IY + IH
Sbjct: 70 VSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIH 129
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
H++K+ + KCD+ A K+FDE RDV WNA++ + + G E
Sbjct: 130 NHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAE 189
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L+ F M+ +G + + VT + + +L K VH I + D V + +
Sbjct: 190 MALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALV 249
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y KC L+MA+ VF I + ++WN+M+ G + + M G +
Sbjct: 250 DMYGKCGCLEMAKEVFEKIPRK--NAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPT 307
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ T+ S++ + L G+ +H + + D+D+ + +LI Y KCG + SA +F
Sbjct: 308 LMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFR 367
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I VSW MISG+ G+ +AL ++ M+ PD +T S +S C Q AL+
Sbjct: 368 TISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDK 427
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ + L+ N +V AL+DMY+KCG + +AR+LF+ LP++ +VSWT+MI
Sbjct: 428 GRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGS 487
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI---SIIQYDDKGISY 480
+G+ EAL LF ++ +L++R + VTFLAVL AC+H G +++G+ ++QYD K
Sbjct: 488 HGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIK---- 543
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQ-SMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P ++HYSC+ DLLGR G+L EA + +Q S +SD G+ TL AC +H N +G +
Sbjct: 544 -PGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIG 602
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L +++P + Y+ ++N YA +WD V +R MK +KK PG S IN + F
Sbjct: 603 KMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPF 662
Query: 600 TAEDRYHAESELTYPVLDCLALH 622
AED+ + ++ Y L+ L H
Sbjct: 663 FAEDKSNPLADGVYECLNILGCH 685
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 207/427 (48%), Gaps = 9/427 (2%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSV 163
DV+ WNA+L + L+LF + ++ DF T + +A + + +
Sbjct: 69 DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRI 128
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H+ + G+ DV V ++ ++ YAKCD A +F + R V WN++++ C + D
Sbjct: 129 HNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQ--RDVGCWNAVIS-CYFKD 185
Query: 224 -KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
K + +L + M GF + T ++SS L +G+ VH I LD V+
Sbjct: 186 GKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVL 245
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+ L+ MY KCG ++ A+ +F+ I + ++W AMI+GY+ KGD + L M G
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTK 305
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P L+T+ S+I +S L GK+ Y + ++ + +LID Y KCG + A +
Sbjct: 306 PTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETI 365
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + + VVSW MI+G + G ++AL ++ + E ++P+ +TF + L AC+ L
Sbjct: 366 FRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAAL 425
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
+KG + + K + N + + D+ + G + EA +P K D W ++
Sbjct: 426 DKGRELHYCIINHK-LEANEIV--MGALLDMYAKCGDVDEARKLFHQLP-KRDLVSWTSM 481
Query: 523 LCACKIH 529
+ A H
Sbjct: 482 IFAYGSH 488
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 161/331 (48%), Gaps = 10/331 (3%)
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D+VT++ + +K L K +H G +++ + + I Y C D AELVF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 200 ----CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSF 254
C ++ L WN++++ T +F ++L + + N + R D T +L +
Sbjct: 62 QTNDCPLDVSL-----WNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKAC 116
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
++ GR +H+H + G DV V ++L++MY+KC A LFD R W
Sbjct: 117 GGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWN 176
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
A+IS Y + G + AL+ F M+ G P+ VT ++S C + LE GK
Sbjct: 177 AVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIER 236
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
+ + V +AL+DMY KCG + A+E+F +P K ++W MI G +L G+ ++L
Sbjct: 237 RILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELL 296
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
++ + +P +T +++ A + + L G
Sbjct: 297 MRMNDEGTKPTLMTLTSIIYASSRSVQLRHG 327
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 10/286 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D T++S L + + L QG+L+H GF ++ + +LI Y C D SA ++
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 302 FD-GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSG 359
F C W A++S Y EAL+LF + + PD T ++ CG G
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+ G+ N+ GL +V V ++L++MY+KC DA +LF P++ V W +I+
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+G+ AL F ++ EL PN VTF V+ +CT LE+G + + I
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVH-----RELIE 235
Query: 480 YNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
LD + S + D+ G+ G L+ A + + +P + +A W ++
Sbjct: 236 RRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMI 280
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 13 IYRSSTINQ---WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
I+R+ + N+ WN I V + L ++ MK++ ++P+ LTF AC++L+
Sbjct: 365 IFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAA 424
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +H I+ + KC +D A K+F ++ RD+ SW +M+
Sbjct: 425 LDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFA 484
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ G LRLF M+ + ++AD VT + + A HA
Sbjct: 485 YGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHA 523
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 316/618 (51%), Gaps = 24/618 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I+ +N+ IR + A L ++ +PNN TFPF+ KAC+ L DL ++ +H
Sbjct: 94 IHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHC 153
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
H ++ + KC A +F M RDV +WNAML G+A G +
Sbjct: 154 HAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSD 213
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD----VSVCN 180
+ M+ V L A H LS ++VH++ + D V V
Sbjct: 214 TIACLLLMQDDHAPNASTLVALLPLLAQHGA-LSQGRAVHAYSVRACSLHDHKDGVLVGT 272
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ YAKC L A VF + +R V+W+++V G + ++ + ++ M+ G
Sbjct: 273 ALLDMYAKCGHLVYASRVFEAMA--VRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGL 330
Query: 241 -RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
L T+V S L + L G+ +H+ G D++ N+L+SMY+K G ID A
Sbjct: 331 CFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQAT 390
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LFD + + VS++A++SGY Q G DEA R+F M+A PD+ T++S+I C
Sbjct: 391 TLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLA 450
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL+ GK G+ +CNALIDMY+KCG I +R++F +P + +VSW TMIA
Sbjct: 451 ALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIA 510
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G ++G EA LF + P+ VTF+ ++ AC+H+G + +G + GI+
Sbjct: 511 GYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGIT 570
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P ++HY M DLL R G L EA F+Q MP+K+D +WG LL AC++H NI++G+ V+
Sbjct: 571 --PRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVS 628
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
+ +L P +V ++N ++ GR+D A +R + K KK PG S ING F
Sbjct: 629 SMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAF 688
Query: 600 TAEDRYHAESELTYPVLD 617
DR HA+S Y LD
Sbjct: 689 IGGDRSHAQSSEIYQELD 706
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 208/449 (46%), Gaps = 16/449 (3%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C L A +FD++ + +NA++ ++ G + R Q + T +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+A L ++VH G+ AD+ V + YAKC + A VF + R
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPA--R 193
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VV+WN+M+AG K+ D++ +M + + +T+V+LL AL QGR VH
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVH 252
Query: 268 SHGIH----YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
++ + + V V L+ MY+KCG + A +F+ + R V+W+A++ G+
Sbjct: 253 AYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312
Query: 324 GDLDEALRLFFAMEAAGE-LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G + EA LF M A G +V S + C L LGK GL ++
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+L+ MY+K G I A LF + K VS++ +++G NG+ EA +F ++ ++
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWA--ISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
+P+ T ++++ AC+H L+ G S+I +GI+ E + + D+ + G++
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIV---RGIA--SETSICNALIDMYAKCGRI 487
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ MP + D W T++ IH
Sbjct: 488 DLSRQIFDVMPAR-DIVSWNTMIAGYGIH 515
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 10/267 (3%)
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CGD+ AR LFD I + A+I Y+ +G P+ T +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C L + +A GL ++ V AL+D+Y+KC S A +F +P + V
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
V+W M+AG AL+G++ + + LM+ D PN T +A+L G L +G A+
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVH-- 252
Query: 472 QYDDKGISYNPELDHY---SCMADLLGRKGKLKEALDFVQSMPIKSD----AGIWGTLLC 524
Y + S + D + + D+ + G L A ++M ++++ A + G +LC
Sbjct: 253 AYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAA 551
+ + +A L L P S A
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVA 339
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/625 (31%), Positives = 328/625 (52%), Gaps = 23/625 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N IR + + L +R M P+ TFP + K CA+ L + H ++K
Sbjct: 89 NVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIK 148
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ + K + A ++FD M RD+ SWN M+ G+ G L
Sbjct: 149 LGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALAC 208
Query: 129 FYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + + D V V+ A L+L + +H + I G++ DV V + + Y
Sbjct: 209 FREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYC 268
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ AE VF + LRTVV+WN M+ G ++ D+ + + M +GF+++V T
Sbjct: 269 KCGNVFFAENVFAKMP--LRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTA 326
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL++ E+ + GR VH++ + F V + L+ MY K G ++S+ +F I D
Sbjct: 327 INLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITD 386
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+T VSW MI+ Y EA+ LF + PD T+ +++ G++ K
Sbjct: 387 KTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQM 446
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+Y G D+ ++ NA++ MY++CG+I +RE+F +P K V+SW T+I G A++G+
Sbjct: 447 HSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQG 506
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELD 485
AL++F ++ + PN TF++VL AC+ +G +GW +++ Y P+++
Sbjct: 507 KIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWK----EFNSMQQEYGMIPQIE 562
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY CM DLLGR G+L+E L F+++MPI + IWG+LL A + +I+I EY A +F+L
Sbjct: 563 HYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQL 622
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
E ++ YV +++ YA GRW+ V IR++MK +++ +SL +N K C+F D
Sbjct: 623 EHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMS 682
Query: 606 HAESELTYPVLDCLALHSREEAYSS 630
H +SE + D L+ + E+ SS
Sbjct: 683 HPQSEKIHEFSDILSRNIGEDLDSS 707
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+LI + G +D A F G+ MI G+A +AL + AM AG
Sbjct: 58 KSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGAR 117
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
PD T ++ C ++GAL G+ GL +V N+L+ +Y+K G +GDA +
Sbjct: 118 PDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERV 177
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME-LDLRPNRVTFLAVLQACTHTGF 461
F +P + +VSW TM+ G NG AL F ++ + L + + V +A L AC
Sbjct: 178 FDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESA 237
Query: 462 LEKGWAI 468
L G I
Sbjct: 238 LALGREI 244
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 207/633 (32%), Positives = 327/633 (51%), Gaps = 37/633 (5%)
Query: 16 SSTINQWNSQIR--EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
S + +N IR + + A L L+R+M ++ + PNN TFPF KAC+ L+D
Sbjct: 85 SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCG 144
Query: 74 QMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH H + + +VKC L A IF M RD+ +WNAML G+A
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 120 GFLENVLR--LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-- 175
G + + L M++ ++ + T++ L L+ SVH++ I + ++
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRN 264
Query: 176 --------VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
V + + YAKC L A VF + R V+W++++ G +
Sbjct: 265 SKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--NEVTWSALIGGFVLCSRMTQ 322
Query: 228 SLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+ ++ M+ G L T++ S L + + L G +H+ G D++ N+L+
Sbjct: 323 AFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLL 382
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
SMY+K G ID A LFD + + VS++A++SGY Q G +EA +F M+A PD
Sbjct: 383 SMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAA 442
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++S+I C AL+ G+ GL +CNALIDMY+KCG I +R++F +
Sbjct: 443 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 502
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG- 465
P + +VSW TMIAG ++G EA LF ++ L P+ VTF+ +L AC+H+G + +G
Sbjct: 503 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562
Query: 466 -WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
W ++++ G P ++HY CM DLL R G L EA +F+QSMP+++D +W LL
Sbjct: 563 HW-FHVMRH---GYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 618
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
AC+++ NI++G+ V+ + +L P +V ++N Y+ GR+D A +R + K KK
Sbjct: 619 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKS 678
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
PG S ING F D+ H +S Y LD
Sbjct: 679 PGCSWIEINGSLHAFVGGDQSHPQSPEIYRELD 711
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 295/535 (55%), Gaps = 5/535 (0%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A K+FDE DV WNA++ +++ + + ++ MR G+ D T + +A
Sbjct: 107 ARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE 166
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
L +H I G +DV V N ++ YAKC + +A++VF G+ R T+VSW
Sbjct: 167 LLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHR--TIVSWT 224
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
S+++G K ++L + M NG + D +VS+L ++ + L QGR +H I
Sbjct: 225 SIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKM 284
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G + + +++ +L + Y+KCG + A+ FD + + W AMISGYA+ G +EA+ LF
Sbjct: 285 GLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLF 344
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M + PD VTV S + Q G+LEL +W D+Y ++ V +LIDMY+KC
Sbjct: 345 HYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKC 404
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
GS+ AR +F +K VV W+ MI G L+G+ EA++L+H + + + PN VTF+ +L
Sbjct: 405 GSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLL 464
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H+G +++GW + D + + P +HYSC+ DLLGR G L EA F+ +PI+
Sbjct: 465 TACNHSGLVKEGWELFHCMKDFEIV---PRNEHYSCVVDLLGRAGYLGEACAFIMKIPIE 521
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+WG LL ACKI+ + +GEY A LF L+P++ YV+++N YA WD VA++R
Sbjct: 522 PGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVR 581
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+M+ + K G S+ INGK F D+ H ++ + L L +E +
Sbjct: 582 VLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGF 636
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 217/424 (51%), Gaps = 31/424 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR N T+ ++R M+ + P+ TFP++ KAC +L D S +IHG I+
Sbjct: 122 WNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQII 181
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F KC + A +FD + R + SW +++ G+AQ G LR
Sbjct: 182 KYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALR 241
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR G++ D++ ++ + +A L +S+H F I +G++ + ++ + + YA
Sbjct: 242 MFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYA 301
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + +A+ F + + V+ WN+M++G ++++N + +M+ + D TV
Sbjct: 302 KCGLVTVAKSFF--DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTV 359
Query: 248 VS--LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
S L S+ V L Q + +YG D+ V+ +LI MY+KCG ++ AR +FD
Sbjct: 360 RSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNT--SLIDMYAKCGSVEFARRVFDRN 417
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
D+ V W+AMI GY G EA+ L+ M+ AG P+ VT + +++ C SG ++ G
Sbjct: 418 SDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEG- 476
Query: 366 WFDNYACSGGLKDNVMV-----CNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
++ + C +KD +V + ++D+ + G +G+A +P E V W +++
Sbjct: 477 -WELFHC---MKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLS 532
Query: 420 GCAL 423
C +
Sbjct: 533 ACKI 536
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+ RLV S H GF ++ L++ S G I AR LFD C W A+I Y
Sbjct: 75 IHNRLVISGLQHNGF-----LMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSY 129
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
++ + + ++ M G PD T ++ C + L G +V
Sbjct: 130 SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDV 189
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V N L+ +Y+KCG IG A+ +F L + +VSWT++I+G A NG+ VEAL +F Q+
Sbjct: 190 FVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNN 249
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++P+ + +++L+A T LE+G +I
Sbjct: 250 GVKPDWIALVSILRAYTDVDDLEQGRSI 277
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI W S I +A + L +F QM+ N ++P+ + I +A + DL + IH
Sbjct: 219 TIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIH 278
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G ++K + + KC + A FD+M +V WNAM+ G+A+ G E
Sbjct: 279 GFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAE 338
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF+ M I+ D VTV A+ L L + + + +D+ V + I
Sbjct: 339 EAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLI 398
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC ++ A VF + + VV W++M+ G + +++N Y M G +
Sbjct: 399 DMYAKCGSVEFARRVFDRNSD--KDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPN 456
Query: 244 VTTVVSLLSS 253
T + LL++
Sbjct: 457 DVTFIGLLTA 466
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+++ + WN+ I A + + LF M +I+P+++T A A++ L +Q
Sbjct: 317 KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQ 376
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ ++ KS + KC ++ A ++FD + +DV W+AM++G+ G
Sbjct: 377 WMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHG 436
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ L++ M+ G+ + VT +GL A H+
Sbjct: 437 QGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHS 470
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 333/639 (52%), Gaps = 35/639 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI----- 76
+N+ IR H + L+R M + + PN TFPF+ KAC+ L DL + I
Sbjct: 68 YNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAA 127
Query: 77 ----HGHIVKSP-----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
H + S +++C R A +F +M +RDV +WNAML G+A G + +
Sbjct: 128 AAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 187
Query: 128 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLK--SVHSFGIHIGVDAD---VSVCNT 181
+M+ G++ + T++ L + A+H +L + S+H++ + ++ + V +
Sbjct: 188 HLLDMQDHGGLRPNASTLVSLL--PLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTA 245
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF- 240
+ YAKC L A VF G+ +R V+W++++ G D+ ++ N ++ M+ G
Sbjct: 246 LLDMYAKCKQLVYACRVFHGMP--VRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLC 303
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
L T+V S L L G +H+ G D++ N+L+SMY+K G I+ A +
Sbjct: 304 FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATM 363
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
FD I + +S+ A++SG Q G +EA +F M+A PD+ T++S+I C A
Sbjct: 364 FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA 423
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ GK GL +CN+LIDMY+KCG I +R++F +P + VVSW TMIAG
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGI 478
++G EA LF + P+ VTF+ ++ AC+H+G + +G W +D
Sbjct: 484 YGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHW------FDTMTH 537
Query: 479 SYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
Y P ++HY CM DLL R G L EA F+QSMP+K+D +WG LL AC+IH NI++G+
Sbjct: 538 KYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGK 597
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
V+ + KL P +V ++N ++ GR+D A +R + K KK PG S ING
Sbjct: 598 QVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSL 657
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
F D+ H S Y LD + + ++ Y + ++
Sbjct: 658 HAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFV 696
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 212/465 (45%), Gaps = 21/465 (4%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
+ Q + HI + +L A ++FD + D ++NA++ ++ +G + L+ +
Sbjct: 37 WQQELEQHISRG------QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRS 90
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M + + T + +A L +++H+ G+ D+ V I Y +C
Sbjct: 91 MLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSL 250
A VF + +R VV+WN+M+AG + ++ M + G R + +T+VSL
Sbjct: 151 FGPARNVFAKMP--MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSL 208
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLD---VSVINTLISMYSKCGDIDSARVLFDGICD 307
L AL QG +H++ + + + V + L+ MY+KC + A +F G+
Sbjct: 209 LPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPV 268
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LPDLVTVLSMISGCGQSGALELGKW 366
R V+W+A+I G+ + EA LF M G +V S + C L +G
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ 328
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G+ ++ N+L+ MY+K G I +A F + K +S+ +++GC NG+
Sbjct: 329 LHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK 388
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
EA +F ++ ++ P+ T ++++ AC+H L+ G S+I +G++ +
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII---RGLALETSI 445
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + GK+ + MP + D W T++ IH
Sbjct: 446 --CNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIH 487
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 197/578 (34%), Positives = 306/578 (52%), Gaps = 29/578 (5%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
F+ AK+ D S + +V+ ++ R + A ++FD++ RDV SWN+M+ G+
Sbjct: 170 FMVSEYAKIGDFKESICLFKIMVEKG-IEGKRPESASELFDKLCDRDVISWNSMISGYVS 228
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G E L ++ M +GI D T++ + ++ LSL K+VHS I + ++
Sbjct: 229 NGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINF 288
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
NT + Y+KC DL A VF + ER VVSW SM+AG T + D ++ + M
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGRSDGAIRLLQQMEKE 346
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G +LDV S+L + +L G+ VH + + ++ V N L+ MY+KCG +D A
Sbjct: 347 GVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGA 406
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQ 357
+F + + +SW MI GEL PD T+ ++ C
Sbjct: 407 NSVFSTMVVKDIISWNTMI----------------------GELKPDSRTMACILPACAS 444
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT M
Sbjct: 445 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 504
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+G ++G EA+ F+++ + + P+ V+F+++L AC+H+G LE+GW I +D
Sbjct: 505 ISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFN 564
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I P+L+HY+CM DLL R G L +A +F++++PI DA IWG LLC C+I+ +IE+ E
Sbjct: 565 IE--PKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEK 622
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA +F+LEP + YV +AN YA +W+ V +R + + ++K PG S I GK
Sbjct: 623 VAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVN 682
Query: 598 TF-TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
F + + H S+ +L + +EE Y K+
Sbjct: 683 LFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKY 720
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 208/479 (43%), Gaps = 86/479 (17%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIF 98
L L + K+N N F + A I+S + I +P DR
Sbjct: 13 LTLNQNRKENFFSSQNGCFIHKPTSKATFFSPIFSSCLPIRISATPTRTIDR-------- 64
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
V +NA ++ F Q+G LEN + L + ++ T + Q +K L+
Sbjct: 65 ------QVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLT 116
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL------------ 206
K VHS V D + +S YA C DLK VF +E++
Sbjct: 117 DGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 207 -------------------------------------RTVVSWNSMVAGCTYGDKFDDSL 229
R V+SWNSM++G + L
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
Y+ MMY G +D+ T++S+L L G+ VHS I F+ ++ NTL+ MY
Sbjct: 237 EIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMY 296
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
SKCGD+D A +F+ + +R VSWT+MI+GY + G D A+RL ME G D+V
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATT 356
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S++ C +SG+L+ GK +Y + ++ N+ VCNAL+DMY+KCGS+ A +F + K
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVK 416
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++SW TMI +L+P+ T +L AC LE+G I
Sbjct: 417 DIISWNTMIG---------------------ELKPDSRTMACILPACASLSALERGKEI 454
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 202/448 (45%), Gaps = 41/448 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I V+ + L +++QM I+ + T + CA L + +H +
Sbjct: 219 WNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KC LD A ++F++M R+V SW +M+ G+ + G + +R
Sbjct: 279 KSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIR 338
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G++ D V + A + L K VH + +++++ VCN + Y
Sbjct: 339 LLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYT 398
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A VF + ++ ++SWN+M+ + D T+
Sbjct: 399 KCGSMDGANSVFSTM--VVKDIISWNTMIG---------------------ELKPDSRTM 435
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+L + AL +G+ +H + + G+ D V N L+ +Y KCG + AR+LFD I
Sbjct: 436 ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
+ VSWT MISGY G +EA+ F M AG PD V+ +S++ C SG LE G ++
Sbjct: 496 KDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F ++ + ++D+ S+ G++ A E LP W ++ GC +
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYH 615
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ A + ++ EL+ P + +L
Sbjct: 616 DIELAEKVAERVFELE--PENTGYYVLL 641
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 298/545 (54%), Gaps = 5/545 (0%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
R++ A K+FDE+ RDV SWN+M+ G+ G E L LF M L+GI D T++ +
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVA 259
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ L L +++H + I ++++ N + Y+K +L A VF + ER +V
Sbjct: 260 GCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGER--SV 317
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSW SM+AG D S+ + M G D+ T+ ++L + C L G+ VH++
Sbjct: 318 VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNY 377
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
D+ V N L+ MY+KCG + A +F + + VSW MI GY++ +EA
Sbjct: 378 IKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEA 437
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L LF M+ + P+ +T+ ++ C ALE G+ + G + V NAL+DM
Sbjct: 438 LNLFVEMQYNSK-PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDM 496
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KCG++G AR LF +PEK +VSWT MIAG ++G EA+ F+++ + P+ V+F
Sbjct: 497 YLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSF 556
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+++L AC+H+G L++GW + ++ I P+ +HY+C+ DLL R G L +A F++
Sbjct: 557 ISILYACSHSGLLDEGWGFFNMMRNNCCIE--PKSEHYACIVDLLARAGNLSKAYKFIKM 614
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
MPI+ DA IWG LLC C+I+ ++++ E VA +F+LEP + YV +AN YA +W+ V
Sbjct: 615 MPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEV 674
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
+R + R ++K PG S I GK F D H + +L +EE +
Sbjct: 675 KKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHF 734
Query: 630 SHLKW 634
+++
Sbjct: 735 PKMRY 739
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 215/451 (47%), Gaps = 25/451 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I V+ + K L LF QM I + T + C+ L+ + +HG+
Sbjct: 218 SWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYA 277
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+K+ F K L+ A ++F+ M R V SW +M+ G+A+ G + +
Sbjct: 278 IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 337
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
RLF+ M GI D T+ + A L K VH++ + +D+ V N + Y
Sbjct: 338 RLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMY 397
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC + A VF E +++ +VSWN+M+ G + +++LN + M YN + + T
Sbjct: 398 AKCGSMGDAHSVFS--EMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSIT 454
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +L + AL +G+ +H H + GF LD V N L+ MY KCG + AR+LFD I
Sbjct: 455 MACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 514
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ VSWT MI+GY G EA+ F M +G PD V+ +S++ C SG L+ G
Sbjct: 515 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 574
Query: 367 FDNYA---CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCA 422
F N C K C ++D+ ++ G++ A + +P E W ++ GC
Sbjct: 575 FFNMMRNNCCIEPKSEHYAC--IVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCR 632
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ + A + + EL+ P + +L
Sbjct: 633 IYHDVKLAEKVAEHVFELE--PENTGYYVLL 661
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 217/468 (46%), Gaps = 68/468 (14%)
Query: 53 NNLTFP--FIAKACAKLSDLIYSQMIHG-HIVKSPFVKCDRLDCAYKIFDEMAVRDVASW 109
N+LT+P FI + + L+ S + H + + + + +DC KI D +
Sbjct: 23 NSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLPSETIDC--KITD---------Y 71
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
N + F ++G L + L ++ T + Q K + + +HS
Sbjct: 72 NIEICRFCELGNLRRAMELINQSPKPDLE--LRTYCSVLQLCADLKSIQDGRRIHSIIQS 129
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
V+ D + + + Y C DL+ +F + V WN ++ G F +SL
Sbjct: 130 NDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANE--KVFLWNLLMNGYAKIGNFRESL 187
Query: 230 NFYRHMMYNGFR------------------------------------------------ 241
+ ++ M G R
Sbjct: 188 SLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI 247
Query: 242 -LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D+ T+VS+++ L+ GR +H + I F ++++ N L+ MYSK G+++SA
Sbjct: 248 NTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQ 307
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + +R+ VSWT+MI+GYA++G D ++RLF ME G PD+ T+ +++ C +G
Sbjct: 308 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGL 367
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LE GK NY ++ ++ V NAL+DMY+KCGS+GDA +F + K +VSW TMI G
Sbjct: 368 LENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGG 427
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ N EAL+LF + M+ + +PN +T +L AC LE+G I
Sbjct: 428 YSKNSLPNEALNLFVE-MQYNSKPNSITMACILPACASLAALERGQEI 474
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD------- 294
L++ T S+L +++ GR +HS ++D + + L+ MY CGD
Sbjct: 99 LELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRI 158
Query: 295 ------------------------------------------IDSARVLFDGICDRTRVS 312
++SAR LFD + DR +S
Sbjct: 159 FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVIS 218
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
W +MISGY G ++ L LF M G DL T++S+++GC +G L LG+ YA
Sbjct: 219 WNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAI 278
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
+ + N L+DMYSK G++ A ++F + E+ VVSWT+MIAG A G ++
Sbjct: 279 KASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 338
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
LFH++ + + P+ T +L AC TG LE G + ++K +L + + D
Sbjct: 339 LFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENK---MQSDLFVSNALMD 395
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + G + +A M +K D W T++
Sbjct: 396 MYAKCGSMGDAHSVFSEMQVK-DIVSWNTMI 425
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ W S I + + ++ LF +M++ I P+ T I ACA L + +H
Sbjct: 316 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVH 375
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+I ++ + KC + A+ +F EM V+D+ SWN M+ G+++
Sbjct: 376 NYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPN 435
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L LF M+ + + +T+ + A L + +H + G D V N +
Sbjct: 436 EALNLFVEMQ-YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALV 494
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y KC L +A L+F I E + +VSW M+AG +++ + M +G D
Sbjct: 495 DMYLKCGALGLARLLFDMIPE--KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPD 552
Query: 244 VTTVVSLL 251
+ +S+L
Sbjct: 553 EVSFISIL 560
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 59/279 (21%)
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL- 345
++Y C I ++ VL D + I + + G+L A+ L PDL
Sbjct: 46 NLYHSCATIGTS-VLPSETIDCKITDYNIEICRFCELGNLRRAMELI----NQSPKPDLE 100
Query: 346 -VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD------ 398
T S++ C +++ G+ + S ++ + ++ + L+ MY CG + +
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160
Query: 399 -------------------------------------------ARELFYALPEKIVVSWT 415
AR+LF L ++ V+SW
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWN 220
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+MI+G NG + LDLF Q++ L + + T ++V+ C++TG L G A+ Y
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALH--GYAI 278
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
K S+ EL +C+ D+ + G L A+ ++M +S
Sbjct: 279 KA-SFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERS 316
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 333/639 (52%), Gaps = 35/639 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI----- 76
+N+ IR H + L+R M + + PN TFPF+ KAC+ L DL + I
Sbjct: 68 YNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAA 127
Query: 77 ----HGHIVKSP-----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
H + S +++C R A +F +M +RDV +WNAML G+A G + +
Sbjct: 128 AAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 187
Query: 128 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLK--SVHSFGIHIGVDAD---VSVCNT 181
+M+ G++ + T++ L + A+H +L + S+H++ + ++ + V +
Sbjct: 188 HLLDMQDHGGLRPNASTLVSLL--PLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTA 245
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF- 240
+ YAKC L A VF G+ +R V+W++++ G D+ ++ N ++ M+ G
Sbjct: 246 LLDMYAKCKQLVYACRVFHGMP--VRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLC 303
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
L T+V S L L G +H+ G D++ N+L+SMY+K G I+ A +
Sbjct: 304 FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATM 363
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
FD I + +S+ A++SG Q G +EA +F M+A PD+ T++S+I C A
Sbjct: 364 FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA 423
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ GK GL +CN+LIDMY+KCG I +R++F +P + VVSW TMIAG
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGI 478
++G EA LF + P+ VTF+ ++ AC+H+G + +G W +D
Sbjct: 484 YGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHW------FDTMTH 537
Query: 479 SYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
Y P ++HY CM DLL R G L EA F+QSMP+K+D +WG LL AC+IH NI++G+
Sbjct: 538 KYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGK 597
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
V+ + KL P +V ++N ++ GR+D A +R + K KK PG S ING
Sbjct: 598 QVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSL 657
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
F D+ H S Y LD + + ++ Y + ++
Sbjct: 658 HAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFV 696
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 212/465 (45%), Gaps = 21/465 (4%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
+ Q + HI + +L A ++FD + D ++NA++ ++ +G + L+ +
Sbjct: 37 WQQELEQHISRG------QLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRS 90
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M + + T + +A L +++H+ G+ D+ V I Y +C
Sbjct: 91 MLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSL 250
A VF + +R VV+WN+M+AG + ++ M + G R + +T+VSL
Sbjct: 151 FGPARNVFAKMP--MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSL 208
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLD---VSVINTLISMYSKCGDIDSARVLFDGICD 307
L AL QG +H++ + + + V + L+ MY+KC + A +F G+
Sbjct: 209 LPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPV 268
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LPDLVTVLSMISGCGQSGALELGKW 366
R V+W+A+I G+ + EA LF M G +V S + C L +G
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ 328
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G+ ++ N+L+ MY+K G I +A F + K +S+ +++GC NG+
Sbjct: 329 LHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK 388
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
EA +F ++ ++ P+ T ++++ AC+H L+ G S+I +G++ E
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII---RGLAL--ET 443
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + GK+ + MP + D W T++ IH
Sbjct: 444 SICNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIH 487
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 319/612 (52%), Gaps = 20/612 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVK 87
F M+ + I PN +TF + CA + +HG +V S + K
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C R D A K+F M+ D +WN M+ G+ Q G +E L FY M G+ D +T L
Sbjct: 287 CGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+ ++L K +H + + + D+ + + I +Y KC + MA+ +F
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV-- 404
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VV + +M++G + + DSL +R ++ + T+VS+L AL GR +H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
I GFD ++ +I MY+KCG ++ A +F+ + R VSW +MI+ AQ +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
A+ +F M +G D V++ + +S C + GK + L +V + LI
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNR 446
DMY+KCG++ A +F + EK +VSW ++IA C +G+ ++L LFH+++E +RP++
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TFL ++ +C H G +++G +D GI P+ +HY+C+ DL GR G+L EA +
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI--QPQQEHYACVVDLFGRAGRLTEAYET 702
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
V+SMP DAG+WGTLL AC++H N+E+ E + L L+P ++ YV ++N +A W
Sbjct: 703 VKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREW 762
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
+ V +R++MK +V+K PG S IN +T F + D H ES Y +L+ L R E
Sbjct: 763 ESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLE 822
Query: 627 AYSSHLKWIPEH 638
Y ++P H
Sbjct: 823 GYIPQ-PYLPLH 833
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/532 (28%), Positives = 258/532 (48%), Gaps = 26/532 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL------- 67
R S+I WNS I V ++ L + +M + P+ TFP + KAC L
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 68 --SDLIYS------QMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
SD + S + + ++K+ +++ ++D K+FD + +D WN ML G+A+
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKA-YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G L++V++ F MR+ I + VT + + L +H + GVD + S+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ +S Y+KC A +F + R T V+WN M++G ++SL F+ M+ +G
Sbjct: 278 NSLLSMYSKCGRFDDASKLF-RMMSRADT-VTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D T SLL S E L + +H + + + LD+ + + LI Y KC + A+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F V +TAMISGY G ++L +F + P+ +T++S++ G
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL+LG+ + G + + A+IDMY+KCG + A E+F L ++ +VSW +MI
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKG 477
CA + A+D+F Q+ + + V+ A L AC + G AI +I++
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH---- 571
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S ++ S + D+ + G LK A++ ++M K+ W +++ AC H
Sbjct: 572 -SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNH 621
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 210/452 (46%), Gaps = 23/452 (5%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+L R+ + WN I V ++L F +M + + P+ +TF + + +K
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+L Y + IH +I++ + KC + A IF + DV + AM+
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G+ G + L +F + V I + +T++ + L L + +H F I G D
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDN 474
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFY 232
++ I YAKC + +A +F ERL R +VSWNSM+ C D +++ +
Sbjct: 475 RCNIGCAVIDMYAKCGRMNLAYEIF----ERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
R M +G D ++ + LS+ + G+ +H I + DV +TLI MY+KC
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSM 351
G++ +A +F + ++ VSW ++I+ G L ++L LF M E +G PD +T L +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 352 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 409
IS C G ++ G ++F + G++ ++D++ + G + +A E ++P
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
W T++ C L+ A +LM+LD
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLD 742
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 180/366 (49%), Gaps = 9/366 (2%)
Query: 92 DCAYKIFDEMAVR--DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
DC K+F + +R + WN+++ F + G L L ++ M G+ D T L +
Sbjct: 88 DCG-KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVK 146
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A + K+ + + +G+D + V ++ I +Y + + + +F + ++
Sbjct: 147 ACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK--DC 204
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V WN M+ G D + + M + + T +LS VC L+ V H
Sbjct: 205 VIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS--VCASKLLIDLGVQLH 262
Query: 270 G--IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
G + G D + S+ N+L+SMYSKCG D A LF + V+W MISGY Q G ++
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
E+L F+ M ++G LPD +T S++ + LE K Y + ++ + +ALI
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
D Y KC + A+ +F VV +T MI+G NG ++++L++F L+++ + PN +
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 448 TFLAVL 453
T +++L
Sbjct: 443 TLVSIL 448
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 143/317 (45%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L QA + L K VH+F I + D + YA C +F ++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++ WNS+++ + +L FY M+ G DV+T L+ + V + +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
G D + V ++LI Y + G ID LFD + + V W M++GYA+ G L
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
D ++ F M P+ VT ++S C ++LG G+ + N+L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ MYSKCG DA +LF + V+W MI+G +G E+L F++++ + P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 447 VTFLAVLQACTHTGFLE 463
+TF ++L + + LE
Sbjct: 341 ITFSSLLPSVSKFENLE 357
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 202/611 (33%), Positives = 307/611 (50%), Gaps = 24/611 (3%)
Query: 35 AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------- 86
K + LF++M+ + +EP++ T + AC+ L Q +H + K F
Sbjct: 353 GEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGA 412
Query: 87 ------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
KC ++ A F E V +V WN MLV + + L N R+F M++ I +
Sbjct: 413 LLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 472
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA---EL 197
T + + I L L + +HS I + VC+ I YAK L A +
Sbjct: 473 QYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILI 532
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F G + VVSW +M+AG T + D +L +R M+ G R D + + +S+
Sbjct: 533 RFAG-----KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 587
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL +G+ +H+ GF D+ N L+++YSKCG+I+ A + F+ ++W A++
Sbjct: 588 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALV 647
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SG+ Q G+ +EALR+F M G + T S + ++ ++ GK G
Sbjct: 648 SGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 707
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
VCNA+I MY+KCGSI DA++ F L K VSW MI + +G EALD F Q+
Sbjct: 708 SETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQM 767
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++RPN VT + VL AC+H G ++KG + G++ PE HY C+ D+L R
Sbjct: 768 IHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPE--HYVCVVDMLTRA 825
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G L A DF+ MPI+ DA +W TLL AC +H N+EIGE+ A+ L +LEP +A YV ++
Sbjct: 826 GLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 885
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N YA+ +WD R MK VKK PGQS + +F D+ H ++ +
Sbjct: 886 NLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFK 945
Query: 618 CLALHSREEAY 628
L + E Y
Sbjct: 946 DLTKRASEIGY 956
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 247/513 (48%), Gaps = 31/513 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS------DLI 71
TI WN I+E +++ + K LF +M ++ PN TF + +AC S + I
Sbjct: 133 TIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQI 192
Query: 72 YSQMIHGHIVKSPFVKCDRL----------DCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
++++I+ + KS V C+ L D A ++FD + ++D +SW AM+ G ++
Sbjct: 193 HARIIYQGLGKSTIV-CNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNEC 251
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+RLF +M ++GI + A + L + + +H + +G +D VCN
Sbjct: 252 EVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 311
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG---CTYGDKFDDSLNFYRHMMYN 238
+S Y L AE +F + + R V++N+++ G C YG+K ++ ++ M +
Sbjct: 312 LVSLYFHLGSLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEK---AMELFKRMQLD 366
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G D T+ SL+ + L G+ +H++ GF + + L+++Y+KC DI++A
Sbjct: 367 GLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETA 426
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
F V W M+ Y DL + R+F M+ +P+ T S++ C +
Sbjct: 427 LNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 486
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
G LELG+ + + N VC+ LIDMY+K G + A ++ K VVSWTTMI
Sbjct: 487 GDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 546
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
AG +AL F Q+++ +R + V + AC L++G I + +
Sbjct: 547 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI----HAQACV 602
Query: 479 S-YNPELDHYSCMADLLGRKGKLKEA-LDFVQS 509
S ++ +L + + L + G ++EA L F Q+
Sbjct: 603 SGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQT 635
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 220/493 (44%), Gaps = 28/493 (5%)
Query: 50 IEPNNLTFPFIAKACAKLS-DLIYSQMIHGHIVKSPF---------------VKCDRLDC 93
I PN+ T ++ + C K + L + +H I+K F K D LD
Sbjct: 63 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGD-LDG 121
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A K+FDEM R + +WN M+ A V LF M + + T G+ +A
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 154 AK-HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+++ +H+ I+ G+ VCN I Y++ + A VF G+ L+ SW
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGL--YLKDHSSW 239
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
+M++G + + +++ + M G S+LS+ E+L G +H +
Sbjct: 240 VAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 299
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GF D V N L+S+Y G + SA +F + R V++ +I+G +Q G ++A+ L
Sbjct: 300 LGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 359
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+ G PD T+ S++ C G L G+ Y G N + AL+++Y+K
Sbjct: 360 FKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAK 419
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
C I A F + VV W M+ L + + +F Q+ ++ PN+ T+ ++
Sbjct: 420 CSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 479
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSM 510
L+ C G LE G Q + I + +L+ Y C + D+ + GKL A D +
Sbjct: 480 LKTCIRLGDLELGE-----QIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 534
Query: 511 PIKSDAGIWGTLL 523
K D W T++
Sbjct: 535 AGK-DVVSWTTMI 546
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 16/246 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N K L FRQM I + + ACA L L Q IH
Sbjct: 542 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 601
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F KC ++ AY F++ D +WNA++ GF Q G E LR
Sbjct: 602 VSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 661
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M GI ++ T +AA ++ K VH+ G D++ VCN IS YA
Sbjct: 662 VFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYA 721
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A+ F +E ++ VSWN+M+ + ++L+ + M+++ R + T+
Sbjct: 722 KCGSISDAKKQF--LELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 779
Query: 248 VSLLSS 253
V +LS+
Sbjct: 780 VGVLSA 785
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 203/621 (32%), Positives = 328/621 (52%), Gaps = 20/621 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N + E ++ + L F M ++D+E + +TF + K+ L Q +H +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ + K + A +FD M+ RD+ SWN+++ G AQ G + L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIH-AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F + G++ D T+ + +AA + LSL K VH I I +D V I +Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ +K AE++F E +V+WN+M+AG T +L + M G R D T+
Sbjct: 464 RNRCMKEAEILF---ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++ + A+ QG+ VH++ I G+DLD+ V + ++ MY KCGD+ +A+ FD I
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
V+WT MISG + G+ + A +F M G LPD T+ ++ ALE G+
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A ++ V +L+DMY+KCGSI DA LF + + +W M+ G A +GE
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E L LF Q+ L ++P++VTF+ VL AC+H+G + + + + D GI PE++HY
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGI--KPEIEHY 758
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SC+AD LGR G +K+A + ++SM +++ A ++ TLL AC++ + E G+ VA L +LEP
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEP 818
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV ++N YA +WD + RTMMK ++VKK PG S + K F +DR +
Sbjct: 819 LDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNR 878
Query: 608 ESELTYPVLDCLALHSREEAY 628
++EL Y + + ++E Y
Sbjct: 879 QTELIYRKVKDMIRDIKQEGY 899
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 230/537 (42%), Gaps = 68/537 (12%)
Query: 22 WNS------QIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
WNS Q E V +N + LLFR ++Q+ + + +T + K C + S+
Sbjct: 108 WNSILAAYAQSSECVVEN-IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
HG+ K + ++K ++ +F+EM RDV WN ML + +MGF
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E + L G+ + +T+ L + + G D+D
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARIS-------------------GDDSDAG---- 263
Query: 182 WISSYAKCDDLK-MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ S+A +D ++E++F N ++ + ++ L + M+ +
Sbjct: 264 QVKSFANGNDASSVSEIIF------------RNKGLSEYLHSGQYSALLKCFADMVESDV 311
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D T + +L++ V ++L G+ VH + G DL ++V N+LI+MY K AR
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ-SG 359
+FD + +R +SW ++I+G AQ G EA+ LF + G PD T+ S++
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
L L K +A + V ALID YS+ + +A E+ + +V+W M+A
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMA 490
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G + + + L LF + + R + T V + C + +G + Y K
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH--AYAIKS-G 547
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
Y+ +L S + D+ + G + A S+P+ D W T++ C IE GE
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC-----IENGE 598
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 210/472 (44%), Gaps = 68/472 (14%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMA 102
F F+ A SDL+ + H I+ S + KC L A ++FD+M
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 103 VRDVASWNAMLVGFAQMG--FLENVLRLFYNMRLVGIQADFVTVMGLT---QAAIHAKHL 157
RD+ SWN++L +AQ +EN+ + F R++ + + M L+ + +H+ ++
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+S H + IG+D D V ++ Y K +K +++F E R VV WN M
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLF--EEMPYRDVVLWNLM-- 217
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
L Y M GF+ + + L S+F HS G++ ++
Sbjct: 218 -----------LKAYLEM---GFKEE---AIDLSSAF------------HSSGLNPN-EI 247
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM----ISGYAQKGDLDEALRLF 333
+ ++ + S G + S F D + VS +S Y G L+ F
Sbjct: 248 TLRLLARISGDDSDAGQVKS----FANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCF 303
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M + D VT + M++ + +L LG+ A GL + V N+LI+MY K
Sbjct: 304 ADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL 363
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G AR +F + E+ ++SW ++IAG A NG VEA+ LF QL+ L+P++ T +VL
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEA 503
+A + L +G ++S Q I N D + + + D R +KEA
Sbjct: 424 KAASS---LPEGLSLS-KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + E + +F QM+ + P+ T +AKA + L+ L + IH + +
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 82 K-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K PFV KC +D AY +F + + ++ +WNAMLVG AQ G + L+
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M+ +GI+ D VT +G+ A H+
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLSACSHS 732
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 207/654 (31%), Positives = 335/654 (51%), Gaps = 51/654 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + L+LF +M+++ + N I A A L+D+ + +HGH+V
Sbjct: 345 WNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLV 404
Query: 82 KS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC ++ A+++F + R+ S+NA+L G+ Q G E L
Sbjct: 405 RNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALE 464
Query: 128 LFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L+++M+ GIQ D T L + ++ + + +H+ I + ++ V + Y
Sbjct: 465 LYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMY 524
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++C L A+ +F + ER SWNSM+ G + ++L ++ M NG + D +
Sbjct: 525 SECGRLNYAKEIFNRMAER--NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFS 582
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID---------- 296
+ S+LSS V +GR +H+ + + + + L+ MY+KCG +D
Sbjct: 583 LSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTI 642
Query: 297 ---------------------SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
A+ LFD + R W ++++GYA KG E+ F
Sbjct: 643 KKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLE 702
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCG 394
M + D++T++++++ C ALE G + G + +V++ AL+DMYSKCG
Sbjct: 703 MLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCG 762
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+I AR +F + K +VSW MI+G + +G EAL L+ ++ + + PN VTFLA+L
Sbjct: 763 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 822
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+HTG +E+G I +D I E HY+CM DLLGR G+L++A +FV+ MPI+
Sbjct: 823 ACSHTGLVEEGLRIFTSMQEDYNIEAKAE--HYTCMVDLLGRAGRLEDAKEFVEKMPIEP 880
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
+ WG LL AC++H ++++G A LF+L+P + PYV M+N YA GRW V +IR
Sbjct: 881 EVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQ 940
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
MMK VKK PG S IN + F A + H ++E Y L L L S+ Y
Sbjct: 941 MMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGY 994
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 222/463 (47%), Gaps = 17/463 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+ WN+ I ++ + L L+ +M+ + + TFP + KAC + D+ + +
Sbjct: 139 NLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQ 198
Query: 78 GHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+VK+ + + +D A DE+ V +WNA++ G+ ++ E
Sbjct: 199 SSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWE 258
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+F M +G+ D T + + K VHS I G D V N I
Sbjct: 259 EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALI 318
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKCDD + VF + E R V+WNS+++ F+D+L + M +G++ +
Sbjct: 319 DMYAKCDDEESCLKVFDEMGE--RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSN 376
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ S+L + + +GR +H H + + D+ + + L+ MYSKCG ++ A +F
Sbjct: 377 RFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFR 436
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALE 362
+ +R VS+ A+++GY Q+G +EAL L+ M++ G PD T ++++ C
Sbjct: 437 SLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDN 496
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ + + N++V L+ MYS+CG + A+E+F + E+ SW +MI G
Sbjct: 497 QGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQ 556
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
NGE EAL LF Q+ ++P+ + ++L +C +KG
Sbjct: 557 QNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 599
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 197/381 (51%), Gaps = 3/381 (0%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A K+F+EM R++ +WN M++ +A++ VLRL+ MR G +D T +
Sbjct: 123 DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVI 182
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
+A I + + ++ + S + G++ ++ V + YA+ + A IE +
Sbjct: 183 KACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGT--S 240
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
VV+WN+++AG ++++ + M+ G D T S L + G+ VHS
Sbjct: 241 VVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHS 300
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
I GF D V N LI MY+KC D +S +FD + +R +V+W ++IS AQ G ++
Sbjct: 301 KLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFND 360
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL LF M+ +G + + S++ + G+ + L ++++ +AL+D
Sbjct: 361 ALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVD 420
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRV 447
MYSKCG + +A ++F +L E+ VS+ ++AG G+ EAL+L+H + D ++P++
Sbjct: 421 MYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQF 480
Query: 448 TFLAVLQACTHTGFLEKGWAI 468
TF +L C + +G I
Sbjct: 481 TFTTLLTLCANQRNDNQGRQI 501
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 211/521 (40%), Gaps = 56/521 (10%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC---DDLKMAELVFCGIE 203
L Q I + KS+H+ I G + D + + YA+ DDL A +F +
Sbjct: 77 LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
ER + +WN+M+ D + + L Y M +G D T S++ + + E +
Sbjct: 137 ER--NLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGV 194
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R + S + G + ++ V L+ Y++ G +D A D I + V+W A+I+GY +
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKI 254
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+EA +F M G PD T S + CG + + GK + + G K + V
Sbjct: 255 LSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVG 314
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NALIDMY+KC ++F + E+ V+W ++I+ A G F +AL LF ++ E +
Sbjct: 315 NALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYK 374
Query: 444 PNRVTFLAVLQAC-----------------------------------THTGFLEKGWAI 468
NR ++L A + G +E+ +
Sbjct: 375 SNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQV 434
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP----IKSDAGIWGTLLC 524
+ +SYN L Y ++GK +EAL+ M I+ D + TLL
Sbjct: 435 FRSLLERNEVSYNALLAGYV-------QEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT 487
Query: 525 ACKIHLNIEIGEYVAYCLFKLE-PHSAAPYVEMANKYALGGRWDGVANI-RTMMKRNQVK 582
C N G + L + + E+ + Y+ GR + I M +RN
Sbjct: 488 LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYS 547
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHS 623
+ NG+T R + +L DC +L S
Sbjct: 548 WNSMIEGYQQNGET---QEALRLFKQMQLNGIKPDCFSLSS 585
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/607 (31%), Positives = 321/607 (52%), Gaps = 39/607 (6%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEM 101
FR++ + P+N T PF+ +AC L +L QM + +VKC ++ A +FD+M
Sbjct: 167 FRELIRCGARPDNYTLPFVIRACRDLKNL---QMA----LVDMYVKCREIEDARFLFDKM 219
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
RD+ +W M+ G+A+ G L LF MR G+ D V ++ + A + +
Sbjct: 220 QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 279
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+ + DV + I YAKC ++ A +F +EE+ V+SW++M+A Y
Sbjct: 280 IIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK--NVISWSAMIAAYGY 337
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+ +L+ +R M+ +G D T+ SLL + + L Q R VH+ +G ++ V
Sbjct: 338 HGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIV 397
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL--------------- 326
N L+ YS +D A LFDG+C R VSW+ M+ G+A+ GD
Sbjct: 398 ANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGA 457
Query: 327 -------------DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
+E+L LF M G +PD V +++++ C + GA+ + D+Y
Sbjct: 458 RPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 517
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
+ +V++ A+IDM++KCG + ARE+F + EK V+SW+ MIA +G+ +ALDL
Sbjct: 518 KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 577
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADL 493
F ++ + PN++T +++L AC+H G +E+G + ++D S ++ HY+C+ DL
Sbjct: 578 FPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWED--YSVRADVKHYTCVVDL 635
Query: 494 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPY 553
LGR G+L EAL ++SM ++ D G+WG L AC+ H ++ + E A L +L+P + Y
Sbjct: 636 LGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHY 695
Query: 554 VEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTY 613
+ ++N YA GRW+ VA R +M + ++KK PG + ++ K+ F+ D H S+ Y
Sbjct: 696 ILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIY 755
Query: 614 PVLDCLA 620
+L L
Sbjct: 756 EMLKSLG 762
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 177/361 (49%), Gaps = 27/361 (7%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
LD AY +FD M VRD SW+ M+ GFA++G N F + G + D T+ + +A
Sbjct: 129 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRA 188
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
K+L + + Y KC +++ A +F ++E R +V
Sbjct: 189 CRDLKNLQM---------------------ALVDMYVKCREIEDARFLFDKMQE--RDLV 225
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHS 268
+W M+ G K ++SL + M G D +V+++ F C + A+ + R++
Sbjct: 226 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVV--FACAKLGAMHKARIIDD 283
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ F LDV + +I MY+KCG ++SAR +FD + ++ +SW+AMI+ Y G +
Sbjct: 284 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 343
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL LF M ++G LPD +T+ S++ C L + A G+ N++V N L+
Sbjct: 344 ALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVH 403
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
YS ++ DA LF + + VSW+ M+ G A G+++ F +L+ RP+ T
Sbjct: 404 FYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYT 463
Query: 449 F 449
Sbjct: 464 L 464
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 214/467 (45%), Gaps = 54/467 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I +A+++L+LF +M++ + P+ + + ACAKL + +++I +I
Sbjct: 227 WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 286
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC ++ A +IFD M ++V SW+AM+ + G L
Sbjct: 287 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 346
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G+ D +T+ L A I+ ++L+ ++ VH+ G+ ++ V N + Y+
Sbjct: 347 LFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYS 406
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT- 246
L A +F G+ +R VSW+ MV G + + +R ++ G R D T
Sbjct: 407 YYRALDDAYGLFDGMC--VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTL 464
Query: 247 -------------------------VVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDV 279
V + F C + A+ + R + + F LDV
Sbjct: 465 PFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDV 524
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+ +I M++KCG ++SAR +FD + ++ +SW+AMI+ Y G +AL LF M +
Sbjct: 525 ILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRS 584
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCG 394
G LP+ +T++S++ C +G +E G F ++Y+ +K V +D+ + G
Sbjct: 585 GILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV----VDLLGRAG 640
Query: 395 SIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ +A +L ++ EK W + C + + V A L+EL
Sbjct: 641 RLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLEL 687
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 128/281 (45%), Gaps = 29/281 (10%)
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
+S+ V L Q R VH+ +G ++ V N LI YS +D A LFDG+C R
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW+ M+ G+A+ GD F + G PD T+ +I C L++
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM------- 197
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
AL+DMY KC I DAR LF + E+ +V+WT MI G A G+ E+
Sbjct: 198 --------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 243
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--S 488
L LF ++ E + P++V + V+ AC G + K I DD +LD +
Sbjct: 244 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARII-----DDYIQRKKFQLDVILGT 298
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
M D+ + G ++ A + M K+ W ++ A H
Sbjct: 299 AMIDMYAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYH 338
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 207/633 (32%), Positives = 322/633 (50%), Gaps = 37/633 (5%)
Query: 16 SSTINQWNSQIR--EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
S + +N IR + + A L L+R+M ++ + PNN TFPF KAC+ L+D
Sbjct: 85 SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCG 144
Query: 74 QMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH H + + +VKC L A IF M RD+ +WNAML G+A
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 120 GFLENVLR--LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-- 175
G + + L M++ ++ + T++ L L+ SVH++ I + +
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRN 264
Query: 176 --------VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
V + + YAKC L A VF + R V+W++++ G +
Sbjct: 265 SKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--NEVTWSALIGGFVLCSRMTQ 322
Query: 228 SLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+ ++ M+ G L T++ S L + + L G +H+ G D++ N+L+
Sbjct: 323 AFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLL 382
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
SMY+K G ID A LFD + + VS++A++SGY Q G +EA +F M+A PD
Sbjct: 383 SMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAA 442
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++S+I C AL+ G+ GL +CNALIDMY+KCG I +R++F +
Sbjct: 443 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 502
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG- 465
P + +VSW TMIAG ++G EA LF ++ L P+ VTF+ +L AC+H+G + +G
Sbjct: 503 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562
Query: 466 -WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
W G P ++HY CM DLL R G L EA +F+QSMP+++D +W LL
Sbjct: 563 HW----FHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 618
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
AC+++ NI++G+ V+ + +L P +V ++N Y+ GR+D A +R + K KK
Sbjct: 619 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKS 678
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
PG S ING F D+ H +S Y LD
Sbjct: 679 PGCSWIEINGSLHAFVGGDQSHPQSPEIYRELD 711
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 322/619 (52%), Gaps = 22/619 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ V+ + + + LF M + I PN + + C L D + + IH
Sbjct: 75 SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIH 134
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+++K + K L+ A +FDE+A D+ SWNA++ G +
Sbjct: 135 GYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHH 194
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L L M G+ + T+ +A L + +HS I + + +D + I
Sbjct: 195 RALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLI 254
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC+ + A LVF + ER +++WN++++G + ++ +++ + + M G +
Sbjct: 255 DMYSKCNSMDDARLVFKLMPER--DMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFN 312
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
TT+ ++L S +A R +H+ + GF+ D V+N+LI Y KCG ++ A +F+
Sbjct: 313 QTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFE 372
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
V +T++++ YAQ G +EALRL+ M+ G PD S+++ C A E
Sbjct: 373 ESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQ 432
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK + G ++ N+L++MY+KCGSI DA F +P + +VSW+ MI G A
Sbjct: 433 GKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQ 492
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--N 481
+G EAL LF Q++++ + PN +T ++VL AC H G + + ++ I +
Sbjct: 493 HGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHY----FNSMKILFGIE 548
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +HY+CM DLLGR GKL+ A++ V MP +++A +WG LL A +IH NI++GE A
Sbjct: 549 PMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEM 608
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L LEP + +V +AN YA G WD VA +R +MK +VKK PG S + K TF
Sbjct: 609 LLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIV 668
Query: 602 EDRYHAESELTYPVLDCLA 620
DR H+ S Y LD L+
Sbjct: 669 GDRSHSRSTEIYAKLDELS 687
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 206/446 (46%), Gaps = 38/446 (8%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAY 95
I+ N FP + KAC DL+ + +HG +V + F KC A
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
+FD + R V SWNA+ + + LF++M L GI+ + ++ + +
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ +H + I +G D+D N + YAK L+ A VF I + +VSWN++
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK--PDIVSWNAI 183
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+AGC + +L R M +G ++ T+ S L + GR +HS I
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D + LI MYSKC +D AR++F + +R ++W A+ISG++Q + +EA LF
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303
Query: 336 MEAAG---ELPDLVTVLSMISG------CGQSGALEL--GKWFDNYACSGGLKDNVMVCN 384
M G L TVL I+ C Q AL L G FDNY V N
Sbjct: 304 MHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNY-----------VVN 352
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+LID Y KCG + DA +F P +V +T+++ A +G+ EAL L+ ++ + ++P
Sbjct: 353 SLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKP 412
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISI 470
+ ++L AC E+G + +
Sbjct: 413 DSFVCSSLLNACASLSAYEQGKQVHV 438
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 186/383 (48%), Gaps = 9/383 (2%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M L+GI+ + + +A K L L K VH + G D+D V N+ + YAKC
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
A +F I +R +VVSWN++ + + D ++++ + M+ +G R + ++ S++
Sbjct: 61 FGDARSLFDAIPDR--SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMI 118
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
+ E VQGR +H + I G+D D N L+ MY+K G ++ A +FD I V
Sbjct: 119 NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV 178
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SW A+I+G AL L M +G P++ T+ S + C ELG+ +
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
+ + + LIDMYSKC S+ DAR +F +PE+ +++W +I+G + N E EA
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAA 298
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SC 489
LF + + N+ T VL++ L+ + Q + E D+Y +
Sbjct: 299 SLFPLMHTEGIGFNQTTLSTVLKS---IAALQANYMCR--QIHALSLKSGFEFDNYVVNS 353
Query: 490 MADLLGRKGKLKEALDFVQSMPI 512
+ D G+ G +++A + PI
Sbjct: 354 LIDTYGKCGHVEDATRVFEESPI 376
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 199/615 (32%), Positives = 325/615 (52%), Gaps = 22/615 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ V + + + LF +M + I+PN + + AC L D ++IHG+++
Sbjct: 226 WNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI 285
Query: 82 K-----SPF---------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K PF K L A +F+++ D+ SWNA++ G E L
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M+ GI + T+ +A L + +HS + + +++D+ V + Y+
Sbjct: 346 LLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYS 405
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD--SLNFYRHMMYNGFRLDVT 245
KCD L+ A + F + E+ +++WN++++G Y ++D +L+ + M G + T
Sbjct: 406 KCDLLEDARMAFNLLPEK--DLIAWNAIISG--YSQYWEDMEALSLFVEMHKEGIGFNQT 461
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ ++L S + + R VH + GF D+ V+N+LI Y KC ++ A +F+
Sbjct: 462 TLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 521
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
VS+T+MI+ YAQ G +EAL+LF M+ PD S+++ C A E GK
Sbjct: 522 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGK 581
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ G ++ N+L++MY+KCGSI DA F L E+ +VSW+ MI G A +G
Sbjct: 582 QLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHG 641
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+AL LF+Q+++ + PN +T ++VL AC H G + + A + ++ + P +
Sbjct: 642 HGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTE--AKLYFESMEELFGFKPMQE 699
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLLGR GK+ EA++ V MP +++A +WG LL A +IH ++E+G A LF L
Sbjct: 700 HYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFIL 759
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP + +V +AN YA G+W+ VA +R +M+ ++VKK PG S + K TF DR
Sbjct: 760 EPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRS 819
Query: 606 HAESELTYPVLDCLA 620
H S+ Y LD L+
Sbjct: 820 HYRSQEIYAKLDELS 834
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 225/463 (48%), Gaps = 16/463 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I L+ F +M ++ N TF + KAC+ + DL + +HG +V
Sbjct: 125 WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVV 184
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F KCD + ++FDE+ R+V SWNA+ + Q+ F +
Sbjct: 185 VSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVG 244
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LFY M L GI+ + ++ + A + S K +H + I +G D D N + YA
Sbjct: 245 LFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA 304
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K DL A VF I++ +VSWN+++AGC + + +L M +G ++ T+
Sbjct: 305 KVGDLADAISVFEKIKQ--PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTL 362
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L + GR +HS + + D+ V L+ MYSKC ++ AR+ F+ + +
Sbjct: 363 SSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE 422
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++W A+ISGY+Q + EAL LF M G + T+ +++ + + +
Sbjct: 423 KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 482
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G ++ V N+LID Y KC + DA +F +VS+T+MI A G+
Sbjct: 483 HGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQG 542
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
EAL LF ++ +++L+P+R ++L AC + E+G + +
Sbjct: 543 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 585
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 217/433 (50%), Gaps = 16/433 (3%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+T + + + + P ++++ + C L IH HI KS
Sbjct: 39 QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLI 98
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ KC A K+ DE + D+ SW+A++ G+AQ G L F+ M L+G++ +
Sbjct: 99 NLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEF 158
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + +A K L + K VH + G + DV V NT + YAKCD+ ++ +F I
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
ER VVSWN++ + D +++ + M+ +G + + ++ S++++ +
Sbjct: 219 PER--NVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+++H + I G+D D N L+ MY+K GD+ A +F+ I VSW A+I+G
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
++AL L M+ +G P++ T+ S + C G ELG+ + ++ ++ V
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFV 396
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
L+DMYSKC + DAR F LPEK +++W +I+G + E +EAL LF ++ + +
Sbjct: 397 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 456
Query: 443 RPNRVTFLAVLQA 455
N+ T +L++
Sbjct: 457 GFNQTTLSTILKS 469
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 212/454 (46%), Gaps = 33/454 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ I WN+ I V + L L QMK++ I PN T KACA + +
Sbjct: 320 KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGR 379
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H ++K + KCD L+ A F+ + +D+ +WNA++ G++Q
Sbjct: 380 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 439
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L LF M GI + T+ + ++ + + + + VH + G +D+ V N
Sbjct: 440 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 499
Query: 181 TWISSYAKCDDLKMAELVF--CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ I SY KC ++ AE +F C I + +VS+ SM+ + +++L + M
Sbjct: 500 SLIDSYGKCSHVEDAERIFEECTIGD----LVSFTSMITAYAQYGQGEEALKLFLEMQDM 555
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ D SLL++ A QG+ +H H + YGF LD+ N+L++MY+KCG ID A
Sbjct: 556 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 615
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
F + +R VSW+AMI G AQ G +AL+LF M G P+ +T++S++ C +
Sbjct: 616 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 675
Query: 359 GALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTT 416
G + K +F++ G K +ID+ + G I +A EL +P E W
Sbjct: 676 GLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 735
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
++ + H+ +EL R + F+
Sbjct: 736 LLGAARI-----------HKDVELGRRAAEMLFI 758
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 150/303 (49%), Gaps = 2/303 (0%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ G+ D S+ N I+ Y+KC + A + E +VSW+++++G
Sbjct: 78 IHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLV--DESSEPDLVSWSALISGYAQN 135
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+L + M G + + T S+L + + L G+ VH + GF+ DV V
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NTL+ MY+KC + ++ LFD I +R VSW A+ S Y Q EA+ LF+ M +G
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK 255
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ ++ SM++ C GK Y G + NAL+DMY+K G + DA +
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + + +VSW +IAGC L+ +AL+L Q+ + PN T + L+AC G
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLK 375
Query: 463 EKG 465
E G
Sbjct: 376 ELG 378
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P V+ ++S C + +L G + GL D+ + N LI++YSKC + G AR+L
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
E +VSW+ +I+G A NG AL FH++ L ++ N TF +VL+AC+
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 198/643 (30%), Positives = 331/643 (51%), Gaps = 49/643 (7%)
Query: 35 AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVK------- 87
+K +++FRQ+ P+N TFPF+ AC K + L +HG IVK F +
Sbjct: 120 GYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENS 179
Query: 88 -------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
C +DC ++FD+M+ R+V SW +++ G+A+ G + + LF+ M VGI+ +
Sbjct: 180 LIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPN 239
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
VT++G+ A + L L + V + + ++ + + N + Y KC + A +F
Sbjct: 240 SVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIF- 298
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
E + +V +N++++ + L M+ +G R D T++S +S+ + +
Sbjct: 299 -DECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDV 357
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G+ H + + G + +V N +I+MY KCG + A +FD + ++TRVSW ++I+G+
Sbjct: 358 SCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGF 417
Query: 321 AQKGDLD-------------------------------EALRLFFAMEAAGELPDLVTVL 349
+ GD++ EA+ LF M++ G D VT++
Sbjct: 418 VRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMV 477
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+ S CG GAL+L KW Y + ++ + AL+DM+++CG A ++F + ++
Sbjct: 478 GVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKR 537
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
V +WT I A+ G A++LF ++++ ++P+ V F+A+L A +H G +E+GW I
Sbjct: 538 DVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIF 597
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
D GI+ P+ HY CM DLLGR G L EAL + SM ++ + IWG+LL AC++H
Sbjct: 598 RSMKDIYGIA--PQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVH 655
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N++I Y A + +L+P +V ++N YA GRWD VA +R +K K PG S
Sbjct: 656 KNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSS 715
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
INGK FT D H E P+L + R+ Y L
Sbjct: 716 IEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDL 758
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 205/455 (45%), Gaps = 39/455 (8%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
+++++ GF+ G + +F + +G D T + A + L+ VH +
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
+G + D+ V N+ I Y +C ++ VF + ER VVSW S++ G + ++
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSER--NVVSWTSLIGGYAKRGCYKEA 224
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
++ + M+ G R + T+V ++S+ + L G V + +++ ++N L+ M
Sbjct: 225 VSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDM 284
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y KCG ID AR +FD D+ V + ++S Y ++G E L + M G PD +T+
Sbjct: 285 YMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITM 344
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS------------- 395
LS +S C + + GKW Y GL+ VCNA+I+MY KCG
Sbjct: 345 LSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLN 404
Query: 396 ------------------IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ A ++F A+P+ +VSW TMI F EA++LF +
Sbjct: 405 KTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVM 464
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLE-KGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ ++VT + V AC + G L+ W I+ D I ++ L + + D+ R
Sbjct: 465 QSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKD--IHFDMHLG--TALVDMFAR 520
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
G + A+ M +K D W + A + N
Sbjct: 521 CGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 202/478 (42%), Gaps = 49/478 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
W S I + + + LF +M + I PN++T + ACAKL DL + + I
Sbjct: 208 WTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIG 267
Query: 81 -------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ ++KC +D A KIFDE +++ +N ++ + + G VL
Sbjct: 268 ELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLA 327
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M G + D +T++ A +S K H + + G++ +VCN I+ Y
Sbjct: 328 VLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYM 387
Query: 188 KCDDLKMAELVFCGIEERLRT-----------------------------VVSWNSMVAG 218
KC +MA VF + + R +VSWN+M+
Sbjct: 388 KCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGA 447
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
F +++ +R M G D T+V + S+ AL + +H + D
Sbjct: 448 LVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFD 507
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ + L+ M+++CGD SA +F+ + R +WTA I A +G+ A+ LF M
Sbjct: 508 MHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQ 567
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G PD V +++++ G +E G W F + G+ + ++D+ + G +
Sbjct: 568 QGIKPDGVVFVALLTALSHGGLVEQG-WHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLL 626
Query: 397 GDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+A L ++ E V W +++A C ++ A ++ ELD P R +L
Sbjct: 627 SEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELD--PERTGIHVLL 682
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 10/226 (4%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS------ARVLF 302
S SF + + + + +HS G + + LIS ++ G +S A LF
Sbjct: 35 SPTGSFKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELF 94
Query: 303 ---DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+GI T ++++I G++ G +A+ +F + G +PD T ++S C +S
Sbjct: 95 IEDNGIMG-THYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSA 153
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL G G + ++ V N+LI Y +CG I R +F + E+ VVSWT++I
Sbjct: 154 ALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIG 213
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
G A G + EA+ LF +++E+ +RPN VT + V+ AC L+ G
Sbjct: 214 GYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLG 259
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN+ I V ++ + + LFR M+ I + +T +A AC L L ++ I
Sbjct: 436 SDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWI 495
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG+I K F +C A ++F++M RDV++W A + A G
Sbjct: 496 HGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNG 555
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ LF M GI+ D V + L A H
Sbjct: 556 TGAIELFDEMLQQGIKPDGVVFVALLTALSHG 587
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 42/204 (20%)
Query: 385 ALIDMYSKCGSIGDARELFYA-------LPEKIVVS----WTTMIAGCALNGEFVEALDL 433
+L ++ S C +G L YA + + ++ ++++I G + G +A+ +
Sbjct: 67 SLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVV 126
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQ--------YDDKGISYNPE 483
F QLM + P+ TF VL ACT + L +G+ + +I++ ++ I + E
Sbjct: 127 FRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGE 186
Query: 484 LDHYSCM---------------ADLLG---RKGKLKEALDFVQSM---PIKSDAGIWGTL 522
CM L+G ++G KEA+ M I+ ++ +
Sbjct: 187 CGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGV 246
Query: 523 LCACKIHLNIEIGEYVAYCLFKLE 546
+ AC ++++GE V C+ +LE
Sbjct: 247 ISACAKLQDLQLGEQVCTCIGELE 270
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 208/629 (33%), Positives = 321/629 (51%), Gaps = 20/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I V A L LF M ++ + +AC +L D+ + +H H +
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 179
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + K +D + +F+ + +D+ SW +++ GFAQ GF L+
Sbjct: 180 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M + G G A A + +H I +D D+ V + Y
Sbjct: 240 VFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 299
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+ +L A + F IE +VSWNS+V + ++L + M +G R D T
Sbjct: 300 ARFKNLDSARVAFYRIEAP--DLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGIT 357
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V LL + V +AL GRL+HS+ + G D DVSV N+L+SMY++C D+ SA +F I
Sbjct: 358 VRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK 417
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D+ V+W ++++ AQ +E L+LF + + D +++ +++S + G E+ K
Sbjct: 418 DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQ 477
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNG 425
YA GL D+ M+ N LID Y+KCGS+ DA LF + + V SW+++I G A G
Sbjct: 478 VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFG 537
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EALDLF ++ L +RPN VTF+ VL AC+ GF+ +G I + GI P +
Sbjct: 538 YAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIV--PTRE 595
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H SC+ DLL R GKL EA +F+ MP + D +W TLL A K+H ++E+G+ A + +
Sbjct: 596 HCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNI 655
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P +A YV + N YA G W+ A ++ M+ + VKK PG+S + G+ F EDR
Sbjct: 656 DPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRS 715
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
H ESE Y +L+ + + + Y W
Sbjct: 716 HPESEEIYAMLELIGMEMIKAGYVPKHSW 744
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 227/496 (45%), Gaps = 41/496 (8%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSP---------------------FVKCDRLDCAY 95
+ + AC++L L + +H H+V S + +C D A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++FDEM R+ SW +++ Q G + L LF +M G AD + +A
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ + VH+ + +D+ V N ++ Y+K + ++F I++ + ++SW S+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD--KDLISWGSI 224
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ---GRLVHSHGIH 272
+AG ++L +R M+ G S+F A+ G +H I
Sbjct: 225 IAGFAQQGFEMEALQVFRKMIVEGSHH--PNEFHFGSAFRACGAVGSWEYGEQIHGLSIK 282
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
Y D D+ V +L MY++ ++DSARV F I VSW ++++ Y+ +G L EAL L
Sbjct: 283 YRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVL 342
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M +G PD +TV ++ C AL G+ +Y GL +V VCN+L+ MY++
Sbjct: 343 FSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYAR 402
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
C + A ++F+ + ++ VV+W +++ CA + E L LF L + + +R++ V
Sbjct: 403 CSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNV 462
Query: 453 LQACTHTGFLE-----KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
L A G+ E +A DD+ +S N +D Y+ + G L +A+
Sbjct: 463 LSASAELGYFEMVKQVHAYAFKAGLVDDRMLS-NTLIDTYA-------KCGSLDDAMRLF 514
Query: 508 QSMPIKSDAGIWGTLL 523
+ M D W +L+
Sbjct: 515 EIMGNNRDVFSWSSLI 530
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 221/684 (32%), Positives = 339/684 (49%), Gaps = 80/684 (11%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFI 60
+ + LPP S++ WN IR A++ L+RQMK P++ TFPF+
Sbjct: 212 LLLERLPPS------PSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFV 265
Query: 61 AKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEM---AV 103
KACA LS L +H + +S F KC L A+ +FD++ +
Sbjct: 266 FKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGI 325
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA-DFVTVMGLTQAAIHAKHLSLLKS 162
+D+ SWN+++ + L LF+ M + + D ++++ + A +
Sbjct: 326 QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ 385
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH F I G+ DV V N + YAKC ++ A VF + + + VVSWN+MV G +
Sbjct: 386 VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM--KFKDVVSWNAMVTGYSQA 443
Query: 223 DKFD-----------------------------------DSLNFYRHMMYNGFRLDVTTV 247
+ + ++L+ +R M G R +V T+
Sbjct: 444 GRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTL 503
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLD--------VSVINTLISMYSKCGDIDSAR 299
VSLLS+ V AL+ G+ H + I + +LD + VIN LI MY+KC + AR
Sbjct: 504 VSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVAR 563
Query: 300 VLFDGIC--DRTRVSWTAMISGYAQKGDLDEALRLF---FAMEAAGELPDLVTVLSMISG 354
+FD + DR V+WT MI GYAQ GD + AL+LF F M+ + + P+ T+ +
Sbjct: 564 KMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIK-PNDFTLSCALVA 622
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVM--VCNALIDMYSKCGSIGDARELFYALPEKIVV 412
C + AL G+ Y +VM V N LIDMYSK G + A+ +F +P++ V
Sbjct: 623 CARLAALRFGRQVHAYVLRN-FYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAV 681
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SWT+++ G ++G +AL +F ++ ++ L P+ +TFL VL AC+H+G ++ G I+
Sbjct: 682 SWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHG--INFFN 739
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
K +P +HY+CM DL GR G+L EA+ + MP++ +W LL AC++H N+
Sbjct: 740 RMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNV 799
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
E+GE+ A L +LE + Y ++N YA RW VA IR MKR +KK PG S
Sbjct: 800 ELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQG 859
Query: 593 NGKTCTFTAEDRYHAESELTYPVL 616
TF DR H +S+ Y L
Sbjct: 860 RKGVATFYVGDRSHPQSQQIYETL 883
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 158/341 (46%), Gaps = 17/341 (4%)
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F N RL+ +T + + HAK L + H+ + I +Y
Sbjct: 152 FTNTRLLSCATIPITALKECNSLAHAKLLHQQSIMQGLLFHLATNL--------IGTYIA 203
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
+ A L+ + +V WN ++ + D YR M G+ D T
Sbjct: 204 SNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFP 263
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
+ + +L G +H+ GF +V V N ++SMY KCG + A +FD +C R
Sbjct: 264 FVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHR 323
Query: 309 ---TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELG 364
VSW +++S Y D + AL LF M + PD++++++++ C A G
Sbjct: 324 GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRG 383
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ ++ GL D+V V NA++DMY+KCG + +A ++F + K VVSW M+ G +
Sbjct: 384 RQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQA 443
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
G AL LF ++ E ++ + VT+ AV+ TG+ ++G
Sbjct: 444 GRLEHALSLFERMTEENIELDVVTWTAVI-----TGYAQRG 479
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 319/623 (51%), Gaps = 27/623 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA----KACAKLSDLIYSQMIH 77
W + I VN N++ + LLLF+ M+ +E PFI KAC SD+ Y +++H
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMR---VESGLRIDPFILSLAHKACGLNSDVNYGELLH 139
Query: 78 GHIVK-----SPFVKCDRLDCAYK---------IFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+ VK S FV LD K +F EM +R+V SW A++ G + G+ +
Sbjct: 140 GYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNK 199
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F M ++ D T +A + L+ + +H+ + G D V NT
Sbjct: 200 EALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLA 259
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y KC L+ +F + +R VVSW +++ + + ++ + M + +
Sbjct: 260 TMYNKCGKLEYGLTLFEKMS--MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPN 317
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T +++S + G +H+ +H G +SV N++++MY+KCG + S+ V+F
Sbjct: 318 EYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R VSW+ +I+GY+Q G + EA L M G P + S++S CG LE
Sbjct: 378 EMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEH 437
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK Y S GL+ MV +ALI+MY KCGSI +A +F A +VSWT MI G A
Sbjct: 438 GKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAE 497
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G E +DLF ++ + LRP+ VTF+ VL AC+H G ++ G+ K +P
Sbjct: 498 HGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGF--RYFNAMSKKYQISPS 555
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+HY CM DLL R G+L +A +++MP D +W TLL AC++H ++E G A +
Sbjct: 556 KEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERIL 615
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+LEP+ A ++ +AN YA G+W A+IR +MK V K PG S + F A D
Sbjct: 616 QLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGD 675
Query: 604 RYHAESELTYPVLDCLALHSREE 626
R H + E Y +LD LA SR E
Sbjct: 676 RSHPQGEDIYNMLDLLA--SRTE 696
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 185/383 (48%), Gaps = 5/383 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGIQAD-FV 142
VK L A ++FD+M+ +D SW ++ G+ L LF NMR+ G++ D F+
Sbjct: 59 LVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFI 118
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ +++ ++ + +H + + G+ V V + + Y K + VF
Sbjct: 119 LSLAHKACGLNSD-VNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFH-- 175
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E +R VVSW +++ G ++L ++ M + D T L + AL
Sbjct: 176 EMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNY 235
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H+ + GFD+ V NTL +MY+KCG ++ LF+ + R VSWT +I+ Q
Sbjct: 236 GREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQ 295
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G + A++ F M + P+ T ++ISGC +E G+ GL ++ V
Sbjct: 296 MGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSV 355
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+++ MY+KCG + + +F+ + + +VSW+T+IAG + G EA +L +
Sbjct: 356 ENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGP 415
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
+P +VL AC + LE G
Sbjct: 416 KPTEFALASVLSACGNMAILEHG 438
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 17/308 (5%)
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
S IH+ D+ N + K G + +AR +FD + + +SWT +ISGY D
Sbjct: 38 SQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSS 97
Query: 328 EALRLFFAMEAAGELPDLVTVLSMI-SGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
EAL LF M L +LS+ CG + + G+ YA GL ++V V +AL
Sbjct: 98 EALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSAL 157
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+K G I + R +F+ +P + VVSWT +I G G EAL F ++ + +
Sbjct: 158 LDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDS 217
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
TF L+AC +G L G I Q KG + + + +A + + GKL+ L
Sbjct: 218 YTFAIALKACADSGALNYGREIH-AQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTL 274
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIG--EYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ M ++ D W T++ +++G E ++ +P N+Y
Sbjct: 275 FEKMSMR-DVVSWTTIITTL-----VQMGQEECAVQAFIRMRESDVSP-----NEYTFAA 323
Query: 565 RWDGVANI 572
G AN+
Sbjct: 324 VISGCANL 331
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 310/574 (54%), Gaps = 19/574 (3%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKI 97
P+ T + CA+ D+ IHG VK + KC L A +
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQML 191
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKH 156
FD+ ++ SWN M+ G G++ LF M++ I+ + VTV+ + A +
Sbjct: 192 FDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQ 251
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L LK +H + I G D V N ++++YAKC L AE VF +E + TV SWN+++
Sbjct: 252 LRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK--TVNSWNALI 309
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
GC +LN Y M Y+G D T+ SLL + ++L G+ VH + +G +
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLE 369
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+D + +L+S+Y CG+ SAR+LFDG+ +++ VSW AMISGY+Q G ++AL LF +
Sbjct: 370 IDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKL 429
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G P + V+S++ C Q AL LGK YA L ++V V + IDMY+K G I
Sbjct: 430 VSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCI 489
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
++R +F L K + SW +IA ++G+ E+++LF ++ ++ P+ TF+ +L C
Sbjct: 490 KESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVC 549
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+H G +E+G + GI P+L+HY+C+ D+LGR G+L +AL V MP + D+
Sbjct: 550 SHAGLVEEGLKYFNEMQNFHGIE--PKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDS 607
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
+W +LL C+ +EIG+ VA L +LEP + YV ++N YA GRWD V +R M+
Sbjct: 608 RVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMI 667
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
K ++K G S + GK +F A D +S+
Sbjct: 668 KDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSK 701
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 254/526 (48%), Gaps = 37/526 (7%)
Query: 29 AVNKNEAHKTL--LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK---- 82
AV++NE + + + + + +N TFP + KAC D ++IHG ++K
Sbjct: 4 AVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLL 63
Query: 83 ----------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM 132
+ + K +D A K+F M VR++ SWN+++ GF++ GF ++ + M
Sbjct: 64 LDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEM 123
Query: 133 RL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
G+ D T++ + + + +H + +G+ DV V N+ + Y+KC
Sbjct: 124 MAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCG 183
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHM-MYNGFRLDVTTVV 248
L A+++F + + VSWN+M+ G CT G F ++ N +R M M ++ TV+
Sbjct: 184 YLTEAQMLF--DKNNRKNAVSWNTMIGGLCTKGYIF-EAFNLFREMQMQEDIEVNEVTVL 240
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
++L + + L + +H + I +GF D V N ++ Y+KCG + A +F + +
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK 300
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
T SW A+I G AQ GD +AL L+ M +G +PD T+ S++ +L GK
Sbjct: 301 TVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVH 360
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
+ GL+ + + +L+ +Y CG AR LF + EK VSW MI+G + NG
Sbjct: 361 GFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPE 420
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-----WAISIIQYDDKGISYNPE 483
+AL LF +L+ +P+ + ++VL AC+ L G +A+ + +D ++ +
Sbjct: 421 DALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACST- 479
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
D+ + G +KE+ + K D W ++ A +H
Sbjct: 480 -------IDMYAKSGCIKESRSVFDGLKNK-DLASWNAIIAAYGVH 517
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 51/366 (13%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ T+N WN+ I + K L L+ QM + + P+ T + A A L L Y +
Sbjct: 298 ETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGK 357
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+HG +++ S ++ C A +FD M + SWNAM+ G++Q G
Sbjct: 358 EVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNG 417
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
E+ L LF + G Q + V+ + A L L K H + + + DV V
Sbjct: 418 LPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVAC 477
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I YAK +K + VF G++ + + SWN+++A ++S+ + M G
Sbjct: 478 STIDMYAKSGCIKESRSVFDGLKN--KDLASWNAIIAAYGVHGDGEESIELFERMRKVGQ 535
Query: 241 RLDVTTVVSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D T + +L+ VC A LV+ G+ Y N + +
Sbjct: 536 MPDGFTFIGILT--VCSHAGLVE------EGLKY--------FNEMQN------------ 567
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F GI + + ++ + G LD+ALRL M E PD S++S C G
Sbjct: 568 --FHGIEPKLE-HYACVMDMLGRAGRLDDALRLVHEMP---EQPDSRVWSSLLSFCRNFG 621
Query: 360 ALELGK 365
LE+G+
Sbjct: 622 ELEIGQ 627
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 209/617 (33%), Positives = 312/617 (50%), Gaps = 25/617 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA----KACAKLSDLIYSQMIH 77
W + I VN + L LF +M +EP PFI KAC + + + +H
Sbjct: 35 WTTIISGYVNGMNTTEALSLFSKMW---VEPGLHMDPFILSLALKACGLNMSVSFGESLH 91
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+ VK+ FV K ++D +F EM +R+V SW A++ G + G+ +
Sbjct: 92 GYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNK 151
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F +M + + D T +A + L+ + +H + G A V NT
Sbjct: 152 EALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLA 211
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y KC L +F + +R VVSW +++ + ++++ +R M +
Sbjct: 212 TMYNKCGKLDYGLRLFESMTQR--DVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPN 269
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T +++S + G +H+H I G +SV N++++MYSKC +D A +F
Sbjct: 270 EFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQ 329
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
G+ R +SW+ MISGYAQ G +EA M G P+ S++S CG LE
Sbjct: 330 GLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQ 389
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK + GL+ N MV +ALI+MYSKCGSI +A ++F +VSWT MI G A
Sbjct: 390 GKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAE 449
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G EA+DLF +L ++ LRP+ VTF+AVL AC+H G ++ G+ K P
Sbjct: 450 HGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGF--HYFNSLSKVHQICPS 507
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
DHY CM DLL R G+L +A +QSMP + D +W TLL AC+IH +++ G+ A +
Sbjct: 508 KDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKIL 567
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+L+P+ A ++ +AN YA G+W A +R MMK V K PG S + F + D
Sbjct: 568 QLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGD 627
Query: 604 RYHAESELTYPVLDCLA 620
R H E E Y VLD LA
Sbjct: 628 RSHPEGEYIYDVLDLLA 644
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 183/389 (47%), Gaps = 5/389 (1%)
Query: 79 HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGI 137
++V VK L+ A ++FD+M RD SW ++ G+ L LF M + G+
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 138 QAD-FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
D F+ + L ++ +S +S+H + + V V + + Y K +
Sbjct: 65 HMDPFILSLALKACGLNMS-VSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
+VF E LR VVSW +++AG ++L ++ M D T S L +
Sbjct: 124 IVF--KEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACAD 181
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
AL GR +H + GF V NTL +MY+KCG +D LF+ + R VSWT +
Sbjct: 182 SGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTI 241
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I Q G + A++ F M P+ T ++ISGC G +E G+ + GL
Sbjct: 242 IMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGL 301
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
D++ V N+++ MYSKC + A +F L + ++SW+TMI+G A G EA D
Sbjct: 302 VDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSW 361
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ RPN F +VL C + LE+G
Sbjct: 362 MRREGPRPNEFAFASVLSVCGNMAILEQG 390
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
IN ++ K G +++AR LFD + R +SWT +ISGY + EAL LF M
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63
Query: 342 LPDLVTVLSM-ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
L +LS+ + CG + ++ G+ Y+ ++V V +AL+DMY K G + +
Sbjct: 64 LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F +P + VVSWT +IAG G EAL F + + + TF + L+AC +G
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
L G I Q KG + + + +A + + GKL L +SM + D W
Sbjct: 184 ALNYGREIH-CQTLKKGFTAVSFVAN--TLATMYNKCGKLDYGLRLFESMT-QRDVVSWT 239
Query: 521 TLLCACKIHLNIEIGE 536
T++ + N++IG+
Sbjct: 240 TIIMS-----NVQIGQ 250
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 321/608 (52%), Gaps = 20/608 (3%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-------------- 82
+ L L+ +M +I PN TFP + K CA +SD+ + IH H+++
Sbjct: 181 EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALI 240
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ +VKC + A +FD+M RD SWNAM+ G+ + G L LF MR + + D +
Sbjct: 241 TMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLI 300
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + A + L + VH + + D+S+ N+ I Y+ L+ AE VF +
Sbjct: 301 TMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM 360
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E + VVSW +M+A ++ Y+ M G D T+VS+LS+ C L
Sbjct: 361 ESK--DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL 418
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G +H I G V V N+LI MYSKC +D+A +F I + VSWT++I G
Sbjct: 419 GIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRI 478
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
EAL LFF P+ VT++S++S C + GAL GK +A G+ + +
Sbjct: 479 NNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFL 537
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
NA++DMY +CG A F + +K V +W ++ G A G+ A++LF +++EL++
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
P+ +TF+++L AC+ +G + +G I + ++ P L HY+C+ D+LGR G+L +
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT--PNLKHYACVVDILGRAGQLDD 654
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A DF+Q MPI+ DA IWG LL AC+IH N+E+GE A +F+ + S Y+ + N YA
Sbjct: 655 AYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAG 714
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
G WD V+ +R++M+ + PG S I GK F + D H++S+ VLD
Sbjct: 715 CGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSK 774
Query: 623 SREEAYSS 630
+E + +
Sbjct: 775 MKENGFGN 782
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 230/446 (51%), Gaps = 8/446 (1%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+ + S FV+ L A+ +F +M+ RDV SWN ++ G+A+ G + L L++ M I
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ + T + + ++ K +H+ I G ++DV V N I+ Y KC D+ A +
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
+F + +R R +SWN+M++G + L + M D+ T+ ++ S+
Sbjct: 255 LFDKMPKRDR--ISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELL 312
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ GR VH + + F D+S+ N+LI MYS G ++ A +F + + VSWTAMI
Sbjct: 313 DNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMI 372
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ +A+ + ME G LPD +T++S++S C G L+LG A GL
Sbjct: 373 ASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLV 432
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V+V N+LIDMYSKC + +A E+F + K VVSWT++I G +N EAL F Q+
Sbjct: 433 SHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM 492
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
E ++PN VT ++VL AC G L +G I G+ ++ L + + D+ R
Sbjct: 493 KE-SMKPNSVTLISVLSACARIGALMRGKEIH-AHALRTGVGFDGFLPN--AILDMYVRC 548
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLL 523
G+ AL+ S K D W LL
Sbjct: 549 GRKVPALNQFNSQ--KKDVTAWNILL 572
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 8/318 (2%)
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + N +S + + +L A VF + ER V SWN +V G FD++LN Y M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSER--DVFSWNVLVGGYAKAGCFDEALNLYHRM 189
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
++ R +V T S+L + + +G+ +H+H I +GF+ DV V N LI+MY KCGDI
Sbjct: 190 LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+AR+LFD + R R+SW AMISGY + G E L LF M PDL+T+ ++ S C
Sbjct: 250 SNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
LG+ Y ++ + N+LI MYS G + +A +F + K VVSWT
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369
Query: 416 TMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
MIA + +A++ + ++MEL+ + P+ +T ++VL AC G L+ G + I
Sbjct: 370 AMIASLVSHKLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428
Query: 475 DKGISY----NPELDHYS 488
+S+ N +D YS
Sbjct: 429 TGLVSHVIVSNSLIDMYS 446
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 29/153 (18%)
Query: 8 PRLNRI-YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK 66
P LN+ + + WN + + +A + LF +M + +I P+ +TF + AC+K
Sbjct: 553 PALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSK 612
Query: 67 LSDLIYSQMIHGHIVKSPFV----------------KCDRLDCAYKIFDEMAVR-DVASW 109
S ++ + + +I+K+ + + +LD AY +M +R D A W
Sbjct: 613 -SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIW 671
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
A+L N R+ N+ L I A V
Sbjct: 672 GALL----------NACRIHRNVELGEIAAKRV 694
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 321/608 (52%), Gaps = 20/608 (3%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-------------- 82
+ L L+ +M +I PN TFP + K CA +SD+ + IH H+++
Sbjct: 181 EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALI 240
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ +VKC + A +FD+M RD SWNAM+ G+ + G L LF MR + + D +
Sbjct: 241 TMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLI 300
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + A + L + VH + + D+S+ N+ I Y+ L+ AE VF +
Sbjct: 301 TMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM 360
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E + VVSW +M+A ++ Y+ M G D T+VS+LS+ C L
Sbjct: 361 ESK--DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL 418
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G +H I G V V N+LI MYSKC +D+A +F I + VSWT++I G
Sbjct: 419 GIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRI 478
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
EAL LFF P+ VT++S++S C + GAL GK +A G+ + +
Sbjct: 479 NNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFL 537
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
NA++DMY +CG A F + +K V +W ++ G A G+ A++LF +++EL++
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
P+ +TF+++L AC+ +G + +G I + ++ P L HY+C+ D+LGR G+L +
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT--PNLKHYACVVDILGRAGQLDD 654
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A DF+Q MPI+ DA IWG LL AC+IH N+E+GE A +F+ + S Y+ + N YA
Sbjct: 655 AYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAG 714
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
G WD V+ +R++M+ + PG S I GK F + D H++S+ VLD
Sbjct: 715 CGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSK 774
Query: 623 SREEAYSS 630
+E + +
Sbjct: 775 MKENGFGN 782
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 230/446 (51%), Gaps = 8/446 (1%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+ + S FV+ L A+ +F +M+ RDV SWN ++ G+A+ G + L L++ M I
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ + T + + ++ K +H+ I G ++DV V N I+ Y KC D+ A +
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
+F + +R R +SWN+M++G + L + M D+ T+ ++ S+
Sbjct: 255 LFDKMPKRDR--ISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELL 312
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ GR VH + + F D+S+ N+LI MYS G ++ A +F + + VSWTAMI
Sbjct: 313 DNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMI 372
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ +A+ + ME G LPD +T++S++S C G L+LG A GL
Sbjct: 373 ASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLV 432
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V+V N+LIDMYSKC + +A E+F + K VVSWT++I G +N EAL F Q+
Sbjct: 433 SHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM 492
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
E ++PN VT ++VL AC G L +G I G+ ++ L + + D+ R
Sbjct: 493 KE-SMKPNSVTLISVLSACARIGALMRGKEIH-AHALRTGVGFDGFLPN--AILDMYVRC 548
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLL 523
G+ AL+ S K D W LL
Sbjct: 549 GRKVPALNQFNSQ--KKDVTAWNILL 572
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 8/318 (2%)
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + N +S + + +L A VF + ER V SWN +V G FD++LN Y M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSER--DVFSWNVLVGGYAKAGCFDEALNLYHRM 189
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
++ R +V T S+L + + +G+ +H+H I +GF+ DV V N LI+MY KCGDI
Sbjct: 190 LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+AR+LFD + R R+SW AMISGY + G E L LF M PDL+T+ ++ S C
Sbjct: 250 SNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
LG+ Y ++ + N+LI MYS G + +A +F + K VVSWT
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369
Query: 416 TMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
MIA + +A++ + ++MEL+ + P+ +T ++VL AC G L+ G + I
Sbjct: 370 AMIASLVSHKLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428
Query: 475 DKGISY----NPELDHYS 488
+S+ N +D YS
Sbjct: 429 TGLVSHVIVSNSLIDMYS 446
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 29/153 (18%)
Query: 8 PRLNRI-YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK 66
P LN+ + + WN + + +A + LF +M + +I P+ +TF + AC+K
Sbjct: 553 PALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSK 612
Query: 67 LSDLIYSQMIHGHIVKSPFV----------------KCDRLDCAYKIFDEMAVR-DVASW 109
S ++ + + +I+K+ + + +LD AY +M +R D A W
Sbjct: 613 -SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIW 671
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
A+L N R+ N+ L I A V
Sbjct: 672 GALL----------NACRIHRNVELGEIAAKRV 694
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 318/623 (51%), Gaps = 27/623 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA----KACAKLSDLIYSQMIH 77
W + I VN N++ + LLLF+ M+ +E PFI KAC SD+ Y +++H
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMR---VESGLRIDPFILSLAHKACGLNSDVNYGELLH 139
Query: 78 GHIVK-----SPFVKCDRLDCAYK---------IFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+ VK S FV LD K +F EM +R+V SW A++ G + G+ +
Sbjct: 140 GYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNK 199
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F M ++ D T +A + L+ + +H+ + G D V NT
Sbjct: 200 EALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLA 259
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y KC L+ +F + +R VVSW +++ + + ++ + M + +
Sbjct: 260 TMYNKCGKLEYGLTLFEKMS--MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPN 317
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T +++S + G +H+ +H G +SV N++++MY+KCG + S+ V+F
Sbjct: 318 EYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R VSW+ +I+GY Q G + EA L M G P + S++S CG LE
Sbjct: 378 EMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEH 437
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK Y S GL+ MV +ALI+MY KCGSI +A +F A +VSWT MI G A
Sbjct: 438 GKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAE 497
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G E +DLF ++ + LRP+ VTF+ VL AC+H G ++ G+ K +P
Sbjct: 498 HGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGF--HYFNAMSKKYQISPS 555
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+HY CM DLL R G+L +A +++MP D +W TLL AC++H ++E G A +
Sbjct: 556 KEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERIL 615
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+LEP+ A ++ +AN YA G+W A+IR +MK V K PG S + F A D
Sbjct: 616 QLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGD 675
Query: 604 RYHAESELTYPVLDCLALHSREE 626
R H + E Y +LD LA SR E
Sbjct: 676 RSHPQGEDIYNMLDLLA--SRTE 696
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 184/383 (48%), Gaps = 5/383 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGIQAD-FV 142
VK L A ++FD+M+ +D SW ++ G+ L LF NMR+ G++ D F+
Sbjct: 59 LVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFI 118
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ +++ ++ + +H + + G+ V V + + Y K + VF
Sbjct: 119 LSLAHKACGLNSD-VNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFH-- 175
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E +R VVSW +++ G ++L ++ M + D T L + AL
Sbjct: 176 EMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNY 235
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H+ + GFD+ V NTL +MY+KCG ++ LF+ + R VSWT +I+ Q
Sbjct: 236 GREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQ 295
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G + A++ F M + P+ T ++ISGC +E G+ GL ++ V
Sbjct: 296 MGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSV 355
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+++ MY+KCG + + +F+ + + +VSW+T+IAG G EA +L +
Sbjct: 356 ENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGP 415
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
+P +VL AC + LE G
Sbjct: 416 KPTEFALASVLSACGNMAILEHG 438
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 17/308 (5%)
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
S IH+ D+ N + K G + +AR +FD + + +SWT +ISGY D
Sbjct: 38 SQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSS 97
Query: 328 EALRLFFAMEAAGELPDLVTVLSMI-SGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
EAL LF M L +LS+ CG + + G+ YA GL ++V V +AL
Sbjct: 98 EALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSAL 157
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+K G I + R +F+ +P + VVSWT +I G G EAL F ++ + +
Sbjct: 158 LDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDS 217
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
TF L+AC +G L G I Q KG + + + +A + + GKL+ L
Sbjct: 218 YTFAIALKACADSGALNYGREIH-AQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTL 274
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIG--EYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ M ++ D W T++ +++G E ++ +P N+Y
Sbjct: 275 FEKMSMR-DVVSWTTIITTL-----VQMGQEECAVQAFIRMRESDVSP-----NEYTFAA 323
Query: 565 RWDGVANI 572
G AN+
Sbjct: 324 VISGCANL 331
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 309/578 (53%), Gaps = 29/578 (5%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
F+ AK+ D S + +V+ ++ R + A+++FD++ RDV SWN+M+ G+
Sbjct: 170 FMVSEYAKIGDFKESICLFKIMVEKG-IEGKRPESAFELFDKLCDRDVISWNSMISGYVS 228
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G E L ++ M +GI D T++ + ++ LSL K+VHS I + ++
Sbjct: 229 NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
NT + Y+KC DL A VF + ER VVSW SM+AG T + D ++ + M
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGRSDGAIKLLQQMEKE 346
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G +LDV + S+L + +L G+ VH + + ++ V N L+ MY+KCG +++A
Sbjct: 347 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAA 406
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQ 357
+F + + +SW MI GEL PD T+ ++ C
Sbjct: 407 NSVFSTMVVKDIISWNTMI----------------------GELKPDSRTMACVLPACAS 444
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT M
Sbjct: 445 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 504
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG ++G EA+ F+++ + + P+ V+F+++L AC+H+G LE+GW I +D
Sbjct: 505 IAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFN 564
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I P+L+HY+CM DLL R G L +A +F++++PI DA IWG LLC C+ + +IE+ E
Sbjct: 565 IE--PKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEK 622
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA +F+LEP ++ YV +AN YA +W+ V +R + + ++K PG S I GK
Sbjct: 623 VAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVN 682
Query: 598 TF-TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
F + + H S+ +L + +EE + K+
Sbjct: 683 LFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKY 720
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 207/479 (43%), Gaps = 86/479 (17%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIF 98
L L + K+N N F K+ I+S I I +P D
Sbjct: 13 LTLNQNRKENFFSSQNGCFIHKPSLKTKIFSPIFSSCIPIRISATPTRTIDH-------- 64
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
V +NA ++ F Q+G LEN + L + ++ T + Q K +
Sbjct: 65 ------QVTDYNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFT 116
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL------------ 206
K VHS V D ++ +S YA C DLK VF +E++
Sbjct: 117 DGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 207 -------------------------------------RTVVSWNSMVAGCTYGDKFDDSL 229
R V+SWNSM++G + L
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
Y+ MMY G +D+ T++S+L L G+ VHS I F+ ++ NTL+ MY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
SKCGD+D A +F+ + +R VSWT+MI+GY + G D A++L ME G D+V +
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S++ C +SG+L+ GK +Y + ++ N+ VCNAL+DMY+KCGS+ A +F + K
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK 416
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++SW TMI +L+P+ T VL AC LE+G I
Sbjct: 417 DIISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEI 454
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 192/416 (46%), Gaps = 39/416 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I V+ + L +++QM I+ + T + CA L + +H +
Sbjct: 219 WNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KC LD A ++F++M R+V SW +M+ G+ + G + ++
Sbjct: 279 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIK 338
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G++ D V + + A + L K VH + +++++ VCN + YA
Sbjct: 339 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYA 398
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A VF + ++ ++SWN+M+ + D T+
Sbjct: 399 KCGSMEAANSVFSTM--VVKDIISWNTMIG---------------------ELKPDSRTM 435
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+L + AL +G+ +H + + G+ D V N L+ +Y KCG + AR+LFD I
Sbjct: 436 ACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
+ VSWT MI+GY G +EA+ F M AG PD V+ +S++ C SG LE G ++
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
F ++ + ++D+ S+ G++ A E LP W ++ GC
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGC 611
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 174/378 (46%), Gaps = 40/378 (10%)
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+D V+ N I + + DL+ A + C ++ +++S++ C F D
Sbjct: 62 IDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKV 121
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLIS 287
+ + N +D + L+S + L +GR V FD +V + N ++S
Sbjct: 122 HSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV--------FDTMEKKNVYLWNFMVS 173
Query: 288 MYSKCGDI--------------------DSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
Y+K GD +SA LFD +CDR +SW +MISGY G +
Sbjct: 174 EYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTE 233
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
L ++ M G DL T++S++ GC SG L LGK + A + + N L+
Sbjct: 234 RGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
DMYSKCG + A +F + E+ VVSWT+MIAG +G A+ L Q+ + ++ + V
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALD 505
++L AC +G L+ G + D + N E + + C A D+ + G ++ A
Sbjct: 354 AITSILHACARSGSLDNGKDVH-----DYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408
Query: 506 FVQSMPIKSDAGIWGTLL 523
+M +K D W T++
Sbjct: 409 VFSTMVVK-DIISWNTMI 425
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 196/631 (31%), Positives = 319/631 (50%), Gaps = 19/631 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN + E ++LLLF QM + I P+ + K LS + H
Sbjct: 374 NVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAH 433
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G++VK S + K + +D A +FD M +D SWN+++ G G
Sbjct: 434 GYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNS 493
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M + G + D T++ + A + + + + VH + + G+ + S+ N +
Sbjct: 494 EAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALL 553
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+ C D +F + ++ VVSW +M+ T FD + M+ +G + D
Sbjct: 554 DMYSNCSDWHSTNQIFRNMAQK--NVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPD 611
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
V V S+L F E+L QG+ VH + I G + + V N L+ MY C +++ AR++FD
Sbjct: 612 VFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFD 671
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ ++ +SW +I GY++ +E+ LF M + P+ VT+ ++ +LE
Sbjct: 672 HVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFK-PNTVTMTCILPAVASISSLER 730
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ YA G ++ NAL+DMY KCG++ AR LF L +K ++SWT MIAG +
Sbjct: 731 GREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGM 790
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G +A+ LF Q+ + P+ +F A+L AC H+G +GW K P+
Sbjct: 791 HGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGW--KFFNAMRKEYKIEPK 848
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
L HY+C+ DLL G LKEA +F++SMPI+ D+ IW +LL C+IH ++++ E VA +F
Sbjct: 849 LKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVF 908
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
KLEP + YV +AN YA RW+ V ++ + +++ G S + GK F A++
Sbjct: 909 KLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADN 968
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKW 634
R H E LD +A REE + K+
Sbjct: 969 RNHPEWNRIAEFLDHVARRMREEGHDPKKKY 999
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 224/474 (47%), Gaps = 31/474 (6%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I + + + LF +M E +++T + ACA+L + +++HG+
Sbjct: 266 SWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYS 325
Query: 81 VKSP-----------------------FVKCDRLDCAYKIFDEMAVR-DVASWNAMLVGF 116
+KS +VKC + A ++FD M + +V WN ++ G+
Sbjct: 326 MKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGY 385
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
A+ E L LF M +GI D + L + H + + +G
Sbjct: 386 AKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQC 445
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+VCN IS YAK + + A LVF +R+ + +SWNS+++GCT +++ +
Sbjct: 446 AVCNALISFYAKSNMIDNAVLVF----DRMPHQDTISWNSVISGCTSNGLNSEAIELFVR 501
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M G LD TT++S+L + GR+VH + + G + S+ N L+ MYS C D
Sbjct: 502 MWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSD 561
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
S +F + + VSWTAMI+ Y + G D+ L M G PD+ V S++ G
Sbjct: 562 WHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHG 621
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
+L+ GK YA G++ + V NAL++MY C ++ +AR +F + K ++SW
Sbjct: 622 FAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISW 681
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
T+I G + N E+ LF ++ L +PN VT +L A LE+G I
Sbjct: 682 NTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREI 734
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 215/491 (43%), Gaps = 30/491 (6%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFI 60
M +PPR+ + + W S + + + + LFRQM+ + P+ +
Sbjct: 151 MVFDEMPPRV------ADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCV 204
Query: 61 AKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDV 106
K A L + ++IHG + K + + +C ++ A ++FD M RD
Sbjct: 205 LKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDA 264
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
SWN+ + G+ G+ + + LF M G + VTV+ + A + K VH +
Sbjct: 265 ISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGY 324
Query: 167 GIHIGVDADVSVCNTWISS---------YAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ G+ D+ + I Y KC D+ A VF + + V WN ++
Sbjct: 325 SMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHV-WNLIMG 383
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G +F++SL + M G D + LL C G + H + + GF
Sbjct: 384 GYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGT 443
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+V N LIS Y+K ID+A ++FD + + +SW ++ISG G EA+ LF M
Sbjct: 444 QCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMW 503
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G D T+LS++ C +S +G+ Y+ GL + NAL+DMYS C
Sbjct: 504 MQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWH 563
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
++F + +K VVSWT MI G F + L +++ ++P+ +VL
Sbjct: 564 STNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFA 623
Query: 458 HTGFLEKGWAI 468
L++G ++
Sbjct: 624 GDESLKQGKSV 634
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 205/432 (47%), Gaps = 34/432 (7%)
Query: 85 FVKCDRLDCAYKIFDEMAVR--DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
++KC L A +FDEM R DV W +++ +A+ G + + LF M+ G+ D
Sbjct: 140 YLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAH 199
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
V + + ++ + +H +G+ +V N I+ Y++C ++ A VF +
Sbjct: 200 AVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM 259
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R +SWNS ++G D +++ + M G + TV+S+L + C E +
Sbjct: 260 HA--RDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPA--CAELGFE 315
Query: 263 --GRLVHSHGIHYGFDLDVSVINT---------LISMYSKCGDIDSARVLFDGICDRTRV 311
G++VH + + G D+ + + L+ MY KCGD+ SAR +FD + + V
Sbjct: 316 LVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNV 375
Query: 312 S-WTAMISGYAQKGDLDEALRLFFAMEAAGELPD---LVTVLSMIS--GCGQSGALELGK 365
W ++ GYA+ + +E+L LF M G PD L +L I+ C + G + G
Sbjct: 376 HVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHG- 434
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
Y G VCNALI Y+K I +A +F +P + +SW ++I+GC NG
Sbjct: 435 ----YLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNG 490
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT-----GFLEKGWAISIIQYDDKGISY 480
EA++LF ++ + T L+VL AC + G + G+++ + ++
Sbjct: 491 LNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLA- 549
Query: 481 NPELDHYSCMAD 492
N LD YS +D
Sbjct: 550 NALLDMYSNCSD 561
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 168/370 (45%), Gaps = 22/370 (5%)
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q G L LRL + VG+++ V Q + L + H+ + G +
Sbjct: 75 QAGDLAAALRLLGSDGGVGVRSYCAVV----QLCGEERSLEAARRAHAL-VRAGTGGIIG 129
Query: 178 --VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ + +Y KC DL A +VF + R+ V W S+++ F + ++ +R M
Sbjct: 130 SVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQM 189
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G D V +L ++ +G ++H G +V N LI++YS+CG +
Sbjct: 190 QCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCM 249
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ A +FD + R +SW + ISGY G D A+ LF M + G VTVLS++ C
Sbjct: 250 EDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPAC 309
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALID---------MYSKCGSIGDARELFYAL 406
+ G +GK Y+ GL ++ + ID MY KCG +G AR +F A+
Sbjct: 310 AELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAM 369
Query: 407 PEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ-----ACTHTG 460
P K V W ++ G A EF E+L LF Q+ EL + P+ +L+ +C G
Sbjct: 370 PSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDG 429
Query: 461 FLEKGWAISI 470
+ G+ + +
Sbjct: 430 LVAHGYLVKL 439
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 10/248 (4%)
Query: 285 LISMYSKCGDIDSARVLFDGICDR---TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
L+ Y KCGD+ AR++FD + R RV WT+++S YA+ GD E + LF M+ G
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRV-WTSLMSAYAKAGDFQEGVSLFRQMQCCGV 194
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
PD V ++ G++ G+ GL + V NALI +YS+CG + DA +
Sbjct: 195 SPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQ 254
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F ++ + +SW + I+G NG A+DLF ++ + VT L+VL AC GF
Sbjct: 255 VFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314
Query: 462 LEKGWAI------SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
G + S + +D + + + S + + + G + A +MP K +
Sbjct: 315 ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374
Query: 516 AGIWGTLL 523
+W ++
Sbjct: 375 VHVWNLIM 382
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 305/575 (53%), Gaps = 23/575 (4%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKS-----PFVK-----------CDRLDCAYKIFDEMA 102
I + C DL Q +H H++K+ P + D +D A IF+ +
Sbjct: 26 LILQQCKTPKDL---QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHID 82
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
+ +++N M+ G A +N L LF M +Q D T + +A K L +
Sbjct: 83 KPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQ 142
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH+ + G ++ V NT I YA C + +A VF G+ ER ++V+WNSM++G T
Sbjct: 143 VHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPER--SIVAWNSMLSGYTKN 200
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+D+ + +R ++ D T++S+L + L G L+ + + G + ++
Sbjct: 201 GLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLT 260
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+LI MY+KCG +D+AR LFD + R V+W+AMISGYAQ EAL LF M+
Sbjct: 261 TSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVY 320
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ VT++S++ C GA E GKW Y +K V + LID Y+KCG I + E+
Sbjct: 321 PNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEV 380
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + K V +WT +I G A NGE AL+ F ++E D++PN VTF+ VL AC+H +
Sbjct: 381 FKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLV 440
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
++G + D I P ++HY CM D+LGR G L+EA F+ +MP +A +W TL
Sbjct: 441 DQGRHLFNSMRRDFDIE--PRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTL 498
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L +C+ H NIE+ E + +LEP + Y+ ++N YAL GR + +R+++K ++K
Sbjct: 499 LASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIK 558
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
K PG SL ++G F +ED H S+ + LD
Sbjct: 559 KIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALD 593
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 201/416 (48%), Gaps = 18/416 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N IR K LLLF++M + ++ + TF + KAC+++ L + +H I+
Sbjct: 89 YNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALIL 148
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F C ++ A +FD M R + +WN+ML G+ + G + V++
Sbjct: 149 KSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVK 208
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + + I+ D VT++ + A +L + + + + + G+ + ++ + I YA
Sbjct: 209 LFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYA 268
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F +++ R VV+W++M++G D+ ++LN + M + T+
Sbjct: 269 KCGQVDTARKLFDEMDK--RDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS+L S A G+ VH + L V++ LI Y+KCG ID + +F +
Sbjct: 327 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSF 386
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-W 366
+ +WTA+I G A G+ AL F +M P+ VT + ++S C + ++ G+
Sbjct: 387 KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
F++ ++ + ++D+ + G + +A + +P V W T++A C
Sbjct: 447 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASC 502
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 139/305 (45%), Gaps = 21/305 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+I WNS + + + LFR++ + IE +++T + AC +L++L ++I
Sbjct: 186 SIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIG 245
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+IV + KC ++D A K+FDEM RDV +W+AM+ G+AQ +
Sbjct: 246 EYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCK 305
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L LF+ M+ + + VT++ + + K VH + + V++ I
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLI 365
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + + VF E + V +W +++ G + +L F+ M+ N + +
Sbjct: 366 DFYAKCGYIDRSVEVF--KEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPN 423
Query: 244 VTTVVSLLSSFVCPEALV--QGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
T + +LS+ C A + QGR L +S + + + ++ + + G ++ A
Sbjct: 424 DVTFIGVLSA--CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQ 481
Query: 301 LFDGI 305
D +
Sbjct: 482 FIDNM 486
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/611 (33%), Positives = 320/611 (52%), Gaps = 23/611 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI-- 80
++++R + +++ L F M P TF + K CA DL + +H +
Sbjct: 28 HARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAA 87
Query: 81 ------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ + + KC R A ++FD M VRD +WNA++ G+A+ G + +
Sbjct: 88 RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147
Query: 129 FYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
M+ G + D +T++ + A +A+ L+ + H+F I G++ V+V + +Y
Sbjct: 148 VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYC 207
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A +VF + + VSWN+M+ G ++L + M+ G +DVT V
Sbjct: 208 KCGDIRAARVVFDWMPTK--NSVSWNAMIDGYAQNGDSREALALFNRMVEEG--VDVTDV 263
Query: 248 VSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
L + C E L +G VH + G D +VSV+N LI+MYSKC +D A +FD +
Sbjct: 264 SVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL 323
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
RT+VSW AMI G AQ G ++A+RLF M+ PD T++S+I +
Sbjct: 324 DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR 383
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
W Y+ L +V V ALIDMY+KCG + AR LF + E+ V++W MI G +G
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHG 443
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
A++LF ++ + + PN TFL+VL AC+H G +++G +D G+ P ++
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGL--EPGME 501
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY M DLLGR GKL EA F+Q MP+ ++G +L ACK+H N+E+ E A +F+L
Sbjct: 502 HYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFEL 561
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
P +V +AN YA W VA +RT M++N ++K PG S+ + + TF +
Sbjct: 562 GPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTN 621
Query: 606 HAESELTYPVL 616
H +++ Y L
Sbjct: 622 HQQAKEIYSRL 632
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + LF +M+ +++P++ T + A A +SD + ++ IHG+ +
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC R++ A +F+ R V +WNAM+ G+ GF + +
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M+ +GI + T + + A HA
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHA 477
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/622 (31%), Positives = 332/622 (53%), Gaps = 24/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ +R E+ +TLL+++QM + P+ T+PF+ ++C+ S++ + + IHG++V
Sbjct: 93 FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F +C + A+++FD+ +V+D+ +++ Q E + R
Sbjct: 153 KLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFR 212
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M + D T L + + L K VH I + D+ V +S Y+
Sbjct: 213 VFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYS 272
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L A +F + E+ R V WN M+A K + L ++ M +G R D+ T
Sbjct: 273 KLRSLVDARKLFDKMPEKDRVV--WNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 330
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ ++SS + + G+ H+H + G D VSV N+LI MY +C +DSA +F+ + D
Sbjct: 331 LPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD 390
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
++ +SW+AMI GY + G AL LF M++ G D V +++++ GALE K+
Sbjct: 391 KSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYL 450
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY--ALPEKIVVSWTTMIAGCALNG 425
Y+ GL + AL+ Y+KCGSI A+ LF + +K ++ W +MI+ A +G
Sbjct: 451 HGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG 510
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPE 483
++ + L++++ + +P++VTFL +L AC ++G +EKG + + SY P
Sbjct: 511 DWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEF----FKEMTESYGCQPS 566
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+HY+CM +LLGR G + EA + V++MPIK DA +WG LL ACK+H ++ E+ A L
Sbjct: 567 QEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLI 626
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+EP +A Y+ ++N YA G+WDGVA +R+ ++ +KK PG S ING F D
Sbjct: 627 NMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVAD 686
Query: 604 RYHAESELTYPVLDCLALHSRE 625
+ H + Y +L L L +E
Sbjct: 687 QTHPRAGDIYTILGNLELEIKE 708
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 193/437 (44%), Gaps = 30/437 (6%)
Query: 52 PNNLTFPFIAKACAKLSDLIYS--------QMIHGHIV-----KSPFVKCDRLDC----- 93
P L FP L++S Q IH + ++P + +DC
Sbjct: 14 PIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLG 73
Query: 94 ----AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
+ ++F + ++ +NA+L + G E L ++ M + D T + +
Sbjct: 74 LLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLR 133
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ ++ +++H + + +G D V Y +C + + A +F ++R
Sbjct: 134 SCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLF---DKRSVKD 190
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYR---HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ W S + T G + D+ +R M+ D T +LL ++ ++V
Sbjct: 191 LGWPSSLT--TEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIV 248
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H I D+ V ++S+YSK + AR LFD + ++ RV W MI+ YA++G
Sbjct: 249 HCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKP 308
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
E L LF +M +G DL T L +IS Q ++ GK + G V V N+L
Sbjct: 309 TECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSL 368
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY +C + A ++F + +K V+SW+ MI G NG+ + AL LF ++ ++ +
Sbjct: 369 IDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADF 428
Query: 447 VTFLAVLQACTHTGFLE 463
V + +L A H G LE
Sbjct: 429 VIMINILPAFVHIGALE 445
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ W++ I+ V ++ L LF +MK + I+ + + I A + L + +H
Sbjct: 392 SVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLH 451
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGF 121
G+ +K + KC ++ A ++F+E + +D+ WN+M+ A G
Sbjct: 452 GYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGD 511
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+L+ M+ + D VT +GL A +++
Sbjct: 512 WSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNS 544
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 104/260 (40%), Gaps = 4/260 (1%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+ I +GF + ++ + LI Y+ G ++ + +F + D + A++ + G+
Sbjct: 46 IHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGE 105
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ L ++ M A PD T ++ C + G+ Y G +V A
Sbjct: 106 SERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATA 165
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L +MY +C +A +LF K + +++ N +F +++ L P+
Sbjct: 166 LAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPD 225
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
TF +L+ ++ + I K + +L + + L + L +A
Sbjct: 226 SFTFFNLLRFIAGLNSIQLAKIVHCIAIVSK---LSGDLLVNTAVLSLYSKLRSLVDARK 282
Query: 506 FVQSMPIKSDAGIWGTLLCA 525
MP K D +W ++ A
Sbjct: 283 LFDKMPEK-DRVVWNIMIAA 301
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 208/630 (33%), Positives = 333/630 (52%), Gaps = 31/630 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V ++ L LF++M++ + + TF + ++CA LS L +HGH +
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHAL 302
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F +KC+ L A K+F+ + ++ S+NA++VG+A+ L
Sbjct: 303 KTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALG 362
Query: 128 LFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F ++ G+ D V++ G +A A+ L L+ VH + +++ V N + Y
Sbjct: 363 MFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVANAILDMY 421
Query: 187 AKCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC L A LVF EE + R VSWN+++A + +L+ + M+ +G D
Sbjct: 422 GKCGALVEACLVF---EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEF 478
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L + +AL G +H+ I LD V LI MYSKCG ++ A L D +
Sbjct: 479 TYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRL 538
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++T VSW A+ISG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 539 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 598
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
L+ + + + L+DMYSKCG++ D + +F P + V+W M+ G A +G
Sbjct: 599 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 658
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL +F + +++PN TFLAVL+AC H G +EKG + G+ +P+L+
Sbjct: 659 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGL--DPQLE 716
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HYSC+ D++GR G++ +AL+ ++ MP ++DA IW TLL CKIH N+E+ E AY + +L
Sbjct: 717 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQL 776
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP +A YV ++N YA G W+ V +R MM+ N +KK PG S I + F D+
Sbjct: 777 EPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKA 836
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKWI 635
H S+ Y LD L + +KW+
Sbjct: 837 HPRSKEIYENLDVL---------TDEMKWV 857
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 238/524 (45%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ + K + +F QM + + TF + K+C+ L D IHG V
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV 201
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F KC +LDC+ + F M ++ SW+A++ G Q L L
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLE 261
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ G+ T + ++ L L +H + DV + + Y
Sbjct: 262 LFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYM 321
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC++L A+ +F + + S+N+++ G DK ++L +R + +G LD ++
Sbjct: 322 KCNNLSDAQKLFNSLPN--HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 379
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ + ++G VH + ++ V N ++ MY KCG + A ++F+ +
Sbjct: 380 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 439
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ + Q G+ ++ L LF M +G PD T S++ C AL G
Sbjct: 440 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEI 499
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
N L + V ALIDMYSKCG + A +L L E+ VVSW +I+G +L +
Sbjct: 500 HNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 559
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELD 485
EA F +++E+ + P+ T+ +L C + +E G I II+ + + +Y
Sbjct: 560 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--- 616
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G +++ + P + D W ++C H
Sbjct: 617 --STLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQH 657
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 199/453 (43%), Gaps = 61/453 (13%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEM 101
TF I + C+ L + H ++ + F +KC L+ A+K+FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 102 AVRDVASWNAMLVGFAQM--------------------------GFLEN-----VLRLFY 130
RD SWNAML G+A G+L N V+ +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLK------SVHSFGIHIGVDADVSVCNTWIS 184
M +G TV T A+ K S L+ +H + +G D DV + +
Sbjct: 164 QMGRMG------TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 217
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC L + F + E + VSW++++AGC D L ++ M G +
Sbjct: 218 MYAKCKKLDCSIQFFHSMPE--KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQ 275
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+T S+ S AL G +H H + F DV + + MY KC ++ A+ LF+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ-SGALEL 363
+ + S+ A+I GYA+ EAL +F ++ +G D V++ C G LE
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE- 394
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G + + N+ V NA++DMY KCG++ +A +F + + VSW +IA
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
NG + L LF +++ + P+ T+ +VL+AC
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC 487
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 213/440 (48%), Gaps = 18/440 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+ +N+ I ++ + L +FR ++++ + + ++ +ACA + + +H
Sbjct: 340 NLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVH 399
Query: 78 GHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G +KS + KC L A +F+EM RD SWNA++ Q G E
Sbjct: 400 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEE 459
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L LF M G++ D T + +A + L+ +H+ I + D V I
Sbjct: 460 KTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALI 519
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC ++ AE + + E +TVVSWN++++G + + +++ + M+ G D
Sbjct: 520 DMYSKCGMMEKAEKLHDRLAE--QTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 577
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T ++L + + G+ +H+ I D + +TL+ MYSKCG++ +++F+
Sbjct: 578 NFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFE 637
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+R V+W AM+ GYAQ G +EAL++F M+ P+ T L+++ CG G +E
Sbjct: 638 KAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEK 697
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
G +F + + GL + + ++D+ + G + A EL +P E V W T+++ C
Sbjct: 698 GLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSIC 757
Query: 422 ALNGEFVEALDLFHQLMELD 441
++G A + +++L+
Sbjct: 758 KIHGNVEVAEKAAYSILQLE 777
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 174/406 (42%), Gaps = 41/406 (10%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--------------- 205
K H+ I V V N I Y KC DL+ A VF G+ +R
Sbjct: 62 KQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGR 121
Query: 206 --------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
R VVSWNS+++G + ++ + M G D TT +L
Sbjct: 122 GDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVL 181
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
S E G +H + GFD DV + L+ MY+KC +D + F + ++ V
Sbjct: 182 KSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWV 241
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SW+A+I+G Q DL L LF M+ AG T S+ C AL LG +A
Sbjct: 242 SWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHA 301
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
+V++ A +DMY KC ++ DA++LF +LP + S+ +I G A + + +EAL
Sbjct: 302 LKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEAL 361
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
+F L + L + V+ +AC +G + G+S C+A
Sbjct: 362 GMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQV-------HGLSMKSLCQSNICVA 414
Query: 492 ----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
D+ G+ G L EA + M + DA W ++ A + + N E
Sbjct: 415 NAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEE 459
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 39/243 (16%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL G+ H+ I F V V N LI MY KC D++ A +FDG+ R VSW AM+
Sbjct: 56 KALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAML 115
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA--------LELGKW--- 366
GYA +GD+ A +LF AM D+V+ S+ISG +G L++G+
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPER----DVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTV 171
Query: 367 FDNY-------ACSG-----------------GLKDNVMVCNALIDMYSKCGSIGDAREL 402
FD +CS G +V+ +AL+DMY+KC + + +
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F+++PEK VSW+ +IAGC N + L+LF ++ + + ++ TF +V ++C L
Sbjct: 232 FHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSAL 291
Query: 463 EKG 465
G
Sbjct: 292 RLG 294
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 324/632 (51%), Gaps = 28/632 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+ WN+ V + + LF++M ++ I PN + I ACA L + + IH
Sbjct: 147 NVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIH 206
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G ++K + K ++ A +F ++A DV SWNA++ G +
Sbjct: 207 GLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCND 266
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L L M+ G + + T+ +A L + +HS I + +D+ +
Sbjct: 267 LALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC+ + A + + ++ +++WN++++G + D+++ + M +
Sbjct: 327 DMYSKCEMMDDARRAYDSMPKK--DIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFN 384
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
TT+ ++L S +A+ + +H+ I G D VIN+L+ Y KC ID A +F+
Sbjct: 385 QTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFE 444
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
V++T+MI+ Y+Q GD +EAL+L+ M+ A PD S+++ C A E
Sbjct: 445 ERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQ 504
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK +A G ++ N+L++MY+KCGSI DA F +P + +VSW+ MI G A
Sbjct: 505 GKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQ 564
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-----GI 478
+G EAL LF+Q++ + PN +T ++VL AC H G + +G QY +K GI
Sbjct: 565 HGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGK-----QYFEKMEVMFGI 619
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
P +HY+CM DLLGR GKL EA++ V S+P ++D +WG LL A +IH NIE+G+
Sbjct: 620 --KPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKA 677
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A LF LEP + +V +AN YA G W+ VA +R MK ++VKK PG S I K T
Sbjct: 678 AKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYT 737
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
F DR H+ S+ Y LD L + YSS
Sbjct: 738 FIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSS 769
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 200/380 (52%), Gaps = 3/380 (0%)
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
+ H+V + + KC R A K+ DE + DV SW+++L G+ Q GF+E L +F M L+
Sbjct: 18 LRNHLV-TLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLL 76
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G++ + T + +A + L++ + VH + G ++D V NT + YAKC L +
Sbjct: 77 GVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDS 136
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
+F GI E R VVSWN++ + + +++ ++ M+ +G + ++ +L++
Sbjct: 137 RRLFGGIVE--RNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA 194
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
+ GR +H + G DLD N L+ MYSK G+I+ A +F I VSW A
Sbjct: 195 GLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNA 254
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+I+G D AL L M+ +G P++ T+ S + C G ELG+ +
Sbjct: 255 IIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMD 314
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
++ L+DMYSKC + DAR + ++P+K +++W +I+G + G+ ++A+ LF
Sbjct: 315 AHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFS 374
Query: 436 QLMELDLRPNRVTFLAVLQA 455
++ D+ N+ T VL++
Sbjct: 375 KMFSEDIDFNQTTLSTVLKS 394
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 220/463 (47%), Gaps = 16/463 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+S + V + LL+F +M ++ N TFP + KAC+ DL + +HG V
Sbjct: 50 WSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAV 109
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC LD + ++F + R+V SWNA+ + Q +
Sbjct: 110 VTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVG 169
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI + ++ + A + L + +H + +G+D D N + Y+
Sbjct: 170 LFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYS 229
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K +++ A VF I VVSWN+++AGC D D +L M +G R ++ T+
Sbjct: 230 KAGEIEGAVAVFQDIAH--PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTL 287
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L + GR +HS I D+ L+ MYSKC +D AR +D +
Sbjct: 288 SSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPK 347
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++W A+ISGY+Q GD +A+ LF M + + T+ +++ A+++ K
Sbjct: 348 KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQI 407
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G+ + V N+L+D Y KC I +A ++F + +V++T+MI + G+
Sbjct: 408 HTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDG 467
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
EAL L+ Q+ + D++P+ ++L AC + E+G + +
Sbjct: 468 EEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHV 510
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 177/374 (47%), Gaps = 13/374 (3%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ I G D S+ N ++ Y+KC A + E VVSW+S+++G
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLV--DESSELDVVSWSSLLSGYVQN 60
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+++L + M G + + T S+L + L GR VH + GF+ D V
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NTL+ MY+KCG +D +R LF GI +R VSW A+ S Y Q EA+ LF M +G +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ ++ +++ C +LG+ GL + NAL+DMYSK G I A +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + VVSW +IAGC L+ AL L ++ RPN T + L+AC GF
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 463 EKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
E G + S+I+ D + +L + D+ + + +A SMP K D W
Sbjct: 301 ELGRQLHSSLIKMD-----AHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWN 354
Query: 521 TLLCA---CKIHLN 531
L+ C HL+
Sbjct: 355 ALISGYSQCGDHLD 368
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 219/656 (33%), Positives = 332/656 (50%), Gaps = 58/656 (8%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP---------NNLTFPFIAKACAKL 67
S I +WN +I + K + L +F M++ +N F K K+
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
D +I +++ S +VK L A +F++M +DV SWNAML GFAQ GF+E +
Sbjct: 118 PD---RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M + + ++ GL A + + + + +D ++ N + Y
Sbjct: 175 IFDQM----LVKNEISWNGLLSAYVQNGRIEDARRL----FDSKMDWEIVSWNCLMGGYV 226
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ L A +F + +R +SWN M+ G ++ + + DV
Sbjct: 227 RKKRLDDARSLFDRMP--VRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAW 280
Query: 248 VSLLSSFV--------------CPE-------ALVQGRLVHSHGIHYGFDL-------DV 279
+++S FV PE A++ G V S I +L +
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAG-YVQSQQIEKARELFDQMPSRNT 339
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
S NT+++ Y++CG+ID A++LFD + R +SW AMISGYAQ G +EAL LF M+
Sbjct: 340 SSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRD 399
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G + + + +S C + ALELGK G + + NAL+ MY KCGSI +A
Sbjct: 400 GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEA 459
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
++F + EK +VSW TMIAG A +G EAL LF M++ ++P+ VT + VL AC+HT
Sbjct: 460 FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES-MKMTIKPDDVTLVGVLSACSHT 518
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
GF++KG Y + GI+ N + HY+CM DLLGR G+L EAL+ ++SMP DA W
Sbjct: 519 GFVDKGMEYFNSMYQNYGITANAK--HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATW 576
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
G LL A +IH + E+GE A +F++EP ++ YV ++N YA GRW V +R+ M+
Sbjct: 577 GALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
VKK PG S I KT FT D H E+E Y L+ L L +++ + S K +
Sbjct: 637 GVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLV 692
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 186/445 (41%), Gaps = 103/445 (23%)
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
VD+D+ N IS+Y + + A VF G+ R R+ V++N+M++G +KFD +
Sbjct: 56 VDSDIVKWNRKISAYMRKGQCESALSVFNGM--RRRSTVTYNAMISGYLSNNKFDCARKV 113
Query: 232 YRHM----------MYNGF-----------------RLDVTTVVSLLSSF---------- 254
+ M M +G+ DV + ++LS F
Sbjct: 114 FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEAR 173
Query: 255 -VCPEALVQ---------------GRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDS 297
+ + LV+ GR+ + + D ++ N L+ Y + +D
Sbjct: 174 KIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDD 233
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP--DLVTVLSMISGC 355
AR LFD + R ++SW MI+GYAQ G L EA RLF ELP D+ +M+SG
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF------EELPIRDVFAWTAMVSGF 287
Query: 356 GQSGAL-ELGKWFDNYACSGGLKDNVMVC--------------------------NALID 388
Q+G L E + F+ + N M+ N ++
Sbjct: 288 VQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVT 347
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
Y++CG+I A+ LF +P++ +SW MI+G A +G+ EAL LF ++ NR
Sbjct: 348 GYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSA 407
Query: 449 FLAVLQACTHTGFLEKGWAI--SIIQ--YDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
L +C LE G + +++ + I+ N L Y G+ G ++EA
Sbjct: 408 LACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMY-------GKCGSIEEAF 460
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
D + + K D W T++ H
Sbjct: 461 DVFEDITEK-DIVSWNTMIAGYARH 484
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 22/222 (9%)
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I D V W IS Y +KG + AL +F M VT +MISG + +
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS----TVTYNAMISGYLSNNKFDCA 110
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
K F+ +++ N ++ Y K G++ AR LF +PEK VVSW M++G A
Sbjct: 111 RKVFEKMP-----DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQ 165
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG EA +F Q+ L N +++ +L A G +E + + D + +S+N
Sbjct: 166 NGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWN-- 219
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
C+ RK +L +A MP++ D W ++
Sbjct: 220 -----CLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITG 255
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 196/606 (32%), Positives = 322/606 (53%), Gaps = 22/606 (3%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------- 84
+L LF QM++ ++ P+ + AC+ L L + IH ++++
Sbjct: 214 SLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLID 273
Query: 85 -FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+ KC+R+ K+FD+M V+++ SW M+ G+ Q F ++LF M +G + D
Sbjct: 274 FYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFA 333
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + + L + VH++ I +++D V N I YAK + L A+ VF +
Sbjct: 334 CTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMA 393
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
E+ V+S+N+M+ G + +K ++L + M F + T VSLL AL
Sbjct: 394 EQ--NVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELS 451
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ +H I +G LD+ + LI +YSKC + AR +F+ + ++ V W AM GY Q
Sbjct: 452 KQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQH 511
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+ +EAL+L+ ++ + + P+ T ++I+ +L G+ F N GL V
Sbjct: 512 LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 571
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NAL+DMY+KCGSI +AR++F + + VV W +MI+ A +GE EAL +F ++M+ ++
Sbjct: 572 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 631
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDD-KGISYNPELDHYSCMADLLGRKGKLKE 502
PN VTF+AVL AC+H G +E G + ++ G P +HY+C+ LLGR GKL E
Sbjct: 632 PNYVTFVAVLSACSHAGRVEDG----LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFE 687
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A +F++ MPI+ A +W +LL AC+I N+E+G+Y A +P + Y+ ++N +A
Sbjct: 688 AKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFAS 747
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
G W V +R M ++V K PG+S +N K F A D H E+++ VLD L H
Sbjct: 748 KGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREADIG-SVLDILIQH 806
Query: 623 SREEAY 628
+ Y
Sbjct: 807 IKGAGY 812
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 247/502 (49%), Gaps = 25/502 (4%)
Query: 49 DIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCA 94
++ P F + + + +I+ ++IHG I+ S K DR+D A
Sbjct: 22 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIH 153
+FD+M +++ +W++M+ ++Q G+ E L +F ++ R G + + + +A
Sbjct: 82 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 141
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ +H F + G D DV V + I Y+K +++ A LVF + E+ T V+W
Sbjct: 142 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK--TAVTWT 199
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+++AG T + SL + M D V S+LS+ E L G+ +H++ +
Sbjct: 200 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 259
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G ++DVSV+N LI Y+KC + + R LFD + + +SWT MISGY Q EA++LF
Sbjct: 260 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 319
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M G PD S+++ CG ALE G+ Y L+ + V N LIDMY+K
Sbjct: 320 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 379
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ DA+++F + E+ V+S+ MI G + + EAL+LFH++ P+ +TF+++L
Sbjct: 380 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 439
Query: 454 QACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
LE I II++ G+S +L S + D+ + +K+A + M
Sbjct: 440 GVSASLFALELSKQIHGLIIKF---GVSL--DLFAGSALIDVYSKCSYVKDARHVFEEMN 494
Query: 512 IKSDAGIWGTLLCACKIHLNIE 533
K D +W + HL E
Sbjct: 495 EK-DIVVWNAMFFGYTQHLENE 515
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 158/372 (42%), Gaps = 50/372 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I ++ + + L LF +M+ P+ LTF + A L L S+ IHG I+
Sbjct: 400 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 459
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC + A +F+EM +D+ WNAM G+ Q E L+
Sbjct: 460 KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 519
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ ++ + + T L AA + L + H+ + +G+D V N + YA
Sbjct: 520 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 579
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F R VV WNSM++ + +++L +R MM G + + T
Sbjct: 580 KCGSIEEARKMFNS--SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTF 637
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V++LS+ C A GR+ G+++ N++ K G
Sbjct: 638 VAVLSA--CSHA---GRV--EDGLNH--------FNSMPGFGIKPGT------------- 669
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++S + G L EA M P + S++S C +G +ELGK+
Sbjct: 670 ---EHYACVVSLLGRSGKLFEAKEFIEKMPIE---PAAIVWRSLLSACRIAGNVELGKYA 723
Query: 368 DNYACSGGLKDN 379
A S KD+
Sbjct: 724 AEMAISTDPKDS 735
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 206/634 (32%), Positives = 325/634 (51%), Gaps = 23/634 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
WN IR + LL + +M P+ TFP++ KAC L+ + +++H I
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 81 ---------VKSPFVKC-DRLDC---AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
V S +K C A +FD M +D WN ML G+ + G +N
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW--ISS 185
+F MR + VT + ++ +H + G++ D V NT+ I
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDI 294
Query: 186 YAKCDDLKMAELVFCGIEERLRT-VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC D++MA +F ++R +V +M++G +++L +R ++ R +
Sbjct: 295 YFKCRDVEMARKIF---DQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 351
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ S+L + AL G+ +H H + G V + ++ MY+KCG +D A F G
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIG 411
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I D+ V W +MI+ +Q G +EA+ LF M AG D V++ + +S C AL G
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 471
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K + G + ++ +ALIDMYSKCG++ A +F + EK VSW ++IA +
Sbjct: 472 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 531
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G ++L+LFH ++ ++P+ VTFLA++ AC H G +++G ++ GI +
Sbjct: 532 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM--ARM 589
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+CM DL GR G+L EA + SMP DAG+WGTLL AC++H N+E+ E + LF
Sbjct: 590 EHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFD 649
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P ++ YV ++N +A G+W+ V IR++MK V+K PG S +N T F A DR
Sbjct: 650 LDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADR 709
Query: 605 YHAESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
H +S Y +L L L R+E Y L ++P H
Sbjct: 710 SHPQSSQIYLLLKNLFLELRKEGYVPQL-YLPMH 742
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 217/487 (44%), Gaps = 13/487 (2%)
Query: 47 QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDV 106
Q +P+ L+ A A ++ + Y+ ++ G + +V C A IF ++ +
Sbjct: 54 QTCTDPSGLSQGRQAHAQMLVNGIGYNGIL-GTKLLGMYVLCGAFLDAKNIFYQLRLWCS 112
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
WN M+ GF MG + L ++ M G D T + +A ++L + VH
Sbjct: 113 EPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDK 172
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDK 224
+G + DV V ++ I Y++ + A +F +R+ + V WN M+ G
Sbjct: 173 IQFMGFELDVFVGSSLIKFYSENGCIHDARYLF----DRMPSKDGVLWNVMLNGYVKNGD 228
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+D++ + M + T +LS + G +H + G ++D V NT
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 285 --LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
LI +Y KC D++ AR +FD V TAMISGY G + AL +F +
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
+ VT+ S++ C AL LGK + G + V +A++DMY+KCG + A +
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 408
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + +K V W +MI C+ NG+ EA+DLF Q+ + + V+ A L AC + L
Sbjct: 409 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 468
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
G I ++ +L S + D+ + G L A +M K++ W ++
Sbjct: 469 HYGKEIHAFMMRG---AFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVS-WNSI 524
Query: 523 LCACKIH 529
+ A H
Sbjct: 525 IAAYGNH 531
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 100/211 (47%)
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+VS+L + P L QGR H+ + G + + L+ MY CG A+ +F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
W MI G+ G D AL +F M G LPD T +I CG ++ LG+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G + +V V ++LI YS+ G I DAR LF +P K V W M+ G NG+
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+ A +F ++ + PN VTF VL C
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 11/183 (6%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P LV++L C L G+ G+ N ++ L+ MY CG+ DA+ +
Sbjct: 47 PQLVSILQT---CTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNI 103
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
FY L W MI G + G+F AL + +++ P++ TF V++AC +
Sbjct: 104 FYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSV 163
Query: 463 EKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
G + DK ELD + S + G + +A MP K D +W
Sbjct: 164 ALGRVV-----HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK-DGVLWN 217
Query: 521 TLL 523
+L
Sbjct: 218 VML 220
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 308/578 (53%), Gaps = 29/578 (5%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
F+ AK+ D S + +V+ ++ R + A+++FD++ RDV SWN+M+ G+
Sbjct: 170 FMVSEYAKIGDFKESICLFKIMVEKG-IEGKRPESAFELFDKLCDRDVISWNSMISGYVS 228
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G E L ++ M +GI D T++ + ++ LSL K+VHS I + ++
Sbjct: 229 NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
NT + Y+KC DL A VF + ER VVSW SM+AG T + D ++ + M
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGRSDGAIKLLQQMEKE 346
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G +LDV + S+L + +L G+ VH + + ++ V N L+ MY+KCG +++A
Sbjct: 347 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAA 406
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQ 357
+F + + +SW MI GEL PD T+ ++ C
Sbjct: 407 NSVFSTMVVKDIISWNTMI----------------------GELKPDSRTMACVLPACAS 444
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT M
Sbjct: 445 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 504
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG ++G EA+ F+++ + + P+ V+F+++L AC+H+G LE+GW I +D
Sbjct: 505 IAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFN 564
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I P+L+HY+CM DLL R G L +A +F++++PI DA IWG LLC C+ + +IE+ E
Sbjct: 565 IE--PKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEK 622
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA +F+LEP + YV +AN YA +W+ V +R + + ++K PG S I GK
Sbjct: 623 VAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVN 682
Query: 598 TF-TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
F + + H S+ +L + +EE + K+
Sbjct: 683 LFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKY 720
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 207/479 (43%), Gaps = 86/479 (17%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIF 98
L L + K+N N F K+ I+S I I +P D
Sbjct: 13 LTLNQNRKENFFSSQNGCFIHKPSLKTKIFSPIFSSCIPIRISATPTRTIDH-------- 64
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
V +NA ++ F Q+G LEN + L + ++ T + Q K +
Sbjct: 65 ------QVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFT 116
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL------------ 206
K VHS V D ++ +S YA C DLK VF +E++
Sbjct: 117 DGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 207 -------------------------------------RTVVSWNSMVAGCTYGDKFDDSL 229
R V+SWNSM++G + L
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
Y+ MMY G +D+ T++S+L L G+ VHS I F+ ++ NTL+ MY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
SKCGD+D A +F+ + +R VSWT+MI+GY + G D A++L ME G D+V +
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S++ C +SG+L+ GK +Y + ++ N+ VCNAL+DMY+KCGS+ A +F + K
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK 416
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++SW TMI +L+P+ T VL AC LE+G I
Sbjct: 417 DIISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEI 454
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 192/416 (46%), Gaps = 39/416 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I V+ + L +++QM I+ + T + CA L + +H +
Sbjct: 219 WNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KC LD A ++F++M R+V SW +M+ G+ + G + ++
Sbjct: 279 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIK 338
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G++ D V + + A + L K VH + +++++ VCN + YA
Sbjct: 339 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYA 398
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A VF + ++ ++SWN+M+ + D T+
Sbjct: 399 KCGSMEAANSVFSTM--VVKDIISWNTMIG---------------------ELKPDSRTM 435
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+L + AL +G+ +H + + G+ D V N L+ +Y KCG + AR+LFD I
Sbjct: 436 ACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
+ VSWT MI+GY G +EA+ F M AG PD V+ +S++ C SG LE G ++
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
F ++ + ++D+ S+ G++ A E LP W ++ GC
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGC 611
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 173/378 (45%), Gaps = 40/378 (10%)
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+D V+ N I + + DL+ A + C ++ ++ S++ C F D
Sbjct: 62 IDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKV 121
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLIS 287
+ + N +D + L+S + L +GR V FD +V + N ++S
Sbjct: 122 HSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRV--------FDTMEKKNVYLWNFMVS 173
Query: 288 MYSKCGDI--------------------DSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
Y+K GD +SA LFD +CDR +SW +MISGY G +
Sbjct: 174 EYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTE 233
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
L ++ M G DL T++S++ GC SG L LGK + A + + N L+
Sbjct: 234 RGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
DMYSKCG + A +F + E+ VVSWT+MIAG +G A+ L Q+ + ++ + V
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALD 505
++L AC +G L+ G + D + N E + + C A D+ + G ++ A
Sbjct: 354 AITSILHACARSGSLDNGKDVH-----DYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408
Query: 506 FVQSMPIKSDAGIWGTLL 523
+M +K D W T++
Sbjct: 409 VFSTMVVK-DIISWNTMI 425
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 307/575 (53%), Gaps = 28/575 (4%)
Query: 54 NLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFD 99
N P + KAC ++S + IHG ++K + +C ++ A +FD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 100 EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
+M RDV SW+ M+ ++ + L L M + ++ V ++ + ++ +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 160 LKSVHSFGI------HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
K++H++ I H+GV ++ + YAKC L +A +F G+ ++ TVVSW
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTAL----LDMYAKCGHLGLARQLFNGLTQK--TVVSWT 267
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+M+AGC ++ ++ + M + T++SL+ AL G+ +H++ +
Sbjct: 268 AMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN 327
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GF + +++ L+ MY KC DI +AR LFD +R + WTAM+S YAQ +D+A LF
Sbjct: 328 GFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 387
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M +G P VT++S++S C +GAL+LGKW +Y ++ + ++ AL+DMY+KC
Sbjct: 388 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKC 447
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G I A LF + + W +I G A++G EALD+F ++ ++PN +TF+ +L
Sbjct: 448 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLL 507
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G + +G + G+ P+++HY CM DLLGR G L EA + ++SMPIK
Sbjct: 508 HACSHAGLVTEGKKLFEKMVHTFGLV--PQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIK 565
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+ +WG L+ AC++H N ++GE A L ++EP + V M+N YA RW A +R
Sbjct: 566 PNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVR 625
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
MK +KK PG S+ +NG F D+ H +
Sbjct: 626 KTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQ 660
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 196/421 (46%), Gaps = 20/421 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ IR E L L R+M + P+ + + A +++ + +H +++
Sbjct: 163 WSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVI 222
Query: 82 KSP----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++ + KC L A ++F+ + + V SW AM+ G + LE
Sbjct: 223 RNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEG 282
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+LF M+ I + +T++ L L L K +H++ + G +++ +
Sbjct: 283 TKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDM 342
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC D++ A +F + R V+ W +M++ + D + N + M +G R
Sbjct: 343 YGKCSDIRNARALFDSTQN--RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKV 400
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+VSLLS AL G+ VHS+ ++D + L+ MY+KCGDI++A LF
Sbjct: 401 TIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 460
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG- 364
R W A+I+G+A G +EAL +F ME G P+ +T + ++ C +G + G
Sbjct: 461 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 520
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCAL 423
K F+ + GL + ++D+ + G + +A E+ ++P K + W ++A C L
Sbjct: 521 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 580
Query: 424 N 424
+
Sbjct: 581 H 581
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 18/320 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
T+ W + I + N + LF +M++ +I PN +T + C L +
Sbjct: 260 QKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQ 319
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H +I+++ F KC + A +FD RDV W AML +AQ
Sbjct: 320 LHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANC 379
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
++ LF MR G++ VT++ L A L L K VHS+ V+ D +
Sbjct: 380 IDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA 439
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YAKC D+ A +F IE R + WN+++ G +++L+ + M G +
Sbjct: 440 LVDMYAKCGDINAAGRLF--IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVK 497
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARV 300
+ T + LL + + +G+ + +H +G + ++ + + G +D A
Sbjct: 498 PNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHE 557
Query: 301 LFDGICDR-TRVSWTAMISG 319
+ + + + W A+++
Sbjct: 558 MIKSMPIKPNTIVWGALVAA 577
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 203/623 (32%), Positives = 320/623 (51%), Gaps = 22/623 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS I V + + + L LF +M+++ ++P+ +T + ACA + L +H H +
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC ++ A+K F ++ WN MLV + Q+ L +
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFE 449
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M++ G+ + T + + L L + +H+ I G +V VC+ I YA
Sbjct: 450 IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L +A + + E VVSW +M+AG D F ++L + M Y G + D
Sbjct: 510 KYGQLALALRILRRLPED--DVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGF 567
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S +S+ AL QG+ +H+ GF D+S+ N LIS+Y++CG I A + F+ I D
Sbjct: 568 ASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD 627
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SW +++SG AQ G +EAL++F M ++ T S IS ++ G+
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI 687
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G V N+LI +Y+K GSI DA F + E+ V+SW MI G + +G
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGISYNPELD 485
+EAL LF ++ + PN VTF+ VL AC+H G +++G + S+ + D P+ +
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHD----LVPKSE 803
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY C+ DLLGR G+L A+++++ MPI +DA IW TLL AC IH NIEIGE A+ L +L
Sbjct: 804 HYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLEL 863
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP +A YV ++N YA+ +W R +MK VKK PG+S + F A D+
Sbjct: 864 EPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKL 923
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H + Y + L + E Y
Sbjct: 924 HPLTNQIYEYIGHLNRRTSEIGY 946
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 243/541 (44%), Gaps = 28/541 (5%)
Query: 9 RLNRIYRSSTINQWNSQIREAVN---KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
+ N + R S + NS + + K + L M++ + N + ++ + C
Sbjct: 10 KTNNVVRVSGVGATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCL 69
Query: 66 KLSDLIYSQMIHGHIVKSPF----VKCDRL----------DCAYKIFDEMAVRDVASWNA 111
L + +H I KS F + D L A K+FDE + R V SWN
Sbjct: 70 TSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNK 129
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHI 170
M+ F V LF M GI + T G+ +A + + +K VHS +
Sbjct: 130 MIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYY 189
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G D+ V N I Y+K ++ A+ VF I ++ +V+W +M++G + ++++
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCI--CMKDIVTWVAMISGLSQNGLEEEAIL 247
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M + + S+LS+ + G +H I +GF + V N L+++YS
Sbjct: 248 LFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYS 307
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
+ + SA +F + R VS+ ++ISG Q+G D AL LF M+ PD +TV S
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVAS 367
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++S C GAL G ++A G+ ++++ +L+D+YSKC + A + F +
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETEN 427
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
+V W M+ ++ ++F Q+ + PN+ T+ ++L+ CT G L G
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE---- 483
Query: 471 IQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
Q I +L+ Y C + D+ + G+L AL ++ +P + D W ++
Sbjct: 484 -QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQ 541
Query: 529 H 529
H
Sbjct: 542 H 542
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 16/263 (6%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L R+ R + W + I V + + L LF +M+ I+ +N+ F AC
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
A + L Q IH + F +C R+ AY F+++ ++ SWN
Sbjct: 575 AGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWN 634
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
+++ G AQ G+ E L++F M + + T AA ++ + +HS +
Sbjct: 635 SLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT 694
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G D++ V N+ IS YAK + A F + E R V+SWN+M+ G + ++L
Sbjct: 695 GYDSEREVSNSLISLYAKSGSISDAWREFNDMSE--RNVISWNAMITGYSQHGCGMEALR 752
Query: 231 FYRHMMYNGFRLDVTTVVSLLSS 253
+ M G + T V +LS+
Sbjct: 753 LFEEMKVCGIMPNHVTFVGVLSA 775
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 316/590 (53%), Gaps = 21/590 (3%)
Query: 48 NDIEPNNLTFPFIAKA------------CAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAY 95
+ + P++ TFP + +A CA L++ + + +++ R+ AY
Sbjct: 63 HPLRPDSFTFPPLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAY 122
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++FDEM RDV +WNAML G + + + L M G+ D VT+ + +
Sbjct: 123 RVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLG 182
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+L +H + + G+ ++ VCN I Y K L A VF G+ LR +V+WNS+
Sbjct: 183 DRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMA--LRDLVTWNSI 240
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
++ G K ++ + MM +G DV T+VSL S+ + + VH + G+
Sbjct: 241 ISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGW 300
Query: 276 DL-DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
D+ D+ N ++ MY+K ID+A+ +FD + DR VSW +I+GY Q G +EA+R++
Sbjct: 301 DVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYN 360
Query: 335 AMEA-AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M G P T +S++ G L+ G + GL +V V LID+Y+KC
Sbjct: 361 DMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKC 420
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + +A LF +P + W +IAG ++G +AL LF Q+ + +++P+ VTF+++L
Sbjct: 421 GKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLL 480
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G +++G + + GI P HY+CM D+LGR G+L EA +F+QSMPIK
Sbjct: 481 AACSHAGLVDQGRSFFDLMQTVYGIV--PIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIK 538
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
D+ +WG LL AC+IH N+E+G+ + LF+L+P + YV M+N YA G+WDGV +R
Sbjct: 539 PDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVR 598
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTF---TAEDRYHAESELTYPVLDCLA 620
++++R ++K PG S + G F T + + E+ + D LA
Sbjct: 599 SLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLA 648
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 324/622 (52%), Gaps = 21/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + +L LF QM++ ++ P+ + AC+ L L + IH +++
Sbjct: 106 WTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 165
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC+R+ K+FD+M V+++ SW M+ G+ Q F ++
Sbjct: 166 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 225
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M +G + D + + + L + VH++ I ++++ V N I YA
Sbjct: 226 LFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYA 285
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + L A+ VF + E+ V+S+N+M+ G + +K ++L + M F + T
Sbjct: 286 KSNLLXDAKKVFDVMAEQ--NVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTF 343
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VSLL AL + +H I G LD+ + LI +YSKC + AR +F+ + +
Sbjct: 344 VSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE 403
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W AM GY Q + +EAL+L+ ++ + + P+ T ++I+ +L G+ F
Sbjct: 404 KDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQF 463
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
N GL V NAL+DMY+KCGSI +AR++F + + VV W +MI+ A +GE
Sbjct: 464 HNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEA 523
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD-KGISYNPELDH 486
EAL +F ++M+ ++PN VTF+AVL AC+H G +E G + ++ G P +H
Sbjct: 524 EEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDG----LNHFNSMPGFGIKPGTEH 579
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+C+ LLGR GKL EA +F++ MPI+ A +W +LL AC+I N+E+G+Y A +
Sbjct: 580 YACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTD 639
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + Y+ ++N +A G W V +R M ++V K PG+S +N K F A H
Sbjct: 640 PKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTH 699
Query: 607 AESELTYPVLDCLALHSREEAY 628
E+++ VLD L H + Y
Sbjct: 700 READMIGSVLDILIQHIKGAGY 721
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 241/511 (47%), Gaps = 23/511 (4%)
Query: 35 AHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF-------- 85
+ + L++F +++ E PN + +AC +L + +HG +V+S F
Sbjct: 17 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 76
Query: 86 ------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
K ++ A +FD++ + +W ++ G+ + G L LF MR +
Sbjct: 77 SLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVP 136
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D V + A + L K +H++ + G + DVSV N I Y KC+ +K +F
Sbjct: 137 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 196
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
+ ++ ++SW +M++G + FD +++ + M G++ D S+L+S E
Sbjct: 197 DQM--VVKNIISWTTMISGYMQ-NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL QGR VH++ I + + V N LI MY+K + A+ +FD + ++ +S+ AMI
Sbjct: 254 ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE 313
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY+ + L EAL LF M P L+T +S++ ALEL K G+
Sbjct: 314 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL 373
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ +ALID+YSKC + DAR +F + EK +V W M G + E EAL L+ L
Sbjct: 374 DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ 433
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+PN TF A++ A ++ L G Q G+ + P + + + D+ + G
Sbjct: 434 FSRQKPNEFTFAALITAASNLASLRHGQQFH-NQLVKMGLDFCPFVTN--ALVDMYAKCG 490
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++EA S I D W +++ H
Sbjct: 491 SIEEARKMFNS-SIWRDVVCWNSMISTHAQH 520
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 206/417 (49%), Gaps = 11/417 (2%)
Query: 120 GFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G+ E L +F ++ R G + + + +A + +H F + G D DV V
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ I Y+K B+++A LVF + E+ T V+W +++AG T + SL + M
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEK--TAVTWTTIIAGYTKCGRSXVSLELFAQMRET 132
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
D V S+LS+ E L G+ +H++ + G ++DVSV+N LI Y+KC + +
Sbjct: 133 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 192
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R LFD + + +SWT MISGY Q EA++LF M G PD S+++ CG
Sbjct: 193 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSL 252
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
ALE G+ Y L+ N V N LIDMY+K + DA+++F + E+ V+S+ MI
Sbjct: 253 EALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMI 312
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDK 476
G + + EAL+LFH++ P+ +TF+++L LE I II+
Sbjct: 313 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIK---X 369
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
G+S + L S + D+ + +K+A + M K D +W + HL E
Sbjct: 370 GVSLD--LFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENE 423
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 203/623 (32%), Positives = 320/623 (51%), Gaps = 22/623 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS I V + + + L LF +M+++ ++P+ +T + ACA + L +H H +
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC ++ A+K F ++ WN MLV + Q+ L +
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFE 449
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M++ G+ + T + + L L + +H+ I G +V VC+ I YA
Sbjct: 450 IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L +A + + E VVSW +M+AG D F ++L + M Y G + D
Sbjct: 510 KYGQLALALRILRRLPED--DVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGF 567
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S +S+ AL QG+ +H+ GF D+S+ N LIS+Y++CG I A + F+ I D
Sbjct: 568 ASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD 627
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SW +++SG AQ G +EAL++F M ++ T S IS ++ G+
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI 687
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G V N+LI +Y+K GSI DA F + E+ V+SW MI G + +G
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGISYNPELD 485
+EAL LF ++ + PN VTF+ VL AC+H G +++G + S+ + D P+ +
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHD----LVPKSE 803
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY C+ DLLGR G+L A+++++ MPI +DA IW TLL AC IH NIEIGE A+ L +L
Sbjct: 804 HYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLEL 863
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP +A YV ++N YA+ +W R +MK VKK PG+S + F A D+
Sbjct: 864 EPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKL 923
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H + Y + L + E Y
Sbjct: 924 HPLTNQIYEYIGHLNRRTSEIGY 946
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 243/521 (46%), Gaps = 21/521 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA------KLSDLI 71
++ WN I V + + LFR+M I PN TF + KAC +
Sbjct: 123 SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQV 182
Query: 72 YSQMIHGHIVKSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
+S+ + SP V K ++ A K+F+ + ++D+ +W AM+ G +Q G
Sbjct: 183 HSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
E + LF +M I + + A+ + L + +H I G ++ VCN
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
++ Y++ L AE +F + R VS+NS+++G D +L + M + +
Sbjct: 303 VALYSRSRKLISAERIFSTMNSR--DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D TV SLLS+ AL +G +HSH I G D+ + +L+ +YSKC D+++A F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
V W M+ Y Q +L ++ +F M+ G +P+ T S++ C GAL
Sbjct: 421 LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY 480
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
LG+ + G + NV VC+ LIDMY+K G + A + LPE VVSWT MIAG
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYV 540
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ F EAL LF ++ ++ + + F + + AC L +G I Y +
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY---AAGFGA 597
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+L + + L R G+++EA + + K++ W +L+
Sbjct: 598 DLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLV 637
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 243/541 (44%), Gaps = 28/541 (5%)
Query: 9 RLNRIYRSSTINQWNSQIREAVN---KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
+ N + R S + NS + + K + L M++ + N + ++ + C
Sbjct: 10 KTNNVVRVSGVGATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCL 69
Query: 66 KLSDLIYSQMIHGHIVKSPF----VKCDRL----------DCAYKIFDEMAVRDVASWNA 111
L + +H I KS F + D L A K+FDE + R V SWN
Sbjct: 70 TSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNK 129
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHI 170
M+ F V LF M GI + T G+ +A + + +K VHS +
Sbjct: 130 MIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYY 189
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G D+ V N I Y+K ++ A+ VF I ++ +V+W +M++G + ++++
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCI--CMKDIVTWVAMISGLSQNGLEEEAIL 247
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M + + S+LS+ + G +H I +GF + V N L+++YS
Sbjct: 248 LFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYS 307
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
+ + SA +F + R VS+ ++ISG Q+G D AL LF M+ PD +TV S
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVAS 367
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++S C GAL G ++A G+ ++++ +L+D+YSKC + A + F +
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETEN 427
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
+V W M+ ++ ++F Q+ + PN+ T+ ++L+ CT G L G
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE---- 483
Query: 471 IQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
Q I +L+ Y C + D+ + G+L AL ++ +P + D W ++
Sbjct: 484 -QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQ 541
Query: 529 H 529
H
Sbjct: 542 H 542
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 16/263 (6%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L R+ R + W + I V + + L LF +M+ I+ +N+ F AC
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
A + L Q IH + F +C R+ AY F+++ ++ SWN
Sbjct: 575 AGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWN 634
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
+++ G AQ G+ E L++F M + + T AA ++ + +HS +
Sbjct: 635 SLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT 694
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G D++ V N+ IS YAK + A F + E R V+SWN+M+ G + ++L
Sbjct: 695 GYDSEREVSNSLISLYAKSGSISDAWREFNDMSE--RNVISWNAMITGYSQHGCGMEALR 752
Query: 231 FYRHMMYNGFRLDVTTVVSLLSS 253
+ M G + T V +LS+
Sbjct: 753 LFEEMKVCGIMPNHVTFVGVLSA 775
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 339/639 (53%), Gaps = 40/639 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQ-MKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
++ + WNS I H + F + + + ++ ++ TFP + +AC L D
Sbjct: 102 QTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---G 158
Query: 74 QMIHGHIVKSPFVKCDR---------------LDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ +H ++K F +CD + A +FD M +RD+ +WNAM+ GF
Sbjct: 159 RKVHCLVLKLGF-ECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYL 217
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G + L +F MR + D VT+ L + + +H + I +G++ D+ V
Sbjct: 218 NGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFV 277
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
CN I+ YAK +L+ AE +F + ++R +VSWNS++A K +L Y M
Sbjct: 278 CNALINMYAKFGELRSAETIFN--QMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSI 335
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-------DVSVINTLISMYSK 291
G D+ T+VSL S V E G + S IH GF D+++ N +I MY+K
Sbjct: 336 GVVPDLLTLVSLAS--VAAEL---GNFLSSRSIH-GFVTRRCWFLHDIALGNAIIDMYAK 389
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-AGELPDLVTVLS 350
G IDSAR +F+G+ + +SW ++I+GY+Q G +EA+ ++ +M +G +P+ T +S
Sbjct: 390 LGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVS 449
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
+++ Q GAL+ G L ++ V L+DMY KCG + DA LFY +P +
Sbjct: 450 ILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQS 509
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAIS 469
VSW +I+ L+G ++A+ LF ++ ++P+ +TF+++L AC+H+G +++G W
Sbjct: 510 SVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQ 569
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++Q + GI P L HY CM DL GR G L++A +FV++MP++ D +WG LL AC+IH
Sbjct: 570 LMQ-ETYGI--RPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIH 626
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+E+ V+ L K+E + YV ++N YA G W+GV +R++ + +KK PG S
Sbjct: 627 ENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSS 686
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
++ K F ++ H + E Y L L + Y
Sbjct: 687 IEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGY 725
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 230/445 (51%), Gaps = 32/445 (7%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKH 156
FD++ +DV +WN+M+ +A++G + F + +Q+D T + +A +
Sbjct: 98 FDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRA---CGN 154
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + VH + +G + DV + ++I Y++ + +A +F + +R + +WN+M+
Sbjct: 155 LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNM--MIRDIGTWNAMI 212
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G K ++L + M + +D T+ SLL V + ++ G L+H + I G +
Sbjct: 213 SGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLE 272
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
D+ V N LI+MY+K G++ SA +F+ + R VSW ++++ + Q AL ++ M
Sbjct: 273 FDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKM 332
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDMY 390
+ G +PDL+T++S+ S A ELG + + + G + ++ + NA+IDMY
Sbjct: 333 HSIGVVPDLLTLVSL-----ASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMY 387
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTF 449
+K G I AR++F LP K V+SW ++I G + NG EA+D++ + PN+ T+
Sbjct: 388 AKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTW 447
Query: 450 LAVLQACTHTGFLEKGWA-----ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+++L A + G L++G I Y D +S +C+ D+ G+ GKL +AL
Sbjct: 448 VSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS--------TCLVDMYGKCGKLADAL 499
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
+P +S W ++ +H
Sbjct: 500 SLFYEVPHQSSVS-WNAIISCHGLH 523
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 12/244 (4%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-P 343
LI+ Y+ GDI AR+ FD I + +W +MIS YA+ G A+ F + L
Sbjct: 81 LINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQS 140
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T +I CG L+ G+ G + +V + + I YS+ G + A LF
Sbjct: 141 DHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLF 197
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ + + +W MI+G LNG+ EAL++F ++ + + VT ++L C +
Sbjct: 198 DNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDII 257
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
G I + I E D + C A ++ + G+L+ A M ++ D W +
Sbjct: 258 SGVLIHVY-----AIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR-DIVSWNS 311
Query: 522 LLCA 525
LL A
Sbjct: 312 LLAA 315
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G ++ + LI+ Y+ G I AR F + K V +W +MI+ A G F A+D F
Sbjct: 70 GKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCF 129
Query: 435 HQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMA 491
++ + L+ + TF V++AC G L+ G + + + E D Y +
Sbjct: 130 NEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLV-----LKLGFECDVYIAASFI 181
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
R G + A + +M I+ D G W ++ +LN ++ E
Sbjct: 182 HFYSRFGFVSLACNLFDNMMIR-DIGTWNAMISG--FYLNGKVAE 223
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 333/642 (51%), Gaps = 32/642 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + RS WN I ++ L F + EPN T + +AC L
Sbjct: 105 FNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGT 164
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
++HG+++KS F V D ++CA ++FDEM +DV +W+ M+ G
Sbjct: 165 KHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGG 223
Query: 116 FAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ Q + L++F M LV GI+ D V ++ + +A ++ + + VH IH G D
Sbjct: 224 YLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDC 283
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D+ V N+ I Y+KC D A VF I +R VSWNSM++G + + ++ +
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQR--NNVSWNSMLSGFVLNENYSEAQSLISS 341
Query: 235 MMYNGFRLDVTTVVSLLS---SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
M D T+V++L FV P + +H I G + + V++ LI Y+K
Sbjct: 342 MRKERVETDEVTLVNILQICKYFVHP---FHCKSIHCVMIRRGSEANELVLSALIDAYAK 398
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
C I+ A +F + R VSW+ MISG+A G DEA+ ++ M+ P+++T++++
Sbjct: 399 CYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINL 458
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C + L+ KW A G V V A++DMYSKCG I +R F L K +
Sbjct: 459 LEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNI 518
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
V+W+ MIA +NG EAL LF ++ L+PN VT L+VL AC+H G +E+G +S+
Sbjct: 519 VTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEG--LSLF 576
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIH 529
+ + + P +HYSCM D+LGR GKL A++ +++MP +K+ A IWG+LL AC+ +
Sbjct: 577 KSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSY 636
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
E+G+ + +LEP ++A Y+ ++ YA G WD A IR + K VK G SL
Sbjct: 637 GLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSL 696
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVL----DCLALHSREEA 627
HI+ K C F A D H S+ + + DC+ + ++E
Sbjct: 697 VHIDNKACRFVAGDGSHPRSDEIFSMAQQLHDCIKIDEKKEG 738
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 167/340 (49%), Gaps = 3/340 (0%)
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G + V+ ++ ++ GIQ V+V A KS+H+ I G D+ S+
Sbjct: 26 GKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFTSIG 85
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ + Y +C D +A VF + R R VSWN ++ G L ++ + G
Sbjct: 86 NSIMGFYIRCGDFDIAVDVFNSM-RRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAG 144
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
F +++T+V ++ + G ++H + I GF SV N+L+SMY D++ AR
Sbjct: 145 FEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECAR 203
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQS 358
LFD + ++ ++W+ MI GY Q + L++F M G PD V ++S++ C S
Sbjct: 204 ELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASS 263
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
+ G+ G ++ V N+LIDMYSKC G A ++F + ++ VSW +M+
Sbjct: 264 RDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSML 323
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
+G LN + EA L + + + + VT + +LQ C +
Sbjct: 324 SGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR-LDVTTVVSLLS--SFVCPEALVQGRLVH 267
+W + + K+ + ++ Y + G + +DV+ +L SF+ G+ +H
Sbjct: 14 NWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHR---HGKSLH 70
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGYAQKGDL 326
+ I GFD S+ N+++ Y +CGD D A +F+ + R VSW +I G+ G L
Sbjct: 71 ACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGAL 130
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
L F AG P++ T++ +I C G G Y G V N+L
Sbjct: 131 VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSL 190
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPN 445
+ MY + ARELF + EK V++W+ MI G E L +F +++ + + P+
Sbjct: 191 LSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249
Query: 446 RVTFLAVLQACTHT 459
V ++VL+AC +
Sbjct: 250 GVVMVSVLKACASS 263
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 333/642 (51%), Gaps = 32/642 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + RS WN I ++ L F + EPN T + +AC L
Sbjct: 105 FNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGT 164
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
++HG+++KS F V D ++CA ++FDEM +DV +W+ M+ G
Sbjct: 165 KHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGG 223
Query: 116 FAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ Q + L++F M LV GI+ D V ++ + +A ++ + + VH IH G D
Sbjct: 224 YLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDC 283
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D+ V N+ I Y+KC D A VF I +R VSWNSM++G + + ++ +
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQR--NNVSWNSMLSGFVLNENYSEAQSLISS 341
Query: 235 MMYNGFRLDVTTVVSLLS---SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
M D T+V++L FV P + +H I G + + V++ LI Y+K
Sbjct: 342 MRKERVETDEVTLVNILQICKYFVHP---FHCKSIHCVMIRRGSEANELVLSALIDAYAK 398
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
C I+ A +F + R VSW+ MISG+A G DEA+ ++ M+ P+++T++++
Sbjct: 399 CYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINL 458
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C + L+ KW A G V V A++DMYSKCG I +R F L K +
Sbjct: 459 LEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNI 518
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
V+W+ MIA +NG EAL LF ++ L+PN VT L+VL AC+H G +E+G +S+
Sbjct: 519 VTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEG--LSLF 576
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIH 529
+ + + P +HYSCM D+LGR GKL A++ +++MP +K+ A IWG+LL AC+ +
Sbjct: 577 KSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSY 636
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
E+G+ + +LEP ++A Y+ ++ YA G WD A IR + K VK G SL
Sbjct: 637 GLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSL 696
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVL----DCLALHSREEA 627
HI+ K C F A D H S+ + + DC+ + ++E
Sbjct: 697 VHIDNKACRFVAGDGSHPRSDEIFSMAQQLHDCIKIDEKKEG 738
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 167/340 (49%), Gaps = 3/340 (0%)
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G + V+ ++ ++ GIQ V+V A KS+H+ I G D+ S+
Sbjct: 26 GKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFTSIG 85
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ + Y +C D +A VF + R R VSWN ++ G L ++ + G
Sbjct: 86 NSIMGFYIRCGDFDIAVDVFNSM-RRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAG 144
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
F +++T+V ++ + G ++H + I GF SV N+L+SMY D++ AR
Sbjct: 145 FEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECAR 203
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQS 358
LFD + ++ ++W+ MI GY Q + L++F M G PD V ++S++ C S
Sbjct: 204 ELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASS 263
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
+ G+ G ++ V N+LIDMYSKC G A ++F + ++ VSW +M+
Sbjct: 264 RDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSML 323
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
+G LN + EA L + + + + VT + +LQ C +
Sbjct: 324 SGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR-LDVTTVVSLLS--SFVCPEALVQGRLVH 267
+W + + K+ + ++ Y + G + +DV+ +L SF+ G+ +H
Sbjct: 14 NWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHR---HGKSLH 70
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGYAQKGDL 326
+ I GFD S+ N+++ Y +CGD D A +F+ + R VSW +I G+ G L
Sbjct: 71 ACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGAL 130
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
L F AG P++ T++ +I C G G Y G V N+L
Sbjct: 131 VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSL 190
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPN 445
+ MY + ARELF + EK V++W+ MI G E L +F +++ + + P+
Sbjct: 191 LSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249
Query: 446 RVTFLAVLQACTHT 459
V ++VL+AC +
Sbjct: 250 GVVMVSVLKACASS 263
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 213/665 (32%), Positives = 317/665 (47%), Gaps = 89/665 (13%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI S+ WN+ +R + N A K LLL++ M +N++ P+N T+P + +ACA
Sbjct: 98 FDRIENSNGF-MWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 156
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH H++K F C + A K+FDE V D SWN++L G
Sbjct: 157 EFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAG 216
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ + G +E +F M I A
Sbjct: 217 YVKKGDVEEAKLIFDQMPQRNIVAS----------------------------------- 241
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
N+ I K + A +F ++E+ +VSW+++++G ++++L + M
Sbjct: 242 ----NSMIVLLGKMGQVMEAWKLFNEMDEK--DMVSWSALISGYEQNGMYEEALVMFIEM 295
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS----- 290
NG RLD VVS+LS+ + G+++H I G + V++ N LI MYS
Sbjct: 296 NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEI 355
Query: 291 --------------------------KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
KCG ++ AR LFD + ++ VSW+A+ISGYAQ
Sbjct: 356 MDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHD 415
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
E L LF M+ PD ++S+IS C AL+ GKW Y GLK NV++
Sbjct: 416 CFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGT 475
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
L+DMY KCG + +A E+F + EK V SW +I G A+NG +LD+F ++ + P
Sbjct: 476 TLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIP 535
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
N +TF+ VL AC H G +++G + GI P + HY CM DLLGR G L EA
Sbjct: 536 NEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIE--PNVKHYGCMVDLLGRAGLLNEAE 593
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
++SMP+ D WG LL ACK H + E+GE V L +L+P +V ++N +A G
Sbjct: 594 KLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKG 653
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
W+ V +R MMK+ V K PG SL NG F A D+ H +L+ +A +
Sbjct: 654 DWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLK 713
Query: 625 EEAYS 629
E Y+
Sbjct: 714 MEGYA 718
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 250/581 (43%), Gaps = 110/581 (18%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLF----------RQMKQ-ND 49
M++ L L+ + + S +NQ +S ++ N K + +KQ N
Sbjct: 1 MSLGVLTAHLS-LMKLSKLNQLSSALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNR 59
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASW 109
I + FI+ A L +S SPF+ LD + +IFD + + W
Sbjct: 60 ILSQMILTGFISDTFAASRLLKFS-------TDSPFIG---LDYSLQIFDRIENSNGFMW 109
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL----KSVHS 165
N M+ + Q E L L+ M + D T + QA + LL K +H
Sbjct: 110 NTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA----VRLLEFGGKEIHD 165
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDK 224
+ +G D+DV V NT I+ YA C +++ A +F E + VSWNS++AG GD
Sbjct: 166 HVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFD--ESPVLDSVSWNSILAGYVKKGDV 223
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+ L F + + Q +V S N+
Sbjct: 224 EEAKLIF--------------------------DQMPQRNIVAS--------------NS 243
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+I + K G + A LF+ + ++ VSW+A+ISGY Q G +EAL +F M A G D
Sbjct: 244 MIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLD 303
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS------------- 391
V V+S++S C ++ GK G++ V + NALI MYS
Sbjct: 304 EVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFN 363
Query: 392 ------------------KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
KCGS+ AR LF +PEK +VSW+ +I+G A + F E L L
Sbjct: 364 GSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLAL 423
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMAD 492
FH++ +RP+ ++V+ ACTH L++G W + I+ + G+ N L + + D
Sbjct: 424 FHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKN--GLKVNVILG--TTLLD 479
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ + G ++ AL+ M K + W L+ ++ +E
Sbjct: 480 MYMKCGCVENALEVFNGMEEKGVSS-WNALIIGLAVNGLVE 519
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 310/596 (52%), Gaps = 17/596 (2%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------------- 86
F +M+ I P+ + I + C L + M+H IV F
Sbjct: 158 FFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYA 217
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
K ++ +YK+F+ M +V SWNAM+ GF + LF M G+ D T +G
Sbjct: 218 KLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIG 277
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ +A + ++ K V + + +GVD++ V I +KC L+ A +F
Sbjct: 278 VAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITC 337
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R WN+M++G + +L + M N LD T S+ ++ + L G+ V
Sbjct: 338 RFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKV 397
Query: 267 HSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
H+ I G +++ VS+ N + + Y+KCG ++ R +F+ + DR +SWT++++ Y+Q +
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSE 457
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
D+A+ +F M A G P+ T S++ C LE G+ C GL + + +A
Sbjct: 458 WDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESA 517
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY+KCG +GDA+++F + VSWT +IAG A +G +AL LF ++++L + PN
Sbjct: 518 LVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPN 577
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
VTFL VL AC+H G +E+G + + K PE++HY+C+ DLL R G L +A++
Sbjct: 578 AVTFLCVLFACSHGGLVEEG--LQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAME 635
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+ MP++ + +W TLL AC++H N+E+GE A + + ++A YV ++N Y G
Sbjct: 636 FISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGS 695
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
+ ++R +MK VKK PG S +NG F A D+ H E + Y L+ L L
Sbjct: 696 YKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKL 751
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 21/426 (4%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSPFV----------------KCDRLDCAYKIFDEMAVRD 105
+ C L ++ +HG ++KS F KC +D A ++FD+M+ R+
Sbjct: 76 RDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRN 135
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
SW ++ G A+ G + F M+ GI D G+ Q I + L VH+
Sbjct: 136 TFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHA 195
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ G + V ++ YAK +++ + VF + E VVSWN+M+ G T D +
Sbjct: 196 QIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE--VNVVSWNAMITGFTSNDLY 253
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D+ + + MM G D T + + + + + + V + + G D + V L
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTAL 313
Query: 286 ISMYSKCGDIDSARVLFDG--ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
I M SKCG + AR +F+ I R W AMISGY + G ++AL LF M
Sbjct: 314 IDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYL 373
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDAREL 402
D T S+ + L LGK A GL+ N V + NA+ + Y+KCGS+ D R++
Sbjct: 374 DHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKV 433
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + ++ ++SWT+++ + E+ +A+++F + + PN+ TF +VL +C + L
Sbjct: 434 FNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLL 493
Query: 463 EKGWAI 468
E G +
Sbjct: 494 EYGQQV 499
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC--NTWISSYAKCDDLKMAELVFCG 201
++ L + + A+ L K+VH F + S+ N +Y+KC D+ A +F
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ +R SW ++AG F D F+ M G D +L + +++
Sbjct: 131 MSQR--NTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G +VH+ + GF V L++MY+K +I+ + +F+ + + VSW AMI+G+
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+A LF M G PD T + + G + K YA G+ N +
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL 308
Query: 382 VCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V ALIDM SKCGS+ +AR +F + + + W MI+G +G +AL+LF ++ +
Sbjct: 309 VGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ 368
Query: 440 LDLRPNRVTFLAVLQA 455
D+ + T+ +V A
Sbjct: 369 NDIYLDHYTYCSVFNA 384
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI--NTLISMYSKCGDIDSAR 299
L + +V LL V L Q + VH + F S++ N + YSKC DID+A
Sbjct: 66 LQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAAC 125
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LFD + R SWT +I+G A+ G + F M++ G PD ++ C
Sbjct: 126 RLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLD 185
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
++ELG G + V AL++MY+K I D+ ++F + E VVSW MI
Sbjct: 186 SIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMIT 245
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
G N +++A DLF ++M + P+ TF+ V +A
Sbjct: 246 GFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 22/295 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + K L LF +M QNDI ++ T+ + A A L L + +H +
Sbjct: 343 WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAI 402
Query: 82 KS---------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
KS + KC L+ K+F+ M RD+ SW +++ ++Q + +
Sbjct: 403 KSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAI 462
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F NMR GI + T + + + L + VH +G+D D + + + Y
Sbjct: 463 EIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMY 522
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC L A+ VF I VSW +++AG DD+L +R M+ G + T
Sbjct: 523 AKCGCLGDAKKVFNRISN--ADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVT 580
Query: 247 VVSLLSSFVCPE-ALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSA 298
+ +L F C LV+ L + + YG ++ ++ + S+ G ++ A
Sbjct: 581 FLCVL--FACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDA 633
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 218/656 (33%), Positives = 331/656 (50%), Gaps = 58/656 (8%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP---------NNLTFPFIAKACAKL 67
S I +WN +I + K + L +F M++ +N F K K+
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
D +I +++ S +VK L A +F++M +DV SWNAML GFAQ GF+E +
Sbjct: 118 PD---RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M + + ++ GL A + + + + +D ++ N + Y
Sbjct: 175 IFDQM----LVKNEISWNGLLSAYVQNGRIEDARRL----FDSKMDWEIVSWNCLMGGYV 226
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ L A +F + +R +SWN M+ G ++ + + DV
Sbjct: 227 RKKRLDDARSLFDRMP--VRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAW 280
Query: 248 VSLLSSFV--------------CPE-------ALVQGRLVHSHGIHYGFDL-------DV 279
+++S FV PE A++ G V S I +L +
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAG-YVQSQQIEKARELFDQMPSRNT 339
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
S NT+++ Y++CG+ID A++LFD + R +SW AMISGYAQ G +EAL LF M+
Sbjct: 340 SSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRD 399
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G + + + +S C + ALELGK G + + NAL+ MY KCGSI +A
Sbjct: 400 GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEA 459
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
++F + EK +VSW TMIAG A +G EAL LF M++ ++P+ VT + VL AC+HT
Sbjct: 460 FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES-MKMTIKPDDVTLVGVLSACSHT 518
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G ++KG Y + GI+ N + HY+CM DLLGR G+L EAL+ ++SMP DA W
Sbjct: 519 GLVDKGMEYFNSMYQNYGITANAK--HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATW 576
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
G LL A +IH + E+GE A +F++EP ++ YV ++N YA GRW V +R+ M+
Sbjct: 577 GALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
VKK PG S I KT FT D H E+E Y L+ L L +++ + S K +
Sbjct: 637 GVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLV 692
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 186/445 (41%), Gaps = 103/445 (23%)
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
VD+D+ N IS+Y + + A VF G+ R R+ V++N+M++G +KFD +
Sbjct: 56 VDSDIVKWNRKISAYMRKGQCESALSVFNGM--RRRSTVTYNAMISGYLSNNKFDCARKV 113
Query: 232 YRHM----------MYNGF-----------------RLDVTTVVSLLSSF---------- 254
+ M M +G+ DV + ++LS F
Sbjct: 114 FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEAR 173
Query: 255 -VCPEALVQ---------------GRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDS 297
+ + LV+ GR+ + + D ++ N L+ Y + +D
Sbjct: 174 KIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDD 233
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP--DLVTVLSMISGC 355
AR LFD + R ++SW MI+GYAQ G L EA RLF ELP D+ +M+SG
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF------EELPIRDVFAWTAMVSGF 287
Query: 356 GQSGAL-ELGKWFDNYACSGGLKDNVMVC--------------------------NALID 388
Q+G L E + F+ + N M+ N ++
Sbjct: 288 VQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVT 347
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
Y++CG+I A+ LF +P++ +SW MI+G A +G+ EAL LF ++ NR
Sbjct: 348 GYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSA 407
Query: 449 FLAVLQACTHTGFLEKGWAI--SIIQ--YDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
L +C LE G + +++ + I+ N L Y G+ G ++EA
Sbjct: 408 LACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMY-------GKCGSIEEAF 460
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
D + + K D W T++ H
Sbjct: 461 DVFEDITEK-DIVSWNTMIAGYARH 484
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 22/222 (9%)
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I D V W IS Y +KG + AL +F M VT +MISG + +
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS----TVTYNAMISGYLSNNKFDCA 110
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
K F+ +++ N ++ Y K G++ AR LF +PEK VVSW M++G A
Sbjct: 111 RKVFEKMP-----DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQ 165
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG EA +F Q+ L N +++ +L A G +E + + D + +S+N
Sbjct: 166 NGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWN-- 219
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
C+ RK +L +A MP++ D W ++
Sbjct: 220 -----CLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITG 255
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 310/596 (52%), Gaps = 17/596 (2%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------------- 86
F +M+ I P+ + I + C L + M+H IV F
Sbjct: 158 FFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYA 217
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
K ++ +YK+F+ M +V SWNAM+ GF + LF M G+ D T +G
Sbjct: 218 KLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIG 277
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ +A + ++ K V + + +GVD++ V I +KC L+ A +F
Sbjct: 278 VAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITC 337
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R WN+M++G + +L + M N LD T S+ ++ + L G+ V
Sbjct: 338 RFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKV 397
Query: 267 HSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
H+ I G +++ VS+ N + + Y+KCG ++ R +F+ + DR +SWT++++ Y+Q +
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSE 457
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
D+A+ +F M A G P+ T S++ C LE G+ C GL + + +A
Sbjct: 458 WDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESA 517
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY+KCG +GDA+++F + VSWT +IAG A +G +AL LF ++++L + PN
Sbjct: 518 LVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPN 577
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
VTFL VL AC+H G +E+G + + K PE++HY+C+ DLL R G L +A++
Sbjct: 578 AVTFLCVLFACSHGGLVEEG--LQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAME 635
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+ MP++ + +W TLL AC++H N+E+GE A + + ++A YV ++N Y G
Sbjct: 636 FISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGS 695
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
+ ++R +MK VKK PG S +NG F A D+ H E + Y L+ L L
Sbjct: 696 YKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKL 751
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 202/426 (47%), Gaps = 21/426 (4%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSPFV----------------KCDRLDCAYKIFDEMAVRD 105
+ C L ++ +HG ++KS F KC +D A ++FD+M+ R+
Sbjct: 76 RDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRN 135
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
SW ++ G A+ G + F M+ GI D G+ Q I + L VH+
Sbjct: 136 TFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHA 195
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ G + V ++ YAK +++ + VF + E VVSWN+M+ G T D +
Sbjct: 196 QIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE--VNVVSWNAMITGFTSNDLY 253
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D+ + + MM G D T + + + + + + V + + G D + V L
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTAL 313
Query: 286 ISMYSKCGDIDSARVLFDG--ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
I M SKCG + AR +F+ I R W AMISGY + G ++AL LF M
Sbjct: 314 IDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYL 373
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDAREL 402
D T S+ + L LGK A GL+ N V + NA+ + Y+KCGS+ D R++
Sbjct: 374 DHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKV 433
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + ++ ++SWT+++ + E+ +A+++F + + PN+ TF +VL +C + L
Sbjct: 434 FNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLL 493
Query: 463 EKGWAI 468
E G +
Sbjct: 494 EYGQQV 499
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC--NTWISSYAKCDDLKMAELVFCG 201
++ L + + A+ L K+VH F + S+ N +Y+KC D+ A +F
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ +R SW ++AG F D F+ M G D +L + +++
Sbjct: 131 MSQR--NTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G +VH+ + GF V L++MY+K +I+ + +F+ + + VSW AMI+G+
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+A LF M G PD T + + G + K YA G+ N +
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL 308
Query: 382 VCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V ALIDM SKCGS+ +AR +F + + + W MI+G +G +AL+LF ++ +
Sbjct: 309 VGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ 368
Query: 440 LDLRPNRVTFLAVLQA 455
D+ + T+ +V A
Sbjct: 369 NDIYLDHYTYCSVFNA 384
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI--NTLISMYSKCGDIDSAR 299
L + +V LL V L Q + VH + F S++ N + YSKC DID+A
Sbjct: 66 LQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAAC 125
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LFD + R SWT +I+G A+ G + F M++ G PD ++ C
Sbjct: 126 RLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLD 185
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
++ELG G + V AL++MY+K I D+ ++F + E VVSW MI
Sbjct: 186 SIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMIT 245
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
G N +++A DLF ++M + P+ TF+ V +A
Sbjct: 246 GFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA 281
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 22/295 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + K L LF +M QNDI ++ T+ + A A L L + +H +
Sbjct: 343 WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAI 402
Query: 82 KS---------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
KS + KC L+ K+F+ M RD+ SW +++ ++Q + +
Sbjct: 403 KSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAI 462
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F NMR GI + T + + + L + VH +G+D D + + + Y
Sbjct: 463 EIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMY 522
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC L A+ VF I VSW +++AG DD+L +R M+ G + T
Sbjct: 523 AKCGCLGDAKKVFNRISN--ADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVT 580
Query: 247 VVSLLSSFVCPE-ALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSA 298
+ +L F C LV+ L + + YG ++ ++ + S+ G ++ A
Sbjct: 581 FLCVL--FACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDA 633
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/565 (34%), Positives = 296/565 (52%), Gaps = 35/565 (6%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
SPF L A +F+ + + WN M+ G + + + M L G++ +
Sbjct: 77 SPF---GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSY 133
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T L ++ K +H + +G+++D V + I+ YA+ +L AELVF
Sbjct: 134 TFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKS 193
Query: 203 EER-----------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
R +R VSWN+M+AG +F+++L F++
Sbjct: 194 SLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQ 253
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M + +T+V++LS+ +L G V S +G ++ ++N LI MYSKCG
Sbjct: 254 EMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCG 313
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
D+D AR LF+GIC++ +SW MI GY+ EAL LF M+ + P+ VT +S++
Sbjct: 314 DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILP 373
Query: 354 GCGQSGALELGKWFDNYACSGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
C GAL+LGKW Y L N + +LIDMY+KCG+I A+++F + K +
Sbjct: 374 ACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SW MI+G A++G AL+LF Q+ + P+ +TF+ VL AC+H G +E G
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSM 493
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
+D IS P+L HY CM DLLGR G EA +++M +K D IWG+LL AC++H N+
Sbjct: 494 VEDYDIS--PKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNV 551
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
E+GE+ A LF+LEP + YV ++N YA GRWD VA IRT + +KK PG S +
Sbjct: 552 ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEV 611
Query: 593 NGKTCTFTAEDRYHAESELTYPVLD 617
+ F D+ H +S+ Y +LD
Sbjct: 612 DSVVHEFLVGDKVHEQSQDIYKMLD 636
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 200/409 (48%), Gaps = 40/409 (9%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWIS--SYAKCDDLKMAELVFCGIEERLRTVVSW 212
K LK +HS I G+ + I + + +L A L+F IE+ + + W
Sbjct: 43 KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFI--W 100
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N+M+ G + +++FY M+ G + T LL S A +G+ +H H +
Sbjct: 101 NTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLK 160
Query: 273 YGFDLDVSVINTLISMYSKCGDI-------------------------------DSARVL 301
G + D V +LI+MY++ G++ D AR L
Sbjct: 161 LGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRL 220
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ I R VSW AMI+GYAQ G +EAL F M+ A P+ T+++++S C QSG+L
Sbjct: 221 FEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSL 280
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
ELG W ++ GL N+ + NALIDMYSKCG + AR+LF + EK ++SW MI G
Sbjct: 281 ELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGY 340
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISY 480
+ + EAL LF ++ + ++ PN VTF+++L AC + G L+ G W I Y DK
Sbjct: 341 SHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW---IHAYIDKKFLG 397
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ + D+ + G ++ A M KS G W ++ +H
Sbjct: 398 LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS-LGSWNAMISGLAMH 445
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 168/383 (43%), Gaps = 37/383 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI----- 76
WN+ I + L F++MK+ ++ PN T + ACA+ L +
Sbjct: 232 WNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIE 291
Query: 77 -HG--------HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
HG + + + KC LD A +F+ + +D+ SWN M+ G++ M + L
Sbjct: 292 DHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALA 351
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF--GIHIGVDADVSVCNTWISS 185
LF M+ ++ + VT + + A + L L K +H++ +G+ + S+ + I
Sbjct: 352 LFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL-TNTSLWTSLIDM 410
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC +++ A+ VF G+ + +++ SWN+M++G + +L +R M GF D
Sbjct: 411 YAKCGNIEAAKQVFAGM--KPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 246 TVVSLLSSFVCPEA-LVQ-GRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T V +LS+ C A LV+ GR S + Y + +I + + G D A L
Sbjct: 469 TFVGVLSA--CSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALM 526
Query: 303 DGICDRTRVS-WTAMISGYAQKGDLDE---ALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ + + W +++ G+++ A + F +E E P +LS I
Sbjct: 527 KNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEP--ENPGAYVLLSNIYATA-- 582
Query: 359 GALELGKWFDNYACSGGLKDNVM 381
G+W D L D M
Sbjct: 583 -----GRWDDVARIRTKLNDKGM 600
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN I + N + L LFR+M+Q+++EPN++TF I ACA L L + IH
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 79 HIVKS---------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+I K + KC ++ A ++F M + + SWNAM+ G A G
Sbjct: 390 YIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHAN 449
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
L LF MR G + D +T +G+ A HA + L
Sbjct: 450 MALELFRQMRDEGFEPDDITFVGVLSACSHAGLVEL 485
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 206/642 (32%), Positives = 332/642 (51%), Gaps = 32/642 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTL-LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ I WNS + V + ++ + + + + P+ TFP + KAC L+D
Sbjct: 110 QRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---G 166
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H ++K F + ++ A+K+F +M VRDV SWNAM+ GF Q
Sbjct: 167 EKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQN 226
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G + LR+ M+ ++ D VTV + + + VH + I G+++DV V
Sbjct: 227 GNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVS 286
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I+ Y+K L+ A+ VF G+E +R +VSWNS++A D +L F++ M++ G
Sbjct: 287 NALINMYSKFGRLQDAQRVFDGME--VRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVG 344
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSA 298
R D+ TVVSL S F GR VH + ++D+ + N L++MY+K G ID A
Sbjct: 345 MRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCA 404
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQ 357
R +F+ + R +SW +I+GYAQ G EA+ + ME + P+ T +S++
Sbjct: 405 RAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSH 464
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
GAL+ G L +V V LIDMY KCG + DA LFY +P++ V W +
Sbjct: 465 VGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAI 524
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL-EKGWAISIIQYDDK 476
I+ ++G +AL LF + ++ + +TF+++L AC+H+G + E W +Q K
Sbjct: 525 ISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQ---K 581
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
P L HY CM DL GR G L++A + V +MPI++DA IWGTLL AC+IH N E+G
Sbjct: 582 EYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGT 641
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
+ + L +++ + YV ++N YA G+W+G +R++ + ++K PG S +
Sbjct: 642 FASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVV 701
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
F A ++ H + Y L L A L ++P++
Sbjct: 702 EVFYAGNQSHPQCAEIYEELRVL------NAKMKSLGYVPDY 737
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 234/444 (52%), Gaps = 16/444 (3%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQ 149
L + F + +++ SWN+M+ + + G + + + L G++ DF T + +
Sbjct: 99 LSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLK 158
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A + L+ + +H + + +G + DV V + I Y++ +++A VF ++ +R V
Sbjct: 159 ACL---SLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVF--VDMPVRDV 213
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
SWN+M++G ++L M ++D TV S+L +V G LVH +
Sbjct: 214 GSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLY 273
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I +G + DV V N LI+MYSK G + A+ +FDG+ R VSW ++I+ Y Q D A
Sbjct: 274 VIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTA 333
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS-GGLKDNVMVCNALID 388
L F M G PDL+TV+S+ S GQ +G+ + L+ ++++ NAL++
Sbjct: 334 LGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVN 393
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME-LDLRPNRV 447
MY+K GSI AR +F LP + V+SW T+I G A NG EA+D ++ + E + PN+
Sbjct: 394 MYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQG 453
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALD 505
T++++L A +H G L++G I + I LD + +C+ D+ G+ G+L++A+
Sbjct: 454 TWVSILPAYSHVGALQQGMKIH-----GRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMS 508
Query: 506 FVQSMPIKSDAGIWGTLLCACKIH 529
+P ++ W ++ + IH
Sbjct: 509 LFYEIPQETSVP-WNAIISSLGIH 531
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 161/298 (54%), Gaps = 6/298 (2%)
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
++++ K +H+ + +G DV + ++ YA DL ++ F I+ + + SWNSM
Sbjct: 63 NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRK--NIFSWNSM 120
Query: 216 VAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
V+ ++ DS++ ++ +G R D T +L + + +L G +H + G
Sbjct: 121 VSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKMHCWVLKMG 177
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
F+ DV V +LI +YS+ G ++ A +F + R SW AMISG+ Q G++ EALR+
Sbjct: 178 FEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLD 237
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M+ D VTV SM+ C QS + G Y GL+ +V V NALI+MYSK G
Sbjct: 238 RMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFG 297
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
+ DA+ +F + + +VSW ++IA N + V AL F +++ + +RP+ +T +++
Sbjct: 298 RLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSL 355
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 326/628 (51%), Gaps = 20/628 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ L ++ + + + P++ T + +AC L + +IHG I
Sbjct: 184 WNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIE 243
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + K + L +IFD+M +RD SWN M+ G++Q+G E ++
Sbjct: 244 KIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIK 303
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + + D +T+ + QA H L K VH + I G + D + N I+ YA
Sbjct: 304 LFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYA 362
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +L ++ VF G+ + + VSWNSM+ FD+++ ++ MM + D T
Sbjct: 363 KCGNLLASQEVFSGM--KCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTY 419
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V LLS L G+ +H GF+ ++ V NTL+ MY+KCG++ + +F+ +
Sbjct: 420 VMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA 479
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R ++W +I+ D + LR+ M G PD+ T+LS++ C A GK
Sbjct: 480 RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI 539
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
GL+ +V V N LI+MYSKCGS+ ++ ++F + K VV+WT +I+ C + GE
Sbjct: 540 HGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEG 599
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+A+ F ++ + P+ V F+A++ AC+H+G +E+G ++ K P ++HY
Sbjct: 600 KKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEG--LNYFHRMKKDYKIEPRIEHY 657
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R L +A DF+ SMP+K D+ IWG LL AC++ + EI E V+ + +L P
Sbjct: 658 ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNP 717
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
YV ++N YA G+WD V +IR +K +KK PG S I K F ++
Sbjct: 718 DDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFE 777
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWI 635
+ E +L LA +E Y ++L+++
Sbjct: 778 QFEEVNKLLGMLAGLMAKEGYIANLQFV 805
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 266/528 (50%), Gaps = 22/528 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S+ + WNS IR + + L L+ + ++ ++P+ TFP + ACA L D ++
Sbjct: 77 SNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 136
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++ F + + LD A K+F+EM +RDV SWN+++ G+ G+
Sbjct: 137 IHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 196
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L ++Y R +G+ D T+ + +A + +H IG+ DV V N
Sbjct: 197 WNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 256
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+S Y K + L +F + LR VSWN+M+ G + +++S+ + M+ N F+
Sbjct: 257 LLSMYCKFNGLIDGRRIFDKMV--LRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFK 313
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D+ T+ S+L + L G+ VH + I G++ D + N LI+MY+KCG++ +++ +
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F G+ + VSW +MI+ Y Q G DEA++LF M+ + PD VT + ++S Q G L
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVK-PDSVTYVMLLSMSTQLGDL 432
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
LGK G N++V N L+DMY+KCG +GD+ ++F + + +++W T+IA C
Sbjct: 433 HLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC 492
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+ + L + ++ + P+ T L++L C+ +G I + +
Sbjct: 493 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK---LGLE 549
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ + + ++ + G L+ + + M K D W L+ AC ++
Sbjct: 550 SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMY 596
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 19/317 (5%)
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T S+ + Q +HS I G V LI+ Y+ D S+ +F
Sbjct: 14 TLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 73
Query: 305 ICDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
V W ++I G EAL L+ + PD T S+I+ C E+
Sbjct: 74 ASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEM 133
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
K + G ++ + NALIDMY + + AR++F +P + VVSW ++I+G
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG + EAL+++++ L + P+ T +VL+AC G +E+G II + I +
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG---DIIHGLIEKIGIKKD 250
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+ + + + + L + M ++ DA W T++C Y
Sbjct: 251 VIVNNGLLSMYCKFNGLIDGRRIFDKMVLR-DAVSWNTMIC--------------GYSQV 295
Query: 544 KLEPHSAAPYVEMANKY 560
L S ++EM N++
Sbjct: 296 GLYEESIKLFMEMVNQF 312
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 332/624 (53%), Gaps = 40/624 (6%)
Query: 29 AVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--------- 78
+VN++ H +L +F + K D++PN+ T+ F A + D +IHG
Sbjct: 94 SVNES-PHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDS 152
Query: 79 ------HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM 132
+IVK F K R++ A K+FD M +D WN M+ G+ + +++F ++
Sbjct: 153 ELLLGSNIVKMYF-KFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 133 -RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
+ D T++ + A + L L +HS G + V +IS Y+KC
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+KMA +F E R +V++N+M+ G T + + SL+ ++ +M +G +L +T+VSL+
Sbjct: 272 IKMASTLFR--EFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLV 329
Query: 252 SSFVCPEALVQGRL-----VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V G L +H + + F SV L ++YSK +I+SAR LFD
Sbjct: 330 P--------VSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESP 381
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+++ SW AMISGY Q G ++A+ LF M+ + P+ VT+ ++S C Q GAL LGKW
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ S + ++ V ALI MY+KCGSI +AR LF +P+K V+W TMI+G L+G
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGH 501
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
EAL +F +++ + P VTFL VL AC+H G +++G I S+I + P +
Sbjct: 502 GQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR----YGFEPSV 557
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
HY+C+ D+LGR G L+ AL F+++MPI+ +W TLL AC+IH + + V+ LF+
Sbjct: 558 KHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFE 617
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P + +V ++N ++ + A +R K+ ++ K PG +L I FT+ D+
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 605 YHAESELTYPVLDCLALHSREEAY 628
H + + + L+ L RE Y
Sbjct: 678 SHPQVKAIHEKLEKLEGKMREAGY 701
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
H+ + +GF D+S++ L S G I AR +F + + ++ G++
Sbjct: 39 THAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 326 LDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+L +F + + +L P+ T IS G A G +++ +
Sbjct: 99 PHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGS 158
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-ELDLR 443
++ MY K + DAR++F +PEK + W TMI+G N +VE++ +F L+ E R
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
+ T L +L A L G I
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQI 243
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ I + LFR+M+ ++ PN +T I ACA+L L + +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + F KC + A ++FD M ++ +WN M+ G+ G +
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQ 503
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L +F M GI VT + + A HA
Sbjct: 504 EALTIFSEMLNSGIAPTPVTFLCVLYACSHA 534
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/621 (31%), Positives = 319/621 (51%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V + + L LF QM++ + + + + ++CA ++ L ++ +H H +
Sbjct: 205 WGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAI 264
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K D L A + F + V + NAM+VG + G L+
Sbjct: 265 KNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQ 324
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI D V++ G+ A K VH I G D DV V N + Y
Sbjct: 325 LFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYG 384
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A LVF +E+R VSWN+++A + ++D++ + M+ G D T
Sbjct: 385 KCKALVEAYLVFQEMEQR--DSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTY 442
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + ++L G +VH I G LD V +T++ MY KCG I A+ L D I
Sbjct: 443 GSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGG 502
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW ++ISG++ +EA + F M G PD T +++ C +ELGK
Sbjct: 503 QELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQI 562
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ + + + L+DMY+KCG++ D+ +F + VSW MI G AL+G+
Sbjct: 563 HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQG 622
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EAL++F ++ + ++ PN TF+AVL+AC+H G L+ G + + P+L+H+
Sbjct: 623 FEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKL--EPQLEHF 680
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM D+LGR +EAL F++SMP+++DA IW TLL CKI ++E+ E A + +L+P
Sbjct: 681 ACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDP 740
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ Y+ ++N YA G+W V+ R +M++ ++KK PG S + + F A D+ H
Sbjct: 741 DDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHP 800
Query: 608 ESELTYPVLDCLALHSREEAY 628
S Y +L+ L + + Y
Sbjct: 801 RSREVYEMLNNLIVEMKLSGY 821
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 231/524 (44%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + + ++ L +M + + P+ T + KAC L DL IH V
Sbjct: 104 WNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAV 163
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC L+ A + F M R+ SW A + G Q L
Sbjct: 164 KTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLE 223
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ +G+ + ++ LS + +H+ I AD V + YA
Sbjct: 224 LFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYA 283
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D L A F + TV + N+M+ G ++L ++ M +G DV ++
Sbjct: 284 KADSLVDARRAFFSLPN--HTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSL 341
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ S+ + +QG VH I GFD+DV V N ++ +Y KC + A ++F +
Sbjct: 342 SGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 401
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ Q ++ + M G PD T S++ C +LE G
Sbjct: 402 RDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVV 461
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A GL + V + ++DMY KCG I +A++L + + +VSW ++I+G +LN +
Sbjct: 462 HGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQS 521
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELD 485
EA F +++++ ++P+ T+ VL C + +E G I II+ + G Y
Sbjct: 522 EEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYIS--- 578
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G + ++L + K D W ++C +H
Sbjct: 579 --STLVDMYAKCGNMPDSLLMFEKAQ-KLDFVSWNAMICGYALH 619
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 190/412 (46%), Gaps = 9/412 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A +F M DV SWNA+L G+ Q G + + L M G+ D T+ L +A
Sbjct: 89 AASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGG 148
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ L+L +H+ + G++ DV + + Y KC L+ A F G+ ER VSW
Sbjct: 149 LEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGER--NSVSWG 206
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+ +AGC +++ L + M G + S+ S L R +H+H I
Sbjct: 207 AAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKN 266
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
F D V ++ +Y+K + AR F + + T + AM+ G + G EAL+LF
Sbjct: 267 KFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLF 326
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M +G D+V++ + S C + G A G +V V NA++D+Y KC
Sbjct: 327 QFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKC 386
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
++ +A +F + ++ VSW +IA N + + + ++++ + P+ T+ +VL
Sbjct: 387 KALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVL 446
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEA 503
+AC LE G S++ K I LD + S + D+ + G + EA
Sbjct: 447 KACAGLQSLEYG---SVVH--GKAIKSGLGLDAFVSSTVVDMYCKCGMITEA 493
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 202/451 (44%), Gaps = 22/451 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ N+ + V + L LF+ M ++ I + ++ + ACA++ + +H
Sbjct: 302 TVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVH 361
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+KS F KC L AY +F EM RD SWNA++ Q E
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ + M G++ D T + +A + L VH I G+ D V +T +
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVV 481
Query: 184 SSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
Y KC + A+ + +R+ + +VSWNS+++G + + +++ F+ M+ G +
Sbjct: 482 DMYCKCGMITEAQ----KLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVK 537
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T ++L + + G+ +H I D + +TL+ MY+KCG++ + ++
Sbjct: 538 PDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLM 597
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ VSW AMI GYA G EAL +F M+ A +P+ T ++++ C G L
Sbjct: 598 FEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLL 657
Query: 362 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
+ G ++F L+ + ++D+ + +A + ++P E V W T+++
Sbjct: 658 DDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLS 717
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
C + + A ++ LD + V L
Sbjct: 718 ICKIRQDVEVAETAASNVLRLDPDDSSVYIL 748
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 263 GRLVHSHGIHYGFDL----DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
G H+ G+ FD+ D NT+++ Y+ GD +A LF + D VSW A++S
Sbjct: 53 GGAAHARGV---FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLS 109
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY Q+G +++ L M G PD T+ ++ CG L LG A GL+
Sbjct: 110 GYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEM 169
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V +AL+DMY KC S+ DA F+ + E+ VSW IAGC N ++ L+LF Q+
Sbjct: 170 DVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQ 229
Query: 439 ELDLRPNRVTFLAVLQACT 457
L L ++ + +V ++C
Sbjct: 230 RLGLGVSQPAYASVFRSCA 248
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 40/209 (19%)
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR---------- 400
+ +G G+S AL G+ G V N L+ MY++CG AR
Sbjct: 11 LCAGAGRS-ALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRD 69
Query: 401 ---------------------ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
LF A+P+ VVSW +++G G F +++ L ++
Sbjct: 70 TVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMAR 129
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD--HYSCMADLLGRK 497
+ P+R T +L+AC L G +Q + E+D S + D+ G+
Sbjct: 130 RGVAPDRTTLAVLLKACGGLEDLALG-----VQIHAVAVKTGLEMDVRAGSALVDMYGKC 184
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
L++AL F M ++ WG + C
Sbjct: 185 RSLEDALRFFHGMGERNSVS-WGAAIAGC 212
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 322/603 (53%), Gaps = 24/603 (3%)
Query: 51 EPNNLTFPFIAKA------------CAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIF 98
P+ TFP + +A CA L+ + + +++ R+ AYK+F
Sbjct: 67 RPDGFTFPSLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVF 126
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
DEM+ RDV +WNAML G + + LF M G+ D VTV + +
Sbjct: 127 DEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQV 186
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
L +H + + G+D ++ VCN I Y K L+ A+ VF G+E R +V+WNS+++G
Sbjct: 187 LALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGME--CRDLVTWNSIISG 244
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
C + +L ++ M +G DV T+VSL S+ + +H + + G+D+D
Sbjct: 245 CEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVD 304
Query: 279 -VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+ N ++ MY+K +I++A+ +FD + + VSW +I+GY Q G +EA+ + M+
Sbjct: 305 DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ 364
Query: 338 AAGELPDLV-TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
L + T +S++ GAL+ G + GL +V V LID+Y+KCG +
Sbjct: 365 KHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKL 424
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+A LF +P + W +I+G ++G EAL LF ++ + ++P+ VTF+++L AC
Sbjct: 425 AEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484
Query: 457 THTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
+H G +++G + +D ++Y+ P HY+CMAD+LGR G+L EA +F+Q+MPIK
Sbjct: 485 SHAGLVDQGRSF----FDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKP 540
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
D+ +WG LL AC+IH N+E+G+ + LF+L+P + YV M+N YA G+WDGV +R+
Sbjct: 541 DSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRS 600
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRY--HAESELTYPVLDCLALHSREEAYSSHL 632
+++R ++K PG S + F + ++ H + E L L R Y S
Sbjct: 601 LVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDY 660
Query: 633 KWI 635
++
Sbjct: 661 SFV 663
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/628 (31%), Positives = 326/628 (51%), Gaps = 20/628 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ L ++ + + + P++ T + +AC L + +IHG I
Sbjct: 243 WNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIE 302
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + K + L +IFD+M +RD SWN M+ G++Q+G E ++
Sbjct: 303 KIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIK 362
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + + D +T+ + QA H L K VH + I G + D + N I+ YA
Sbjct: 363 LFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYA 421
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +L ++ VF G+ + + VSWNSM+ FD+++ ++ MM + D T
Sbjct: 422 KCGNLLASQEVFSGM--KCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTY 478
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V LLS L G+ +H GF+ ++ V NTL+ MY+KCG++ + +F+ +
Sbjct: 479 VMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA 538
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R ++W +I+ D + LR+ M G PD+ T+LS++ C A GK
Sbjct: 539 RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI 598
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
GL+ +V V N LI+MYSKCGS+ ++ ++F + K VV+WT +I+ C + GE
Sbjct: 599 HGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEG 658
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+A+ F ++ + P+ V F+A++ AC+H+G +E+G ++ K P ++HY
Sbjct: 659 KKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEG--LNYFHRMKKDYKIEPRIEHY 716
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R L +A DF+ SMP+K D+ IWG LL AC++ + EI + V+ + +L P
Sbjct: 717 ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNP 776
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
YV ++N YA G+WD V +IR +K +KK PG S I K F ++
Sbjct: 777 DDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSE 836
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWI 635
+ E +L LA +E Y ++L+++
Sbjct: 837 QFEEVNKLLGMLAGLMAKEGYIANLQFV 864
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 266/528 (50%), Gaps = 22/528 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S+ + WNS IR + + L L+ + ++ ++P+ TFP + ACA L D ++
Sbjct: 136 SNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 195
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++ F + + LD A K+F+EM +RDV SWN+++ G+ G+
Sbjct: 196 IHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 255
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L ++Y R +G+ D T+ + +A + +H IG+ DV V N
Sbjct: 256 WNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 315
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+S Y K + L +F + LR VSWN+M+ G + +++S+ + M+ N F+
Sbjct: 316 LLSMYCKFNGLIDGRRIFDKMV--LRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFK 372
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D+ T+ S+L + L G+ VH + I G++ D + N LI+MY+KCG++ +++ +
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F G+ + VSW +MI+ Y Q G DEA++LF M+ + PD VT + ++S Q G L
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVK-PDSVTYVMLLSMSTQLGDL 491
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
LGK G N++V N L+DMY+KCG +GD+ ++F + + +++W T+IA C
Sbjct: 492 XLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC 551
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+ + L + ++ + P+ T L++L C+ +G I + +
Sbjct: 552 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK---LGLE 608
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ + + ++ + G L+ + + M K D W L+ AC ++
Sbjct: 609 SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMY 655
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 19/317 (5%)
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T S+ + Q +HS I G V LI+ Y+ D S+ +F
Sbjct: 73 TLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 132
Query: 305 ICDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
V W ++I G EAL L+ + PD T S+I+ C E+
Sbjct: 133 ASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEM 192
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
K + G ++ + NALIDMY + + AR++F +P + VVSW ++I+G
Sbjct: 193 AKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 252
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG + EAL+++++ L + P+ T +VL+AC G +E+G II + I +
Sbjct: 253 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG---DIIHGLIEKIGIKKD 309
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+ + + + + L + M ++ DA W T++C Y
Sbjct: 310 VIVNNGLLSMYCKFNGLIDGRRIFDKMVLR-DAVSWNTMIC--------------GYSQV 354
Query: 544 KLEPHSAAPYVEMANKY 560
L S ++EM N++
Sbjct: 355 GLYEESIKLFMEMVNQF 371
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 311/595 (52%), Gaps = 23/595 (3%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI--------------VKSP 84
L F M P TF + K CA DL + +H + + +
Sbjct: 44 LAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM 103
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVT 143
+ KC R A ++FD M VRD +WNA++ G+A+ G + + M+ G + D +T
Sbjct: 104 YAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT 163
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
++ + A +A+ L+ + H+F I G++ V+V + +Y KC D++ A +VF +
Sbjct: 164 LVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMP 223
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALV 261
+ VSWN+M+ G ++L + M+ G +DVT V L + C E L
Sbjct: 224 TK--NSVSWNAMIDGYAQNGDSREALALFNRMVEEG--VDVTDVSVLAALQACGELGCLD 279
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+G VH + G D +VSV+N LI+MYSKC +D A +FD + RT+VSW AMI G A
Sbjct: 280 EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCA 339
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q G ++A+RLF M+ PD T++S+I +W Y+ L +V
Sbjct: 340 QNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V ALIDMY+KCG + AR LF + E+ V++W MI G +G A++LF ++ +
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG 459
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+ PN TFL+VL AC+H G +++G +D G+ P ++HY M DLLGR GKL
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGL--EPGMEHYGTMVDLLGRAGKLD 517
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
EA F+Q MP+ ++G +L ACK+H N+E+ E A +F+L P +V +AN YA
Sbjct: 518 EAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYA 577
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
W VA +RT M++N ++K PG S+ + + TF + H +++ Y L
Sbjct: 578 NASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRL 632
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + LF +M+ +++P++ T + A A +SD + ++ IHG+ +
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC R++ A +F+ R V +WNAM+ G+ GF + +
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M+ +GI + T + + A HA
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHA 477
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 323/618 (52%), Gaps = 19/618 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N IR + L +R M ++ P+ TFP + K CA+L L + HG ++K
Sbjct: 76 NVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIK 135
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ + K ++ A ++FD M VRD+ +WN M+ G+ G L
Sbjct: 136 LGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALAC 195
Query: 129 FYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + +Q D V ++ A K +H + I G++ D+ V + + Y
Sbjct: 196 FQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYC 255
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A VF + LRTVV+WN M+ G ++ D++ + + M G +++V T
Sbjct: 256 KCGEVAYARSVFATMP--LRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTA 313
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL++ E+ + GR VH + + F V + L+ MY K G ++S+ +F I +
Sbjct: 314 INLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIAN 373
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+T VSW MI+ Y K EA+ LF + PD T+ +++ G+L +
Sbjct: 374 KTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQI 433
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+Y G +N ++ NA++ MY++ G + +RE+F + K V+SW TMI G A++G+
Sbjct: 434 HSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQG 493
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
AL++F ++ L+PN TF++VL AC+ +G +++GW + + G+ P+++HY
Sbjct: 494 KTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMI--PQIEHY 551
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
CM DLLGR+G L+E L F++SMPI + +WG+LL A + +I+I EY A +F+LE
Sbjct: 552 GCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEH 611
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ Y+ +++ YA GRW+ V +R +MK +++ SL ++ C+F D H+
Sbjct: 612 DNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHS 671
Query: 608 ESELTYPVLDCLALHSRE 625
+S + V D L+ +E
Sbjct: 672 QSRTIHEVSDILSRKIKE 689
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 205/444 (46%), Gaps = 13/444 (2%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
R+D A + + D N M+ GFA G L + M G + D T + +
Sbjct: 56 RMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVK 115
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
L ++ H I +G++ DV CN+ ++ YAK ++ AE VF G+ +R +
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP--VRDI 173
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL--DVTTVVSLLSSFVCPEALVQGRLVH 267
V+WN MV G +L ++ M++ + D +++ L++ + +QG+ +H
Sbjct: 174 VTWNIMVDGYVSNGLGSLALACFQE-MHDALEVQHDSVGIIAALAACCLEFSSMQGKEIH 232
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ I +G + D+ V +L+ MY KCG++ AR +F + RT V+W MI GYA D
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EA F M A G ++VT +++++ C Q+ + G+ Y +V++ AL+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
+MY K G + + ++F + K +VSW MIA + EA+ LF +L+ L P+
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412
Query: 448 TFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
T V+ A G L I II G+ Y + + + R G + + +
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYII-----GLGYAENTLIMNAVLHMYARSGDVVASRE 467
Query: 506 FVQSMPIKSDAGIWGTLLCACKIH 529
M + D W T++ IH
Sbjct: 468 IFDKM-VSKDVISWNTMIMGYAIH 490
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/624 (31%), Positives = 326/624 (52%), Gaps = 25/624 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W+S + + + + L++F +++ E PN + +AC +L + +HG +
Sbjct: 118 WSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFV 177
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+S F K ++ A +FD+++ + +W ++ G+ + G L
Sbjct: 178 VRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSL 237
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF MR + D V + A + L K +H++ + G + DVSV N I Y
Sbjct: 238 ELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFY 297
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDVT 245
KC+ +K +F + ++ ++SW +M++G + FD +++ + M G++ D
Sbjct: 298 TKCNRVKAGRKLFDQMV--VKNIISWTTMISGYMQ-NSFDWEAMKLFGEMNRLGWKPDGF 354
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
S+L+S EAL QGR VH++ I + D V N LI MY+K + A+ +FD +
Sbjct: 355 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 414
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ +S+ AMI GY+ + L EAL LF M + P+ T ++I+ +L G+
Sbjct: 415 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQ 474
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
F N GL V NAL+DMY+KCGSI +AR++F + + VV W +MI+ A +G
Sbjct: 475 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 534
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD-KGISYNPEL 484
E EAL +F ++M+ ++PN VTF+AVL AC+H G +E G + ++ G P
Sbjct: 535 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG----LNHFNSMPGFGIKPGT 590
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+C+ LLGR GKL EA +F++ MPI+ A +W +LL AC+I N+E+G+Y A
Sbjct: 591 EHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIS 650
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
+P + Y+ ++N +A G W V +R M ++V K PG+S +N K F A D
Sbjct: 651 TDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDT 710
Query: 605 YHAESELTYPVLDCLALHSREEAY 628
H E+++ VLD L H + Y
Sbjct: 711 THREADIG-SVLDILIQHIKGAGY 733
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 244/496 (49%), Gaps = 21/496 (4%)
Query: 49 DIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCA 94
++ P F + + + +I+ ++IHG I+ S K DR+D A
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIH 153
+FD+M +++ +W++M+ ++Q G+ E L +F ++ R G + + + +A
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ +H F + G D DV V + I Y+K +++ A LVF + E +T V+W
Sbjct: 164 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE--KTAVTWT 221
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+++AG T + SL + M D V S+LS+ E L G+ +H++ +
Sbjct: 222 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 281
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G ++DVSV+N LI Y+KC + + R LFD + + +SWT MISGY Q EA++LF
Sbjct: 282 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M G PD S+++ CG ALE G+ Y L+ + V N LIDMY+K
Sbjct: 342 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 401
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ DA+++F + E+ V+S+ MI G + + EAL+LFH++ +PN TF A++
Sbjct: 402 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALI 461
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
A ++ L G Q G+ + P + + + D+ + G ++EA S I
Sbjct: 462 TAASNLASLRHGQQFH-NQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNS-SIW 517
Query: 514 SDAGIWGTLLCACKIH 529
D W +++ H
Sbjct: 518 RDVVCWNSMISTHAQH 533
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 333/624 (53%), Gaps = 40/624 (6%)
Query: 29 AVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH-------- 79
+VN++ H +L +F + K D++PN+ T+ F A + D ++IHG
Sbjct: 94 SVNES-PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDS 152
Query: 80 -------IVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM 132
IVK F K R++ A K+FD M +D WN M+ G+ + +++F ++
Sbjct: 153 ELLLGSNIVKMYF-KFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 133 -RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
+ D T++ + A + L L +HS G + V +IS Y+KC
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+KM +F E R +V++N+M+ G T + + SL+ ++ +M +G RL +T+VSL+
Sbjct: 272 IKMGSALFR--EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 252 SSFVCPEALVQGRL-----VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V G L +H + + F SV L ++YSK +I+SAR LFD
Sbjct: 330 P--------VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+++ SW AMISGY Q G ++A+ LF M+ + P+ VT+ ++S C Q GAL LGKW
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ S + ++ V ALI MY+KCGSI +AR LF + +K V+W TMI+G L+G+
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
EAL++F++++ + P VTFL VL AC+H G +++G I S+I + P +
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR----YGFEPSV 557
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
HY+CM D+LGR G L+ AL F+++M I+ + +W TLL AC+IH + + V+ LF+
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE 617
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P + +V ++N ++ + A +R K+ ++ K PG +L I FT+ D+
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 605 YHAESELTYPVLDCLALHSREEAY 628
H + + Y L+ L RE Y
Sbjct: 678 SHPQVKEIYEKLEKLEGKMREAGY 701
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
H+ I +GF D+S++ L S G I AR +F + + ++ G++
Sbjct: 39 THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 326 LDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+L +F + + +L P+ T IS G+ A G +++ +
Sbjct: 99 PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-ELDLR 443
++ MY K + DAR++F +PEK + W TMI+G N +VE++ +F L+ E R
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
+ T L +L A L G I
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQI 243
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ I + LFR+M++++ PN +T I ACA+L L + +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + F KC + A ++FD M ++ +WN M+ G+ G +
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L +FY M GI VT + + A HA
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHA 534
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 325/634 (51%), Gaps = 22/634 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V ++ + L LF++M++ I + T+ + ++CA LS +H H +
Sbjct: 226 WSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHAL 285
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA--QMGFLENV 125
K+ F KCD + AYK+F + ++ S+NAM++G+A + GF
Sbjct: 286 KTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGF--QA 343
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+LF ++ D V++ G AA K S +H I + +++ V N +
Sbjct: 344 FKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDM 403
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC L A +F +E +R VSWN+++ C + +L+ + M+ + D
Sbjct: 404 YGKCGALVEASGLFDEME--IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEF 461
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L + A G VH I G L + V + L+ MYSKCG ++ A + +
Sbjct: 462 TYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRL 521
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++T VSW A+ISG++ + +++ R F M G PD T +++ C + LGK
Sbjct: 522 EEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGK 581
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
L +V + + L+DMYSKCG++ D+ +F P++ V+W MI G A +G
Sbjct: 582 QIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHG 641
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL+LF ++ +++PN TF++VL+AC+H G +KG + Q + P+L+
Sbjct: 642 LGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKG--LFYFQKMASIYALEPQLE 699
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HYSCM D+LGR G+++EAL +Q MP ++DA IW TLL CKI N+E+ E A L KL
Sbjct: 700 HYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKL 759
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P ++ Y ++N YA G W V+ IR M+ + +KK PG S + + TF D+
Sbjct: 760 DPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKA 819
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
H + E+ Y +LD L R + + I E
Sbjct: 820 HPKCEMIYSLLDLLICDMRRSGCAPEIDTIQVEE 853
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 233/536 (43%), Gaps = 24/536 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + + WNS I + + K++ +F +M+ + ++ T K C+ L D
Sbjct: 113 FNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLED 172
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IHG V+ F KC+ L+ + +F E+ ++ SW+A + G
Sbjct: 173 QVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAG 232
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
Q L L+LF M+ GI T + ++ L +H + +D
Sbjct: 233 CVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSD 292
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V V + YAKCD++ A +F + + + S+N+M+ G ++ + + +
Sbjct: 293 VIVGTATLDMYAKCDNMSDAYKLFSLLPD--HNLQSYNAMIIGYARNEQGFQAFKLFLQL 350
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
N F D ++ LS+ + +G +H I ++ V N ++ MY KCG +
Sbjct: 351 QKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGAL 410
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
A LFD + R VSW A+I+ Q + L F AM + PD T S++ C
Sbjct: 411 VEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKAC 470
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
A G G+ + V +AL+DMYSKCG + +A ++ Y L E+ +VSW
Sbjct: 471 AGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWN 530
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+I+G +L + ++ F ++E+ + P+ T+ VL C + + G I
Sbjct: 531 AIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKL 590
Query: 476 KGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ +S D Y S + D+ + G + ++L + P K D+ W ++C H
Sbjct: 591 ELLS-----DVYITSTLVDMYSKCGNMHDSLLMFRKAP-KRDSVTWNAMICGFAYH 640
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 150/613 (24%), Positives = 249/613 (40%), Gaps = 97/613 (15%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEM 101
TF I + C+ L + H H++ S F VKC L+ AYK+F+EM
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 102 AVRDVASWNAM--------------------------------LVGFAQMGFLENVLRLF 129
RD+ SWN M + G+ Q G ++ + +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK------SVHSFGIHIGVDADVSVCNTWI 183
MR +G+ D T+ A+ K SLL+ +H + +G D DV + +
Sbjct: 146 LKMRDLGVMFDHTTL------AVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALV 199
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC+ L+ + VF + + + +SW++ +AGC D+ L ++ M G +
Sbjct: 200 DMYAKCNSLEDSLDVFSELPD--KNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVS 257
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+T S+ S A G +H H + F DV V + MY+KC ++ A LF
Sbjct: 258 QSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFS 317
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ D S+ AMI GYA+ +A +LF ++ D V++ +S
Sbjct: 318 LLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSE 377
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G A L N+ V NA++DMY KCG++ +A LF + + VSW +I C
Sbjct: 378 GLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQ 437
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC-----------THTGFLEKGWAISII- 471
N + L F ++ + P+ T+ +VL+AC H ++ G + +
Sbjct: 438 NESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFV 497
Query: 472 ------QYDDKGISYNPELDHY----------SCMADLLGRKGKLKEALDFVQ---SMPI 512
Y G+ E HY + + + K +++ F M +
Sbjct: 498 GSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGV 557
Query: 513 KSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS----AAPYVEMANKYALGGRWDG 568
+ D + T+L C + +G+ + + KLE S + V+M +K G D
Sbjct: 558 EPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSK--CGNMHDS 615
Query: 569 VANIRTMMKRNQV 581
+ R KR+ V
Sbjct: 616 LLMFRKAPKRDSV 628
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 308/574 (53%), Gaps = 14/574 (2%)
Query: 69 DLIYSQMIHGHIVKSPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQM 119
D +Y Q+I + K F+ ++ A+K F E++ D+ WNA++ G+ Q
Sbjct: 4 DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 63
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
++ +R++ +M++ + + T + + +A + K +H G ++V V
Sbjct: 64 NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 123
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ +S YAK + A +VF + +R TVVSW S+++G ++LN ++ M
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDR--TVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 181
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D +VS+++++ E L QG+ +H G + + ++ +L +MY+K G ++ AR
Sbjct: 182 VKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVAR 241
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F+ + + W AMISGYA G +EA++LF M D +T+ S + Q G
Sbjct: 242 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 301
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+LEL +W D Y +D+ V LIDMY+KCGSI AR +F + +K VV W+ MI
Sbjct: 302 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 361
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G L+G EA+ L++++ + + PN TF+ +L AC ++G +++GW + + D GI
Sbjct: 362 GYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIE 420
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P HYSC+ DLLGR G L +A DF+ SMPIK +WG LL ACKIH + +GE A
Sbjct: 421 --PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAA 478
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF L+P++ YV+++N YA W VAN+R MM + + K G S ING TF
Sbjct: 479 EQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETF 538
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
DR H +S+ + LD L + Y H++
Sbjct: 539 QVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHME 572
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 199/418 (47%), Gaps = 17/418 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I+ KN + ++ M+ + + PN TF ++ KAC S + IHG
Sbjct: 53 WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 112
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + K ++ A +FD++ R V SW +++ G+ Q G L
Sbjct: 113 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 172
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR ++ D++ ++ + A + + L KS+H +G++ + + + + YA
Sbjct: 173 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA 232
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K +++A F +E+ ++ WN+M++G ++++ +R M+ R+D T+
Sbjct: 233 KRGLVEVARFFFNRMEK--PNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITM 290
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S + + +L R + + + D V LI MY+KCG I AR +FD + D
Sbjct: 291 RSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVAD 350
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W+ MI GY G EA+ L+ M+ AG P+ T + +++ C SG ++ G
Sbjct: 351 KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWEL 410
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN 424
+ G++ + + ++D+ + G + A + ++P K VS W +++ C ++
Sbjct: 411 FHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 16/250 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ W S I V + + L +F++M+Q +++P+ + + A + DL + IH
Sbjct: 150 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 209
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G + K + + K ++ A F+ M ++ WNAM+ G+A G+ E
Sbjct: 210 GLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGE 269
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
++LF M I+ D +T+ A+ L L + + + D V I
Sbjct: 270 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 329
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + +A VF + + + VV W+ M+ G +++ Y M G +
Sbjct: 330 DMYAKCGSIYLARCVFDRVAD--KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 387
Query: 244 VTTVVSLLSS 253
T + LL++
Sbjct: 388 DGTFIGLLTA 397
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 318/605 (52%), Gaps = 31/605 (5%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDR 90
+K + P+N T+ F A + D +H H V F K R
Sbjct: 97 LKNTTLSPDNFTYAF---AISASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSR 153
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ A K+FD+M RD WN M+ G + ++ +++F +M G++ D TV + A
Sbjct: 154 VAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPA 213
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ + + + + +G D V IS ++KC+D+ A L+F I R +V
Sbjct: 214 VAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMI--RKPDLV 271
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL----- 265
S+N++++G + + + ++ ++R ++ +G R+ +T+V L+ P + G L
Sbjct: 272 SYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLI-----PVSSPFGHLHLACC 326
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+ + G L SV L ++YS+ +ID AR LFD ++T +W AMISGYAQ G
Sbjct: 327 IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGL 386
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ A+ LF M P+ VT+ S++S C Q GAL GK S L+ N+ V A
Sbjct: 387 TEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTA 446
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LIDMY+KCG+I +A +LF EK V+W TMI G L+G EAL LF++++ L +P+
Sbjct: 447 LIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPS 506
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
VTFL+VL AC+H G + +G I + I P +HY+CM D+LGR G+L++AL+
Sbjct: 507 SVTFLSVLYACSHAGLVREGDEIFHAMVNKYRI--EPLAEHYACMVDILGRAGQLEKALE 564
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F++ MP++ +WGTLL AC IH + + + LF+L+P + YV ++N Y++
Sbjct: 565 FIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERN 624
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
+ A++R +K+ + K PG +L +NG F DR H+++ Y L+ L RE
Sbjct: 625 FPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMRE 684
Query: 626 EAYSS 630
Y S
Sbjct: 685 MGYQS 689
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 2 AVSSLPPRLNRI---------YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP 52
A++++ RLN I T+ WN+ I + LF++M + P
Sbjct: 345 ALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTP 404
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKI 97
N +T I ACA+L L + + +H ++KS + KC + A ++
Sbjct: 405 NPVTITSILSACAQLGALSFGKSVH-QLIKSKNLEQNIYVSTALIDMYAKCGNISEASQL 463
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
FD + ++ +WN M+ G+ G+ + L+LF M +G Q VT + + A HA
Sbjct: 464 FDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHA 520
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 308/574 (53%), Gaps = 14/574 (2%)
Query: 69 DLIYSQMIHGHIVKSPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQM 119
D +Y Q+I + K F+ ++ A+K F E++ D+ WNA++ G+ Q
Sbjct: 19 DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 78
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
++ +R++ +M++ + + T + + +A + K +H G ++V V
Sbjct: 79 NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 138
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ +S YAK + A +VF + +R TVVSW S+++G ++LN ++ M
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDR--TVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 196
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D +VS+++++ E L QG+ +H G + + ++ +L +MY+K G ++ AR
Sbjct: 197 VKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVAR 256
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F+ + + W AMISGYA G +EA++LF M D +T+ S + Q G
Sbjct: 257 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 316
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+LEL +W D Y +D+ V LIDMY+KCGSI AR +F + +K VV W+ MI
Sbjct: 317 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 376
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G L+G EA+ L++++ + + PN TF+ +L AC ++G +++GW + + D GI
Sbjct: 377 GYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIE 435
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P HYSC+ DLLGR G L +A DF+ SMPIK +WG LL ACKIH + +GE A
Sbjct: 436 --PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAA 493
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF L+P++ YV+++N YA W VAN+R MM + + K G S ING TF
Sbjct: 494 EQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETF 553
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
DR H +S+ + LD L + Y H++
Sbjct: 554 QVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHME 587
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 199/418 (47%), Gaps = 17/418 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I+ KN + ++ M+ + + PN TF ++ KAC S + IHG
Sbjct: 68 WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 127
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + K ++ A +FD++ R V SW +++ G+ Q G L
Sbjct: 128 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 187
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR ++ D++ ++ + A + + L KS+H +G++ + + + + YA
Sbjct: 188 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA 247
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K +++A F +E+ ++ WN+M++G ++++ +R M+ R+D T+
Sbjct: 248 KRGLVEVARFFFNRMEK--PNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITM 305
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S + + +L R + + + D V LI MY+KCG I AR +FD + D
Sbjct: 306 RSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVAD 365
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W+ MI GY G EA+ L+ M+ AG P+ T + +++ C SG ++ G
Sbjct: 366 KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWEL 425
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN 424
+ G++ + + ++D+ + G + A + ++P K VS W +++ C ++
Sbjct: 426 FHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 16/250 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ W S I V + + L +F++M+Q +++P+ + + A + DL + IH
Sbjct: 165 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 224
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G + K + + K ++ A F+ M ++ WNAM+ G+A G+ E
Sbjct: 225 GLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGE 284
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
++LF M I+ D +T+ A+ L L + + + D V I
Sbjct: 285 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 344
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + +A VF + + + VV W+ M+ G +++ Y M G +
Sbjct: 345 DMYAKCGSIYLARCVFDRVAD--KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 402
Query: 244 VTTVVSLLSS 253
T + LL++
Sbjct: 403 DGTFIGLLTA 412
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 320/602 (53%), Gaps = 20/602 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVK 87
F M ++D+E + +TF + +L L Q +H +K + + K
Sbjct: 310 FMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 369
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
++ A +F+ M+ RD+ SWN+++ G AQ + LF + G++ D T+ +
Sbjct: 370 LRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSV 429
Query: 148 TQAAIH-AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+AA + LSL K +H I AD V I +Y++ +K AE++F L
Sbjct: 430 LKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFDL 489
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
V+WN+M++G T +L + M G R D T+ ++L + A+ QG+ V
Sbjct: 490 ---VAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQV 546
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H++ I G+DLD+ V + ++ MY KCGD+ +A+ FD I V+WT +ISG + G+
Sbjct: 547 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEE 606
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+ AL +F M G LPD T+ ++ ALE G+ A + V +L
Sbjct: 607 ERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSL 666
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+KCGSI DA LF + + +W M+ G A +GE EAL LF Q+ L ++P++
Sbjct: 667 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDK 726
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
VTF+ VL AC+H+G + + + + D GI PE++HYSC+AD LGR G +KEA +
Sbjct: 727 VTFIGVLSACSHSGLVSEAYKYIRSMHRDYGI--KPEIEHYSCLADALGRAGLVKEAENL 784
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+ SM +++ A ++ TLL AC++ + E G+ VA L +LEP ++ YV ++N YA +W
Sbjct: 785 IDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 844
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
D + RTMMK ++VKK PG S + K F +DR + ++EL Y + + ++E
Sbjct: 845 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQE 904
Query: 627 AY 628
Y
Sbjct: 905 GY 906
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 189/371 (50%), Gaps = 4/371 (1%)
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D AV ++ S N +L G+ G +L+ F +M ++ D VT + + A+ L+
Sbjct: 280 DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLA 339
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
L + VH + +G+D ++V N+ I+ Y K + +A VF + E R ++SWNS++AG
Sbjct: 340 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE--RDLISWNSVIAG 397
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL-SSFVCPEALVQGRLVHSHGIHYGFDL 277
D +++ + ++ G + D T+ S+L ++ PE L + +H H I
Sbjct: 398 IAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVA 457
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D V LI YS+ + A VLF G + V+W AM+SGY Q D + L LF M
Sbjct: 458 DSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMH 516
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
GE D T+ +++ CG A+ GK YA G ++ V + ++DMY KCG +
Sbjct: 517 KQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 576
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A+ F ++P V+WTT+I+GC NGE AL +F Q+ + + P+ T + +A +
Sbjct: 577 AAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASS 636
Query: 458 HTGFLEKGWAI 468
LE+G I
Sbjct: 637 CLTALEQGRQI 647
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 230/536 (42%), Gaps = 66/536 (12%)
Query: 22 WNS------QIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
WNS Q E V +N + LLFR ++Q+ + + +T + K C + S+
Sbjct: 115 WNSILAAYAQSSEGVVEN-VKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASES 173
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
HG+ K + ++K ++ +F+EM RDV WN ML + +MGF
Sbjct: 174 FHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGF 233
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E + L G+ + +T+ L++ + +KS + G DA
Sbjct: 234 KEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFEN-----GNDASA----- 283
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ ++S N +++G + ++ L + M+ +
Sbjct: 284 ------------------------VSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLE 319
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T + +L++ V ++L G+ VH + G DL ++V N+LI+MY K I AR +
Sbjct: 320 CDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTV 379
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ-SGA 360
F+ + +R +SW ++I+G AQ EA+ LF + G PD T+ S++
Sbjct: 380 FNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEG 439
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L L K +A + V ALID YS+ + +A E+ + +V+W M++G
Sbjct: 440 LSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA-EVLFGRNNFDLVAWNAMMSG 498
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
+ + + L+LF + + R + T VL+ C + +G + Y K Y
Sbjct: 499 YTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVH--AYAIKS-GY 555
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
+ +L S + D+ + G + A S+P+ D W TL+ C IE GE
Sbjct: 556 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTLISGC-----IENGE 605
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 211/468 (45%), Gaps = 60/468 (12%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMA 102
F F+ A + SDL+ + H I+ S + KC L A ++FD+M
Sbjct: 50 FGFLRDAIST-SDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMP 108
Query: 103 VRDVASWNAMLVGFAQM--GFLENVLRLFYNMRLVGIQADFVTVMGLT---QAAIHAKHL 157
RD+ SWN++L +AQ G +ENV F R++ + + M L+ + +H+ ++
Sbjct: 109 ERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 168
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+S H + IG+D D V ++ Y K +K ++F E R VV WN M
Sbjct: 169 CASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLF--EEMPYRDVVLWNLM-- 224
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
L Y M GF+ + + L S+F H+ G+H ++
Sbjct: 225 -----------LKAYLEM---GFKEE---AIDLSSAF------------HTSGLHPN-EI 254
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+ +++ + S+ G + S D +S ++SGY G L+ F M
Sbjct: 255 TLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMV 314
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+ D VT + +++ + +L LG+ A GL + V N+LI+MY K IG
Sbjct: 315 ESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIG 374
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
AR +F + E+ ++SW ++IAG A + VEA+ LF QL+ L+P+ T +VL+A +
Sbjct: 375 LARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEA 503
L +G ++S Q I N D + + + D R +KEA
Sbjct: 435 S---LPEGLSLS-KQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA 478
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 141/330 (42%), Gaps = 24/330 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + ++ HKTL LF M + ++ T + K C L + + +H + +
Sbjct: 492 WNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAI 551
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS +VKC + A FD + V D +W ++ G + G E L
Sbjct: 552 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALH 611
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MRL+G+ D T+ L +A+ L + +H+ + + +D V + + YA
Sbjct: 612 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYA 671
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F IE + + +WN+M+ G + ++L ++ M G + D T
Sbjct: 672 KCGSIDDAYCLFKRIE--MMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTF 729
Query: 248 VSLLS----SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ +LS S + EA R +H YG ++ + L + G + A L D
Sbjct: 730 IGVLSACSHSGLVSEAYKYIRSMHR---DYGIKPEIEHYSCLADALGRAGLVKEAENLID 786
Query: 304 GICDRTRVS-WTAMISGYAQKGDLDEALRL 332
+ S + +++ +GD + R+
Sbjct: 787 SMSMEASASMYRTLLAACRVQGDTETGKRV 816
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 329/627 (52%), Gaps = 24/627 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I N +A + + F M + PN F + +AC+ ++ ++I G ++
Sbjct: 10 WSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLL 69
Query: 82 KSPFVKCD----------------RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K+ + + D L+ AYK+FD M R+V +W M+ F Q+GF +
Sbjct: 70 KTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDA 129
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF +M L G D T+ G+ A LSL + H + G+D DV V + +
Sbjct: 130 VDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDM 189
Query: 186 YAKC---DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFR 241
YAKC + A VF + + V+SW +++ G D +++ + M+ +
Sbjct: 190 YAKCVADGSVDDARKVFDRMP--VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVK 247
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T S+L + + G V++ + V N+LISMYS+CG++++AR
Sbjct: 248 PNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKA 307
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + ++ VS+ +++ YA+ + +EA LF +E AG + T S++SG GA+
Sbjct: 308 FDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAI 367
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ + G K N+ +CNALI MYS+CG+I A ++F + + V+SWT+MI G
Sbjct: 368 GKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGF 427
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A +G AL+ FH+++E + PN VT++AVL AC+H G + +G + GI
Sbjct: 428 AKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIV-- 485
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++HY+C+ DLLGR G L+EA++ V SMP K+DA + T L AC++H N+++G++ A
Sbjct: 486 PRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEM 545
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ + +PH A Y+ ++N +A G+W+ VA IR MK + K G S + K F
Sbjct: 546 ILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYV 605
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
D H +++ Y LD LAL +E Y
Sbjct: 606 GDTSHPQAQEIYDELDQLALKIKELGY 632
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 183/371 (49%), Gaps = 8/371 (2%)
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
RD+ SW+A++ +A + F++M G + G+ +A + +++SL K +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 164 HSFGIHIG-VDADVSVCNTWISSYAKCD-DLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
F + G ++DV V I + K + DL+ A VF + + R VV+W M+
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPD--RNVVTWTLMITRFQQ 122
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
D+++ + M+ +G+ D T+ ++S+ L GR H + G DLDV V
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182
Query: 282 INTLISMYSKC---GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD-EALRLFFAME 337
+L+ MY+KC G +D AR +FD + +SWTA+I+GY Q G D EA+ LF M
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
P+ T S++ C + LG+ L V N+LI MYS+CG++
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNME 302
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+AR+ F L EK +VS+ T++ A + EA +LF+++ N TF ++L +
Sbjct: 303 NARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGAS 362
Query: 458 HTGFLEKGWAI 468
G + KG I
Sbjct: 363 SIGAIGKGEQI 373
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 309/595 (51%), Gaps = 29/595 (4%)
Query: 43 RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMA 102
R+ Q+ +PN +F I A AK S P + A+++FD++
Sbjct: 63 RKAFQDISDPNVFSFNAIIAAYAKES--------------RPLI-------AHQLFDQIP 101
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
D+ S+N ++ +A G L LF MR +G+ D T+ + A + L+
Sbjct: 102 EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITAC--CDDVGLIGQ 159
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+HS + G D+ VSV N ++ Y K DL A+ VF G+ +R VSWNSM+
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGG-IRDEVSWNSMIVAYGQH 218
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ +L ++ M+ G +D+ T+ S+L++F C E L G H I GF + V
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 283 NTLISMYSKCGD-IDSARVLFDGICDRTRVSWTAMISGYAQKGD-LDEALRLFFAMEAAG 340
+ LI +YSKCG + R +F+ I + V W M+SGY+Q + L++AL F M+ G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDA 399
P+ + + +IS C + GK + A + N + V NALI MYSKCG++ DA
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDA 398
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
R LF + E VS +MIAG A +G +E+L LF ++E + P +TF++VL AC HT
Sbjct: 399 RRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHT 458
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G +E+GW + + + PE +HYSCM DLLGR GKL EA + + MP + W
Sbjct: 459 GRVEEGW--NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGW 516
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
+LL AC+ H NIE+ A + +LEP +AAPYV ++N YA GRW+ VA +R M+
Sbjct: 517 ASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDR 576
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
VKK PG S + + F AED H + Y L+ ++ + Y ++W
Sbjct: 577 GVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRW 631
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 166/354 (46%), Gaps = 34/354 (9%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI---- 202
L + I + LS KS+HS I + N +I Y+KC L A F I
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 203 -------------EERL------------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
E R +VS+N++++ + +L + M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G +D T+ +++++ C + + G+L HS + GFD VSV N L++ Y K GD+D
Sbjct: 134 MGLDMDXFTLSAVITA-CCDDVGLIGQL-HSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 298 ARVLFDGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A+ +F G+ R VSW +MI Y Q + +AL LF M G D+ T+ S+++
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC-GSIGDARELFYALPEKIVVSWT 415
L G F G N V + LID+YSKC G + D R++F + E +V W
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 416 TMIAGCALNGEFVE-ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
TM++G + N EF+E AL+ F Q+ + RPN +F+ V+ AC++ +G I
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 145/330 (43%), Gaps = 23/330 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I E K L LF++M + + + T + A L DL HG ++
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLI 267
Query: 82 KSPFVKCDRL----------------DCAYKIFDEMAVRDVASWNAMLVGFAQ-MGFLEN 124
K+ F + + DC K+F+E+ D+ WN M+ G++Q FLE+
Sbjct: 268 KTGFHQNSHVGSGLIDLYSKCGGGMSDCR-KVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 183
L F M+ +G + + + + + A + S K +HS + + ++ +SV N I
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y+KC +L+ A +F + E VS NSM+AG +SL+ ++ M+
Sbjct: 387 AMYSKCGNLQDARRLFDRMAE--HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPT 444
Query: 244 VTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T +S+LS+ + +G + + + + + +I + + G + A L
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 303 DGIC-DRTRVSWTAMISGYAQKGDLDEALR 331
+ + + W +++ G+++ A++
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVK 534
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 317/591 (53%), Gaps = 27/591 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD---LIYSQMIHG 78
WN IR + + L LFR M+++ + P+N T +A++ A + +H
Sbjct: 87 WNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHA 146
Query: 79 HIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ + F ++ A K+F+EM RDV SW M+ FAQ G +N
Sbjct: 147 LVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDN 206
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
VLR M+ G + + +T++ L A + + V++ G++ADV + N I
Sbjct: 207 VLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIG 266
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC + A F G+ +R SWN+++ G K ++L + M+ +G DV
Sbjct: 267 MYVKCGCMSDAWKTFKGMP--IRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDV 324
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+VS+LS++ L QGR +H++ + D+ + N+LI+MY+KCGD+ +A ++F+
Sbjct: 325 ITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFEN 384
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R VSWTAM+ GY + A LF M+ + + ++S++S C Q GAL+ G
Sbjct: 385 MARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKG 444
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ +Y ++ ++ + +AL+DMY+KCG I A E+F + K ++W MI G A
Sbjct: 445 REIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQ 504
Query: 425 GEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN-- 481
G+ EA+ LF QL++L D +P+ +T VL ACTH G +++G + Y + ++
Sbjct: 505 GQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEG-----LHYFNLMLTLGIV 559
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P+ +HY C+ DLLGR G L EA +F+Q MPI+ + IWG+LL AC++H +E+G+ +
Sbjct: 560 PDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQH 619
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
+ L P+ +V ++N +A G+WD V +R MM +V+K PG S +
Sbjct: 620 IIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 211/423 (49%), Gaps = 19/423 (4%)
Query: 63 ACAKLSDL--IYSQMIHGHIVKSPFV----------KCDRLDCAY--KIFDEMAVRDVAS 108
ACA ++L ++ +++ H+ P V R D Y K+FD MA
Sbjct: 27 ACASRANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIV 86
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA---IHAKHLSLLKSVHS 165
WN M+ G+ + L LF MR G+ D T+ + Q++ K + +VH+
Sbjct: 87 WNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHA 146
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
IG +D+ V + I+ Y ++ A VF + E R VVSW M++ ++
Sbjct: 147 LVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHE--RDVVSWTLMISAFAQCGQW 204
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D+ L M G + + T++SLLS+ A+ +G V++ YG + DV + N L
Sbjct: 205 DNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNAL 264
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
I MY KCG + A F G+ R SW +I G+ Q G EAL +F M + G +PD+
Sbjct: 265 IGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDV 324
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T++S++S Q G L+ G++ NY + ++++ N+LI+MY+KCG + A +F
Sbjct: 325 ITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFEN 384
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + +VSWT M+ G +F A +LF + D+ + + +++L AC+ G L+KG
Sbjct: 385 MARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKG 444
Query: 466 WAI 468
I
Sbjct: 445 REI 447
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W + + V + LF MK D+ + + + AC++L L + IH
Sbjct: 390 IVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHS 449
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+I + + KC +D A +IF M + +WNAM+ G A G +
Sbjct: 450 YIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKE 509
Query: 125 VLRLFYN-MRLVGIQADFVTVMGLTQAAIH 153
+ LF ++L + D +T+ + A H
Sbjct: 510 AVALFEQLLKLRDPKPDAITLKVVLCACTH 539
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 204/610 (33%), Positives = 311/610 (50%), Gaps = 20/610 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + L L+ ++ I P+ TFP + ++CA DL+ + +H H+V
Sbjct: 103 WNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVV 162
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F VKC + A +FD+M RD SWNAM+ G+ + L
Sbjct: 163 RFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLE 222
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ MR + I D +T+ + A L +HS+ + D ++SV N+ I Y
Sbjct: 223 LFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYL 282
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K AE VF G+E R VVSW ++++GC D +L Y+ M G D T+
Sbjct: 283 SVGHWKEAESVFSGME--CRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTI 340
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ L G +H G L V V N+LI MYSKC I+ A +F I D
Sbjct: 341 ASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPD 400
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SWT++I+G EAL +FF P+ VT++S +S C + GAL GK
Sbjct: 401 KDVISWTSVINGLRINNRCFEAL-IFFRKMILKSKPNSVTLISALSACARVGALMCGKEI 459
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+A G+ + + NA++D+Y +CG + A F L EK V +W ++ G A G+
Sbjct: 460 HAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKG 518
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
++LF +++E ++ P+ VTF+++L AC+ +G + +G + Q P L HY
Sbjct: 519 AMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEG--LEYFQRMKVNYHITPNLKHY 576
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLLGR GKL EA +F++ MPIK D IWG LL AC+IH ++ +GE A +FK +
Sbjct: 577 ACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDA 636
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
S Y+ + N YA G+WD VA +R MK + PG S + GK F + D +H
Sbjct: 637 ESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHP 696
Query: 608 ESELTYPVLD 617
+ + VL+
Sbjct: 697 QMQEINVVLE 706
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 232/448 (51%), Gaps = 12/448 (2%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+ + S FV+ + A+ +F M RD+ SWN ++ G+ + GF + L L++ + GI
Sbjct: 72 GNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGI 131
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ D T + ++ A L + VH+ + D DV V N I+ Y KC D+ A +
Sbjct: 132 RPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARM 191
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS--FV 255
+F + R R +SWN+M++G D+ + L + M D+ T+ S++S+ +
Sbjct: 192 LFDKMPTRDR--ISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELL 249
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
E L G +HS+ + +D ++SV N+LI MY G A +F G+ R VSWT
Sbjct: 250 GDERL--GTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTT 307
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+ISG D+AL + ME G +PD VT+ S++S C G L++G A G
Sbjct: 308 IISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTG 367
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
V+V N+LIDMYSKC I A E+F+ +P+K V+SWT++I G +N EAL F
Sbjct: 368 HILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFR 427
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+++ L +PN VT ++ L AC G L G I G+ ++ L + + DL
Sbjct: 428 KMI-LKSKPNSVTLISALSACARVGALMCGKEIH-AHALKAGMGFDGFLPN--AILDLYV 483
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLL 523
R G+++ AL+ Q + D G W LL
Sbjct: 484 RCGRMRTALN--QFNLNEKDVGAWNILL 509
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 219/428 (51%), Gaps = 21/428 (4%)
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVTVMGLTQAAI-HAKHLSLLKSVHS 165
N+ L+ G LE L+ +M+ V I + FV ++ L + +++ + K+V S
Sbjct: 2 NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ + V + N +S + + D+ A VF + ER + SWN +V G T F
Sbjct: 62 SLVTL---LSVRLGNALLSMFVRFGDVGNAWNVFGRMGER--DLFSWNVLVGGYTKAGFF 116
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D++L Y +++ G R DV T S+L S LV+GR VH+H + + FD+DV V+N L
Sbjct: 117 DEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNAL 176
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
I+MY KCGD+ SAR+LFD + R R+SW AMISGY + + E L LFF M PDL
Sbjct: 177 ITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDL 236
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T+ S+IS C G LG +Y N+ V N+LI MY G +A +F
Sbjct: 237 MTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSG 296
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + VVSWTT+I+GC N +AL+ + + P+ VT +VL AC G L+ G
Sbjct: 297 MECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMG 356
Query: 466 WAISIIQYDDKGISY----NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
+ + I Y N +D YS + ++++AL+ +P K D W +
Sbjct: 357 MKLHELAERTGHILYVVVANSLIDMYS-------KCKRIEKALEIFHQIPDK-DVISWTS 408
Query: 522 LLCACKIH 529
++ +I+
Sbjct: 409 VINGLRIN 416
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 306/586 (52%), Gaps = 29/586 (4%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWN 110
+ N + F+ AK+ D S + +V+ ++ R + A ++FD++ RDV SWN
Sbjct: 24 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-IEGKRSESASELFDKLCDRDVISWN 82
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
+M+ G+ G E L ++ M +GI D T++ + + LSL K+VHS I
Sbjct: 83 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKS 142
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
+ ++ NT + Y+KC DL A VF + ER VVSW SM+AG T D ++
Sbjct: 143 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGWSDGAII 200
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M G +LDV + S+L + +L G+ VH + ++ V N L+ MY+
Sbjct: 201 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYA 260
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVL 349
KCG ++ A +F + + +SW M+ GEL PD T+
Sbjct: 261 KCGSMEGANSVFSTMVVKDIISWNTMV----------------------GELKPDSRTMA 298
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
++ C ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K
Sbjct: 299 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 358
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
+VSWT MIAG ++G EA+ F+++ + + P+ V+F+++L AC+H+G LE+GW
Sbjct: 359 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF 418
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
I +D I P+L+HY+CM DLL R G L +A F++++PI DA IWG LLC C+I+
Sbjct: 419 YIMKNDFNIE--PKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
+IE+ E VA +F+LEP + YV +AN YA +W+ V +R + + ++K PG S
Sbjct: 477 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSW 536
Query: 590 FHINGKTCTF-TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
I G+ F + + H S+ +L + +EE Y K+
Sbjct: 537 IEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKY 582
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 205/449 (45%), Gaps = 41/449 (9%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I V+ + L +++QM I+ + T + CAK L + +H
Sbjct: 80 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLA 139
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+KS F KC LD A ++F++M R+V SW +M+ G+ + G+ + +
Sbjct: 140 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 199
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M G++ D V + + A + L K VH + + +++ VCN + Y
Sbjct: 200 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 259
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC ++ A VF + ++ ++SWN+MV + D T
Sbjct: 260 AKCGSMEGANSVFSTMV--VKDIISWNTMVG---------------------ELKPDSRT 296
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +L + AL +G+ +H + + G+ D V N L+ +Y KCG + AR+LFD I
Sbjct: 297 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 356
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ VSWT MI+GY G +EA+ F M AG PD V+ +S++ C SG LE G +
Sbjct: 357 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+F ++ + ++D+ S+ G++ A + LP W ++ GC +
Sbjct: 417 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ A + ++ EL+ P + +L
Sbjct: 477 HDIELAEKVAERVFELE--PENTGYYVLL 503
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 59/296 (19%)
Query: 285 LISMYSKCGDI------------------------------------------------- 295
L+S Y+ CGD+
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 296 --DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+SA LFD +CDR +SW +MISGY G + L ++ M G DL T++S++
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
GC +SG L LGK + A + + N L+DMYSKCG + A +F + E+ VVS
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
WT+MIAG +G A+ L Q+ + ++ + V ++L AC +G L+ G +
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH---- 237
Query: 474 DDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
D + N + + C A D+ + G ++ A +M +K D W T++ K
Sbjct: 238 -DYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGELK 291
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 321/613 (52%), Gaps = 19/613 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N IR + L +R M ++ P+ TFP + K CA+L L + HG ++K
Sbjct: 76 NVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIK 135
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ + K ++ A ++FD M VRD+ +WN M+ G+ G L
Sbjct: 136 LGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALAC 195
Query: 129 FYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + +Q D V ++ A K +H + I G++ D+ V + + Y
Sbjct: 196 FQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYC 255
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A VF + LRTVV+WN M+ G ++ D++ + + M G +++V T
Sbjct: 256 KCGEVAYARSVFATMP--LRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTA 313
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL++ E+ + GR VH + + F V + L+ MY K G ++S+ +F I +
Sbjct: 314 INLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIAN 373
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+T VSW MI+ Y K EA+ LF + PD T+ +++ G+L +
Sbjct: 374 KTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQI 433
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+Y G +N ++ NA++ MY++ G + +RE+F + K V+SW TMI G A++G+
Sbjct: 434 HSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQG 493
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
AL++F ++ L+PN TF++VL AC+ +G +++GW + + G+ P+++HY
Sbjct: 494 KTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMI--PQIEHY 551
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
CM DLLGR+G L+E L F++SMPI + +WG+LL A + +I+I EY A +F+LE
Sbjct: 552 GCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEH 611
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ Y+ +++ YA GRW+ V +R +MK +++ SL ++ C+F D H+
Sbjct: 612 DNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHS 671
Query: 608 ESELTYPVLDCLA 620
+S + V + L+
Sbjct: 672 QSRTIHEVSNILS 684
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 206/444 (46%), Gaps = 13/444 (2%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
R+D A + + D N M+ GFA G L + M G + D T + +
Sbjct: 56 RMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVK 115
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
L ++ H I +G++ DV CN+ ++ YAK ++ AE VF G+ +R +
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP--VRDI 173
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL--DVTTVVSLLSSFVCPEALVQGRLVH 267
V+WN+MV G +L ++ M++ + D +++ L++ + +QG+ +H
Sbjct: 174 VTWNTMVDGYVSNGLGSLALACFQE-MHDALEVQHDSVGIIAALAACCLEVSSMQGKEIH 232
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ I +G + D+ V +L+ MY KCG++ AR +F + RT V+W MI GYA D
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EA F M A G ++VT +++++ C Q+ + G+ Y +V++ AL+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
+MY K G + + ++F + K +VSW MIA + EA+ LF +L+ L P+
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412
Query: 448 TFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
T V+ A G L I II G+ Y + + + R G + + +
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYII-----GLGYAENTLIMNAVLHMYARSGDVVASRE 467
Query: 506 FVQSMPIKSDAGIWGTLLCACKIH 529
M + D W T++ IH
Sbjct: 468 IFDKM-VSKDVISWNTMIMGYAIH 490
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 309/595 (51%), Gaps = 29/595 (4%)
Query: 43 RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMA 102
R+ Q+ +PN +F I A AK S P + A+++FD++
Sbjct: 63 RKAFQDISDPNVFSFNAIIAAYAKES--------------RPLI-------AHQLFDQIP 101
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
D+ S+N ++ +A G L LF MR +G+ D T+ + A + L+
Sbjct: 102 EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITAC--CDDVGLIGQ 159
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+HS + G D+ VSV N ++ Y K DL A+ VF G+ +R VSWNSM+
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGG-IRDEVSWNSMIVAYGQH 218
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ +L ++ M+ G +D+ T+ S+L++F C E L G H I GF + V
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 283 NTLISMYSKCGD-IDSARVLFDGICDRTRVSWTAMISGYAQKGD-LDEALRLFFAMEAAG 340
+ LI +YSKCG + R +F+ I + V W M+SGY+Q + L++AL F M+ G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDA 399
P+ + + +IS C + GK + A + N + V NALI MYSKCG++ DA
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDA 398
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
R LF + E VS +MIAG A +G +E+L LF ++E + P +TF++VL AC HT
Sbjct: 399 RRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHT 458
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G +E+GW + + + PE +HYSCM DLLGR GKL EA + + MP + W
Sbjct: 459 GRVEEGW--NYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGW 516
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
+LL AC+ H NIE+ A + +LEP +AAPYV ++N YA GRW+ VA +R M+
Sbjct: 517 ASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDR 576
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
VKK PG S + + F AED H + Y L+ ++ + Y ++W
Sbjct: 577 GVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRW 631
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 166/354 (46%), Gaps = 34/354 (9%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI---- 202
L + I + LS KS+HS I + N +I Y+KC L A F I
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 203 -------------EERL------------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
E R +VS+N++++ + +L + M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G +D T+ +++++ C + + G+L HS + GFD VSV N L++ Y K GD+D
Sbjct: 134 MGLDMDGFTLSAVITA-CCDDVGLIGQL-HSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 298 ARVLFDGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A+ +F G+ R VSW +MI Y Q + +AL LF M G D+ T+ S+++
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC-GSIGDARELFYALPEKIVVSWT 415
L G F G N V + LID+YSKC G + D R++F + E +V W
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 416 TMIAGCALNGEFVE-ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
TM++G + N EF+E AL+ F Q+ + RPN +F+ V+ AC++ +G I
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 145/330 (43%), Gaps = 23/330 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I E K L LF++M + + + T + A L DL HG ++
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLI 267
Query: 82 KSPFVKCDRL----------------DCAYKIFDEMAVRDVASWNAMLVGFAQ-MGFLEN 124
K+ F + + DC K+F+E+ D+ WN M+ G++Q FLE+
Sbjct: 268 KTGFHQNSHVGSGLIDLYSKCGGGMSDCR-KVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 183
L F M+ +G + + + + + A + S K +HS + + ++ +SV N I
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y+KC +L+ A +F + E VS NSM+AG +SL+ ++ M+
Sbjct: 387 AMYSKCGNLQDARRLFDRMAE--HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPT 444
Query: 244 VTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T +S+LS+ + +G + + + + + +I + + G + A L
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 303 DGIC-DRTRVSWTAMISGYAQKGDLDEALR 331
+ + + W +++ G+++ A++
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVK 534
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 208/636 (32%), Positives = 327/636 (51%), Gaps = 32/636 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + + L LF M + D++ N T + K CA +L Q+IH I+
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341
Query: 82 K-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + F+ C +D A +F + D+ W+A++ Q G E ++
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ MRL + T+ L AA + +L +S+H+ G + DV+V N ++ Y
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 188 K--C--DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
K C D K+ E + R ++SWN+ ++G +D L + HM+ GF +
Sbjct: 462 KNGCVHDGTKLYESMV------DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPN 515
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ T +S+L S C + GR VH+H I D + V LI MY+KC ++ A V F+
Sbjct: 516 MYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFN 575
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R +WT +I+ YAQ ++AL F M+ G P+ T+ +SGC +LE
Sbjct: 576 RLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEG 635
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ + G ++ V +AL+DMY+KCG + +A LF AL + ++W T+I G A
Sbjct: 636 GQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQ 695
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG+ +AL F +++ + P+ VTF +L AC+H G +E+G Y D GIS P
Sbjct: 696 NGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGIS--PT 753
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+DH +CM D+LGR GK E DF+Q M + +A IW T+L A K+H N+ +GE A LF
Sbjct: 754 VDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLF 813
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+L+P + Y+ ++N +A GRWD V +R++M VKK PG S NG+ TF + D
Sbjct: 814 ELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHD 873
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
H + + + LD L RE A ++++P+ E
Sbjct: 874 YSHPQIQEIHLKLDEL---DRELA---SIQYVPKTE 903
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 251/519 (48%), Gaps = 22/519 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I+ V + A+ ++ LF++M+ I PN T KAC+ L + +H
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC ++ A K+F M ++ +WN +L G+AQ G + VL+
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M + ++ + T+ + + ++K+L + +HS I G + + + + Y+
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTT 246
KC A VF I++ +V W++++ + ++S+ + H+M G L + T
Sbjct: 361 KCGLAIDAIGVFKTIKK--PDIVVWSALITCLDQQGQSEESIKLF-HLMRLGDTLPNQYT 417
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ SLLS+ L G+ +H+ YGF+ DV+V N L++MY K G + L++ +
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
DR +SW A +SG G D L +F+ M G +P++ T +S++ C + G+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ L DN VC ALIDMY+KC + DA F L + + +WT +I A +
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ 597
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+AL+ F Q+ + ++PN T L C+ LE G + + + +S ++
Sbjct: 598 GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS---DMFV 654
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
S + D+ + G ++EA +++ I+ D W T++C
Sbjct: 655 GSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 200/410 (48%), Gaps = 16/410 (3%)
Query: 62 KACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVA 107
+ CA L ++ IHG IVK + + KC A + +M RDV
Sbjct: 120 RECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVV 179
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SW A++ G GF + + LF M+ GI + T+ +A L L K +H+
Sbjct: 180 SWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQA 239
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+G+ D+ V + + YAKC ++++A +F G+ E+ V+WN ++ G
Sbjct: 240 FKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQ--NDVTWNVLLNGYAQRGDVTG 297
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
L + MM + + T+ ++L + L QG+++HS I G++ + + L+
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSKCG A +F I V W+A+I+ Q+G +E+++LF M LP+ T
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ S++S +G L+ G+ G + +V V NAL+ MY K G + D +L+ ++
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
++ ++SW ++G G + L +F+ ++E PN TF+++L +C+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 143/278 (51%), Gaps = 10/278 (3%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L +L + +H + + D + +L+++Y+KC AR++ + DR
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
VSWTA+I G +G ++++ LF M+ G +P+ T+ + + C AL+LGK
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
A GL ++ V +AL+D+Y+KCG I A ++F +PE+ V+W ++ G A G+
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVT 296
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDH 486
L LF +MELD++ N T VL+ C ++ L++G I II+ +G +
Sbjct: 297 GVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF------ 350
Query: 487 YSC-MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
C + D+ + G +A+ +++ K D +W L+
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI 387
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 312/612 (50%), Gaps = 28/612 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS I + ++ L LF++M + +P+ +T + ACA + L + H + +
Sbjct: 320 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI 379
Query: 82 KSPF-----VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
K+ V+ LD K D+ + + + + Q+ L ++F M++ G
Sbjct: 380 KAGMTSDIVVEGSLLDLYVK------CSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEG 433
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
I + T + + L + +H+ + G +V V + I YAK L A
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL 493
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
+F ++E VVSW +M+AG T DKF ++LN ++ M G + D S +S+
Sbjct: 494 KIFRRLKEN--DVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAG 551
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
+AL QGR +H+ G+ D+S+ N L+S+Y++CG + A FD I + VSW ++
Sbjct: 552 IQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSL 611
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
+SG+AQ G +EAL +F M AG + T S +S + +GK G
Sbjct: 612 VSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGY 671
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
V NALI +Y+KCG+I D +SW +MI G + +G EAL LF
Sbjct: 672 DSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFED 718
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ +LD+ PN VTF+ VL AC+H G +++G IS + + + P+ +HY+C+ DLLGR
Sbjct: 719 MKQLDVLPNHVTFVGVLSACSHVGLVDEG--ISYFRSMSEAHNLVPKPEHYACVVDLLGR 776
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G L A FV+ MPI+ DA +W TLL AC +H NI+IGE+ A L +LEP +A YV +
Sbjct: 777 SGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLV 836
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+N YA+ G+WD R MMK VKK PG+S ++ F A D+ H +++ Y L
Sbjct: 837 SNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYL 896
Query: 617 DCLALHSREEAY 628
L + E Y
Sbjct: 897 RGLDFRAAENGY 908
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 240/518 (46%), Gaps = 52/518 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA------KLSDLIYSQM 75
WN + + + LFR+M ++E + F + + C+ + + I+++
Sbjct: 131 WNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKT 190
Query: 76 IHGHIVKSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
I S F+ K L A K+F+ + RD SW AM+ G +Q G+ E +
Sbjct: 191 ITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAM 250
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF + L A + K +H + G ++ VCN ++ Y
Sbjct: 251 LLFCQIVL--------------SACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLY 296
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++ +L AE +F + +R R VS+NS+++G + +L ++ M + + D T
Sbjct: 297 SRSGNLSSAEQIFHCMSQRDR--VSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVT 354
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V SLLS+ AL G+ HS+ I G D+ V +L+ +Y KC DI +A F +C
Sbjct: 355 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF--LC 412
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
Y Q +L+++ ++F M+ G +P+ T S++ C GA +LG+
Sbjct: 413 -------------YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQ 459
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G + NV V + LIDMY+K G + A ++F L E VVSWT MIAG + +
Sbjct: 460 IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDK 519
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS-YNPELD 485
F EAL+LF ++ + ++ + + F + + AC L++G I + +S Y+ +L
Sbjct: 520 FTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI----HAQSCLSGYSDDLS 575
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + L R GK++EA + K + W +L+
Sbjct: 576 IGNALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSLV 612
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 196/426 (46%), Gaps = 37/426 (8%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRD 105
+ AC K+ + + +HG ++K F + L A +IF M+ RD
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
S+N+++ G AQ G++ L LF M L + D VTV L A L K HS
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMA-ELVFCGIEERLRTVVSWNSMVAGCTYG-- 222
+ I G+ +D+ V + + Y KC D+K A E C YG
Sbjct: 377 YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLC--------------------YGQL 416
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
D + S + M G + T S+L + A G +H+ + GF +V V
Sbjct: 417 DNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS 476
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+ LI MY+K G +D A +F + + VSWTAMI+GY Q EAL LF M+ G
Sbjct: 477 SVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIK 536
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
D + S IS C AL+ G+ +C G D++ + NAL+ +Y++CG + +A
Sbjct: 537 SDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAA 596
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + K VSW ++++G A +G F EAL++F Q+ + L N TF + + A + +
Sbjct: 597 FDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANV 656
Query: 463 EKGWAI 468
G I
Sbjct: 657 RIGKQI 662
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 224/486 (46%), Gaps = 41/486 (8%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVR 104
M+Q+ + N+ TF ++ + C L G + ++ L+CA +FDEM +R
Sbjct: 72 MEQHGVRANSQTFLWLLEGC-----LNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIR 126
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKSV 163
++ WN + F + V LF M ++ D + + L + +A ++ +
Sbjct: 127 SLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQI 186
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H+ I G ++ +CN I Y K L A+ VF + + R VSW +M++G +
Sbjct: 187 HAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL--KARDSVSWVAMISGLSQNG 244
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
++++ + + +LS+ E G+ +H + GF + V N
Sbjct: 245 YEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCN 290
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+++YS+ G++ SA +F + R RVS+ ++ISG AQ+G ++ AL LF M + P
Sbjct: 291 ALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D VTV S++S C GAL GK F +YA G+ +++V +L+D+Y KC I A E F
Sbjct: 351 DCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF 410
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ LN F +F Q+ + PN+ T+ ++L+ CT G +
Sbjct: 411 LCYGQLD-----------NLNKSF----QIFTQMQIEGIVPNQFTYPSILKTCTTLGATD 455
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G I Q G +N + S + D+ + GKL AL + + ++D W ++
Sbjct: 456 LGEQIH-TQVLKTGFQFNVYVS--SVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMI 511
Query: 524 CACKIH 529
H
Sbjct: 512 AGYTQH 517
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 34/261 (13%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
++ R + + + W + I ++ + L LF++M+ I+ +N+ F ACA +
Sbjct: 494 KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQ 553
Query: 69 DLIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + IH G+ + S + +C ++ AY FD++ +D SWN+++
Sbjct: 554 ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVS 613
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GFAQ G+ E L +F M G++ + T AA + ++ + K +H G D+
Sbjct: 614 GFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDS 673
Query: 175 DVSVCNTWISSYAKC---DDLKMAELVF------CGIE-----------ERLRTVVSWNS 214
+ V N I+ YAKC DD+ ++ CG E + L V++
Sbjct: 674 ETEVSNALITLYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVG 733
Query: 215 MVAGCTYGDKFDDSLNFYRHM 235
+++ C++ D+ ++++R M
Sbjct: 734 VLSACSHVGLVDEGISYFRSM 754
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 208/636 (32%), Positives = 327/636 (51%), Gaps = 32/636 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + + L LF M + D++ N T + K CA +L Q+IH I+
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341
Query: 82 K-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + F+ C +D A +F + D+ W+A++ Q G E ++
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ MRL + T+ L AA + +L +S+H+ G + DV+V N ++ Y
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 188 K--C--DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
K C D K+ E + R ++SWN+ ++G +D L + HM+ GF +
Sbjct: 462 KNGCVHDGTKLYESMV------DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPN 515
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ T +S+L S C + GR VH+H I D + V LI MY+KC ++ A V F+
Sbjct: 516 MYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFN 575
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R +WT +I+ YAQ ++AL F M+ G P+ T+ +SGC +LE
Sbjct: 576 RLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEG 635
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ + G ++ V +AL+DMY+KCG + +A LF AL + ++W T+I G A
Sbjct: 636 GQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQ 695
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG+ +AL F +++ + P+ VTF +L AC+H G +E+G Y D GIS P
Sbjct: 696 NGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGIS--PT 753
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+DH +CM D+LGR GK E DF+Q M + +A IW T+L A K+H N+ +GE A LF
Sbjct: 754 VDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLF 813
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+L+P + Y+ ++N +A GRWD V +R++M VKK PG S NG+ TF + D
Sbjct: 814 ELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHD 873
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
H + + + LD L RE A ++++P+ E
Sbjct: 874 YSHPQIQEIHLKLDEL---DRELA---SIQYVPKTE 903
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 251/519 (48%), Gaps = 22/519 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I+ V + A+ ++ LF++M+ I PN T KAC+ L + +H
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC ++ A K+F M ++ +WN +L G+AQ G + VL+
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M + ++ + T+ + + ++K+L + +HS I G + + + + Y+
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS 360
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTT 246
KC A VF I++ +V W++++ + ++S+ + H+M G L + T
Sbjct: 361 KCGLAIDAIGVFKTIKK--PDIVVWSALITCLDQQGQSEESIKLF-HLMRLGDTLPNQYT 417
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ SLLS+ L G+ +H+ YGF+ DV+V N L++MY K G + L++ +
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
DR +SW A +SG G D L +F+ M G +P++ T +S++ C + G+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ L DN VC ALIDMY+KC + DA F L + + +WT +I A +
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ 597
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+AL+ F Q+ + ++PN T L C+ LE G + + + +S ++
Sbjct: 598 GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS---DMFV 654
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
S + D+ + G ++EA +++ I+ D W T++C
Sbjct: 655 GSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 200/410 (48%), Gaps = 16/410 (3%)
Query: 62 KACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVA 107
+ CA L ++ IHG IVK + + KC A + +M RDV
Sbjct: 120 RECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVV 179
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SW A++ G GF + + LF M+ GI + T+ +A L L K +H+
Sbjct: 180 SWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQA 239
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+G+ D+ V + + YAKC ++++A +F G+ E+ V+WN ++ G
Sbjct: 240 FKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQ--NDVTWNVLLNGYAQRGDVTG 297
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
L + MM + + T+ ++L + L QG+++HS I G++ + + L+
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSKCG A +F I V W+A+I+ Q+G +E+++LF M LP+ T
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ S++S +G L+ G+ G + +V V NAL+ MY K G + D +L+ ++
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
++ ++SW ++G G + L +F+ ++E PN TF+++L +C+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 143/278 (51%), Gaps = 10/278 (3%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L +L + +H + + D + +L+++Y+KC AR++ + DR
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
VSWTA+I G +G ++++ LF M+ G +P+ T+ + + C AL+LGK
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
A GL ++ V +AL+D+Y+KCG I A ++F +PE+ V+W ++ G A G+
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVT 296
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDH 486
L LF +MELD++ N T VL+ C ++ L++G I II+ +G +
Sbjct: 297 GVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF------ 350
Query: 487 YSC-MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
C + D+ + G +A+ +++ K D +W L+
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALI 387
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 303/612 (49%), Gaps = 20/612 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I V +++ + +FR+M + PN F + AC DL + +HG +
Sbjct: 172 SWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAV 231
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V++ + K ++ A +F++M DV SWNA + G G L
Sbjct: 232 VRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRAL 291
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M+ G+ + T+ + +A A +L + +H F + D D V + Y
Sbjct: 292 ELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMY 351
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV-- 244
AK L A VF + R ++ WN++++GC++ + + L+ + M G LDV
Sbjct: 352 AKHGFLDDARKVFDFMPRR--DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNR 409
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TT+ S+L S EA+ R VH+ G D VIN LI Y KCG +D A +F
Sbjct: 410 TTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+S T M++ +Q ++A++LF M G PD + S+++ C A E G
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K + +V NAL+ Y+KCGSI DA F LPE+ +VSW+ MI G A +
Sbjct: 530 KQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQH 589
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G ALDLFH++++ + PN +T +VL AC H G ++ + GI E
Sbjct: 590 GHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEE- 648
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
HY+CM D+LGR GKL++A++ V +MP +++A +WG LL A ++H + E+G A LF
Sbjct: 649 -HYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFT 707
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP + +V +AN YA G WD +A +R +MK + VKK P S I K TF D+
Sbjct: 708 LEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDK 767
Query: 605 YHAESELTYPVL 616
H + Y L
Sbjct: 768 SHPMTRDIYGKL 779
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 198/409 (48%), Gaps = 19/409 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
++ + WN+ I V H+ L L QMK + + PN T + KACA +
Sbjct: 268 AADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQ 327
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IHG +VK+ + K LD A K+FD M RD+ WNA++ G + G
Sbjct: 328 IHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGR 387
Query: 122 LENVLRLFYNMRLVGIQADF--VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
VL LF+ MR G+ D T+ + ++ ++ + + VH+ IG+ +D V
Sbjct: 388 HGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVI 447
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I SY KC L A VF E R ++S +M+ + D +D++ + M+ G
Sbjct: 448 NGLIDSYWKCGQLDYAIKVF--KESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG 505
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D + SLL++ A QG+ VH+H I F DV N L+ Y+KCG I+ A
Sbjct: 506 LEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDAD 565
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+ F G+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++S C +G
Sbjct: 566 MAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAG 625
Query: 360 AL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ + K+F++ + G+ +ID+ + G + DA EL +P
Sbjct: 626 LVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMP 674
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 193/397 (48%), Gaps = 21/397 (5%)
Query: 76 IHGHIVKSP------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+H H++KS + +C A +FDE+ SW++++ ++ G
Sbjct: 26 LHSHLLKSGLLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPR 85
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ L F MR G+ + + + + A + VH+ + + DV V N +
Sbjct: 86 DALLAFRAMRGRGVPCNEFALPVVLKCAPDVR---FGAQVHALAVATRLVHDVFVANALV 142
Query: 184 SSYAKCDDLKMAELVF---CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ Y + A +F G+ R VSWN+M++ D+ D++ +R M+++G
Sbjct: 143 AVYGGFGMVDEARRMFDEYVGVGGE-RNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGE 201
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
R + ++++ L GR VH + G++ DV N L+ MYSK GDI+ A
Sbjct: 202 RPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAAT 261
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + VSW A ISG G AL L M+++G +P++ T+ S++ C +GA
Sbjct: 262 VFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGA 321
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LG+ + + V L+DMY+K G + DAR++F +P + ++ W +I+G
Sbjct: 322 FNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISG 381
Query: 421 CALNGEFVEALDLFHQLME--LDLRPNRVTFLAVLQA 455
C+ +G E L LFH++ + LDL NR T +VL++
Sbjct: 382 CSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKS 418
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 202/464 (43%), Gaps = 23/464 (4%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC------AKLSDL-IYS 73
W+S + N LL FR M+ + N P + K A++ L + +
Sbjct: 70 SWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQVHALAVAT 129
Query: 74 QMIHGHIVKSPFVKC----DRLDCAYKIFDEM----AVRDVASWNAMLVGFAQMGFLENV 125
+++H V + V +D A ++FDE R+ SWN M+ + + +
Sbjct: 130 RLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDA 189
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ +F M G + + + A ++ L + VH + G + DV N +
Sbjct: 190 IGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDM 249
Query: 186 YAKCDDLKMAELVFCGIEERLRT--VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+K D++MA VF E++ VVSWN+ ++GC +L M +G +
Sbjct: 250 YSKLGDIEMAATVF----EKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPN 305
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
V T+ S+L + A GR +H + D D V L+ MY+K G +D AR +FD
Sbjct: 306 VFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFD 365
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL--VTVLSMISGCGQSGAL 361
+ R + W A+ISG + G E L LF M G D+ T+ S++ S A+
Sbjct: 366 FMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAI 425
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ A GL + V N LID Y KCG + A ++F ++S TTM+
Sbjct: 426 CHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTAL 485
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ +A+ LF Q++ L P+ ++L ACT E+G
Sbjct: 486 SQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 165/370 (44%), Gaps = 19/370 (5%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+HS + G+ A S N ++ Y++C A VF I + VSW+S+V +
Sbjct: 26 LHSHLLKSGLLAGFS--NHLLTLYSRCRLPSAARAVFDEIPDPCH--VSWSSLVTAYSNN 81
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
D+L +R M G + + +L C + G VH+ + DV V
Sbjct: 82 GMPRDALLAFRAMRGRGVPCNEFALPVVLK---CAPDVRFGAQVHALAVATRLVHDVFVA 138
Query: 283 NTLISMYSKCGDIDSARVLFD---GIC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
N L+++Y G +D AR +FD G+ +R VSW MIS Y + +A+ +F M
Sbjct: 139 NALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVW 198
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+GE P+ +++ C S LE G+ G + +V NAL+DMYSK G I
Sbjct: 199 SGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEM 258
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F +P VVSW I+GC +G AL+L Q+ L PN T +VL+AC
Sbjct: 259 AATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAG 318
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMPIKSDA 516
G G I + + D + + D+ + G L +A MP + D
Sbjct: 319 AGAFNLGRQIHGFM-----VKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP-RRDL 372
Query: 517 GIWGTLLCAC 526
+W L+ C
Sbjct: 373 ILWNALISGC 382
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/639 (30%), Positives = 328/639 (51%), Gaps = 28/639 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + W S + + L LF QM+ I+PN TF + A +
Sbjct: 154 RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGV 213
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H ++KS + K + A +FD M R+ SWN+M+ GF G
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273
Query: 121 FLENVLRLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
LFY MRL G+ Q F TV+ L + K +S K +H I G D D++
Sbjct: 274 LDLEAFELFYRMRLEGVKLTQTIFATVIKL---CANIKEMSFAKQLHCQVIKNGSDFDLN 330
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ + +Y+KC ++ A +FC + ++ VVSW ++++G + D ++N + M
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLFC-MMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G R + T ++L++ A V +H+ + ++ SV L YSK GD +
Sbjct: 390 EGVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANE 445
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +F+ I ++ V+W+AM+SGYAQ GD++ A+++F + G P+ T S+++ C
Sbjct: 446 AAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAA 505
Query: 358 -SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ ++E GK F + + G + + V +AL+ MY+K G+I A E+F ++ +VSW +
Sbjct: 506 PTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNS 565
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
MI+G A +G ++L +F ++ +L + +TF+ V+ ACTH G + +G + D
Sbjct: 566 MISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDY 625
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
I P ++HYSCM DL R G L++A+D + MP + A IW TLL AC++HLN+++GE
Sbjct: 626 HIV--PTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGE 683
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A L L+P +A YV ++N YA G W A +R +M +VKK G S + KT
Sbjct: 684 LAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKT 743
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
+F A D H +S+ Y L+ L++ ++ Y K++
Sbjct: 744 FSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYV 782
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 224/467 (47%), Gaps = 47/467 (10%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N Q +EA+N LF ++++ + + + K C L D I + +H +K
Sbjct: 70 NDQNKEALN---------LFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 83 SPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
FV K + ++ ++FDEM V++V SW ++L G+ Q G E L+L
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M+L GI+ + T + + VH+ I G+D+ + V N+ ++ Y+K
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ A+ VF +E R VSWNSM+AG T G + FYR M G +L T
Sbjct: 241 SLMVSDAKAVFDSMEN--RNAVSWNSMIAGFVTNGLDLEAFELFYR-MRLEGVKLTQTIF 297
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF---DG 304
+++ + + + +H I G D D+++ L+ YSKC +ID A LF G
Sbjct: 298 ATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHG 357
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG-----QSG 359
+ + VSWTA+ISGY Q G D A+ LF M G P+ T ++++ Q
Sbjct: 358 V--QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIH 415
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL + ++N G AL D YSK G +A ++F + EK +V+W+ M++
Sbjct: 416 ALVVKTNYENSPSVG---------TALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLS 466
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH-TGFLEKG 465
G A G+ A+ +F QL + + PN TF +VL AC T +E+G
Sbjct: 467 GYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQG 513
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 171/363 (47%), Gaps = 3/363 (0%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+ ++FDE + ++ N +L F++ + L LF +R G D ++ + +
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ K VH I G DVSV + + Y K + ++ E VF E R++ VVSW
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVF--DEMRVKNVVSWT 162
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
S++AG + +L + M G + + T ++L A+ +G VH+ I
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS 222
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G D + V N++++MYSK + A+ +FD + +R VSW +MI+G+ G EA LF
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ M G ++I C + K G ++ + AL+ YSKC
Sbjct: 283 YRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKC 342
Query: 394 GSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
I DA +LF + + VVSWT +I+G NG A++LF Q+ +RPN T+ +
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTI 402
Query: 453 LQA 455
L A
Sbjct: 403 LTA 405
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%)
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
++ LFD + ++ +++ EAL LF + +G D ++ ++ CG
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+GK G ++V V +L+DMY K S+ D +F + K VVSWT++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+AG NG +AL LF Q+ ++PN TF AVL G +EKG
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 337/636 (52%), Gaps = 26/636 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V + + L LF+ M + + + T+ + ++CA LS +HGH +
Sbjct: 207 WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHAL 266
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KC+R+ A+K+F+ + S+NA++VG+A+ L
Sbjct: 267 KSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALD 326
Query: 128 LFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F +++ + D +++ G LT ++ +HL ++ +H + G+ ++ V NT + Y
Sbjct: 327 IFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQ-LHGLAVKCGLGFNICVANTILDMY 385
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC L A L+F +E R VSWN+++A ++ +L+ + M+ + D T
Sbjct: 386 GKCGALMEACLIFEEMERR--DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFT 443
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S++ + +AL G +H I G LD V + L+ MY KCG + A + +
Sbjct: 444 YGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLE 503
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++T VSW ++ISG++ + + A R F M G +PD T +++ C +ELGK
Sbjct: 504 EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQ 563
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
L +V + + L+DMYSKCG++ D+R +F P++ V+W+ MI A +G
Sbjct: 564 IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGL 623
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY---NPE 483
+A++LF ++ L+++PN F++VL+AC H G+++KG + Y K +S+ +P+
Sbjct: 624 GEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKG-----LHYFQKMLSHYGLDPQ 678
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HYSCM DLLGR G++ EAL ++SMP ++D IW TLL CK+ N+E+ E L
Sbjct: 679 MEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL 738
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+L+P ++ YV +AN YA+ G W VA +R++MK ++KK PG S + + TF D
Sbjct: 739 QLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGD 798
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
+ H SE Y L + Y + ++ + E
Sbjct: 799 KAHPRSEEIYEQTHLLVDEMKWAGYVPDIDFMLDEE 834
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 241/524 (45%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WNS + ++ K++ +F +M+ I + TF I KAC+ + D +H
Sbjct: 106 WNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAI 165
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + + KC +LD A+++F EM R++ W+A++ G+ Q L+
Sbjct: 166 QMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLK 225
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M VG+ T + ++ L +H + D + + YA
Sbjct: 226 LFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYA 285
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC+ + A VF + R S+N+++ G D+ +L+ ++ + N D ++
Sbjct: 286 KCERMFDAWKVFNTLPNPPRQ--SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISL 343
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
L++ + ++G +H + G ++ V NT++ MY KCG + A ++F+ +
Sbjct: 344 SGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMER 403
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ + Q ++ + L LF +M + PD T S++ C AL G
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEI 463
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G+ + V +AL+DMY KCG + +A ++ L EK VSW ++I+G + +
Sbjct: 464 HGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQS 523
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELD 485
A F Q++E+ + P+ T+ VL C + +E G I I++ + + ++
Sbjct: 524 ENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILK-----LQLHSDVY 578
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G ++++ + P K D W ++CA H
Sbjct: 579 IASTLVDMYSKCGNMQDSRLMFEKAP-KRDYVTWSAMICAYAYH 621
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 146/590 (24%), Positives = 245/590 (41%), Gaps = 92/590 (15%)
Query: 55 LTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDE 100
LTF I + C+ L L + +H ++ + FV K +++ A+K+FD
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 101 MAVRDV-------------------------------ASWNAMLVGFAQMGFLENVLRLF 129
M RDV SWN++L + G + +F
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
MR + I D+ T + +A + L VH I +G + DV + + Y+KC
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
L A VF + E R +V W++++AG D+F + L ++ M+ G + +T S
Sbjct: 187 KKLDDAFRVFREMPE--RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
+ S A G +H H + F D + + MY+KC + A +F+ + +
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
R S+ A+I GYA++ +AL +F +++ D +++ ++ C G
Sbjct: 305 RQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHG 364
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
A GL N+ V N ++DMY KCG++ +A +F + + VSW +IA N E V+
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY-- 487
L LF ++ + P+ T+ +V++AC L G I + I LD +
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIH-----GRIIKSGMGLDWFVG 479
Query: 488 SCMADLLGRKGKLKEALD--------------------------------FVQ--SMPIK 513
S + D+ G+ G L EA F Q M I
Sbjct: 480 SALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGII 539
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS----AAPYVEMANK 559
D + T+L C IE+G+ + + KL+ HS A+ V+M +K
Sbjct: 540 PDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSK 589
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R+ +T++ WNS I ++ ++ F QM + I P+N T+ + CA ++ +
Sbjct: 501 RLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIE 559
Query: 72 YSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ IH I+K + KC + + +F++ RD +W+AM+ +A
Sbjct: 560 LGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYA 619
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG---IHIGVDA 174
G E + LF M+L+ ++ + + + +A H ++ K +H F H G+D
Sbjct: 620 YHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVD--KGLHYFQKMLSHYGLDP 677
Query: 175 DV 176
+
Sbjct: 678 QM 679
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 200/620 (32%), Positives = 315/620 (50%), Gaps = 35/620 (5%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDR 90
M ++ + PNN TFPF KAC+ L+D + IH H + + +VKC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR--LFYNMRLVGIQADFVTVMGLT 148
L A IF M RD+ +WNAML G+A G + + L M++ ++ + T++ L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDAD----------VSVCNTWISSYAKCDDLKMAELV 198
L+ SVH++ I + + V + + YAKC L A V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCP 257
F + R V+W++++ G + + ++ M+ G L T++ S L +
Sbjct: 181 FDAMPAR--NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASL 238
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ L G +H+ G D++ N+L+SMY+K G ID A LFD + + VS++A++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SGY Q G +EA +F M+A PD T++S+I C AL+ G+ GL
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLA 358
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+CNALIDMY+KCG I +R++F +P + +VSW TMIAG ++G EA LF ++
Sbjct: 359 SETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 418
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGISYNPELDHYSCMADLLG 495
L P+ VTF+ +L AC+H+G + +G W G P ++HY CM DLL
Sbjct: 419 NNLGFPPDGVTFICLLSACSHSGLVIEGKHW----FHVMGHGYGLTPRMEHYICMVDLLS 474
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G L EA +F+QSMP+++D +W LL AC+++ NI++G+ V+ + +L P +V
Sbjct: 475 RGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVL 534
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
++N Y+ GR+D A +R + K KK PG S ING F D+ H +S Y
Sbjct: 535 LSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRE 594
Query: 616 LDCLALHSREEAYSSHLKWI 635
LD + + ++ Y ++
Sbjct: 595 LDNILVGIKKLGYQPDTSFV 614
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 191/429 (44%), Gaps = 31/429 (7%)
Query: 22 WNSQIREAVNKNEAHKTL--LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WN+ + + H + LL QM+ + + PN T + A+ L +H +
Sbjct: 79 WNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAY 138
Query: 80 IVKS---P---------------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+++ P + KC L A ++FD M R+ +W+A++ G
Sbjct: 139 CIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGG 198
Query: 116 FAQMGFLENVLRLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
F + LF M G+ ++ +A HL + + +H+ GV A
Sbjct: 199 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 258
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D++ N+ +S YAK + A +F E ++ VS++++V+G + +++ ++
Sbjct: 259 DLTAGNSLLSMYAKAGLIDQAIALF--DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 316
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M D T+VSL+ + AL GR H I G + S+ N LI MY+KCG
Sbjct: 317 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGR 376
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
ID +R +F+ + R VSW MI+GY G EA LF M G PD VT + ++S
Sbjct: 377 IDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSA 436
Query: 355 CGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VV 412
C SG + GK WF GL + ++D+ S+ G + +A E ++P + V
Sbjct: 437 CSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVR 496
Query: 413 SWTTMIAGC 421
W ++ C
Sbjct: 497 VWVALLGAC 505
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 316/623 (50%), Gaps = 23/623 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDI-EPNNLTFPFIAKACAKLSDLIYSQM 75
S + WNS + + H TL +F+++ I P++ TFP + KA L +M
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH +VKS +V K + + + ++FDEM RDVASWN ++ F Q G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E L LF M G + + V++ A L K +H + G + D V +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y KCD L++A VF + + ++V+WNSM+ G + M+ G R
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRK--SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
TT+ S+L + L+ G+ +H + I + D+ V +LI +Y KCG+ + A +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F SW MIS Y G+ +A+ ++ M + G PD+VT S++ C Q AL
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E GK L+ + ++ +AL+DMYSKCG+ +A +F ++P+K VVSWT MI+
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+G+ EAL F ++ + L+P+ VT LAVL AC H G +++G GI
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI--E 544
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWGTLLCACKIHLNIEIGEYVAY 540
P ++HYSCM D+LGR G+L EA + +Q P SD A + TL AC +HL +G+ +A
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L + P A+ Y+ + N YA G WD +R MK ++K PG S ++ K C F
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 601 AEDRYHAESELTYPVLDCLALHS 623
AEDR H +E Y +CLAL S
Sbjct: 665 AEDRSHLRAENVY---ECLALLS 684
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 167/320 (52%), Gaps = 2/320 (0%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L + K L +K VH + +G+ DV +C + I+ Y C D A VF + R
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR- 68
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCPEALVQGRL 265
V WNS+++G + F D+L ++ ++ + D T +++ ++ GR+
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+ + G+ DV V ++L+ MY+K +++ +FD + +R SW +IS + Q G+
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
++AL LF ME++G P+ V++ IS C + LE GK G + + V +A
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY KC + ARE+F +P K +V+W +MI G G+ +++ ++++ RP+
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 446 RVTFLAVLQACTHTGFLEKG 465
+ T ++L AC+ + L G
Sbjct: 309 QTTLTSILMACSRSRNLLHG 328
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 10/270 (3%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAM 316
++L + +LVH + G DV + +LI++Y C D SAR +F+ R+ V W ++
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSL 77
Query: 317 ISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+SGY++ + L +F + + +PD T ++I G G LG+ G
Sbjct: 78 MSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSG 137
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+V+V ++L+ MY+K ++ ++F +PE+ V SW T+I+ +GE +AL+LF
Sbjct: 138 YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFG 197
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADL 493
++ PN V+ + AC+ +LE+G I K + ELD Y S + D+
Sbjct: 198 RMESSGFEPNSVSLTVAISACSRLLWLERGKEI-----HRKCVKKGFELDEYVNSALVDM 252
Query: 494 LGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G+ L+ A + Q MP KS W +++
Sbjct: 253 YGKCDCLEVAREVFQKMPRKSLVA-WNSMI 281
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 200/620 (32%), Positives = 315/620 (50%), Gaps = 35/620 (5%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDR 90
M ++ + PNN TFPF KAC+ L+D + IH H + + +VKC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR--LFYNMRLVGIQADFVTVMGLT 148
L A IF M RD+ +WNAML G+A G + + L M++ ++ + T++ L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDAD----------VSVCNTWISSYAKCDDLKMAELV 198
L+ SVH++ I + + V + + YAKC L A V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCP 257
F + R V+W++++ G + + ++ M+ G L T++ S L +
Sbjct: 181 FDAMPAR--NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASL 238
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ L G +H+ G D++ N+L+SMY+K G ID A LFD + + VS++A++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SGY Q G +EA +F M+A PD T++S+I C AL+ G+ GL
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLA 358
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+CNALIDMY+KCG I +R++F +P + +VSW TMIAG ++G EA LF ++
Sbjct: 359 SETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 418
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGISYNPELDHYSCMADLLG 495
L P+ VTF+ +L AC+H+G + +G W G P ++HY CM DLL
Sbjct: 419 NNLGFPPDGVTFICLLSACSHSGLVIEGKHW----FHVMGHGYGLTPRMEHYICMVDLLS 474
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G L EA +F+QSMP+++D +W LL AC+++ NI++G+ V+ + +L P +V
Sbjct: 475 RGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVL 534
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
++N Y+ GR+D A +R + K KK PG S ING F D+ H +S Y
Sbjct: 535 LSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRE 594
Query: 616 LDCLALHSREEAYSSHLKWI 635
LD + + ++ Y ++
Sbjct: 595 LDNILVGIKKLGYQPDTSFV 614
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 191/429 (44%), Gaps = 31/429 (7%)
Query: 22 WNSQIREAVNKNEAHKTL--LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WN+ + + H + LL QM+ + + PN T + A+ L +H +
Sbjct: 79 WNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAY 138
Query: 80 IVKS---P---------------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+++ P + KC L A ++FD M R+ +W+A++ G
Sbjct: 139 CIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGG 198
Query: 116 FAQMGFLENVLRLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
F + LF M G+ ++ +A HL + + +H+ GV A
Sbjct: 199 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 258
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D++ N+ +S YAK + A +F E ++ VS++++V+G + +++ ++
Sbjct: 259 DLTAGNSLLSMYAKAGLIDQAIALF--DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 316
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M D T+VSL+ + AL GR H I G + S+ N LI MY+KCG
Sbjct: 317 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGR 376
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
ID +R +F+ + R VSW MI+GY G EA LF M G PD VT + ++S
Sbjct: 377 IDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSA 436
Query: 355 CGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VV 412
C SG + GK WF GL + ++D+ S+ G + +A E ++P + V
Sbjct: 437 CSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVR 496
Query: 413 SWTTMIAGC 421
W ++ C
Sbjct: 497 VWVALLGAC 505
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/589 (33%), Positives = 305/589 (51%), Gaps = 29/589 (4%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNN--LTFPFIAKACAKLSDLIYSQMIHGHIVKS------- 83
N+ H ++ F + + + N + F + K ++L D++ + +H +I+KS
Sbjct: 112 NDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAADSFV 171
Query: 84 ------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
+ KC +L A K+FDE+ R V SW +M+V + Q E L LF MR +
Sbjct: 172 LTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFL 231
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ TV L A L K VH + I G++ + + + ++ Y KC D+ A
Sbjct: 232 DGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARS 291
Query: 198 VF-------CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
VF CG + L V W +M+ G T +L + + + T+ SL
Sbjct: 292 VFDEFSVSTCGGGDDL---VFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASL 348
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
LS+ E +V G+L+H + YG D D S+ N+L+ MY+KCG I A +F D+
Sbjct: 349 LSACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDV 407
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW ++ISGYAQ G EAL LF M LPD VTV+ ++S C GA ++G +
Sbjct: 408 VSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGF 467
Query: 371 ACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
A GL ++ V AL++ Y+KCG AR +F + EK V+W MI GC + G+ V
Sbjct: 468 ALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVG 527
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
+L LF +++ +L PN V F +L AC+H+G +E+G + I + K +++ P + HY+C
Sbjct: 528 SLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEG--LMIFDFMCKELNFVPSMKHYAC 585
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
M DLL R G L+EALDF+ MP++ G++G L C +H N + GE + +L P
Sbjct: 586 MVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQ 645
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A YV ++N YA GRW V +R M+K+ + K PG SL ++ T
Sbjct: 646 ACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMDVNNTT 694
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 210/433 (48%), Gaps = 26/433 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ W S I V A + L+LF +M++ ++ N T + AC KL L + +H
Sbjct: 199 SVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVH 258
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVR------DVASWNAMLVGFA 117
G+++K+ +VKC + A +FDE +V D+ W AM+VG+
Sbjct: 259 GYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYT 318
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q G+ + L LF + + I + VT+ L A +++ + K +H + G+D D S
Sbjct: 319 QRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTS 377
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ N+ + YAKC + A VF + + VVSWNS+++G ++L+ + M
Sbjct: 378 LRNSLVDMYAKCGLIPDAHYVFATTVD--KDVVSWNSVISGYAQSGSAYEALDLFNRMRM 435
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDID 296
F D TVV +LS+ A G +H + YG + V L++ Y+KCGD
Sbjct: 436 ESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDAT 495
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
SAR++FDG+ ++ V+W AMI G +GD +L LF M +P+ V ++++ C
Sbjct: 496 SARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACS 555
Query: 357 QSGALELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-W 414
SG +E G ++ C ++ ++D+ ++ G++ +A + +P + V +
Sbjct: 556 HSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVF 615
Query: 415 TTMIAGCALNGEF 427
+ GC L+ F
Sbjct: 616 GAFLHGCGLHSNF 628
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGE 341
TLIS+Y+ G + AR LF + T S+ +I + + + A G
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGS 131
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
DLV ++ Q + L D+ V +L+D YSKCG + DAR+
Sbjct: 132 FNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAADS-FVLTSLVDAYSKCGKLRDARK 190
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F +P++ VVSWT+MI N E L LF+++ E L N T +++ ACT G
Sbjct: 191 VFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGC 250
Query: 462 LEKG 465
L +G
Sbjct: 251 LHQG 254
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 194/608 (31%), Positives = 317/608 (52%), Gaps = 19/608 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I VN L + MK+ + +F I K A + + Q +H +V
Sbjct: 68 WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMV 127
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC+R++ A+++F + +R+ +WNA++ G+AQ+G
Sbjct: 128 KMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFW 187
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M L G++ D T L L VH+ + G+ +D +VCN I++Y+
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C ++ AE VF G E R +V+WNSM+A ++ +++ + M GF D+ T
Sbjct: 248 ECGSIEDAERVFDGAIET-RDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTY 306
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY--SKCGDIDSARVLFDGI 305
S++S+ QG+ +H I G + V + N+LI+MY S +D A +F+ +
Sbjct: 307 TSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL 366
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ VSW ++++G++Q G ++AL+ F M + + D +++ C L+LG+
Sbjct: 367 ENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 426
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
G + N V ++LI MYSKCG I DAR+ F A P+ ++W ++I G A +G
Sbjct: 427 QVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 486
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
ALDLF + + ++ + +TF+AVL AC+H G +E+GW+ D GI P ++
Sbjct: 487 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIP--PRME 544
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLLGR G+L EA +++MP + DA +W TLL AC+ +IE+ VA L +L
Sbjct: 545 HYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLEL 604
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP YV +++ + RW+ A+I+ +MK VKK PG S + + +F AEDR
Sbjct: 605 EPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRS 664
Query: 606 HAESELTY 613
H E Y
Sbjct: 665 HPNCEEIY 672
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 211/454 (46%), Gaps = 13/454 (2%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ S + KC + A K+F E + RD SWN M+ GF +G E L +M+ G D
Sbjct: 40 IISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVD 99
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
+ + + ++ + + VHS + +G + +V + + YAKC+ ++ A VF
Sbjct: 100 GYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFK 159
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH--MMYNGFRLDVTTVVSLLSSFVCPE 258
I +R V+WN++++G Y D F+ M G +D T LL+ P+
Sbjct: 160 SI--NIRNSVTWNALISG--YAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPD 215
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG-ICDRTRVSWTAMI 317
VH+ + +G D +V N +I+ YS+CG I+ A +FDG I R V+W +M+
Sbjct: 216 LHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSML 275
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ Y +EA +LF M+ G PD+ T S+IS + GK GL+
Sbjct: 276 AAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLE 335
Query: 378 DNVMVCNALIDMY--SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
V + N+LI MY S S+ +A +F +L K VSW +++ G + +G +AL F
Sbjct: 336 FLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFE 395
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+ + + F AVL++C+ L+ G + ++ + P S + +
Sbjct: 396 NMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS---GFEPNGFVASSLIFMYS 452
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G +++A + P K + W +L+ H
Sbjct: 453 KCGVIEDARKSFDATP-KDSSIAWNSLIFGYAQH 485
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 173/363 (47%), Gaps = 5/363 (1%)
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H I G A + N IS YAKC ++++A +F E R VSWN+M+AG
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFG--ETSQRDAVSWNTMIAGFVNLG 79
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
F+ +L F + M GF +D + S+L C + G+ VHS + G++ +V +
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGS 139
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MY+KC ++ A +F I R V+W A+ISGYAQ GD A L ME G
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEI 199
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T +++ +L GL + VCNA+I YS+CGSI DA +F
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259
Query: 404 -YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
A+ + +V+W +M+A +N + EA LF ++ L P+ T+ +V+ A
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQ 319
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
+G ++ + +G+ + + + L + EAL+ +S+ K D W ++
Sbjct: 320 GQGKSLHGLVI-KRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENK-DHVSWNSI 377
Query: 523 LCA 525
L
Sbjct: 378 LTG 380
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
SSF AL + + H I G + N +IS Y+KCG+I A +F R V
Sbjct: 10 SSFT---ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAV 66
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SW MI+G+ G+ + AL +M+ G D + S++ G G +E+G+ +
Sbjct: 67 SWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMM 126
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G + NV +AL+DMY+KC + DA E+F ++ + V+W +I+G A G+
Sbjct: 127 VKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGD 181
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 195/631 (30%), Positives = 318/631 (50%), Gaps = 19/631 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN + E ++L LF QM + I P+ + K LS + H
Sbjct: 381 NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAH 440
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+IVK S + K + + A +F+ M +D SWN+++ G + G
Sbjct: 441 GYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNS 500
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M G + D VT++ + A +++ + VH + + G+ + S+ N +
Sbjct: 501 EAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALL 560
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+ C D + +F + ++ VVSW +M+ FD + M+ +G R D
Sbjct: 561 DMYSNCSDWQSTNQIFRSMGQK--NVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPD 618
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
V V S L +F E+L QG+ VH + I G + + V N L+ MY KC +++ AR++FD
Sbjct: 619 VFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFD 678
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ ++ +SW +I GY++ +E+ LF M P+ VT+ ++ +LE
Sbjct: 679 RVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFR-PNAVTMTCILPAAASISSLER 737
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ YA G ++ NAL+DMY KCG++ AR LF L +K ++SWT MIAG +
Sbjct: 738 GREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGM 797
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G A+ LF Q+ + P+ +F A+L AC H+G +G + K P+
Sbjct: 798 HGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGR--RFFKAMQKEYKIEPK 855
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
L HY+C+ DLL R G LKEAL+F++SMPI+ D+ IW +LL C+IH N+++ E VA +F
Sbjct: 856 LKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVF 915
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
KLEP + YV +AN YA RW+ V ++ + +++ G S + K F A++
Sbjct: 916 KLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADN 975
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKW 634
R H + LD +A R+E + K+
Sbjct: 976 RNHPDWNRIAEFLDDVARRMRQEGHDPKKKY 1006
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 220/473 (46%), Gaps = 28/473 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I + + LF +M E +++T + ACA L + + +HG+
Sbjct: 272 SWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYS 331
Query: 81 VKSP------------------------FVKCDRLDCAYKIFDEMAVR-DVASWNAMLVG 115
VKS +VKC + A ++FD M+ + +V WN ++ G
Sbjct: 332 VKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGG 391
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+A++G E L LF M +GI D + L + H + + +G A
Sbjct: 392 YAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQ 451
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+VCN IS YAK + + A LVF + + +SWNS+++GC+ +++ + M
Sbjct: 452 CAVCNALISFYAKSNMIGDAVLVFNRMPRQ--DTISWNSVISGCSSNGLNSEAIELFIRM 509
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G LD T++S+L + GR+VH + + G + S+ N L+ MYS C D
Sbjct: 510 WTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDW 569
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
S +F + + VSWTAMI+ Y + G D+ L M G PD+ V S +
Sbjct: 570 QSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAF 629
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+L+ GK Y G++ + V NAL++MY KC ++ +AR +F + K V+SW
Sbjct: 630 AGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWN 689
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
T+I G + N E+ LF ++ L RPN VT +L A LE+G I
Sbjct: 690 TLIGGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREI 741
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 222/487 (45%), Gaps = 31/487 (6%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
+PP+ ++ + W S + + + + LFRQM+ + P+ + K +
Sbjct: 162 MPPQ------AADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVS 215
Query: 66 KLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
L L ++IHG + K + + +C R++ A ++FD M RD SWN+
Sbjct: 216 SLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNS 275
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----G 167
M+ G G+ + LF M G + VTV+ + A + + K+VH + G
Sbjct: 276 MIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSG 335
Query: 168 IHIGVDA------DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+ G+D+ D ++ + + Y KC D+ A VF + + V WN ++ G
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHV-WNLIMGGYAK 394
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+F++SL+ + M G D + LL C G + H + + GF +V
Sbjct: 395 VGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAV 454
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
N LIS Y+K I A ++F+ + + +SW ++ISG + G EA+ LF M G+
Sbjct: 455 CNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQ 514
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
D VT+LS++ C QS G+ Y+ GL + NAL+DMYS C +
Sbjct: 515 ELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQ 574
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F ++ +K VVSWT MI G F + L +++ +RP+ + L A
Sbjct: 575 IFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDES 634
Query: 462 LEKGWAI 468
L++G ++
Sbjct: 635 LKQGKSV 641
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 159/358 (44%), Gaps = 25/358 (6%)
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+Y KC DL A VF G+ + V W S+++ F ++++ +R M G D
Sbjct: 145 AYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDA 204
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
V +L +L +G ++H G +V N LI++YS+CG ++ A +FD
Sbjct: 205 HAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDS 264
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R +SW +MI G G A+ LF M + G VTVLS++ C G +G
Sbjct: 265 MHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIG 324
Query: 365 KWFDNYACSGGLK----------DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS- 413
K Y+ GL D+ + + L+ MY KCG + AR +F A+ K V
Sbjct: 325 KAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHV 384
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ-----ACTHTGFLEKGWAI 468
W ++ G A GEF E+L LF Q+ EL + P+ +L+ +C G + G+ +
Sbjct: 385 WNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIV 444
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + + + + + + +A+ MP + D W +++ C
Sbjct: 445 K--------LGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMP-RQDTISWNSVISGC 493
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRT---RVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
L+ Y KCGD+ AR +FDG+ + RV WT+++S YA+ GD EA+ LF M+ G
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRV-WTSLMSAYAKAGDFQEAVSLFRQMQCCGV 200
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
PD V ++ G+L G+ GL V NALI +YS+CG + DA
Sbjct: 201 SPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAAR 260
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F ++ + +SW +MI GC NG A+DLF ++ + VT L+VL AC G+
Sbjct: 261 VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320
Query: 462 LEKGWAI 468
G A+
Sbjct: 321 GLIGKAV 327
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 321/629 (51%), Gaps = 23/629 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN + + E + + FR M ++ + ++LT+ I A L+ L + I
Sbjct: 260 SDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI 319
Query: 77 HGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG +V+ + +VK ++ A ++F +M D+ SWN ++ G A+ G
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHIGVDADVSVCNT 181
E LRLF ++ G+ D T+ + +A + + + VH+ + G+ D V
Sbjct: 380 ECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTA 439
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I Y+K ++ AEL+F + + SWN+M+ G T D + ++L + M G +
Sbjct: 440 LIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T + + C L QG+ +H+ I F D+ VI+ ++ MY KCG++ SAR +
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ I V+WT +ISG + G+ ++AL + M AG PD T +++ C AL
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E GK + V +L+DMY+KCG+I DA LF + + V W MI G
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL 677
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY- 480
A +G EAL+ F+++ + P+RVTF+ VL AC+H+G + +D +Y
Sbjct: 678 AQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYK----NFDSMQKTYG 733
Query: 481 -NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
PE++HYSC+ D L R G ++EA V SMP ++ A ++ TLL AC++ + E GE VA
Sbjct: 734 VEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVA 793
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF ++P +A YV ++N YA +W+ + R MMKR VKK PG S + K F
Sbjct: 794 EKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLF 853
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAY 628
A DR H E++L Y ++ + +EE Y
Sbjct: 854 VAGDRSHEETDLIYNKVEYVMKRIKEEGY 882
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/525 (25%), Positives = 236/525 (44%), Gaps = 67/525 (12%)
Query: 34 EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK----------- 82
+ H+ +FR ++Q+ + T + K C S+ + G+ VK
Sbjct: 102 KTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAG 161
Query: 83 ---SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
+ + K R+ A +FD M VRDV WN M+ + +MG + VL LF G++
Sbjct: 162 ALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221
Query: 140 DFVTV----MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
D V+V MG+ + + + L +++ + D+DV+V N +SSY + +
Sbjct: 222 DCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGE---- 277
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
W ++++ +R M+ + D T + +LS
Sbjct: 278 ---------------GW--------------EAVDCFRDMIKSRVPCDSLTYIVILSVVA 308
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
L G+ +H + +G+D VSV N+ I+MY K G ++ AR +F + + +SW
Sbjct: 309 SLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNT 368
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE----LGKWFDNYA 371
+ISG A+ G + +LRLF + +G LPD T+ S++ C +LE +G+ A
Sbjct: 369 VISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC---SSLEESYCVGRQVHTCA 425
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
G+ + V ALID+YSK G + +A LF+ + SW M+ G ++ + EAL
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREAL 485
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
LF + E + +++TF +A L++G I + + ++ +L S +
Sbjct: 486 RLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIK---MRFHYDLFVISGIL 542
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
D+ + G++K A +P D W T++ C +E GE
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVA-WTTVISGC-----VENGE 581
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 207/485 (42%), Gaps = 61/485 (12%)
Query: 46 KQNDIEPNNLT---FPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKC 88
++ + P++L F + A A SDLI + H IV S + KC
Sbjct: 3 RKCSVSPSSLLPQWFSILRHAIAD-SDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61
Query: 89 DRLDCAYKIFD--EMAVRDVASWNAMLVGFAQMGFLENVLRL---FYNMRLVGIQADFVT 143
L A K+FD + RD+ ++NA+L +A G L +V + F+ RL+ T
Sbjct: 62 GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121
Query: 144 VMGLT---QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
L+ + + S +++ + + IG+ DV V ++ YAK ++ A ++F
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ +R VV WN M+ D+ L + +G R D +V ++L
Sbjct: 182 RMP--VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGV------ 233
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G F+ ++ + + C D D W +S Y
Sbjct: 234 ---------GKKTVFERELEQVRAYATKLFVCDD------------DSDVTVWNKTLSSY 272
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q G+ EA+ F M + D +T + ++S LELGK G V
Sbjct: 273 LQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFV 332
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V N+ I+MY K GS+ AR +F + E ++SW T+I+GCA +G +L LF L+
Sbjct: 333 SVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRS 392
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKG 498
L P++ T +VL+AC+ LE+ + + Q + LD + + + D+ + G
Sbjct: 393 GLLPDQFTITSVLRACSS---LEESYCVG-RQVHTCALKAGIVLDSFVSTALIDVYSKGG 448
Query: 499 KLKEA 503
K++EA
Sbjct: 449 KMEEA 453
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 312/604 (51%), Gaps = 22/604 (3%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------V 86
LFR M+ + + T + + C+ L + +MIHG +VK+ F
Sbjct: 149 LFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYA 208
Query: 87 KCDRLDCAYKIFD--EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
KC + A +F E ++ W AM+ G+AQ G + F M G++ + T
Sbjct: 209 KCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTF 268
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ A + VH F + G ++V V + + YAKC DLK A+ + +E+
Sbjct: 269 PTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMED 328
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
VVSWNS++ G +++L +++M ++D T S+L+ C + +
Sbjct: 329 D--DVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN--CCVVGSINPK 384
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH I GF+ V N L+ MY+K GD+D A +F+ + ++ +SWT++++GYAQ
Sbjct: 385 SVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNN 444
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+E+L++F M G PD V S++S C + LE GK GL+ + V N
Sbjct: 445 SHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYN 504
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+L+ MY+KCG + DA +F ++ K V++WT +I G A NG+ +L + ++ RP
Sbjct: 505 SLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRP 564
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+ +TF+ +L AC+H G +++G Q +K P +HY+CM DL GR GKL EA
Sbjct: 565 DFITFIGLLFACSHAGLVDEGR--KYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAK 622
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ M +K DA +W +LL AC++H N+E+ E A LF+LEP +A PYV ++N Y+
Sbjct: 623 QLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASR 682
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
+W+ VA IR +MK + K PG S IN + TF ++DR H Y +D + L +
Sbjct: 683 KWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIK 742
Query: 625 EEAY 628
E Y
Sbjct: 743 EAGY 746
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 205/438 (46%), Gaps = 24/438 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + +K + FR M +E N TFP I AC+ + + + +HG IV
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KC L A + + M DV SWN+++VGF + G E LR
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF NM ++ D T + + KSVH I G + V N + YA
Sbjct: 353 LFKNMHGRNMKIDDYTFPSVLNCCVVGSINP--KSVHGLIIKTGFENYKLVSNALVDMYA 410
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D+ A VF + E + V+SW S+V G + ++SL + M G D V
Sbjct: 411 KTGDMDCAYTVFEKMLE--KDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIV 468
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ L G+ VH I G SV N+L++MY+KCG +D A +F +
Sbjct: 469 ASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV 528
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
+ ++WTA+I GYAQ G +L+ + AM ++G PD +T + ++ C +G ++ G K+
Sbjct: 529 KDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKY 588
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIAGCAL 423
F G+K +ID++ + G + +A++L + P+ V W ++++ C +
Sbjct: 589 FQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATV--WKSLLSACRV 646
Query: 424 NGEFVEALDLFHQLMELD 441
+ A L EL+
Sbjct: 647 HENLELAERAATNLFELE 664
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 236/504 (46%), Gaps = 34/504 (6%)
Query: 20 NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
NQ +Q+ ++ N+A K LF +M Q D + ++ MI
Sbjct: 69 NQLLNQLSKSGQVNDARK---LFDKMPQKD-------------------EYSWNTMI--- 103
Query: 80 IVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
S +V RL A ++FD + + +W++++ G+ + G LF +MRL G +A
Sbjct: 104 ---SSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKA 160
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
T+ + + + + +H F + G + +V V + YAKC + AE +F
Sbjct: 161 SQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLF 220
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
G+E + V W +MV G ++ F+R+M G + T ++L++ A
Sbjct: 221 KGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLA 280
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
G VH + GF +V V + L+ MY+KCGD+ +A+ + + + D VSW +++ G
Sbjct: 281 RCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVG 340
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+ + G +EALRLF M D T S+++ C G++ K G ++
Sbjct: 341 FVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN-CCVVGSIN-PKSVHGLIIKTGFENY 398
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+V NAL+DMY+K G + A +F + EK V+SWT+++ G A N E+L +F +
Sbjct: 399 KLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRV 458
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+ P++ ++L AC LE G + + + G+ ++ + Y+ + + + G
Sbjct: 459 TGVNPDQFIVASILSACAELTLLEFGKQVH-LDFIKSGLRWSQSV--YNSLVAMYAKCGC 515
Query: 500 LKEALDFVQSMPIKSDAGIWGTLL 523
L +A SM +K D W ++
Sbjct: 516 LDDADAIFVSMQVK-DVITWTAII 538
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 31/122 (25%)
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA----------------GC 421
+++ N L++ SK G + DAR+LF +P+K SW TMI+ GC
Sbjct: 63 ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122
Query: 422 ALN---------------GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
+ G VEA DLF + + ++ T +VL+ C+ G ++ G
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGE 182
Query: 467 AI 468
I
Sbjct: 183 MI 184
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 215/684 (31%), Positives = 332/684 (48%), Gaps = 79/684 (11%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L R+ S + WN IRE + + + + +M + P++ T P + KAC +L
Sbjct: 112 LERVTPSPAV-WWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPS 170
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVR---DVASWNAM 112
HG I + F +C L+ A IFDE+ R DV SWN++
Sbjct: 171 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 230
Query: 113 LVGFAQMGFLENVLRLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+ + L LF M L+ ++D ++++ + A K + K VH
Sbjct: 231 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 290
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I G DV V N I +YAKC ++ A VF +E + VVSWN+MVAG + F+
Sbjct: 291 AIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME--FKDVVSWNAMVAGYSQSGNFE 348
Query: 227 -----------------------------------DSLNFYRHMMYNGFRLDVTTVVSLL 251
++LN +R M+++G + T++S+L
Sbjct: 349 AAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVL 408
Query: 252 SSFVCPEALVQGRLVHSHGIHY----------GFDLDVSVINTLISMYSKCGDIDSARVL 301
S+ A QG +H++ + G D D+ V N LI MYSKC +AR +
Sbjct: 409 SACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI 468
Query: 302 FDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQ 357
FD I +R V+WT MI G+AQ GD ++AL+LF M E G P+ T+ ++ C
Sbjct: 469 FDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAH 528
Query: 358 SGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
A+ +GK Y ++ V N LIDMYSKCG + AR +F ++ +K +SWT
Sbjct: 529 LAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWT 588
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+M+ G ++G EALD+F ++ + P+ +TFL VL AC+H G +++G + D
Sbjct: 589 SMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSAD 648
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
G++ P +HY+C DLL R G+L +A V+ MP++ A +W LL AC++H N+E+
Sbjct: 649 YGLT--PRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELA 706
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E+ L ++ + Y ++N YA GRW VA IR +MK++ +KK PG S
Sbjct: 707 EHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKG 766
Query: 596 TCTFTAEDRYHAESELTYPVLDCL 619
T +F DR H S Y +L+ L
Sbjct: 767 TASFFVGDRSHPLSPQIYALLESL 790
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 167/384 (43%), Gaps = 57/384 (14%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++SY C A LV ER+ V WN ++ + D ++N M+ G
Sbjct: 96 VASYLACGATDYALLVL----ERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 151
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
R D T+ +L + + G H GF+ +V + N L++MYS+CG ++ A +
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211
Query: 301 LFDGICDR---TRVSWTAMISGYAQKGDLDEALRLFFAM------EAAGELPDLVTVLSM 351
+FD I R +SW +++S + + + AL LF M + E D+++++++
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ CG A+ K A G +V V NALID Y+KCG + +A ++F + K V
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331
Query: 412 VSWTTMIAGCALNGEFV-----------------------------------EALDLFHQ 436
VSW M+AG + +G F EAL+LF Q
Sbjct: 332 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 391
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS-------IIQYDDKGISYNPELDHYSC 489
++ PN VT ++VL AC G +G I ++ D+ + +L Y+
Sbjct: 392 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 451
Query: 490 MADLLGRKGKLKEALDFVQSMPIK 513
+ D+ + K A +P++
Sbjct: 452 LIDMYSKCRSFKAARSIFDDIPLE 475
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+++ Y CG D A ++ + + V W +I + ++G LD A+ + M AG PD
Sbjct: 95 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ ++ CG+ + G F C G + NV +CNAL+ MYS+CGS+ +A +F
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214
Query: 405 ALPEK---IVVSWTTMIAGCALNGEFVEALDLFHQLMEL------DLRPNRVTFLAVLQA 455
+ ++ V+SW ++++ + ALDLF ++ + + R + ++ + +L A
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274
Query: 456 C 456
C
Sbjct: 275 C 275
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 197/570 (34%), Positives = 303/570 (53%), Gaps = 18/570 (3%)
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYKI--FDEMAVRDVASWNAMLVGFAQMGFLENV 125
S LI S + H S ++ D Y + FD +A + WN ++ GF+ + V
Sbjct: 29 SILITSGLAHHTFFLSDILRSATKDLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMV 88
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG-----IHIGVDADVSVCN 180
L + +R G+ D T L +A S L++ + F + G+D D V N
Sbjct: 89 LVAYSRLRNHGVIPDRHTFPLLLKA------FSKLRNENPFQFYAHIVKFGLDFDAFVQN 142
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ +S++A C + + +F IE + VVSW +++ GC + ++L + M +G
Sbjct: 143 SLVSAFAHCGYVDCSRRLF--IETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGV 200
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSAR 299
+D T+VS+L + + GR VH + G + DV V + L+ MYSKCG D A
Sbjct: 201 EVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAV 260
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F+ + R VSW A+I+GY Q EAL++F M G P+ TV S ++ C Q G
Sbjct: 261 KVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLG 320
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+L+ G+W Y L N + AL+DMYSKCG + +A +F LP K V WT MI
Sbjct: 321 SLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMIN 380
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A+ G+ + +L+LF Q++ ++PN VTFL VL AC H G +++G + + D +
Sbjct: 381 GLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRL- 439
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P +DHY CM DLLGR G+L+EA+ F++SMP++ G+WG L C IH E+GE++
Sbjct: 440 -EPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIG 498
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L KL+PH + Y+ +AN Y+ +W+ AN+R +MK V K PG S +NG F
Sbjct: 499 NHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIEVNGVIHEF 558
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYS 629
A D+ H ES Y +L+ ++ + Y+
Sbjct: 559 IAFDKSHTESINVYMMLESVSAQLKLATYA 588
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 215/437 (49%), Gaps = 20/437 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR ++ L+ + +++ + + P+ TFP + KA +KL + Q + HIV
Sbjct: 72 WNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQF-YAHIV 130
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S F C +DC+ ++F E A +DV SW A++ G + G L
Sbjct: 131 KFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALE 190
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSY 186
F MR G++ D VT++ + AA + + + VH F + G V DV V + + Y
Sbjct: 191 CFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC A VF E R +VSW +++AG +++ ++L ++ M+ G + +T
Sbjct: 251 SKCGYCDDAVKVFN--EMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQST 308
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V S L++ +L QGR +H + L+ + L+ MYSKCG +D A ++F+ +
Sbjct: 309 VTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLP 368
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ WTAMI+G A +GD +L LF M + P+ VT L ++S C G ++ G +
Sbjct: 369 AKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLE 428
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
F C L+ NV ++D+ + G + +A + ++P E W + +GC ++
Sbjct: 429 LFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIH 488
Query: 425 GEFVEALDLFHQLMELD 441
F + + L++L
Sbjct: 489 KAFELGEHIGNHLIKLQ 505
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 215/684 (31%), Positives = 332/684 (48%), Gaps = 79/684 (11%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L R+ S + WN IRE + + + + +M + P++ T P + KAC +L
Sbjct: 119 LERVTPSPAV-WWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPS 177
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVR---DVASWNAM 112
HG I + F +C L+ A IFDE+ R DV SWN++
Sbjct: 178 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 237
Query: 113 LVGFAQMGFLENVLRLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+ + L LF M L+ ++D ++++ + A K + K VH
Sbjct: 238 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 297
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I G DV V N I +YAKC ++ A VF +E + VVSWN+MVAG + F+
Sbjct: 298 AIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME--FKDVVSWNAMVAGYSQSGNFE 355
Query: 227 -----------------------------------DSLNFYRHMMYNGFRLDVTTVVSLL 251
++LN +R M+++G + T++S+L
Sbjct: 356 AAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVL 415
Query: 252 SSFVCPEALVQGRLVHSHGIHY----------GFDLDVSVINTLISMYSKCGDIDSARVL 301
S+ A QG +H++ + G D D+ V N LI MYSKC +AR +
Sbjct: 416 SACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI 475
Query: 302 FDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQ 357
FD I +R V+WT MI G+AQ GD ++AL+LF M E G P+ T+ ++ C
Sbjct: 476 FDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAH 535
Query: 358 SGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
A+ +GK Y ++ V N LIDMYSKCG + AR +F ++ +K +SWT
Sbjct: 536 LAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWT 595
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+M+ G ++G EALD+F ++ + P+ +TFL VL AC+H G +++G + D
Sbjct: 596 SMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSAD 655
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
G++ P +HY+C DLL R G+L +A V+ MP++ A +W LL AC++H N+E+
Sbjct: 656 YGLT--PRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELA 713
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E+ L ++ + Y ++N YA GRW VA IR +MK++ +KK PG S
Sbjct: 714 EHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKG 773
Query: 596 TCTFTAEDRYHAESELTYPVLDCL 619
T +F DR H S Y +L+ L
Sbjct: 774 TASFFVGDRSHPLSPQIYALLESL 797
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 167/384 (43%), Gaps = 57/384 (14%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++SY C A LV ER+ V WN ++ + D ++N M+ G
Sbjct: 103 VASYLACGATDYALLVL----ERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 158
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
R D T+ +L + + G H GF+ +V + N L++MYS+CG ++ A +
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218
Query: 301 LFDGICDR---TRVSWTAMISGYAQKGDLDEALRLFFAM------EAAGELPDLVTVLSM 351
+FD I R +SW +++S + + + AL LF M + E D+++++++
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 278
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ CG A+ K A G +V V NALID Y+KCG + +A ++F + K V
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338
Query: 412 VSWTTMIAGCALNGEFV-----------------------------------EALDLFHQ 436
VSW M+AG + +G F EAL+LF Q
Sbjct: 339 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 398
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS-------IIQYDDKGISYNPELDHYSC 489
++ PN VT ++VL AC G +G I ++ D+ + +L Y+
Sbjct: 399 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 458
Query: 490 MADLLGRKGKLKEALDFVQSMPIK 513
+ D+ + K A +P++
Sbjct: 459 LIDMYSKCRSFKAARSIFDDIPLE 482
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+++ Y CG D A ++ + + V W +I + ++G LD A+ + M AG PD
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ ++ CG+ + G F C G + NV +CNAL+ MYS+CGS+ +A +F
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221
Query: 405 ALPEK---IVVSWTTMIAGCALNGEFVEALDLFHQLMEL------DLRPNRVTFLAVLQA 455
+ ++ V+SW ++++ + ALDLF ++ + + R + ++ + +L A
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281
Query: 456 C 456
C
Sbjct: 282 C 282
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 202/627 (32%), Positives = 323/627 (51%), Gaps = 28/627 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I + + ++++ QM Q+ P+ LTF I KAC D+ + +HGH++
Sbjct: 226 WTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVI 285
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + + ++ A +F ++ +D+ SW +M+ GF Q+G+ L
Sbjct: 286 KSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 345
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVH----SFGIHIGVDADVSVCNTW 182
LF +M G + G +A + + +H FG+ V A S+C+
Sbjct: 346 LFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDM- 404
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YAK L A F IE +VSWN+++A + ++++ F+ MM+ G
Sbjct: 405 ---YAKFGFLPSAIRAFYQIESP--DLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMP 459
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D T +SLL + P + QG +HS+ I G D + +V N+L++MY+KC ++ A +F
Sbjct: 460 DGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVF 519
Query: 303 DGICDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
+ + VSW A++S Q E RLF M + PD +T+ +++ C + +L
Sbjct: 520 KDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASL 579
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E+G ++ GL +V V N LIDMY+KCGS+ AR++F + +VSW+++I G
Sbjct: 580 EVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGY 639
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A G EAL+LF + L ++PN VT+L VL AC+H G +E+GW + GI
Sbjct: 640 AQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIP-- 697
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +H SCM DLL R G L EA +F++ M D +W TLL +CK H N++I E A
Sbjct: 698 PTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAEN 757
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ KL+P ++A V ++N +A G W VA +R +MK+ V+K PGQS + + F +
Sbjct: 758 ILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFS 817
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
ED H + Y +L+ L L ++ Y
Sbjct: 818 EDNSHQQRGDIYTMLEDLWLQMLDDGY 844
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 223/497 (44%), Gaps = 28/497 (5%)
Query: 46 KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRL 91
K + I+ + T+ + AC + L Y + IH HI+KS + KC L
Sbjct: 149 KNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSL 208
Query: 92 DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
A K FD M +R+V SW M+ G++Q G + + ++ M G D +T + +A
Sbjct: 209 KDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKAC 268
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
A + L + +H I G D + N IS Y + + A VF I + ++S
Sbjct: 269 CIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMIST--KDLIS 326
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGF----RLDVTTVVSLLSSFVCPEALVQGRLVH 267
W SM+ G T ++L +R M GF +V S S + PE GR +H
Sbjct: 327 WASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEF---GRQIH 383
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+G +V +L MY+K G + SA F I VSW A+I+ ++ GD++
Sbjct: 384 GMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVN 443
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EA+ F M G +PD +T LS++ CG + G +Y GL VCN+L+
Sbjct: 444 EAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLL 503
Query: 388 DMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
MY+KC ++ DA +F + E +VSW +++ C + + E LF ++ + +P+
Sbjct: 504 TMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDN 563
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+T +L C LE G + G+ + + + + D+ + G LK A D
Sbjct: 564 ITITTILGTCAELASLEVGNQVHCFSV-KSGLVVDVSVSNR--LIDMYAKCGSLKHARDV 620
Query: 507 VQSMPIKSDAGIWGTLL 523
S D W +L+
Sbjct: 621 FGSTQ-NPDIVSWSSLI 636
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 209/462 (45%), Gaps = 18/462 (3%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D + C + + R++++ + + + Q + E + ++ + IQ + T L
Sbjct: 105 DEIPCQFVCLIKQHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLI 164
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
A + L K +H + D+ + N ++ Y KC LK A F ++ LR
Sbjct: 165 LACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ--LRN 222
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
VVSW M++G + + +D++ Y M+ +G+ D T S++ + + GR +H
Sbjct: 223 VVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHG 282
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
H I G+D + N LISMY++ G I A +F I + +SW +MI+G+ Q G E
Sbjct: 283 HVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIE 342
Query: 329 ALRLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
AL LF M G P+ S+ S C E G+ GL NV +L
Sbjct: 343 ALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLC 402
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
DMY+K G + A FY + +VSW +IA + +G+ EA+ F Q+M L P+ +
Sbjct: 403 DMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGI 462
Query: 448 TFLAVLQACTHTGFLEKGWAISI----IQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
TFL++L AC + +G I I D + N L Y+ + L +A
Sbjct: 463 TFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYT-------KCSNLHDA 515
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
+ + + ++ W +L AC H + GE + LFKL
Sbjct: 516 FNVFKDVSENANLVSWNAILSACLQHK--QAGE--VFRLFKL 553
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 146/345 (42%), Gaps = 21/345 (6%)
Query: 6 LPPRLNRIYR--SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA 63
LP + Y+ S + WN+ I + + ++ + F QM + P+ +TF + A
Sbjct: 411 LPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCA 470
Query: 64 CAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVR-DVAS 108
C + IH +I+K + + KC L A+ +F +++ ++ S
Sbjct: 471 CGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVS 530
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
WNA+L Q V RLF M + D +T+ + L + VH F +
Sbjct: 531 WNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSV 590
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
G+ DVSV N I YAKC LK A VF + +VSW+S++ G ++
Sbjct: 591 KSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQN--PDIVSWSSLIVGYAQFGLGHEA 648
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLIS 287
LN +R M G + + T + +LS+ + +G ++ I G ++ ++
Sbjct: 649 LNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVD 708
Query: 288 MYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALR 331
+ ++ G + A + ++ W +++ G++D A R
Sbjct: 709 LLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAER 753
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 303/578 (52%), Gaps = 29/578 (5%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
F+ AK+ D S + +V+ ++ R + A ++FD++ RDV SWN+M+ G+
Sbjct: 170 FMVSEYAKIGDFKESICLFKIMVEKG-IEGKRPESASELFDKLCDRDVISWNSMISGYVS 228
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G E L ++ M +GI D T++ + ++ LSL K+VHS I + ++
Sbjct: 229 NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
NT + Y+KC DL A VF + ER VVSW SM+AG T D ++ + M
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGWSDGAIILLQQMEKE 346
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G +LDV + S+L + +L G+ VH + ++ V N L+ MY+KCG ++ A
Sbjct: 347 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGA 406
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQ 357
+F + + +SW M+ GEL PD T+ ++ C
Sbjct: 407 NSVFSTMVVKDIISWNTMV----------------------GELKPDSRTMACILPACAS 444
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE GK Y G + V NAL+D+Y KCG +G AR LF +P K +VSWT M
Sbjct: 445 LSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 504
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG ++G EA+ F+++ + + P+ V+F+++L AC+H+G LE+GW I +D
Sbjct: 505 IAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFN 564
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I P+L+HY+CM DLL R G L +A F++++PI DA IWG LLC C+I+ +IE+ E
Sbjct: 565 IE--PKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEK 622
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA +F+LEP + YV +AN YA + + V +R + + ++K PG S I G+
Sbjct: 623 VAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVN 682
Query: 598 TF-TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
F + + H S+ +L + +EE Y K+
Sbjct: 683 LFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKY 720
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 188/412 (45%), Gaps = 72/412 (17%)
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V +NA ++ F Q+G LEN + L + ++ T + Q K L+ K VHS
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKKVHS 123
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL------------------- 206
V D ++ +S YA C DLK VF +E++
Sbjct: 124 IIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 207 ------------------------------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
R V+SWNSM++G + L Y+ MM
Sbjct: 184 SICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
Y G +D+ T++S+L L G+ VHS I F+ ++ NTL+ MYSKCGD+D
Sbjct: 244 YLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A +F+ + +R VSWT+MI+GY + G D A+ L ME G D+V + S++ C
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACA 363
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+SG+L+ GK +Y + + N+ VCNAL+DMY+KCGS+ A +F + K ++SW T
Sbjct: 364 RSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNT 423
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
M+ +L+P+ T +L AC LE+G I
Sbjct: 424 MVG---------------------ELKPDSRTMACILPACASLSALERGKEI 454
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 204/449 (45%), Gaps = 41/449 (9%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I V+ + L +++QM I+ + T + CA L + +H
Sbjct: 218 SWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+KS F KC LD A ++F++M R+V SW +M+ G+ + G+ + +
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 337
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M G++ D V + + A + L K VH + + +++ VCN + Y
Sbjct: 338 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 397
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC ++ A VF + ++ ++SWN+MV + D T
Sbjct: 398 AKCGSMEGANSVFSTMV--VKDIISWNTMVG---------------------ELKPDSRT 434
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +L + AL +G+ +H + + G+ D V N L+ +Y KCG + AR+LFD I
Sbjct: 435 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ VSWT MI+GY G +EA+ F M AG PD V+ +S++ C SG LE G +
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+F ++ + ++D+ S+ G++ A + LP W ++ GC +
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 614
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ A + ++ EL+ P + +L
Sbjct: 615 HDIELAEKVAERVFELE--PENTGYYVLL 641
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 95/244 (38%), Gaps = 57/244 (23%)
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D + A I + Q GDL+ A+ L M EL + T S++ C +L GK
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELV-CMCQKSEL-ETKTYGSVLQLCAGLKSLTDGKK 120
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCG----------------------------SIGD 398
+ S + + + L+ Y+ CG IGD
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 399 -----------------------ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
A ELF L ++ V+SW +MI+G NG L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI---SIIQYDDKGISY-NPELDHYSCMA 491
Q+M L + + T ++VL C ++G L G A+ +I ++ I++ N LD YS
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300
Query: 492 DLLG 495
DL G
Sbjct: 301 DLDG 304
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/615 (32%), Positives = 318/615 (51%), Gaps = 27/615 (4%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC-------------AKLSDLIY-SQMIHG 78
N+ + LF QM++ EP+ +TF + C ++ L Y S++I G
Sbjct: 128 NQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVG 187
Query: 79 HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
+ + + K +RLD A ++F EM D S+NAM+ G+++ G E + LF M+ G++
Sbjct: 188 NTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
T + A I + L + +HSF I +V V N + Y+K D + A +
Sbjct: 248 PTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 307
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF---RLDVTTVVSLLSSFV 255
F + E+ VS+N +++G + K + + +R + + F + T++S+ S+ +
Sbjct: 308 FDEMPEQ--DGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTL 365
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
E GR +H+ I D ++ V N+L+ MY+KCG + A ++F + R+ V WTA
Sbjct: 366 DWE---MGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTA 422
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
MIS Y QKG +E L+LF M A + D T S++ +L LGK ++ G
Sbjct: 423 MISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSG 482
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
NV +AL+D+Y+KCGSI DA + F +P++ +VSW MI+ A NGE L F
Sbjct: 483 FMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFK 542
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLL 494
+++ L+P+ V+FL VL AC+H+G +E+G W + + K +P +HY+ + D+L
Sbjct: 543 EMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYK---LDPRREHYASVVDML 599
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP-HSAAPY 553
R G+ EA + MPI D +W ++L AC+IH N E+ A LF +E AAPY
Sbjct: 600 CRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPY 659
Query: 554 VEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTY 613
V M+N YA G+W+ V+ + M+ VKK P S I +T F+A DR H + E
Sbjct: 660 VNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIR 719
Query: 614 PVLDCLALHSREEAY 628
+D L E Y
Sbjct: 720 KKIDMLTKTMEELGY 734
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 217/462 (46%), Gaps = 15/462 (3%)
Query: 71 IYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++ +M H + V S +VK L A K+FD M R +W ++ G++Q+ +
Sbjct: 74 LFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEA 133
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LF M+ G + D+VT + L + + + V + I +G D+ + V NT + S
Sbjct: 134 FELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDS 193
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y K + L +A +F + E VS+N+M+ G + + ++N + M +G +
Sbjct: 194 YCKSNRLDLACQLFKEMPE--IDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEF 251
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T ++L + + + +V G+ +HS I F +V V N L+ YSK + AR LFD +
Sbjct: 252 TFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEM 311
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ VS+ +ISGYA G A LF ++ +M+S + E+G+
Sbjct: 312 PEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGR 371
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
++V N+L+DMY+KCG +A +F L + V WT MI+ G
Sbjct: 372 QIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKG 431
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPE 483
+ E L LF+++ + + ++ TF ++L+A L G + II+ +
Sbjct: 432 FYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS-----GFMSN 486
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ S + D+ + G +K+A+ Q MP ++ W ++ A
Sbjct: 487 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVS-WNAMISA 527
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL---- 326
+ GFD D S N + + K G++ AR LF+ + + VS MISGY + G+L
Sbjct: 44 VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEAR 103
Query: 327 ---------------------------DEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
EA LF M+ G PD VT ++++SGC
Sbjct: 104 KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---N 160
Query: 360 ALELGKWFDNYACSG---GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
E+G G ++V N L+D Y K + A +LF +PE VS+
Sbjct: 161 GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNA 220
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
MI G + +G +A++LF ++ L+P TF AVL C + G
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL 263
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/586 (34%), Positives = 302/586 (51%), Gaps = 24/586 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQN----DIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
WNS I + + LF M + + ++ T + KAC L + +H
Sbjct: 110 WNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVH 169
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+ VK F KC LD A FD++ +D+ +WN M+ G+AQ + E
Sbjct: 170 GYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEE 229
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LFY M L G + + T + +A+ ++ + H+ + +G DV V +
Sbjct: 230 EAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALV 289
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+K D++ E F E R +VS+N+++ G + K++++L Y + G D
Sbjct: 290 DMYSKFYDIEDVERAFG--EMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPD 347
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T V L SS + +G VH H + +G D DVSV N++++ YSKCG DSA F+
Sbjct: 348 SFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFE 407
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I V W +ISG+AQ G+ ++AL F M + D + S+I A+E
Sbjct: 408 SINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQ 467
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ + GL + V +A+IDMYSKCG + DA+++F +PEK VVSW +MI G A
Sbjct: 468 GRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQ 527
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG EAL LF ++ + P VTF+ +L AC+H G +E+G + + GI P
Sbjct: 528 NGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIP--PS 585
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA-YCL 542
++H +CM DLLGR G L+EA F+ S + GIWG+LL AC +H N ++G A +CL
Sbjct: 586 MEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCL 645
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
F LEPH ++ Y ++N YA W V+ IR +MK V+K PG S
Sbjct: 646 F-LEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCS 690
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 229/470 (48%), Gaps = 26/470 (5%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+ + +W S+I + + + L F QM + IEPN +T+ ACA+ + + +
Sbjct: 4 TNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSL 63
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H I+K F K DR+ A +FD+M RD SWN+M+ G++Q G
Sbjct: 64 HCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLN 123
Query: 123 ENVLRLFYNM-------RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
E LF +M +L + +DF T+ + +A + K VH + + IG D+D
Sbjct: 124 EEACGLFCSMINSCENWKL--LVSDF-TLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V + + Y KC L MA L F IE + +V+WN+M+ G ++++ + M
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIEN--KDIVAWNTMITGYAQNCYEEEAIELFYQM 238
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
GF+ + TT +L + GR H+ + G +DV V L+ MYSK DI
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ F + R VS+ A+I+GY+ G +EALR++ +++ G PD T + + S C
Sbjct: 299 EDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC 358
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
S + G ++ GL +V V N++++ YSKCG A E F ++ V W
Sbjct: 359 SVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWA 418
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+I+G A NGE +AL F ++ + + + + +V++A + +E+G
Sbjct: 419 GIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQG 468
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 182/377 (48%), Gaps = 12/377 (3%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M +V W + + A+ G ++ L F M GI+ + +T A + SL
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
S+H + G + V + IS Y+K D +K A +F + E R VSWNSM+AG +
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPE--RDDVSWNSMIAGYS 118
Query: 221 YGDKFDDSLNFYRHMMYN--GFRLDVT-----TVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+++ + M+ + ++L V+ TV+ C G+ VH + +
Sbjct: 119 QRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRI---GKCVHGYAVKI 175
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GFD D+ V + + MY KCG +D A + FD I ++ V+W MI+GYAQ +EA+ LF
Sbjct: 176 GFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELF 235
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ ME G P+ T ++ +G+ F G +V V AL+DMYSK
Sbjct: 236 YQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKF 295
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
I D F + ++ +VS+ +I G +L G++ EAL ++ QL + P+ TF+ +
Sbjct: 296 YDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLF 355
Query: 454 QACTHTGFLEKGWAISI 470
+C+ + + +G + +
Sbjct: 356 SSCSVSSTVAEGAQVHV 372
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 205/653 (31%), Positives = 336/653 (51%), Gaps = 30/653 (4%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
P L + I WN+ I + + K L LF QM ++++ + +T +ACA+L
Sbjct: 209 PLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAEL 268
Query: 68 SDLIYSQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAML 113
L + IH +K FV+ L+ ++++F+ + RD WN+M+
Sbjct: 269 GSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMI 328
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTV-MGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
+A G E + LF M+ G++ D TV + L+ A L KS+H+ I G+
Sbjct: 329 SAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGM 388
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV--VSWNSMVAGCTYGDKFDDSLN 230
D S+ N +S Y + + ++ + +F +R++ V +SWN+M+ +
Sbjct: 389 RIDASLGNALLSMYTELNCVESVQKIF----DRMKGVDIISWNTMILALARNTLRAQACE 444
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M + + + T++S+L++ L GR +H + + + +++ + L MY
Sbjct: 445 LFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYM 504
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
CGD +AR LF+G DR +SW AMI+ Y + +AL LF M + E P+ VT+++
Sbjct: 505 NCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAE-PNSVTIIN 563
Query: 351 MISGCGQSGALELGKWFDNYACSGG--LKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
++S L G+ Y G L ++ + NA I MY++CGS+ A +F LP+
Sbjct: 564 VLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPK 623
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ ++SW MIAG +NG +A+ F Q++E RPN VTF++VL AC+H+GF+E G +
Sbjct: 624 RNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQL 683
Query: 469 --SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
S++Q + PEL HYSC+ DLL R G + EA +F+ SMPI+ DA +W LL +C
Sbjct: 684 FHSMVQ----DFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSC 739
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+ + + + + + L KLEP +A YV ++N YA G W V IRT +K ++K PG
Sbjct: 740 RAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPG 799
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
S + + F+A DR H +S+ Y L L RE Y L+W+ E
Sbjct: 800 ISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVFHEE 852
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 236/468 (50%), Gaps = 27/468 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WNS I+ N L + QM+ + PNN T P + KACA + + + IH
Sbjct: 20 HWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSI 79
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G V + KC ++ A +FD M+ RDV WNAM+ G+ G E +
Sbjct: 80 QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAM 139
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISS 185
L M ++ + T++ L A A L L + VH + + G+ D++ V I
Sbjct: 140 LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGF 199
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y + D +++ L+F + +R +VSWN+M++G GD F +L + M+ + + D
Sbjct: 200 YLRFD-MRVLPLLFDLMV--VRNIVSWNAMISGYYDVGDYF-KALELFVQMLVDEVKFDC 255
Query: 245 TTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T+ L++ C E +L G+ +H I + F D+ ++N L++MYS G ++S+ LF
Sbjct: 256 VTM--LVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLF 313
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ--SGA 360
+ + +R W +MIS YA G +EA+ LF M++ G D TV+ M+S C + SG
Sbjct: 314 ESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGL 373
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ GK + G++ + + NAL+ MY++ + +++F + ++SW TMI
Sbjct: 374 LK-GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILA 432
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A N +A +LF ++ E +++PN T +++L AC L+ G +I
Sbjct: 433 LARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSI 480
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 4/358 (1%)
Query: 100 EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
++ ++D WN+++ A + + +L + M +G+ + T+ + +A +
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
KS+H + DV V + Y KC ++ A VF + + R VV WN+MV G
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSD--RDVVLWNAMVYGY 129
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLD 278
+++++ R M R + T+V+LL + L GR VH + + G FD +
Sbjct: 130 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSN 189
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V LI Y + D+ +LFD + R VSW AMISGY GD +AL LF M
Sbjct: 190 PHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLV 248
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
D VT+L + C + G+L+LGK A +++ + NAL++MYS GS+
Sbjct: 249 DEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLES 308
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+ +LF ++P + W +MI+ A G EA+DLF ++ ++ + T + +L C
Sbjct: 309 SHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 366
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/620 (32%), Positives = 325/620 (52%), Gaps = 30/620 (4%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
SL P R ++ WN IR++ N +TL ++ M + + NNLT+P + KAC
Sbjct: 2 SLRPSFRR-----SLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKAC 56
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
A L + + M+HGH++K F KC + A ++FDEM R V SWN
Sbjct: 57 ANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWN 116
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQ---ADFVTVM-GLTQAAIHAKHLSLLKSVHSF 166
AM+ +++ ++ L L M ++G + + FV+++ G + HL L KS+H
Sbjct: 117 AMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHL-LGKSIHCC 175
Query: 167 GIHIG-VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
I +G V +VS+ N+ + Y + + A VF ++E+ +++SW +M+ G
Sbjct: 176 LIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEK--SIISWTTMIGGYVKIGHA 233
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
++ + M + +D ++L+S + L+ VHS + G + V N L
Sbjct: 234 VEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLL 293
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
I+MY+KCG++ SAR +FD I +++ +SWT+MI+GY G EAL LF M P+
Sbjct: 294 ITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNG 353
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T+ +++S C G+L +G+ + Y GL+ + V +LI MYSKCGSI ARE+F
Sbjct: 354 ATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFER 413
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEK 464
+ +K + WT+MI A++G EA+ LFH++ + + P+ + + +V AC+H+G +E+
Sbjct: 414 VTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEE 473
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G D GI+ P ++H +C+ DLLGR G+L AL+ +Q MP A +WG LL
Sbjct: 474 GLKYFKSMQKDFGIT--PTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLS 531
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
AC+IH N+E+GE L P S+ YV MAN Y G+W +R M + K
Sbjct: 532 ACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKE 591
Query: 585 PGQSLFHINGKTCTFTAEDR 604
G S + TF ++
Sbjct: 592 SGWSQVEVTDTYHTFAVGNQ 611
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 321/628 (51%), Gaps = 19/628 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ T W + I + +L LF QM++ D+ P+ + AC+ L L +
Sbjct: 216 KVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGK 275
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG++++ F +KC ++ K+F+ + +DV SW M+ G Q
Sbjct: 276 QIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNS 335
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
F + + LF M G + D + + + L + VH++ I + +D D V N
Sbjct: 336 FHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKN 395
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I YAKCD L A VF + VVS+N+M+ G + DK ++L+ +R M +
Sbjct: 396 GLIDMYAKCDSLTNARKVFDLVAAI--NVVSYNAMIEGYSRQDKLVEALDLFREMRLSLS 453
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ T VSLL L +H I +G LD + LI +YSKC + AR+
Sbjct: 454 PPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARL 513
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ I DR V W AM SGY+Q+ + +E+L+L+ ++ + P+ T ++I+ +
Sbjct: 514 VFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIAS 573
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L G+ F N GL D+ V N+L+DMY+KCGSI ++ + F + ++ + W +MI+
Sbjct: 574 LRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMIST 633
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A +G+ +AL++F +++ ++PN VTF+ +L AC+H G L+ G+ GI
Sbjct: 634 YAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFH-HFESMSKFGI-- 690
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P +DHY+CM LLGR GK+ EA +FV+ MPIK A +W +LL AC++ ++E+G Y A
Sbjct: 691 EPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAE 750
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+P + Y+ ++N +A G W V +R M ++V K PG S +N + F
Sbjct: 751 MAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFI 810
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAY 628
A D H +S L VLD L L + Y
Sbjct: 811 ARDTAHRDSTLISLVLDNLILQIKGFGY 838
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 254/525 (48%), Gaps = 25/525 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLF-RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W+S + + + LLLF R M+ +PN + +AC +L +L + +HG +
Sbjct: 121 WSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFV 180
Query: 81 VKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK FV K +D A IFD + V+ +W A++ G+A++G E L
Sbjct: 181 VKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSL 240
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+LF MR + D + + A + L K +H + + G D DVSV N I Y
Sbjct: 241 KLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFY 300
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC +K +F + ++ VVSW +M+AGC D+++ + M+ G++ D
Sbjct: 301 LKCHKVKTGRKLFNRLVDK--DVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFG 358
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+L+S +AL +GR VH++ I D D V N LI MY+KC + +AR +FD +
Sbjct: 359 CTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVA 418
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
VS+ AMI GY+++ L EAL LF M + P L+T +S++ LEL
Sbjct: 419 AINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQ 478
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G+ + +ALID+YSKC +GDAR +F + ++ +V W M +G + E
Sbjct: 479 IHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLE 538
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
E+L L+ L L+PN TF AV+ A ++ L G Q+ ++ I + D
Sbjct: 539 NEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQ-----QFHNQVIKMGLDDDP 593
Query: 487 Y--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + + D+ + G ++E+ S + D W +++ H
Sbjct: 594 FVTNSLVDMYAKCGSIEESHKAFSSTN-QRDIACWNSMISTYAQH 637
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 194/389 (49%), Gaps = 19/389 (4%)
Query: 72 YSQMIHGHIVKSPFVKCDRL---------------DCAYKIFDEMAVRDVASWNAMLVGF 116
Y + IH HIV F + D A K+FD M R++ +W++M+ +
Sbjct: 69 YYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMY 128
Query: 117 AQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
Q G+ L LF MR + + + + +A +LS +H F + G D
Sbjct: 129 TQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQD 188
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V V + I YAK + A L+F G+ +++T V+W +++AG + + SL + M
Sbjct: 189 VYVGTSLIDFYAKRGYVDEARLIFDGL--KVKTTVTWTAIIAGYAKLGRSEVSLKLFNQM 246
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
D + S+LS+ E L G+ +H + + GFD+DVSV+N +I Y KC +
Sbjct: 247 REGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKV 306
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ R LF+ + D+ VSWT MI+G Q +A+ LF M G PD S+++ C
Sbjct: 307 KTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSC 366
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
G AL+ G+ YA + ++ V N LIDMY+KC S+ +AR++F + VVS+
Sbjct: 367 GSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYN 426
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRP 444
MI G + + VEALDLF + M L L P
Sbjct: 427 AMIEGYSRQDKLVEALDLFRE-MRLSLSP 454
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
Query: 266 VHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H+H + GF DV ++NTL+ YSK A+ LFD + R V+W++M+S Y Q G
Sbjct: 73 IHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHG 132
Query: 325 DLDEALRLFFA-MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
EAL LF M + E P+ + S++ C Q G L + GG +V V
Sbjct: 133 YSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVG 192
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+LID Y+K G + +AR +F L K V+WT +IAG A G +L LF+Q+ E D+
Sbjct: 193 TSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVY 252
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
P+R +VL AC+ FLE G I
Sbjct: 253 PDRYVISSVLSACSMLEFLEGGKQI 277
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 194/614 (31%), Positives = 310/614 (50%), Gaps = 18/614 (2%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + V + + +F +M ++PN F + AC DL + +H +
Sbjct: 169 SWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMV 228
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+++ + K + A +F ++ DV SWNA + G G ++ L
Sbjct: 229 IRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHAL 288
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M+ G+ + T+ + +A + +L + +H F + D+D + + Y
Sbjct: 289 ELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMY 348
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK L A+ VF I +R +V WN++++GC++G + ++L+ + M GF ++ TT
Sbjct: 349 AKHGLLDDAKKVFDWIPQR--DLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTT 406
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++L S EA+ R VH+ GF D V+N LI Y KC ++ A +F+
Sbjct: 407 LAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG 466
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+++T+MI+ +Q ++A++LF M G PD + S+++ C A E GK
Sbjct: 467 SYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ +V NAL+ Y+KCGSI DA F LPEK VVSW+ MI G A +G
Sbjct: 527 VHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGH 586
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
ALD+FH++++ + PN +T +VL AC H G +++ + GI E H
Sbjct: 587 GKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEE--H 644
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM DLLGR GKL +A++ V SMP +++A +WG LL A ++H + E+G A LF LE
Sbjct: 645 YACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILE 704
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + +V +AN YA G WD VA +R +MK ++VKK P S + K TF D+ H
Sbjct: 705 PEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSH 764
Query: 607 AESELTYPVLDCLA 620
+ Y LD L
Sbjct: 765 PRARDIYAKLDELG 778
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 197/412 (47%), Gaps = 21/412 (5%)
Query: 58 PFIAKACAKLSDLIYSQMIHGHIVKSP------------FVKCDRLDCAYKIFDEMAVRD 105
P + + A S L+ IH H++KS + KC A ++FDE+
Sbjct: 9 PLLTRYAATQS-LLQGAHIHAHLLKSGLFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPC 67
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
SW++++ ++ + L F +MR ++ + + + + A A +H+
Sbjct: 68 HVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDA---GFGTQLHA 124
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--CGIEERLRTVVSWNSMVAGCTYGD 223
+ G+ D+ V N ++ Y + A +VF G E R VSWN +++ D
Sbjct: 125 LAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCE---RNTVSWNGLMSAYVKND 181
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
+ ++ + M++ G + + ++++ L GR VH+ I G+D DV N
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN 241
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MYSK GDI A V+F + + VSW A ISG G AL L M+++G +P
Sbjct: 242 ALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
++ T+ S++ C SGA LG+ + + + L+DMY+K G + DA+++F
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVF 361
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+P++ +V W +I+GC+ + EAL LF ++ + NR T AVL++
Sbjct: 362 DWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 139/550 (25%), Positives = 224/550 (40%), Gaps = 47/550 (8%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA-------KLSDLIYS 73
W+S + N L FR M+ + N P + K CA +L L +
Sbjct: 70 SWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGFGTQLHALAMA 128
Query: 74 QMIHGHI-VKSPFVKC----DRLDCAYKIFDEMAV-RDVASWNAMLVGFAQMGFLENVLR 127
+ G I V + V +D A +FDE R+ SWN ++ + + + ++
Sbjct: 129 TGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVK 188
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M G+Q + + A ++ L + VH+ I G D DV N + Y+
Sbjct: 189 VFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYS 248
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D++MA +VF + E VVSWN+ ++GC +L M +G +V T+
Sbjct: 249 KLGDIRMAAVVFGKVPE--TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + A GR +H + D D + L+ MY+K G +D A+ +FD I
Sbjct: 307 SSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQ 366
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V W A+ISG + EAL LF M G + T+ +++ A+ +
Sbjct: 367 RDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQV 426
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A G + V N LID Y KC + A +F ++++T+MI +
Sbjct: 427 HALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHG 486
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI----------------- 470
+A+ LF +++ L P+ ++L AC E+G +
Sbjct: 487 EDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNAL 546
Query: 471 ---------IQYDDKGISYNPE--LDHYSCMADLLGRKGKLKEALDFVQSM---PIKSDA 516
I+ D S PE + +S M L + G K ALD M I +
Sbjct: 547 VYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNH 606
Query: 517 GIWGTLLCAC 526
++LCAC
Sbjct: 607 ITMTSVLCAC 616
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 159/350 (45%), Gaps = 14/350 (4%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N +S Y+KC A VF I + VSW+S+V + D+L +R M
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDEIPDPCH--VSWSSLVTAYSNNAMPRDALGAFRSMRSCS 98
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R + + +L C G +H+ + G D+ V N L++MY G +D AR
Sbjct: 99 VRCNEFVLPVVLK---CAPDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEAR 155
Query: 300 VLFDGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
++FD C+R VSW ++S Y + A+++F M G P+ +++ C S
Sbjct: 156 MVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGS 215
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
LE G+ G +V NAL+DMYSK G I A +F +PE VVSW I
Sbjct: 216 RDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFI 275
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+GC L+G AL+L Q+ L PN T ++L+AC +G G I +
Sbjct: 276 SGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM-----V 330
Query: 479 SYNPELDHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
N + D+Y + D+ + G L +A +P + D +W L+ C
Sbjct: 331 KANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISGC 379
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 10 LNRIYR------SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA 63
LN YR S I + S I + + LF +M + ++P+ + A
Sbjct: 455 LNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNA 514
Query: 64 CAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASW 109
CA LS + +H H++K F+ KC ++ A F + + V SW
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSW 574
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+AM+ G AQ G + L +F+ M I + +T+ + A HA
Sbjct: 575 SAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHA 619
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/607 (31%), Positives = 320/607 (52%), Gaps = 20/607 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V + + L LF+ M + + + T+ + ++CA LS +HGH +
Sbjct: 207 WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHAL 266
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KCDR+ A+K+F+ + S+NA++VG+A+ L
Sbjct: 267 KSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALE 326
Query: 128 LFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F +++ + D +++ G LT ++ HL ++ +H + G+ ++ V NT + Y
Sbjct: 327 IFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ-LHGLAVKCGLGFNICVANTILDMY 385
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC L A +F +E R VSWN+++A ++ +L+ + M+ + D T
Sbjct: 386 GKCGALVEACTIFDDMERR--DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFT 443
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S++ + +AL G +H + G LD V + L+ MY KCG + A + D +
Sbjct: 444 YGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE 503
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++T VSW ++ISG++ + + A R F M G +PD T +++ C +ELGK
Sbjct: 504 EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQ 563
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
L +V + + L+DMYSKCG++ D+R +F P++ V+W+ MI A +G
Sbjct: 564 IHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGH 623
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+A+ LF ++ L+++PN F++VL+AC H G+++KG I G+ +P ++H
Sbjct: 624 GEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGL--DPHMEH 681
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DLLGR ++ EAL ++SM ++D IW TLL CK+ N+E+ E L +L+
Sbjct: 682 YSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLD 741
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P ++ YV +AN YA G W VA IR++MK ++KK PG S + + TF D+ H
Sbjct: 742 PQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAH 801
Query: 607 AESELTY 613
SE Y
Sbjct: 802 PRSEEIY 808
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 236/524 (45%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WNS + ++ K++ +F +M+ I + TF + KAC+ + D +H
Sbjct: 106 WNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAI 165
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + + KC +LD A++IF EM R++ W+A++ G+ Q L+
Sbjct: 166 QMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLK 225
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M VG+ T + ++ L +H + D + + YA
Sbjct: 226 LFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYA 285
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KCD + A VF + R S+N+++ G D+ +L ++ + D ++
Sbjct: 286 KCDRMSDAWKVFNTLPNPPRQ--SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISL 343
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
L++ + ++G +H + G ++ V NT++ MY KCG + A +FD +
Sbjct: 344 SGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMER 403
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ + Q ++ + L LF +M + PD T S++ C AL G
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G+ + V +AL+DMY KCG + +A ++ L EK VSW ++I+G + +
Sbjct: 464 HGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQS 523
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
A F Q++E+ + P+ T+ VL C + +E G I + + N D Y
Sbjct: 524 ENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHA-----QILKLNLHSDVY 578
Query: 488 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G ++++ + P K D W ++CA H
Sbjct: 579 IASTLVDMYSKCGNMQDSRLMFEKTP-KRDYVTWSAMICAYAYH 621
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 224/507 (44%), Gaps = 49/507 (9%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A +FD M RDV SWN++L + G + +F MR + I D+ T + +A
Sbjct: 91 AQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSG 150
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ L VH I +G + DV + + Y+KC L A +F + E R +V W+
Sbjct: 151 IEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPE--RNLVCWS 208
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+++AG D+F + L ++ M+ G + +T S+ S A G +H H +
Sbjct: 209 AVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKS 268
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
F D + + MY+KC + A +F+ + + R S+ A+I GYA++ +AL +F
Sbjct: 269 DFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIF 328
Query: 334 FAMEAAGELPDLVTVLSMISGCGQ-SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
+++ D +++ ++ C G LE G A GL N+ V N ++DMY K
Sbjct: 329 QSLQRTYLSFDEISLSGALTACSVIKGHLE-GIQLHGLAVKCGLGFNICVANTILDMYGK 387
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
CG++ +A +F + + VSW +IA N E V+ L LF ++ + P+ T+ +V
Sbjct: 388 CGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSV 447
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALD----- 505
++AC L G I + + LD + S + D+ G+ G L EA
Sbjct: 448 VKACAGQQALNYGMEIH-----GRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRL 502
Query: 506 ---------------------------FVQ--SMPIKSDAGIWGTLLCACKIHLNIEIGE 536
F Q M + D + T+L C IE+G+
Sbjct: 503 EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGK 562
Query: 537 YVAYCLFKLEPHS----AAPYVEMANK 559
+ + KL HS A+ V+M +K
Sbjct: 563 QIHAQILKLNLHSDVYIASTLVDMYSK 589
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 159/356 (44%), Gaps = 16/356 (4%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
DV NT I YA+ ++ A+ +F + ER VVSWNS+++ + S+ +
Sbjct: 71 DVISWNTMIFGYAEIGNMGFAQSLFDTMPER--DVVSWNSLLSCYLHNGVNRKSIEIFVR 128
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M D T +L + E G VH I GF+ DV + L+ MYSKC
Sbjct: 129 MRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D A +F + +R V W+A+I+GY Q E L+LF M G T S+
Sbjct: 189 LDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C A +LG +A + ++ A +DMY+KC + DA ++F LP S+
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSY 308
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH-TGFLEKGWAISIIQY 473
+I G A + ++AL++F L L + ++ L AC+ G LE IQ
Sbjct: 309 NAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEG------IQL 362
Query: 474 DDKGISYNPELDHYSCMA----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
G++ L C+A D+ G+ G L EA M + DA W ++ A
Sbjct: 363 --HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAA 415
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 31/230 (13%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL G+ H+ I F + V N L+ Y K +++ A +FD + R +SW MI
Sbjct: 20 KALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMI 79
Query: 318 SGYAQKGDLDEALRLF------------------------------FAMEAAGELP-DLV 346
GYA+ G++ A LF F + ++P D
Sbjct: 80 FGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYA 139
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T ++ C LG A G +++V+ +AL+DMYSKC + A +F +
Sbjct: 140 TFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREM 199
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
PE+ +V W+ +IAG N F+E L LF ++++ + ++ T+ +V ++C
Sbjct: 200 PERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSC 249
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 11 NRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL 70
+R+ +T++ WNS I ++ ++ F QM + + P+N T+ + CA ++ +
Sbjct: 500 DRLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATI 558
Query: 71 IYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
+ IH I+K + KC + + +F++ RD +W+AM+ +
Sbjct: 559 ELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAY 618
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI---HIGVD 173
A G E ++LF M+L+ ++ + + + +A H ++ K +H F I H G+D
Sbjct: 619 AYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD--KGLHYFQIMQSHYGLD 676
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ + + + D + A + + V+ W ++++ C
Sbjct: 677 PHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVI-WRTLLSNC 721
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 199/621 (32%), Positives = 313/621 (50%), Gaps = 33/621 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR N + + + +M+ I +N TFPF+ KAC +L L+ Q +HG ++
Sbjct: 92 WNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLI 151
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F +K ++ A K+FDEM VRD+ SWN+M+ G+ G + L
Sbjct: 152 KIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLM 211
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M +G +AD ++ A L +H I ++ D+ V + I Y
Sbjct: 212 CFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYG 271
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + AE VF I + +V+WN+M+ G DK DV T+
Sbjct: 272 KCGKVDYAERVFNRIYSK--NIVAWNAMIGGMQEDDKVIP---------------DVITM 314
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL S AL++G+ +H I F + + L+ MY KCG++ A +F+ + +
Sbjct: 315 INLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNE 374
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW M++ Y Q EAL++F + PD +T+ S++ + + GK
Sbjct: 375 KNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQI 434
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+Y GL N + NA++ MY+KCG + ARE F + K VVSW TMI A++G
Sbjct: 435 HSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFG 494
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
++ F ++ +PN TF+++L AC+ +G +++GW + GI +P ++HY
Sbjct: 495 RTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGI--DPGIEHY 552
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
CM DLLGR G L EA F++ MP+ A IWG+LL A + H ++ + E A + L+
Sbjct: 553 GCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKH 612
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ YV ++N YA GRW+ V I+ +MK + K G S+ ING++ +F +DR HA
Sbjct: 613 DNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHA 672
Query: 608 ESELTYPVLDCLALHSREEAY 628
+ L Y VLD L E+ Y
Sbjct: 673 HTNLIYDVLDILLKKIGEDIY 693
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 228/475 (48%), Gaps = 25/475 (5%)
Query: 58 PFIAKACAKLSDLIYSQMIHGHIVKS--PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
PFI +A +K S ++ +I + FV+ + A +F++M D WN ++ G
Sbjct: 39 PFIKRAQSKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRG 98
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ G + + +Y M GI++D T + +A L + + VH I IG D D
Sbjct: 99 YTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLD 158
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V VCN I Y K +++AE VF E +R +VSWNSMV+G SL ++ M
Sbjct: 159 VYVCNFLIDMYLKIGFIELAEKVF--DEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEM 216
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G + D ++S L + L G +H I +LD+ V +LI MY KCG +
Sbjct: 217 LRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKV 276
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
D A +F+ I + V+W AMI G + + +PD++T+++++ C
Sbjct: 277 DYAERVFNRIYSKNIVAWNAMIGGMQEDDKV---------------IPDVITMINLLPSC 321
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
QSGAL GK +A +++ AL+DMY KCG + A +F + EK +VSW
Sbjct: 322 SQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWN 381
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
TM+A N ++ EAL +F ++ L+P+ +T +VL A +G I Y
Sbjct: 382 TMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIH--SYIM 439
Query: 476 K-GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
K G+ N + + + + + G L+ A +F M K D W T++ A IH
Sbjct: 440 KLGLGSNTFISN--AIVYMYAKCGDLQTAREFFDGMVCK-DVVSWNTMIMAYAIH 491
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 194/615 (31%), Positives = 317/615 (51%), Gaps = 49/615 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ V + + + LF +M + I+PN + + AC L D ++IHG+++
Sbjct: 226 WNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI 285
Query: 82 K-----SPF---------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K PF K L A +F+++ D+ SWNA++ G E L
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M+ + +HS + + +++D+ V + Y+
Sbjct: 346 LLGQMK---------------------------RQLHSSLMKMDMESDLFVSVGLVDMYS 378
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD--SLNFYRHMMYNGFRLDVT 245
KCD L+ A + F + E+ +++WN++++G Y ++D +L+ + M G + T
Sbjct: 379 KCDLLEDARMAFNLLPEK--DLIAWNAIISG--YSQYWEDMEALSLFVEMHKEGIGFNQT 434
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ ++L S + + R VH + GF D+ V+N+LI Y KC ++ A +F+
Sbjct: 435 TLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 494
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
VS+T+MI+ YAQ G +EAL+LF M+ PD S+++ C A E GK
Sbjct: 495 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGK 554
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ G ++ N+L++MY+KCGSI DA F L E+ +VSW+ MI G A +G
Sbjct: 555 QLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHG 614
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+AL LF+Q+++ + PN +T ++VL AC H G + + A + ++ + P +
Sbjct: 615 HGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTE--AKLYFESMEELFGFKPMQE 672
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLLGR GK+ EA++ V MP +++A +WG LL A +IH ++E+G A LF L
Sbjct: 673 HYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFIL 732
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP + +V +AN YA G+W+ VA +R +M+ ++VKK PG S + K TF DR
Sbjct: 733 EPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRS 792
Query: 606 HAESELTYPVLDCLA 620
H S+ Y LD L+
Sbjct: 793 HYRSQEIYAKLDELS 807
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 214/463 (46%), Gaps = 43/463 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I L+ F +M ++ N TF + KAC+ + DL + +HG +V
Sbjct: 125 WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVV 184
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F KCD + ++FDE+ R+V SWNA+ + Q F +
Sbjct: 185 VSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVG 244
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LFY M L GI+ + ++ + A + S K +H + I +G D D N + YA
Sbjct: 245 LFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA 304
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K DL A VF I++ +VSWN+++AGC + + +L M
Sbjct: 305 KVGDLADAISVFEKIKQ--PDIVSWNAVIAGCVLHEHHEQALELLGQMK----------- 351
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
R +HS + + D+ V L+ MYSKC ++ AR+ F+ + +
Sbjct: 352 ----------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE 395
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++W A+ISGY+Q + EAL LF M G + T+ +++ + + +
Sbjct: 396 KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 455
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G ++ V N+LID Y KC + DA +F +VS+T+MI A G+
Sbjct: 456 HGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQG 515
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
EAL LF ++ +++L+P+R ++L AC + E+G + +
Sbjct: 516 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 558
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 207/437 (47%), Gaps = 43/437 (9%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP-------- 84
+E +T + + + + P ++++ + C L IH HI KS
Sbjct: 35 SEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIR 94
Query: 85 ------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
+ KC A K+ DE + D+ SW+A++ G+AQ G L F+ M L+G++
Sbjct: 95 NHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ T + +A K L + K VH + G + DV V NT + YAKCD+ ++ +
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F I E R VVSWN++ + D +++ + M+ +G + + ++ S++++
Sbjct: 215 FDEIPE--RNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLR 272
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
+G+++H + I G+D D N L+ MY+K GD+ A +F+ I VSW A+I+
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIA 332
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
G ++AL L M+ +L + + M S
Sbjct: 333 GCVLHEHHEQALELLGQMKR--QLHSSLMKMDMES------------------------- 365
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ V L+DMYSKC + DAR F LPEK +++W +I+G + E +EAL LF ++
Sbjct: 366 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 425
Query: 439 ELDLRPNRVTFLAVLQA 455
+ + N+ T +L++
Sbjct: 426 KEGIGFNQTTLSTILKS 442
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 174/377 (46%), Gaps = 17/377 (4%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ G+ D S+ N I+ Y+KC A + E +VSW+++++G
Sbjct: 78 IHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLV--DESSEPDLVSWSALISGYAQN 135
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+L + M G + + T S+L + + L G+ VH + GF+ DV V
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NTL+ MY+KC + ++ LFD I +R VSW A+ S Y Q EA+ LF+ M +G
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ ++ SM++ C GK Y G + NAL+DMY+K G + DA +
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ--------LMELDLRPNRVTFLAVLQ 454
F + + +VSW +IAGC L+ +AL+L Q LM++D+ + + ++
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVD 375
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC----MADLLGRKGKLKEALDFVQ-- 508
+ LE + + I++N + YS M L KE + F Q
Sbjct: 376 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 435
Query: 509 -SMPIKSDAGIWGTLLC 524
S +KS AG+ +C
Sbjct: 436 LSTILKSTAGLQVVHVC 452
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 16/286 (5%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LLS ++L G +H+H G D S+ N LI++YSKC AR L D +
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPD 121
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
VSW+A+ISGYAQ G AL F M G + T S++ C L +GK
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV- 428
G + +V V N L+ MY+KC D++ LF +PE+ VVSW + + C + +F
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS-CYVQXDFCG 240
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACT-----HTGFLEKGWAISIIQYDDKGISYNPE 483
EA+ LF++++ ++PN + +++ ACT G + G+ I + YD S N
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK-LGYDWDPFSANAL 299
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+D Y+ + G L +A+ + + + D W ++ C +H
Sbjct: 300 VDMYA-------KVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH 337
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P V+ ++S C + +L G + GL D+ + N LI++YSKC G AR+L
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
E +VSW+ +I+G A NG AL FH++ L ++ N TF +VL+AC+
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 203/557 (36%), Positives = 295/557 (52%), Gaps = 26/557 (4%)
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYK--IFDEMAVRDVASWNAMLVGFAQMGFLENV 125
S L+Y + H H D A+ +F ++ +V SWN M +++ F
Sbjct: 64 SKLLYYSLSHDH------------DFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAET 111
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ L+ M G D + + +A L + +HS + +GV DV V N IS+
Sbjct: 112 IALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISA 171
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDV 244
++ C ++ A VF + +R VVSWNSM++G +++ +L + ++ +G D
Sbjct: 172 FSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDE 231
Query: 245 TTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T+VS LS VC L G+ +H GF LDV V ++LI MYSKCG I+ AR +F
Sbjct: 232 VTLVSALS--VCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVF 289
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D I R V WT+MI+GYAQ EA+ LF M+ G D T+ ++S CG GAL
Sbjct: 290 DRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALA 349
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+W Y ++ ++ NALI MYSKCG I A E+F+ L + + SW+ +I+G A
Sbjct: 350 QGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLA 409
Query: 423 LNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+NGE +AL LF Q+ M D+RPN +TFL VL AC H GF++KG + ++ YN
Sbjct: 410 MNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKG----LYYFNAMTQIYN 465
Query: 482 --PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P ++HY CM DLLGR L EA F++++PI+ D IW +LL AC+ H NIE+ E+ A
Sbjct: 466 LTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAA 525
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
+ +LEP V ++N YA RW V +R M ++KK PG S I+G
Sbjct: 526 KQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHEL 585
Query: 600 TAEDRYHAESELTYPVL 616
DR H E Y +
Sbjct: 586 FVADRSHPEMGAIYETM 602
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 212/442 (47%), Gaps = 22/442 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN R + +T+ L+ M +N P+N +FPF+ KACA+LS L + IH +
Sbjct: 95 WNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTL 154
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMA--VRDVASWNAMLVGFAQMGFLENV 125
K S F C ++ A +FD + VRDV SWN+M+ G+ Q E
Sbjct: 155 KLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELA 214
Query: 126 LRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L++F+ + G + D VT++ L L K +H G DV V ++ I
Sbjct: 215 LKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLID 274
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+KC ++ A VF I R V W SM+AG D F +++ +R M GF D
Sbjct: 275 MYSKCGQIEDARKVFDRIPH--RNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADA 332
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ +LS+ AL QGR +H + ++D++ N LI MYSKCGDI A +F G
Sbjct: 333 ATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHG 392
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALEL 363
+ SW+A+ISG A G+ D+AL LF ME ++ P+ +T L ++ C G ++
Sbjct: 393 LTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDK 452
Query: 364 GKWFDNYACS-GGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
G ++ N L + ++D+ + + +A + LP + VV W +++ C
Sbjct: 453 GLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFAC 512
Query: 422 ALNGEFVEALDLFHQLMELDLR 443
+G A Q+ EL+ R
Sbjct: 513 RNHGNIELAEFAAKQIEELEPR 534
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 209/657 (31%), Positives = 333/657 (50%), Gaps = 40/657 (6%)
Query: 8 PRLNRIYRSSTINQW--NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
P N + +S I + N Q EA+ L+ +M Q D+ P+ F I KACA
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIR---------LYLKMLQEDLVPDQFAFGSIIKACA 179
Query: 66 KLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
SD+ + +H ++K + +V+ +++ A ++F + ++D+ SW++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK-----SVHSF 166
++ GF+Q+GF L M G+ + G + A SLL+ +H
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS----SLLRPDYGSQIHGL 295
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I + + + YA+C L A VF IE SWN ++AG D
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP--DTASWNVIIAGLANNGYAD 353
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
++++ + M +GF D ++ SLL + P AL QG +HS+ I +GF D++V N+L+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 287 SMYSKCGDIDSARVLFDGICDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+MY+ C D+ LF+ + VSW +++ Q E LRLF M + PD
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T+ +++ GC + +L+LG Y+ GL + N LIDMY+KCGS+G AR +F +
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + VVSW+T+I G A +G EAL LF ++ + PN VTF+ VL AC+H G +E+G
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + GIS P +H SC+ DLL R G+L EA F+ M ++ D +W TLL A
Sbjct: 594 LKLYATMQTEHGIS--PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
CK N+ + + A + K++P ++ +V + + +A G W+ A +R+ MK++ VKK P
Sbjct: 652 CKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIP 711
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIP-EHEAG 641
GQS I K F AED +H E + Y VL + +E H K + HE G
Sbjct: 712 GQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECNPQHKKRLQFIHETG 768
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 217/460 (47%), Gaps = 13/460 (2%)
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S+ Y +++ HI+ S + KC L A ++FD M R++ S+ +++ G++Q G +R
Sbjct: 96 SNCKYDTILNNHIL-SMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ M + D + +A + + L K +H+ I + + + N I+ Y
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT-YGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ + + A VF GI ++ ++SW+S++AG + G +F+ + + + F +
Sbjct: 215 RFNQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN--TLISMYSKCGDIDSARVLFDG 304
S L + C L HG+ +L + I +L MY++CG ++SAR +FD
Sbjct: 273 FGSSLKA--CSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQ 330
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I SW +I+G A G DEA+ +F M ++G +PD +++ S++ + AL G
Sbjct: 331 IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG 390
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCAL 423
+Y G ++ VCN+L+ MY+ C + LF VSW T++ C
Sbjct: 391 MQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQ 450
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+ + VE L LF ++ + P+ +T +L+ C L+ G + G++ PE
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL-KTGLA--PE 507
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + D+ + G L +A SM + D W TL+
Sbjct: 508 QFIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 125/237 (52%), Gaps = 9/237 (3%)
Query: 230 NFYRHMMY--------NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
NFYR + + F++ + T +SL+ + +L QGR +H H ++ D +
Sbjct: 45 NFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTIL 104
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
N ++SMY KCG + AR +FD + +R VS+T++I+GY+Q G EA+RL+ M
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
+PD S+I C S + LGK +++ NALI MY + + DA
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQACT 457
+FY +P K ++SW+++IAG + G EAL +++ + PN F + L+AC+
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 170/393 (43%), Gaps = 16/393 (4%)
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + L A ++ L+ + +H ++ D + N +S Y KC L+ A VF +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
ER +VS+ S++ G + + +++ Y M+ D S++ + +
Sbjct: 129 PER--NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H+ I + N LI+MY + + A +F GI + +SW+++I+G++Q
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 323 KGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
G EAL M + G P+ S + C + G L N +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+L DMY++CG + AR +F + SW +IAG A NG EA+ +F Q+
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYD---DKGISYNPELDHYSCMADLLGR 496
P+ ++ ++L A T L +G I II++ D + N L Y+ +DL
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVC-NSLLTMYTFCSDLYC- 424
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + +D+ W T+L AC H
Sbjct: 425 ------CFNLFEDFRNNADSVSWNTILTACLQH 451
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 198/630 (31%), Positives = 317/630 (50%), Gaps = 49/630 (7%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+ WN+ I ++ + +F +M + + P+N TF + C L + +H
Sbjct: 139 NLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVH 198
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
++ F KCD + K+FDEM R+ +WN+++ AQ G
Sbjct: 199 SKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFN 258
Query: 124 NVLRLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ L LF M+ GIQ D T L + ++ + + +H+ I + ++ V
Sbjct: 259 DALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETE 318
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y++C L A+ +F + ER SWNSM+ G + ++L ++ M NG +
Sbjct: 319 LVHMYSECGRLNYAKEIFNRMAER--NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 376
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D ++ S+LSS V +GR +H+ + + + + L+ MY+KCG +D A +
Sbjct: 377 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKV 436
Query: 302 FDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+D DR W ++++GYA KG E+ F M + D++T+++++
Sbjct: 437 YDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV------- 489
Query: 360 ALELGKWFDNYACSGGLKDNVMVC-NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
N++V AL+DMYSKCG+I AR +F + K +VSW MI
Sbjct: 490 -------------------NLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMI 530
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+G + +G EAL L+ ++ + + PN VTFLA+L AC+HTG +E+G I +D I
Sbjct: 531 SGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNI 590
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
E HY+CM DLLGR G+L++A +FV+ MPI+ + WG LL AC++H ++++G
Sbjct: 591 EAKAE--HYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLA 648
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A LF+L+P + PYV M+N YA GRW V +IR MMK VKK PG S IN +
Sbjct: 649 AQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQI 708
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAY 628
F A + H ++E Y L L L S+ Y
Sbjct: 709 FHAGSKTHPKTEEIYNNLRHLTLQSKGLGY 738
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 209/439 (47%), Gaps = 23/439 (5%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A K+F+EM R++ +WN M++ +A++ +F M +G+ D T
Sbjct: 123 DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASAL 182
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
+ + K VHS I G D V N I YAKCDD + VF + E R
Sbjct: 183 RVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE--RN 240
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMM--YNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
V+WNS+++ F+D+L + M +G + D T +LL+ QGR +
Sbjct: 241 QVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 300
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H+H I ++ V L+ MYS+CG ++ A+ +F+ + +R SW +MI GY Q G+
Sbjct: 301 HAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGET 360
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
EALRLF M+ G PD ++ SM+S C + G+ N+ +++ ++ L
Sbjct: 361 QEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVL 420
Query: 387 IDMYSKCGSIGDARELFYAL--PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+DMY+KCGS+ A +++ ++ W +++AG A G E+ + F +++E D+
Sbjct: 421 VDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY 480
Query: 445 NRVTFL----------AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
+ +T + A++ + G + K + +S+N + YS
Sbjct: 481 DVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYS------ 534
Query: 495 GRKGKLKEALDFVQSMPIK 513
+ G KEAL + MP K
Sbjct: 535 -KHGCSKEALILYEEMPKK 552
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 5/225 (2%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS---ARVLFDGI 305
SL+ + + +G+ +H+ I G++ D ++ ++ +Y++ G +D AR LF+ +
Sbjct: 76 SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+R +W MI YA+ D EA +F M G PD T S + CG + + GK
Sbjct: 136 PERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 195
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ + G K + V NALIDMY+KC ++F + E+ V+W ++I+ A G
Sbjct: 196 QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFG 255
Query: 426 EFVEALDLFHQLMELD--LRPNRVTFLAVLQACTHTGFLEKGWAI 468
F +AL LF ++ E + ++P++ TF +L C + +G I
Sbjct: 256 HFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 300
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 318/621 (51%), Gaps = 18/621 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I V E+ + LF+ M ++ +P+++TF + + + Y + +HG +V
Sbjct: 79 WNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVV 138
Query: 82 KS-----PFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S P V K +L A K+FD M D+ WN M+ G+ Q GF+++
Sbjct: 139 RSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASM 198
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI+ D +T + + L +K +H + + GV DV + + I Y
Sbjct: 199 LFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYF 258
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D MA +F + + V+ + +M++G D+L +R ++ + T
Sbjct: 259 KCRDAVMACKMF-NLSTKFDIVI-YTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTF 316
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + A+ GR +H + I + V + +++MY+KCG +D A ++F I
Sbjct: 317 SSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISI 376
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ + W ++I+ ++Q G +EA+ LF M G D VTV + +S C AL GK
Sbjct: 377 KDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEI 436
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G + ++ +ALI+MY+KCG + AR +F + EK V+W ++IA +G
Sbjct: 437 HGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYL 496
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
++L LFH ++E ++P+ +TFL +L +C H G +E G ++ GI +++HY
Sbjct: 497 ADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIP--AQMEHY 554
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CMADL GR G L EA + + SMP A +WGTLL AC++H N+E+ E + L LEP
Sbjct: 555 ACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEP 614
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ Y+ + + A G+W V I+ +MK V+K PG S +N TC F A D H
Sbjct: 615 KNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHP 674
Query: 608 ESELTYPVLDCLALHSREEAY 628
ES Y +L L L R+ Y
Sbjct: 675 ESPQIYSLLKSLLLELRKVGY 695
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 229/492 (46%), Gaps = 20/492 (4%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHI----------VKSPFVK--CDR--LDCAYKI 97
P+ TFP + K C L+++ ++I I V S +K D ++ A +
Sbjct: 8 PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
FD+M +D WN M+ G+ Q G ++ ++LF +M + D VT + + +
Sbjct: 68 FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ +H + G+D V NT ++ Y+K L A +F + + +V WN M+
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQ--IDLVVWNRMIG 185
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G DD+ + M+ G + D T S L S +L Q + +H + + +G L
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV + + LI +Y KC D A +F+ V +TAMISGY G +AL +F +
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+P+ +T S++ C A++LG+ Y L++ V +A+++MY+KCG +
Sbjct: 306 QKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLD 365
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A +F + K + W ++I + +G+ EA+ LF Q+ ++ + VT A L AC
Sbjct: 366 LAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACA 425
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
+ L G I + KG ++ +L S + ++ + GKL A M K++
Sbjct: 426 NIPALHYGKEIH--GFMIKG-AFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVA 482
Query: 518 IWGTLLCACKIH 529
W +++ A H
Sbjct: 483 -WNSIIAAYGYH 493
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 165/331 (49%), Gaps = 4/331 (1%)
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G+ D T + + ++ L K + + +G D D+ V ++ I YA ++ A
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
F + ++ V WN M+ G + D ++ ++ MM + + D T +LS
Sbjct: 65 RRFFDKMIDK--DCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLS-IS 121
Query: 256 CPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
C EA+V+ GR +H + G D V NTL+++YSK + AR LFD + V W
Sbjct: 122 CSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWN 181
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
MI GY Q G +D+A LF M +AG PD +T S + +S +L+ K Y
Sbjct: 182 RMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRH 241
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G+ +V + +ALID+Y KC A ++F + +V +T MI+G LNG +AL++F
Sbjct: 242 GVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIF 301
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
L++ + PN +TF ++L AC ++ G
Sbjct: 302 RWLLQKKMIPNALTFSSILPACAGLAAIKLG 332
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 58/130 (44%)
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M G PD T +I C + LGK + G ++ V ++LI +Y+ G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
I DAR F + +K V W MI G GE A+ LF +M + +P+ VTF VL
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 456 CTHTGFLEKG 465
+E G
Sbjct: 121 SCSEAMVEYG 130
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 202/671 (30%), Positives = 321/671 (47%), Gaps = 98/671 (14%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+ ++ WN IR + N H L++ M N + +N T+P + +AC+
Sbjct: 33 RIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRR 92
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
++ +H H++K + F C + A ++F+E +V D SWN++L
Sbjct: 93 SEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILA 152
Query: 115 GFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
G+ ++G +E +++ M R + + + G+ + A L
Sbjct: 153 GYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKL--------------- 197
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNF 231
+E L + +V+W++++A + +++++
Sbjct: 198 -----------------------------FDEMLEKDMVTWSALIACFQQNEMYEEAIRT 228
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALV--QGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M G +D VS LS+ C LV G+L+HS + G + +++ N LI MY
Sbjct: 229 FVGMHKIGVMVDEVVAVSALSA--CANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMY 286
Query: 290 SKCGDI-------------------------------DSARVLFDGICDRTRVSWTAMIS 318
SKCGDI D+A+ +FD + ++ VSW++MIS
Sbjct: 287 SKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMIS 346
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GYAQ DE L LF M+ +G PD T++S+IS C + ALE GKW Y GL
Sbjct: 347 GYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTI 406
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
NV++ LIDMY KCG + A E+FY + EK + +W +I G A+NG +LD+F +
Sbjct: 407 NVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 466
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ + PN +TF+ VL AC H G +++G D I P + HY CM DLLGR G
Sbjct: 467 KCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKI--QPNVKHYGCMVDLLGRAG 524
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
KL+EA + + MP+ D WG LL ACK H + E+G V L +L+P +V ++N
Sbjct: 525 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 584
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDC 618
YA G+WD V IR MM +++V K PG S+ NG F A D+ H + + +L
Sbjct: 585 IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVE 644
Query: 619 LALHSREEAYS 629
+A+ + E Y+
Sbjct: 645 MAMKLKLEGYT 655
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 205/472 (43%), Gaps = 81/472 (17%)
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
PF+ +D +IF+ + + WN M+ + Q L+ +M + AD T
Sbjct: 24 PFI---HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYT 80
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
L QA + K VH+ + +G D+DV V NT I+ ++ C ++ A VF E
Sbjct: 81 YPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFN--E 138
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+ VSWNS++AG +++ + Y M PE
Sbjct: 139 SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM---------------------PER---- 173
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ N++I ++ G + A LFD + ++ V+W+A+I+ + Q
Sbjct: 174 --------------SIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQN 219
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+EA+R F M G + D V +S +S C + +GK + + G + + +
Sbjct: 220 EMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQ 279
Query: 384 NALIDMYSKCGSIGDAREL-------------------------------FYALPEKIVV 412
NALI MYSKCG I AR+L F ++PEK VV
Sbjct: 280 NALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVV 339
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISII 471
SW++MI+G A N F E L LF ++ +P+ T ++V+ AC LE+G W + I
Sbjct: 340 SWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYI 399
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + G++ N L + + D+ + G ++ AL+ M I+ W L+
Sbjct: 400 KRN--GLTINVILG--TTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 446
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 188/598 (31%), Positives = 317/598 (53%), Gaps = 20/598 (3%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL-----IYSQMIHGHIVKSPFV----- 86
+TL LF M+ ++E ++ + F KACA D I S + + K+ FV
Sbjct: 113 ETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMI 172
Query: 87 ----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
K ++ A ++FD M +DV WN+++ G+ Q G + +LF+ M GI+ +
Sbjct: 173 SFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPI 232
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ L QA +L L K +H + + +G+ D+ V +++ Y+K D++ A VF +
Sbjct: 233 TMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKM 292
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R +VSWN+M++GC +S + + ++ + D+TT+VSLL +L
Sbjct: 293 PTR--NLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLAT 350
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+++H I F+ ++ + ++ +YSKCG + A +F+ + DR ++WTAM+ G AQ
Sbjct: 351 GKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQ 409
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G ++ALRLF M+ G + VT +S++ C G+L+ G+ + G +++
Sbjct: 410 NGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVN 469
Query: 383 CNALIDMYSKCGSIGDARELF-YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
AL+DMY+KCG I A +F + K VV W +MI G ++G +A+ ++H+++E
Sbjct: 470 MTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEG 529
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
L+PN+ TFL++L AC+H+ +E+G IS+ ++ + P HY+C+ DLL R G+ +
Sbjct: 530 LKPNQTTFLSLLSACSHSRLVEQG--ISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFE 587
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
EA ++ MP + + LL C+ H NI +G + L L+ + Y+ ++N YA
Sbjct: 588 EAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYA 647
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
RWD V IR +M+ +KK PG SL TF A D H E Y L+ L
Sbjct: 648 EARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESL 705
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 171/350 (48%), Gaps = 6/350 (1%)
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+K+L +KS H+ I + D V + +Y+ L+ A VF + + N
Sbjct: 42 SKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLC--N 99
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+M+ G ++ ++L + M +D + L + G + S +
Sbjct: 100 AMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEK 159
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G + + V +++IS K G I A+ +FDG+ ++ V W ++I GY Q G D A +LF
Sbjct: 160 GMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLF 219
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
F M +G P +T+ S+I CG G L+LGK Y GL ++++V + +DMYSK
Sbjct: 220 FEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKM 279
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G I AR +FY +P + +VSW MI+GC NG E+ DLFH+L+ + T +++L
Sbjct: 280 GDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLL 339
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
Q C+ T L G I + S+ L + + DL + G LK+A
Sbjct: 340 QGCSQTASLATG----KILHGCAIRSFESNLILSTAIVDLYSKCGSLKQA 385
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 199/437 (45%), Gaps = 20/437 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
WNS I V LF +M + I+P+ +T + +AC + +L + +HG++
Sbjct: 199 WNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL 258
Query: 81 ---------VKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
V + FV K ++ A +F +M R++ SWNAM+ G + G +
Sbjct: 259 GLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFD 318
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ + D T++ L Q L+ K +H I ++++ + + Y+
Sbjct: 319 LFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYS 377
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC LK A VF +++ R V++W +M+ G +D+L + M G + T
Sbjct: 378 KCGSLKQATFVFNRMKD--RNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTF 435
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDGIC 306
VSL+ S +L +GR +H H GF D+ + L+ MY+KCG I+ A R+ G
Sbjct: 436 VSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSI 495
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ V W +MI+GY G +A+ ++ M G P+ T LS++S C S +E G
Sbjct: 496 SKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGIS 555
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
F++ ++ L+D+ S+ G +A+ L +P + +++GC +
Sbjct: 556 LFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTH 615
Query: 425 GEFVEALDLFHQLMELD 441
+ +L+ LD
Sbjct: 616 KNINLGIQTSDKLLALD 632
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 205/640 (32%), Positives = 338/640 (52%), Gaps = 44/640 (6%)
Query: 22 WNSQIR---EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
WN I A N +E + LF M + + P+ TFP + KAC + D IH
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 79 HIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K F+ + + A +FDEM VRD+ SWNAM+ G+ Q G +
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L L +R + D VTV+ L A A + ++HS+ I G+++++ V N I
Sbjct: 235 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 185 SYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YA+ L+ + VF +R+ R ++SWNS++ ++ +++ ++ M + +
Sbjct: 291 LYAEFGRLRDCQKVF----DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVL 301
D T++SL S + R V + G+ L D+++ N ++ MY+K G +DSAR +
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP-DLVTVLSMISGCGQSGA 360
F+ + + +SW +ISGYAQ G EA+ ++ ME GE+ + T +S++ C Q+GA
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L G GL +V V +L DMY KCG + DA LFY +P V W T+IA
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGIS 479
+G +A+ LF ++++ ++P+ +TF+ +L AC+H+G +++G W ++Q D GI+
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ-TDYGIT 585
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P L HY CM D+ GR G+L+ AL F++SM ++ DA IWG LL AC++H N+++G+ +
Sbjct: 586 --PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIAS 643
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF++EP +V ++N YA G+W+GV IR++ ++K PG S ++ K F
Sbjct: 644 EHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVF 703
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
++ H E Y L L +A + ++P+H
Sbjct: 704 YTGNQTHPMYEEMYRELTAL------QAKLKMIGYVPDHR 737
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 225/444 (50%), Gaps = 26/444 (5%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGIQADFVTVMGLTQAAI 152
A FD + RDV +WN M+ G+ + G V+R F L G+ D+ T + +A
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA-- 162
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+ + +H + G DV V + I Y++ + A ++F E +R + SW
Sbjct: 163 -CRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF--DEMPVRDMGSW 219
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFR-LDVTTVVSLLSSFVCPEA--LVQGRLVHSH 269
N+M++G ++L + NG R +D TVVSLLS+ C EA +G +HS+
Sbjct: 220 NAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSA--CTEAGDFNRGVTIHSY 272
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I +G + ++ V N LI +Y++ G + + +FD + R +SW ++I Y A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALID 388
+ LF M + PD +T++S+ S Q G + + + G +++ + NA++
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRV 447
MY+K G + AR +F LP V+SW T+I+G A NG EA+++++ + E ++ N+
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALD 505
T+++VL AC+ G L +G ++ + + LD + + +AD+ G+ G+L++AL
Sbjct: 453 TWVSVLPACSQAGALRQG-----MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 506 FVQSMPIKSDAGIWGTLLCACKIH 529
+P + ++ W TL+ H
Sbjct: 508 LFYQIP-RVNSVPWNTLIACHGFH 530
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 138/288 (47%), Gaps = 18/288 (6%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
DV T+ ++ + L RLV S I +V + L+++Y G++ AR F
Sbjct: 56 DVHTLFRYCTNLQSAKCL-HARLVVSKQIQ-----NVCISAKLVNLYCYLGNVALARHTF 109
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGAL 361
D I +R +W MISGY + G+ E +R F M ++G PD T S++ C +
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 166
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G A G +V V +LI +YS+ ++G+AR LF +P + + SW MI+G
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+G EAL L + L +D VT +++L ACT G +G ++I Y K
Sbjct: 227 CQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRG--VTIHSYSIKH-GLE 279
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
EL + + DL G+L++ M ++ D W +++ A +++
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELN 326
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 342/641 (53%), Gaps = 45/641 (7%)
Query: 22 WNSQIR---EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
WN I A +E + LF M + ++P+ TFP + KAC ++D IH
Sbjct: 120 WNLMISGYGRAGYSSEVIRCFSLF--MLSSGLQPDYRTFPSVLKACRNVTD---GNKIHC 174
Query: 79 HIVKSPFV-------KCDRLDCAYK-------IFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K F+ L C Y +FDEM RD+ SWNAM+ G+ Q G +
Sbjct: 175 LALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKE 234
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L L +R + D VTV+ L A A + ++HS+ I G+++++ V N I
Sbjct: 235 ALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 185 SYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YA+ LK + VF +R+ R ++SWNS++ ++ ++ ++ M + +
Sbjct: 291 LYAEFGSLKDCQKVF----DRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQP 346
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVL 301
D T++SL S + R V + G+ L D+++ N ++ MY+K G +DSAR +
Sbjct: 347 DCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-AGELP-DLVTVLSMISGCGQSG 359
F+ + ++ +SW +ISGYAQ G EA+ ++ ME GE+ + T +S++ C Q+G
Sbjct: 407 FNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAG 466
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL G GL +V V +L DMY KCG + DA LFY +P V W T+IA
Sbjct: 467 ALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIA 526
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGI 478
+G +A+ LF ++++ ++P+ +TF+ +L AC+H+G +++G W ++Q D GI
Sbjct: 527 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQ-TDYGI 585
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
+ P L HY CM DL GR G+L+ AL+F++SMP++ DA IWG LL AC++H N+++G+
Sbjct: 586 T--PSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIA 643
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
+ LF++EP +V ++N YA G+W+GV IR++ ++K PG S ++ K
Sbjct: 644 SEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEV 703
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
F ++ H E Y L ALH + + + ++P+H
Sbjct: 704 FYTGNQTHPMYEEMYRELT--ALHEKLKM----VGYVPDHR 738
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 227/445 (51%), Gaps = 27/445 (6%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGIQADFVTVMGLTQAAI 152
A FD + RDV +WN M+ G+ + G+ V+R F L G+Q D+ T + +A
Sbjct: 105 ARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKA-- 162
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
++++ +H + G DV V + I Y + + A ++F E R + SW
Sbjct: 163 -CRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILF--DEMPTRDMGSW 219
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFR-LDVTTVVSLLSSFVCPEA--LVQGRLVHSH 269
N+M++G ++L + +G R +D TVVSLLS+ C EA +G +HS+
Sbjct: 220 NAMISGYCQSGNAKEALT-----LSDGLRAMDSVTVVSLLSA--CTEAGDFNRGVTIHSY 272
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I +G + ++ V N LI +Y++ G + + +FD + R +SW ++I Y A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALID 388
+ LF M + PD +T++S+ S Q G + + + G +++ + NA++
Sbjct: 333 ILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNR 446
MY+K G + AR +F LP K V+SW T+I+G A NG EA+++++ + E ++ N+
Sbjct: 393 MYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQ 452
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEAL 504
T+++VL AC+ G L +G ++ + + LD + + +AD+ G+ G+L +AL
Sbjct: 453 GTWVSVLPACSQAGALRQG-----MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDAL 507
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
+P + ++ W TL+ H
Sbjct: 508 SLFYQIP-RVNSVPWNTLIACHGFH 531
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 135/288 (46%), Gaps = 18/288 (6%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
DV T+ ++ + L RLV S+ I +V + L+++Y G++ AR F
Sbjct: 56 DVHTLFRYCTNLQSAKCL-HARLVVSNAIQ-----NVCISAKLVNLYCYLGNVALARYTF 109
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGAL 361
D I +R +W MISGY + G E +R F M ++G PD T S++ C +
Sbjct: 110 DHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---V 166
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G A G +V V +LI +Y + G++ +AR LF +P + + SW MI+G
Sbjct: 167 TDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGY 226
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+G EAL L L +D VT +++L ACT G +G ++I Y K
Sbjct: 227 CQSGNAKEALTLSDGLRAMD----SVTVVSLLSACTEAGDFNRG--VTIHSYSIKH-GLE 279
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
EL + + DL G LK+ M ++ D W +++ A +++
Sbjct: 280 SELFVSNKLIDLYAEFGSLKDCQKVFDRMYVR-DLISWNSIIKAYELN 326
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 222/669 (33%), Positives = 336/669 (50%), Gaps = 89/669 (13%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S++ WN IR A++ N + L LFR+MK P++ TFPF+ KAC ++S+ I
Sbjct: 89 SSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASI 148
Query: 77 HGHIVK--------------SPFVKCDRLDCAYKIFDEMAVR---DVASWNAMLVGFAQM 119
HG +++ S + KC + A K+FDE+ R D +WN+++ ++
Sbjct: 149 HGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHC 208
Query: 120 GFLENV-LRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
F+ NV + LF M + GI D V V+ + + + VH F + G+ DV
Sbjct: 209 -FVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVF 267
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLR--TVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V N + YAKC ++ A VF ER+R VV+WN+MV G + +F+D+L+ + M
Sbjct: 268 VGNALVDMYAKCGKMEDANKVF----ERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKM 323
Query: 236 -------------------MYNGF----------------RLDVTTVVSLLSSFVCPEAL 260
GF R +V T++SLLS+ AL
Sbjct: 324 REEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGAL 383
Query: 261 VQGRLVHSH-------GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC--DRTRV 311
+ G+ H + G H D++VIN LI MY+KC ++ AR +FD IC DR V
Sbjct: 384 LHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVV 443
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALELGKWFDN 369
+WT MI GYAQ GD + AL+LF M +P+ T+ ++ C + AL+ GK
Sbjct: 444 TWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHA 503
Query: 370 YACSGGLKDN--VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y D+ + V N LIDMYSK G + A+ +F ++ ++ VSWT+++ G ++G
Sbjct: 504 YVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRS 563
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+A +F ++ + L + +TFL VL AC+H+G D G+ +P ++HY
Sbjct: 564 EDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGV--DPGVEHY 608
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DLLGR G+L EA+ + MPI+ +W LL AC+IH N E+ E+ A L +L+
Sbjct: 609 ACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKA 668
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ Y ++N YA RW VA I +MKR +KK PG S TF DR H
Sbjct: 669 DNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHL 728
Query: 608 ESELTYPVL 616
+S+ Y L
Sbjct: 729 QSQKIYETL 737
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 212/635 (33%), Positives = 325/635 (51%), Gaps = 33/635 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I V + + F Q+ + + TFP + KAC L D + IH +
Sbjct: 142 WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWV 198
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K F + + A +FD+M RD+ SWNAM+ G Q G L
Sbjct: 199 FKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 258
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ MRL GI D VTV + +S +H + I G++ ++ V N I+ Y
Sbjct: 259 DVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMY 318
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK +L A+ VF + LR VVSWNS++A D + F+ M NG D+ T
Sbjct: 319 AKFGNLGDAQKVFQ--QMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT 376
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI-NTLISMYSKCGDIDSARVLFDGI 305
+VSL S R VH + G+ ++ VI N ++ MY+K G IDSA +F+ I
Sbjct: 377 LVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLI 436
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP-DLVTVLSMISGCGQSGALELG 364
+ VSW +ISGY Q G EA+ ++ ME E+ + T +S+++ GAL+ G
Sbjct: 437 PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQG 496
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ L +V V LID+Y KCG + DA LFY +P + V W +I+ ++
Sbjct: 497 MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIH 556
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPE 483
G +AL LF ++ + ++P+ VTF+++L AC+H+G +++G W ++Q + GI P
Sbjct: 557 GHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ--EYGI--KPS 612
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
L HY CM DLLGR G L+ A DF++ MP+ DA IWG LL AC+IH NIE+G++ + LF
Sbjct: 613 LKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLF 672
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+++ + YV ++N YA G+W+GV +R++ + +KK PG S +N + F +
Sbjct: 673 EVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGN 732
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
+ H + + Y L L A L +IP++
Sbjct: 733 QSHPKCKEIYAELRILT------AKMKSLGYIPDY 761
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 226/439 (51%), Gaps = 20/439 (4%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKH 156
FD++ +DV +WN+M+ + + G + FY + LV QADF T + +A +
Sbjct: 131 FDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKA---CQT 187
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + +H + +G DV V + I Y++ + +A +F + R + SWN+M+
Sbjct: 188 LVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP--FRDMGSWNAMI 245
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYG 274
+G +L+ M G +D TV S+L VC + + L+H + I +G
Sbjct: 246 SGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILP--VCAQLGDISTATLIHLYVIKHG 303
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ ++ V N LI+MY+K G++ A+ +F + R VSW ++I+ Y Q D A FF
Sbjct: 304 LEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFF 363
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKC 393
M+ G PDL+T++S+ S QS + + + G L + V++ NA++DMY+K
Sbjct: 364 KMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKL 423
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME-LDLRPNRVTFLAV 452
G I A ++F +P K VVSW T+I+G NG EA++++ + E +++ N+ T++++
Sbjct: 424 GVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSI 483
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSM 510
L A H G L++G I I N LD + +C+ DL G+ G+L +A+ +
Sbjct: 484 LAAYAHVGALQQGMRIH-----GHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQV 538
Query: 511 PIKSDAGIWGTLLCACKIH 529
P +S W ++ IH
Sbjct: 539 PRESSVP-WNAIISCHGIH 556
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 213/440 (48%), Gaps = 19/440 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WN+ I + A + L + +M+ I +++T I CA+L D+ + +IH
Sbjct: 238 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHL 297
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+++K + + K L A K+F +M +RDV SWN+++ + Q
Sbjct: 298 YVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVT 357
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 183
F+ M+L G++ D +T++ L A ++ +SVH F + G + V + N +
Sbjct: 358 ARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVM 417
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRL 242
YAK + A VF I ++ VVSWN++++G T +++ YR M +L
Sbjct: 418 DMYAKLGVIDSAHKVFNLIP--VKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKL 475
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T VS+L+++ AL QG +H H I LDV V LI +Y KCG + A LF
Sbjct: 476 NQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLF 535
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ + V W A+IS + G ++AL+LF M+ G PD VT +S++S C SG ++
Sbjct: 536 YQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVD 595
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
GKWF + G+K ++ ++D+ + G + A + +P S W ++ C
Sbjct: 596 EGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGAC 655
Query: 422 ALNGEFVEALDLFHQLMELD 441
++G +L E+D
Sbjct: 656 RIHGNIELGKFASDRLFEVD 675
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 169/353 (47%), Gaps = 31/353 (8%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN-FYRHMMYNGFR 241
++ YA D+ ++ F I+ + V +WNSM++ F ++++ FY+ ++ F+
Sbjct: 115 VNLYASLGDVSLSRGTFDQIQRK--DVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQ 172
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T +L + C + LV GR +H GF DV V +LI MYS+ G + AR L
Sbjct: 173 ADFYTFPPVLKA--C-QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSL 229
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + R SW AMISG Q G+ +AL + M G D VTV S++ C Q G +
Sbjct: 230 FDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDI 289
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
Y GL+ + V NALI+MY+K G++GDA+++F + + VVSW ++IA
Sbjct: 290 STATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAY 349
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT----------GF-LEKGWAISI 470
N + V A F ++ L P+ +T +++ + GF + +GW +
Sbjct: 350 EQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEA 409
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + + D+ + G + A +P+K D W TL+
Sbjct: 410 VVIGN-------------AVMDMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLI 448
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 201/665 (30%), Positives = 328/665 (49%), Gaps = 61/665 (9%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
NRI ++ WN+ I + LF M + I+PN T I CA L +
Sbjct: 139 FNRIEFKDVVS-WNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEE 197
Query: 70 ---LIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
Y + +H H+++ S +++ +++ A +F M RD+ SWNA
Sbjct: 198 NAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNA 257
Query: 112 MLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-H 169
++ G+A G L LF + L I+ D VT++ + A H +L + K +H + I H
Sbjct: 258 IIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRH 317
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G+ D SV N +S YAKC+ + A F I + ++SWN+++ T +
Sbjct: 318 PGLREDTSVGNALLSFYAKCNYTQAALQTFLMISR--KDLISWNAILDAFTESGCETHLV 375
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLI 286
N M+ G R D T+++++ + + + + HS+ I +G D ++ N ++
Sbjct: 376 NLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGML 435
Query: 287 SMYSKCGDI--------------------------------DSARVLFDGICDRTRVSWT 314
Y+KCG++ D A +F+ + + +W
Sbjct: 436 DAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWN 495
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
M+ YA+ D+AL LF ++ G PD+VT++S++ C ++ + + Y
Sbjct: 496 LMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA 555
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
D V + A IDMYSKCGS+ A +LF + P+K +V +T M+ G A++G EAL +F
Sbjct: 556 CFND-VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIF 614
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++EL ++P+ V AVL AC+H G +++GW I +K + P ++ Y+C+ DLL
Sbjct: 615 SYMLELGVKPDHVIITAVLFACSHAGLVDEGW--KIFNSIEKVHGFQPTMEQYACVVDLL 672
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
R G++K+A FV MPI+++A IWGTLL AC+ H +E+G VA LFK+E + YV
Sbjct: 673 ARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYV 732
Query: 555 EMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYP 614
M+N YA RWDGV IR +M+ ++KK G S + + F A D H + + Y
Sbjct: 733 VMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYR 792
Query: 615 VLDCL 619
L L
Sbjct: 793 TLSTL 797
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 215/480 (44%), Gaps = 62/480 (12%)
Query: 37 KTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP----------- 84
+ + LFR M N+ +PN++T + CA+L + + +H +++KS
Sbjct: 63 EVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLREDA-GKSVHSYVIKSGLESHTLAGNAL 121
Query: 85 ---FVKCDRLDC--AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
+ KC L C AY F+ + +DV SWNA++ GF++ F E +LF+ M IQ
Sbjct: 122 ISMYAKCG-LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQP 180
Query: 140 DFVTVMGLTQAAIHAKH---LSLLKSVHSFGIH-IGVDADVSVCNTWISSYAKCDDLKMA 195
++ T+ + + K VH + + + DVSV N+ +S Y + ++ A
Sbjct: 181 NYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKA 240
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSF 254
E +F ++ R +VSWN+++AG ++ +L + + + D T+VS+L +
Sbjct: 241 EFLFRNMKSR--DLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPAC 298
Query: 255 VCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
L + +H + I H G D SV N L+S Y+KC +A F I + +SW
Sbjct: 299 AHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISW 358
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC------------------ 355
A++ + + G + L M G PD +T+L++I
Sbjct: 359 NAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIR 418
Query: 356 -----GQSGALELGKWFDNYACSGGLK------------DNVMVCNALIDMYSKCGSIGD 398
G +G D YA G +K NV+ CN++I Y S D
Sbjct: 419 FGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDD 478
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F + E + +W M+ A N +AL LFH+L ++P+ VT +++L AC H
Sbjct: 479 AYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAH 538
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 181/378 (47%), Gaps = 10/378 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE-NVLRLFYNMRLVGIQADFVT 143
+ K LD K+F EM RD WN +L G A E V+RLF M +V
Sbjct: 23 YAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSV 82
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDL-KMAELVFCGI 202
+ + KSVHS+ I G+++ N IS YAKC + A F I
Sbjct: 83 TIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRI 142
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL---SSFVCPEA 259
E + VVSWN+++AG + +++ + M+ + + T+ S+L +S
Sbjct: 143 E--FKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAG 200
Query: 260 LVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
G+ VH H + DVSVIN+L+S Y + G ++ A LF + R VSW A+I+
Sbjct: 201 YRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIA 260
Query: 319 GYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACS-GGL 376
GYA G+ +AL LF + + PD VT++S++ C L++ K Y GL
Sbjct: 261 GYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGL 320
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+++ V NAL+ Y+KC A + F + K ++SW ++ +G ++L H
Sbjct: 321 REDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHW 380
Query: 437 LMELDLRPNRVTFLAVLQ 454
++ +RP+ +T L ++Q
Sbjct: 381 MLREGIRPDSITILTIIQ 398
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 7/186 (3%)
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ-KGDLDEALRL 332
G+D S+ L+++Y+K G +D LF + R V W ++SG A + E +RL
Sbjct: 11 GYD---SLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRL 67
Query: 333 FFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
F AM E P+ VT+ ++ C + + GK +Y GL+ + + NALI MY+
Sbjct: 68 FRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYA 126
Query: 392 KCGSI-GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KCG + DA F + K VVSW +IAG + N EA LFH +++ ++PN T
Sbjct: 127 KCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIA 186
Query: 451 AVLQAC 456
++L C
Sbjct: 187 SILPVC 192
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 193/631 (30%), Positives = 322/631 (51%), Gaps = 50/631 (7%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
NS IR + + +LL+ +M + PN+ TFPF+ C K++ +HG +VK
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 83 SP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ +C +D +K+F+ M+ R+V SW +++ G+A+ + + L
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F+ M GI+ VT++ + A + L + + V ++ +G+ + + N + Y K
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C + A+ +F E R +V +N++++ ++L M+ G R D T++
Sbjct: 280 CGAIDAAKRLF--DECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTML 337
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG--------------- 293
S +S+ L G++ H + I G + S+ N +I MY KCG
Sbjct: 338 SAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNK 397
Query: 294 ----------------DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D++SA +F+ I +R V W MISG QK ++A+ LF M+
Sbjct: 398 TVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQ 457
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G D VT++ + S CG GA EL KW Y G+ ++ + AL+DM+++CG
Sbjct: 458 GEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQ 517
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A ++F + E+ V +WT I A+ G A LF+Q++ ++P+ V F+ VL AC+
Sbjct: 518 SAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACS 577
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
H G +E+G I + +D GIS P+++HY CM DLLGR G L+EA D ++SMP++ +
Sbjct: 578 HGGQVEQGLHIFSLM-EDHGIS--PQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDV 634
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK 577
+WG+LL AC++H N+E+ Y A + +L P A +V ++N YA G+W VA +R ++
Sbjct: 635 VWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLR 694
Query: 578 RNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
V+K PG S +NG FT+ D H E
Sbjct: 695 EKGVRKVPGSSSVQVNGVIHEFTSGDESHPE 725
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 243/544 (44%), Gaps = 71/544 (13%)
Query: 24 SQIREA--VNK----NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+QI+EA + K NE+ + Q+KQ + I KL +
Sbjct: 14 TQIKEADPMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNA------- 66
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVAS------WNAMLVGFAQMGFLENVLRLFYN 131
G + SP + LD A K F E+ DV S N+++ G++ G + L+
Sbjct: 67 GAEIASP----ESLDYARKAF-ELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVR 121
Query: 132 MRLVGIQADFVT----VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
M ++G+ + T + G T+ A + + VH + +G++ DV + N I YA
Sbjct: 122 MLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQ----VHGSVVKMGLEEDVFIQNCLIHFYA 177
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C + VF G+ ER VVSW S++ G GD+ ++++ + M+ G R T+
Sbjct: 178 ECGHMDHGHKVFEGMSER--NVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTM 235
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V ++S+ L G V ++ G L+ ++N L+ MY KCG ID+A+ LFD D
Sbjct: 236 VCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVD 295
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V + ++S YA++G EAL + M G PD VT+LS IS Q L GK
Sbjct: 296 RNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVC 355
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGS-------------------------------I 396
Y GL+ + N +IDMY KCG +
Sbjct: 356 HGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDV 415
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
A E+F +PE+ V W TMI+G F +A++LF ++ ++ +RVT + + AC
Sbjct: 416 ESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASAC 475
Query: 457 THTGFLE-KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
+ G E W + I+ + GI + L+ + + D+ R G + A+ M + D
Sbjct: 476 GYLGAPELAKWVHTYIEKN--GIPCDMRLN--TALVDMFARCGDPQSAMQVFNKM-TERD 530
Query: 516 AGIW 519
W
Sbjct: 531 VSAW 534
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 194/444 (43%), Gaps = 44/444 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
W S I + + + LF +M + I P+++T + ACAKL DL + + +I
Sbjct: 200 WTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG 259
Query: 81 -------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ ++KC +D A ++FDE R++ +N +L +A+ G L
Sbjct: 260 ELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALA 319
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M G + D VT++ A+ L K H + I G++ S+ N I Y
Sbjct: 320 ILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYM 379
Query: 188 KCDDLKMAELVFCGIEERL-----------------------------RTVVSWNSMVAG 218
KC +MA VF + + R V WN+M++G
Sbjct: 380 KCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISG 439
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
F+D++ +R M G + D T++ + S+ A + VH++ G D
Sbjct: 440 LVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCD 499
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ + L+ M+++CGD SA +F+ + +R +WTA I A +G+ + A LF M
Sbjct: 500 MRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLI 559
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G PD+V + +++ C G +E G + G+ + ++D+ + G + +
Sbjct: 560 QGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLRE 619
Query: 399 ARELFYALP-EKIVVSWTTMIAGC 421
A +L ++P E V W +++A C
Sbjct: 620 AFDLIKSMPMEPNDVVWGSLLAAC 643
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 211/619 (34%), Positives = 311/619 (50%), Gaps = 54/619 (8%)
Query: 54 NLTFPFIA--KACAKLSDL--IYSQMIHGHIVKSPFVKCD-----------RLDCAYKIF 98
L PF++ + C +S L I SQM+ +++ F LD I
Sbjct: 4 QLINPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNIL 63
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHL 157
+ SWN + GF + L+ ++ G + D T L +A +
Sbjct: 64 FNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLI 123
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ + +H+G D+D+ V N I C DL A +F + +R +VSWNSM+
Sbjct: 124 RMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMF--DKSCVRDLVSWNSMIN 181
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G ++LNFYR M G + D T++ ++SS E L GR H + G L
Sbjct: 182 GYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKL 241
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD---------- 327
V + N L+ MY KCG+++SAR LFD + ++T VSWT M+ GYAQ G LD
Sbjct: 242 TVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMP 301
Query: 328 ---------------------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
EAL LF M+A PD VT++S +S C Q GAL++G W
Sbjct: 302 DKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIW 361
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+Y L NV + ALIDMY+KCG I A ++F LP + ++WT +I+G AL+G
Sbjct: 362 IHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGN 421
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
A+ F ++++ + P+ VTFL +L AC H G +E+G Q K + +P+L H
Sbjct: 422 AHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKY-FSQMSSK-FNLSPKLKH 479
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DLLGR G L+EA + ++SMPI++DA +WG L AC+IH N+ +GE A L +++
Sbjct: 480 YSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMD 539
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
PH + YV +AN Y W R +M++ V+K PG S +NG F D+ H
Sbjct: 540 PHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSH 599
Query: 607 AESELTYPVLDCLALHSRE 625
+SE Y +CL +R+
Sbjct: 600 PQSEQIY---ECLIQLTRQ 615
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 221/473 (46%), Gaps = 46/473 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYS 73
R+ WN IR ++ + ++L++++ Q D +P+N T+P + KACA+LS +
Sbjct: 67 RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 126
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
I GH++ F V C LD A K+FD+ VRD+ SWN+M+ G+ +
Sbjct: 127 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 186
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G+ L + M++ GI+ D VT++G+ + + L L + H + G+ V +
Sbjct: 187 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 246
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERL-----------------------------RTVV 210
N + Y KC +L+ A +F + + + VV
Sbjct: 247 NALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVV 306
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
WN+M+ G + ++ ++L + M D T+VS LS+ AL G +H +
Sbjct: 307 PWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYI 366
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ L+V++ LI MY+KCG I A +F + R ++WTA+ISG A G+ A+
Sbjct: 367 EKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAI 426
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDM 389
F M +PD VT L ++S C G +E G K+F + L + + ++D+
Sbjct: 427 AYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDL 486
Query: 390 YSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ G + +A EL ++P E V W + C ++G + +L+++D
Sbjct: 487 LGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMD 539
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 201/665 (30%), Positives = 328/665 (49%), Gaps = 61/665 (9%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
NRI ++ WN+ I + LF M + I+PN T I CA L +
Sbjct: 200 FNRIEFKDVVS-WNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEE 258
Query: 70 ---LIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
Y + +H H+++ S +++ +++ A +F M RD+ SWNA
Sbjct: 259 NAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNA 318
Query: 112 MLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-H 169
++ G+A G L LF + L I+ D VT++ + A H +L + K +H + I H
Sbjct: 319 IIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRH 378
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G+ D SV N +S YAKC+ + A F I + ++SWN+++ T +
Sbjct: 379 PGLREDTSVGNALLSFYAKCNYTQAALQTFLMISR--KDLISWNAILDAFTESGCETHLV 436
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLI 286
N M+ G R D T+++++ + + + + HS+ I +G D ++ N ++
Sbjct: 437 NLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGML 496
Query: 287 SMYSKCGDI--------------------------------DSARVLFDGICDRTRVSWT 314
Y+KCG++ D A +F+ + + +W
Sbjct: 497 DAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWN 556
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
M+ YA+ D+AL LF ++ G PD+VT++S++ C ++ + + Y
Sbjct: 557 LMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA 616
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
D V + A IDMYSKCGS+ A +LF + P+K +V +T M+ G A++G EAL +F
Sbjct: 617 CFND-VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIF 675
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++EL ++P+ V AVL AC+H G +++GW I +K + P ++ Y+C+ DLL
Sbjct: 676 SYMLELGVKPDHVIITAVLFACSHAGLVDEGW--KIFNSIEKVHGFQPTMEQYACVVDLL 733
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
R G++K+A FV MPI+++A IWGTLL AC+ H +E+G VA LFK+E + YV
Sbjct: 734 ARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYV 793
Query: 555 EMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYP 614
M+N YA RWDGV IR +M+ ++KK G S + + F A D H + + Y
Sbjct: 794 VMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYR 853
Query: 615 VLDCL 619
L L
Sbjct: 854 TLSTL 858
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 203/439 (46%), Gaps = 24/439 (5%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRL------ 91
+L L R +PN + K+C +S + + ++HG+ +K V C L
Sbjct: 23 SLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLN 82
Query: 92 --------DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE-NVLRLFYNMRLVGIQADFV 142
D K+F EM RD WN +L G A E V+RLF M +V
Sbjct: 83 LYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNS 142
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDL-KMAELVFCG 201
+ + KSVHS+ I G+++ N IS YAKC + A F
Sbjct: 143 VTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNR 202
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL---SSFVCPE 258
IE + VVSWN+++AG + +++ + M+ + + T+ S+L +S
Sbjct: 203 IE--FKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENA 260
Query: 259 ALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
G+ VH H + DVSVIN+L+S Y + G ++ A LF + R VSW A+I
Sbjct: 261 GYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAII 320
Query: 318 SGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACS-GG 375
+GYA G+ +AL LF + + PD VT++S++ C L++ K Y G
Sbjct: 321 AGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPG 380
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
L+++ V NAL+ Y+KC A + F + K ++SW ++ +G ++L H
Sbjct: 381 LREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLH 440
Query: 436 QLMELDLRPNRVTFLAVLQ 454
++ +RP+ +T L ++Q
Sbjct: 441 WMLREGIRPDSITILTIIQ 459
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 215/480 (44%), Gaps = 62/480 (12%)
Query: 37 KTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP----------- 84
+ + LFR M N+ +PN++T + CA+L + + +H +++KS
Sbjct: 124 EVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNAL 182
Query: 85 ---FVKCDRLDC--AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
+ KC L C AY F+ + +DV SWNA++ GF++ F E +LF+ M IQ
Sbjct: 183 ISMYAKCG-LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQP 241
Query: 140 DFVTVMGLTQAAIHAKH---LSLLKSVHSFGIH-IGVDADVSVCNTWISSYAKCDDLKMA 195
++ T+ + + K VH + + + DVSV N+ +S Y + ++ A
Sbjct: 242 NYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKA 301
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSF 254
E +F ++ R +VSWN+++AG ++ +L + + + D T+VS+L +
Sbjct: 302 EFLFRNMKSR--DLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPAC 359
Query: 255 VCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
L + +H + I H G D SV N L+S Y+KC +A F I + +SW
Sbjct: 360 AHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISW 419
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC------------------ 355
A++ + + G + L M G PD +T+L++I
Sbjct: 420 NAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIR 479
Query: 356 -----GQSGALELGKWFDNYACSGGLK------------DNVMVCNALIDMYSKCGSIGD 398
G +G D YA G +K NV+ CN++I Y S D
Sbjct: 480 FGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDD 539
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F + E + +W M+ A N +AL LFH+L ++P+ VT +++L AC H
Sbjct: 540 AYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAH 599
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 170/338 (50%), Gaps = 13/338 (3%)
Query: 135 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
VG + + + L ++ + + +H + + +G + S+C ++ YAK L
Sbjct: 33 VGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDY 92
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCT-YGDKFDDSLNFYRHM-MYNGFRLDVTTVVSLLS 252
+F +++ R V WN +++G + + + +R M M N + + T+ +L
Sbjct: 93 CNKLFGEMDQ--RDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLP 150
Query: 253 SFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS-ARVLFDGICDRTR 310
VC G+ VHS+ I G + N LISMY+KCG + S A F+ I +
Sbjct: 151 --VCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDV 208
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG---QSGALELGKWF 367
VSW A+I+G+++ +EA +LF AM P+ T+ S++ C ++ GK
Sbjct: 209 VSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEV 268
Query: 368 DNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ L ++V V N+L+ Y + G + A LF + + +VSW +IAG A NGE
Sbjct: 269 HCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGE 328
Query: 427 FVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLE 463
+++AL+LF + + L+ ++P+ VT ++VL AC H L+
Sbjct: 329 WLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQ 366
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 327 DEALRLFFAME--AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
DEAL LF + G P+ + +++ C A+ G YA G +C
Sbjct: 19 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCK 78
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA-LNGEFVEALDLFHQL-MELDL 442
L+++Y+K G++ +LF + ++ V W +++G A E + LF + M +
Sbjct: 79 GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA 138
Query: 443 RPNRVTFLAVLQACT 457
+PN VT VL C
Sbjct: 139 KPNSVTIAIVLPVCA 153
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 312/600 (52%), Gaps = 32/600 (5%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
PR+N I W+ IR V+ A K L L+ +M + + P T+PF+ KACA L
Sbjct: 64 PRINPI-------AWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGL 116
Query: 68 SDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAML 113
+ ++IH H+ S F KC LD A K+FDEM RD+ +WNAM+
Sbjct: 117 RAIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMI 176
Query: 114 VGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
GF+ L +V+ LF +MR + + T++G+ A A L K+VH + +G
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D+ V + YAK + A VF + + V+W++M+ G + ++ +
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVF--DSDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
M+ N VT V L C L GR VH + I GF LD++V NT+IS Y+
Sbjct: 295 LQMLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYA 354
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
K G + A F I + VS+ ++ISG + +E+ RLF M+++G PD+ T+L
Sbjct: 355 KYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLG 414
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
+++ C AL G Y G N +CNAL+DMY+KCG + A+ +F + ++
Sbjct: 415 ILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRD 474
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-- 468
+VSW TM+ G ++G EAL LF+ + + + P+ VT LA+L AC+H+G +++G +
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFN 534
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
S+ + D I P LDHY+CM DLL R G L EA DFV MP + D + GTLL AC
Sbjct: 535 SMSRGDFNVI---PRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWT 591
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+ N+E+G V+ + L + V ++N Y+ RW+ A IR K++ + K PG S
Sbjct: 592 YKNVELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYS 650
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 232/496 (46%), Gaps = 32/496 (6%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEM 101
F + ++C + +LI Q+IH H++K + C+ ++ A +FDE+
Sbjct: 2 FLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 102 AVRDV--ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
+ +W+ M+ + GF E L L+Y M G++ T + +A + +
Sbjct: 62 PHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIED 121
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
K +HS AD+ VC + YAKC +L MA VF E R +V+WN+M++G
Sbjct: 122 GKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVF--DEMPKRDIVAWNAMISGF 179
Query: 220 TYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ D + + M + +++T+V + + AL +G+ VH + GF D
Sbjct: 180 SLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ V ++ +Y+K I AR +FD + V+W+AMI GY + + EA +F M
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLV 299
Query: 339 AGELPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
++ + V + ++ GC + G L G+ YA G ++ V N +I Y+K GS+
Sbjct: 300 NADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSL 359
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA F + K +VS+ ++I+GC N E+ LFHQ+ +RP+ T L +L AC
Sbjct: 360 CDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTAC 419
Query: 457 THTGFLEKGWAI---SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
++ L G + ++ G + N + + + D+ + GKL A +M K
Sbjct: 420 SNLAALGHGSSCHGYCVVN----GYAVNTSI--CNALMDMYTKCGKLYVAKRVFDTMH-K 472
Query: 514 SDAGIWGTLLCACKIH 529
D W T+L IH
Sbjct: 473 RDIVSWNTMLFGFGIH 488
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 328/637 (51%), Gaps = 37/637 (5%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + R S+I+ WN+ I ++ ++ + LF +M D+ +++ + C + +
Sbjct: 72 FNSMPRRSSIS-WNAMISGCLSNDKFYLARQLFEKMPTRDL----VSWNVMISGCVRYRN 126
Query: 70 L-----IYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
L ++ QM +V S + + + A +IFDEM ++ SWN ML + Q
Sbjct: 127 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQN 186
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G +E+ RLF + +AD+ + + K L+ + F + D
Sbjct: 187 GRIEDARRLFES------KADWELISWNCMMGGYVKRNRLVDARGIFDRM--PERDEVSW 238
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT IS YA+ +L A+ +F E +R V +W +MV+G D++ + M
Sbjct: 239 NTMISGYAQNGELLEAQRLF--EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK- 295
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ + ++++ +V + + Q R L + +VS NT+I+ Y++ GDI A
Sbjct: 296 ---NSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQA 347
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R FD + R +SW A+I+GYAQ G +EAL LF M+ GE + T S +S C +
Sbjct: 348 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 407
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
ALELGK GL+ V NAL+ MY KCG+I DA +F + EK VVSW TMI
Sbjct: 408 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 467
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
AG A +G EAL LF + + + P+ VT + VL AC+HTG ++KG D GI
Sbjct: 468 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGI 527
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
+ N + HY+CM DLLGR G+L +A + +++MP + DA WG LL A +IH N E+GE
Sbjct: 528 TANSK--HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 585
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A +F++EP ++ YV ++N YA GRW V +R M+ VKK PG S + K T
Sbjct: 586 AKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHT 645
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
FT D H E + Y L+ L L ++E Y S K +
Sbjct: 646 FTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLV 682
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 189/420 (45%), Gaps = 41/420 (9%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWN 110
+P+ P + A +D++ +I + ++ + D A ++F+ M R SWN
Sbjct: 30 KPSTRNQPKTTSSLATDADIV-----KWNIAITNHMRNGQCDSALRLFNSMPRRSSISWN 84
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
AM+ G +LF M D V+ + + ++L + +
Sbjct: 85 AMISGCLSNDKFYLARQLFEKM----PTRDLVSWNVMISGCVRYRNLRAARLL----FDQ 136
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
+ DV N +S YA+ +K A+ +F E + +SWN M+A + +D+
Sbjct: 137 MPERDVVSWNAMLSGYAQNGYVKEAKEIF--DEMPCKNSISWNGMLAAYVQNGRIEDA-- 192
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD----LDVSVINTLI 286
R + + ++ + ++ +V + RLV + GI FD D NT+I
Sbjct: 193 --RRLFESKADWELISWNCMMGGYV-----KRNRLVDARGI---FDRMPERDEVSWNTMI 242
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
S Y++ G++ A+ LF+ R +WTAM+SGY Q G LDEA R+F M + V
Sbjct: 243 SGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPE----KNSV 298
Query: 347 TVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+ ++I+G Q ++ + F+ C NV N +I Y++ G I AR F
Sbjct: 299 SWNAIIAGYVQCKRMDQARELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQARNFFDR 353
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+P++ +SW +IAG A +G EAL LF ++ R NR TF + L C LE G
Sbjct: 354 MPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 413
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 28/252 (11%)
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D D+ N I+ + + G DSA LF+ + R+ +SW AMISG A +LF
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEK 105
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M DLV+ MISGC + L + FD + +V+ NA++ Y++ G
Sbjct: 106 MPTR----DLVSWNVMISGCVRYRNLRAARLLFDQMP-----ERDVVSWNAMLSGYAQNG 156
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ +A+E+F +P K +SW M+A NG +A LF + +L +
Sbjct: 157 YVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWEL---------ISW 207
Query: 455 ACTHTGFLEKGWAISIIQYDDKGI-SYNPELDH--YSCMADLLGRKGKLKEALDFVQSMP 511
C G++++ + D +GI PE D ++ M + G+L EA + P
Sbjct: 208 NCMMGGYVKRNRLV-----DARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESP 262
Query: 512 IKSDAGIWGTLL 523
++ D W ++
Sbjct: 263 VR-DVFTWTAMV 273
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+++ N I + + G A LF ++P + +SW MI+GC N +F A LF ++
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
DL V++ ++ C L + + +S+N L Y+ + G
Sbjct: 108 TRDL----VSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYA-------QNG 156
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCA 525
+KEA + MP K+ W +L A
Sbjct: 157 YVKEAKEIFDEMPCKNSIS-WNGMLAA 182
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 212/686 (30%), Positives = 338/686 (49%), Gaps = 81/686 (11%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L R+ S + WN +RE + + + + + +M + +P++ T P+ KAC +L
Sbjct: 106 LERVTPSPAV-WWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPS 164
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEM---AVRDVASWNAM 112
+ +HG I + F +C L+ A +FDE+ + DV SWN++
Sbjct: 165 YCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSI 224
Query: 113 LVGFAQMGFLENVLRLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+ + L LF M ++ ++D ++++ + A K L +K +HS+
Sbjct: 225 VAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSY 284
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT----YG 222
I G AD VCN I +YAKC + A VF +E + VVSWN+MV G T +G
Sbjct: 285 AIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVME--FKDVVSWNAMVTGYTQSGNFG 342
Query: 223 DKFD-------------------------------DSLNFYRHMMYNGFRLDVTTVVSLL 251
F+ ++L+ ++ M+ +G + T++SLL
Sbjct: 343 AAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLL 402
Query: 252 SSFVCPEALVQGRLVHSHGIHYGF------------DLDVSVINTLISMYSKCGDIDSAR 299
S+ AL QG +H++ + D+ V N LI MYSKC +AR
Sbjct: 403 SACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAAR 462
Query: 300 VLFDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGC 355
+FD I R R V+WT MI GYAQ GD ++AL++F M + P+ T+ ++ C
Sbjct: 463 SIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMAC 522
Query: 356 GQSGALELGKWFDNYACSGGLKDNVM--VCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
AL +GK Y + + V N LIDMYSKCG + AR +F ++P++ VS
Sbjct: 523 AHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVS 582
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
WT+M++G ++G EALD+F ++ + P+ ++FL +L AC+H+G +++G I
Sbjct: 583 WTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMR 642
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
D + + E HY+C+ DLL R G+L +A +Q MP++ A IW LL AC++H N+E
Sbjct: 643 RDYDVVASAE--HYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVE 700
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+ EY L ++ + Y ++N YA RW VA IR +MK++ +KK PG S
Sbjct: 701 LAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGK 760
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCL 619
T +F DR H S Y +L+ L
Sbjct: 761 KGTASFFVGDRSHPLSPEIYSLLERL 786
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++SY C K A V ER+ V WN +V D ++ M+ G
Sbjct: 90 VASYLACGATKDALSVL----ERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGT 145
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D T+ L + + GR +H GF+ +V V N L++MYS+CG ++ A +
Sbjct: 146 KPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASL 205
Query: 301 LFDGICDR---TRVSWTAMISGYAQKGDLDEALRLFFAM------EAAGELPDLVTVLSM 351
+FD I + +SW ++++ + + + AL LF M +A E D+++++++
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNI 265
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C AL K +YA G + VCNALID Y+KCGS+ DA ++F + K V
Sbjct: 266 LPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325
Query: 412 VSWTTMIAGCALNGEF-----------------------------------VEALDLFHQ 436
VSW M+ G +G F EALD F Q
Sbjct: 326 VSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQ 385
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
++ PN VT +++L AC G L +G I
Sbjct: 386 MILDGSEPNSVTIISLLSACASLGALSQGMEI 417
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 17/250 (6%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+++ Y CG A + + + V W ++ + ++G LD A+ + M AG PD
Sbjct: 89 VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ + CG+ + G+ C G + NV VCNAL+ MYS+CGS+ DA +F
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFD 208
Query: 405 ALPEK---IVVSWTTMIAGCALNGEFVEALDLFHQLMEL------DLRPNRVTFLAVLQA 455
+ K V+SW +++A AL+LF ++ + + R + ++ + +L A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPA 268
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIK 513
C L + I + I D + C A D + G + +A+ M K
Sbjct: 269 CASLKALPQ-----IKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFK 323
Query: 514 SDAGIWGTLL 523
D W ++
Sbjct: 324 -DVVSWNAMV 332
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/599 (32%), Positives = 310/599 (51%), Gaps = 66/599 (11%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + K +L+ A+++FD + VRD SW ++VG+ QMG E+ +++F +M +
Sbjct: 49 SGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQF 108
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + + + K VHSF + +G+ A V V N+ ++ YAK DLKMA++VF +
Sbjct: 109 TLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRM 168
Query: 203 EER-----------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ R R +VSWNSM+AGC +++L F+
Sbjct: 169 KLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFS 228
Query: 234 HMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
++ + + D ++ S LS+ E L G+ +H + + FD +V N LISMY+K
Sbjct: 229 SILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKS 288
Query: 293 G---------------------------------DIDSARVLFDGICDRTRVSWTAMISG 319
G DI AR +F+ + D V+WTAMI G
Sbjct: 289 GGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVG 348
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y Q G ++A+ +F M + G P+ T+ +M+S +L GK A G +
Sbjct: 349 YVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALS 408
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
V NAL MY+K GSI AR++F L + + VSWT+MI A +G EA++LF Q++
Sbjct: 409 PSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQML 468
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
L ++P+ +T++ VL ACTH G +E+G + + + I +P L HY+CM DL GR G
Sbjct: 469 TLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKI--DPTLSHYACMVDLFGRAG 526
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
L+EA FV++MP++ D WG+LL +CK++ N+++ + A L +EP+++ Y +AN
Sbjct: 527 LLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALAN 586
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
Y+ G+WD A IR +MK VKK G S I KT F ED H + + Y ++D
Sbjct: 587 VYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMD 645
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 181/417 (43%), Gaps = 74/417 (17%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT +S YAK L+ A VF I +R VSW +++ G +F+D++ + M+ +
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIP--VRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDK 102
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
T+ ++L+S + G+ VHS + G V V N+L++MY+K GD+ A+
Sbjct: 103 VLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAK 162
Query: 300 VLFDG-------------------------------ICDRTRVSWTAMISGYAQKGDLDE 328
V+FD + +R VSW +MI+G Q G +E
Sbjct: 163 VVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNE 222
Query: 329 ALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGK---------WFDN--------- 369
AL+ F ++ L PD ++ S +S C L GK FD
Sbjct: 223 ALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALI 282
Query: 370 --YACSGGLKD-------------NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
YA SGG++ +V+ AL++ Y K G I AR++F +L + VV+W
Sbjct: 283 SMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAW 342
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQ 472
T MI G NG +A+++F ++ RPN T A+L A + L G I S I+
Sbjct: 343 TAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIR 402
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G + +P + + + + + G + A + D W +++ A H
Sbjct: 403 ---SGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQH 454
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL +V + N L+++Y+K G DA +LF +P K SW T+++G A G+ +A
Sbjct: 5 GLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA---- 60
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
HQ+ +L + V++ ++ G E I + DK + L +
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G +G K+ FV + + + + +LL
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLL 149
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 315/623 (50%), Gaps = 23/623 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDI-EPNNLTFPFIAKACAKLSDLIYSQM 75
S + WNS + + H TL +F+++ I P++ T+P + KA L +M
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH +VKS + K + + + ++FDEM RDVASWN ++ F Q G
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E L LF M + + V++ A L K +H + + D V +
Sbjct: 188 AEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSA 247
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y +CD L+MA VF + R +++V+WNSM+ G + M+ G R
Sbjct: 248 LVDMYGRCDFLEMAREVF--QQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTR 305
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
TT+ S+L + L+ G+ VH + I D D+ + +LI +Y KCG++ A +
Sbjct: 306 PSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETV 365
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F SW MISGY G+ +A+ ++ M + G PD+VT S++S C Q AL
Sbjct: 366 FLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAAL 425
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E GK L+ + ++ +AL+DMYSKCG++ +A +F ++P+K VVSWT MI+
Sbjct: 426 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAY 485
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+G+ EAL F ++ + ++P+ VTFLAVL AC H G +++G GI
Sbjct: 486 GSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGI--E 543
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
++ YSC+ D+LGR G+L EA +Q P + +A + TL CAC +H + +G +A
Sbjct: 544 ASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAK 603
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L + P A+ Y + N YA G WD +R MK ++K PG S +N K C F
Sbjct: 604 LLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFF 663
Query: 601 AEDRYHAESELTYPVLDCLALHS 623
AEDR H ++E Y +CLAL S
Sbjct: 664 AEDRSHPQAENVY---ECLALLS 683
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 232/491 (47%), Gaps = 32/491 (6%)
Query: 60 IAKACAKLSDLIYSQMIHGHIV----KSPFVKCDRL---------DCAYK-IFDEMAVR- 104
+ + C L ++++H I+ +S V C L C+ + +F+ + +R
Sbjct: 9 LLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRS 68
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI-QADFVTVMGLTQAAIHAKHLSLLKSV 163
DV WN+++ G+++ + L++F + I D T + +A L + +
Sbjct: 69 DVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMI 128
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H+ + G DV V ++ + YAK + + + VF + ER V SWN++++
Sbjct: 129 HTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPER--DVASWNTVISSFYQRG 186
Query: 224 KFDDSLNFYRHMMYNGFR---LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+ +L + M + F + +T +S S +C E +G+ +H + F+LD
Sbjct: 187 DAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLE---RGKEIHRKYLKKEFELDEY 243
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V + L+ MY +C ++ AR +F + ++ V+W +MI GY +GD + L M G
Sbjct: 244 VNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEG 303
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
P T+ S++ C +S L GK+ Y + ++ + +LID+Y KCG + A
Sbjct: 304 TRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAE 363
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F + +V SW MI+G G + +A+D++ Q++ + ++P+ VTF +VL C+
Sbjct: 364 TVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLA 423
Query: 461 FLEKGWAISIIQYDDKGISYNPELDH--YSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
LEKG I + + + E D S + D+ + G +KEA S+P K D
Sbjct: 424 ALEKGKQIHLSISESR-----LETDELLLSALLDMYSKCGNVKEASRIFNSIP-KKDVVS 477
Query: 519 WGTLLCACKIH 529
W ++ A H
Sbjct: 478 WTVMISAYGSH 488
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 167/323 (51%), Gaps = 2/323 (0%)
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
++ L + + K L K VH + +G+ +DV +C + I+ Y C D A LVF I+
Sbjct: 6 LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCPEALVQ 262
R V WNS+V+G + F D+L ++ ++ + D T +++ ++
Sbjct: 66 IR-SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFL 124
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR++H+ + G DV V ++L+ MY+K + + +FD + +R SW +IS + Q
Sbjct: 125 GRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQ 184
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+GD ++AL LF ME + P+ V++ IS C + LE GK + + V
Sbjct: 185 RGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYV 244
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+AL+DMY +C + ARE+F + K +V+W +MI G G+ ++L ++++
Sbjct: 245 NSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGT 304
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
RP++ T ++L AC+ + L G
Sbjct: 305 RPSQTTLTSILMACSRSRNLLHG 327
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 144/286 (50%), Gaps = 10/286 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
++ + ++SLL ++L Q +LVH + G DV + +LI++Y C D SAR++
Sbjct: 1 MESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLV 60
Query: 302 FDGICDRTRVS-WTAMISGYAQKGDLDEALRLFFA-MEAAGELPDLVTVLSMISGCGQSG 359
F+ I R+ V W +++SGY++ + L++F + +PD T ++I G G
Sbjct: 61 FENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG 120
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
LG+ G +V+V ++L+ MY+K D+ ++F +PE+ V SW T+I+
Sbjct: 121 REFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVIS 180
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G+ +AL+LF ++ D PN V+ + AC+ LE+G I K +
Sbjct: 181 SFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEI-----HRKYLK 235
Query: 480 YNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
ELD Y S + D+ GR L+ A + Q M KS W +++
Sbjct: 236 KEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVA-WNSMI 280
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 16/253 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R ++ WNS IR V + ++ + L +M P+ T I AC++ +L++ +
Sbjct: 269 RRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 328
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+HG++++S + KC + A +F + V SWN M+ G+ +G
Sbjct: 329 FVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVG 388
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ ++ M VG+Q D VT + L K +H ++ D + +
Sbjct: 389 NWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLS 448
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ Y+KC ++K A +F I + + VVSW M++ + ++L + M G
Sbjct: 449 ALLDMYSKCGNVKEASRIFNSIPK--KDVVSWTVMISAYGSHGQPREALYHFDEMQKFGV 506
Query: 241 RLDVTTVVSLLSS 253
+ D T +++LS+
Sbjct: 507 KPDGVTFLAVLSA 519
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 212/656 (32%), Positives = 329/656 (50%), Gaps = 51/656 (7%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIY 72
++ I WN I + L +F M +++ + N + ++ A L+ ++
Sbjct: 41 FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLF 100
Query: 73 SQM-----IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+M +++ + +V+ RL A+K+FD M +DV SWNAML G+AQ GF++
Sbjct: 101 DKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEARE 160
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGI-------------HI 170
+F M + ++ GL A +H L L +S ++ + ++
Sbjct: 161 VFNKM----PHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNM 216
Query: 171 GVDA----------DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
DA DV NT IS YA+ DL A+ +F E +R V +W +MV+G
Sbjct: 217 LGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN--ESPIRDVFTWTAMVSGYV 274
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV-QGRLVHSHGIHYGFDLDV 279
D++ ++ M + + ++L+ +V + +V G L + ++
Sbjct: 275 QNGMVDEARKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAGELFEAMPCR-----NI 325
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
S NT+I+ Y + G I AR LFD + R VSW A+ISGYAQ G +EAL +F M+
Sbjct: 326 SSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRD 385
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
GE + T +S C ALELGK G + V NAL+ MY KCGS +A
Sbjct: 386 GESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEA 445
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
++F + EK VVSW TMIAG A +G +AL LF + + ++P+ +T + VL AC+H+
Sbjct: 446 NDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHS 505
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G +++G D+ + P HY+CM DLLGR G+L+EA + +++MP A W
Sbjct: 506 GLIDRG--TEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASW 563
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
G LL A +IH N E+GE A +FK+EP ++ YV ++N YA GRW V +R+ M+
Sbjct: 564 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREA 623
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
V+K G S + K TF+ D +H E + Y L+ L L R E Y S K +
Sbjct: 624 GVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLV 679
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 320/634 (50%), Gaps = 33/634 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V ++ +L LF Q+ + ++ P+ + AC+ L L + IH HI+
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ +VKC R+ A+K+FD M +++ SW +L G+ Q + +
Sbjct: 277 RYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAME 336
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M G++ D + + L VH++ I + D V N+ I YA
Sbjct: 337 LFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT-YGDKFD--DSLNFYRHMMYNGFRLDV 244
KCD L A VF VV +N+M+ G + G +++ D+LN + M + R +
Sbjct: 397 KCDCLTEARKVFDIFAAD--DVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSL 454
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T VSLL + +L + +H +G +LD+ + LI++YS C + +R++FD
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDE 514
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + V W +M SGY Q+ + +EAL LF ++ + + PD T + M++ G +L+LG
Sbjct: 515 MKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLG 574
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ F GL+ N + NAL+DMY+KCGS DA + F + + VV W ++I+ A +
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD---DKGISYN 481
GE +AL + ++M + PN +TF+ VL AC+H G +E G + Q++ GI
Sbjct: 635 GEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDG----LKQFELMLRFGI--E 688
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
PE +HY CM LLGR G+L EA + ++ MP K A +W +LL C N+E+ EY A
Sbjct: 689 PETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEM 748
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+P + + ++N YA G W +R MK V K PG+S IN + F +
Sbjct: 749 AILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLS 808
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
+D+ H ++ Y VLD L + R H+K I
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQIR-----GHMKLI 837
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 200/406 (49%), Gaps = 22/406 (5%)
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L+Y ++HG I+ S + + + A K+F++M R++ +W+ M+
Sbjct: 60 LLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSA 119
Query: 116 FAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGV 172
GF E L +F + R + + QA + ++ + SF +
Sbjct: 120 CNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRF 179
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D DV V I Y K ++ A LVF + E+ + V+W +M++GC + SL +
Sbjct: 180 DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEK--STVTWTTMISGCVKMGRSYVSLQLF 237
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
+M D + ++LS+ L G+ +H+H + YG + D S++N LI Y KC
Sbjct: 238 YQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKC 297
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + +A LFDG+ ++ +SWT ++SGY Q EA+ LF +M G PD+ S++
Sbjct: 298 GRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSIL 357
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
+ C ALE G Y L ++ V N+LIDMY+KC + +AR++F VV
Sbjct: 358 TSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVV 417
Query: 413 SWTTMIAGCALNG---EFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ MI G + G E +AL++FH + +RP+ +TF+++L+A
Sbjct: 418 LFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 206/429 (48%), Gaps = 22/429 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ I W + + +N HK + LF M + ++P+ I +CA L L +
Sbjct: 312 NKNIISWTTLL-SGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGT 370
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H + +K+ + KCD L A K+FD A DV +NAM+ G++++G
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLG 430
Query: 121 F---LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
L + L +F++MR I+ +T + L +A+ L L K +H G++ D+
Sbjct: 431 TQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIF 490
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ I+ Y+ C LK + LVF E +++ +V WNSM +G + +++LN + +
Sbjct: 491 AGSALIAVYSNCYCLKDSRLVF--DEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQL 548
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ R D T V ++++ +L G+ H + G + + + N L+ MY+KCG +
Sbjct: 549 SRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A FD R V W ++IS YA G+ +AL++ M G P+ +T + ++S C
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSH 668
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-IVVSWTT 416
+G +E G G++ ++ + + G + +AREL +P K + W +
Sbjct: 669 AGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRS 728
Query: 417 MIAGCALNG 425
+++GCA G
Sbjct: 729 LLSGCAKAG 737
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 28/348 (8%)
Query: 137 IQADFVTVMGLTQAAIHAKHLSLL---------KSVHSFGIHIGVDADVSVCNTWISSYA 187
+ A+F + +G+ A+ L L VH I G++ D + N ++ Y+
Sbjct: 31 VNAEFPSTIGIRGRREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYS 90
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL----NFYRHMMYNGFRLD 243
+ + A VF + ER +V+W++MV+ C + +++SL +F+R +
Sbjct: 91 RAGGMVYARKVFEKMPER--NLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEY- 147
Query: 244 VTTVVSLLSSFV--CPEALVQGRL----VHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+LSSF+ C GR + S + FD DV V LI Y K G+ID
Sbjct: 148 ------ILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDY 201
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
AR++FD + +++ V+WT MISG + G +L+LF+ + +PD + +++S C
Sbjct: 202 ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSI 261
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
LE GK + G + + + N LID Y KCG + A +LF +P K ++SWTT+
Sbjct: 262 LPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTL 321
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
++G N EA++LF + + L+P+ ++L +C LE G
Sbjct: 322 LSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFG 369
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/598 (34%), Positives = 316/598 (52%), Gaps = 33/598 (5%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK---SP---FVKCDRLDC-------- 93
+D P+ L+F + C + L + IH I+K SP RL
Sbjct: 16 HDFNPHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPI 72
Query: 94 ----AYKIFDEMAVRDVASWNAMLVGFAQMG--FLENVLRLFYNMRLVGIQADFVTVMGL 147
A + ++ ++ +NA++ G A +E ++ ++ M GI D T+ +
Sbjct: 73 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLV-VYKQMLSKGIVPDNYTIPFV 131
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+A ++ + + VH I +G+ +DV V NT + YA CD ++ A VF +R
Sbjct: 132 LKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR-- 189
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+VSW +M+ G + + + M + D T+V +LSS L GR +H
Sbjct: 190 DLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLH 249
Query: 268 SHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
+ I + +LDV V N L+ MY KCGD + AR +F + + VSW +MISG AQKG
Sbjct: 250 RYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQF 309
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
E+L +F M+ G PD VT++++++ C G LELGKW Y ++ + + NAL
Sbjct: 310 KESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNAL 369
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+KCGSI A +F A+ K V S+T MI G A++G+ +ALDLF ++ ++ + P+
Sbjct: 370 VDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDE 429
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEAL 504
VTF+ VL AC+H G +E+G ++D YN P+L+HY CM DLLGR G + EA
Sbjct: 430 VTFVGVLTACSHVGLVEEGRKY----FEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAE 485
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+F+++MPI+ DA + G LL ACKIH +E+GE V + K+EP YV M+N Y+
Sbjct: 486 EFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSAN 545
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
RW +R MK ++K PG S ++G F D+ H + + Y +LD + H
Sbjct: 546 RWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSH 603
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 223/449 (49%), Gaps = 20/449 (4%)
Query: 15 RSSTINQWNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
R+ + +N+ IR A + N++ + L++++QM I P+N T PF+ KACA+ +
Sbjct: 85 RTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREG 144
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +HG +K + CD + A K+FD RD+ SW M+ G+ +M
Sbjct: 145 EEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKM 204
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSV 178
GF + LF+ M +QAD +T++ + + L L + +H + I + V+ DV V
Sbjct: 205 GFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFV 264
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N + Y KC D A VF E ++ VVSWNSM++G +F +SL +R M
Sbjct: 265 GNALVDMYLKCGDANFARKVFQ--EMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRL 322
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + D T+V++L+S L G+ VH++ D + N L+ MY+KCG ID A
Sbjct: 323 GVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQA 382
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F + + S+TAMI G A G +AL LF M G PD VT + +++ C
Sbjct: 383 CWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHV 442
Query: 359 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTT 416
G +E G K+F++ + L+ + ++D+ + G I +A E +P E
Sbjct: 443 GLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGA 502
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPN 445
++ C ++G+ + ++ +++ R +
Sbjct: 503 LLGACKIHGKVELGESVMKKIEKIEPRKD 531
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 321/627 (51%), Gaps = 24/627 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ + N + + + F M + PN F + +AC+ + ++I+G +V
Sbjct: 114 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 173
Query: 82 KSPFVKCD----------------RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K+ +++ D L AYK+FD+M R++ +W M+ FAQ+G +
Sbjct: 174 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 233
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF +M L G D T + A L+L K +HS I +G+ DV V + +
Sbjct: 234 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 293
Query: 186 YAKC---DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFR 241
YAKC + + VF + E V+SW +++ + D +++ + M+ R
Sbjct: 294 YAKCAADGSVDDSRKVFEQMPEH--NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 351
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ + S+L + G V+S+ + G V N+LISMY++ G ++ AR
Sbjct: 352 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 411
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + ++ VS+ A++ GYA+ +EA LF + G T S++SG GA+
Sbjct: 412 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 471
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ GG K N +CNALI MYS+CG+I A ++F + ++ V+SWT+MI G
Sbjct: 472 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 531
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A +G AL++FH+++E +PN +T++AVL AC+H G + +G Y + GI
Sbjct: 532 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV-- 589
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++HY+CM DLLGR G L EA++F+ SMP+ +DA +W TLL AC++H N E+G + A
Sbjct: 590 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM 649
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ + EP A Y+ ++N +A G+W V IR MK + K G S + + F
Sbjct: 650 ILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHV 709
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
+ H ++ Y LD LA +E Y
Sbjct: 710 GETSHPQAWQIYQELDQLASKIKEMGY 736
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 180/324 (55%), Gaps = 9/324 (2%)
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D T L ++ I ++ L K VH + G++ D V NT IS Y+KC D + A L+F
Sbjct: 43 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 102
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
G+ + R +VSW++MV+ C + + ++ + M+ GF + +++ +
Sbjct: 103 EGMGNK-RDLVSWSAMVS-CFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 160
Query: 259 ALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSK-CGDIDSARVLFDGICDRTRVSWTAM 316
G +++ + G+ + DV V LI M+ K GD+ SA +FD + +R V+WT M
Sbjct: 161 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 220
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I+ +AQ G +A+ LF ME +G +PD T S++S C + G L LGK + GL
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 280
Query: 377 KDNVMVCNALIDMYSKC---GSIGDARELFYALPEKIVVSWTTMIAGCALNGEF-VEALD 432
+V V +L+DMY+KC GS+ D+R++F +PE V+SWT +I +GE EA++
Sbjct: 281 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 340
Query: 433 LFHQLMELDLRPNRVTFLAVLQAC 456
LF +++ +RPN +F +VL+AC
Sbjct: 341 LFCKMISGHIRPNHFSFSSVLKAC 364
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 221/467 (47%), Gaps = 24/467 (5%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N IR+ ++ H M Q + P+ T+ + K+C + + +++H +++
Sbjct: 14 NRLIRQ-LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQ 72
Query: 83 SP--------------FVKCDRLDCAYKIFDEMA-VRDVASWNAMLVGFAQMGFLENVLR 127
S + KC + A IF+ M RD+ SW+AM+ FA +
Sbjct: 73 SGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIW 132
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSY 186
F +M +G + + +A +A + + + ++ F + G ++ADV V I +
Sbjct: 133 TFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMF 192
Query: 187 AK-CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
K DL A VF + E R +V+W M+ D+++ + M +G+ D
Sbjct: 193 VKGSGDLGSAYKVFDKMPE--RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 250
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---GDIDSARVLF 302
T S+LS+ L G+ +HS I G LDV V +L+ MY+KC G +D +R +F
Sbjct: 251 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 310
Query: 303 DGICDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
+ + + +SWTA+I+ Y Q G+ D EA+ LF M + P+ + S++ CG
Sbjct: 311 EQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 370
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ +YA G+ V N+LI MY++ G + DAR+ F L EK +VS+ ++ G
Sbjct: 371 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 430
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A N + EA LF+++ + + + TF ++L G + KG I
Sbjct: 431 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 477
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G L A M PDL T ++ C + +LGK GL+ + +V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 384 NALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N LI +YSKCG AR +F + K +VSW+ M++ A N +A+ F ++EL
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISII 471
PN F AV++AC++ + W II
Sbjct: 143 YPNEYCFAAVIRACSNANY---AWVGEII 168
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 313/612 (51%), Gaps = 18/612 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V + + + LF QM++ + + + ++CA + L ++ +H H +
Sbjct: 220 WGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAI 279
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K L A + F + +V + NAM+VG + G ++
Sbjct: 280 KNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQ 339
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G+ D +++ G+ A K VH + G D DV V N + Y
Sbjct: 340 LFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYG 399
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A LVF +E+R VSWN+++A + ++D++ M+ +G D T
Sbjct: 400 KCKALVEAYLVFQEMEQR--DSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTY 457
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + ++L G +VH I G LD V +T++ MY KCG I A+ L D I
Sbjct: 458 GSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGG 517
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW ++ISG++ +EA R F M G PD T +++ C +ELGK
Sbjct: 518 QELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQI 577
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ + + + L+DMY+KCG++ D+ +F + VSW MI G AL+G+
Sbjct: 578 HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQG 637
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+EAL++F ++ ++ PN TF+AVL+AC+H G L+ G P+L+H+
Sbjct: 638 LEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDG--CQYFHLMTSRYKLVPQLEHF 695
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM D+LGR +EAL+F++SMPI++DA +W TLL CKI ++E+ E A + +L+P
Sbjct: 696 ACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDP 755
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
A+ Y+ ++N YA G+W V+ R +M++ +++K PG S + + F D+ H
Sbjct: 756 DDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHP 815
Query: 608 ESELTYPVLDCL 619
S+ Y +L+ L
Sbjct: 816 RSKEVYEMLNSL 827
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 228/524 (43%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I ++ L +M + + + T + K+C L DL IH V
Sbjct: 119 WNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAV 178
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC LD A + F M R+ SW A + G Q +
Sbjct: 179 KTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGME 238
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ +G+ ++ LS + +H+ I +D V + YA
Sbjct: 239 LFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYA 298
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K +L A F G+ V + N+M+ G +++ ++ M +G DV ++
Sbjct: 299 KAGNLVDARRAFIGLPH--HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISL 356
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ S+ + QG VH + GFD+DV V N ++ +Y KC + A ++F +
Sbjct: 357 SGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 416
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ Q ++ + M +G PD T S++ C +LE G
Sbjct: 417 RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVV 476
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A GL + V + ++DMY KCG+I +A++L + + +VSW ++I+G +L +
Sbjct: 477 HGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQS 536
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELD 485
EA F +++++ ++P+ T+ VL C + +E G I II+ + G Y
Sbjct: 537 EEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYIS--- 593
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G + ++L + K D W ++C +H
Sbjct: 594 --STLVDMYAKCGNMPDSLLMFEKAR-KLDFVSWNAMICGYALH 634
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 189/423 (44%), Gaps = 9/423 (2%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ +V D A +F M DV SWN ++ G+ Q G N + L M G+ D
Sbjct: 93 TAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRT 152
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ L ++ L+L +H+ + G++ DV + + Y KC L A F G+
Sbjct: 153 TLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGM 212
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
ER VSW + +AGC +++ + + M G + S S L
Sbjct: 213 GER--NSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLST 270
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
R +H+H I F D V ++ +Y+K G++ AR F G+ + AM+ G +
Sbjct: 271 ARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVR 330
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G EA++LF M +G D++++ + S C + G A G +V V
Sbjct: 331 TGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCV 390
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
NA++D+Y KC ++ +A +F + ++ VSW +IA N + + + ++++ +
Sbjct: 391 RNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGM 450
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKL 500
P+ T+ +VL+AC LE G + K I LD + S + D+ + G +
Sbjct: 451 EPDDFTYGSVLKACAGLQSLEYGLVV-----HGKAIKSGLGLDAFVSSTVVDMYCKCGAI 505
Query: 501 KEA 503
EA
Sbjct: 506 TEA 508
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 263 GRLVHSHGIHYGFDL----DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
G H+HG+ FD D NT+++ Y GD D+A LF + D VSW +IS
Sbjct: 68 GGTAHAHGV---FDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLIS 124
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY Q G ++ L M G D T+ ++ CG L LG A GL+
Sbjct: 125 GYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLET 184
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V +AL+DMY KC S+ DA F+ + E+ VSW IAGC N ++ ++LF Q+
Sbjct: 185 DVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQ 244
Query: 439 ELDLRPNRVTFLAVLQAC 456
L L ++ + + ++C
Sbjct: 245 RLGLGVSQPAYASAFRSC 262
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 37/205 (18%)
Query: 355 CGQSG--ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI---------------- 396
C +G AL G+ G V N L+ MY++CG
Sbjct: 27 CASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTV 86
Query: 397 ------------GD---ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
GD A LF +P+ VVSW T+I+G +G F ++ L ++
Sbjct: 87 SWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRG 146
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+ +R T +L++C L G I + ++ S + D+ G+ L
Sbjct: 147 VALDRTTLAVLLKSCGGLDDLALGVQIHALAVK---TGLETDVRAGSALVDMYGKCRSLD 203
Query: 502 EALDFVQSMPIKSDAGIWGTLLCAC 526
+AL F M ++ WG + C
Sbjct: 204 DALRFFHGMGERNSVS-WGAAIAGC 227
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/633 (32%), Positives = 327/633 (51%), Gaps = 36/633 (5%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N Q +EA+N LF ++++ + + + K C L D I + +H +K
Sbjct: 70 NDQNKEALN---------LFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 83 SPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
FV K + ++ ++FDEM V++V SW ++L G+ Q G E L+L
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M+L GI+ + T + + VH+ I G+D+ + V N+ ++ Y+K
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ A+ VF +E R VSWNSM+AG T G + FYR M G +L T
Sbjct: 241 SLMVSDAKAVFDSMENR--NAVSWNSMIAGFVTNGLDLEAFELFYR-MRLEGVKLTQTIF 297
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF---DG 304
+++ + + + +H I G D D+++ L+ YSKC +ID A LF G
Sbjct: 298 ATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHG 357
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQ-SGALE 362
+ + VSWTA+ISGY Q G D A+ LF M G P+ T S+++ C + ++E
Sbjct: 358 V--QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVE 415
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
GK F + + G + + V +AL+ MY+K G+I A E+F ++ +VSW +MI+G A
Sbjct: 416 QGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA 475
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+G ++L +F ++ +L + +TF+ V+ ACTH G + +G + D I P
Sbjct: 476 QHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIV--P 533
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
++HYSCM DL R G L++A+D + MP + A IW TLL AC++HLN+++GE A L
Sbjct: 534 TMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKL 593
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
L+P +A YV ++N YA G W A +R +M +VKK G S + KT +F A
Sbjct: 594 ISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAG 653
Query: 603 DRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
D H +S+ Y L+ L++ ++ Y K++
Sbjct: 654 DLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYV 686
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 206/431 (47%), Gaps = 25/431 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + W S + + L LF QM+ I+PN TF + A +
Sbjct: 154 RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGV 213
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H ++KS + K + A +FD M R+ SWN+M+ GF G
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273
Query: 121 FLENVLRLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
LFY MRL G+ Q F TV+ L + K +S K +H I G D D++
Sbjct: 274 LDLEAFELFYRMRLEGVKLTQTIFATVIKL---CANIKEMSFAKQLHCQVIKNGSDFDLN 330
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ + +Y+KC ++ A +FC + ++ VVSW ++++G + D ++N + M
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLFC-MMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 238 -NGFRLDVTTVVSLLSSFVCPEALV-QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G + T S+L++ P A V QG+ HS I GF + V + L++MY+K G+I
Sbjct: 390 EEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNI 449
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+SA +F DR VSW +MISGYAQ G ++L++F M + D +T + +IS C
Sbjct: 450 ESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISAC 509
Query: 356 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS- 413
+G + G ++FD + + + ++D+YS+ G + A +L +P +
Sbjct: 510 THAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATI 569
Query: 414 WTTMIAGCALN 424
W T++A C ++
Sbjct: 570 WRTLLAACRVH 580
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 321/627 (51%), Gaps = 24/627 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ + N + + + F M + PN F + +AC+ + ++I+G +V
Sbjct: 96 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 155
Query: 82 KSPFVKCD----------------RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K+ +++ D L AYK+FD+M R++ +W M+ FAQ+G +
Sbjct: 156 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 215
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF +M L G D T + A L+L K +HS I +G+ DV V + +
Sbjct: 216 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 275
Query: 186 YAKC---DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFR 241
YAKC + + VF + E V+SW +++ + D +++ + M+ R
Sbjct: 276 YAKCAADGSVDDSRKVFEQMPEH--NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 333
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ + S+L + G V+S+ + G V N+LISMY++ G ++ AR
Sbjct: 334 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 393
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + ++ VS+ A++ GYA+ +EA LF + G T S++SG GA+
Sbjct: 394 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 453
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ GG K N +CNALI MYS+CG+I A ++F + ++ V+SWT+MI G
Sbjct: 454 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 513
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A +G AL++FH+++E +PN +T++AVL AC+H G + +G Y + GI
Sbjct: 514 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV-- 571
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++HY+CM DLLGR G L EA++F+ SMP+ +DA +W TLL AC++H N E+G + A
Sbjct: 572 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEM 631
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ + EP A Y+ ++N +A G+W V IR MK + K G S + + F
Sbjct: 632 ILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHV 691
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
+ H ++ Y LD LA +E Y
Sbjct: 692 GETSHPQAWQIYQELDQLASKIKEMGY 718
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 180/324 (55%), Gaps = 9/324 (2%)
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D T L ++ I ++ L K VH + G++ D V NT IS Y+KC D + A L+F
Sbjct: 25 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 84
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
G+ + R +VSW++MV+ C + + ++ + M+ GF + +++ +
Sbjct: 85 EGMGNK-RDLVSWSAMVS-CFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 142
Query: 259 ALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSK-CGDIDSARVLFDGICDRTRVSWTAM 316
G +++ + G+ + DV V LI M+ K GD+ SA +FD + +R V+WT M
Sbjct: 143 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 202
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I+ +AQ G +A+ LF ME +G +PD T S++S C + G L LGK + GL
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 262
Query: 377 KDNVMVCNALIDMYSKC---GSIGDARELFYALPEKIVVSWTTMIAGCALNGEF-VEALD 432
+V V +L+DMY+KC GS+ D+R++F +PE V+SWT +I +GE EA++
Sbjct: 263 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 322
Query: 433 LFHQLMELDLRPNRVTFLAVLQAC 456
LF +++ +RPN +F +VL+AC
Sbjct: 323 LFCKMISGHIRPNHFSFSSVLKAC 346
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 215/454 (47%), Gaps = 23/454 (5%)
Query: 36 HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP----------- 84
H M Q + P+ T+ + K+C + + +++H +++S
Sbjct: 8 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTL 67
Query: 85 ---FVKCDRLDCAYKIFDEMA-VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ KC + A IF+ M RD+ SW+AM+ FA + F +M +G +
Sbjct: 68 ISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 127
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSYAK-CDDLKMAELV 198
+ +A +A + + + ++ F + G ++ADV V I + K DL A V
Sbjct: 128 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKV 187
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F + E R +V+W M+ D+++ + M +G+ D T S+LS+
Sbjct: 188 FDKMPE--RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---GDIDSARVLFDGICDRTRVSWTA 315
L G+ +HS I G LDV V +L+ MY+KC G +D +R +F+ + + +SWTA
Sbjct: 246 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 305
Query: 316 MISGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
+I+ Y Q G+ D EA+ LF M + P+ + S++ CG G+ +YA
Sbjct: 306 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 365
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G+ V N+LI MY++ G + DAR+ F L EK +VS+ ++ G A N + EA LF
Sbjct: 366 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 425
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+++ + + + TF ++L G + KG I
Sbjct: 426 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 459
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G L A M PDL T ++ C + +LGK GL+ + +V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 384 NALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N LI +YSKCG AR +F + K +VSW+ M++ A N +A+ F ++EL
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISII 471
PN F AV++AC++ + W II
Sbjct: 125 YPNEYCFAAVIRACSNANY---AWVGEII 150
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 317/622 (50%), Gaps = 19/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR V+ + + +M+ + +N T+PF+ KAC L DL + +HG ++
Sbjct: 94 WNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVI 153
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + K ++ A +F EM VRD+ SWN+M+ G+ +G L
Sbjct: 154 KSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLS 213
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M+ GI+ D +V+G+ A L K +H + ++ DV V + + YA
Sbjct: 214 CFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYA 273
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTT 246
KC + AE +F I ++ ++V+WN+M+ G + + +S + R M G D T
Sbjct: 274 KCGRMDYAERLFDQITDK--SIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWIT 331
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+++LL EA++ G+ VH I GF + + L+ MY +CG + A LF +
Sbjct: 332 MINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMN 391
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R +SW AMI+ Y + G+ +A+ LF + PD T+ S++ + +L +
Sbjct: 392 ERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQ 451
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y L N V N+++ MY KCG++ ARE+F + K V+SW T+I A++G
Sbjct: 452 IHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGF 511
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+++LF ++ E PN TF+++L +C+ G + +GW D I NP ++H
Sbjct: 512 GRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNI--NPGIEH 569
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y C+ DL+GR G L A +F++ MP+ A IWG+LL A + ++E+ E A + LE
Sbjct: 570 YGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLE 629
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
+ YV ++N YA GRW+ V I+ MK+ ++K G S+ ++ KT F +DR
Sbjct: 630 HDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSD 689
Query: 607 AESELTYPVLDCLALHSREEAY 628
E + Y VLD ++ E+ Y
Sbjct: 690 NEINMVYDVLDIISKKIGEDVY 711
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 228/453 (50%), Gaps = 17/453 (3%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S +V+ + A +F+ M D WN M+ GF G + + ++ M G++ D
Sbjct: 68 SSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNF 127
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + +A L+ + VH I G+D D+ + N+ I YAK ++ AE+VF
Sbjct: 128 TYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVF--R 185
Query: 203 EERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
E +R +VSWNSM++G + GD + SL+ +R M +G +LD +V+ +L + L
Sbjct: 186 EMPVRDLVSWNSMISGYVSVGDGW-RSLSCFREMQASGIKLDRFSVIGILGACSLEGFLR 244
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G+ +H + +LDV V +L+ MY+KCG +D A LFD I D++ V+W AMI GY+
Sbjct: 245 NGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYS 304
Query: 322 QKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
E+ M+ G+L PD +T+++++ C Q A+ LGK +A G ++
Sbjct: 305 LNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHL 364
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
++ AL+DMY +CG + A LF + E+ ++SW MIA NGE +A+ LF L
Sbjct: 365 VLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNK 424
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD----LLGR 496
L+P+ T ++L A L + I G +LD + +++ + G+
Sbjct: 425 TLKPDATTIASILPAYAELASLREAEQI-------HGYVTKLKLDSNTFVSNSIVFMYGK 477
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G L A + M K D W T++ A IH
Sbjct: 478 CGNLLRAREIFDRMTFK-DVISWNTVIMAYAIH 509
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%)
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+S Y + G + +A LF+ + W MI G+ G +A+ + ME G D
Sbjct: 67 LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T +I CG L G+ GL ++ + N+LI MY+K G I A +F
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+P + +VSW +MI+G G+ +L F ++ ++ +R + + +L AC+ GFL G
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNG 246
Query: 466 WAI 468
I
Sbjct: 247 KEI 249
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/527 (36%), Positives = 289/527 (54%), Gaps = 8/527 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + K ++ A+++FDEM D S+N ++ +A+ G + +LF MR + D
Sbjct: 82 SAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGF 141
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ G+ A ++ L++ +H+ + G+D+ VSV N I+SY+K LK A +F +
Sbjct: 142 TLSGIITAC--GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWL 199
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R VSWNSMV + +L Y M G +D+ T+ S+L++F + L+
Sbjct: 200 SED-RDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLG 258
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARVLFDGICDRTRVSWTAMISGYA 321
G H+ I G+ + V + LI +YSKCG + R +FD I + V W MISGY+
Sbjct: 259 GLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYS 318
Query: 322 QKGDL-DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN- 379
DL DEAL F ++ G PD +++ +IS C + G+ A + N
Sbjct: 319 LYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNR 378
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V NALI MYSKCG++ DA+ LF +PE VS+ +MIAG A +G ++L LF +++E
Sbjct: 379 ISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLE 438
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+D P +TF++VL AC HTG +E G + GI PE H+SCM DLLGR GK
Sbjct: 439 MDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGI--EPEAGHFSCMIDLLGRAGK 496
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L EA ++++P W LL AC+IH N+E+ A L +L+P +AAPYV +AN
Sbjct: 497 LSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANI 556
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
Y+ GR A++R +M+ VKK PG S +N + F AED +H
Sbjct: 557 YSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFH 603
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 3/191 (1%)
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D +V NTLIS Y+K ++ A LFD + VS+ +I+ YA++GD A +LF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M A D T+ +I+ CG + + L + + GL V V NALI YSK G
Sbjct: 131 MREAFLDMDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 396 IGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ +AR +F+ L E + VSW +M+ + E +AL+L+ ++ L + T +VL
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 455 ACTHTGFLEKG 465
A T+ L G
Sbjct: 249 AFTNVQDLLGG 259
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 152/331 (45%), Gaps = 25/331 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + E K L L+ +M + + T + A + DL+ H ++
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLI 267
Query: 82 KSP--------------FVKCD--RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL-EN 124
KS + KC LDC K+FDE++ D+ WN M+ G++ L +
Sbjct: 268 KSGYHQNSHVGSGLIDLYSKCGGCMLDCR-KVFDEISNPDLVLWNTMISGYSLYEDLSDE 326
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 183
L F ++ VG + D +++ + A + S + VH + + + ++ +SV N I
Sbjct: 327 ALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALI 386
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y+KC +L+ A+ +F + E VS+NSM+AG +G F SL+ ++ M+ F
Sbjct: 387 AMYSKCGNLRDAKTLFDTMPE--HNTVSYNSMIAGYAQHGMGF-QSLHLFQRMLEMDFTP 443
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHS-HGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T +S+L++ + G++ + +G + + + +I + + G + A L
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL 503
Query: 302 FDGIC-DRTRVSWTAMISGYAQKGDLDEALR 331
+ I D W+A++ G+++ A++
Sbjct: 504 IETIPFDPGFFXWSALLGACRIHGNVELAIK 534
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 313/600 (52%), Gaps = 23/600 (3%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI---VKSPF---- 85
EAH L ++M D+ ++ + +AC KL L ++IH + VK+P
Sbjct: 69 KEAHDFL---KEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIE 125
Query: 86 -----VKCDRLDC--AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
+ CD C K+FDEM ++++ SW ++ +A+ G LE +RLF +M+ GI+
Sbjct: 126 NCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIR 185
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ M L Q+ + L L K +HS I ++A+++V + Y +C L+ A+LV
Sbjct: 186 PNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLV 245
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP- 257
F G++ + V+W ++ G T K + +L + M G LD V S++ C
Sbjct: 246 FDGMDAQ--NAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELD-EFVFSIVLKVCCGL 302
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
E GR +HSH + G + +VSV L+ Y KCGDI+SA F I + VSW+A+I
Sbjct: 303 EDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALI 362
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SG++Q G L++ +++F ++ + G + + S+ C L +G A GL
Sbjct: 363 SGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ +A++ MYSKCG + AR F ++ E V+WT +I+G A +G EAL F ++
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRM 482
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+RPN VTF+AVL AC+H+G + + D G+ P +DHY CM D R
Sbjct: 483 QSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGV--KPTIDHYDCMIDTYSRA 540
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G L+EAL+ + MP + DA W +LL C H ++++G+ A LF+L+P A Y+ +
Sbjct: 541 GLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLF 600
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N Y+ G+W+ ++R +M ++KK S + G+ F DR+H ++E Y L+
Sbjct: 601 NLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLE 660
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 202/416 (48%), Gaps = 18/416 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I E K + LF M+ + I PN+ + + ++C S L + IH H++
Sbjct: 156 WVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVI 215
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ +V+C L+ A +FD M ++ +W ++VG+ Q LE L
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALE 275
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + G++ D + + + + + +HS + +G +++VSV + Y
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYV 335
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A F I E VSW+++++G + + +D + + + G L+
Sbjct: 336 KCGDIESAYRSFGRISE--PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+ + L G H I G + + +++MYSKCG +D AR F+ I +
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKW 366
V+WTA+ISGYA G+ EAL F M++ G P+ VT +++++ C SG + E ++
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
+ + G+K + + +ID YS+ G + +A EL +P E +SW +++ GC
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGC 569
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 198/567 (34%), Positives = 301/567 (53%), Gaps = 8/567 (1%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
Y + + + + + K + A ++FDE+ D+ S+N ++ +A G LRLF
Sbjct: 72 YPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEE 131
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
+R + + D T+ G+ A + L++ +H F + G D SV N ++ Y++
Sbjct: 132 VRELRLGLDGFTLSGVITAC--GDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGF 189
Query: 192 LKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
L A VF + E R VSWN+M+ C + +++ +R M+ G ++D+ T+ S+
Sbjct: 190 LSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASV 249
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSARVLFDGICDRT 309
L++F C + LV GR H I GF + V + LI +YSKC G + R +F+ I
Sbjct: 250 LTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPD 309
Query: 310 RVSWTAMISGYAQKGDLDE-ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
V W MISG++ DL E L F M+ G PD + + + S C + LGK
Sbjct: 310 LVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVH 369
Query: 369 NYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A + N V V NAL+ MYSKCG++ DAR +F +PE VS +MIAG A +G
Sbjct: 370 ALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVE 429
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
VE+L LF ++E D+ PN +TF+AVL AC HTG +E+G + + I PE +HY
Sbjct: 430 VESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCI--EPEAEHY 487
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SCM DLLGR GKLKEA +++MP + W TLL AC+ H N+E+ A +LEP
Sbjct: 488 SCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEP 547
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++AAPYV ++N YA RW+ A ++ +M+ VKK PG S I+ K F AED H
Sbjct: 548 YNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHP 607
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKW 634
+ + + + ++ Y ++W
Sbjct: 608 MIKEIHVYMGKMLKKMKQAGYVPDIRW 634
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 26/345 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I E + + LFR+M + ++ + T + A + DL+ + HG ++
Sbjct: 211 WNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMI 270
Query: 82 KSPF--------------VKC--DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL-EN 124
KS F KC ++C K+F+E+ D+ WN M+ GF+ L E+
Sbjct: 271 KSGFHGNSHVGSGLIDLYSKCAGSMVECR-KVFEEITAPDLVLWNTMISGFSLYEDLSED 329
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 183
L F M+ G + D + + +T A + SL K VH+ I V + VSV N +
Sbjct: 330 GLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALV 389
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y+KC ++ A VF + E VS NSM+AG +SL + M+ +
Sbjct: 390 AMYSKCGNVHDARRVFDTMPE--HNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPN 447
Query: 244 VTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVL 301
T +++LS+ V + +G + + + + + + +I + + G + A R++
Sbjct: 448 SITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGELP 343
+ + W ++ + G+++ A++ F +E P
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAP 552
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 36/252 (14%)
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS-- 297
+ L + T +LL + + L+ G+++H+ + N +YSKCG + +
Sbjct: 5 YPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64
Query: 298 -----------------------------ARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
AR +FD I VS+ +I+ YA +G+
Sbjct: 65 TSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGP 124
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
LRLF + D T+ +I+ CG + L + + G V NA++
Sbjct: 125 TLRLFEEVRELRLGLDGFTLSGVITACGDD--VGLVRQLHCFVVVCGHDCYASVNNAVLA 182
Query: 389 MYSKCGSIGDARELFYALPE---KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
YS+ G + +AR +F + E + VSW MI C + E +EA+ LF +++ L+ +
Sbjct: 183 CYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVD 242
Query: 446 RVTFLAVLQACT 457
T +VL A T
Sbjct: 243 MFTMASVLTAFT 254
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 313/615 (50%), Gaps = 26/615 (4%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE----PNNLTFPFIAKAC 64
R+ +I + WNS IR + + + LL QM + D E P+ T + C
Sbjct: 240 RVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVC 299
Query: 65 AKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWN 110
A+ ++ + +HG +K + KC ++ A IF ++V SWN
Sbjct: 300 ARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWN 359
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
M+ GF+ G + L M G ++AD VT++ L LK +H + +
Sbjct: 360 TMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSL 419
Query: 169 HIG-VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
V + V N +++SYAKC L A VFC I R +TV SWN+++ G +
Sbjct: 420 KQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSI--RSKTVNSWNALIGGYSQSSDPRL 477
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
SL+ Y M +G D+ TV SLLS+ ++L G+ VH I + D V +L+S
Sbjct: 478 SLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLS 537
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
+Y CG++ +A VLFD + D+T VSW M++GY Q G + AL LF M G P ++
Sbjct: 538 LYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEIS 597
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
++S+ C +L LG+ YA L+DN + ++IDMY+K GS+ ++ ++F L
Sbjct: 598 MMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLK 657
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
E+ V SW M+ G ++G EA+ LF ++ P+ +TFL VL AC H+G + +G
Sbjct: 658 ERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEG-- 715
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF-VQSMPIKSDAGIWGTLLCAC 526
++ + NP L HY+C+ D+L R GKL EAL + M + GIW LL +C
Sbjct: 716 LTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSC 775
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+IH N+E+GE +A LF EP YV ++N YA G+WD V +R MK ++K G
Sbjct: 776 RIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAG 835
Query: 587 QSLFHINGKTCTFTA 601
S +NGK +F A
Sbjct: 836 CSWIELNGKVFSFVA 850
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 252/542 (46%), Gaps = 38/542 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYS 73
R + QWN+ I H L +F +M ++ + P+N TFP + KACA +S++
Sbjct: 144 RKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVG 203
Query: 74 QMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+HG +VK+ V+ + A ++F M R++ SWN+M+ F+
Sbjct: 204 LAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDN 263
Query: 120 GFLENVLRLFYNMR----LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
G E L M + D T+ + + + + K VH + + +D +
Sbjct: 264 GLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKE 323
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V V N + Y+KC + A+++F + VVSWN+MV G + + + R M
Sbjct: 324 VVVNNALMDMYSKCGCINDAQVIF--KLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQM 381
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRL--VHSHGIHYGFDLDVSVI-NTLISMYSKC 292
+ G L V L + VC E V L +H + + F + ++ N ++ Y+KC
Sbjct: 382 LAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKC 441
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + A +F I +T SW A+I GY+Q D +L +F M+++G LPDL TV S++
Sbjct: 442 GSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLL 501
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S C Q +L+LGK L+ + V +L+ +Y CG + A LF A+ +K +V
Sbjct: 502 SACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLV 561
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT-----HTGFLEKGWA 467
SW TM+ G NG AL LF Q++ ++P ++ ++V AC+ G G+A
Sbjct: 562 SWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYA 621
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ + D+ I+ + + D+ + G + E+ + +S A W ++
Sbjct: 622 LKCLLEDNAFIACS--------VIDMYAKNGSVMESFKVFNGLKERSVAS-WNAMVMGYG 672
Query: 528 IH 529
IH
Sbjct: 673 IH 674
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 179/386 (46%), Gaps = 10/386 (2%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMG 146
C D + +FD + +++ WNA++ +++ NVL +F M G+ D T
Sbjct: 130 CGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPC 189
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ +A + + +VH + + DV V N +S Y + A VF + E
Sbjct: 190 VVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPE-- 247
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN----GFRLDVTTVVSLLSSFVCPEALVQ 262
R +VSWNSM+ + ++ MM F DV T+ ++L +
Sbjct: 248 RNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGV 307
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ VH + D +V V N L+ MYSKCG I+ A+V+F ++ VSW M+ G++
Sbjct: 308 GKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSA 367
Query: 323 KGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDN 379
GD+ + L M A G D VT+L+ + C + L K Y+ + +N
Sbjct: 368 AGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNN 427
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+V NA + Y+KCGS+ A +F ++ K V SW +I G + + + +LD + Q+
Sbjct: 428 ELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKS 487
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKG 465
L P+ T ++L AC+ L+ G
Sbjct: 488 SGLLPDLFTVCSLLSACSQIKSLKLG 513
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 12/220 (5%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELP 343
+I+MYS CG D +R +FD + + W A+IS Y++ L +F M +G LP
Sbjct: 123 VITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLP 182
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T ++ C +++G L ++V V NAL+ Y GS+ DA +F
Sbjct: 183 DNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVF 242
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD----LRPNRVTFLAVLQACTHT 459
+PE+ +VSW +MI + NG E L Q+ME D P+ T VL C
Sbjct: 243 KIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARD 302
Query: 460 GFLEKGWAIS----IIQYDDKGISYNPELDHYS---CMAD 492
+ G + + D + + N +D YS C+ D
Sbjct: 303 REIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCIND 342
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 356 GQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
G+ ++LG+ S L ++ ++C +I MYS CGS D+R +F AL +K + W
Sbjct: 92 GRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW 151
Query: 415 TTMIAGCALNGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
+I+ + N + L++F +++ E L P+ TF V++AC ++ G A+ +
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
+ + ++ + + G G + +AL + MP
Sbjct: 212 KTRLVE---DVFVSNALVSFYGTNGSVSDALRVFKIMP 246
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 322/629 (51%), Gaps = 19/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN ++ E + + + F M +I+ + +T + A A DL + +HG V
Sbjct: 872 WNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAV 931
Query: 82 KSPFVK-----------CDRLDCAY---KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS ++ CAY ++F++M D+ SWN+M+ AQ E +
Sbjct: 932 KSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVN 991
Query: 128 LFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF ++ G++ D T+ + +A + L++ + +H + G AD V T I Y
Sbjct: 992 LFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVY 1051
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+K ++ AE +F ++ + WN+M+ G G+ +L + + +G + D T
Sbjct: 1052 SKSGKMEEAEFLFQNKDDL--DLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQIT 1109
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ + + C L QG+ +H+H I GFD D+ V + ++ MY KCGD+ +A ++F+ I
Sbjct: 1110 LATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS 1169
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
V+WT+MISG G+ D+ALR++ M + +PD T ++I ALE G+
Sbjct: 1170 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQ 1229
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ V +L+DMY+KCG+I DA LF + + + W M+ G A +G
Sbjct: 1230 LHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGN 1289
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EA++LF + + P+RV+F+ +L AC+H G + + +D GI PE++H
Sbjct: 1290 AEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE--PEIEH 1347
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSC+ D LGR G ++EA +++MP K+ A I LL AC+I ++E G+ VA LF LE
Sbjct: 1348 YSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALE 1407
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P +A YV ++N YA RWD V + R MMKR VKK PG S + F +DR H
Sbjct: 1408 PFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSH 1467
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKWI 635
++++ Y ++ + RE+ Y +++
Sbjct: 1468 PQADIIYDKVEEMMKTIREDGYVPDTEFV 1496
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 194/453 (42%), Gaps = 42/453 (9%)
Query: 31 NKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-------- 82
N A + L LFR ++ + +T + K C L ++ +HG+ +K
Sbjct: 704 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 763
Query: 83 ------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
+ + KC R+ A +FD M RDV WN ML G+ Q+G + +LF G
Sbjct: 764 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 823
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ D +V +L V G W++ + K++
Sbjct: 824 LRPDEFSVQ------------LILNGVSEVNWDEG---------KWLADQVQAYAAKLS- 861
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
+ + V WN ++ C + ++ + +M D T++ +L++
Sbjct: 862 -----LSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAG 916
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
+ L G+ VH + G D DVSV N+L++MYSK G AR +F+ + +SW +M
Sbjct: 917 TDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSM 976
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ-SGALELGKWFDNYACSGG 375
IS AQ +E++ LF + G PD T+ S++ C L + + +A G
Sbjct: 977 ISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTG 1036
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+ V LID+YSK G + +A LF + + W M+ G + + +AL+LF
Sbjct: 1037 NIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFS 1096
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ + + +++T +AC L++G I
Sbjct: 1097 LIHKSGEKSDQITLATAAKACGCLVLLDQGKQI 1129
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 170/378 (44%), Gaps = 32/378 (8%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM-----GFLENVLRLFYNMRLVGIQA 139
+ KC L A ++FD RD+ +WNA+L +A G + L LF +R
Sbjct: 666 YSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGST 725
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
+T+ + + +++ L + VH + I IG++ DV V ++ Y+KC ++ A L+F
Sbjct: 726 TRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLF 785
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ E R VV WN M+ G ++ + +G R D +V +L+ V
Sbjct: 786 DWMRE--RDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG-VSEVN 842
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+G+ + Y L +S N D C W +S
Sbjct: 843 WDEGKWLADQVQAYAAKLSLSDDNP------------------DVFC------WNKKLSE 878
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
GD A+ F M D VT+L +++ + LELGK A GL +
Sbjct: 879 CLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSD 938
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V V N+L++MYSK G ARE+F + ++SW +MI+ CA + E+++LF L+
Sbjct: 939 VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 998
Query: 440 LDLRPNRVTFLAVLQACT 457
L+P+ T +VL+AC+
Sbjct: 999 EGLKPDHFTLASVLRACS 1016
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL + + L+ G+ H+ + G D + N L++MYSKCG + SAR +FD +R
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 310 RVSWTAMISGYA-----QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
V+W A++ YA G+ E L LF + A+ +T+ ++ C SG L
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ YA GL+ +V V AL+++YSKCG + DAR LF + E+ VV W M+ G
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
G EA LF + LRP+ + +L + + E W +Q
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQ 854
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 310/589 (52%), Gaps = 46/589 (7%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA----DFVTVMG 146
L+ A K+FDE+ + +WN ++ +A + V ++ + +V ++ + T
Sbjct: 81 LEYARKVFDEIPQPNSFTWNTLIRAYASGP--DPVCSIWAFLDMVSSESQCYPNKYTFPF 138
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L +AA LSL +S+H I V +DV V N+ I Y C DL A VF I+E+
Sbjct: 139 LIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK- 197
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
VVSWNSM+ G D +L ++ M + T+V +LS+ L GR V
Sbjct: 198 -DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRV 256
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA----- 321
S+ ++++++ N ++ MY+KCG I+ A+ LFD + ++ V+WT M+ GYA
Sbjct: 257 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 316
Query: 322 --------------------------QKGDLDEALRLFFAMEAAGELP-DLVTVLSMISG 354
Q G +EAL +F ++ + + +T++S +S
Sbjct: 317 EAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSA 376
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C Q GALELG+W +Y G+K N V +ALI MYSKCG + ARE+F ++ ++ V W
Sbjct: 377 CAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVW 436
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+ MI G A++G EA+D+F+++ E +++PN VTF V AC+HTG +++ ++
Sbjct: 437 SAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMES 496
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
GI PE HY+C+ D+LGR G L++A+ F+++MPI +WG LL ACKIH N+ +
Sbjct: 497 SYGIV--PEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSL 554
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
E L +LEP + +V ++N YA G+WD V+ +R M+ +KK PG S I+G
Sbjct: 555 AEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDG 614
Query: 595 KTCTFTAEDRYHAESELTY----PVLDCLALHSREEAYSSHLKWIPEHE 639
F + D H SE Y V++ L + E S L+ I E E
Sbjct: 615 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEE 663
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 220/472 (46%), Gaps = 52/472 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE--PNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WN+ IR + + ++ F M ++ + PN TFPF+ KA A++S L Q +HG
Sbjct: 99 WNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 158
Query: 80 IVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+KS + C LD A K+F + +DV SWN+M+ GF Q G +
Sbjct: 159 AIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 218
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L LF M ++A VT++G+ A + L + V S+ V+ ++++ N +
Sbjct: 219 LELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDM 278
Query: 186 YAKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMV 216
Y KC ++ A+ +F +EE+ + +V+WN+++
Sbjct: 279 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALI 338
Query: 217 AGCTYGDKFDDS-LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+ K +++ L F+ + +L+ T+VS LS+ AL GR +HS+ G
Sbjct: 339 SAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGI 398
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
++ V + LI MYSKCGD++ AR +F+ + R W+AMI G A G EA+ +F+
Sbjct: 399 KMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYK 458
Query: 336 MEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGL--KDNVMVCNALIDMYSK 392
M+ A P+ VT ++ C +G + E F S G+ +D C ++D+ +
Sbjct: 459 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYAC--IVDVLGR 516
Query: 393 CGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
G + A + A+P S W ++ C ++ A +L+EL+ R
Sbjct: 517 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPR 568
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 198/410 (48%), Gaps = 44/410 (10%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTW--ISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
L LK H+ I G+ +D + I++ + L+ A VF I + +WN+
Sbjct: 44 LRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQP--NSFTWNT 101
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRL--DVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
++ G S+ + M+ + + + T L+ + +L G+ +H I
Sbjct: 102 LIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIK 161
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
DV V N+LI Y CGD+DSA +F I ++ VSW +MI+G+ QKG D+AL L
Sbjct: 162 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 221
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F ME+ VT++ ++S C + LE G+ +Y + N+ + NA++DMY+K
Sbjct: 222 FKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTK 281
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCAL----------------------------- 423
CGSI DA+ LF A+ EK V+WTTM+ G A+
Sbjct: 282 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAY 341
Query: 424 --NGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGIS 479
NG+ EAL +FH+L ++ +++ N++T ++ L AC G LE G W S I+ + GI
Sbjct: 342 EQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKN--GIK 399
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
N + S + + + G L++A + S+ K D +W ++ +H
Sbjct: 400 MNFYVT--SALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMH 446
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 8/269 (2%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTL--ISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
+L Q + H+H I G D + L I+ S ++ AR +FD I +W +
Sbjct: 43 SLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTL 102
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
I YA D ++ F M ++ P+ T +I + +L LG+ A
Sbjct: 103 IRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKS 162
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
+ +V V N+LI Y CG + A ++F + EK VVSW +MI G G +AL+LF
Sbjct: 163 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 222
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++ D++ + VT + VL AC LE G + +++ N L + M D+
Sbjct: 223 KKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENR---VNVNLTLANAMLDMY 279
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ G +++A +M K D W T+L
Sbjct: 280 TKCGSIEDAKRLFDAMEEK-DNVTWTTML 307
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 48/250 (19%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + WNS I V K K L LF++M+ D++ +++T + ACAK+ DL + +
Sbjct: 195 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGR 254
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFD--------------------- 99
+ +I ++ + KC ++ A ++FD
Sbjct: 255 RVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 314
Query: 100 ----------EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLT 148
M +D+ +WNA++ + Q G L +F+ ++L I+ + +T++
Sbjct: 315 DYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTL 374
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
A L L + +HS+ G+ + V + I Y+KC DL+ A VF +E+ R
Sbjct: 375 SACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEK--RD 432
Query: 209 VVSWNSMVAG 218
V W++M+ G
Sbjct: 433 VFVWSAMIGG 442
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 299/570 (52%), Gaps = 18/570 (3%)
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYKI--FDEMAVRDVASWNAMLVGFAQMGFLENV 125
S LI S + H S ++ D Y + FD +A + WN ++ F+ + V
Sbjct: 29 SILITSGLAHHTFFLSDLLRSATKDLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMV 88
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG-----IHIGVDADVSVCN 180
L + +R G+ D T L +A S L++ + F + G+D D V N
Sbjct: 89 LVAYSRLRNHGVIPDRHTFPLLLKA------FSKLRNENPFQFYAHIVKFGLDFDAFVQN 142
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ +S++A C + + +F IE + VVSW +++ GC + ++L + M +G
Sbjct: 143 SLVSAFAHCGYVDCSRRLF--IETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGV 200
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSAR 299
+D TVVS+L + + GR VH + G + DV V + L+ MYSKCG D A
Sbjct: 201 EVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAV 260
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F+ + R VSW A+I+GY Q EAL++F M G P+ TV S ++ C Q G
Sbjct: 261 KVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLG 320
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+L+ G+W Y L N + AL+DMYSKCG + +A +F LP K V WT MI
Sbjct: 321 SLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMIN 380
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A+ G+ + +L+LF Q++ ++PN VTFL VL AC H G +++G + + D +
Sbjct: 381 GLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRL- 439
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P +DHY CM DLLGR G+L+EA+ F++SMP++ G+WG L C IH E+GE++
Sbjct: 440 -EPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIG 498
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L KL+PH + Y+ +AN Y+ +W+ AN+R +MK V K P S +NG F
Sbjct: 499 NHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIEVNGVIHEF 558
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYS 629
A D+ H ES Y +L + + Y+
Sbjct: 559 IAFDKSHIESINVYMMLGSVTAQLKLATYA 588
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 215/437 (49%), Gaps = 20/437 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ +R ++ L+ + +++ + + P+ TFP + KA +KL + Q + HIV
Sbjct: 72 WNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQ-FYAHIV 130
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S F C +DC+ ++F E A +DV SW A++ G + G L
Sbjct: 131 KFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALE 190
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSY 186
F MR G++ D VTV+ + AA + + + VH F + G V DV V + + Y
Sbjct: 191 CFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC A VF E R +VSW +++AG +++ ++L ++ M+ G + +T
Sbjct: 251 SKCGYCDDAVKVFN--EMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQST 308
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V S L++ +L QGR +H + L+ + L+ MYSKCG +D A ++F+ +
Sbjct: 309 VTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLP 368
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ WTAMI+G A +GD +L LF M + P+ VT L ++S C G ++ G +
Sbjct: 369 AKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLE 428
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
F C L+ NV ++D+ + G + +A + ++P E W + +GC ++
Sbjct: 429 LFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIH 488
Query: 425 GEFVEALDLFHQLMELD 441
F + + L++L
Sbjct: 489 KAFELGEHIGNHLIKLQ 505
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 194/631 (30%), Positives = 321/631 (50%), Gaps = 19/631 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V + + L F++M+ + ++PN+++F + CA + +HG ++
Sbjct: 246 WNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI 305
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S F KC L A KIFD M D +WN ++ G+ Q GF + +
Sbjct: 306 RSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVA 365
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G++ D +T + + + L K VHS+ + GV DV + + + Y
Sbjct: 366 LFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYF 425
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D++MA F + L V +M++G ++LN +R ++ G + T+
Sbjct: 426 KGGDVEMACKTF--QQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTM 483
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +L G+ +H + G + V +++ MY+K G +D A F +
Sbjct: 484 ASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV 543
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W MI ++Q G + A+ LF M +G D V++ + +S C AL GK
Sbjct: 544 KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL 603
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ + V + LIDMYSKCG + AR +F + K VSW ++IA +G
Sbjct: 604 HCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRP 663
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E LDLFH+++E ++P+ VTFL ++ AC H G +++G ++ GI ++H+
Sbjct: 664 RECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGIC--ARMEHF 721
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DL GR G+L EA D ++SMP DAG WG+LL AC++H N+E+ + + L +L+P
Sbjct: 722 ACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDP 781
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+++ YV ++N +A G W+ V +R++MK V+K PG S +NG T F+A D H
Sbjct: 782 NNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHP 841
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
+S Y +L L L R+ Y ++P H
Sbjct: 842 QSVEIYLILKNLLLELRKHGYVPQ-PYLPLH 871
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 241/524 (45%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WN IR L+ F +M +++ P+ TFP++ KAC L+++ +M+H
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELAR 204
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + + + A +FDE+ VRD WN ML G+ + G + L
Sbjct: 205 SMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALG 264
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F MR ++ + V+ + L + +H I G ++D +V NT I+ Y+
Sbjct: 265 TFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYS 324
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +L A +F + + V+WN ++AG D+++ ++ M+ +G +LD T
Sbjct: 325 KCGNLFDARKIFDIMPQ--TDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITF 382
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L S + +L + VHS+ + +G DV + + L+ +Y K GD++ A F
Sbjct: 383 ASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTL 442
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
TAMISGY G EAL LF + G +P+ +T+ S++ C +L+LGK
Sbjct: 443 VDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKEL 502
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
GL++ V +++ MY+K G + A + F +P K V W MI + NG+
Sbjct: 503 HCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKP 562
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
A+DLF Q+ + + V+ A L AC + L G + + IS D +
Sbjct: 563 ELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFIS-----DTF 617
Query: 488 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + GKL A M K++ W +++ A H
Sbjct: 618 VASTLIDMYSKCGKLALARSVFDMMDWKNEVS-WNSIIAAYGNH 660
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 214/443 (48%), Gaps = 10/443 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+V C +F + + WN ++ GF+ +G + L F+ M + D T
Sbjct: 121 YVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTF 180
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A ++ L K VH +G D+ + ++ I Y + A+ +F E
Sbjct: 181 PYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLF--DEL 238
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+R + WN M+ G F+ +L ++ M + + + + V LLS + G
Sbjct: 239 PVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGI 298
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H I GF+ D +V NT+I+MYSKCG++ AR +FD + V+W +I+GY Q G
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNG 358
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
DEA+ LF AM +G D +T S + +SG+L+ K +Y G+ +V + +
Sbjct: 359 FTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKS 418
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
AL+D+Y K G + A + F V T MI+G LNG VEAL+LF L++ + P
Sbjct: 419 ALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVP 478
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
N +T +VL AC L+ G + I++ KG+ ++ S + + + G+L
Sbjct: 479 NCLTMASVLPACAALASLKLGKELHCDILK---KGLENVCQVG--SSITYMYAKSGRLDL 533
Query: 503 ALDFVQSMPIKSDAGIWGTLLCA 525
A F + MP+K D+ W ++ +
Sbjct: 534 AYQFFRRMPVK-DSVCWNLMIVS 555
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 152/304 (50%), Gaps = 2/304 (0%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
++ +H+ + G++ +++ + + Y C K +FC ++ L + WN ++ G
Sbjct: 95 VRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQ--LCYSLPWNWLIRGF 152
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ FD +L F+ M+ + D T ++ + + ++VH GF +D+
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+ ++LI +Y+ G I A+ LFD + R + W M++GY + GD + AL F M +
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ V+ + ++S C G + G G + + V N +I MYSKCG++ DA
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDA 332
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
R++F +P+ V+W +IAG NG EA+ LF ++ ++ + +TF + L + +
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKS 392
Query: 460 GFLE 463
G L+
Sbjct: 393 GSLK 396
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
L+ R F +A+ + + + + CG +G+L LG
Sbjct: 74 AQLESMFRAFPNSDASLVKQQVRQIHAKVLVCGMNGSLTLG------------------- 114
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ ++ MY C S D LF L + W +I G ++ G F AL F +++ ++
Sbjct: 115 SRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVA 174
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
P++ TF V++AC G L ++ + + ++ +L S + L G + +A
Sbjct: 175 PDKYTFPYVIKAC---GGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDA 231
Query: 504 LDFVQSMPIKSDAGIWGTLL 523
+P++ D +W +L
Sbjct: 232 KYLFDELPVR-DCILWNVML 250
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 213/686 (31%), Positives = 330/686 (48%), Gaps = 81/686 (11%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L R+ S + WN +R + + + + + +M + +P++ T P+ KAC +L
Sbjct: 106 LERVVPSPAV-WWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPS 164
Query: 70 LIYSQMIHGHI----VKSPFVKCDRLDCAYK----------IFDEM---AVRDVASWNAM 112
HG I +S C+ L Y +FDE+ + DV SWN++
Sbjct: 165 YRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSI 224
Query: 113 LVGFAQMGFLENVLRLFYNM------RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+ + L LF M + ++D ++++ + A K L K +HS+
Sbjct: 225 VAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSY 284
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I G AD VCN I +YAKC +K A VF +E + VVSWN+MV G T KF
Sbjct: 285 AIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVME--FKDVVSWNAMVTGYTQSGKFG 342
Query: 227 DSLNFYRHMMYNGFRLDV-----------------------------------TTVVSLL 251
+ +++M LDV T++SLL
Sbjct: 343 AAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLL 402
Query: 252 SSFVCPEALVQGRLVHSHGIH------------YGFDLDVSVINTLISMYSKCGDIDSAR 299
S+ AL QG H++ + G D+ V N LI MYSKC +AR
Sbjct: 403 SACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAAR 462
Query: 300 VLFDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGC 355
+F+ I R R V+WT MI GYAQ GD ++AL+LF M + P+ T+ ++ C
Sbjct: 463 TIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMAC 522
Query: 356 GQSGALELGKWFDNYACSGGLKDNVM--VCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
+L +GK Y ++ + V N LIDMYSKCG + AR +F ++P++ VS
Sbjct: 523 AHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVS 582
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
WT+M++G ++G EALD+F ++ + P+ ++FL +L AC+H+G +++G I
Sbjct: 583 WTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMR 642
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
D G+ + + HY+C+ DLL R G+L +A +Q MP++ A IW LL AC++H N+E
Sbjct: 643 SDYGVIASAQ--HYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVE 700
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+ EY L ++ + Y ++N YA RW VA IR +MK++ +KK PG S
Sbjct: 701 LAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGK 760
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCL 619
T +F DR H S Y +L+ L
Sbjct: 761 KGTASFFVGDRSHPLSPEIYSLLERL 786
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 17/250 (6%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+++ Y CG A + + + V W ++ + ++G LD A+ + M AG PD
Sbjct: 89 VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ + CG+ + G F C G + NV VCNAL+ MYS+ GS+ DA +F
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208
Query: 405 ALPEK---IVVSWTTMIAGCALNGEFVEALDLFHQLMEL------DLRPNRVTFLAVLQA 455
+ K V+SW +++A ALDLF ++ + + R + ++ + +L A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPA 268
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIK 513
C L + I I D + C A D + G +K+A++ M K
Sbjct: 269 CASLKALPQTKEI-----HSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK 323
Query: 514 SDAGIWGTLL 523
D W ++
Sbjct: 324 -DVVSWNAMV 332
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/612 (31%), Positives = 310/612 (50%), Gaps = 18/612 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V + + L LF++M+ + + + + ++CA LS L + +H H +
Sbjct: 250 WSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHAL 309
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KC R+ A K+ M + S+NA++VG+A+ L+
Sbjct: 310 KSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALK 369
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F + G+ D +T+ G A + + VH + +++ V N + Y
Sbjct: 370 SFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYG 429
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A +F +E R VSWN+++A C +++L + M+++ D T
Sbjct: 430 KCKALAEASDLFDMMERR--DAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTY 487
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +AL G +H+ I G D V L+ MY KCG I+ A + D
Sbjct: 488 GSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQ 547
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+T VSW A+ISG++ ++A + F M G PD T +++ C + LGK
Sbjct: 548 KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQI 607
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
L+ +V +C+ L+DMYSKCG++ D++ +F P + V+W M+ G A +G
Sbjct: 608 HAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLG 667
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EAL LF + ++++PN TF++VL+AC H G ++KG + + G+ +P+ +HY
Sbjct: 668 EEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGL--DPQSEHY 725
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SCM D+LGR G++ EAL+ VQ MP ++DA IW LL CKIH N+E+ E L +L+P
Sbjct: 726 SCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDP 785
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ V ++N YA G W V+ +R MM+ N++KK PG S + + F D+ H
Sbjct: 786 QDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHP 845
Query: 608 ESELTYPVLDCL 619
E Y L L
Sbjct: 846 RDEEIYEKLGVL 857
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 233/524 (44%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + E K++ +F +M + + + + + KAC L + +HG +V
Sbjct: 149 WNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVV 208
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F KC RLD + +F E+ ++ SW+AM+ G Q L
Sbjct: 209 KFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLE 268
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ VG+ L ++ L L K +HS + +D+ V + YA
Sbjct: 269 LFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYA 328
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A+ V + + ++ S+N+++ G D+ +L ++ ++ G D T+
Sbjct: 329 KCGRMADAQKVLSSMPK--CSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITL 386
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
L++ ++GR VH + ++ V N ++ MY KC + A LFD +
Sbjct: 387 SGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMER 446
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ Q G+ +E L F +M + PD T S++ C AL G
Sbjct: 447 RDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEI 506
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G+ + V AL+DMY KCG I A ++ +K +VSW +I+G +L +
Sbjct: 507 HTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQS 566
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+A F +++E+ + P+ T+ AVL C + + G I + I + D Y
Sbjct: 567 EDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHA-----QIIKQELQSDVY 621
Query: 488 SC--MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
C + D+ + G ++++ + P + D W +LC H
Sbjct: 622 ICSTLVDMYSKCGNMQDSQLMFEKAPNR-DFVTWNAMLCGYAHH 664
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 193/411 (46%), Gaps = 4/411 (0%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++ AC + ++ + + S + C +D A K F EM RDV SWN+++ GF Q
Sbjct: 99 YLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQ 158
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G + +F M G+ D ++ + +A + + VH + G D DV
Sbjct: 159 NGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVT 218
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ + YAKC L + VF + E + VSW++M+AGC D+ + L ++ M
Sbjct: 219 GSALLGMYAKCKRLDDSLSVFSELPE--KNWVSWSAMIAGCVQNDRNVEGLELFKEMQGV 276
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + + SL S AL G+ +HSH + F D+ V + MY+KCG + A
Sbjct: 277 GVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADA 336
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ- 357
+ + + + S+ A+I GYA+ +AL+ F + G D +T+ ++ C
Sbjct: 337 QKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASI 396
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G LE G+ A N+ V NA++DMY KC ++ +A +LF + + VSW +
Sbjct: 397 RGDLE-GRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAI 455
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
IA C NG E L F ++ + P+ T+ +VL+AC L G I
Sbjct: 456 IAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEI 506
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 209/449 (46%), Gaps = 18/449 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ +N+ I + + L F+ + + + + +T ACA + + + +H
Sbjct: 347 SLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVH 406
Query: 78 GHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G VKS + KC L A +FD M RD SWNA++ Q G E
Sbjct: 407 GLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEE 466
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F +M ++ D T + +A + L+ +H+ I G+ D V +
Sbjct: 467 ETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALV 526
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y KC ++ A+ + E+ +T+VSWN++++G + + +D+ F+ M+ G D
Sbjct: 527 DMYCKCGMIEKADKIHDRTEQ--KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPD 584
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T ++L + + G+ +H+ I DV + +TL+ MYSKCG++ ++++F+
Sbjct: 585 NFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFE 644
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+R V+W AM+ GYA G +EAL+LF +M+ P+ T +S++ C G ++
Sbjct: 645 KAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDK 704
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
G +FD GL + ++D+ + G I +A L +P E V W +++ C
Sbjct: 705 GLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVC 764
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFL 450
++G A L++LD + + L
Sbjct: 765 KIHGNVEVAEKATRALLQLDPQDSSACVL 793
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 180/380 (47%), Gaps = 18/380 (4%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
DV N+ IS YA C ++ +A F + ER VVSWNS+++G + S++ +
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPER--DVVSWNSVISGFLQNGECRKSIDVFLE 171
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M G D ++ +L + E G VH + +GFD DV + L+ MY+KC
Sbjct: 172 MGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKR 231
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D + +F + ++ VSW+AMI+G Q E L LF M+ G S+
Sbjct: 232 LDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRS 291
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C AL LGK ++A +++V A +DMY+KCG + DA+++ ++P+ + S+
Sbjct: 292 CAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSY 351
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT-GFLE----KGWAIS 469
+I G A + +AL F L++ L + +T L AC G LE G A+
Sbjct: 352 NAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVK 411
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
I + ++ N LD Y G+ L EA D M + DA W ++ AC+ +
Sbjct: 412 SISMSNICVA-NAILDMY-------GKCKALAEASDLFDMME-RRDAVSWNAIIAACEQN 462
Query: 530 LNIE--IGEYVAYCLFKLEP 547
N E + + + ++EP
Sbjct: 463 GNEEETLAHFASMIHSRMEP 482
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 205/635 (32%), Positives = 325/635 (51%), Gaps = 37/635 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ W I + + ++++ QM ++ P+ LTF I KAC D+ +H
Sbjct: 145 SVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLH 204
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
GH++KS + K ++ A +F ++ +D+ SW +M+ GF Q+G+
Sbjct: 205 GHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEI 264
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS---------VHSFGIHIGVDA 174
L LF +M G+ + G +A SLLK FG+ V A
Sbjct: 265 EALYLFRDMFRQGVYQPNEFIFGSVFSACR----SLLKPEFGRQIQGMCAKFGLGRNVFA 320
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
S+C+ YAK L A+ F IE +VSWN+++A D ++++ F+
Sbjct: 321 GCSLCDM----YAKFGFLPSAKRAFYQIESP--DLVSWNAIIAALANSD-VNEAIYFFCQ 373
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M++ G D T ++LL + P L QG +HS+ I G D +V N+L++MY+KC +
Sbjct: 374 MIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSN 433
Query: 295 IDSARVLFDGICDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+ A +F I + VSW A++S +Q EA RLF M + PD +T+ +++
Sbjct: 434 LHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILG 493
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C + +LE+G ++ GL +V V N LIDMY+KCG + AR +F + +VS
Sbjct: 494 TCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVS 553
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W+++I G A G EAL+LF + L ++PN VT+L VL AC+H G +E+GW +
Sbjct: 554 WSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTME 613
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ GI P +H SCM DLL R G L EA +F++ D +W TLL +CK H N++
Sbjct: 614 IELGIP--PTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVD 671
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
I E A + KL+P ++A V ++N +A G W VA +R +MK+ V+K PGQS +
Sbjct: 672 IAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVK 731
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ F +ED H + Y +L+ L L ++ Y
Sbjct: 732 DQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGY 766
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 206/463 (44%), Gaps = 26/463 (5%)
Query: 23 NSQIREAVNKNEAHKTLLLFR-QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
NS I + + L F +K + I+ T+ + AC + L Y + IH HI+
Sbjct: 48 NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC L A K FD M +R V SW M+ G++Q G + +
Sbjct: 108 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII 167
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
++ M G D +T + +A A + L +H I G D + N IS Y
Sbjct: 168 MYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYT 227
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF----RLD 243
K + A VF I + ++SW SM+ G T ++L +R M G
Sbjct: 228 KFGQIAHASDVFTMIST--KDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFI 285
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+V S S + PE GR + +G +V +L MY+K G + SA+ F
Sbjct: 286 FGSVFSACRSLLKPEF---GRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFY 342
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I VSW A+I+ A D++EA+ F M G +PD +T L+++ CG L
Sbjct: 343 QIESPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQ 401
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-IVVSWTTMIAGCA 422
G +Y GL VCN+L+ MY+KC ++ DA +F + E +VSW +++ C+
Sbjct: 402 GMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACS 461
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + EA LF ++ + +P+ +T +L C LE G
Sbjct: 462 QHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVG 504
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 200/433 (46%), Gaps = 19/433 (4%)
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q + E + ++++ IQ + T + L A + + L K +H + D+
Sbjct: 57 QQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLV 116
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ N ++ Y KC LK A F ++ LR+VVSW M++G + + +D++ Y M+
Sbjct: 117 LQNHILNMYGKCGSLKDARKAFDTMQ--LRSVVSWTIMISGYSQNGQENDAIIMYIQMLR 174
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+G+ D T S++ + + G +H H I G+D + N LISMY+K G I
Sbjct: 175 SGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAH 234
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCG 356
A +F I + +SW +MI+G+ Q G EAL LF M G P+ S+ S C
Sbjct: 235 ASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACR 294
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
E G+ GL NV +L DMY+K G + A+ FY + +VSW
Sbjct: 295 SLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNA 354
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQ-- 472
+IA A N + EA+ F Q++ + L P+ +TFL +L AC L +G I II+
Sbjct: 355 IIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMG 413
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
D N L Y+ + L +A + + + + W +L AC H
Sbjct: 414 LDKVAAVCNSLLTMYT-------KCSNLHDAFNVFKDISENGNLVSWNAILSACSQHK-- 464
Query: 533 EIGEYVAYCLFKL 545
+ GE A+ LFKL
Sbjct: 465 QPGE--AFRLFKL 475
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I + + WN+ + + + LF+ M ++ +P+N+T I CA+L L
Sbjct: 444 ISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEV 503
Query: 73 SQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+H VKS V KC L A +FD D+ SW++++VG+AQ
Sbjct: 504 GNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQ 563
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
G + L LF MR +G+Q + VT +G+ A H
Sbjct: 564 FGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSH 598
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 206/626 (32%), Positives = 311/626 (49%), Gaps = 29/626 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + + +L LF QMK+ + P+ + AC L L + IH +++
Sbjct: 210 WTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVL 269
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S V KC ++ K+FD M ++V SW ++ G Q F + L
Sbjct: 270 RSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALD 329
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M +G D + + L + VH++ I + +D D V N I YA
Sbjct: 330 LFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 389
Query: 188 KCDDLKMAELVF---CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
KCD L A VF I+ +VS+N+M+ G + DK ++L+ +R M + +
Sbjct: 390 KCDSLTDARKVFNLMAAID-----LVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTL 444
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
VSLL L +H I YG LD + LI +YSKC + AR++F+
Sbjct: 445 LIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEE 504
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I D+ V WTAM SGY Q+ + +E+L+L+ ++ + P+ T ++I+ +L G
Sbjct: 505 IQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHG 564
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ F N G D+ V N L+DMY+K GSI +A + F + K W +MIA A +
Sbjct: 565 QQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQH 624
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA--ISIIQYDDKGISYNP 482
GE +AL +F ++ L+PN VTF+ VL AC+HTG L+ G+ S+ Q+ GI P
Sbjct: 625 GEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQF---GIE--P 679
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
++HY CM LLGR GKL EA +F++ MPIK A +W +LL AC++ N+E+G Y A
Sbjct: 680 GIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMA 739
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
P + YV ++N +A G W V +R M + V K PG S +N + F A+
Sbjct: 740 ISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAK 799
Query: 603 DRYHAESELTYPVLDCLALHSREEAY 628
D H +S VLD L L + Y
Sbjct: 800 DTAHRDSAPISLVLDNLLLQIKGFGY 825
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/525 (28%), Positives = 251/525 (47%), Gaps = 25/525 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQ-MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W+S + + + + L+LF Q M+ + +PN + +AC + L + IHG +
Sbjct: 108 WSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLV 167
Query: 81 VKSPFVK----CDRL----------DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK +V+ C L D A +FD + V+ +W ++ G+++ G + L
Sbjct: 168 VKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSL 227
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+LF M+ + D + + A + K L K +H + + G+ DVS+ N +I Y
Sbjct: 228 KLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFY 287
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC +++ +F + + + VVSW +++AGC D+L+ + M G+ D
Sbjct: 288 FKCHKVQLGRKLFDRMVD--KNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFG 345
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+L+S AL +GR VH++ I D D V N LI MY+KC + AR +F+ +
Sbjct: 346 CTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMA 405
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
VS+ AMI GY+++ L EAL LF M + P L+ +S++ LEL
Sbjct: 406 AIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ 465
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G+ + +ALID+YSKC +GDAR +F + +K +V WT M +G E
Sbjct: 466 IHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSE 525
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
E+L L+ L L+PN TF AV+ A ++ L G Q+ ++ I + D
Sbjct: 526 NEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQ-----QFHNQVIKMGFDDDP 580
Query: 487 Y--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + + D+ + G ++EA S K D W +++ H
Sbjct: 581 FVANTLVDMYAKSGSIEEAHKAFISTNWK-DTACWNSMIATYAQH 624
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 215/445 (48%), Gaps = 17/445 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVT 143
+ K + ++ A K+FD M+ +++ +W++M+ + L LF MR + +
Sbjct: 84 YSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYI 143
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + +A L+ +H + G DV VC + I Y K + A L+F G++
Sbjct: 144 LASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQ 203
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
++T +W +++AG + + SL + M D + S+LS+ + + L G
Sbjct: 204 --VKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGG 261
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ +H + + G +DVS++N I Y KC + R LFD + D+ VSWT +I+G Q
Sbjct: 262 KQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQN 321
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+AL LF M G PD S+++ CG ALE G+ YA + ++ V
Sbjct: 322 SFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVK 381
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL- 442
N LIDMY+KC S+ DAR++F + +VS+ MI G + + EALDLF + M L L
Sbjct: 382 NGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFRE-MRLSLS 440
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHY--SCMADLLGRKG 498
P + F+++L LE I II+Y G+S LD + S + D+ +
Sbjct: 441 SPTLLIFVSLLGVSASLYHLELSNQIHGLIIKY---GVS----LDEFAGSALIDVYSKCS 493
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLL 523
++ +A + + K D +W +
Sbjct: 494 RVGDARLVFEEIQDK-DIVVWTAMF 517
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 293/553 (52%), Gaps = 14/553 (2%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
R+D A K+FD + D WN +L G + +E+ R+ + ++ D T+ +
Sbjct: 164 RVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDG---SVRPDATTLASVLP 220
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
AA +++ + VHSF G+ V IS Y+KC D++ A +F +E+ +
Sbjct: 221 AAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKP--DL 278
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V++N++++G + S+N + +M G + +T+V+L+ + + +H
Sbjct: 279 VAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGF 338
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ GF + V + +++ + D++SAR FD + ++T SW AMISGYAQ G + A
Sbjct: 339 VLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMA 398
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+ LF M P+ +T+ S +S C Q GAL LGKW L+ NV V ALIDM
Sbjct: 399 VALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDM 458
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y+KCGSI +AR +F + K VVSW MIAG L+G+ EAL L+ +++ L P TF
Sbjct: 459 YAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATF 518
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
L+VL AC+H G +E+GW + DD I NP ++H +CM DLLGR G+LKEA + +
Sbjct: 519 LSVLYACSHGGLVEEGWKVFRSMTDDYAI--NPGIEHCTCMVDLLGRAGQLKEAFELISE 576
Query: 510 MPIKS-DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
P + G+WG LL AC +H + ++ + + LF+L+P ++ YV ++N + ++
Sbjct: 577 FPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSE 636
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
A +R K ++ K PG +L I K F A DR H +SE Y L+ L E Y
Sbjct: 637 AAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGY 696
Query: 629 SSHLKWIPEHEAG 641
PE EA
Sbjct: 697 R------PETEAA 703
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 211/441 (47%), Gaps = 30/441 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
WN+ + ++ +EA ++ R + + P+ T + A A+++D+ + +H
Sbjct: 183 WNTLL-AGLSGSEAVESFA--RMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAE 239
Query: 79 --------HIVK---SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
H++ S + KC ++ A +FD M D+ ++NA++ G++ G + + +
Sbjct: 240 KCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVN 299
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + +G+ + T++ L H L + +H F + G A+ V + +
Sbjct: 300 LFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHC 359
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ +D++ A F + E +T+ SWN+M++G + ++ + M+ R + T+
Sbjct: 360 RLNDMESARKAFDTMPE--KTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITI 417
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S LS+ AL G+ +H + +V V+ LI MY+KCG I AR +F+ + +
Sbjct: 418 SSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDN 477
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
+ VSW AMI+GY G EAL+L+ M A LP T LS++ C G +E G K
Sbjct: 478 KNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKV 537
Query: 367 F----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS--WTTMIAG 420
F D+YA + G++ C ++D+ + G + +A EL P+ V W ++
Sbjct: 538 FRSMTDDYAINPGIEH----CTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGA 593
Query: 421 CALNGEFVEALDLFHQLMELD 441
C ++ + A +L ELD
Sbjct: 594 CMVHKDSDLAKLASQKLFELD 614
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D V + L +Y +D AR +FD + V W +++G + EA+ F M
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSG----SEAVESFARMV 203
Query: 338 AAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G + PD T+ S++ + + +G+ ++A GL ++ V LI +YSKCG +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
AR LF + + +V++ +I+G ++NG +++LF +LM L L PN T +A++
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIP-- 321
Query: 457 THTGF 461
H+ F
Sbjct: 322 VHSPF 326
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN+ I + LF QM + ++ PN +T ACA+L L + +H
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLH 437
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I + + KC + A +IF+ M ++V SWNAM+ G+ G
Sbjct: 438 RIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGA 497
Query: 124 NVLRLFYNM---RLVGIQADFVTVM 145
L+L+ +M L+ A F++V+
Sbjct: 498 EALKLYKDMLDAHLLPTSATFLSVL 522
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 295/535 (55%), Gaps = 17/535 (3%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+V SWN+++ A+ G LR F +MR + ++ + T ++ L + H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ G + D+ V + + Y+KC +L+ A +F I R +VSW SM+ G D
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR--NIVSWTSMITGYVQNDD 233
Query: 225 FDDSLNFYRHMMYNGFR--------LDVTTVVSLLS--SFVCPEALVQGRLVHSHGIHYG 274
+L ++ + +D +VS+LS S V +++ +G VH I G
Sbjct: 234 AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG--VHGFLIKRG 291
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
F+ D+ V NTL+ Y+KCG++ +R +FDG+ +R +SW ++I+ YAQ G E++ +F
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351
Query: 335 AMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M GE+ + VT+ +++ C SG+ LGK + GL+ NV V ++IDMY KC
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 411
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR+ F + EK V SW+ M+AG ++G EAL++F+++ ++PN +TF++VL
Sbjct: 412 GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G LE+GW + P ++HY CM DLLGR G LKEA D ++ M ++
Sbjct: 472 AACSHAGLLEEGW--HWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLR 529
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
D +WG LL AC++H N+++GE A LF+L+P + YV ++N YA GRW+ V +R
Sbjct: 530 PDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMR 589
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+MK + + K PG SL I G+ F DR H + E Y L+ L++ +E Y
Sbjct: 590 ILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 644
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 219/464 (47%), Gaps = 31/464 (6%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L N+ + + WNS I E ++ + L F M++ ++PN TFP K+C
Sbjct: 103 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 162
Query: 65 AKLSDLIYSQMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWN 110
+ L DL + H V S V KC L A +FDE++ R++ SW
Sbjct: 163 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 222
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLV--------GIQADFVTVMGLTQAAIHAKHLSLLKS 162
+M+ G+ Q L LF + + D + ++ + A S+ +
Sbjct: 223 SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH F I G + D+ V NT + +YAKC +L ++ VF G+ E R V+SWNS++A
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAE--RDVISWNSIIAVYAQN 340
Query: 223 DKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+S+ + M+ +G + T+ ++L + + G+ +H I G + +V V
Sbjct: 341 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 400
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
++I MY KCG ++ AR FD + ++ SW+AM++GY G EAL +F+ M AG
Sbjct: 401 GTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGV 460
Query: 342 LPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
P+ +T +S+++ C +G LE G WF + ++ V ++D+ + G + +A
Sbjct: 461 KPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAF 520
Query: 401 ELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+L + P+ +V W ++ C ++ +L ELD
Sbjct: 521 DLIKGMKLRPDFVV--WGALLGACRMHKNVDLGEISARKLFELD 562
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 320/637 (50%), Gaps = 39/637 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTL----LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
I WNS I V + H+ + LF + P+ TFP I KAC L D
Sbjct: 84 NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---G 140
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H + K F + LD A+K+F +M V+DV SWNAM+ GF Q
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G L + M+ G++ D +TV + + + +H + G+D+DV V
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVS 260
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I+ Y+K L+ A++VF +E +R +VSWNS++A + +L F++ M G
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQME--VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-------DLDVSVINTLISMYSKC 292
R D+ TVVSL S F L R+ S GF D DV + N L++MY+K
Sbjct: 319 IRPDLLTVVSLTSIF---SQLSDQRISRSI---LGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LPDLVTVLSM 351
G ++ A +FD + + +SW +++GY Q G EA+ + ME + +P+ T +S+
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSI 432
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
I GAL+ G L +V V LID+Y KCG + DA LFY +P
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
V W +IA ++G EAL LF ++ ++ + +TF+++L AC+H+G +++G I
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDI 552
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
+ GI P L HY CM DLLGR G L++A + V++MPI+ DA IWG LL ACKI+ N
Sbjct: 553 MQKEYGI--KPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGN 610
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
E+G + L +++ + YV ++N YA +W+GV +R++ + ++K PG S
Sbjct: 611 AELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVV 670
Query: 592 INGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ K F ++ H + Y L L+ + Y
Sbjct: 671 VGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGY 707
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 229/442 (51%), Gaps = 23/442 (5%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLE---NVLRLFYNMRLVG-IQADFVTVMGLTQAAIH 153
FD + +++ SWN+++ + + G N + ++M G ++ DF T + +A +
Sbjct: 77 FDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV- 135
Query: 154 AKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
SL+ K VH +G + DV V + + Y++ L +A VF ++ ++ V S
Sbjct: 136 ----SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVF--VDMPVKDVGS 189
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+M++G +L M G ++D TV S+L + ++ G L+H H +
Sbjct: 190 WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL 249
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
+G D DV V N LI+MYSK G + A+++FD + R VSW ++I+ Y Q D ALR
Sbjct: 250 KHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALR 309
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALIDMY 390
F M+ G PDL+TV+S+ S Q + + + L +V++ NAL++MY
Sbjct: 310 FFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMY 369
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTF 449
+K G + A +F LP K +SW T++ G NG EA+D ++ + E D PN+ T+
Sbjct: 370 AKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTW 429
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFV 507
++++ A +H G L++G I K I + LD + +C+ DL G+ G+L++A+
Sbjct: 430 VSIIPAYSHVGALQQGMKIHA-----KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLF 484
Query: 508 QSMPIKSDAGIWGTLLCACKIH 529
+P + + W ++ + IH
Sbjct: 485 YEIP-RDTSVPWNAIIASLGIH 505
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 148/296 (50%), Gaps = 9/296 (3%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
K +H+ + G ++ + I+ Y D+ ++ F I ++ + SWNS+++
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKK--NIFSWNSIISAYV 96
Query: 221 YGDKFDDSLNFYRHM--MYNG--FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
K+ +++N + M G R D T +L + V +LV G+ VH GF+
Sbjct: 97 RFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFE 153
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
DV V +L+ +YS+ G +D A +F + + SW AMISG+ Q G+ AL + M
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G D +TV S++ C QS + G + GL +V V NALI+MYSK G +
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRL 273
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
DA+ +F + + +VSW ++IA N + AL F + +RP+ +T +++
Sbjct: 274 QDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 302/563 (53%), Gaps = 9/563 (1%)
Query: 63 ACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
ACA L+ + +++ R+ AY+ FDEM RDV +WNAML G +
Sbjct: 92 ACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARA 151
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ LF M + G+ D VTV + + +L ++H + + G+D ++ VCN
Sbjct: 152 AEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAM 211
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I Y K L+ VF G+ R +V+WNS+++G G + ++ + M +G
Sbjct: 212 IDVYGKLGMLEEVRKVFDGMSSR--DLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSP 269
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVL 301
DV T++SL S+ + GR VH + + G+D+ D+ N ++ MY+K I++A+ +
Sbjct: 270 DVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRM 329
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-AGELPDLVTVLSMISGCGQSGA 360
FD + R VSW +I+GY Q G EA+ ++ M+ G P T +S++ GA
Sbjct: 330 FDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGA 389
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ G + GL +V V +ID+Y+KCG + +A LF P + W +I+G
Sbjct: 390 LQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISG 449
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
++G +AL LF Q+ + + P+ VTF+++L AC+H G +++G + GI
Sbjct: 450 VGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGI-- 507
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P HY+CM D+ GR G+L +A DF+++MPIK D+ IWG LL AC+IH N+E+G+ +
Sbjct: 508 KPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQ 567
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
LF+L+P + YV M+N YA G+WDGV +R++++R ++K PG S + F
Sbjct: 568 NLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFY 627
Query: 601 AEDR---YHAESELTYPVLDCLA 620
+ ++ + E+ +LD LA
Sbjct: 628 SGNQMNIHPQHEEIQRELLDLLA 650
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 311/618 (50%), Gaps = 56/618 (9%)
Query: 60 IAKACAKLSDL--IYSQMIHGHIVKSPFVKCD-----------RLDCAYKIFDEMAVRDV 106
+ K C ++ L I+SQ I ++ +P V ++ A +FD M +
Sbjct: 25 LIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNH 84
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
WN M+ G++++G + + ++ M G+ D T L + + + +H
Sbjct: 85 FVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDH 144
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ +G ++V V N I Y+ ++ +A VF VV+WN M++G +FD
Sbjct: 145 IVKLGFSSNVFVQNALIHLYSLSGEVSVARGVF--DRSSKGDVVTWNVMISGYNRSKQFD 202
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI---- 282
+S+ + M T+VS+LS+ + L G+ VH Y DL + +
Sbjct: 203 ESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH----RYVKDLKIEPVRVLE 258
Query: 283 NTLISMYSKCGDIDSA-------------------------------RVLFDGICDRTRV 311
N LI MY+ CGD+D+A R FD + +R V
Sbjct: 259 NALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFV 318
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SWTAMI GY Q E L LF M+AA PD T++S+++ C GALELG+W Y
Sbjct: 319 SWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYI 378
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
+K + V NALIDMY CG++ A +F A+P + +SWT +I G A+NG EAL
Sbjct: 379 DKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEAL 438
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
D+F Q+++ + P+ VT + VL ACTH+G ++KG GI P + HY CM
Sbjct: 439 DMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIE--PNVAHYGCMV 496
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAA 551
DLLGR G LKEA + +++MP+K ++ +WG+LL AC++H + E+ E A + +LEP + A
Sbjct: 497 DLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGA 556
Query: 552 PYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESEL 611
YV + N YA RW+ + +R +M +KK PG SL +NG F A D+ H +S+
Sbjct: 557 VYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKE 616
Query: 612 TYPVLDCLALHSREEAYS 629
Y LD +++ + YS
Sbjct: 617 IYSKLDEMSVDLKFAGYS 634
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 223/508 (43%), Gaps = 51/508 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I+ + + ++ +M + + P+ T+PF+ K + + + + +H HIV
Sbjct: 87 WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIV 146
Query: 82 KSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F + A +FD + DV +WN M+ G+ + + ++
Sbjct: 147 KLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMK 206
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + + +T++ + A K L++ K VH + + ++ + N I YA
Sbjct: 207 LFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYA 266
Query: 188 KCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVAG 218
C D+ A +F ++ R R VSW +M+ G
Sbjct: 267 ACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDG 326
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++F + L+ +R M + D T+VS+L++ AL G + ++ +D
Sbjct: 327 YLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKID 386
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V N LI MY CG+++ A +F+ + R ++SWTA+I G A G +EAL +F M
Sbjct: 387 SFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLK 446
Query: 339 AGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
A PD VT + ++ C SG ++ G K+F G++ NV ++D+ + G +
Sbjct: 447 ASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLK 506
Query: 398 DARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL--AVLQ 454
+A E+ +P K + W +++ C ++ + A Q++EL+ V L +
Sbjct: 507 EAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYA 566
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNP 482
AC L + + + D+GI P
Sbjct: 567 ACNRWEKLHEVRKLMM----DRGIKKTP 590
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 320/637 (50%), Gaps = 39/637 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTL----LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
I WNS I V + H+ + LF + P+ TFP I KAC L D
Sbjct: 84 NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---G 140
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H + K F + LD A+K+F +M V+DV SWNAM+ GF Q
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G L + M+ G++ D +TV + + + +H + G+D+DV V
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVS 260
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I+ Y+K L+ A++VF +E +R +VSWNS++A + +L F++ M G
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQME--VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-------DLDVSVINTLISMYSKC 292
R D+ TVVSL S F L R+ S GF D DV + N L++MY+K
Sbjct: 319 IRPDLLTVVSLTSIF---SQLSDQRISRSI---LGFVIRREWLDKDVVIGNALVNMYAKL 372
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LPDLVTVLSM 351
G ++ A +FD + + +SW +++GY Q G EA+ + ME + +P+ T +S+
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSI 432
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
I GAL+ G L +V V LID+Y KCG + DA LFY +P
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
V W +IA ++G EAL LF ++ ++ + +TF+++L AC+H+G +++G I
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDI 552
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
+ GI P L HY CM DLLGR G L++A + V++MPI+ DA IWG LL ACKI+ N
Sbjct: 553 MQKEYGI--KPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGN 610
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
E+G + L +++ + YV ++N YA +W+GV +R++ + ++K PG S
Sbjct: 611 AELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVV 670
Query: 592 INGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ K F ++ H + Y L L+ + Y
Sbjct: 671 VGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGY 707
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 229/442 (51%), Gaps = 23/442 (5%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLE---NVLRLFYNMRLVG-IQADFVTVMGLTQAAIH 153
FD + +++ SWN+++ + + G N + ++M G ++ DF T + +A +
Sbjct: 77 FDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV- 135
Query: 154 AKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
SL+ K VH +G + DV V + + Y++ L +A VF ++ ++ V S
Sbjct: 136 ----SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVF--VDMPVKDVGS 189
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+M++G +L M G ++D TV S+L + ++ G L+H H +
Sbjct: 190 WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL 249
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
+G D DV V N LI+MYSK G + A+++FD + R VSW ++I+ Y Q D ALR
Sbjct: 250 KHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALR 309
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALIDMY 390
F M+ G PDL+TV+S+ S Q + + + L +V++ NAL++MY
Sbjct: 310 FFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMY 369
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTF 449
+K G + A +F LP K +SW T++ G NG EA+D ++ + E D PN+ T+
Sbjct: 370 AKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTW 429
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFV 507
++++ A +H G L++G I K I + LD + +C+ DL G+ G+L++A+
Sbjct: 430 VSIIPAYSHVGALQQGMKIHA-----KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLF 484
Query: 508 QSMPIKSDAGIWGTLLCACKIH 529
+P + + W ++ + IH
Sbjct: 485 YEIP-RDTSVPWNAIIASLGIH 505
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 148/296 (50%), Gaps = 9/296 (3%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
K +H+ + G ++ + I+ Y D+ ++ F I ++ + SWNS+++
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKK--NIFSWNSIISAYV 96
Query: 221 YGDKFDDSLNFYRHM--MYNG--FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
K+ +++N + M G R D T +L + V +LV G+ VH GF+
Sbjct: 97 RFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFE 153
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
DV V +L+ +YS+ G +D A +F + + SW AMISG+ Q G+ AL + M
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G D +TV S++ C QS + G + GL +V V NALI+MYSK G +
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRL 273
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
DA+ +F + + +VSW ++IA N + AL F + +RP+ +T +++
Sbjct: 274 QDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 306/604 (50%), Gaps = 19/604 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ QWN ++ A + + + LF M+ I N F + A A L D Y + IH
Sbjct: 55 VQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHA 114
Query: 79 HIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ K F +K ++ ++ F M + ++AS N +L GF +
Sbjct: 115 CVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQ 174
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
R+ + + G + + T + + + L+ K++H I G++ D + N+ ++
Sbjct: 175 GPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVN 234
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC A VF I ER VVSW +++ G + + L + M+ GF ++
Sbjct: 235 VYAKCGSANYACKVFGEIPER--DVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNM 291
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T +S+L S + G+ VH+ + D + V L+ MY+K ++ A +F+
Sbjct: 292 YTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNR 351
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R +WT +++GYAQ G ++A++ F M+ G P+ T+ S +SGC + L+ G
Sbjct: 352 LIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 411
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ + A G ++ V +AL+DMY+KCG + DA +F L + VSW T+I G + +
Sbjct: 412 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 471
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G+ +AL F +++ P+ VTF+ VL AC+H G +E+G GI+ P +
Sbjct: 472 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGIT--PTI 529
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+CM D+LGR GK E F++ M + S+ IW T+L ACK+H NIE GE A LF+
Sbjct: 530 EHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE 589
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP + Y+ ++N +A G WD V N+R +M VKK PG S +NG+ F + D
Sbjct: 590 LEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDG 649
Query: 605 YHAE 608
H +
Sbjct: 650 SHPK 653
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 214/447 (47%), Gaps = 11/447 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+VKC+ L CA ++ +EM ++DV WN L L+ ++LFY MR I+ +
Sbjct: 34 YVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIF 93
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
L AA +S+H+ G ++D+ + N +++ Y K ++ F +
Sbjct: 94 ASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAM-- 151
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ + S N++++G + D ++ GF ++ T +S+L + L +G+
Sbjct: 152 MIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGK 211
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H I G + D + N+L+++Y+KCG + A +F I +R VSWTA+I+G+ +G
Sbjct: 212 AIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG 271
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
LR+F M A G P++ T +S++ C ++LGK L N V
Sbjct: 272 -YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGT 330
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
AL+DMY+K + DA +F L ++ + +WT ++AG A +G+ +A+ F Q+ ++P
Sbjct: 331 ALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKP 390
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKE 502
N T + L C+ L+ G Q I D + S + D+ + G +++
Sbjct: 391 NEFTLASSLSGCSRIATLDSGR-----QLHSMAIKAGQSGDMFVASALVDMYAKCGCVED 445
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIH 529
A + V + D W T++C H
Sbjct: 446 A-EVVFDGLVSRDTVSWNTIICGYSQH 471
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 187/425 (44%), Gaps = 19/425 (4%)
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
+LK + I G+ D + ++ ++ Y KC+ L+ A V E ++ V WN ++
Sbjct: 7 ILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVL--EEMPIQDVQQWNQKLSS 64
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+++ + M + RL+ SL+S+ G +H+ YGF+ D
Sbjct: 65 ANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESD 124
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ + N ++MY K +++ F + S ++SG+ D+ R+ +
Sbjct: 125 ILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLV 184
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G P++ T +S++ C G L GK G+ + + N+L+++Y+KCGS
Sbjct: 185 EGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANY 244
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A ++F +PE+ VVSWT +I G G + L +F+Q++ PN TF+++L++C+
Sbjct: 245 ACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSS 303
Query: 459 TGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
++ G + I++ G + + + D+ + L++A + IK D
Sbjct: 304 LSDVDLGKQVHAQIVKNSLDGNDFVG-----TALVDMYAKNRFLEDAETIFNRL-IKRDL 357
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
W ++ + GE C +++ P N++ L G + I T+
Sbjct: 358 FAWTVIVAG---YAQDGQGEKAVKCFIQMQREGVKP-----NEFTLASSLSGCSRIATLD 409
Query: 577 KRNQV 581
Q+
Sbjct: 410 SGRQL 414
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 317/599 (52%), Gaps = 24/599 (4%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDR 90
M + P+ T+PF+ ++C+ S++ + + IHG++VK F +C
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ A+++FD+ +V+D+ +++ Q E + R+F M + D T L +
Sbjct: 61 FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF 120
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ L K VH I + D+ V +S Y+K L A +F + E+ R V
Sbjct: 121 IAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVV- 179
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
WN M+A K + L ++ M +G R D+ T + ++SS + + G+ H+H
Sbjct: 180 -WNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHI 238
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ G D VSV N+LI MY +C +DSA +F+ + D++ +SW+AMI GY + G AL
Sbjct: 239 LRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTAL 298
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M++ G D V +++++ GALE K+ Y+ GL + AL+ Y
Sbjct: 299 SLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITY 358
Query: 391 SKCGSIGDARELFY--ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
+KCGSI A+ LF + +K ++ W +MI+ A +G++ + L++++ + +P++VT
Sbjct: 359 AKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVT 418
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPELDHYSCMADLLGRKGKLKEALDF 506
FL +L AC ++G +EKG + + SY P +HY+CM +LLGR G + EA +
Sbjct: 419 FLGLLTACVNSGLVEKGKEF----FKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGEL 474
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
V++MPIK DA +WG LL ACK+H ++ E+ A L +EP +A Y+ ++N YA G+W
Sbjct: 475 VKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKW 534
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
DGVA +R+ ++ +KK PG S ING F D+ H + Y +L L L +E
Sbjct: 535 DGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKE 593
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 18/259 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I + + + L LF+ M ++ I + T + + A+L + + + H HI+
Sbjct: 180 WNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHIL 239
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + +C LD A KIF+ M + V SW+AM+ G+ + G L
Sbjct: 240 RNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALS 299
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ GIQADFV ++ + A +H L +K +H + + +G+ + S+ + +YA
Sbjct: 300 LFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYA 359
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC ++MA+ +F EE++ + ++ WNSM++ + Y M + + D
Sbjct: 360 KCGSIEMAQRLF--EEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQV 417
Query: 246 TVVSLLSSFVCPEALVQGR 264
T + LL++ V + +G+
Sbjct: 418 TFLGLLTACVNSGLVEKGK 436
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ W++ I+ V ++ L LF +MK + I+ + + I A + L + +H
Sbjct: 277 SVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLH 336
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGF 121
G+ +K + KC ++ A ++F+E + +D+ WN+M+ A G
Sbjct: 337 GYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGD 396
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+L+ M+ + D VT +GL A +++
Sbjct: 397 WSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNS 429
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 328/646 (50%), Gaps = 35/646 (5%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
P N + +S I ++ +EA + + L+ +M Q D+ P+ F I KACA
Sbjct: 126 PERNLVSYTSVITGYSQNGQEA-------EAITLYLKMLQADLVPDQFAFGSIIKACACA 178
Query: 68 SDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
D++ + +H ++K + +V+ +++ A K+F + +D+ SW++++
Sbjct: 179 GDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSII 238
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK-----SVHSFGI 168
GF+Q+GF L M G+ + G + A SLL+ +H I
Sbjct: 239 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS----SLLRPDYGSQIHGLCI 294
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
+ + + + YA+C L A VF IE SWN ++AG D++
Sbjct: 295 KLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERP--DTASWNVIIAGLANNGYADEA 352
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
++ + M +GF D ++ SLL + P AL QG +HS I GF D+SV N+L++M
Sbjct: 353 VSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTM 412
Query: 289 YSKCGDIDSARVLFDGICDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
Y+ C D+ LF+ ++ VSW A+++ Q E LRLF M + PD +T
Sbjct: 413 YTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 472
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ +++ GC + +L+LG Y+ GL + N LIDMY+KCGS+ AR +F ++
Sbjct: 473 MGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMD 532
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
VVSW+T+I G A +G EAL LF ++ + PN VTF+ VL AC+H G +E+G
Sbjct: 533 NGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLK 592
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ I + GIS P +H SC+ DLL R G L EA F+ M ++ D +W TLL ACK
Sbjct: 593 LYAIMQTEHGIS--PTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACK 650
Query: 528 IHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQ 587
N+++ + A + K++P ++ +V + + +A G W+ A +R+ MK++ VKK PGQ
Sbjct: 651 TQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQ 710
Query: 588 SLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
S + K F AED H E + Y VL + +E H K
Sbjct: 711 SWIDVEDKIHIFFAEDVLHPERDDIYTVLHNIWSQMLDECNPQHKK 756
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 214/462 (46%), Gaps = 17/462 (3%)
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S+ Y +++ HI+ S + KC L A ++FD M R++ S+ +++ G++Q G +
Sbjct: 93 SNCKYDTILNNHIL-SMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAIT 151
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ M + D + +A A + L K +H+ I + + + N I+ Y
Sbjct: 152 LYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYV 211
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT-YGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ + + A VF GI + ++SW+S++AG + G +F+ + + + F +
Sbjct: 212 RFNQMSDASKVFYGIPA--KDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 269
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN--TLISMYSKCGDIDSARVLFDG 304
S L + C L HG+ +L + I +L MY++CG +DSAR +F+
Sbjct: 270 FGSSLKA--CSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQ 327
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I SW +I+G A G DEA+ +F M +G +PD +++ S++ + AL G
Sbjct: 328 IERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQG 387
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCAL 423
++ G ++ VCN+L+ MY+ C + LF K VSW ++ C
Sbjct: 388 MQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQ 447
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+ + VE L LF ++ + P+ +T +L+ C L+ G + + +
Sbjct: 448 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLV----- 502
Query: 484 LDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
L+ + + + D+ + G L++A SM D W TL+
Sbjct: 503 LEQFIKNGLIDMYAKCGSLRQARRIFDSMD-NGDVVSWSTLI 543
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 127/237 (53%), Gaps = 9/237 (3%)
Query: 230 NFYRHMMY--------NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+FYR + + F++ + T +SL+ + +L QGR +H H ++ D +
Sbjct: 42 SFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTIL 101
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
N ++SMY KCG + AR +FD + +R VS+T++I+GY+Q G EA+ L+ M A
Sbjct: 102 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADL 161
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
+PD S+I C +G + LGK +++ NALI MY + + DA +
Sbjct: 162 VPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASK 221
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQACT 457
+FY +P K ++SW+++IAG + G EAL +++ + PN F + L+AC+
Sbjct: 222 VFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 278
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Query: 328 EALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
EAL F FA + + L T +S+I C S +L G+ ++ + K + ++ N +
Sbjct: 46 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHI 105
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ MY KCGS+ DARE+F +PE+ +VS+T++I G + NG+ EA+ L+ ++++ DL P++
Sbjct: 106 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQ 165
Query: 447 VTFLAVLQACTHTG 460
F ++++AC G
Sbjct: 166 FAFGSIIKACACAG 179
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/527 (36%), Positives = 288/527 (54%), Gaps = 8/527 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + K ++ A+++FDEM D S+N ++ +A+ G + +LF MR + D
Sbjct: 82 SAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGF 141
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ G+ A ++ L++ +H+ + G+D+ VSV N I+SY+K LK A +F +
Sbjct: 142 TLSGIITAC--GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWL 199
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R VSWNSMV + +L Y M G +D+ T+ S+L++F + L+
Sbjct: 200 SED-RDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLG 258
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARVLFDGICDRTRVSWTAMISGYA 321
G H+ I G+ + V + LI +YSKCG + R +FD I + V W MISGY+
Sbjct: 259 GLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYS 318
Query: 322 QKGDL-DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN- 379
DL DEAL F ++ G PD +++ +IS C + G+ A + N
Sbjct: 319 LYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNR 378
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V NALI MYSKCG++ DA+ LF +PE VS+ +MIAG A +G ++L LF +++E
Sbjct: 379 ISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLE 438
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+ P +TF++VL AC HTG +E G + GI PE H+SCM DLLGR GK
Sbjct: 439 MGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIE--PEAGHFSCMIDLLGRAGK 496
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L EA ++++P W LL AC+IH N+E+ A L +L+P +AAPYV +AN
Sbjct: 497 LSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANI 556
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
Y+ GR A++R +M+ VKK PG S +N + F AED +H
Sbjct: 557 YSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFH 603
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 151/330 (45%), Gaps = 23/330 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + E K L L+ +M + + T + A + DL+ H ++
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLI 267
Query: 82 KSP--------------FVKCD--RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL-EN 124
KS + KC LDC K+FDE++ D+ WN M+ G++ L +
Sbjct: 268 KSGYHQNSHVGSGLIDLYSKCGGCMLDCR-KVFDEISNPDLVLWNTMISGYSLYEDLSDE 326
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 183
L F +++VG + D +++ + A + S + VH + + + ++ +SV N I
Sbjct: 327 ALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALI 386
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y+KC +L+ A+ +F + E VS+NSM+AG SL+ ++ M+ GF
Sbjct: 387 AMYSKCGNLRDAKTLFDTMPE--HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPT 444
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHS-HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T +S+L++ + G++ + +G + + + +I + + G + A L
Sbjct: 445 NITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLI 504
Query: 303 DGIC-DRTRVSWTAMISGYAQKGDLDEALR 331
+ I D W+A++ G+++ A++
Sbjct: 505 ETIPFDPGFFFWSALLGACRIHGNVELAIK 534
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 3/191 (1%)
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D +V NTLIS Y+K ++ A LFD + VS+ +I+ YA++GD A +LF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M A D T+ +I+ CG + + L + + GL V V NALI YSK G
Sbjct: 131 MREAFLDMDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 396 IGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ +AR +F+ L E + VSW +M+ + E +AL+L+ ++ L + T +VL
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 455 ACTHTGFLEKG 465
A T+ L G
Sbjct: 249 AFTNVQDLLGG 259
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/588 (32%), Positives = 303/588 (51%), Gaps = 28/588 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + L +F QM + P T + +C + + + IHG +
Sbjct: 122 WNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGI 181
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC L A +F+E+ + SWN M+ + Q G + +
Sbjct: 182 KSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAML 241
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ ++ ++VT++ L A H L S H + I G D SV + + SYA
Sbjct: 242 VFKQMQKERVEVNYVTIISLLSANAH------LDSTHCYVIKTGFATDASVITSLVCSYA 295
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL--NFYRHMMYNGFRLDVT 245
C +++ A L++ + +R +VS +M++G Y +K + L + M+ + D
Sbjct: 296 GCGNIESAGLLYNLMPQR--NLVSLTAMISG--YAEKGNMGLVVECFTQMLQLKMKPDAV 351
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+VS+L F P + G +H++G+ G D V+N LISMYSK GDI++ LF +
Sbjct: 352 AMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEM 411
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ +SW ++IS Q G +A+ LF M G PD +T+ S+++GC + G L+ G+
Sbjct: 412 GEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGE 471
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
NY L + AL+DMY KCG + A +F ++ E + +W TMI+G L+G
Sbjct: 472 RLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSG 531
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
AL + ++ E L+P+R+TFL VL ACTH G + +G +D G+ P L
Sbjct: 532 HEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMI--PGLQ 589
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H +CM DLL R G L+EA+ FV++M ++ D+ IWG LL +C IH +++GE +A L L
Sbjct: 590 HNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLL 649
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+ +S YV M+N YA GRWD VA +R MMK G SL ++
Sbjct: 650 DYYSGGLYVLMSNLYASKGRWDDVARVRKMMKDTGGDGSSGISLIEVS 697
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/409 (33%), Positives = 211/409 (51%), Gaps = 22/409 (5%)
Query: 71 IYSQMIHGHIVKSPFVKC-----------DRLDCAY---KIFDEMAVRDVASWNAMLVGF 116
I + I H+ KS F + +L C Y +F+EM RDV SWNA++ G+
Sbjct: 70 IEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGY 129
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
++ G+ + L +F M G T++GL + + K++H FGI G+D D
Sbjct: 130 SRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDC 189
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
V N S YAKC DL+ AE++F I E +T VSWN+M+ FD+++ ++ M
Sbjct: 190 RVKNALTSMYAKCADLQAAEVLFEEIFE--KTEVSWNTMIGAYGQNGLFDEAMLVFKQMQ 247
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
++ T++SLLS+ ++ H + I GF D SVI +L+ Y+ CG+I+
Sbjct: 248 KERVEVNYVTIISLLSANAHLDS------THCYVIKTGFATDASVITSLVCSYAGCGNIE 301
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
SA +L++ + R VS TAMISGYA+KG++ + F M PD V ++S++ G
Sbjct: 302 SAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFT 361
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ G Y GL + +V N LI MYSK G I LF + EK ++SW +
Sbjct: 362 DPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNS 421
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+I+ C G +A++LF Q+ P+ +T ++L C+ GFL+ G
Sbjct: 422 VISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFG 470
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 152/298 (51%), Gaps = 8/298 (2%)
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G + V + ++ Y K + A+ +F E R VVSWN+++ G + D+L
Sbjct: 83 GFNQYVYLTTAFLDFYGKLGCIYYAQHLF--EEMPRRDVVSWNALICGYSRNGYDYDALE 140
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M+ GF T+V L+ S P+ + QG+ +H GI G DLD V N L SMY+
Sbjct: 141 VFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYA 200
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
KC D+ +A VLF+ I ++T VSW MI Y Q G DEA+ +F M+ + VT++S
Sbjct: 201 KCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIS 260
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++S + Y G + V +L+ Y+ CG+I A L+ +P++
Sbjct: 261 LLSANAHLDSTHC------YVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRN 314
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+VS T MI+G A G ++ F Q+++L ++P+ V +++L T F+ G I
Sbjct: 315 LVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGI 372
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 315/606 (51%), Gaps = 18/606 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V + + L L++ M + + TF ++CA LS +H + +
Sbjct: 239 WSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYAL 298
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F KCDR+ A K+F+ S NA++VG+A+ + L
Sbjct: 299 KTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALE 358
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F +++ + D +++ G A K +H + G+D ++ V NT + YA
Sbjct: 359 IFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYA 418
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A L+F +E ++ VSWN+++A + +++L + M+ + D T
Sbjct: 419 KCGALMEACLIFDDME--IKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTF 476
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S++ + +AL G VH I G LD V + +I MY KCG + A + + + +
Sbjct: 477 GSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEE 536
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
RT VSW ++ISG++ + + AL F M G +PD T +++ C +ELGK
Sbjct: 537 RTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQI 596
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
L +V + + ++DMYSKCG++ D+R +F P++ V+W+ MI A +G
Sbjct: 597 HGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+A+ LF ++ +++PN F++VL+AC H GF++KG G+ +P+++HY
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGL--DPQMEHY 714
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SCM DLLGR G++ EAL+ ++SMP ++D IW TLL C++ N+E+ E A L +L+P
Sbjct: 715 SCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDP 774
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV ++N YA+ G W VA IR+ MK ++KK PG S + + F D+ H
Sbjct: 775 QDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHP 834
Query: 608 ESELTY 613
SE Y
Sbjct: 835 RSEEIY 840
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 210/471 (44%), Gaps = 50/471 (10%)
Query: 45 MKQNDIEPNN-LTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCD 89
+ N + P LTF I + C+ L + + H I + FV KC
Sbjct: 28 ISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCL 87
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFA-------------------------------Q 118
L+ A+ +FD+M RDV SWN M+ G+A Q
Sbjct: 88 NLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQ 147
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
GF + +F MRL+ IQ D+ T + +A + L VH I +G D+DV
Sbjct: 148 NGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVT 207
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ Y+ C L A +FC + ER V W++++AG D+F + L Y+ M+
Sbjct: 208 GTALVDMYSTCKKLDHAFNIFCEMPER--NSVCWSAVIAGYVRNDRFTEGLKLYKVMLDE 265
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + T S S A G +H++ + F D V + MY+KC + A
Sbjct: 266 GMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDA 325
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ- 357
R +F+ + TR S A+I GYA++ + EAL +F +++ + D +++ ++ C
Sbjct: 326 RKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAI 385
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G LE G A GL N+ V N ++DMY+KCG++ +A +F + K VSW +
Sbjct: 386 KGYLE-GIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAI 444
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
IA N E L LF ++ + P+ TF +V++AC L G +
Sbjct: 445 IAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEV 495
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 238/524 (45%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WNS + + K++ +F +M+ +I+ + TF + KAC + D +H
Sbjct: 138 WNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAI 197
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + + C +LD A+ IF EM R+ W+A++ G+ + L+
Sbjct: 198 QMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLK 257
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ M G+ T ++ L +H++ + D V + YA
Sbjct: 258 LYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYA 317
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KCD + A VF R S N+++ G D+ ++L +R + + D ++
Sbjct: 318 KCDRMVDARKVFNTFPNPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISL 375
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
L++ + ++G +H + G D ++ V NT++ MY+KCG + A ++FD +
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW A+I+ + Q ++E L LF +M + PD T S++ C AL G
Sbjct: 436 KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEV 495
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G+ + V +A+IDMY KCG + +A ++ L E+ VSW ++I+G + +
Sbjct: 496 HGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQG 555
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELD 485
AL F +++++ + P+ T+ VL C + +E G I I++ + + ++
Sbjct: 556 ENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK-----LQLHSDVY 610
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G ++++ + P K D W ++CA H
Sbjct: 611 IASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYH 653
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 211/444 (47%), Gaps = 18/444 (4%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ + T N+ I +++ + L +FR ++++ ++ + ++ AC+ + +
Sbjct: 332 FPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+HG VK + KC L A IFD+M ++D SWNA++ Q
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQN 451
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+E L LF +M ++ D T + +A K L+ VH I G+ D V
Sbjct: 452 EHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG 511
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ I Y KC L AE + +EE RT VSWNS+++G + + +++L+++ M+ G
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEE--RTTVSWNSIISGFSSEKQGENALSYFSRMLQVG 569
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D T ++L + G+ +H + DV + +T++ MYSKCG++ +R
Sbjct: 570 VIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSR 629
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
++F+ R V+W+AMI YA G ++A++LF M+ P+ +S++ C G
Sbjct: 630 IMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMG 689
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
++ G +F GL + + ++D+ + G + +A EL ++P E V W T+
Sbjct: 690 FVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTL 749
Query: 418 IAGCALNGEFVEALDLFHQLMELD 441
+ C L G A + L++LD
Sbjct: 750 LGICRLQGNVEVAEKAANSLLQLD 773
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R+ +T++ WNS I ++ + L F +M Q + P+N T+ + CA L+ +
Sbjct: 533 RLEERTTVS-WNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVE 591
Query: 72 YSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ IHG I+K + KC + + +F++ RD +W+AM+ +A
Sbjct: 592 LGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYA 651
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF---GIHIGVD 173
G E+ ++LF M+L ++ + + + +A H + K +H F H G+D
Sbjct: 652 YHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVD--KGLHYFREMRSHYGLD 708
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 290/554 (52%), Gaps = 14/554 (2%)
Query: 85 FVKCDRLDCAYKIFDEMA--VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ KC++++ A + + A R+V ++NA++ GF G ++ L + MR G+ D
Sbjct: 2 YAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKY 61
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T L + + +K +H +G+D D+ V ++ +SSY K + +K A +F I
Sbjct: 62 TFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEI 121
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+R VV WNSMV G +FD++L R M G + TV +LS F
Sbjct: 122 PDR--DVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDN 179
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GRLVH I GFD VSV N LI MY KC + A +F+ + ++ SW +++S
Sbjct: 180 GRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANEL 239
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKD--- 378
D D LRLF M G DLVT+ +++ C AL G+ Y G +KD
Sbjct: 240 CSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGES 299
Query: 379 ----NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
N+ NAL+DMY+KCGS+ DA +FY + + SW MI G ++G EAL +F
Sbjct: 300 ENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMF 359
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
+ + L+PN +TF+ VL AC+H GF+ +G I + + P + HY+C+ D+L
Sbjct: 360 SDMCKSGLKPNEITFVGVLLACSHAGFISQG--IKFLGEMELKHGVVPTIQHYTCVIDML 417
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
GR G+L+EA +MPI+++ +W LL AC+++ N+++ E A +F+L P YV
Sbjct: 418 GRAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYV 477
Query: 555 EMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYP 614
M+N Y GR+ V +IR M++ VKK PG S + TF DR H E+ L YP
Sbjct: 478 LMSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGDRNHPEARLIYP 537
Query: 615 VLDCLALHSREEAY 628
L LA H RE Y
Sbjct: 538 ELHLLAAHIREHGY 551
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 203/428 (47%), Gaps = 26/428 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I V L + +M+Q + P+ TFP + K ++ ++ + IHG +
Sbjct: 28 YNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKYTFPCLIKGLCEVMEVFQVKKIHGLVR 87
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S ++K + + A ++FDE+ RDV WN+M+ G+AQ+G + L
Sbjct: 88 KLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNSMVNGYAQIGRFDEALG 147
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M G+ TV G+ + VH F I +G D+ VSVCN I Y
Sbjct: 148 VCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMGFDSCVSVCNALIDMYG 207
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F + E + + SWNS+++ D +L + M+ +G +LD+ T+
Sbjct: 208 KCRCVVDALEIFETMNE--KDIFSWNSILSANELCSDHDGTLRLFDRMLGDGVQLDLVTI 265
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLD--------VSVINTLISMYSKCGDIDSAR 299
++L + ALV GR +H + I GF D + IN L+ MY+KCG + A
Sbjct: 266 TTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTINALMDMYAKCGSMRDAG 325
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
++F + +R SW MI GY G +EAL +F M +G P+ +T + ++ C +G
Sbjct: 326 MVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSGLKPNEITFVGVLLACSHAG 385
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
+ G K+ G+ + +IDM + G + +A +L +P + V W +
Sbjct: 386 FISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVVWRAL 445
Query: 418 IAGCALNG 425
+A C L G
Sbjct: 446 LAACQLYG 453
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 137/334 (41%), Gaps = 30/334 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + L + R+M Q + + T + A D +++HG ++
Sbjct: 129 WNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMI 188
Query: 82 KSPFVKC-----------DRLDC---AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F C + C A +IF+ M +D+ SWN++L + LR
Sbjct: 189 KMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLR 248
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD--------VSVC 179
LF M G+Q D VT+ + A H L + +H + I G D +
Sbjct: 249 LFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTI 308
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N + YAKC ++ A +VF + R SWN M+ G +++L + M +G
Sbjct: 309 NALMDMYAKCGSMRDAGMVFYNMSN--RDTASWNIMIMGYGMHGYGNEALYMFSDMCKSG 366
Query: 240 FRLDVTTVVSLLSSFVCPEA--LVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+ + T V +L C A + QG + + + +G + +I M + G ++
Sbjct: 367 LKPNEITFVGVL--LACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLE 424
Query: 297 SARVLFDGICDRTR-VSWTAMISGYAQKGDLDEA 329
A L + +T V W A+++ G++D A
Sbjct: 425 EAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLA 458
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 288 MYSKCGDIDSARVLFDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
MY+KC ++ A ++ + D R ++ A+ISG+ G + L + M AG LPD
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T +I G + + K GL ++ V ++L+ Y K + +ARELF
Sbjct: 61 YTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDE 120
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+P++ VV W +M+ G A G F EAL + ++ + + ++ T VL G + G
Sbjct: 121 IPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNG 180
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + ++ + + + D+ G+ + +AL+ ++M K D W ++L A
Sbjct: 181 RLVHGFMIK---MGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEK-DIFSWNSILSA 236
Query: 526 CKI 528
++
Sbjct: 237 NEL 239
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 25/229 (10%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WNS + ++ TL LF +M + ++ + +T I AC+ L+ L++ + IHG
Sbjct: 227 IFSWNSILSANELCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHG 286
Query: 79 HIVKSPFV----------------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
+++ + FV KC + A +F M+ RD ASWN M++G+
Sbjct: 287 YMIVNGFVKDGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGY 346
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDAD 175
G+ L +F +M G++ + +T +G+ A HA +S +K + + GV
Sbjct: 347 GMHGYGNEALYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPT 406
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT-YGD 223
+ I + L+ A + + + VV W +++A C YG+
Sbjct: 407 IQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVV-WRALLAACQLYGN 454
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/535 (36%), Positives = 284/535 (53%), Gaps = 24/535 (4%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
SWN + GF + L+ ++ G + D T L +A + + +
Sbjct: 45 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 104
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+H+G D+D+ V N I C DL A +F + +R +VSWNSM+ G
Sbjct: 105 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMF--DKSCVRDLVSWNSMINGYVRRGWAY 162
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
++LNFYR M G + D T++ ++SS E L GR H + G L V + N L+
Sbjct: 163 EALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALM 222
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWT----------------AMISGYAQKGDLDEAL 330
MY KCG+++SAR LFD + ++T VSWT AMI GY EAL
Sbjct: 223 DMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEAL 282
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M+A PD VT++S +S C Q GAL++G W +Y L NV + ALIDMY
Sbjct: 283 ALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMY 342
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
+KCG I A ++F LP + ++WT +I+G AL+G A+ F ++++ + P+ VTFL
Sbjct: 343 AKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFL 402
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
+L AC H G +E+G Q K + +P+L HYSCM DLLGR G L+EA + ++SM
Sbjct: 403 GLLSACCHGGLVEEGRKY-FSQMSSK-FNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSM 460
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
PI++DA +WG L AC+IH N+ +GE A L +++PH + YV +AN Y W
Sbjct: 461 PIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAG 520
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
R +M++ V+K PG S +NG F D+ H +SE Y +CL +R+
Sbjct: 521 KXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIY---ECLIQLTRQ 572
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 221/458 (48%), Gaps = 31/458 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYS 73
R+ WN IR ++ + ++L++++ Q D +P+N T+P + KACA+LS +
Sbjct: 39 RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 98
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
I GH++ F V C LD A K+FD+ VRD+ SWN+M+ G+ +
Sbjct: 99 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 158
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G+ L + M++ GI+ D VT++G+ + + L L + H + G+ V +
Sbjct: 159 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 218
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERL--------------RTVVSWNSMVAGCTYGDKF 225
N + Y KC +L+ A +F + + + VV WN+M+ G + ++
Sbjct: 219 NALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRG 278
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
++L + M D T+VS LS+ AL G +H + + L+V++ L
Sbjct: 279 KEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTAL 338
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
I MY+KCG I A +F + R ++WTA+ISG A G+ A+ F M +PD
Sbjct: 339 IDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDE 398
Query: 346 VTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
VT L ++S C G +E G K+F + L + + ++D+ + G + +A EL
Sbjct: 399 VTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIK 458
Query: 405 ALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
++P E V W + C ++G + +L+++D
Sbjct: 459 SMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMD 496
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 325/608 (53%), Gaps = 23/608 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I V + + L LFR+M++ + N TF + S + IHG ++
Sbjct: 216 WNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVL 275
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC R++ A ++F+ M RD SWN +L G Q + L
Sbjct: 276 KSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALN 335
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F +M+ G + D V+V+ L A+ + +L K VH++ I G+D+++ + NT + YA
Sbjct: 336 YFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYA 395
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +K F + E+ ++SW +++AG + +++N +R + G +D +
Sbjct: 396 KCCCVKYMGHAFECMHEK--DLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMI 453
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+L + C + + HG + DL D+ + N ++++Y + G ID AR F+ I
Sbjct: 454 GSVLRA--CSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIR 511
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ VSWT+MI+ G EAL LF++++ PD + ++S +S +L+ GK
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G + ++L+DMY+ CG++ ++R++F+++ ++ ++ WT+MI ++G
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYDDKGISYNPELD 485
+A+ LF ++ + ++ P+ +TFLA+L AC+H+G + +G I++Y G P +
Sbjct: 632 GNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKY---GYQLEPWPE 688
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLL R L+EA FV++MPIK + IW LL AC IH N E+GE A L +
Sbjct: 689 HYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQS 748
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+ ++ Y ++N +A GRW+ V +R MK N +KK PG S ++ K TF A D+
Sbjct: 749 DTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKS 808
Query: 606 HAESELTY 613
H +++ Y
Sbjct: 809 HPQTDDIY 816
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 204/408 (50%), Gaps = 16/408 (3%)
Query: 64 CAKLSDLIYSQMIHGHIVKSP------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
C L Q +H ++KS + KC L A K+FDEM+ R + SWNA
Sbjct: 56 CVAAKALPQGQQLHALLLKSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNA 115
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
++ F G + L+ +MR++G+ D T + +A L +H + G
Sbjct: 116 LMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCG 175
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
V VCN I+ Y KC DL A ++F GI VSWNS+++ ++L+
Sbjct: 176 YGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSL 235
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+R M G + T V+ L P + G +H + DV V N LI+MY+K
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAK 295
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG ++ A +F+ + R VSW ++SG Q +AL F M+ +G+ PD V+VL++
Sbjct: 296 CGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNL 355
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
I+ G+SG L GK YA GL N+ + N L+DMY+KC + F + EK +
Sbjct: 356 IAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDL 415
Query: 412 VSWTTMIAGCALNGEFVEALDLFH--QLMELDLRPNRVTFLAVLQACT 457
+SWTT+IAG A N +EA++LF Q+ +D+ P + +VL+AC+
Sbjct: 416 ISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIG--SVLRACS 461
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 235/468 (50%), Gaps = 21/468 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI WN+ + V+ + + + L++ M+ + + TFP + KAC L + IH
Sbjct: 109 TIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDE--MAVRDVASWNAMLVGFAQMGF 121
G VK + + KC L A +FD M D SWN+++ G
Sbjct: 169 GVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGN 228
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L LF M+ VG+ ++ T + Q + L +H + ADV V N
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANA 288
Query: 182 WISSYAKCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I+ YAKC ++ A VF E L R VSWN++++G + + D+LN++R M +G
Sbjct: 289 LIAMYAKCGRMEDAGRVF---ESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQ 345
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D +V++L+++ L++G+ VH++ I G D ++ + NTL+ MY+KC +
Sbjct: 346 KPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGH 405
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F+ + ++ +SWT +I+GYAQ EA+ LF ++ G D + + S++ C +
Sbjct: 406 AFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKS 465
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+ Y L D +M+ NA++++Y + G I AR F ++ K +VSWT+MI
Sbjct: 466 RNFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITC 524
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
C NG VEAL+LF+ L + +++P+ + ++ L A + L+KG I
Sbjct: 525 CVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
RS I W S I V+ + L LF +KQ +I+P+++ A A LS L +
Sbjct: 511 RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGK 570
Query: 75 MIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG +++ F C ++ + K+F + RD+ W +M+ G
Sbjct: 571 EIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHG 630
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ LF M + D +T + L A H+
Sbjct: 631 CGNKAIALFKKMTDQNVIPDHITFLALLYACSHS 664
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 300/551 (54%), Gaps = 25/551 (4%)
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
K FD DV SWN+++ A+ G LR F MR + I+ + T ++
Sbjct: 40 KYFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L+ K H + G ++D+ V + I Y+KC L A ++F I R +V+W S+
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRR--NIVTWTSL 154
Query: 216 VAGCTYGDKFDDSLNFYRHMMYN---------GFRLDVTTVVSLLS--SFVCPEALVQGR 264
+ G D ++L ++ ++ G +D ++S+LS S V +A+ +G
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG- 213
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH I G D + V NTL+ Y+KCG++ +R +FD + ++ VSW +MI+ YAQ G
Sbjct: 214 -VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNG 272
Query: 325 DLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+A +F M +A G + VT+ +++ C GAL +G + G +NV++
Sbjct: 273 LSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMA 332
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
++IDMY KCG AR F + EK V SWT MIAG ++G EALD+F+Q++ ++
Sbjct: 333 TSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVK 392
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLK 501
PN +TF++VL AC+H GFLE+GW ++ YN P ++HY CM DLLGR G +K
Sbjct: 393 PNYITFISVLAACSHAGFLEEGWR----WFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIK 448
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
EA + ++SM ++ D +WG+LL AC+IH ++E+ E A LFKL+P + YV +AN YA
Sbjct: 449 EAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYA 508
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
GRW V +R ++K + K PG SL + G+ F D+ H + E Y L+ L++
Sbjct: 509 DAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSV 568
Query: 622 HSREEAYSSHL 632
+E Y ++
Sbjct: 569 KLQEAGYVPNM 579
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 227/464 (48%), Gaps = 28/464 (6%)
Query: 4 SSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA 63
++L N+ + + + WNS I E ++ ++L F M++ DI+PN TFP K+
Sbjct: 32 TNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKS 91
Query: 64 CAKLSDLIYSQMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASW 109
C+ L DL + H V S + KC +L A +FDE+ R++ +W
Sbjct: 92 CSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151
Query: 110 NAMLVGFAQMGFLENVLRLFY---------NMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
+++ G+ Q L +F N VG D V ++ + A + ++
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+ VH I +G+D + V NT + +YAKC ++ ++ VF + E + VVSWNSM+A
Sbjct: 212 EGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE--KDVVSWNSMIAVYA 269
Query: 221 YGDKFDDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
D+ + M+ G + + T+ +LL + AL G +H I G+ +V
Sbjct: 270 QNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNV 329
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+ ++I MY KCG + AR FDG+ ++ SWTAMI+GY G EAL +F+ M A
Sbjct: 330 IMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA 389
Query: 340 GELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G P+ +T +S+++ C +G LE G +WF+ + ++ V ++D+ + G I +
Sbjct: 390 GVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKE 449
Query: 399 ARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
A L ++ + V W +++A C ++ + A +L +LD
Sbjct: 450 AYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLD 493
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 279/505 (55%), Gaps = 9/505 (1%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M +GIQ D T + +A +H +H + G + V + N+ I+ Y KCD
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+++ VF + ++ VSW++++ C D+ + + +R M+ G R + ++L
Sbjct: 61 YELSRQVFDEMPDK--NAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSR---PSRGAIL 115
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
++ C + + V+ + G D D SV + M+++CG ++ AR LFDGI + V
Sbjct: 116 NAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLV 175
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
+W I Y + EAL L M G PD +T+L +I C + +L
Sbjct: 176 TWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGII 235
Query: 372 CSGGLKDNVM-VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
+G + ++ V ALID+Y KCGS+ AR++F + E+ +++W+ MI+G ++G EA
Sbjct: 236 TTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREA 295
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
L+LF Q M+ ++P+ +TF+++L AC+H+G + +GW D G++ PE HY+CM
Sbjct: 296 LNLFDQ-MKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPE--HYACM 352
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSA 550
D+LGR GKL EA DF++ MP++ +A +WG LL AC+IHLN+++ E VA LF L+PH+A
Sbjct: 353 VDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNA 412
Query: 551 APYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
YV + N Y L G+ +IRT+MK VKK G S+ I K F A DR H +++
Sbjct: 413 GRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTD 472
Query: 611 LTYPVLDCLALHSREEAYSSHLKWI 635
L Y L+ L R+E Y+ + ++
Sbjct: 473 LIYSELERLMDRIRQEGYTPDINFV 497
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 193/395 (48%), Gaps = 29/395 (7%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAY 95
I+P+N TFPFI KAC+ L + IH +VK + + KCD+ + +
Sbjct: 6 IQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSR 65
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++FDEM ++ SW+A++ Q + LF M G + ++ A + +
Sbjct: 66 QVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILN-AMACVRSH 124
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ V+ + G+D D SV + +A+C +++A +F GI + +V+W +
Sbjct: 125 EEA--DDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMS--KDLVTWATT 180
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH-SHGI--- 271
+ D ++L + MM G D T++ ++ + C L +L H HGI
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRA--C-STLASFQLAHIVHGIITT 237
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
+ ++ ++V LI +Y KCG + AR +FDG+ +R ++W+AMISGY G EAL
Sbjct: 238 GFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALN 297
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMY 390
LF M+A+ + PD +T +S++S C SG + G + F++ A G+ ++D+
Sbjct: 298 LFDQMKASVK-PDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDIL 356
Query: 391 SKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN 424
+ G + +A + +P + + W ++ C ++
Sbjct: 357 GRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL---SDLIYSQMIHG 78
W++ I + + + LFRQM P+ A AC + +D +Y ++
Sbjct: 79 WSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAI-LNAMACVRSHEEADDVYRVVVEN 137
Query: 79 HI-----VKSP----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
+ V+S F +C R++ A K+FD + +D+ +W + + + L L
Sbjct: 138 GLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLL 197
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV--DADVSVCNTWISSYA 187
M L GI D +T++G+ +A L VH I G + ++V I Y
Sbjct: 198 KQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI-ITTGFFYNQLLAVETALIDLYV 256
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A VF G++E R +++W++M++G ++LN + M + + D T
Sbjct: 257 KCGSLTYARKVFDGMQE--RNIITWSAMISGYGMHGWGREALNLFDQMKAS-VKPDHITF 313
Query: 248 VSLLSS 253
VS+LS+
Sbjct: 314 VSILSA 319
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + W + I V + + L L +QM I P+ +T + +AC+ L+ + +
Sbjct: 171 SKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHI 230
Query: 76 IHGHIVKSPF---------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+HG I F VKC L A K+FD M R++ +W+AM+ G+ G
Sbjct: 231 VHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHG 290
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ L LF M+ ++ D +T + + A H+
Sbjct: 291 WGREALNLFDQMK-ASVKPDHITFVSILSACSHS 323
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 321/626 (51%), Gaps = 20/626 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS-------------- 68
N IR + L +R M P+ TFP + K CA+L
Sbjct: 76 NVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIR 135
Query: 69 -DLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
L+ S++ G+ + + + K + A ++FD M VRD+ +WN+M+ G+ G L
Sbjct: 136 LGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALD 195
Query: 128 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M + +Q D V ++ A L + VH++ I G++ DV V + + Y
Sbjct: 196 CFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMY 255
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC + AE +F + R TVV+WN M+ G +++ + + M G +++V T
Sbjct: 256 CKCGAIASAEGMFATMPSR--TVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVT 313
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
++LL++ E+ + GR VH + F V + L+ MYSK G + S+ +F +
Sbjct: 314 AINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMT 373
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++T VSW MI+ Y K +EA+ LF + PD T+ +++ G L +
Sbjct: 374 NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQ 433
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+Y +N +V NA++ MY++CG + +R++F + K V+SW T+I G A++G+
Sbjct: 434 MHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQ 493
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL++F ++ L+PN TF++VL AC+ +G ++GW + D GI P+++H
Sbjct: 494 GKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGII--PQIEH 551
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y CM DLLGR G L+E L F++S+PI IWG+LL A + +I+I EY A +F+LE
Sbjct: 552 YGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELE 611
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
+ YV +++ YA GRW+ V IR+ M +++ +S+ ++G +C+F D H
Sbjct: 612 HDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTH 671
Query: 607 AESELTYPVLDCLALHSREEAYSSHL 632
+S+ + V D L+ E Y +L
Sbjct: 672 PQSKTIHEVSDVLSRKIGETDYPRNL 697
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/572 (34%), Positives = 301/572 (52%), Gaps = 24/572 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFV 86
+ R PN+ T +AC L +L +HG VK S +
Sbjct: 202 MVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYT 261
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KCD + A +F E+ +D+ SW +++ + + G E + LF M G+Q D V +
Sbjct: 262 KCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISC 321
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L + + K+ H+ + V + N IS YAKC + +A VF + +R
Sbjct: 322 LLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQR- 380
Query: 207 RTVVSWNSMV-AGCTYGDKFDDSLNFYRHMMY---NGFRLDVTTVVSLLSSFVCPEALVQ 262
SW+SMV A C G L YR M + + F D +++S++SS L
Sbjct: 381 -DTDSWSSMVVAYCKAGLDLK-CLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL 438
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ H + I + + SV N LISMY +CG+ D AR +F + + V+W+A+IS Y+
Sbjct: 439 GQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSH 498
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +AL L+ M G P+ T++S+IS C ALE G+ ++ GL+ ++ +
Sbjct: 499 LGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSI 558
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
C AL+DMY KCG +G AR++F ++ E+ VV+W MI+G ++GE ++AL LF + ++
Sbjct: 559 CTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNV 618
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+PN +TFLA+L AC H G ++KG + + S P L HY+CM DLLG+ G L+E
Sbjct: 619 KPNSLTFLAILSACCHAGLVDKGRELFTRMEE---YSLEPNLKHYACMVDLLGKSGHLQE 675
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A D V +MPI+ D GIWGTLL ACK+H N E+G VA F +P + Y+ M+N Y
Sbjct: 676 AEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGS 735
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
+W+ + +R MMK + V+K G S I G
Sbjct: 736 AEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 247/532 (46%), Gaps = 30/532 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS +R ++ TL R+M+ + P+ T P +A A A+L L +H + V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 82 KSP-----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG---- 120
+ + +C + A ++FDEM RDV +W A++ G G
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L ++R+ + G + + T+ +A LS+ +H FG+ GV SV +
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVS 254
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ S Y KCD + A ++F + E + +VSW S++ + ++ + M +G
Sbjct: 255 SLFSMYTKCDSTEDARILFPELPE--KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGL 312
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D + LL+ + G+ H+ + F V + N LISMY+KC +D A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP---DLVTVLSMISGCGQ 357
+F + R SW++M+ Y + G + L L+ M+ + D +++S+IS C +
Sbjct: 373 VFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G L LG+ Y+ +N V NALI MY +CG+ AR++F + K VV+W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+ + G +AL L+ Q++ ++PN T ++V+ +C + LE G +I K
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG---ELIHSHVKD 549
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ +L + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 15/235 (6%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ ++ + W++ I + + LLL+ QM ++PN+ T + +CA L+ L +
Sbjct: 480 MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEH 539
Query: 73 SQMIHGHI--------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++IH H+ + ++KC +L A K+FD M RDV +WN M+ G+
Sbjct: 540 GELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGM 599
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G L+LF M ++ + +T + + A HA + + + + ++ ++
Sbjct: 600 HGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKH 659
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ K L+ AE V + + W +++ C D F+ L +
Sbjct: 660 YACMVDLLGKSGHLQEAEDVVSAMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAK 713
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 317/623 (50%), Gaps = 28/623 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V ++ +L LF Q+ ++++ P+ + AC+ L L + IH HI+
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ +VKC R+ A+K+F+ M +++ SW +L G+ Q + +
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M G++ D + + L VH++ I + D V N+ I YA
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT-YGDKFD--DSLNFYRHMMYNGFRLDV 244
KCD L A VF VV +N+M+ G + G +++ ++LN +R M + R +
Sbjct: 397 KCDCLTDARKVFDIFAAA--DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T VSLL + +L + +H YG +LD+ + LI +YS C + +R++FD
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + V W +M +GY Q+ + +EAL LF ++ + E PD T +M++ G +++LG
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ F GL+ N + NAL+DMY+KCGS DA + F + + VV W ++I+ A +
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD---DKGISYN 481
GE +AL + ++M + PN +TF+ VL AC+H G +E G + Q++ GI
Sbjct: 635 GEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG----LKQFELMLRFGI--E 688
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
PE +HY CM LLGR G+L +A + ++ MP K A +W +LL C N+E+ E+ A
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+P + + ++N YA G W +R MK V K PG+S IN + F +
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLS 808
Query: 602 EDRYHAESELTYPVLDCLALHSR 624
+D+ H ++ Y VLD L + R
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQIR 831
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 8/368 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQA-- 150
A K+F++M R++ SW+ M+ G E L +F R + + QA
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ + ++ + SF + G D DV V I Y K ++ A LVF + E+ + V
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK--STV 215
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+W +M++GC + SL + +M + D + ++LS+ L G+ +H+H
Sbjct: 216 TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ YG ++D S++N LI Y KCG + +A LF+G+ ++ +SWT ++SGY Q EA+
Sbjct: 276 LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAM 335
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF +M G PD+ S+++ C AL G Y L ++ V N+LIDMY
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG---EFVEALDLFHQLMELDLRPNRV 447
+KC + DAR++F VV + MI G + G E EAL++F + +RP+ +
Sbjct: 396 AKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLL 455
Query: 448 TFLAVLQA 455
TF+++L+A
Sbjct: 456 TFVSLLRA 463
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 306/601 (50%), Gaps = 18/601 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + +A K L LF +M ++I + T + K CA +L Q++H +
Sbjct: 298 WNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAI 357
Query: 82 K-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F+ C +D A K+F + DV SW+A++ Q G
Sbjct: 358 RIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAE 417
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR G+ + T+ L AA L +S+H+ G + D +VCN ++ Y
Sbjct: 418 VFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYM 477
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K ++ VF R ++SWN++++G + D L + M+ GF ++ T
Sbjct: 478 KIGSVQDGCRVFEATTNR--DLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTF 535
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+S+L S + G+ VH+ + D + V L+ MY+K ++ A +F+ +
Sbjct: 536 ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK 595
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R +WT +++GYAQ G ++A++ F M+ G P+ T+ S +SGC + L+ G+
Sbjct: 596 RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL 655
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ A G ++ V +AL+DMY+KCG + DA +F L + VSW T+I G + +G+
Sbjct: 656 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQG 715
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+AL F +++ P+ VTF+ VL AC+H G +E+G GI+ P ++HY
Sbjct: 716 GKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGIT--PTIEHY 773
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM D+LGR GK E F++ M + S+ IW T+L ACK+H NIE GE A LF+LEP
Sbjct: 774 ACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEP 833
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ Y+ ++N +A G WD V N+R +M VKK PG S +NG+ F + D H
Sbjct: 834 EIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHP 893
Query: 608 E 608
+
Sbjct: 894 K 894
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 243/524 (46%), Gaps = 24/524 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V + + LF +M++ +E N T+ KAC+ DL + + +H +
Sbjct: 197 WTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAI 256
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC + A ++F M ++ SWNA+L GFAQMG E VL
Sbjct: 257 KVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLN 316
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M I T+ + + ++ +L + VHS I IG + D + + Y+
Sbjct: 317 LFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYS 376
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC A VF IE+ VVSW++++ + ++ ++ M ++G + T+
Sbjct: 377 KCGLAGDALKVFVRIED--PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTL 434
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
SL+S+ L G +H+ YGF+ D +V N L++MY K G + +F+ +
Sbjct: 435 ASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTN 494
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R +SW A++SG+ D LR+F M A G P++ T +S++ C ++LGK
Sbjct: 495 RDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 554
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
L N V AL+DMY+K + DA +F L ++ + +WT ++AG A +G+
Sbjct: 555 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 614
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+A+ F Q+ ++PN T + L C+ L+ G Q I D +
Sbjct: 615 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGR-----QLHSMAIKAGQSGDMF 669
Query: 488 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G +++A + V + D W T++C H
Sbjct: 670 VASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQH 712
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 245/536 (45%), Gaps = 32/536 (5%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
+ CA DL + IHG ++KS + KC + A K+F E+ RDV
Sbjct: 136 RTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVV 195
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SW A++ GF G+ + LF MR G++A+ T +A L K VH+
Sbjct: 196 SWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEA 255
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
I +G +D+ V + + YAKC ++ +AE VF + ++ VSWN+++ G +
Sbjct: 256 IKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQ--NAVSWNALLNGFAQMGDAEK 313
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
LN + M + T+ ++L L G++VHS I G +LD + L+
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSKCG A +F I D VSW+A+I+ QKG EA +F M +G +P+ T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ S++S G L G+ C G + + VCNAL+ MY K GS+ D +F A
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ ++SW +++G N L +F+Q++ PN TF+++L++C+ ++ G
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553
Query: 468 I--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ I++ G + + + D+ + L++A + IK D W ++
Sbjct: 554 VHAQIVKNSLDGNDFVG-----TALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG 607
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV 581
+ GE C +++ P N++ L G + I T+ Q+
Sbjct: 608 ---YAQDGQGEKAVKCFIQMQREGVKP-----NEFTLASSLSGCSRIATLDSGRQL 655
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
M+ C G L GK G+ + + N+L+++Y+KCGS A ++F +PE+
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG----- 465
VVSWT +I G G A++LF ++ + N T+ L+AC+ LE G
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
AI + + D + S + DL + G++ A MP K +A W LL
Sbjct: 254 EAIKVGDFSDLFVG--------SALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALL 302
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 313/615 (50%), Gaps = 24/615 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V + + L LF +M++ + + ++ ++CA +S L + +H H +
Sbjct: 260 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 319
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K + L A + F + V + NAM+VG + G +
Sbjct: 320 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 379
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M I+ D V++ G+ A K + VH I G D D+ V N + Y
Sbjct: 380 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 439
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A L+F G++++ VSWN+++A +DD++ + M+ G + D T
Sbjct: 440 KCKALMEAYLIFQGMKQK--DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 497
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +L G +VH I G D V +T++ MY KCG ID A+ L D I
Sbjct: 498 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 557
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW A++SG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 558 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 617
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ D+ + + L+DMY+KCG + D+ +F + ++ VSW MI G AL+G
Sbjct: 618 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 677
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---WAISIIQYDDKGISYNPEL 484
VEAL +F ++ + ++ PN TF+AVL+AC+H G + G + + Y P+L
Sbjct: 678 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY-----KLEPQL 732
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+H++CM D+LGR +EA+ F+ SMP ++DA IW TLL CKI ++EI E A +
Sbjct: 733 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 792
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P ++ Y+ ++N YA G+W V+ R ++K+ ++KK PG S + + F D+
Sbjct: 793 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 852
Query: 605 YHAESELTYPVLDCL 619
H S Y +L+ L
Sbjct: 853 AHPRSGELYEMLNDL 867
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 244/532 (45%), Gaps = 31/532 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + + +++ LF +M + + P+ TF + K+C+ L +L +H V
Sbjct: 159 WNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 218
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC LD A F M R+ SW A + G Q L
Sbjct: 219 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 278
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ +G+ + ++ L+ + +H+ I +D V + YA
Sbjct: 279 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 338
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + L A F G+ TV + N+M+ G +++ ++ M+ + R DV ++
Sbjct: 339 KANSLTDARRAFFGLPN--HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 396
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ S+ + QG+ VH I GFD+D+ V N ++ +Y KC + A ++F G+
Sbjct: 397 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 456
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW A+I+ Q G D+ + F M G PD T S++ C +LE G
Sbjct: 457 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 516
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ GL + V + ++DMY KCG I +A++L + + VVSW +++G +LN E
Sbjct: 517 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 576
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQ---YDDKGISYNP 482
EA F +++++ L+P+ TF VL C + +E G I II+ DD+ IS
Sbjct: 577 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS--- 633
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-LNIE 533
S + D+ + G + ++L + + K D W ++C +H L +E
Sbjct: 634 -----STLVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHGLGVE 679
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 180/378 (47%), Gaps = 2/378 (0%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ A +FD M DV SWNA++ G+ Q G + + LF M G+ D T L ++
Sbjct: 141 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 200
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ LSL VH+ + G++ DV + + Y KC L A F G+ ER V
Sbjct: 201 CSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER--NWV 258
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW + +AGC +++ L + M G + + S S L GR +H+H
Sbjct: 259 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 318
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
I F D V ++ +Y+K + AR F G+ + T + AM+ G + G EA+
Sbjct: 319 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 378
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M + D+V++ + S C ++ G+ A G ++ V NA++D+Y
Sbjct: 379 GLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLY 438
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KC ++ +A +F + +K VSW +IA NG + + + F++++ ++P+ T+
Sbjct: 439 GKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYG 498
Query: 451 AVLQACTHTGFLEKGWAI 468
+VL+AC LE G +
Sbjct: 499 SVLKACAALRSLEYGLMV 516
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 157/346 (45%), Gaps = 6/346 (1%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT +++Y+ D+ A +F G+ + VVSWN++V+G F +S++ + M G
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDP--DVVSWNALVSGYCQRGMFQESVDLFVEMARRG 186
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D TT LL S E L G VH+ + G ++DV + L+ MY KC +D A
Sbjct: 187 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 246
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F G+ +R VSW A I+G Q L LF M+ G + S C
Sbjct: 247 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 306
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
L G+ +A + +V A++D+Y+K S+ DAR F+ LP V + M+
Sbjct: 307 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 366
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G G +EA+ LF ++ +R + V+ V AC T +G + +
Sbjct: 367 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS---G 423
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
++ ++ + + DL G+ L EA Q M K D+ W ++ A
Sbjct: 424 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAA 468
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 195/425 (45%), Gaps = 22/425 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ N+ + V + + LF+ M ++ I + ++ + ACA+ Q +H
Sbjct: 357 TVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 416
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+KS F KC L AY IF M +D SWNA++ Q G +
Sbjct: 417 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 476
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ + F M G++ D T + +A + L VH I G+ +D V +T +
Sbjct: 477 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 536
Query: 184 SSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
Y KC + A+ + +R+ + VVSWN++++G + + +++ F+ M+ G +
Sbjct: 537 DMYCKCGIIDEAQ----KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 592
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T ++L + + G+ +H I D + +TL+ MY+KCGD+ + ++
Sbjct: 593 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 652
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + R VSW AMI GYA G EALR+F M+ +P+ T ++++ C G
Sbjct: 653 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 712
Query: 362 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
+ G ++F L+ + ++D+ + +A + ++P + V W T+++
Sbjct: 713 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
Query: 420 GCALN 424
C +
Sbjct: 773 ICKIR 777
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 102/223 (45%), Gaps = 31/223 (13%)
Query: 274 GFDLDVSVINTLISM-------------------------------YSKCGDIDSARVLF 302
GF V N L+ M YS GDI +A LF
Sbjct: 89 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 148
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DG+ D VSW A++SGY Q+G E++ LF M G PD T ++ C L
Sbjct: 149 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 208
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
LG A GL+ +V +AL+DMY KC S+ DA FY +PE+ VSW IAGC
Sbjct: 209 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 268
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
N ++V L+LF ++ L L ++ ++ + ++C L G
Sbjct: 269 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 311
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 85/219 (38%), Gaps = 41/219 (18%)
Query: 343 PDLVTVLSMISGCGQSG--ALELGKWFDNYACSGGLKDNVMVCNALIDM----------- 389
P VT + C Q+G AL G+ G V N L+ M
Sbjct: 55 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 114
Query: 390 --------------------YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
YS G I A LF +P+ VVSW +++G G F E
Sbjct: 115 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 174
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD--HY 487
++DLF ++ + P+R TF +L++C+ L G +Q + E+D
Sbjct: 175 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG-----VQVHALAVKTGLEIDVRTG 229
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
S + D+ G+ L +AL F MP ++ WG + C
Sbjct: 230 SALVDMYGKCRSLDDALCFFYGMPERNWVS-WGAAIAGC 267
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 197/569 (34%), Positives = 295/569 (51%), Gaps = 33/569 (5%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG--IQADFVTVMGLT 148
LD +F MA RD S+NA++ GF+ G +RL++ + G ++ +T+ +
Sbjct: 88 LDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMV 147
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--------- 199
AA +L + H + +G + V + + YAK + A+ VF
Sbjct: 148 MAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVV 207
Query: 200 -----------CGIEERLRTV---------VSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
C + E R + ++W +MV G T +LNF+R M + G
Sbjct: 208 MYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQG 267
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+D T S+L++ AL QG+ +H++ I +D +V V + L+ MYSKC I A
Sbjct: 268 IAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAE 327
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F + + +SWTA+I GY Q G +EA+R+F M+ G PD T+ S+IS C
Sbjct: 328 TAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLA 387
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+LE G F A GL + V NAL+ +Y KCGSI DA LF + VSWT ++
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVT 447
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A G E +DLF +++ D++P+ VTF+ VL AC+ GF+EKG + D GI
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIV 507
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P DHY+CM DL R G+LKEA +F++ MP+ DA WGTLL AC++ ++EIG++ A
Sbjct: 508 --PIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAA 565
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L +++P + A YV + + +A G W+ VA +R M+ QVKK PG S K F
Sbjct: 566 ENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIF 625
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAY 628
+A+D+ H S+ Y L+ L EE Y
Sbjct: 626 SADDQSHPFSKGIYEKLEWLNSKMLEEGY 654
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 184/376 (48%), Gaps = 14/376 (3%)
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
++Y+ MI G ++C ++ A ++F+ M RD +W M+ GF Q G L F
Sbjct: 207 VMYNTMITG------LLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFF 260
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
MR GI D T + A L K +H++ I D +V V + + Y+KC
Sbjct: 261 RRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKC 320
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
+K AE F + + ++SW +++ G ++++ + M +G D T+ S
Sbjct: 321 RSIKPAETAFRRMS--CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGS 378
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
++SS +L +G H + G ++V N L+++Y KCG I+ A LFD +
Sbjct: 379 VISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHD 438
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFD 368
+VSWTA+++GYAQ G E + LF M A PD VT + ++S C ++G +E G +F
Sbjct: 439 QVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFH 498
Query: 369 NYACSGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
+ G+ D+ C +ID+YS+ G + +A E +P + W T+++ C L G
Sbjct: 499 SMQKDHGIVPIDDHYTC--MIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556
Query: 426 EFVEALDLFHQLMELD 441
+ L+E+D
Sbjct: 557 DMEIGQWAAENLLEID 572
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 144/360 (40%), Gaps = 51/360 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + L FR+M+ I + TF I AC LS L + IH +I+
Sbjct: 240 WTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A F M+ +++ SW A++VG+ Q G E +R
Sbjct: 300 RTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVR 359
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ GI D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 360 VFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYG 419
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F E VSW ++V G + ++++ + M+ + D T
Sbjct: 420 KCGSIEDAHRLF--DEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTF 477
Query: 248 VSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +LS+ C A V+ + H + D V D
Sbjct: 478 IGVLSA--CSRAGFVEKGCSYFHSMQK----------------------DHGIVPIDD-- 511
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+T MI Y++ G L EA M PD + +++S C G +E+G+W
Sbjct: 512 -----HYTCMIDLYSRSGRLKEAEEFIKQMPMH---PDAIGWGTLLSACRLRGDMEIGQW 563
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE- 341
N L+S + +D LF + R VS+ A+I+G++ G A+RL+ + AG
Sbjct: 76 NALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSS 135
Query: 342 -LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD-- 398
P +T+ +M+ G LG+ F G N V + L+ MY+K G IGD
Sbjct: 136 VRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAK 195
Query: 399 -----------------------------ARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
AR LF + ++ ++WTTM+ G NG +
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQ--YDDKGISYNPELD 485
AL+ F ++ + ++ TF ++L AC LE+G I II+ YDD + +D
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315
Query: 486 HYS 488
YS
Sbjct: 316 MYS 318
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 5 SLPPRLNRIYRSSTIN--QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
S+ P R S N W + I + + + +F +M+++ I+P++ T +
Sbjct: 322 SIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVIS 381
Query: 63 ACAKLSDL----------IYSQMIHGHIVKSPFV----KCDRLDCAYKIFDEMAVRDVAS 108
+CA L+ L + S ++H V + V KC ++ A+++FDEM D S
Sbjct: 382 SCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVS 441
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSVH 164
W A++ G+AQ G + + LF M ++ D VT +G+ A A K S S+
Sbjct: 442 WTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQ 501
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ +D D C I Y++ LK AE F + W ++++ C
Sbjct: 502 KDHGIVPID-DHYTC--MIDLYSRSGRLKEAE-EFIKQMPMHPDAIGWGTLLSAC 552
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
N+ NAL+ + + D LF ++ ++ VS+ +IAG + G A+ L+H L+
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 439 EL--DLRPNRVTFLAVLQACTHTG 460
+RP+R+T A++ A + G
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALG 154
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 313/584 (53%), Gaps = 18/584 (3%)
Query: 57 FPFIAKACAKLSDL--IYSQMIHGHIVKSP---FVKCDRLDCAYK--IFDEMAVRDVASW 109
F + + C + L I++Q++ I K + D D AY F + S+
Sbjct: 35 FNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSF 94
Query: 110 NAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
N M+ G + ++ FY+ M+ +G++ + +T L A + + + H I
Sbjct: 95 NVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVI 154
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
G+D D V ++ I+ YA+C + A VF I ++ +VSWNSM++G + ++
Sbjct: 155 RRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQK--DLVSWNSMISGYSKMRHAGEA 212
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLI 286
+ +R MM GF+ + ++VS+L + C E L G V + L+ + + LI
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGA--CGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY KCGD+ SAR +FD + + +V+W AMI+GYAQ G +EA++LF M + PD +
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQI 330
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++ ++S C GAL+LGK + YA G +D+V V AL+DMY+KCGS+ +A +FY +
Sbjct: 331 TLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM 390
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNRVTFLAVLQACTHTGFLEK 464
P+K VSW MI+ A +G+ EAL LF +M + PN +TF+ VL AC H G +++
Sbjct: 391 PKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDE 450
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G + + G+ P+++HYSCM DL R G L+EA DFV +MP K D I G LL
Sbjct: 451 GRRLFHMMSSSFGLV--PKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLG 508
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
AC+ NI+I E V L +LEP ++ YV + YA RWD A +R +MK+ V K
Sbjct: 509 ACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKT 568
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
PG S IN + F A D H E + +LD L R E Y
Sbjct: 569 PGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGY 612
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 201/394 (51%), Gaps = 19/394 (4%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH-----------GHIV 81
N++ L + +MK ++PNNLT+PF+ AC+ L + +M H GH+
Sbjct: 106 NKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVS 165
Query: 82 KS---PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
S + +C ++ A K+FDE++ +D+ SWN+M+ G+++M + LF M G Q
Sbjct: 166 HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ ++++ + A L L V F + + + + + I Y KC DL A +
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRI 285
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F ++++ + V+WN+M+ G ++++ ++ M + D T++ +LS+
Sbjct: 286 FDSMKKKDK--VTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIG 343
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL G+ V + GF DV V L+ MY+KCG +D+A +F G+ + VSW AMIS
Sbjct: 344 ALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMIS 403
Query: 319 GYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGG 375
A G EAL LF +M E P+ +T + ++S C +G ++ G + F + S G
Sbjct: 404 ALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFG 463
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
L + + ++D++S+ G + +A + +PEK
Sbjct: 464 LVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 140/294 (47%), Gaps = 19/294 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------I 71
WNS I A + + LFR+M + +PN ++ + AC +L DL +
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 72 YSQMIHGHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++M + + S + KC L A +IFD M +D +WNAM+ G+AQ G E ++
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +MR+ D +T++G+ A L L K V + G DV V + YA
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT-- 245
KC L A VF G+ + + VSWN+M++ + + ++L ++ MM G +
Sbjct: 376 KCGSLDNAFRVFYGMPK--KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDI 433
Query: 246 TVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T V +LS+ V + +G RL H +G + + ++ ++S+ G ++ A
Sbjct: 434 TFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 195/629 (31%), Positives = 314/629 (49%), Gaps = 24/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + L ++ + + + P+ T + AC L + +HG I
Sbjct: 190 WNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + K +RL A ++F +MAV+D +WN M+ G+AQ+G E ++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M + G D +++ +A + L + K VH + I G + D CN I YA
Sbjct: 310 LFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A+ VF + + V+WNS++ G T + + L ++ MM + D T
Sbjct: 369 KCGDLLAAQEVF--DTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTF 425
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V LLS F + QGR +H I +GF+ ++ + N+L+ +Y+KCG++D +F +
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+SW +I+ D ++ M G +PD TVL ++ C GK
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y G + NV + NALI+MYSKCGS+ + ++F + EK VV+WT +I+ + GE
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELD 485
+AL F + + P+ V F+A + AC+H+G +++G +D YN P ++
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRF----FDRMKTDYNLEPRME 661
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ DLL R G L +A +F+ SMP+K DA +WG LL AC+ N I + V+ + +L
Sbjct: 662 HYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILEL 721
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
YV ++N YA G+WD V +R MK +KK PG S I + F D+
Sbjct: 722 NSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKS 781
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
+ + +L+ L +E Y + L++
Sbjct: 782 FEQYDKVKDLLEYLVRLMAKEGYVADLQF 810
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 230/470 (48%), Gaps = 18/470 (3%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I ++ + WNS IR + + L + +M++ ++P+ TFP + +CA++ DL
Sbjct: 80 ISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLEL 139
Query: 73 SQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++H H ++ F + LD A +F+EM+ RD SWN+++ G+
Sbjct: 140 GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCS 199
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
GF E+ L +++ R+ G+ D T+ + A + +VH IG+ DV +
Sbjct: 200 NGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVII 259
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N +S Y K + L+ A VF + ++ V+WN+M+ G + + S+ + M+ +
Sbjct: 260 GNGLLSMYFKFERLREARRVFSKMA--VKDSVTWNTMICGYAQLGRHEASVKLFMDMI-D 316
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
GF D+ ++ S + + L G+ VH + I GF+ D N LI MY+KCGD+ +A
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ +FD + V+W ++I+GY Q G E L F M+ + PD VT + ++S Q
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQL 435
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
+ G+ G + +++ N+L+D+Y+KCG + D ++F + ++SW T+I
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A + + +++ L P+ T L +L C+ +G I
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 182/372 (48%), Gaps = 10/372 (2%)
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
AK+ L++VHS I G+ V IS YA+ D + VF I V WN
Sbjct: 32 AKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT-NNVYLWN 90
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
S++ T+ F +L +Y M + D T S+++S L G +VH H +
Sbjct: 91 SIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEM 150
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GF+ D+ + N LI MYS+ D+D+AR +F+ + +R VSW ++ISGY G ++AL ++
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
G +PD T+ S++ CG A++ G G+ +V++ N L+ MY K
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ +AR +F + K V+W TMI G A G ++ LF +++ P+ ++ + +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMP 511
+AC +G L+ G + +Y I E D +C + D+ + G L A + +
Sbjct: 330 RACGQSGDLQVGKFVH--KY---LIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK 384
Query: 512 IKSDAGIWGTLL 523
K D+ W +L+
Sbjct: 385 CK-DSVTWNSLI 395
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
SLL + + Q R VHS I G L V LIS Y++ D S+ +F I
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 309 TRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
V W ++I G +AL + M PD T S+I+ C + LELG
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+A G + ++ + NALIDMYS+ + +AR +F + + VSW ++I+G NG +
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+ALD++H+ + P+ T +VL AC +++G A+ + + GI+ + + +
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGV-IEKIGIAGDVIIGN- 261
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + + +L+EA M +K D+ W T++C
Sbjct: 262 -GLLSMYFKFERLREARRVFSKMAVK-DSVTWNTMICG 297
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 301/586 (51%), Gaps = 42/586 (7%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLT 148
LD A +FD++ ++ +WN ++ +A +F ++ + + F T +
Sbjct: 75 LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKF-TFPFVI 133
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
+AA K + +VH I + D+ + N+ + Y C DL MAE +F GI +
Sbjct: 134 KAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGIS--CKD 191
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
VVSWNSM++ G+ +D+L + M + T+V +LS+ L GR V S
Sbjct: 192 VVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCS 251
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ G +D+++ N ++ MY+KCG +D A+ LFD + +R SWT M+ GYA+ GD D
Sbjct: 252 YIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDA 311
Query: 329 ALRLFFAMEAA-------------------------GEL-------PDLVTVLSMISGCG 356
A +F AM EL PD VT++S +S C
Sbjct: 312 ARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACA 371
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
Q GA++LG W Y G+ N + ++L+DMY+KCGS+ A E+FY++ E+ V W+
Sbjct: 372 QLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSA 431
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
MIAG ++G A+DLF ++ E ++PN VTF VL AC+H G +++G
Sbjct: 432 MIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVY 491
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
G+ PE+ HY+CM D+LGR G L+EA++ + M A +WG LL AC +H+N+E+GE
Sbjct: 492 GVV--PEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGE 549
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
+ L KLEP + V ++N YA GRW+ V+ +R +M+ ++KK PG S NG
Sbjct: 550 LASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNV 609
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYS---SHLKWIPEHE 639
F D H S Y L+ +A + Y SHL + E +
Sbjct: 610 HEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEED 655
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 213/472 (45%), Gaps = 53/472 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WN+ IR + ++ ++ ++F + K D+ PN TFPF+ KA ++L +HG
Sbjct: 93 WNTLIRAYASSSDPFQSFVIFLDLLDKCEDL-PNKFTFPFVIKAASELKASRVGTAVHGM 151
Query: 80 IVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+K F C L A ++F ++ +DV SWN+M+ FAQ E+
Sbjct: 152 AIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDA 211
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L LF M + + VT++G+ A L + V S+ G+ D+++CN +
Sbjct: 212 LELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDM 271
Query: 186 YAKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMV 216
Y KC + A+ +F + ER ++ + +WN ++
Sbjct: 272 YTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLI 331
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+ K ++L + + + + D T+VS LS+ A+ G +H + G
Sbjct: 332 SAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGI 391
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
L+ +I++L+ MY+KCG ++ A +F + +R W+AMI+G G A+ LFF
Sbjct: 392 VLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFE 451
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M+ A P+ VT +++ C +G ++ G+ +F G+ + ++D+ + G
Sbjct: 452 MQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAG 511
Query: 395 SIGDARELFYALPEKIVVS-WTTMIAGCAL--NGEFVEALDLFHQLMELDLR 443
+ +A EL + S W ++ C+L N E E QL++L+ R
Sbjct: 512 FLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELAS--DQLLKLEPR 561
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 117/266 (43%), Gaps = 9/266 (3%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLI--SMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
Q + VH+ + G D + L S S +D AR LFD I +W +I
Sbjct: 40 QLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRA 99
Query: 320 YAQKGDLDEALRLFF-AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
YA D ++ +F ++ +LP+ T +I + A +G A
Sbjct: 100 YASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGM 159
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ + N+L+ Y CG + A LF + K VVSW +MI+ A +AL+LF ++
Sbjct: 160 DLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKME 219
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
++ PN VT + VL AC LE G W S I+ KGI +L + M D+ +
Sbjct: 220 RENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIER--KGIKV--DLTLCNAMLDMYTKC 275
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLL 523
G + +A MP + D W +L
Sbjct: 276 GSVDDAQKLFDEMP-ERDVFSWTIML 300
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 152/361 (42%), Gaps = 50/361 (13%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
S+ RL + + WNS I N L LF +M++ ++ PN++T + AC
Sbjct: 178 SMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSAC 237
Query: 65 AKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWN 110
AK DL + + + +I + + KC +D A K+FDEM RDV SW
Sbjct: 238 AKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWT 297
Query: 111 AMLVGFAQMG--------------------------FLEN-----VLRLFYNMRLVGI-Q 138
ML G+A+MG + +N L +F ++L I +
Sbjct: 298 IMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAK 357
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D VT++ A + L +H + G+ + + ++ + YAKC L+ A V
Sbjct: 358 PDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEV 417
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F +EE R V W++M+AG + +++ + M + + T ++L +
Sbjct: 418 FYSVEE--RDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAG 475
Query: 259 ALVQGRL-VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAM 316
+ +GR+ H YG ++ ++ + + G ++ A L + + S W A+
Sbjct: 476 LVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGAL 535
Query: 317 I 317
+
Sbjct: 536 L 536
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 198/610 (32%), Positives = 312/610 (51%), Gaps = 20/610 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + L L+ +M I P+ TFP + + C L DL + +H H++
Sbjct: 163 WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI 222
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F VKC + A +FD M RD SWNAM+ G+ + LR
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ MR + D +T+ + A L + VH + I G A+VSV N+ I ++
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHS 342
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
AE+VF +E + +VSW +M++G + ++ Y M + G D T+
Sbjct: 343 SVGCWDEAEMVFSKME--FKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ L +G ++H G V V N+LI MYSKC ID A +F I +
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SWT++I G EAL FF P+ VT++S++S C + GAL GK
Sbjct: 461 KNVISWTSIILGLRLNYRSFEAL-FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+A GL + + NAL+DMY +CG + A F + EK V SW ++ G A G+
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKG 578
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
A++LFH+++E D+ P+ +TF ++L AC+ +G + G + + + P L HY
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDG--LEYFESMEHKFHIAPNLKHY 636
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+ + DLLGR G+L++A +F++ MPI D IWG LL AC+I+ N+E+GE A +F+++
Sbjct: 637 ASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDT 696
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
S Y+ + N YA G+WD VA +R +M+ N++ PG S + G+ F D +H
Sbjct: 697 KSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHP 756
Query: 608 ESELTYPVLD 617
+ + VL+
Sbjct: 757 QIKEINAVLE 766
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 260/522 (49%), Gaps = 22/522 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S T NS I E K + K L+ M++ + T+ + + C
Sbjct: 56 SITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSR 115
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H ++ K S FV+ L A+ +F +MA RD+ SWN ++ G+A+ G+
Sbjct: 116 VHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGY 175
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ L L++ M VGI+ D T + + L+ + VH I G ++DV V N
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I+ Y KC D+ A LVF + R R +SWN+M++G D + L + M
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRRDR--ISWNAMISGYFENDVCLEGLRLFFMMREFFVD 293
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D+ T+ S++S+ GR VH + I GF +VSV N+LI M+S G D A ++
Sbjct: 294 PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMV 353
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + + VSWTAMISGY + G ++A+ + ME G +PD +T+ S++S C G L
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ G +A GL V+V N+LIDMYSKC I A E+F+ +P K V+SWT++I G
Sbjct: 414 DKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL 473
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
LN EAL F Q++ L L+PN VT ++VL AC G L G I G+ ++
Sbjct: 474 RLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIH-AHALRTGLGFD 531
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
L + + D+ R G+++ A + Q + D W LL
Sbjct: 532 GFLP--NALLDMYVRCGRMEPAWN--QFNSCEKDVASWNILL 569
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 201/671 (29%), Positives = 319/671 (47%), Gaps = 102/671 (15%)
Query: 13 IYRSSTINQWN----SQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+ R N W + R + N H L++ M N + +N T+P + +AC+
Sbjct: 168 LMRYPQANTWKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRR 227
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
++ +H H++K + F C + A ++F+E +V D SWN++L
Sbjct: 228 SEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILA 287
Query: 115 GFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
G+ ++G +E +++ M R + + + G+ + A L
Sbjct: 288 GYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKL--------------- 332
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNF 231
+E L + +V+W++++A + +++++
Sbjct: 333 -----------------------------FDEMLEKDMVTWSALIACFQQNEMYEEAIRT 363
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALV--QGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M G +D VS LS+ C LV G+L+HS + G + +++ N LI MY
Sbjct: 364 FVGMHKIGVMVDEVVAVSALSA--CANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMY 421
Query: 290 SKCGDI-------------------------------DSARVLFDGICDRTRVSWTAMIS 318
SKCGDI D+A+ +FD + ++ VSW++MIS
Sbjct: 422 SKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMIS 481
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GYAQ DE L LF M+ +G PD T++S+IS C + ALE GKW Y GL
Sbjct: 482 GYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTI 541
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
NV++ LIDMY KCG + A E+FY + EK + +W +I G A+NG +LD+F +
Sbjct: 542 NVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 601
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ + PN +TF+ VL AC H G +++G D I P + HY CM DLLGR G
Sbjct: 602 KCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKI--QPNVKHYGCMVDLLGRAG 659
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
KL+EA + + MP+ D WG LL ACK H + E+G V L +L+P +V ++N
Sbjct: 660 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 719
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDC 618
YA G+WD V IR MM +++V K PG S+ NG F A D+ H + + +L
Sbjct: 720 IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVE 779
Query: 619 LALHSREEAYS 629
+A+ + E Y+
Sbjct: 780 MAMKLKLEGYT 790
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 313/615 (50%), Gaps = 24/615 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V + + L LF +M++ + + ++ ++CA +S L + +H H +
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K + L A + F + V + NAM+VG + G +
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M I+ D V++ G+ A K + VH I G D D+ V N + Y
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A L+F G++++ VSWN+++A +DD++ + M+ G + D T
Sbjct: 398 KCKALMEAYLIFQGMKQK--DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 455
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +L G +VH I G D V +T++ MY KCG ID A+ L D I
Sbjct: 456 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 515
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW A++SG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 516 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 575
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ D+ + + L+DMY+KCG + D+ +F + ++ VSW MI G AL+G
Sbjct: 576 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 635
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---WAISIIQYDDKGISYNPEL 484
VEAL +F ++ + ++ PN TF+AVL+AC+H G + G + + Y P+L
Sbjct: 636 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY-----KLEPQL 690
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+H++CM D+LGR +EA+ F+ SMP ++DA IW TLL CKI ++EI E A +
Sbjct: 691 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 750
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P ++ Y+ ++N YA G+W V+ R ++K+ ++KK PG S + + F D+
Sbjct: 751 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 810
Query: 605 YHAESELTYPVLDCL 619
H S Y +L+ L
Sbjct: 811 AHPRSGELYEMLNDL 825
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 244/532 (45%), Gaps = 31/532 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + + +++ LF +M + + P+ TF + K+C+ L +L +H V
Sbjct: 117 WNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 176
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC LD A F M R+ SW A + G Q L
Sbjct: 177 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 236
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ +G+ + ++ L+ + +H+ I +D V + YA
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + L A F G+ TV + N+M+ G +++ ++ M+ + R DV ++
Sbjct: 297 KANSLTDARRAFFGLPN--HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ S+ + QG+ VH I GFD+D+ V N ++ +Y KC + A ++F G+
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW A+I+ Q G D+ + F M G PD T S++ C +LE G
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ GL + V + ++DMY KCG I +A++L + + VVSW +++G +LN E
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 534
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQ---YDDKGISYNP 482
EA F +++++ L+P+ TF VL C + +E G I II+ DD+ IS
Sbjct: 535 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS--- 591
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-LNIE 533
S + D+ + G + ++L + + K D W ++C +H L +E
Sbjct: 592 -----STLVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHGLGVE 637
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 180/378 (47%), Gaps = 2/378 (0%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ A +FD M DV SWNA++ G+ Q G + + LF M G+ D T L ++
Sbjct: 99 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 158
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ LSL VH+ + G++ DV + + Y KC L A F G+ ER V
Sbjct: 159 CSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER--NWV 216
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW + +AGC +++ L + M G + + S S L GR +H+H
Sbjct: 217 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
I F D V ++ +Y+K + AR F G+ + T + AM+ G + G EA+
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M + D+V++ + S C ++ G+ A G ++ V NA++D+Y
Sbjct: 337 GLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLY 396
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KC ++ +A +F + +K VSW +IA NG + + + F++++ ++P+ T+
Sbjct: 397 GKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYG 456
Query: 451 AVLQACTHTGFLEKGWAI 468
+VL+AC LE G +
Sbjct: 457 SVLKACAALRSLEYGLMV 474
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 157/346 (45%), Gaps = 6/346 (1%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT +++Y+ D+ A +F G+ + VVSWN++V+G F +S++ + M G
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDP--DVVSWNALVSGYCQRGMFQESVDLFVEMARRG 144
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D TT LL S E L G VH+ + G ++DV + L+ MY KC +D A
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F G+ +R VSW A I+G Q L LF M+ G + S C
Sbjct: 205 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
L G+ +A + +V A++D+Y+K S+ DAR F+ LP V + M+
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 324
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G G +EA+ LF ++ +R + V+ V AC T +G + +
Sbjct: 325 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS---G 381
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
++ ++ + + DL G+ L EA Q M K D+ W ++ A
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAA 426
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 195/424 (45%), Gaps = 22/424 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ N+ + V + + LF+ M ++ I + ++ + ACA+ Q +H
Sbjct: 315 TVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 374
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+KS F KC L AY IF M +D SWNA++ Q G +
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ + F M G++ D T + +A + L VH I G+ +D V +T +
Sbjct: 435 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 494
Query: 184 SSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
Y KC + A+ + +R+ + VVSWN++++G + + +++ F+ M+ G +
Sbjct: 495 DMYCKCGIIDEAQ----KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T ++L + + G+ +H I D + +TL+ MY+KCGD+ + ++
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + R VSW AMI GYA G EALR+F M+ +P+ T ++++ C G
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 362 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
+ G ++F L+ + ++D+ + +A + ++P + V W T+++
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 420 GCAL 423
C +
Sbjct: 731 ICKI 734
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 102/223 (45%), Gaps = 31/223 (13%)
Query: 274 GFDLDVSVINTLISM-------------------------------YSKCGDIDSARVLF 302
GF V N L+ M YS GDI +A LF
Sbjct: 47 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DG+ D VSW A++SGY Q+G E++ LF M G PD T ++ C L
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
LG A GL+ +V +AL+DMY KC S+ DA FY +PE+ VSW IAGC
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
N ++V L+LF ++ L L ++ ++ + ++C L G
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 269
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 85/219 (38%), Gaps = 41/219 (18%)
Query: 343 PDLVTVLSMISGCGQSG--ALELGKWFDNYACSGGLKDNVMVCNALIDM----------- 389
P VT + C Q+G AL G+ G V N L+ M
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 390 --------------------YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
YS G I A LF +P+ VVSW +++G G F E
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD--HY 487
++DLF ++ + P+R TF +L++C+ L G +Q + E+D
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG-----VQVHALAVKTGLEIDVRTG 187
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
S + D+ G+ L +AL F MP ++ WG + C
Sbjct: 188 SALVDMYGKCRSLDDALCFFYGMPERNWVS-WGAAIAGC 225
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/572 (34%), Positives = 301/572 (52%), Gaps = 24/572 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFV 86
+ R PN+ T +AC L +L +HG VK S +
Sbjct: 202 MVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYT 261
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KCD + A +F E+ +D+ SW +++ + + G E + LF M G+Q D V +
Sbjct: 262 KCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISC 321
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L + + K+ H+ + V + N IS YAKC + +A VF + +R
Sbjct: 322 LLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQR- 380
Query: 207 RTVVSWNSMV-AGCTYGDKFDDSLNFYRHMMY---NGFRLDVTTVVSLLSSFVCPEALVQ 262
SW+SMV A C G L YR M + + F D +++S++SS L
Sbjct: 381 -DTDSWSSMVVAYCKAGLDLK-CLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL 438
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ H + I + + SV N LISMY +CG+ D AR +F + + V+W+A+IS Y+
Sbjct: 439 GQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSH 498
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +AL L+ M G P+ T++S+IS C ALE G+ ++ GL+ ++ +
Sbjct: 499 LGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSI 558
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
C AL+DMY KCG +G AR++F ++ E+ VV+W MI+G ++GE ++AL LF + ++
Sbjct: 559 CTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNV 618
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+PN +TFLA+L AC H G ++KG + + S P L HY+CM DLLG+ G L+E
Sbjct: 619 KPNSLTFLAILSACCHAGLVDKGRELFTRMEE---YSLEPNLKHYACMVDLLGKSGHLQE 675
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A D V +MPI+ D GIWGTLL ACK+H N E+G VA F +P + Y+ M+N Y
Sbjct: 676 AEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGS 735
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
+W+ + +R MMK + V+K G S I G
Sbjct: 736 AEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 247/532 (46%), Gaps = 30/532 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS +R ++ TL R+M+ + P+ T P +A A A+L L +H + V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 82 KSP-----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG---- 120
+ + +C + A ++FDEM RDV +W A++ G G
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L ++R+ + G + + T+ +A LS+ +H FG+ GV SV +
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVS 254
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ S Y KCD + A ++F + E + +VSW S++ + ++ + M +G
Sbjct: 255 SLFSMYTKCDSTEDARILFPELPE--KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGL 312
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D + LL+ + G+ H+ + F V + N LISMY+KC +D A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP---DLVTVLSMISGCGQ 357
+F + R SW++M+ Y + G + L L+ M+ + D +++S+IS C +
Sbjct: 373 VFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G L LG+ Y+ +N V NALI MY +CG+ AR++F + K VV+W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+ + G +AL L+ Q++ ++PN T ++V+ +C + LE G +I K
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG---ELIHSHVKD 549
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ +L + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 15/235 (6%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ ++ + W++ I + + LLL+ QM ++PN+ T + +CA L+ L +
Sbjct: 480 MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEH 539
Query: 73 SQMIHGHI--------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++IH H+ + ++KC +L A K+FD M RDV +WN M+ G+
Sbjct: 540 GELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGM 599
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G L+LF M ++ + +T + + A HA + + + + ++ ++
Sbjct: 600 HGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKH 659
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ K L+ AE V + + W +++ C D F+ L +
Sbjct: 660 YACMVDLLGKSGHLQEAEDVVSAMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAK 713
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 305/590 (51%), Gaps = 28/590 (4%)
Query: 40 LLFRQMKQ-----NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------- 85
L+F+Q+ + + + TFPF+ KACAKL L + +H HI+ + F
Sbjct: 9 LIFKQIPSLSSHTSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTA 68
Query: 86 -----VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
KC A +FD+M ++ + SWN+++ + ++ + M+L+G++
Sbjct: 69 LVDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELS 128
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T G + + LS +H + +G+D + + N+ +S Y + + + A VF
Sbjct: 129 SATFTGFLASCSLPQGLS----IHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFY 184
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ ++ ++VSW ++ G + M D V+L+S L
Sbjct: 185 TLHQK--SIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNL 242
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+ LVHS + GFD + N L++MY+KC D+ SAR +FD + +++ WT+MISGY
Sbjct: 243 LLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGY 302
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
AQ G +EAL LF + P+ +T+ +++S C + G+L +G+ + Y GL ++
Sbjct: 303 AQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDL 362
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-E 439
V +LI M+ KCGSI A+ LF +P K + W+ MI G A++G EAL+LFH++ E
Sbjct: 363 RVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNE 422
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+ ++P+ + + +VL AC+H+G +E G D GI P + HYSC+ DLLGR G
Sbjct: 423 VGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGI--EPSIQHYSCLVDLLGRAGY 480
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
++ AL +Q MP+ A +W L AC H N+E+GE+ A LF LEP S +V M N
Sbjct: 481 VELALRTIQEMPVLVQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNL 540
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAES 609
Y G+W A R+++ + K PG S I+G AE + H ES
Sbjct: 541 YTSMGKWKEAAKARSIINARGLVKEPGWSQIEIDGAVHVLAAEGQSHLES 590
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 144/327 (44%), Gaps = 37/327 (11%)
Query: 2 AVSSLPPRLNRI---------YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP 52
++ S+ RLN+I +I W + ++ + K +F QM+ + P
Sbjct: 165 SIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGP 224
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIF 98
+++ F + C +L+ + ++H ++KS F KC L A ++F
Sbjct: 225 DSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVF 284
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D + + V W +M+ G+AQ G+ L LF + + + +T+ + A L
Sbjct: 285 DAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLR 344
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMV 216
+ + + + + G+ +D+ V + I + KC +K A+ +F ER+ + + W++M+
Sbjct: 345 MGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALF----ERIPNKDLAVWSAMI 400
Query: 217 AGCTYGDKFDDSLNFYRHMMYN--GFRLDVTTVVSLLSSFVCPEA-LVQGRLVHSHGIHY 273
G ++LN + H M N G + D S+L C + L++ L + +
Sbjct: 401 NGYAVHGMGKEALNLF-HKMQNEVGIKPDAIVYTSVL--LACSHSGLIEDGLKYFRSMQK 457
Query: 274 GFDLDVSV--INTLISMYSKCGDIDSA 298
F ++ S+ + L+ + + G ++ A
Sbjct: 458 DFGIEPSIQHYSCLVDLLGRAGYVELA 484
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 293/527 (55%), Gaps = 19/527 (3%)
Query: 112 MLVGFAQMGFLENVLRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
M+ GF + E+ +R+F +M L G + D TV+ + A + L L + I
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G + VS+ IS ++KC ++++A L+F I R + ++S N+M++G T + +DS+
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEI--RKKDLISCNAMISGFTCNGETEDSVR 118
Query: 231 FYRHMMYNGFRLDVTTVVSLLS-------SFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
++ ++ +G R+ +T+V L+ S++C +H + G SV
Sbjct: 119 LFKELLSSGERVSSSTIVGLIPVYSPFGHSYLC-------NCIHGFCVKLGIVSHSSVST 171
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L ++Y + ++ AR LFD ++T SW AMISG Q G D A+ LF M+ P
Sbjct: 172 ALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNP 231
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+ VTV S++S C Q GAL LG+W + S + NV V ALIDMY+KCGSI ARELF
Sbjct: 232 NPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELF 291
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+PEK V+W MI+G L+G EAL LF+ ++ ++P +TFL+VL AC+H G ++
Sbjct: 292 DLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVK 351
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+G I D G + P +HY+CM D+LGR G+LK+AL+F+++MP++ +WG LL
Sbjct: 352 EGDGIFHTMVHDFG--FEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALL 409
Query: 524 CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
AC IH + + + LF+L+P + YV M+N Y++ ++ A++R + K+ ++ K
Sbjct: 410 GACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAK 469
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
PG +L I FT+ D+ H +S+ Y LD L E + +
Sbjct: 470 TPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQT 516
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 182/373 (48%), Gaps = 6/373 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S F KC ++ A +F E+ +D+ S NAM+ GF G E+ +RLF + G +
Sbjct: 74 SLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSS 133
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T++GL H L +H F + +G+ + SV + Y + +++ A +F
Sbjct: 134 TIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLF--D 191
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E +T+ SWN+M++GCT D +++ ++ M N + TV S+LS+ AL
Sbjct: 192 ESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSL 251
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G VHS F+ +V V LI MY+KCG I AR LFD + ++ V+W AMISGY
Sbjct: 252 GEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGL 311
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVM 381
G EAL+LF+ M ++ P +T LS++ C +G ++ G F G +
Sbjct: 312 HGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAE 371
Query: 382 VCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
++D+ + G + A E A+P E W ++ C ++ + A +L EL
Sbjct: 372 HYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFEL 431
Query: 441 DLRPNRVTFLAVL 453
D P + + ++
Sbjct: 432 D--PENIGYYVLM 442
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 9/238 (3%)
Query: 64 CAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
C KL + +S + + + + + + + A ++FDE A + +ASWNAM+ G Q G +
Sbjct: 158 CVKLGIVSHSSV--STALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTD 215
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M+ + + VTV + A LSL + VHS +++V V I
Sbjct: 216 AAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALI 275
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + +A +F + E + V+WN+M++G ++L + M+ + +
Sbjct: 276 DMYAKCGSITVARELFDLMPE--KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPT 333
Query: 244 VTTVVSLLSSFVCPEA--LVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSA 298
T +S+L + C A + +G + +H +GF+ ++ + + G + A
Sbjct: 334 GLTFLSVL--YACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKA 389
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 321/648 (49%), Gaps = 45/648 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS---DLIYSQMIHG 78
WNS I + + L FR M+ ++E ++ T +A AC+ L L + +HG
Sbjct: 162 WNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHG 221
Query: 79 HIVK-------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+ ++ + + K R+D + +F+ RD+ SWN M+ F+Q
Sbjct: 222 YSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEA 281
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS-VCNTWIS 184
L F M L G++ D VT+ + A H + L + K +H++ + + S V + +
Sbjct: 282 LAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVD 341
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLD 243
Y C ++ VF I R + WN+M++G + +L + M+ G +
Sbjct: 342 MYCNCRQVESGRRVFDHILGR--RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPN 399
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
TT+ S++ + V EA +H + + GF D V N L+ MYS+ G +D + +FD
Sbjct: 400 TTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFD 459
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAME-----------------AAGELPDLV 346
+ R RVSW MI+GY G AL L M+ P+ +
Sbjct: 460 SMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAI 519
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T+++++ GC A+ GK YA L ++ V +AL+DMY+KCG + +R +F +
Sbjct: 520 TLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEM 579
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-----DLRPNRVTFLAVLQACTHTGF 461
P K V++W +I C ++G+ EAL+LF ++ + +PN VTF+ V AC+H+G
Sbjct: 580 PNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGL 639
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWG 520
+ +G + D G+ P DHY+C+ DLLGR G+L+EA + V +MP + D G W
Sbjct: 640 ISEGLNLFYRMKHDHGVE--PTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWS 697
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
+LL AC+IH N+E+GE A L LEP+ A+ YV ++N Y+ G W+ +R M++
Sbjct: 698 SLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMG 757
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
VKK PG S + F A D H +SE + L+ L+ R+E Y
Sbjct: 758 VKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGY 805
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 259/566 (45%), Gaps = 50/566 (8%)
Query: 3 VSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
S PP+ RS+ W +R N+ + + + +M + P+N FP + K
Sbjct: 43 TSKTPPKPTSPSRSTA--SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLK 100
Query: 63 ACAKLSDLIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDVA 107
A + L DL + IH VK + + KC + K+FD + RD
Sbjct: 101 AVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQV 160
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA-----AIHAKHLSLLKS 162
SWN+ + + E L F M++ ++ T++ + A +H L L K
Sbjct: 161 SWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHG--LRLGKQ 218
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H + + +G D N ++ YAK + ++ +F + R +VSWN+M++ +
Sbjct: 219 LHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVD--RDMVSWNTMISSFSQS 275
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
D+F ++L F+R M+ G LD T+ S+L + E L G+ +H++ + ++ S +
Sbjct: 276 DRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFV 335
Query: 283 NT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAG 340
+ L+ MY C ++S R +FD I R W AMISGYA+ G ++AL LF M + AG
Sbjct: 336 GSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAG 395
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
LP+ T+ S++ C A + YA G K++ V NAL+DMYS+ G + +
Sbjct: 396 LLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISE 455
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-----------------LR 443
+F ++ + VSW TMI G L+G + AL L H++ ++ +
Sbjct: 456 TIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYK 515
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
PN +T + VL C + KG I + S ++ S + D+ + G L +
Sbjct: 516 PNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLAS---DITVGSALVDMYAKCGCLNLS 572
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIH 529
MP K + W L+ AC +H
Sbjct: 573 RRVFNEMPNK-NVITWNVLIMACGMH 597
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/621 (31%), Positives = 320/621 (51%), Gaps = 22/621 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+S I V+ E+ + L +FR + D+E +++T IA AC +L L ++ +HG I+
Sbjct: 168 WSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCII 227
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + +CD A +IF M R +ASW AM+ + + + + L+
Sbjct: 228 RQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQ 287
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISSY 186
+F M + + VT+M + + L KSVH + + HI +D D S+ I Y
Sbjct: 288 VFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDD-SLGPALIEYY 346
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+ L E V I +R ++SWN +++ F ++L + M G D +
Sbjct: 347 AQFGKLSYCEKVLHTIGKR--NIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFS 404
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S +S+ L G +H + I LD V N+LI MYSKCG +D A ++FD I
Sbjct: 405 LSSSISACANVGLLWLGHQIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQ 463
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ V+W +MI G++Q G+ EA+RLF M + VT L+ I C G LE GKW
Sbjct: 464 SKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKW 523
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ + G+K ++ + ALIDMY+KCG + A +F ++ E+ VVSW+ MI GC ++G+
Sbjct: 524 LHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGD 583
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
A+ LF ++++ +++PN +TF+ +L AC+H+G++E+G K P L+H
Sbjct: 584 IDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEG---KFYFNSMKNFEVEPNLEH 640
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
++CM DLL R G L EA + SMP ++A IWG LL C+IH +++ + L +
Sbjct: 641 FACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMR 700
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
Y ++N YA G WD +R+ MK +KK PG S ++ K F A D H
Sbjct: 701 TDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSH 760
Query: 607 AESELTYPVLDCLALHSREEA 627
+ + L+ + E+A
Sbjct: 761 WQVKEINTFLENFQSLASEQA 781
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 251/530 (47%), Gaps = 29/530 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I+ V N + + L+ +M I ++ F + +ACA +L + +HG I+
Sbjct: 67 WAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRII 126
Query: 82 K-----------SPFVKCDRLDC---AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S L C A K+FD M RD+ SW++++ + G L
Sbjct: 127 KYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLE 186
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F + ++ D VT++ + A L L KSVH I ++ + + + Y+
Sbjct: 187 MFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYS 246
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+CDD AE +F + R++ SW +M++ F +L + M+ + T+
Sbjct: 247 RCDDFSSAERIFSNMFN--RSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTI 304
Query: 248 VSLLSSFVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+++LSS L +G+ VH + + H D D S+ LI Y++ G + + I
Sbjct: 305 MAVLSSCAGFNLLREGKSVHCYAVKHIDLD-DDSLGPALIEYYAQFGKLSYCEKVLHTIG 363
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R +SW +IS YA +G EAL +F M+ G++PD ++ S IS C G L LG
Sbjct: 364 KRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQ 423
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
YA + D V N+LIDMYSKCG + A +F + K VV+W +MI G + G
Sbjct: 424 IHGYAIKRHILDE-FVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGN 482
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELD 485
+EA+ LF Q+ L N VTFL +QAC+H G LEKG W K I+Y + D
Sbjct: 483 SLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKW------LHHKLIAYGVKKD 536
Query: 486 HY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ + + D+ + G L+ A SM +S W ++ C +H +I+
Sbjct: 537 LFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVS-WSAMIGGCGMHGDID 585
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 164/350 (46%), Gaps = 16/350 (4%)
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
M L ++ + L+LL HS + G+ D I SY++ L+ ++LVF E
Sbjct: 5 MPLFRSCTSLRPLTLL---HSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVF----E 57
Query: 205 RLRTVVS--WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+ S W ++ + + ++++ Y M+Y + S+L + L
Sbjct: 58 TFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDV 117
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G VH I YG D+D V +L+ MY G + +A+ +FD + R VSW+++IS Y
Sbjct: 118 GEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVD 177
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G+ E L +F + + D VT+LS+ CG+ G L L K ++ +
Sbjct: 178 NGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPL 237
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+AL+ MYS+C A +F + + + SWT MI+ + F +AL +F +++E +
Sbjct: 238 NDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKV 297
Query: 443 RPNRVTFLAVLQACTHTGFLEKG-----WAISIIQYDDKGISYNPELDHY 487
PN VT +AVL +C L +G +A+ I DD S P L Y
Sbjct: 298 APNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDD--SLGPALIEY 345
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 16/316 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WN I ++ + L +F QM++ P++ + ACA + L IH
Sbjct: 366 NIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIH 425
Query: 78 GHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
G+ +K + KC +D AY IFD + + V +WN+M+ GF+Q+G
Sbjct: 426 GYAIKRHILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLE 485
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+RLF M L + + VT + QA H HL K +H I GV D+ + I
Sbjct: 486 AIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALID 545
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC DL++A VF + E R+VVSW++M+ GC D +++ + M+ + +
Sbjct: 546 MYAKCGDLRIAHRVFDSMSE--RSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPND 603
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T +++LS+ + +G+ + ++ + ++ ++ + S+ GD+D A + +
Sbjct: 604 ITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINS 663
Query: 305 ICDRTRVS-WTAMISG 319
+ S W A+++G
Sbjct: 664 MPFPAEASIWGALLNG 679
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 18/264 (6%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI +S ++ WNS I + + + LF QM N ++ N +TF +AC+ +
Sbjct: 459 FDRI-QSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGH 517
Query: 70 LIYSQMIHGHIV-----KSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +H ++ K F+ KC L A+++FD M+ R V SW+AM+ G
Sbjct: 518 LEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGG 577
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
G ++ + LF M ++ + +T M + A H+ ++ K + + V+ +
Sbjct: 578 CGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPN 637
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ + ++ DL A + + + W +++ GC + D N R +
Sbjct: 638 LEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASI-WGALLNGCRIHQRMDMIRNIERDL 696
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEA 259
+ R D T +LLS+ E
Sbjct: 697 L--DMRTDDTGYYTLLSNIYAEEG 718
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 195/629 (31%), Positives = 314/629 (49%), Gaps = 24/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + L ++ + + + P+ T + AC L + +HG I
Sbjct: 190 WNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + K +RL A ++F +MAV+D +WN M+ G+AQ+G E ++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M + G D +++ +A + L + K VH + I G + D CN I YA
Sbjct: 310 LFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A+ VF + + V+WNS++ G T + + L ++ MM + D T
Sbjct: 369 KCGDLLAAQEVF--DTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTF 425
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V LLS F + QGR +H I +GF+ ++ + N+L+ +Y+KCG++D +F +
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+SW +I+ D ++ M G +PD TVL ++ C GK
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y G + NV + NALI+MYSKCGS+ + ++F + EK VV+WT +I+ + GE
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELD 485
+AL F + + P+ V F+A + AC+H+G +++G +D YN P ++
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRF----FDRMKTDYNLEPRME 661
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ DLL R G L +A +F+ SMP+K DA +WG LL AC+ N I + V+ + +L
Sbjct: 662 HYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILEL 721
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
YV ++N YA G+WD V +R MK +KK PG S I + F D+
Sbjct: 722 NSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKS 781
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
+ + +L+ L +E Y + L++
Sbjct: 782 FEQYDKVKDLLEYLVRLMAKEGYVADLQF 810
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 251/527 (47%), Gaps = 22/527 (4%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I ++ + WNS IR + + L + +M++ ++P+ TFP + +CA++ DL
Sbjct: 80 ISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLEL 139
Query: 73 SQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++H H ++ F + LD A +F+EM+ RD SWN+++ G+
Sbjct: 140 GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCS 199
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
GF E+ L +++ R+ G+ D T+ + A + +VH IG+ DV +
Sbjct: 200 NGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVII 259
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N +S Y K + L+ A VF + ++ V+WN+M+ G + + S+ + M+ +
Sbjct: 260 GNGLLSMYFKFERLREARRVFSKMA--VKDSVTWNTMICGYAQLGRHEASVKLFMDMI-D 316
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
GF D+ ++ S + + L G+ VH + I GF+ D N LI MY+KCGD+ +A
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ +FD + V+W ++I+GY Q G E L F M+ + PD VT + ++S Q
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQL 435
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
+ G+ G + +++ N+L+D+Y+KCG + D ++F + ++SW T+I
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
A + + +++ L P+ T L +L C+ +G I + G
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIF-KSGF 554
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
N + + + ++ + G L+ + + M K D W L+ A
Sbjct: 555 ESNVPIGN--ALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISA 598
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 180/372 (48%), Gaps = 10/372 (2%)
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
AK+ L++VHS I G+ V IS YA+ D + VF I V WN
Sbjct: 32 AKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT-NNVYLWN 90
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
S++ T+ F +L +Y M + D T S+++S L G +VH H +
Sbjct: 91 SIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEM 150
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GF+ D+ + N LI MYS+ D+D+AR +F+ + +R VSW ++ISGY G ++AL ++
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
G +PD T+ S++ CG A++ G G+ +V++ N L+ MY K
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ +AR +F + K V+W TMI G A G ++ LF +++ P+ ++ + +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMP 511
+AC +G L+ G + I E D +C + D+ + G L A + +
Sbjct: 330 RACGQSGDLQVGKFVHKYL-----IGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK 384
Query: 512 IKSDAGIWGTLL 523
K D+ W +L+
Sbjct: 385 CK-DSVTWNSLI 395
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
SLL + + Q R VHS I G L V LIS Y++ D S+ +F I
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 309 TRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
V W ++I G +AL + M PD T S+I+ C + LELG
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+A G + ++ + NALIDMYS+ + +AR +F + + VSW ++I+G NG +
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+ALD++H+ + P+ T +VL AC +++G A+ + + GI+ + + +
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGV-IEKIGIAGDVIIGN- 261
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + + +L+EA M +K D+ W T++C
Sbjct: 262 -GLLSMYFKFERLREARRVFSKMAVK-DSVTWNTMICG 297
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 312/584 (53%), Gaps = 18/584 (3%)
Query: 57 FPFIAKACAKLSDL--IYSQMIHGHIVKSP---FVKCDRLDCAYK--IFDEMAVRDVASW 109
F + + C + L I++Q++ I K + D D AY F + S+
Sbjct: 35 FNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSF 94
Query: 110 NAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
N M+ G + ++ FY+ M+ +G++ + +T L A + + + H I
Sbjct: 95 NVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVI 154
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
G+D D V ++ I+ YA+C + A VF I ++ +VSWNSM++G + ++
Sbjct: 155 RRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQK--DLVSWNSMISGYSKMRHAGEA 212
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLI 286
+ +R MM GF+ + ++VS+L + C E L G V + L+ + + LI
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGA--CGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY KCGD+ SAR +FD + + +V+W AMI+GYAQ G +EA++LF M + PD +
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQI 330
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++ ++S C GAL+LGK + YA G +D+V V AL+DMY+KCGS+ +A +FY +
Sbjct: 331 TLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM 390
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNRVTFLAVLQACTHTGFLEK 464
P K VSW MI+ A +G+ EAL LF +M + PN +TF+ VL AC H G +++
Sbjct: 391 PNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDE 450
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G + + G+ P+++HYSCM DL R G L+EA DFV +MP K D I G LL
Sbjct: 451 GRRLFHMMSSSFGLV--PKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLG 508
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
AC+ NI+I E V L +LEP ++ YV + YA RWD A +R +MK+ V K
Sbjct: 509 ACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKT 568
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
PG S IN + F A D H E + +LD L R E Y
Sbjct: 569 PGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGY 612
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 202/394 (51%), Gaps = 19/394 (4%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH-----------GHIV 81
N++ L + +MK ++PNNLT+PF+ AC+ L + +M H GH+
Sbjct: 106 NKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVS 165
Query: 82 KS---PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
S + +C ++ A K+FDE++ +D+ SWN+M+ G+++M + LF M G Q
Sbjct: 166 HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ ++++ + A L L V F + + + + + I Y KC DL A +
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRI 285
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F ++++ + V+WN+M+ G ++++ ++ M + D T++ +LS+
Sbjct: 286 FDSMKKKDK--VTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIG 343
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL G+ V + GF DV V L+ MY+KCG +D+A +F G+ ++ VSW AMIS
Sbjct: 344 ALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMIS 403
Query: 319 GYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGG 375
A G EAL LF +M E P+ +T + ++S C +G ++ G + F + S G
Sbjct: 404 ALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFG 463
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
L + + ++D++S+ G + +A + +PEK
Sbjct: 464 LVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 19/294 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------I 71
WNS I A + + LFR+M + +PN ++ + AC +L DL +
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 72 YSQMIHGHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++M + + S + KC L A +IFD M +D +WNAM+ G+AQ G E ++
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +MR+ D +T++G+ A L L K V + G DV V + YA
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT-- 245
KC L A VF G+ + VSWN+M++ + + ++L ++ MM G +
Sbjct: 376 KCGSLDNAFRVFYGMPN--KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDI 433
Query: 246 TVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T V +LS+ V + +G RL H +G + + ++ ++S+ G ++ A
Sbjct: 434 TFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 313/615 (50%), Gaps = 24/615 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V + + L LF +M++ + + ++ ++CA +S L + +H H +
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K + L A + F + V + NAM+VG + G +
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M I+ D V++ G+ A K + VH I G D D+ V N + Y
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A L+F G++++ VSWN+++A +DD++ + M+ G + D T
Sbjct: 398 KCKALMEAYLIFQGMKQK--DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 455
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +L G +VH I G D V +T++ MY KCG ID A+ L D I
Sbjct: 456 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 515
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW A++SG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 516 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 575
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ D+ + + L+DMY+KCG + D+ +F + ++ VSW MI G AL+G
Sbjct: 576 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 635
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---WAISIIQYDDKGISYNPEL 484
VEAL +F ++ + ++ PN TF+AVL+AC+H G + G + + Y P+L
Sbjct: 636 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHY-----KLEPQL 690
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+H++CM D+LGR +EA+ F+ SMP ++DA IW TLL CKI ++EI E A +
Sbjct: 691 EHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLL 750
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P ++ Y+ ++N YA G+W V+ R ++K+ ++KK PG S + + F D+
Sbjct: 751 LDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDK 810
Query: 605 YHAESELTYPVLDCL 619
H S Y +L+ L
Sbjct: 811 AHPRSGELYEMLNDL 825
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 244/532 (45%), Gaps = 31/532 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + + +++ LF +M + + P+ TF + K+C+ L +L +H V
Sbjct: 117 WNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 176
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC LD A F M R+ SW A + G Q L
Sbjct: 177 KTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLE 236
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ +G+ + ++ L+ + +H+ I +D V + YA
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + L A F G+ TV + N+M+ G +++ ++ M+ + R DV ++
Sbjct: 297 KANSLTDARRAFFGLPN--HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ S+ + QG+ VH I GFD+D+ V N ++ +Y KC + A ++F G+
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW A+I+ Q G D+ + F M G PD T S++ C +LE G
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ GL + V + ++DMY KCG I +A++L + + VVSW +++G +LN E
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 534
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQ---YDDKGISYNP 482
EA F +++++ L+P+ TF VL C + +E G I II+ DD+ IS
Sbjct: 535 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS--- 591
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-LNIE 533
S + D+ + G + ++L + + K D W ++C +H L +E
Sbjct: 592 -----STLVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHGLGVE 637
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 180/378 (47%), Gaps = 2/378 (0%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ A +FD M DV SWNA++ G+ Q G + + LF M G+ D T L ++
Sbjct: 99 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 158
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ LSL VH+ + G++ DV + + Y KC L A F G+ ER V
Sbjct: 159 CSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER--NWV 216
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW + +AGC +++ L + M G + + S S L GR +H+H
Sbjct: 217 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
I F D V ++ +Y+K + AR F G+ + T + AM+ G + G EA+
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M + D+V++ + S C ++ G+ A G ++ V NA++D+Y
Sbjct: 337 GLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLY 396
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KC ++ +A +F + +K VSW +IA NG + + + F++++ ++P+ T+
Sbjct: 397 GKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYG 456
Query: 451 AVLQACTHTGFLEKGWAI 468
+VL+AC LE G +
Sbjct: 457 SVLKACAALRSLEYGLMV 474
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 157/346 (45%), Gaps = 6/346 (1%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT +++Y+ D+ A +F G+ + VVSWN++V+G F +S++ + M G
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDP--DVVSWNALVSGYCQRGMFQESVDLFVEMARRG 144
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D TT LL S E L G VH+ + G ++DV + L+ MY KC +D A
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F G+ +R VSW A I+G Q L LF M+ G + S C
Sbjct: 205 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
L G+ +A + +V A++D+Y+K S+ DAR F+ LP V + M+
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 324
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G G +EA+ LF ++ +R + V+ V AC T +G + +
Sbjct: 325 GLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS---G 381
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
++ ++ + + DL G+ L EA Q M K D+ W ++ A
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAA 426
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 195/424 (45%), Gaps = 22/424 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ N+ + V + + LF+ M ++ I + ++ + ACA+ Q +H
Sbjct: 315 TVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 374
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+KS F KC L AY IF M +D SWNA++ Q G +
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ + F M G++ D T + +A + L VH I G+ +D V +T +
Sbjct: 435 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 494
Query: 184 SSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
Y KC + A+ + +R+ + VVSWN++++G + + +++ F+ M+ G +
Sbjct: 495 DMYCKCGIIDEAQ----KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T ++L + + G+ +H I D + +TL+ MY+KCGD+ + ++
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + R VSW AMI GYA G EALR+F M+ +P+ T ++++ C G
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 362 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
+ G ++F L+ + ++D+ + +A + ++P + V W T+++
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 420 GCAL 423
C +
Sbjct: 731 ICKI 734
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 103/223 (46%), Gaps = 31/223 (13%)
Query: 274 GFDLDVSVINTLISM-------------------------------YSKCGDIDSARVLF 302
GF + V N L+ M YS GDI +A LF
Sbjct: 47 GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DG+ D VSW A++SGY Q+G E++ LF M G PD T ++ C L
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
LG A GL+ +V +AL+DMY KC S+ DA FY +PE+ VSW IAGC
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
N ++V L+LF ++ L L ++ ++ + ++C L G
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 269
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 86/219 (39%), Gaps = 41/219 (18%)
Query: 343 PDLVTVLSMISGCGQSG--ALELGKWFDNYACSGGLKDNVMVCNALIDM----------- 389
P VT + C Q+G AL G+ G N V N L+ M
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACAR 72
Query: 390 --------------------YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
YS G I A LF +P+ VVSW +++G G F E
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD--HY 487
++DLF ++ + P+R TF +L++C+ L G +Q + E+D
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG-----VQVHALAVKTGLEIDVRTG 187
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
S + D+ G+ L +AL F MP ++ WG + C
Sbjct: 188 SALVDMYGKCRSLDDALCFFYGMPERNWVS-WGAAIAGC 225
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 283/533 (53%), Gaps = 16/533 (3%)
Query: 85 FVKCDRLDCAYKIF-DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+ KC ++ A +F D R+V ++NA++ GF G + + MRL G+ D T
Sbjct: 56 YSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYT 115
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + + K +H + +G++ DV V + +++Y K ++ A+ VF E
Sbjct: 116 FPCVVRTCCEVMEV---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFG--E 170
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+R VV WN+M+ G D++L +R M G T+ +LS F L G
Sbjct: 171 LSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNG 230
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ VH + G+D VSV N LI MY KC I A ++F+ I ++ SW ++IS + Q
Sbjct: 231 KTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQC 290
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------ 377
GD D LRLF M +G LPDLVT+ +++ C AL G+ Y GL
Sbjct: 291 GDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENG 350
Query: 378 --DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
DN++V NA++DMY+KCGS+ +A ++F ++ +K V SW MI G ++G +EAL +F
Sbjct: 351 AVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFS 410
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
Q+ E + +PN VT + VL AC H GF+ G G+ P ++HY+C+ D+LG
Sbjct: 411 QMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVI--PTIEHYTCVIDMLG 468
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G L++A + VQ MPI+++ +W LL AC++H N E+ E A + +LEP YV
Sbjct: 469 RAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVL 528
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
M+N Y + GR++ V +R MK VKK PG S + F DR H+E
Sbjct: 529 MSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTHSE 581
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 218/444 (49%), Gaps = 29/444 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I V+ A K +++M+ + P+ TFP + + C ++ ++ + IHG ++
Sbjct: 81 YNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGCLL 137
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + ++K ++ A K+F E+++RDV WNAM+ G+A++G L+ L
Sbjct: 138 KMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALE 197
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M + G+ T+ G+ L K+VH + +G D+ VSV N I Y
Sbjct: 198 VFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYG 257
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A ++F I E + + SWNS+++ D +L + M+ +G D+ T+
Sbjct: 258 KCKHIGDALIIFEMINE--KDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTI 315
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLD--------VSVINTLISMYSKCGDIDSAR 299
++L + AL+ GR +H + I G D + V N ++ MY+KCG +++A
Sbjct: 316 TTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNAL 375
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+FD + + SW MI GY G EAL +F M A P+ VT++ ++S C +G
Sbjct: 376 KIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAG 435
Query: 360 ALELGKWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
+ G+ F + G+ + +IDM + G + DA E+ +P + V W +
Sbjct: 436 FVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRAL 495
Query: 418 IAGCALNGEFVEALDLFHQLMELD 441
+ C L+G A Q+++L+
Sbjct: 496 LGACRLHGNAELAEIAARQVLQLE 519
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 180/387 (46%), Gaps = 12/387 (3%)
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
Q+ ++L+ K +HS I G + I+ Y+KC + A LVF R
Sbjct: 19 QSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHE-RN 77
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
V ++N++++G FY+ M G D T ++ + C E + + + +H
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRT--CCEVM-EVKKIHG 134
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ G +LDV V + L++ Y K G ++ A+ +F + R V W AMI+GYA+ G LDE
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL +F M G P T+ ++S G L+ GK G V V NALID
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY KC IGDA +F + EK + SW ++I+ G+ L LF +++ + P+ VT
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314
Query: 449 FLAVLQACTHTGFLEKG------WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
VL AC+H L G I+ + DD+ + + L + M D+ + G +
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVM-DMYAKCGSMNN 373
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIH 529
AL SM K D W ++ +H
Sbjct: 374 ALKIFDSMS-KKDVASWNIMIMGYGMH 399
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 141/284 (49%), Gaps = 12/284 (4%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+VT V+ L S + L +G+ +HS I YGF I +LI+MYSKCG + A ++F
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 303 DGIC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
C +R ++ A+ISG+ G + + + M G +PD T ++ C + +
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE--VM 127
Query: 362 ELGKWFDNYAC--SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
E+ K + C GL+ +V V +AL++ Y K GS+ DA+++F L + VV W MI
Sbjct: 128 EVKKI---HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMIN 184
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A G EAL++F ++ + P+R T +L G L+ G + I +
Sbjct: 185 GYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMK---MG 241
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
Y+ + + + D+ G+ + +AL + M + D W +++
Sbjct: 242 YDSGVSVSNALIDMYGKCKHIGDAL-IIFEMINEKDIFSWNSII 284
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WNS I + TL LF +M + I P+ +T + AC+ L+ L++ + IHG
Sbjct: 277 IFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHG 336
Query: 79 HI----------------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
++ V + KC ++ A KIFD M+ +DVASWN M++G+
Sbjct: 337 YMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGY 396
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
G+ L +F M + + VT++G+ A HA +S
Sbjct: 397 GMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVS 438
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
+ A L ++ ++ + C L GK + + G + +LI+MYSKCG
Sbjct: 2 LSAIQMLNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQ 61
Query: 396 IGDARELFY-ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+G+A +FY E+ V ++ +I+G NG + + ++ + P++ TF V++
Sbjct: 62 MGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVR 121
Query: 455 AC 456
C
Sbjct: 122 TC 123
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/610 (32%), Positives = 312/610 (51%), Gaps = 20/610 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + L L+ +M I P+ TFP + + C L DL + +H H++
Sbjct: 163 WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI 222
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F VKC + A +FD M RD SWNAM+ G+ + LR
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ MR + D +T+ + A L + VH + I G A+VSV N+ I ++
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHS 342
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
AE+VF +E + +VSW +M++G + ++ Y M + G D T+
Sbjct: 343 SVGCWDEAEMVFSKME--FKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ L +G ++H G V V N+LI MYSKC ID A +F I +
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SWT++I G EAL FF P+ VT++S++S C + GAL GK
Sbjct: 461 KNVISWTSIILGLRLNYRSFEAL-FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEI 519
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+A GL + + NAL+DMY +CG + A F + EK V SW ++ G A G+
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKG 578
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
A++LFH+++E D+ P+ +TF ++L AC+ +G + G + + + P L HY
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDG--LEYFESMEHKFHIAPNLKHY 636
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+ + DLLGR G+L++A +F++ MPI D IWG LL AC+I+ N+E+GE A +F+++
Sbjct: 637 ASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDT 696
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
S Y+ + N YA G+WD VA +R +M+ N++ PG S + G+ F D +H
Sbjct: 697 KSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHP 756
Query: 608 ESELTYPVLD 617
+ + VL+
Sbjct: 757 QIKEINAVLE 766
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 260/522 (49%), Gaps = 22/522 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S T NS I E K + K L+ M++ + T+ + + C
Sbjct: 56 SITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSR 115
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H ++ K S FV+ L A+ +F +MA RD+ SWN ++ G+A+ G+
Sbjct: 116 VHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGY 175
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ L L++ M VGI+ D T + + L+ + VH I G ++DV V N
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I+ Y KC D+ A LVF + R R +SWN+M++G D + L + M
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRRDR--ISWNAMISGYFENDVCLEGLRLFFMMREFFVD 293
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D+ T+ S++S+ GR VH + I GF +VSV N+LI M+S G D A ++
Sbjct: 294 PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMV 353
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + + VSWTAMISGY + G ++A+ + ME G +PD +T+ S++S C G L
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ G +A GL V+V N+LIDMYSKC I A E+F+ +P K V+SWT++I G
Sbjct: 414 DKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL 473
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
LN EAL F Q++ L L+PN VT ++VL AC G L G I G+ ++
Sbjct: 474 RLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIH-AHALRTGLGFD 531
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
L + + D+ R G+++ A + Q + D W LL
Sbjct: 532 GFLP--NALLDMYVRCGRMEPAWN--QFNSCEKDVASWNILL 569
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 322/613 (52%), Gaps = 34/613 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WNS I ++ FR+M + P+ T + CA D+ +HG
Sbjct: 170 WNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGL 229
Query: 80 IVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
VK + KC L A +FD+ +++ SWN+M+ G+A+ E+V
Sbjct: 230 AVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYARE---EDV 286
Query: 126 LRLFYNMRLV-----GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
R FY ++ + ++AD T++ + + L LK +H + G+ ++ V N
Sbjct: 287 CRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVAN 346
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+I++Y +C L +E VF ++ + TV SWN+++ G +L+ Y M +G
Sbjct: 347 AFIAAYTRCGALCSSERVFDLMDTK--TVSSWNALLCGYAQNSDPRKALDLYLQMTDSGL 404
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D T+ SLL + ++L G +H + G +D + +L+S+Y CG +A+V
Sbjct: 405 DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQV 464
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LFDG+ R+ VSW MI+GY+Q G DEA+ LF M + G P + ++ + C Q A
Sbjct: 465 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 524
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L LGK +A L +++ V +++IDMY+K G IG ++ +F L EK V SW +IAG
Sbjct: 525 LRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAG 584
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
++G EAL+LF +++ L L+P+ TF +L AC+H G +E G ++Y ++ ++
Sbjct: 585 YGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG-----LEYFNQMLNL 639
Query: 481 N---PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
+ P+L+HY+C+ D+LGR G++ +AL ++ MP D+ IW +LL +C+IH N+ +GE
Sbjct: 640 HNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEK 699
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA L +LEP YV ++N +A G+WD V +R MK ++K G S + GK
Sbjct: 700 VANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVH 759
Query: 598 TFTAEDRYHAESE 610
F D E E
Sbjct: 760 NFLIGDEMLPELE 772
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 240/474 (50%), Gaps = 29/474 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLL-LFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIY 72
R + QWN+ I A +NE + + +F ++ + +P+N T P + KACA L DL
Sbjct: 61 RRKNLFQWNA-IVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGL 119
Query: 73 SQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
Q+IHG K V KC ++ A K+F+ M R++ SWN+++ GF++
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179
Query: 119 MGFLENVLRLFYNMRLVGIQA---DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
GFL+ F M LVG ++ D T++ + + + +VH + +G++ +
Sbjct: 180 NGFLQESFNAFREM-LVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY--R 233
+ V N+ I Y+KC L A+L+F ++ + +VSWNSM+ G Y + D FY +
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDK--KNIVSWNSMIGG--YAREEDVCRTFYLLQ 294
Query: 234 HMMYNGFRL--DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
M ++ D T++++L + L + +H + +G + V N I+ Y++
Sbjct: 295 KMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTR 354
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG + S+ +FD + +T SW A++ GYAQ D +AL L+ M +G PD T+ S+
Sbjct: 355 CGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSL 414
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C + +L G+ +A GL + + +L+ +Y CG A+ LF + + +
Sbjct: 415 LLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 474
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
VSW MIAG + NG EA++LF Q++ ++P + + V AC+ L G
Sbjct: 475 VSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG 528
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 209/429 (48%), Gaps = 22/429 (5%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSP-----FVKCDRLDCAYK----------IFDEMAVR 104
+ +AC + D+ + +H + S FV R+ Y +FD++ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
++ WNA++ + + E+ + +F + + + D T+ + +A L L + +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H + + +DV V N I+ Y KC ++ A VF + E R +VSWNS++ G +
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPE--RNLVSWNSIICGFSENG 181
Query: 224 KFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+S N +R M+ F DV T+V++L E + +G VH + G + ++ V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAA 339
N+LI MYSKC + A++LFD + VSW +MI GYA++ D+ L M E A
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
D T+L+++ C + L+ K Y+ GL+ N +V NA I Y++CG++ +
Sbjct: 302 KMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSS 361
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F + K V SW ++ G A N + +ALDL+ Q+ + L P+ T ++L AC+
Sbjct: 362 ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 421
Query: 460 GFLEKGWAI 468
L G I
Sbjct: 422 KSLHYGEEI 430
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 312/643 (48%), Gaps = 85/643 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I+ + K + QM+ ++ PN T P I CA+L L + IHG +
Sbjct: 98 WNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVS 157
Query: 82 KSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
KS + KC ++ A +FDE+ VRDV SW A+++G+ E L
Sbjct: 158 KSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGL 217
Query: 127 RLFYNMRLVGIQADFV---TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
MR +G + V T+ G QA + + + +H + G+ V ++ +
Sbjct: 218 ECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLL 277
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
S Y+KC +++ A FC + ++ V SW S++ C ++ LN + M + D
Sbjct: 278 SMYSKCGNVEEAHNSFCQVVDK--DVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPD 335
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHS----------------------------------H 269
V +L F + +G+ H
Sbjct: 336 GIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFD 395
Query: 270 GIH-----------YGF----------DLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
G+H +G+ D DVS+ N+LI MY K G++ A +F C
Sbjct: 396 GVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMF---CRT 452
Query: 309 TR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R V+W +IS Y G EA+ LF M + P+ T++ ++S C +LE GK
Sbjct: 453 QRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKM 512
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y GG + NV + AL+DMY+KCG + +RELF ++ EK V+SW MI+G L+G+
Sbjct: 513 VHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGD 572
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELD 485
A+++F Q+ + +++PN +TFL++L ACTH G++++G + +QY S P L
Sbjct: 573 ANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQY----YSIKPNLK 628
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H++CMADLLGR G L+EA D VQSMPI D G+WGTLL ACKIH IEIG VA C +
Sbjct: 629 HFACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIES 688
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+P + Y+ ++N Y G+WD R +MK + K G S
Sbjct: 689 DPENDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRAGWS 731
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 213/493 (43%), Gaps = 68/493 (13%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD +D WN+++ G + MR + T+ +
Sbjct: 86 VFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLW 145
Query: 157 LSLLKSVHSFGIHIGVDADVS-VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L K +H G+ A+ S V ++++ YAKC ++ A L+F E +R VVSW ++
Sbjct: 146 LEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMF--DEIVVRDVVSWTAL 203
Query: 216 VAGCTYGDKFDDSLNFY---RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
V G + D + L R + +G +++ T+ + A++ GR +H +
Sbjct: 204 VIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVK 263
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G V ++L+SMYSKCG+++ A F + D+ SWT++I A+ G ++E L L
Sbjct: 264 TGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNL 323
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD------NYA-------------CS 373
F+ M+ PD + V ++ G G S + GK F NY C
Sbjct: 324 FWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCK 383
Query: 374 GGLKD-----------------NVMV-------------------CNALIDMYSKCGSIG 397
G + N MV N+LIDMY K G++
Sbjct: 384 FGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLS 443
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A ++F ++ VV+W T+I+ +G + EA+ LF +++ L PN T + VL AC
Sbjct: 444 IAWKMF-CRTQRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACC 502
Query: 458 HTGFLEKGWAISIIQY-DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
H LEKG + QY + G N L + + D+ + G+L+++ + SM K D
Sbjct: 503 HLPSLEKGKMVH--QYIKEGGFELNVSLG--TALVDMYAKCGQLEQSRELFNSMKEK-DV 557
Query: 517 GIWGTLLCACKIH 529
W ++ +H
Sbjct: 558 ISWNVMISGYGLH 570
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 10/321 (3%)
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+ L L H+ I G +V + + IS YA + VF ++ W
Sbjct: 41 QTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQK--DTFLW 98
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL--VQGRLVHSHG 270
NS++ + + +FY M Y+ + T+ ++++ C E L +G+ +H
Sbjct: 99 NSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVAT--CAELLWLEEGKYIHGLV 156
Query: 271 IHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
G F + +V ++ + MY+KCG ++ A ++FD I R VSWTA++ GY D ++
Sbjct: 157 SKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKG 216
Query: 330 LRLFFAME---AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
L M GE + T+ CG GA+ G+ A GL + +V ++L
Sbjct: 217 LECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSL 276
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ MYSKCG++ +A F + +K V SWT++I CA G E L+LF + D+ P+
Sbjct: 277 LSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDG 336
Query: 447 VTFLAVLQACTHTGFLEKGWA 467
+ +L ++ + +G A
Sbjct: 337 IVVSCILLGFGNSMMVREGKA 357
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 318/616 (51%), Gaps = 23/616 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W + I VN +++ + L LF +M+ Q+++ + K C + +Y +HG
Sbjct: 83 WTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFS 142
Query: 81 VKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK+ V K + + K+FDEM R+ +W A++ G + G+ E L
Sbjct: 143 VKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGL 202
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M ++ D +A+ + L+ +S+H+ + G D + V N+ + Y
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMY 262
Query: 187 AKCDDLKMAELVFCGIEERLRT--VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
KC L F ++RT VVSW ++V K D L ++ M + +
Sbjct: 263 NKCGKLDYGLHTF----RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNE 318
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T +++S L G +H+H + GF +SV N+++++YSKCG++ S +F
Sbjct: 319 YTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCS 378
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R ++W+ +I+ Y+Q G +EA M + G P+ + S++S CG LE G
Sbjct: 379 MKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG 438
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K + S GL+ MVC+ALI MY+KCGSI +A ++F + ++SWT MI+G A +
Sbjct: 439 KQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEH 498
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EA++LF + ++ LRP+ VTF+ VL AC+H G ++ G+ D I+ P
Sbjct: 499 GHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHIT--PSK 556
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY CM DLL R G+L +A ++SMPI+ D +W TLL AC+IH +++ G+ A + K
Sbjct: 557 EHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK 616
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P+ A ++ +AN +A G+W ANIR +MK V K PG S + F + DR
Sbjct: 617 LDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDR 676
Query: 605 YHAESELTYPVLDCLA 620
H + E Y +L+ LA
Sbjct: 677 SHPQGEDIYNILEELA 692
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 198/441 (44%), Gaps = 10/441 (2%)
Query: 27 REAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV 86
R+ V +N T+L K ND + T P A S+ + + + V
Sbjct: 6 RQHVKRN---FTVLAVAGAKTNDNPRHLYTKPLSLTLNAHFSNKV--DLAEANNQLKILV 60
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQAD-FVTV 144
K + L A +FD++ RD SW ++ G+ LRLF MRL ++ D F+
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+GL + +L ++H F + G+ V V + + Y K ++ + VF E
Sbjct: 121 LGLKTCGLGLNYL-YGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVF--DEM 177
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R V+W +++ G + L ++ M + D L + AL GR
Sbjct: 178 PTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGR 237
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H+ + GFD + V N+L +MY+KCG +D F + VSWT +++ Y Q G
Sbjct: 238 SIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMG 297
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
D L+ F M A+ +P+ T ++IS C L+ G+ + G + + V N
Sbjct: 298 KEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVAN 357
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+++ +YSKCG + ++F ++ + +++W+T+IA + G EA + ++ +P
Sbjct: 358 SIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKP 417
Query: 445 NRVTFLAVLQACTHTGFLEKG 465
N +VL C LE+G
Sbjct: 418 NEFALASVLSVCGSMAILEQG 438
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
P L L + H+ +D++ N + + K + AR LFD + R VSWT +
Sbjct: 27 PRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNI 86
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM-ISGCGQSGALELGKWFDNYACSGG 375
ISGY D EALRLF M EL +LS+ + CG G ++ G
Sbjct: 87 ISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTG 146
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
L ++V V +AL+DMY K G IG + ++F +P + V+WT +I G G L F
Sbjct: 147 LVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFS 206
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+ + + + L+A +G L G +I Q KG N + + + +
Sbjct: 207 GMGRSKVEYDSYAYAIALKASADSGALNHGRSIH-TQTLKKGFDENSFVAN--SLTTMYN 263
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ GKL L + M D W T++ A
Sbjct: 264 KCGKLDYGLHTFRKMRTL-DVVSWTTIVTA 292
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R R+ + W + + + + L F++M+ +++ PN TF + CA + L
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 72 YSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ + +H H++ FV KC L K+F M RD+ +W+ ++ ++
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q+G+ E MR G + + + + L K +H+ + +G++
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
VC+ I YAKC + A +F ++ ++SW +M++G +++ + ++
Sbjct: 456 VCSALIIMYAKCGSIAEASKIF--MDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQK 513
Query: 238 NGFRLDVTTVVSLLSS 253
G R D T + +L++
Sbjct: 514 VGLRPDSVTFIGVLTA 529
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 301/567 (53%), Gaps = 8/567 (1%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
Y + + + + + K + A ++FDE+ D+ S+N ++ +A G LRLF
Sbjct: 72 YPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAE 131
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
+R + D T+ G+ A + L++ +H F + G D SV N ++ Y++
Sbjct: 132 VRELRFGLDGFTLSGVIIAC--GDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGF 189
Query: 192 LKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
L A VF + E R VSWN+M+ C + +++ +R M+ G ++D+ T+ S+
Sbjct: 190 LNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASV 249
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSARVLFDGICDRT 309
L++F C + LV G H I GF + V + LI +YSKC G + R +F+ I
Sbjct: 250 LTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPD 309
Query: 310 RVSWTAMISGYAQKGDLDE-ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
V W MISG++Q DL E + F M+ G PD + + + S C + +GK
Sbjct: 310 LVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVH 369
Query: 369 NYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A + N V V NAL+ MYSKCG++ DAR +F +PE +VS +MIAG A +G
Sbjct: 370 ALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVE 429
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
VE+L LF +++ D+ PN +TF+AVL AC HTG +E+G + + I PE +HY
Sbjct: 430 VESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIE--PEAEHY 487
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SCM DLLGR GKLKEA +++MP + W TLL AC+ H N+E+ A +LEP
Sbjct: 488 SCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEP 547
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++AAPYV ++N YA RW+ A ++ +M+ VKK PG S I+ K F AED H
Sbjct: 548 YNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHP 607
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKW 634
+ + + + ++ Y ++W
Sbjct: 608 MIKEIHVYMGEILRKMKQAGYVPDIRW 634
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 26/345 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I E + + LFR+M + ++ + T + A + DL+ HG ++
Sbjct: 211 WNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMI 270
Query: 82 KSPF--------------VKC--DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL-EN 124
KS F KC ++C K+F+E+A D+ WN M+ GF+Q L E+
Sbjct: 271 KSGFHGNSHVGSGLIDLYSKCAGGMVECR-KVFEEIAAPDLVLWNTMISGFSQYEDLSED 329
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWI 183
+ F M+ G D + + +T A + S+ K VH+ I + + VSV N +
Sbjct: 330 GIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALV 389
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y+KC ++ A VF + E +VS NSM+AG +SL + M+ +
Sbjct: 390 AMYSKCGNVHDARRVFDTMPE--HNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPN 447
Query: 244 VTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVL 301
T +++LS+ V + +G + + + + + + +I + + G + A R++
Sbjct: 448 TITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRL---FFAMEAAGELP 343
+ + W ++ + G+++ A++ F +E P
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAP 552
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 36/252 (14%)
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS-- 297
F L + T +LL + + L+ G+ +H+ + N +YSKCG + +
Sbjct: 5 FPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64
Query: 298 -----------------------------ARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
AR +FD I VS+ +I+ YA +G+
Sbjct: 65 TSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRP 124
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
ALRLF + D T+ +I CG + L + + G V NA++
Sbjct: 125 ALRLFAEVRELRFGLDGFTLSGVIIACGDD--VGLVRQLHCFVVVCGYDCYASVNNAVLA 182
Query: 389 MYSKCGSIGDARELFYALPE---KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
YS+ G + +AR +F + E + VSW MI C + E +EA++LF +++ L+ +
Sbjct: 183 CYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVD 242
Query: 446 RVTFLAVLQACT 457
T +VL A T
Sbjct: 243 MFTMASVLTAFT 254
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 310/600 (51%), Gaps = 32/600 (5%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
PR+N I W+ IR + + A K L L+ +M + + P T+PF+ KACA L
Sbjct: 64 PRINPI-------AWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGL 116
Query: 68 SDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAML 113
+ ++IH H+ S F KC L+ A K+FDEM RD+ +WNAM+
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 114 VGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
GF+ L +V+ LF +MR + G+ + T++G+ A A L K+VH + +G
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D+ V + YAK + A VF + + V+W++M+ G + ++ +
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVF--DLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
M+ N VT V L C L GR VH + + GF LD++V NT+IS Y+
Sbjct: 295 FQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYA 354
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
K G + A F I + +S+ ++I+G +E+ RLF M +G PD+ T+L
Sbjct: 355 KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
+++ C AL G Y G N +CNAL+DMY+KCG + A+ +F + ++
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRD 474
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-- 468
+VSW TM+ G ++G EAL LF+ + E + P+ VT LA+L AC+H+G +++G +
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFN 534
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
S+ + D I P +DHY+CM DLL R G L EA DFV MP + D + GTLL AC
Sbjct: 535 SMSRGDFNVI---PRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWT 591
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+ N E+G V+ + L + V ++N Y+ RW+ A IR + K+ + K PG S
Sbjct: 592 YKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 232/496 (46%), Gaps = 32/496 (6%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEM 101
F + + C + +L+ Q+IH H++K + C+ ++ A +FDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 102 AVRDV--ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
+ +W+ M+ +A F E L L+Y M G++ T + +A + +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
K +HS D+ VC + YAKC +L+MA VF E R +V+WN+M++G
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVF--DEMPKRDMVAWNAMISGF 179
Query: 220 TYGDKFDDSLNFYRHM-MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ D + + M +G +++T+V + + AL +G+ VH + GF D
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ V ++ +Y+K I AR +FD + V+W+AMI GY + + EA +FF M
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 339 AGELPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ + V + ++ GC + G L G+ YA G ++ V N +I Y+K GS+
Sbjct: 300 NDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA F + K V+S+ ++I GC +N E+ LFH++ +RP+ T L VL AC
Sbjct: 360 CDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 457 THTGFLEKGWAI---SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
+H L G + ++ G + N + + + D+ + GKL A +M K
Sbjct: 420 SHLAALGHGSSCHGYCVVH----GYAVNTSI--CNALMDMYTKCGKLDVAKRVFDTMH-K 472
Query: 514 SDAGIWGTLLCACKIH 529
D W T+L IH
Sbjct: 473 RDIVSWNTMLFGFGIH 488
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 200/610 (32%), Positives = 314/610 (51%), Gaps = 28/610 (4%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
++ +T WN+ IR + L ++ QM + + P++ TFPF+ KACA ++
Sbjct: 1 MHHRTTAFLWNTLIR-GYSIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRK 59
Query: 73 SQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ +HG +VK S + C L A ++FDEM +D+ SWN M+ F+
Sbjct: 60 GREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSV 119
Query: 119 MGF-LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
G+ + L +F M G++ + +T+ + + + VH I +G+++D+
Sbjct: 120 NGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIF 179
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMM 236
+ N+ I YAK A VF ++ + VVSWN+M+A ++F+ ++ R M
Sbjct: 180 IANSLIDMYAKSGHSTEASNVFYKLDAK--NVVSWNAMIANFAQ-NRFELVAVGLVRQMQ 236
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
G + T ++L + + G+ +H+ IH G D+ V N L MY+K G +
Sbjct: 237 DYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLK 296
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR +FD R VS+ +I G++Q D E+L LF M+ G D V+ + +S C
Sbjct: 297 LARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACA 355
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
A++ GK + ++ V N+L+D Y+KCG IG AR +F + K V SW T
Sbjct: 356 NLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNT 415
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD- 475
MI G + GE A+DLF + + D+ + V+F+AVL AC+H G LEKG +Y D
Sbjct: 416 MILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGR-----KYFDE 470
Query: 476 -KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
K P HY+CM DLLGR G ++EA + ++ +PI DA IWG LL AC+I+ N+E+
Sbjct: 471 LKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLEL 530
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
+ A LF+L+P + Y ++N YA GRWD IR +MK VKK PG S I
Sbjct: 531 AAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGE 590
Query: 595 KTCTFTAEDR 604
+ F ++
Sbjct: 591 QAHAFVVGEK 600
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 320/612 (52%), Gaps = 32/612 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
RS WN I ++ + L F + EPN T + +AC L
Sbjct: 126 RSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGL 185
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+HG++++S + D +DCA +FDEM +DV SW+AM+ G+ Q
Sbjct: 186 QLHGYLIQSGLWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIGGYVQ-- 242
Query: 121 FLENV--LRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
+LE+ L++F M I D V ++ + +A ++ ++++ + VH I G+D+D+
Sbjct: 243 YLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLF 302
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V N+ I Y+KC D A VF E R VSWNS+++G K+ ++L M
Sbjct: 303 VKNSLIDMYSKCKDAGSAFEVFS--EMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRT 360
Query: 238 NGFRLDVTTVVSLLS---SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
G D T+V+ L F P + VH I G + + V+N+LI Y+KC
Sbjct: 361 EGIEADEVTLVNCLQICKYFAHP---YHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNL 417
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
I+ A +F R V W+ MI+G+A G DEA+ +F M E+P+ VT+++++
Sbjct: 418 IELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQA 477
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C S L+ W A GL V V A++DMYSKCG I +R+ F +P+K +++W
Sbjct: 478 CSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITW 537
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+TMIA +NG EAL L Q+ +++PN +T+L+VL AC+H G +E G ++
Sbjct: 538 STMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQ 597
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHLNI 532
D G+ +PE +HYSCM D+L R GKL +A++ ++ MP ++ A +WG LL AC+ + +
Sbjct: 598 DHGV--DPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSS 655
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
+GE Y + +LEP + A Y+ ++ YA G WD A ++ + + V+ G S+ H+
Sbjct: 656 TLGEKAVYQVLELEPLNLAGYLLASSMYASDGLWDNAARMKLLARERGVRAVAGYSIVHV 715
Query: 593 NGKTCTFTAEDR 604
+ K F A D+
Sbjct: 716 DSKAHKFVAGDK 727
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 269/558 (48%), Gaps = 61/558 (10%)
Query: 7 PPRLN-------RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLT--- 56
PP+ R +S + W +I+E + + H+ + + ++ I + L
Sbjct: 8 PPKAQASASMAMRFLSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTL 67
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMA 102
FP + KAC+ LS I + +H ++K+ F +KC LD A +FD M
Sbjct: 68 FPPVLKACSYLS-YIDGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMR 126
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSLL 160
RD SWN ++ G G L L F N R+ G + + T++ L QA ++ AK L
Sbjct: 127 SRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGL- 185
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+H + I G+ A SV N+++ YA D+ A ++F + E + V+SW++M+ G
Sbjct: 186 -QLHGYLIQSGLWASWSVQNSFLCMYADV-DMDCARILFDEMPE--KDVISWSAMIGG-- 239
Query: 221 YGDKFDDSLN---FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
Y +D + F + + + D +VS+L + + GRLVH I G D
Sbjct: 240 YVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDS 299
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D+ V N+LI MYSKC D SA +F + R VSW +++SG EAL L ++M
Sbjct: 300 DLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMR 359
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDN-YACSG--------GLKDNVMVCNALID 388
G D VT+++ L++ K+F + Y C G + N +V N+LID
Sbjct: 360 TEGIEADEVTLVN---------CLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLID 410
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
Y+KC I A E+F + VV W+TMIAG A G+ EA+ +F ++ E PN VT
Sbjct: 411 AYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVT 470
Query: 449 FLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
+ +LQAC+ + L++ WA +G++ E+ + + D+ + G+++ +
Sbjct: 471 IINLLQACSVSAELKRSMWAHG--AAIRRGLA--AEVAVGTAIVDMYSKCGEIEASRKAF 526
Query: 508 QSMPIKSDAGIWGTLLCA 525
+P K + W T++ A
Sbjct: 527 NQIPQK-NIITWSTMIAA 543
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 198/572 (34%), Positives = 301/572 (52%), Gaps = 24/572 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFV 86
+ R PN+ T +AC L +L +HG VK S +
Sbjct: 202 MVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYT 261
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KCD + A +F E+ +D+ SW +++ + + G E + LF M G+Q D V +
Sbjct: 262 KCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISC 321
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L + + K+ H+ + V + N IS YAKC + +A VF + +R
Sbjct: 322 LLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQR- 380
Query: 207 RTVVSWNSMV-AGCTYGDKFDDSLNFYRHMMY---NGFRLDVTTVVSLLSSFVCPEALVQ 262
SW+SMV A C G L YR M + + F D +++S++SS L
Sbjct: 381 -DTDSWSSMVVAYCKAGLDLK-CLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL 438
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ H + I + + SV N LISMY +CG+ D AR +F + + V+W+A+IS Y+
Sbjct: 439 GQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSH 498
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +AL L+ M G P+ T++S+IS C ALE G+ ++ GL+ ++ +
Sbjct: 499 LGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSI 558
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
C AL+DMY KCG +G AR++F ++ E+ VV+W MI+G ++GE ++AL LF + ++
Sbjct: 559 CTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNV 618
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+PN +TFLA+L AC H G ++KG + + S P L HY+CM DLLG+ G L+E
Sbjct: 619 KPNSLTFLAILSACCHAGLVDKGRELFTRMEE---YSLEPNLKHYACMVDLLGKSGHLQE 675
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A D V +MPI+ D GIWGTLL ACK+H N E+G VA F +P + Y+ M+N Y
Sbjct: 676 AEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGS 735
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
+W+ + +R MMK + V+K G S I G
Sbjct: 736 AEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 247/532 (46%), Gaps = 30/532 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS +R ++ TL R+M+ + P+ T P +A A A+L L +H + V
Sbjct: 75 WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134
Query: 82 KSP-----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG---- 120
+ + +C + A ++FDEM RDV +W A++ G G
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L ++R+ + G + + T+ +A LS+ +H FG+ GV SV +
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVS 254
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ S Y KCD + A ++F + E + +VSW S++ + ++ + M +G
Sbjct: 255 SLFSMYTKCDSTEDARILFPELPE--KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGL 312
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D + LL+ + G+ H+ + F V + N LISMY+KC +D A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP---DLVTVLSMISGCGQ 357
+F + R SW++M+ Y + G + L L+ M+ + D +++S+IS C +
Sbjct: 373 VFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G L LG+ Y+ +N V NALI MY +CG+ AR++F + K VV+W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+ + G +AL L+ Q++ ++PN T ++V+ +C + LE G +I K
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG---ELIHSHVKD 549
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ +L + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 15/235 (6%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ ++ + W++ I + + LLL+ QM ++PN+ T + +CA L+ L +
Sbjct: 480 MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEH 539
Query: 73 SQMIHGHI--------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++IH H+ + ++KC +L A K+FD M RDV +WN M+ G+
Sbjct: 540 GELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGM 599
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G L+LF M ++ + +T + + A HA + + + + ++ ++
Sbjct: 600 HGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKH 659
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ K L+ AE V + + W +++ C D F+ L +
Sbjct: 660 YACMVDLLGKSGHLQEAEDVVSAMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAK 713
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 199/616 (32%), Positives = 318/616 (51%), Gaps = 23/616 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W + I VN +++ + L LF +M+ Q+++ + K C + +Y +HG
Sbjct: 83 WTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFS 142
Query: 81 VK-----SPFVKCDRLDCAYKI---------FDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK S FV LD KI FDEM R+ +W A++ G + G+ E L
Sbjct: 143 VKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGL 202
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M ++ D +A+ + L+ +S+H+ + G D + V N+ + Y
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMY 262
Query: 187 AKCDDLKMAELVFCGIEERLRT--VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
KC L F ++RT VVSW ++V K D L ++ M + +
Sbjct: 263 NKCGKLDYGLHTF----RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNE 318
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T +++S L G +H+H + GF +SV N+++++YSKCG++ S +F
Sbjct: 319 YTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCS 378
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R ++W+ +I+ Y+Q G +EA M + G P+ + S++S CG LE G
Sbjct: 379 MKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG 438
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K + S GL+ MVC+ALI MY+KCGSI +A ++F + ++SWT MI+G A +
Sbjct: 439 KQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEH 498
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EA++LF + ++ LRP+ VTF+ VL AC+H G ++ G+ D I+ P
Sbjct: 499 GHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHIT--PSK 556
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY CM DLL R G+L +A ++SMPI+ D +W TLL AC+IH +++ G+ A + K
Sbjct: 557 EHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK 616
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P+ A ++ +AN +A G+W ANIR +MK V K PG S + F + DR
Sbjct: 617 LDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDR 676
Query: 605 YHAESELTYPVLDCLA 620
H + E Y +L+ LA
Sbjct: 677 SHPQGEDIYNILEELA 692
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 198/441 (44%), Gaps = 10/441 (2%)
Query: 27 REAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV 86
R+ V +N T+L K ND + T P A S+ + + + V
Sbjct: 6 RQHVKRN---FTVLAVAGAKTNDNPRHLYTKPLSLTLNAHFSNKV--DLAEANNQLKILV 60
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQAD-FVTV 144
K + L A +FD++ RD SW ++ G+ LRLF MRL ++ D F+
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+GL + +L ++H F + G+ V V + + Y K ++ + VF E
Sbjct: 121 LGLKTCGLGLNYL-YGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVF--DEM 177
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R V+W +++ G + L ++ M + D L + AL GR
Sbjct: 178 PTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGR 237
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H+ + GFD + V N+L +MY+KCG +D F + VSWT +++ Y Q G
Sbjct: 238 SIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMG 297
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
D L+ F M A+ +P+ T ++IS C L+ G+ + G + + V N
Sbjct: 298 KEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVAN 357
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+++ +YSKCG + ++F ++ + +++W+T+IA + G EA + ++ +P
Sbjct: 358 SIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKP 417
Query: 445 NRVTFLAVLQACTHTGFLEKG 465
N +VL C LE+G
Sbjct: 418 NEFALASVLSVCGSMAILEQG 438
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
P L L + H+ +D++ N + + K + AR LFD + R VSWT +
Sbjct: 27 PRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNI 86
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM-ISGCGQSGALELGKWFDNYACSGG 375
ISGY D EALRLF M EL +LS+ + CG G ++ G
Sbjct: 87 ISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXG 146
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
L ++V V +AL+DMY K G IG + ++F +P + V+WT +I G G L F
Sbjct: 147 LVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFS 206
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+ + + + L+A +G L G +I Q KG N + + + +
Sbjct: 207 GMGRSKVEYDSYAYAIALKASADSGALNHGRSIH-TQTLKKGFDENSFVAN--SLTTMYN 263
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ GKL L + M D W T++ A
Sbjct: 264 KCGKLDYGLHTFRKMRTL-DVVSWTTIVTA 292
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R R+ + W + + + + L F++M+ +++ PN TF + CA + L
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 72 YSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ + +H H++ FV KC L K+F M RD+ +W+ ++ ++
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q+G+ E MR G + + + + L K +H+ + +G++
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
VC+ I YAKC + A +F ++ ++SW +M++G +++ + ++
Sbjct: 456 VCSALIIMYAKCGSIAEASKIF--MDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQK 513
Query: 238 NGFRLDVTTVVSLLSS 253
G R D T + +L++
Sbjct: 514 VGLRPDSVTFIGVLTA 529
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 330/642 (51%), Gaps = 22/642 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ + WNS I + ++ + L LF +M++ + PN TF +AC S
Sbjct: 274 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 333
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH ++KS + + ++ A IF M D SWN+ML G
Sbjct: 334 IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSG 393
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F Q G L+ ++ MR G + D V V+ + A+ + + +H++ + G+D+D
Sbjct: 394 FVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSD 453
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V N+ + YAK +K + +F + ++ VVSW +++AG +L +R +
Sbjct: 454 LQVGNSLVDMYAKFCSMKYMDCIFDKMPDK--DVVSWTTIIAGHAQNGSHSRALELFREV 511
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G LDV + S+L + + + + +HS+ I G D+ + N ++ +Y +CG++
Sbjct: 512 QLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNV 570
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
D A +F+ I + VSWT+MIS Y G +EAL LF M+ G PD ++++S++S
Sbjct: 571 DYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAA 630
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL+ GK + G + + L+DMY++CG++ +R +F + K +V WT
Sbjct: 631 ASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWT 690
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYD 474
+MI ++G A+DLF ++ + + P+ + F+AVL AC+H+G + +G + ++Y+
Sbjct: 691 SMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 750
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
P +HY C+ DLLGR L+EA FV+ M ++ A +W LL AC+IH N E+
Sbjct: 751 ---YQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKEL 807
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
GE A L +++P + YV ++N YA RW V +R MK + +KK PG S +
Sbjct: 808 GEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGN 867
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALH-SREEAYSSHLKWI 635
K TF A D+ H +S Y L + ++E Y + K++
Sbjct: 868 KVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFV 909
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 268/552 (48%), Gaps = 29/552 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI WN+ I V E +L L+R+M+ + I + TFP I KAC L D +H
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQMGFL 122
G +K +V KC+ L+ A ++FD M + DV SWN+M+ ++ G
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 299
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
LRLF M+ + + T + QA + + +H+ + +V V N
Sbjct: 300 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 359
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I+ YA+ + A +F +++ +SWNSM++G + ++L FY M G +
Sbjct: 360 IAMYARFGKMGEAANIFYNMDD--WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP 417
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D+ V+S++++ + G +H++ + G D D+ V N+L+ MY+K + +F
Sbjct: 418 DLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIF 477
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + D+ VSWT +I+G+AQ G AL LF ++ G D++ + S++ C +
Sbjct: 478 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLIS 537
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
K +Y GL D V+ N ++D+Y +CG++ A +F + K VVSWT+MI+
Sbjct: 538 SVKEIHSYIIRKGLSDLVLQ-NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYV 596
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISY 480
NG EAL+LFH + E + P+ ++ +++L A L+KG I +I+ KG
Sbjct: 597 HNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR---KGFVL 653
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
L S + D+ R G L+++ + + K D +W +++ A +H G
Sbjct: 654 EGSLA--STLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMH---GCGRAAID 707
Query: 541 CLFKLEPHSAAP 552
++E S AP
Sbjct: 708 LFRRMEDESIAP 719
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 245/515 (47%), Gaps = 28/515 (5%)
Query: 33 NEAHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------- 84
NEA ++L LF + + + + + C L Q +H H++ S
Sbjct: 93 NEAFQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVF 151
Query: 85 --------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
+ KC L A K+FD M + + +WNAM+ + G L L+ MR+ G
Sbjct: 152 LSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSG 211
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
I D T + +A K VH I G + V V N+ + Y KC+DL A
Sbjct: 212 IPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 271
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
+F + E+ VVSWNSM++ + + ++L + M + T V+ L +
Sbjct: 272 QLFDRMPEK-EDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACED 330
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
+ QG +H+ + + ++V V N LI+MY++ G + A +F + D +SW +M
Sbjct: 331 SSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSM 390
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
+SG+ Q G EAL+ + M AG+ PDLV V+S+I+ +SG G YA GL
Sbjct: 391 LSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGL 450
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
++ V N+L+DMY+K S+ +F +P+K VVSWTT+IAG A NG AL+LF +
Sbjct: 451 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 510
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLL 494
+ + + + ++L AC+ + I II+ KG+S +L + + D+
Sbjct: 511 VQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR---KGLS---DLVLQNGIVDVY 564
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G G + A + + K D W +++ +C +H
Sbjct: 565 GECGNVDYAARMFELIEFK-DVVSWTSMI-SCYVH 597
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+ + + W S I V+ A++ L LF MK+ +EP++++ I A A LS
Sbjct: 575 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 634
Query: 69 DLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + IHG +++ FV +C L+ + +F+ + +D+ W +M+
Sbjct: 635 ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMIN 694
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ G + LF M I D + + + A H+
Sbjct: 695 AYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 734
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 316/602 (52%), Gaps = 23/602 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I + LF +M++ I+P+++T + +S+L + Q +HG +
Sbjct: 138 WTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT---MLSLLFGVSELAHVQCLHGSAI 194
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
F+ KC ++ + K+FD M RD+ SWN+++ +AQ+G++ VL
Sbjct: 195 LYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLL 254
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L MR+ G + D T + A L L + +H + D D V + I Y
Sbjct: 255 LLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYL 314
Query: 188 KCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
K ++ +A +F E L + VV W +M++G D +L +R M+ G + T
Sbjct: 315 KGGNIDIAFRMF---ERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTAT 371
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S++++ + G VH + + +D++ N+L++M++KCG +D + ++FD +
Sbjct: 372 MASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMN 431
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R VSW AMI+GYAQ G + +AL LF M + + PD +T++S++ GC +G L LGKW
Sbjct: 432 KRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKW 491
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
++ GL+ ++V +L+DMY KCG + A+ F +P +VSW+ +I G +G+
Sbjct: 492 IHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGK 551
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL + + +E ++PN V FL+VL +C+H G +E+G I D GI+ P L+H
Sbjct: 552 GETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIA--PNLEH 609
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
++C+ DLL R G+++EA + + + G +L AC+ + N E+G+ +A + L+
Sbjct: 610 HACVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLK 669
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P A +V++A+ YA +W+ V T M+ +KK PG S I+G TF + H
Sbjct: 670 PMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFTDHNSH 729
Query: 607 AE 608
+
Sbjct: 730 PQ 731
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 228/471 (48%), Gaps = 20/471 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S+TIN +N+ I ++ + L + M + + + TFP + KAC+ L+
Sbjct: 31 SATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLS 90
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H I+ S + K D A K+FD M R+V W +++ +++ G
Sbjct: 91 LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGR 150
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ LF MR GIQ VT++ L H+ L H I G +D+++ N+
Sbjct: 151 VPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCL---HGSAILYGFMSDINLSNS 207
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+S Y KC +++ + +F +++ R +VSWNS+V+ + L + M GF
Sbjct: 208 MLSMYGKCRNIEYSRKLFDYMDQ--RDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFE 265
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T S+LS L GR +H + FDLD V +LI MY K G+ID A +
Sbjct: 266 PDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRM 325
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ D+ V WTAMISG Q G D+AL +F M G T+ S+I+ C Q G+
Sbjct: 326 FERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSY 385
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
LG Y L ++ N+L+ M++KCG + + +F + ++ +VSW MI G
Sbjct: 386 NLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGY 445
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISII 471
A NG +AL LF+++ P+ +T +++LQ C TG L G W S +
Sbjct: 446 AQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFV 496
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 35/288 (12%)
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
S+ A+I+ ++ +G + L + +M D T S++ C LG
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
GL + + ++LI+ Y+K G AR++F +PE+ VV WT++I + G EA
Sbjct: 96 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155
Query: 432 DLFHQLMELDLRPNRVTFLAVL--------QACTHTGFLEKGWAISI------------- 470
LF ++ ++P+ VT L++L C H + G+ I
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKC 215
Query: 471 --IQYDDKGISYNPELD--HYSCMADLLGRKGKLKEALDFVQSMPIKS---DAGIWGTLL 523
I+Y K Y + D ++ + + G + E L +++M I+ D +G++L
Sbjct: 216 RNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVL 275
Query: 524 CACKIHLNIEIGE----YVAYCLFKLEPHSAAPYVEMANKYALGGRWD 567
+++G + F L+ H + M Y GG D
Sbjct: 276 SVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVM---YLKGGNID 320
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 331/642 (51%), Gaps = 22/642 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ + WNS I + ++ + L LF +M++ + PN TF +AC S
Sbjct: 238 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 297
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH ++KS + + ++ A IF M D SWN+ML G
Sbjct: 298 IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSG 357
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F Q G L+ ++ MR G + D V V+ + A+ + + +H++ + G+D+D
Sbjct: 358 FVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSD 417
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V N+ + YAK +K + +F + ++ VVSW +++AG +L +R +
Sbjct: 418 LQVGNSLVDMYAKFCSMKYMDCIFDKMPDK--DVVSWTTIIAGHAQNGSHSRALELFREV 475
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G LDV + S+L + + + + +HS+ I G D+ + N ++ +Y +CG++
Sbjct: 476 QLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNV 534
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
D A +F+ I + VSWT+MIS Y G +EAL LF M+ G PD ++++S++S
Sbjct: 535 DYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAA 594
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL+ GK + G + + L+DMY++CG++ +R +F + K +V WT
Sbjct: 595 ASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWT 654
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYD 474
+MI ++G A+DLF ++ + + P+ + F+AVL AC+H+G + +G + ++Y+
Sbjct: 655 SMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 714
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
P +HY+C+ DLLGR L+EA FV+ M ++ A +W LL AC+IH N E+
Sbjct: 715 ---YQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKEL 771
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
GE A L +++P + YV ++N Y+ RW V +R MK + +KK PG S +
Sbjct: 772 GEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGN 831
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALH-SREEAYSSHLKWI 635
K TF A D+ H +S Y L + ++E Y + K++
Sbjct: 832 KVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFV 873
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 269/552 (48%), Gaps = 29/552 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI WN+ I V E +L L+R+M+ + I + TFP I KAC L D Y +H
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVH 203
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQMGFL 122
G +K +V KC+ L+ A ++FD M + DV SWN+M+ ++ G
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 263
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
LRLF M+ + + T + QA + + +H+ + +V V N
Sbjct: 264 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 323
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I+ YA+ + A +F +++ +SWNSM++G + ++L FY M G +
Sbjct: 324 IAMYARFGKMGEAANIFYNMDD--WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP 381
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D+ V+S++++ + G +H++ + G D D+ V N+L+ MY+K + +F
Sbjct: 382 DLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIF 441
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + D+ VSWT +I+G+AQ G AL LF ++ G D++ + S++ C +
Sbjct: 442 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLIS 501
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
K +Y GL D V+ N ++D+Y +CG++ A +F + K VVSWT+MI+
Sbjct: 502 SVKEIHSYIIRKGLSDLVLQ-NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYV 560
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISY 480
NG EAL+LFH + E + P+ ++ +++L A L+KG I +I+ KG
Sbjct: 561 HNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR---KGFVL 617
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
L S + D+ R G L+++ + + K D +W +++ A +H G
Sbjct: 618 EGSLA--STLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMH---GCGRAAID 671
Query: 541 CLFKLEPHSAAP 552
++E S AP
Sbjct: 672 LFRRMEDESIAP 683
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 245/515 (47%), Gaps = 28/515 (5%)
Query: 33 NEAHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------- 84
NEA ++L LF + + + + + C L Q +H H++ S
Sbjct: 57 NEAFQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVF 115
Query: 85 --------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
+ KC L A K+FD M + + +WNAM+ + G L L+ MR+ G
Sbjct: 116 LSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSG 175
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
I D T + +A K VH I G + V V N+ + Y KC+DL A
Sbjct: 176 IPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 235
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
+F + E+ VVSWNSM++ + + ++L + M + T V+ L +
Sbjct: 236 QLFDRMPEK-EDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACED 294
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
+ QG +H+ + + ++V V N LI+MY++ G + A +F + D +SW +M
Sbjct: 295 SSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSM 354
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
+SG+ Q G EAL+ + M AG+ PDLV V+S+I+ +SG G YA GL
Sbjct: 355 LSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGL 414
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
++ V N+L+DMY+K S+ +F +P+K VVSWTT+IAG A NG AL+LF +
Sbjct: 415 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 474
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLL 494
+ + + + ++L AC+ + I II+ KG+S +L + + D+
Sbjct: 475 VQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR---KGLS---DLVLQNGIVDVY 528
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G G + A + + K D W +++ +C +H
Sbjct: 529 GECGNVDYAARMFELIEFK-DVVSWTSMI-SCYVH 561
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+ + + W S I V+ A++ L LF MK+ +EP++++ I A A LS
Sbjct: 539 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 598
Query: 69 DLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + IHG +++ FV +C L+ + +F+ + +D+ W +M+
Sbjct: 599 ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMIN 658
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ G + LF M I D + + + A H+
Sbjct: 659 AYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 698
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/571 (32%), Positives = 300/571 (52%), Gaps = 25/571 (4%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
F+A A AKL + K R D A K+FD + D WN +L G
Sbjct: 150 FVASALAKL-----------------YFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
LE +R+ R ++ D T+ +AA A H+++ + VH +G+ G+ V
Sbjct: 193 SEALEAFVRMVDAGR---VRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHV 249
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+S Y+KC D+ A+ +F ++ +V++N++++G + + S+ ++ + +
Sbjct: 250 VTGLMSLYSKCGDMDSAQFLFDRMDNP--DLVAYNALISGYSVNGMVESSVELFKELTAS 307
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G+R + +T+V+++ + + R +H+ + D D V L ++Y + D++SA
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R +FD + ++T SW AMISGYAQ G + A+ LF M+ P+ +T+ S +S C
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHL 427
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GAL LGKW L+ NV V ALIDMY+KCGSI +AR +F + K VVSW MI
Sbjct: 428 GALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMI 487
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+G L+G+ EAL L+ +++ + P TFL+V+ AC+H G +++G + + ++ I
Sbjct: 488 SGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRI 547
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS-DAGIWGTLLCACKIHLNIEIGEY 537
+ P ++H +CM DLLGR GKL EAL+ + P + G+WG LL AC +H N ++ +
Sbjct: 548 T--PGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKL 605
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
+ LF+L+ +A YV ++N Y + A +R K ++ K PG +L I +
Sbjct: 606 ASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPH 665
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F A D H +SE Y L+ L E Y
Sbjct: 666 VFMAGDHLHPQSEAIYSYLERLTAKMIEAGY 696
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
R +H + G+ D V + L +Y K D AR +FD + + W +++G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192
Query: 323 KGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
EAL F M AG + PD T+ S + ++ + +G+ Y GL ++
Sbjct: 193 ----SEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V L+ +YSKCG + A+ LF + +V++ +I+G ++NG +++LF +L
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308
Query: 442 LRPNRVTFLAVL 453
RPN T +AV+
Sbjct: 309 WRPNSSTLVAVI 320
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 58/321 (18%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
LF+++ + PN+ T + + + ++ +H +VK+ +
Sbjct: 300 LFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYC 359
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
+ + ++ A IFD M + + SWNAM+ G+AQ G E + LF M+ + +Q + +T+
Sbjct: 360 RLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISS 419
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
A H LSL K VH ++ +V V I YAKC + A +F ++
Sbjct: 420 TLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDN-- 477
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ VVSWN+M++G + ++L Y+ M+ +T +S++ + C
Sbjct: 478 KNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVI--YAC---------- 525
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-----WTAMISGYA 321
SHG G +D + +F + + R++ T M+
Sbjct: 526 -SHG----------------------GLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLG 562
Query: 322 QKGDLDEALRLF--FAMEAAG 340
+ G L+EAL L F A G
Sbjct: 563 RAGKLNEALELISEFPQSAIG 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN+ I + LF+ M++ +++PN +T ACA L L + +H
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVH 437
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I K + KC + A IFD M ++V SWNAM+ G+ G
Sbjct: 438 RIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGA 497
Query: 124 NVLRLFYNM---RLVGIQADFVTVM 145
L+L+ +M R++ + F++V+
Sbjct: 498 EALKLYKDMLDARILPTSSTFLSVI 522
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 298/600 (49%), Gaps = 72/600 (12%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
V S + K +D + + FD + RD SW M+VG+ +G +R+ M GI+
Sbjct: 86 VLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPS 145
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF- 199
T+ + + + L K VHSF + +G+ +VSV N+ ++ YAKC D MA++VF
Sbjct: 146 QFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFD 205
Query: 200 ---------------------------CGIEERL-RTVVSWNSMVAGCTYGDKFDD--SL 229
E+ R +V+WNSM++G Y + D +L
Sbjct: 206 RMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISG--YNQRGYDLRAL 263
Query: 230 NFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
+ + M+ + D T+ S+LS+ E L G +HSH + GFD+ V+N LISM
Sbjct: 264 DMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISM 323
Query: 289 YSKCGDIDSARVL---------------------------------FDGICDRTRVSWTA 315
YS+CG +++AR L FD + DR V+WTA
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTA 383
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
MI GY Q G EA+ LF +M + P+ T+ +M+S +L GK A G
Sbjct: 384 MIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSG 443
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLF 434
+V V NALI MY+K GSI A F + E+ VSWT+MI A +G EAL+LF
Sbjct: 444 EIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD-DKGISYNPELDHYSCMADL 493
++ LRP+ +T++ V ACTH G + +G + D DK I P L HY+CM DL
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII---PTLSHYACMVDL 560
Query: 494 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPY 553
GR G L+EA +F++ MPI+ D WG+LL AC+++ NI++G+ A L LEP ++ Y
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAY 620
Query: 554 VEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTY 613
+AN Y+ G+W+ A IR MK +VKK G S + K F ED H + Y
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIY 680
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 211/482 (43%), Gaps = 84/482 (17%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N + HK + + +M + IEP+ T + + A L + +H IV
Sbjct: 114 WTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIV 173
Query: 82 K--------------SPFVKC----------DR---------------------LDCAYK 96
K + + KC DR +D A
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMA 233
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAK 155
F++MA RD+ +WN+M+ G+ Q G+ L +F M R + D T+ + A + +
Sbjct: 234 QFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLE 293
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC---------------DDLKM------ 194
L + + +HS + G D V N IS Y++C DLK+
Sbjct: 294 KLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 195 ------------AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
A+ +F +++ R VV+W +M+ G + +++N +R M+ R
Sbjct: 354 LDGYIKLGDMNEAKNIFDSLKD--RDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRP 411
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T+ ++LS +L G+ +H + G VSV N LI+MY+K G I SA F
Sbjct: 412 NSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAF 471
Query: 303 DGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
D I C+R VSWT+MI AQ G +EAL LF M G PD +T + + S C +G +
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 362 ELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
G+ +FD + + ++D++ + G + +A+E +P E VV+W ++++
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS 591
Query: 420 GC 421
C
Sbjct: 592 AC 593
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 158/356 (44%), Gaps = 71/356 (19%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
NT +S+YAK D+ + C +RL R VSW +M+ G ++ ++ MM
Sbjct: 84 NTVLSAYAKRGDMDSS----CEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMR 139
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G T+ ++L+S L G+ VHS + G +VSV N+L++MY+KCGD
Sbjct: 140 EGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 298 ARVLFD-------------------------------GICDRTRVSWTAMISGYAQKGDL 326
A+V+FD + +R V+W +MISGY Q+G
Sbjct: 200 AKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYD 259
Query: 327 DEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
AL +F M L PD T+ S++S C L +G+ ++ + G + +V NA
Sbjct: 260 LRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNA 319
Query: 386 LIDMYSKCGSIGDAREL---------------------------------FYALPEKIVV 412
LI MYS+CG + AR L F +L ++ VV
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVV 379
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+WT MI G +G + EA++LF ++ + RPN T A+L + L G I
Sbjct: 380 AWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQI 435
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 36/242 (14%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NT++S Y+K GD+DS+ FD + R VSWT MI GY G +A+R+ M G
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG-------- 394
P T+ ++++ + LE GK ++ GL+ NV V N+L++MY+KCG
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203
Query: 395 --------------------SIGD---ARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
+G A F + E+ +V+W +MI+G G + AL
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRAL 263
Query: 432 DLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAIS----IIQYDDKGISYNPELDH 486
D+F +++ L P+R T +VL AC + L G I +D GI N +
Sbjct: 264 DMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISM 323
Query: 487 YS 488
YS
Sbjct: 324 YS 325
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 31/122 (25%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELF-----------------YA------------ 405
GL +V + N L+++YSK G AR+LF YA
Sbjct: 44 GLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFF 103
Query: 406 --LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
LP++ VSWTTMI G G++ +A+ + ++M + P++ T VL + T LE
Sbjct: 104 DRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLE 163
Query: 464 KG 465
G
Sbjct: 164 TG 165
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/669 (30%), Positives = 326/669 (48%), Gaps = 82/669 (12%)
Query: 21 QWNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
+WNS + E + H L +F+++ + ++ + K C ++ D+ IHG
Sbjct: 640 KWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGC 699
Query: 80 IVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++K F +C L+ A ++F EM + WN ++ Q L+
Sbjct: 700 LIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKG 759
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF M+ ++A+ T++ + QA L+ K +H + G+D+DVS+CN IS
Sbjct: 760 VELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISM 819
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVA---------------------------- 217
Y+K L++A VF +E R SWNSM++
Sbjct: 820 YSKNGKLELARRVFDSMENR--NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIV 877
Query: 218 --GCTYGDKF-----DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
C F ++ LN + M GF+ + +++ S+L + L G+ H +
Sbjct: 878 TWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYV 937
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ GFD DV V +LI MY K + SA+ +FD + +R +W +++SGY+ KG ++AL
Sbjct: 938 LRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 997
Query: 331 RLFFAMEAAGELPDLVTVLSMISG------------------------CGQSGALELGKW 366
RL ME G PDLVT MISG C L+ GK
Sbjct: 998 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKE 1057
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G ++V V ALIDMYSK S+ +A ++F + K + SW MI G A+ G
Sbjct: 1058 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGL 1117
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PEL 484
EA+ +F+++ ++ + P+ +TF A+L AC ++G + +GW +D Y P L
Sbjct: 1118 GKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY----FDSMITDYRIVPRL 1173
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY CM DLLGR G L EA D + +MP+K DA IWG LL +C+IH N+ E A LFK
Sbjct: 1174 EHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFK 1233
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP+++A Y+ M N Y++ RW+ + ++R +M V+ S IN + F+++++
Sbjct: 1234 LEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEK 1293
Query: 605 YHAESELTY 613
H ++ Y
Sbjct: 1294 PHPDAGKIY 1302
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 136/298 (45%), Gaps = 19/298 (6%)
Query: 183 ISSYAKCDDLKMAELVF-CGIEERLRTVVSWNSMVAGCTYGDKFDDS-------LNFYRH 234
ISSY D A +VF G+ R + WNS V ++F S L ++
Sbjct: 614 ISSYLGFGDFWSAAMVFYVGLP---RNYLKWNSFV------EEFKSSAGSLHIVLEVFKE 664
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ G D L + + G +H I GFDLDV + L++ Y +C
Sbjct: 665 LHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG 724
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
++ A +F + + + W I Q L + + LF M+ + + T++ ++
Sbjct: 725 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 784
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
CG+ GAL K Y GL +V +CN LI MYSK G + AR +F ++ + SW
Sbjct: 785 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 844
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
+MI+ A G +A LF++L D++P+ VT+ +L G+ E+ ++I+Q
Sbjct: 845 NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEE--VLNILQ 900
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 13/248 (5%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY-AQKGDLDEALRLFFAMEAAGE 341
LIS Y GD SA ++F R + W + + + + G L L +F + G
Sbjct: 611 KNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGV 670
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
+ D + C + + LG G +V + AL++ Y +C + A +
Sbjct: 671 VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQ 730
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F+ +P + W I + + + ++LF ++ L+ T + VLQAC G
Sbjct: 731 VFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGA 790
Query: 462 LEKGWAIS--IIQYD-DKGISY-NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
L I + ++ D +S NP + YS + GKL+ A SM ++ +
Sbjct: 791 LNAAKQIHGYVFRFGLDSDVSLCNPLISMYS-------KNGKLELARRVFDSMENRNTSS 843
Query: 518 IWGTLLCA 525
W +++ +
Sbjct: 844 -WNSMISS 850
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 38/174 (21%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE----------------------- 51
++ I WNS + K L L QM++ I+
Sbjct: 973 KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAF 1032
Query: 52 -PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYK 96
PN+ + + +ACA LS L + IH +++ F+ K L A+K
Sbjct: 1033 MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHK 1092
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+F + + +ASWN M++GFA G + + +F M+ VG+ D +T L A
Sbjct: 1093 VFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSA 1146
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 312/586 (53%), Gaps = 14/586 (2%)
Query: 60 IAKACAKLSDL--IYSQMIHGHIVKS-----PFVKCDRLDCAYKIFDEMAVRDVASWNAM 112
+ K C L I++QMI I K F+ + A +F ++ + ++N M
Sbjct: 37 LLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPNEYAFNIM 96
Query: 113 LVGFAQMGFLENV-LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
+ G N+ + +Y M+ GI+ + T + A + L+ + HS + G
Sbjct: 97 IRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSG 156
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+ AD V ++ I+ Y++C +L A VF I E+ +VSWNSM++G + D++
Sbjct: 157 LCADGHVRHSLITMYSRCGELGCARRVFDEISEK--DLVSWNSMISGYSRMGYAGDAVGL 214
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ M GF D T+VS+L + L G + + DL+ V + LI MY K
Sbjct: 215 FGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGK 274
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CGD+ SAR +FD + + V+W AMI+GYAQ G DEA+ LF M +G PD +T++ +
Sbjct: 275 CGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGV 334
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+S C GAL+ GKW D YA GL++++ V ALIDMY+KCGS+ DA +F +P+K
Sbjct: 335 LSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNE 394
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELD--LRPNRVTFLAVLQACTHTGFLEKGWAIS 469
VSW MI+ A +G E+L LF ++ + +RPN ++F+ VL AC H G +++G +
Sbjct: 395 VSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLF 454
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G+ P+++H+SCM DLL R G + EA DF++ MP K D + G LL AC+
Sbjct: 455 DLMSSSFGLV--PKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKR 512
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+++ E V + L ++EP ++ Y+ + +A RWD A +R +M++ V K PG S
Sbjct: 513 RNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSW 572
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
I + F A D H S+ V++ L + E Y + ++
Sbjct: 573 IEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVEGYGPKVDFL 618
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 212/424 (50%), Gaps = 24/424 (5%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------- 84
T+ + QMK I PNN T+PF+ ACA L L + Q H ++KS
Sbjct: 110 TIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLIT 169
Query: 85 -FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+ +C L CA ++FDE++ +D+ SWN+M+ G+++MG+ + + LF MR G + D +T
Sbjct: 170 MYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMT 229
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
++ + A L L + F + +D + V + I Y KC DL A VF
Sbjct: 230 LVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVF---- 285
Query: 204 ERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+R+ + VV+WN+M+ G D+++ + M +G D T+V +LS+ AL
Sbjct: 286 DRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALD 345
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G+ + ++ G D+ V LI MY+KCG +D A +F+ + + VSW AMIS A
Sbjct: 346 FGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALA 405
Query: 322 QKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKD 378
G E+L LF M E P+ ++ + ++S C +G ++ G+ FD + S GL
Sbjct: 406 FHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVP 465
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQL 437
+ + ++D+ ++ G + +A + +PEK V ++ C + + H L
Sbjct: 466 KIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHML 525
Query: 438 MELD 441
+E++
Sbjct: 526 LEME 529
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I A + LF +M+ EP+ +T I AC L DL I G +V
Sbjct: 195 WNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVV 254
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC L A ++FD M +DV +WNAM+ G+AQ G + +
Sbjct: 255 ENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAII 314
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF MR G+ D +T++G+ A L K + ++ G+ D+ V I YA
Sbjct: 315 LFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYA 374
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG--FRLDVT 245
KC L A VF + + + VSWN+M++ + + +SL+ ++ M G R +
Sbjct: 375 KCGSLDDALRVFEDMPQ--KNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDI 432
Query: 246 TVVSLLSSFVCPEALVQGR 264
+ + +LS+ V + +GR
Sbjct: 433 SFIGVLSACVHAGLVDEGR 451
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 208/651 (31%), Positives = 323/651 (49%), Gaps = 57/651 (8%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S I +WN I + + L +F++M + + + N + ++ +L+ +++ +M
Sbjct: 57 SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116
Query: 76 -----IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+ +++ +V+ L A ++F+ M RDV SWN +L G+AQ G +++ R+F
Sbjct: 117 PERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFD 176
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIGVDADVSVCNTWISSY 186
M + + V+ L A + L L S ++ + VS N + +
Sbjct: 177 RM----PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL-------VS-WNCLLGGF 224
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
K + A F + ++R VVSWN+++ G + D++ R + DV T
Sbjct: 225 VKKKKIVEARQFFDSM--KVRDVVSWNTIITGYAQNGEIDEA----RQLFDESPVHDVFT 278
Query: 247 VVSLLSSFVCPEALVQGR--------------------LVHSHGIHYGFDL-------DV 279
+++S ++ + + R V + +L +V
Sbjct: 279 WTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNV 338
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
S NT+I+ Y++CG I A+ LFD + R VSW AMI+GY+Q G EALRLF ME
Sbjct: 339 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMERE 398
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G + + S +S C ALELGK GG + V NAL+ MY KCGSI +A
Sbjct: 399 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 458
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+LF + K +VSW TMIAG + +G EAL F + L+P+ T +AVL AC+HT
Sbjct: 459 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHT 518
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G ++KG D G+ P HY+CM DLLGR G L+EA + +++MP + DA IW
Sbjct: 519 GLVDKGRQYFHTMTQDYGV--RPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIW 576
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
GTLL A ++H N E+ E A +F +EP ++ YV ++N YA GRW V +R M+
Sbjct: 577 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 636
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
VKK PG S I KT TF+ D +H E + + L+ L L ++ Y S
Sbjct: 637 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVS 687
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 153/389 (39%), Gaps = 68/389 (17%)
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG--IHYGFDLDVSVINTLISMYS 290
RH NG + S S+F ++ Q ++ S + D D+ N IS Y
Sbjct: 12 RHTSLNGLKRRYNNANSA-SNFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYM 70
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
+ G A +F + + VS+ AMISGY + G+ + A LF E+P+
Sbjct: 71 RTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLF------DEMPE------ 118
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
+L W N +I Y + ++G ARELF +PE+
Sbjct: 119 ----------RDLVSW-----------------NVMIKGYVRNRNLGKARELFERMPERD 151
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
V SW T+++G A NG +A +F ++ E N V++ A+L A LE+ +
Sbjct: 152 VCSWNTILSGYAQNGCVDDARRVFDRMPE----KNDVSWNALLSAYVQNSKLEEACVLF- 206
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
G N L ++C+ +K K+ EA F SM ++ D W T++
Sbjct: 207 ------GSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVR-DVVSWNTIITG--YAQ 257
Query: 531 NIEIGEYVAYCLFKLEP-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N EI E A LF P H + M + Y + N R + P ++
Sbjct: 258 NGEIDE--ARQLFDESPVHDVFTWTAMVSGY--------IQNRMVEEARELFDRMPERNE 307
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDC 618
N + +R EL + V+ C
Sbjct: 308 VSWNAMLAGYVQGERVEMAKEL-FDVMPC 335
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 322/608 (52%), Gaps = 23/608 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I V + + + L LFR+M++ + N TF + S + IHG +
Sbjct: 216 WNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAAL 275
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC R++ A ++F M RD SWN +L G Q + L
Sbjct: 276 KSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALN 335
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F +M+ + D V+V+ L A+ + +L K VH++ I G+D+++ + NT I YA
Sbjct: 336 YFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYA 395
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +K F + E+ ++SW +++AG + +++N +R + G +D +
Sbjct: 396 KCCCVKHMGYAFECMHEK--DLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMI 453
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+L + C + + HG + DL D+ + N ++++Y + G D AR F+ I
Sbjct: 454 GSVLRA--CSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIR 511
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ VSWT+MI+ G EAL LF++++ PD + ++S +S +L+ GK
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G + ++L+DMY+ CG++ ++R++F+++ ++ ++ WT+MI ++G
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYDDKGISYNPELD 485
EA+ LF ++ + ++ P+ +TFLA+L AC+H+G + +G I++Y G P +
Sbjct: 632 GNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKY---GYQLEPWPE 688
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLL R L+EA FV+SMPIK + +W LL AC IH N E+GE A L +
Sbjct: 689 HYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQS 748
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+ ++ Y ++N +A GRW+ V +R MK N +KK PG S ++ K TF A D+
Sbjct: 749 DTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKS 808
Query: 606 HAESELTY 613
H +++ Y
Sbjct: 809 HPQTDDIY 816
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 202/408 (49%), Gaps = 16/408 (3%)
Query: 64 CAKLSDLIYSQMIHGHIVKSP------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
C + L Q +H ++KS + KC L A K+FDEM R + +WNA
Sbjct: 56 CVAVKALPQGQQLHARLLKSHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNA 115
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ F G + L+ MR++G+ D T + +A L +H + G
Sbjct: 116 MMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCG 175
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
V VCN I+ Y KC DL A ++F GI VSWNS+++ K ++L+
Sbjct: 176 FGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSL 235
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+R M G + T V+ L P + G +H + DV V N LI+MY+K
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAK 295
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG ++ A +F + R VSW ++SG Q +AL F M+ + + PD V+VL++
Sbjct: 296 CGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNL 355
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
I+ G+SG L GK YA GL N+ + N LIDMY+KC + F + EK +
Sbjct: 356 IAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDL 415
Query: 412 VSWTTMIAGCALNGEFVEALDLFH--QLMELDLRPNRVTFLAVLQACT 457
+SWTT+IAG A N +EA++LF Q+ +D+ P + +VL+AC+
Sbjct: 416 ISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIG--SVLRACS 461
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 232/467 (49%), Gaps = 19/467 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI WN+ + V+ + + + L+++M+ + + TFP + KAC L + IH
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDE--MAVRDVASWNAMLVGFAQMGF 121
G VK F KC L A +FD M D SWN+++ G
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGK 228
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L LF M+ VG+ ++ T + Q + L +H + ADV V N
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANA 288
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I+ YAKC ++ AE VF + R VSWN++++G + + D+LN++R M + +
Sbjct: 289 LIAMYAKCGRMEDAERVFASM--LCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQK 346
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D +V++L+++ L+ G+ VH++ I G D ++ + NTLI MY+KC +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYA 406
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + ++ +SWT +I+GYAQ EA+ LF ++ G D + + S++ C +
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ Y L D +M+ NA++++Y + G AR F ++ K +VSWT+MI C
Sbjct: 467 NFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCC 525
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
NG VEAL+LF+ L + +++P+ + ++ L A + L+KG I
Sbjct: 526 VHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 147/285 (51%), Gaps = 10/285 (3%)
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC LK A VF + ER T+ +WN+M+ K+ +++ Y+ M G +D
Sbjct: 89 YEKCGSLKDAVKVFDEMTER--TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDAC 146
Query: 246 TVVSLLSSFVCPEALVQGRL---VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T S+L + C AL + RL +H + GF V V N LI+MY KCGD+ ARVLF
Sbjct: 147 TFPSVLKA--CG-ALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLF 203
Query: 303 DGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
DGI VSW ++IS + +G EAL LF M+ G + T ++ + G
Sbjct: 204 DGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSF 263
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
++LG A +V V NALI MY+KCG + DA +F ++ + VSW T+++G
Sbjct: 264 VKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSG 323
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
N + +AL+ F + +P++V+ L ++ A +G L G
Sbjct: 324 LVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNG 368
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 133/278 (47%), Gaps = 12/278 (4%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL V +AL QG+ +H+ + L + L+ MY KCG + A +FD + +RT
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
+W AM+ + G EA+ L+ M G D T S++ CG G LG
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNGEF 427
A G + V VCNALI MY KCG +G AR LF + ++ VSW ++I+ G+
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+EAL LF ++ E+ + N TF+A LQ F++ G I + N D Y
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI-----HGAALKSNHFADVY 284
Query: 488 --SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + + + G++++A SM + D W TLL
Sbjct: 285 VANALIAMYAKCGRMEDAERVFASMLCR-DYVSWNTLL 321
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
RS I W S I V+ + L LF +KQ +I+P+++ A A LS L +
Sbjct: 511 RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGK 570
Query: 75 MIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG +++ F C ++ + K+F + RD+ W +M+ G
Sbjct: 571 EIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHG 630
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ LF M + D +T + L A H+
Sbjct: 631 CGNEAIALFKKMTDENVIPDHITFLALLYACSHS 664
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 308/557 (55%), Gaps = 16/557 (2%)
Query: 71 IYSQMIHGHIVKSPFVKC---DRLDCAYK--IFDEMAVRDVASWNAMLVGFAQM-GFLEN 124
I++QM+ I K F+ D D AY +F+++ ++ ++N ML G A +
Sbjct: 52 IHAQMLINSIPKPNFLLSKIIDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDF 111
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ L+Y ++ +G++A+ T L A + + L K H G+D D V ++ I+
Sbjct: 112 CVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLIT 171
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YA+C ++ A VF + +R +VSWNSM++G + +++ + M GF D
Sbjct: 172 MYARCGEMGFARKVFDEMGDR--DLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDE 229
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+VS+L + L GR V + +++ + + LI MY KCGD+ SAR +FD
Sbjct: 230 MTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDS 289
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ ++ V+W A+I+GYAQ G +EA+ LF M AG PD VT++ ++S C GAL+LG
Sbjct: 290 MPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLG 349
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
KW + +A GL+ +V V +ALIDMY+KCGS+ DA +F ++P K VSW MI+ A +
Sbjct: 350 KWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFH 409
Query: 425 GEFVEALDLFHQLMELD--LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN- 481
G+ EAL LF ++ + + ++PN +TF+ VL AC H G +++G + ++ +S+
Sbjct: 410 GQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQL----FESMNLSFGL 465
Query: 482 -PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P+++HYSCM DL R G L EA D ++ MP K D + G+LL AC+ N ++GE V
Sbjct: 466 VPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQ 525
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
++E ++ YV + YA RWD A +R +M++ V K PG S I F
Sbjct: 526 LFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFH 585
Query: 601 AEDRYHAESELTYPVLD 617
A D H S Y +L+
Sbjct: 586 AGDSLHNHSMNIYQLLN 602
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 199/376 (52%), Gaps = 11/376 (2%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K +LLK +H+ + +++ + N +S DL A LVF + + + ++N
Sbjct: 44 KSKNLLKQIHA---QMLINS-IPKPNFLLSKIIDLKDLAYASLVFNQLTKP--NIYAFNV 97
Query: 215 MVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
M+ G T K+D + Y + G + + T L + LV G++ H
Sbjct: 98 MLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKA 157
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G D D V ++LI+MY++CG++ AR +FD + DR VSW +MISGY++ G EA+ LF
Sbjct: 158 GLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLF 217
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M G PD +T++S++ CG G L LG+W + + ++ N + +ALIDMY KC
Sbjct: 218 MEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKC 277
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR +F ++P K VV+W +I G A NG EA+ LF+ + E P+RVT + VL
Sbjct: 278 GDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVL 337
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+ G L+ G + +KG+ ++ + S + D+ + G L +A+ +SMP K
Sbjct: 338 SACSTIGALDLGKWVE-THASEKGLQHDVYV--ASALIDMYAKCGSLDDAVRVFESMPHK 394
Query: 514 SDAGIWGTLLCACKIH 529
++ W ++ A H
Sbjct: 395 NEVS-WNAMISALAFH 409
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 196/386 (50%), Gaps = 19/386 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--------------GHIVKSPFV 86
L+ ++K ++ NN T+PF+ AC + L++ ++ H H + + +
Sbjct: 115 LYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYA 174
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
+C + A K+FDEM RD+ SWN+M+ G+++MGF + + LF MR G + D +T++
Sbjct: 175 RCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVS 234
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ A L L + V F + ++ + + + I Y KC DL A VF +
Sbjct: 235 VLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPN-- 292
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ VV+WN+++ G ++++ + M G D T++ +LS+ AL G+ V
Sbjct: 293 KDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWV 352
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
+H G DV V + LI MY+KCG +D A +F+ + + VSW AMIS A G
Sbjct: 353 ETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQA 412
Query: 327 DEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVC 383
EAL LF M + P+ +T + ++S C +G ++ G+ F++ S GL V
Sbjct: 413 QEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHY 472
Query: 384 NALIDMYSKCGSIGDARELFYALPEK 409
+ ++D+ ++ G + +A +L +P K
Sbjct: 473 SCMVDLCARAGLLYEAWDLIKKMPGK 498
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 23/337 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + + LF +M++ EP+ +T + AC L DL + + G ++
Sbjct: 197 WNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVL 256
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC L A ++FD M +DV +WNA++ G+AQ G +
Sbjct: 257 EKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIV 316
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF MR G D VT++ + A L L K V + G+ DV V + I YA
Sbjct: 317 LFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYA 376
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NG-FRLDVT 245
KC L A VF + + VSWN+M++ + + ++L+ +R M NG + +
Sbjct: 377 KCGSLDDAVRVFESMPH--KNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDI 434
Query: 246 TVVSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T + +LS+ V + +GR L S + +G V + ++ + ++ G + A L
Sbjct: 435 TFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKK 494
Query: 305 ICDRTRVSWTAMISGYAQK---GDLDE-ALRLFFAME 337
+ + + G Q+ D+ E ++LF ME
Sbjct: 495 MPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEME 531
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 299/573 (52%), Gaps = 29/573 (5%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
F+A A AKL + R + A K+FD + D WN +L G +
Sbjct: 159 FVASALAKL-----------------YFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSG 201
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
LE +R+ ++ D T+ + AA + ++ + VH+FG G+ V
Sbjct: 202 SEALEAFVRM---AGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
IS YAKC D++ A +F +E +V++N++++G + S+ ++ ++
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGP--DLVTYNALISGYSINGMVGSSVELFKELVGM 316
Query: 239 GFRLDVTTVVSLLS--SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
G R +T+V+L+ S E L +H+H + G D + V L ++Y + D+D
Sbjct: 317 GLRPSSSTLVALIPVHSPFGHEPLAG--CLHAHVVKAGLDANAPVSTALTTLYCRFNDMD 374
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
SAR FD + ++T SW AMISGYAQ G + A+ LF M+A P+ +T+ S +S C
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACA 434
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
Q GAL LGKW + L+ NV V ALIDMY KCGSI +AR +F ++ K VVSW
Sbjct: 435 QLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNV 494
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
MI+G L+G+ EAL L+ +M+ L P TFL+VL AC+H G +++G + D
Sbjct: 495 MISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDY 554
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS-DAGIWGTLLCACKIHLNIEIG 535
GI+ P ++H +CM DLLGR G+LKEA + + P + GIWG LL AC +H + ++
Sbjct: 555 GIT--PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLA 612
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
+ + LF+LEP + YV ++N Y ++ A +R K ++ K PG +L I +
Sbjct: 613 KLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDR 672
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F A DR H +S+ Y L+ L E Y
Sbjct: 673 PHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGY 705
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 205/437 (46%), Gaps = 22/437 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
WN+ + ++ +EA + + R + P++ T + A A++++ + +H
Sbjct: 192 WNTLL-AGLSGSEALEAFV--RMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGE 248
Query: 79 --------HIVK---SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
H+V S + KC ++CA +FD M D+ ++NA++ G++ G + + +
Sbjct: 249 KCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVE 308
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + +G++ T++ L H L +H+ + G+DA+ V + Y
Sbjct: 309 LFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYC 368
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ +D+ A F + E +T+ SWN+M++G + ++ ++ M R + T+
Sbjct: 369 RFNDMDSARRAFDAMPE--KTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTI 426
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S LS+ AL G+ VH + +L+V V+ LI MY KCG I AR +FD + +
Sbjct: 427 SSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDN 486
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW- 366
+ VSW MISGY G EAL+L+ M A P T LS++ C G ++ G
Sbjct: 487 KNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTV 546
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS--WTTMIAGCALN 424
F + G+ + C ++D+ + G + +A EL P+ V W ++ C ++
Sbjct: 547 FRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVH 606
Query: 425 GEFVEALDLFHQLMELD 441
+ A +L EL+
Sbjct: 607 KDGDLAKLASQKLFELE 623
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H+ + GF D V + L +Y + AR +FD + V W +++G +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSG- 201
Query: 324 GDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
EAL F M AG + PD T+ S++ + +G+ + GL + V
Sbjct: 202 ---SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
LI +Y+KCG + AR LF + +V++ +I+G ++NG +++LF +L+ + L
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318
Query: 443 RPNRVTFLAVLQACTHTGF 461
RP+ T +A++ H+ F
Sbjct: 319 RPSSSTLVALIP--VHSPF 335
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 29/224 (12%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN+ I + LF+QM+ ++ PN LT ACA+L L + +H
Sbjct: 387 TMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVH 446
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I +VKC + A IFD M ++V SWN M+ G+ G
Sbjct: 447 KIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGA 506
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSVHS-FGIHIGVDADVSV 178
L+L+ +M + T + + A H + ++ +S+ S +GI G++
Sbjct: 507 EALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEH---- 562
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVS---WNSMVAGC 219
C + + LK A F I E ++ V W +++ C
Sbjct: 563 CTCMVDLLGRAGQLKEA---FELISEFPKSAVGPGIWGALLGAC 603
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 323/631 (51%), Gaps = 64/631 (10%)
Query: 64 CAKLSDLIYSQMIHGHIVKS-----PFVKCD-----------RLDCAYKIFDEMAVRDVA 107
C L L + HGH++++ P+ L+ A K+FDE+ +
Sbjct: 40 CVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ---ADFVTVMGLTQAAIHAKHLSLLKSVH 164
+WN ++ +A + VL ++ + +V + T L +AA LSL +S+H
Sbjct: 97 AWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ V +DV V N+ I Y C DL A VF I+E+ VVSWNSM+ G
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK--DVVSWNSMINGFVQKGS 212
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
D +L ++ M + T+V +LS+ L GR V S+ ++++++ N
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA----------------------- 321
++ MY+KCG I+ A+ LFD + ++ V+WT M+ GYA
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 322 --------QKGDLDEALRLFFAMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYAC 372
Q G +EAL +F ++ + + +T++S +S C Q GALELG+W +Y
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
G++ N V +ALI MYSKCG + +RE+F ++ ++ V W+ MI G A++G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
+F+++ E +++PN VTF V AC+HTG +++ ++ + GI PE HY+C+ D
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV--PEEKHYACIVD 510
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
+LGR G L++A+ F+++MPI +WG LL ACKIH N+ + E L +LEP +
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 553 YVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELT 612
+V ++N YA G+W+ V+ +R M+ +KK PG S I+G F + D H SE
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Query: 613 Y----PVLDCLALHSREEAYSSHLKWIPEHE 639
Y V++ L + E S L+ I E E
Sbjct: 631 YGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 219/469 (46%), Gaps = 47/469 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ IR + + ++ F M ++ PN TFPF+ KA A++S L Q +HG
Sbjct: 98 WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VKS + C LD A K+F + +DV SWN+M+ GF Q G + L
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M ++A VT++G+ A ++L + V S+ V+ ++++ N + Y
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 187 AKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVA 217
KC ++ A+ +F +EE+ + +V+WN++++
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 218 GCTYGDKFDDSL-NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
K +++L F+ + +L+ T+VS LS+ AL GR +HS+ +G
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
++ V + LI MYSKCGD++ +R +F+ + R W+AMI G A G +EA+ +F+ M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 337 EAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
+ A P+ VT ++ C +G + E F + G+ ++D+ + G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 396 IGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ A + A+P S W ++ C ++ A +L+EL+ R
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 566
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 122/283 (43%), Gaps = 48/283 (16%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + WNS I V K K L LF++M+ D++ +++T + ACAK+ +L + +
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFD--------------------- 99
+ +I ++ + KC ++ A ++FD
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 100 ----------EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLT 148
M +D+ +WNA++ + Q G L +F+ ++L ++ + +T++
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
A L L + +HS+ G+ + V + I Y+KC DL+ + VF +E+ R
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK--RD 430
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
V W++M+ G +++++ + M + + T ++
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVF 473
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 212/644 (32%), Positives = 324/644 (50%), Gaps = 76/644 (11%)
Query: 7 PPRLNRIYRSSTINQ----WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
PP + +ST+N + S +R + + K +L++ QM+ + P+ +P + K
Sbjct: 49 PPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIK 108
Query: 63 ACAKLSDLIYSQMI---HG------HIVKSPFVKCDRLDCAYKIFDEMA--VRDVASWNA 111
+ ++ ++ HG + V + + + A K+FDE+ R VA WNA
Sbjct: 109 SAGTGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNA 168
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ G+ + LF M
Sbjct: 169 MVSGYWKWESEGQAQWLFDVMP-------------------------------------- 190
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+ +V ++ YAK DL+ A F + E R+VVSWN+M++G +++L
Sbjct: 191 -ERNVITWTAMVTGYAKVKDLEAARRYFDCMPE--RSVVSWNAMLSGYAQNGLAEEALRL 247
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPE------ALVQGRLVHSHGIHYGFDLDVSVINTL 285
+ M+ G D TT V+++S+ C A R +H I L+ V L
Sbjct: 248 FDEMVNAGIEPDETTWVTVISA--CSSRGDPCLAASLVRTLHQKRIQ----LNCFVRTAL 301
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PD 344
+ MY+K GD+DSAR LF+ + R V+W +MI+GYAQ G A+ LF M A +L PD
Sbjct: 302 LDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPD 361
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
VT++S+IS CG GALELG W + +K ++ NA+I MYS+CGS+ DA+ +F
Sbjct: 362 EVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQ 421
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ + VVS+ T+I+G A +G VEA++L + E + P+RVTF+ VL AC+H G LE+
Sbjct: 422 EMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEE 481
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G + D P +DHY+CM DLLGR G+L++A ++ MP++ AG++G+LL
Sbjct: 482 GRKVFESIKD-------PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLN 534
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
A +IH +E+GE A LF+LEP ++ ++ ++N YA GRW V IR MK+ VKK
Sbjct: 535 ASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKT 594
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S GK F DR H S+ Y +L L RE Y
Sbjct: 595 TGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGY 638
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 296/590 (50%), Gaps = 40/590 (6%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
P L P + + LS L ++ IH HI+K+ F L F + A WN
Sbjct: 38 PTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHA--LQIPLNDFPS-GLSPSAQWNF 94
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
++ + + N L ++ +R + + D + +A L K +H F + G
Sbjct: 95 VITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 154
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+D DV V N + Y +C ++ A LVF + ER VVSW++M+ + +FD +L
Sbjct: 155 LDRDVFVGNALMLMYGECACVEYARLVFDKMMER--DVVSWSTMIRSLSRNKEFDMALEL 212
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD--LDVSVINTLISMY 289
R M + R +VS+++ F + G+ +H++ I + + V L+ MY
Sbjct: 213 IREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 272
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISG------------------------------ 319
+KCG + AR LF+G+ +T VSWTAMI+G
Sbjct: 273 AKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLS 332
Query: 320 -YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
YAQ +D+A LF M +G P VT++S++S C +GAL+LGKW +Y ++
Sbjct: 333 AYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV 392
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ ++ AL+DMY+KCG I A LF + + W +I G A++G EALD+F ++
Sbjct: 393 DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME 452
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
++PN +TF+ +L AC+H G + +G + G+ P+++HY CM DLLGR G
Sbjct: 453 RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLV--PQIEHYGCMVDLLGRAG 510
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
L EA + ++SMPIK + +WG L+ AC++H N ++GE A L ++EP + V M+N
Sbjct: 511 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSN 570
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
YA RW A +R MK +KK PG S+ +NG F D+ H +
Sbjct: 571 IYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQ 620
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 211/457 (46%), Gaps = 59/457 (12%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
QWN I +N+ L ++ Q+++ D E +N P + KAC ++S + IHG +
Sbjct: 91 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+K + +C ++ A +FD+M RDV SW+ M+ ++ + L
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMAL 210
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI------HIGVDADVSVCN 180
L M + ++ V ++ + ++ + K++H++ I H+GV ++
Sbjct: 211 ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTAL-- 268
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF--------------- 225
+ YAKC L +A +F G+ + +TVVSW +M+AGC ++
Sbjct: 269 --LDMYAKCGHLGLARQLFNGLTQ--KTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV 324
Query: 226 ----------------DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
D + N + M +G R T+VSLLS AL G+ VHS+
Sbjct: 325 MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 384
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
++D + L+ MY+KCGDI++A LF R W A+I+G+A G +EA
Sbjct: 385 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 444
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALID 388
L +F ME G P+ +T + ++ C +G + G K F+ + GL + ++D
Sbjct: 445 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 504
Query: 389 MYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALN 424
+ + G + +A E+ ++P K + W ++A C L+
Sbjct: 505 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 541
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 275/515 (53%), Gaps = 4/515 (0%)
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS-VH 164
ASWNA L A+ + L L+ M G + T + + L L S +H
Sbjct: 21 TASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFT-FPFAFKSCASLSLPLAGSQLH 79
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
I G + + V + IS Y KC + A VF V +N+++AG + +
Sbjct: 80 GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
F D++ +R M G ++ T++ L+ P L G +H+ + +G D D+SV N
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L++MY +CG +D AR LFDG+ ++ ++W AMISGYAQ G L L+ ME G +PD
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPD 259
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
VT++ ++S C GA G+ + G N + NALI+MY++CG++ AR +F
Sbjct: 260 PVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFD 319
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ EK V+SWT +IAG ++G+ A+ LF +++ D P+ F++VL AC+H G EK
Sbjct: 320 GMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEK 379
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G D G+ PE HYSC+ DLLGR G+L+EA + SM ++ D +WG LL
Sbjct: 380 GLYYFTAMERDYGLQPGPE--HYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLG 437
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
ACKIH N+E+ E + + EP + YV ++N ++ G +G+ +R MM+ ++KK
Sbjct: 438 ACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKE 497
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
PG S G+ F A DR H +++ Y +LD L
Sbjct: 498 PGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGL 532
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 234/457 (51%), Gaps = 26/457 (5%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+T WN+++RE + + L L+ QM + PN TFPF K+CA LS + +
Sbjct: 19 NTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQL 78
Query: 77 HGHIVKS-----PFV---------KCDRLDCAYKIFDE-MAVRDVA-SWNAMLVGFAQMG 120
HGH++K+ PFV KC + A K+FDE R++A +NA++ G++
Sbjct: 79 HGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNS 138
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ + LF MR G+ + VT++GL HL S+H+ + G+D D+SV N
Sbjct: 139 RFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGN 198
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ Y +C + A +F G+ E + +++WN+M++G L+ YR M + G
Sbjct: 199 CLLTMYVRCGSVDFARKLFDGMPE--KGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGI 256
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D T+V +LSS A GR V GF + + N LI+MY++CG++ AR
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARA 316
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+FDG+ ++ +SWTA+I+GY G + A++LF M ++ ELPD +S++S C +G
Sbjct: 317 IFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGL 376
Query: 361 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTT 416
E G +F GL+ + ++D+ + G + +AR+L ++ P+ V W
Sbjct: 377 TEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAV--WGA 434
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
++ C ++ A F +++E + P + + +L
Sbjct: 435 LLGACKIHRNVELAELAFEKVIEFE--PTNIGYYVLL 469
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 280/531 (52%), Gaps = 35/531 (6%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
SPF L A +F+ + + WN M+ G + + + M L G++ +
Sbjct: 77 SPF---GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSY 133
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T L ++ K +H + +G+++D V + I+ YA+ +L AELVF
Sbjct: 134 TFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKS 193
Query: 203 EER-----------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
R +R VSWN+M+AG +F+++L F++
Sbjct: 194 SLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQ 253
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M + +T+V++LS+ +L G V S +G ++ ++N LI MYSKCG
Sbjct: 254 EMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCG 313
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
D+D AR LF+GIC++ +SW MI GY+ EAL LF M+ + P+ VT +S++
Sbjct: 314 DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILP 373
Query: 354 GCGQSGALELGKWFDNYACSGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
C GAL+LGKW Y L N + +LIDMY+KCG+I A+++F + K +
Sbjct: 374 ACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SW MI+G A++G AL+LF Q+ + P+ +TF+ VL AC+H G +E G
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSM 493
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
+D IS P+L HY CM DLLGR G EA +++M +K D IWG+LL AC++H N+
Sbjct: 494 VEDYDIS--PKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNV 551
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
E+GE+ A LF+LEP + YV ++N YA GRWD VA IRT + +KK
Sbjct: 552 ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 200/409 (48%), Gaps = 40/409 (9%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWIS--SYAKCDDLKMAELVFCGIEERLRTVVSW 212
K LK +HS I G+ + I + + +L A L+F IE+ + + W
Sbjct: 43 KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFI--W 100
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N+M+ G + +++FY M+ G + T LL S A +G+ +H H +
Sbjct: 101 NTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLK 160
Query: 273 YGFDLDVSVINTLISMYSKCGDI-------------------------------DSARVL 301
G + D V +LI+MY++ G++ D AR L
Sbjct: 161 LGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRL 220
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ I R VSW AMI+GYAQ G +EAL F M+ A P+ T+++++S C QSG+L
Sbjct: 221 FEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSL 280
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
ELG W ++ GL N+ + NALIDMYSKCG + AR+LF + EK ++SW MI G
Sbjct: 281 ELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGY 340
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISY 480
+ + EAL LF ++ + ++ PN VTF+++L AC + G L+ G W I Y DK
Sbjct: 341 SHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW---IHAYIDKKFLG 397
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ + D+ + G ++ A M KS G W ++ +H
Sbjct: 398 LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS-LGSWNAMISGLAMH 445
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 181/422 (42%), Gaps = 50/422 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI----- 76
WN+ I + L F++MK+ ++ PN T + ACA+ L +
Sbjct: 232 WNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIE 291
Query: 77 -HG--------HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
HG + + + KC LD A +F+ + +D+ SWN M+ G++ M + L
Sbjct: 292 DHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALA 351
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF--GIHIGVDADVSVCNTWISS 185
LF M+ ++ + VT + + A + L L K +H++ +G+ + S+ + I
Sbjct: 352 LFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL-TNTSLWTSLIDM 410
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC +++ A+ VF G++ +++ SWN+M++G + +L +R M GF D
Sbjct: 411 YAKCGNIEAAKQVFAGMKP--KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 246 TVVSLLSSFVCPEA-LVQ-GRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T V +LS+ C A LV+ GR S + Y + +I + + G D A L
Sbjct: 469 TFVGVLSA--CSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALM 526
Query: 303 DGICDRTRVS-WTAMISGYAQKGDLDE---ALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ + + W +++ G+++ A + F +E E P +LS I
Sbjct: 527 KNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEP--ENPGAYVLLSNIYATA-- 582
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMY-----------SKCGSIGDARELFYALP 407
G+W D L D M D+Y + G + D E+ Y +
Sbjct: 583 -----GRWDDVARIRTKLNDKGM--KKXQDIYKMLDEIDQSFGERPGXVPDTSEVLYDMD 635
Query: 408 EK 409
E+
Sbjct: 636 EE 637
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN I + N + L LFR+M+Q+++EPN++TF I ACA L L + IH
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 79 HIVKS---------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+I K + KC ++ A ++F M + + SWNAM+ G A G
Sbjct: 390 YIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHAN 449
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L LF MR G + D +T +G+ A HA
Sbjct: 450 MALELFRQMRDEGFEPDDITFVGVLSACSHA 480
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 199/631 (31%), Positives = 316/631 (50%), Gaps = 19/631 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN +R V + + F +M+ + N++T+ I CA + +HG ++
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F KC L A K+F+ M D +WN ++ G+ Q GF +
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G++ D VT + + + L K VHS+ + V DV + + I Y
Sbjct: 301 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYF 360
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D++MA +F + L V +M++G D++N +R ++ G + T+
Sbjct: 361 KGGDVEMARKIF--QQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTM 418
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + AL G+ +H H + + V+V + + MY+KCG +D A F + D
Sbjct: 419 ASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSD 478
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V W +MIS ++Q G + A+ LF M +G D V++ S +S AL GK
Sbjct: 479 RDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEM 538
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y + V + LIDMYSKCG++ A +F + K VSW ++IA +G
Sbjct: 539 HGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCP 598
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E LDL+H+++ + P+ VTFL ++ AC H G +++G + GI ++HY
Sbjct: 599 RECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIG--ARMEHY 656
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DL GR G++ EA D ++SMP DAG+WGTLL AC++H N+E+ + + L +L+P
Sbjct: 657 ACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDP 716
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV ++N +A G W V +R++MK V+K PG S +NG T F+A D H
Sbjct: 717 KNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHP 776
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
ES Y +L L L R++ Y ++P H
Sbjct: 777 ESVEIYLILKSLLLELRKQGYVPQ-PYLPLH 806
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 200/430 (46%), Gaps = 16/430 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WN IR LL + +M +++ P+ TFP++ KAC L+++ ++H
Sbjct: 80 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTAR 139
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + + + A ++FDE+ +RD WN ML G+ + G +N +
Sbjct: 140 SLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIG 199
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F MR + VT + + +H I G + D V NT ++ Y+
Sbjct: 200 TFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYS 259
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +L A +F + + V+WN ++AG D++ + M+ G + D T
Sbjct: 260 KCGNLLYARKLFNTMPQ--TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 317
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L S + +L + VHS+ + + DV + + LI +Y K GD++ AR +F
Sbjct: 318 ASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNIL 377
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
TAMISGY G +A+ F + G + + +T+ S++ C AL+ GK
Sbjct: 378 VDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKEL 437
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ L++ V V +A+ DMY+KCG + A E F + ++ V W +MI+ + NG+
Sbjct: 438 HCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKP 497
Query: 428 VEALDLFHQL 437
A+DLF Q+
Sbjct: 498 EIAIDLFRQM 507
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 210/441 (47%), Gaps = 10/441 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+V C R A +F E+ +R WN M+ G +G+ + L ++ M + D T
Sbjct: 56 YVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTF 115
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A ++ L VH +G D+ + I YA ++ A VF E
Sbjct: 116 PYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVF--DEL 173
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
LR + WN M+ G FD+++ + M + ++ T +LS G
Sbjct: 174 PLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGT 233
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H I GF+ D V NTL++MYSKCG++ AR LF+ + V+W +I+GY Q G
Sbjct: 234 QLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNG 293
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
DEA LF AM +AG PD VT S + +SG+L K +Y + +V + +
Sbjct: 294 FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKS 353
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALID+Y K G + AR++F V T MI+G L+G ++A++ F L++ +
Sbjct: 354 ALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVT 413
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
N +T +VL AC L+ G + I++ + I ++ S + D+ + G+L
Sbjct: 414 NSLTMASVLPACAAVAALKPGKELHCHILKKRLENI-----VNVGSAITDMYAKCGRLDL 468
Query: 503 ALDFVQSMPIKSDAGIWGTLL 523
A +F + M + D+ W +++
Sbjct: 469 AYEFFRRMSDR-DSVCWNSMI 488
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 145/317 (45%), Gaps = 2/317 (0%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L +A A + + VH+ I G+ + + + Y C + A +F E L
Sbjct: 17 LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLF--FELEL 74
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R + WN M+ G FD +L FY M+ + D T ++ + + +V
Sbjct: 75 RYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVV 134
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H GF +D+ + LI +Y+ G I AR +FD + R + W M+ GY + GD
Sbjct: 135 HDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDF 194
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
D A+ F M + + + VT ++S C G G G + + V N L
Sbjct: 195 DNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTL 254
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ MYSKCG++ AR+LF +P+ V+W +IAG NG EA LF+ ++ ++P+
Sbjct: 255 VAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDS 314
Query: 447 VTFLAVLQACTHTGFLE 463
VTF + L + +G L
Sbjct: 315 VTFASFLPSILESGSLR 331
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
Q R VH+ I G + + ++ +Y CG A LF + R + W MI G
Sbjct: 29 QARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLY 88
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
G D AL +F M + PD T +I CG + L + A S G ++
Sbjct: 89 MLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLF 148
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ALI +Y+ G I DAR +F LP + + W M+ G +G+F A+ F ++
Sbjct: 149 AGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSY 208
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
N VT+ +L C G G + + G ++P++ + + + + G L
Sbjct: 209 SMVNSVTYTCILSICATRGNFCAGTQLHGLVI-GSGFEFDPQVA--NTLVAMYSKCGNLL 265
Query: 502 EALDFVQSMPIKSDAGIWGTLL 523
A +MP ++D W L+
Sbjct: 266 YARKLFNTMP-QTDTVTWNGLI 286
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 319/654 (48%), Gaps = 35/654 (5%)
Query: 4 SSLPPRLN--RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA 61
SSLP + Y+ S+IN E + E H+ L ++ K+ IEP+ P +
Sbjct: 26 SSLPTEKSPSTSYQRSSINTQLDGSLEPIKPLEFHEALCFIKEEKK--IEPS-YYLPLL- 81
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
+ C K + + +Q+IH HI+K+ + KC + A KIFD + R+V
Sbjct: 82 QECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVV 141
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+W A++ G+ Q + +F +M G T+ A + L K +H+F
Sbjct: 142 AWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFV 201
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
I +D D S+ N S Y+K L + VF I E+ V+SW ++++ C K
Sbjct: 202 IKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEK--NVISWTAVISACGENGKAAM 259
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
L F+ M+ + + T+ ++LS ALV GRLVHS I G+ ++ + N+++
Sbjct: 260 GLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMY 319
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD-----------EALRLFFAM 336
+Y KCG +D A++LF + V+W AMISG+AQ DL EAL +F +
Sbjct: 320 LYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLEL 379
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G+ PDL T+ S+++ C + AL G+ G +V+V AL++MYSKCGSI
Sbjct: 380 NRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSI 439
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
G A + F + + ++SWTTMI G A +G +AL LF + +RPN++TF+ VL AC
Sbjct: 440 GKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAAC 499
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
H+G +++ A+ + K P +DHY C+ + + +L EA D + M +
Sbjct: 500 CHSGMVDE--ALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSE 557
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
IW L+ C+ E+G Y A L KL+ YV + N Y RW V+ +R +M
Sbjct: 558 FIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVSRVRKLM 617
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
K ++ KF S I K +F R H + Y +L+ L ++ Y S
Sbjct: 618 KEEKLGKFNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEELLDKAKGSGYQS 671
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/614 (30%), Positives = 304/614 (49%), Gaps = 18/614 (2%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + V ++ + +F +M + I+P F + AC ++ + +H +
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 228
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ +VK R+D A IF++M DV SWNA++ G G +
Sbjct: 229 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M+ G+ + + + +A A L + +H F I D+D + + Y
Sbjct: 289 ELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK L A VF + R ++ WN++++GC++G + D++ + + + G ++ TT
Sbjct: 349 AKNHFLDDAMKVFDWMSHR--DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTT 406
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++L S EA R VH+ GF D V+N LI Y KC + A +F+
Sbjct: 407 LAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 466
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ T+MI+ +Q + A++LF M G PD + S+++ C A E GK
Sbjct: 467 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ + NAL+ Y+KCGSI DA F +LPE+ VVSW+ MI G A +G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL+LF ++++ + PN +T +VL AC H G +++ + GI E H
Sbjct: 587 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE--H 644
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DLLGR GKL +A++ V SMP +++A +WG LL A ++H + E+G+ A LF LE
Sbjct: 645 YSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILE 704
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + +V +AN YA G W+ VA +R +MK + +KK P S + K TF D+ H
Sbjct: 705 PEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSH 764
Query: 607 AESELTYPVLDCLA 620
++ Y LD L
Sbjct: 765 PMTKEIYSKLDELG 778
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 189/406 (46%), Gaps = 17/406 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN+ I V H+ + L QMK + + PN I KACA + I
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 325
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG ++K+ + K LD A K+FD M+ RD+ WNA++ G + G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 385
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ +FY +R G+ + T+ + ++ + S + VH+ IG D V N
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I SY KC L A VF E +++ SM+ + D + ++ + M+ G
Sbjct: 446 IDSYWKCSCLSDAIRVF--EECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + SLL++ A QG+ VH+H I F D N L+ Y+KCG I+ A + F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL- 361
+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++ C +G +
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
E ++F++ G+ + +ID+ + G + DA EL ++P
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 669
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 213/449 (47%), Gaps = 33/449 (7%)
Query: 70 LIYSQMIHGHIVKSPFV------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
L+ +H +++KS F+ KC R CA ++FDE+ SW++++ ++
Sbjct: 20 LLPGAHLHANLLKSGFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYS 79
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
G + ++ F+ MR G+ + + + + A+ L VH+ + G +DV
Sbjct: 80 NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ---LGAQVHAMAMATGFGSDVF 136
Query: 178 VCNTWISSYAKCDDLKMAELVF--CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V N ++ Y + A VF G E R VSWN +++ D+ D++ + M
Sbjct: 137 VANALVAMYGGFGFMDDARRVFDEAGSE---RNAVSWNGLMSAYVKNDQCGDAIQVFGEM 193
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+++G + ++++ + GR VH+ + G++ DV N L+ MY K G +
Sbjct: 194 VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 253
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
D A V+F+ + D VSW A+ISG G A+ L M+++G +P++ + S++ C
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 313
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+GA +LG+ + + + L+DMY+K + DA ++F + + ++ W
Sbjct: 314 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 373
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+I+GC+ G EA +F+ L + L NR T AVL++ T LE A +
Sbjct: 374 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS---TASLEAASATRQVHALA 430
Query: 476 KGISY-------NPELDHY---SCMADLL 494
+ I + N +D Y SC++D +
Sbjct: 431 EKIGFIFDAHVVNGLIDSYWKCSCLSDAI 459
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 190/457 (41%), Gaps = 14/457 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC--AKLSDLIYSQMIHG 78
W+S + N + F M+ + N P + K A+L +++ +
Sbjct: 70 SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMAT 129
Query: 79 HIVKSPFVK---------CDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQMGFLENVLRL 128
FV +D A ++FDE R+ SWN ++ + + + +++
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M GIQ + A ++++ + VH+ + +G + DV N + Y K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK 249
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
+ +A ++F + + VVSWN++++GC ++ M +G +V +
Sbjct: 250 MGRVDIASVIFEKMPD--SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLS 307
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L + A GR +H I D D + L+ MY+K +D A +FD + R
Sbjct: 308 SILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR 367
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+ W A+ISG + G DEA +F+ + G + T+ +++ A +
Sbjct: 368 DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVH 427
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
A G + V N LID Y KC + DA +F +++ T+MI +
Sbjct: 428 ALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGE 487
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
A+ LF +++ L P+ ++L AC E+G
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 178/400 (44%), Gaps = 26/400 (6%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
MR G + +T QA + HL +LLKS G A S+ N IS Y+KC
Sbjct: 1 MRSAGTISQQLTRYAAAQALLPGAHLHANLLKS--------GFLA--SLRNHLISFYSKC 50
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
A VF I + VSW+S+V + ++ + M G + +
Sbjct: 51 RRPCCARRVFDEIPDPCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD-GICDR 308
+L P+A + G VH+ + GF DV V N L++MY G +D AR +FD +R
Sbjct: 109 VLK--CVPDAQL-GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSER 165
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
VSW ++S Y + +A+++F M +G P +++ C S ++ G+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 225
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
G + +V NAL+DMY K G + A +F +P+ VVSW +I+GC LNG
Sbjct: 226 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY- 487
A++L Q+ L PN ++L+AC G + G I I N + D Y
Sbjct: 286 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM-----IKANADSDDYI 340
Query: 488 -SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ D+ + L +A+ M + D +W L+ C
Sbjct: 341 GVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGC 379
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/616 (30%), Positives = 311/616 (50%), Gaps = 29/616 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------------- 86
F +M + I P+ + I ++C L L +M+H IV F
Sbjct: 208 FFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYA 267
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
K ++ +Y +F+ M + SWNAM+ G G LF M+ + T++
Sbjct: 268 KLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVS 327
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF------C 200
+++A +++ K V + +G++ +V V I Y+KC L A VF C
Sbjct: 328 VSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINC 387
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
G+ WN+M++G + ++L Y M NG D+ T S+ ++ ++L
Sbjct: 388 GVN------TPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSL 441
Query: 261 VQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
GR+VH + G DL VSV N + YSKCG ++ R +FD + +R VSWT +++
Sbjct: 442 QFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTA 501
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y+Q +EAL F M G P+ T S++ C LE G+ C GL
Sbjct: 502 YSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTE 561
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ +ALIDMY+KCGSI +A ++F + +VSWT +I+G A +G +AL LF ++
Sbjct: 562 KCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMEL 621
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
++ N VT L VL AC+H G +E+G + Q + G PE++HY+C+ DLLGR G+
Sbjct: 622 SGIKANAVTLLCVLFACSHGGMVEEG--LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGR 679
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L +A++F++ MP++ + +W TLL C++H N+E+GE A + + P +A YV ++N
Sbjct: 680 LDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNT 739
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
Y G ++ ++R +MK VKK PG S + G+ F + D+ H + + Y L+ L
Sbjct: 740 YIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEEL 799
Query: 620 ALHSREEAYSSHLKWI 635
+ Y L+++
Sbjct: 800 REKIKAMGYVPDLRYV 815
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 215/467 (46%), Gaps = 32/467 (6%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPF----------------VKCDRLDCAYKIFDEMAV 103
+ + CA+ + ++ +HG ++KS F KC A +FDEM
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
R+V SW M+VG + G + + F M GI D + Q+ I L L K V
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H+ + G + V + ++ YAK ++ + VF + E + VSWN+M++GCT
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQ--VSWNAMISGCTSNG 301
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
++ + + M ++ T+VS+ + + G+ V + G + +V V
Sbjct: 302 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 361
Query: 284 TLISMYSKCGDIDSARVLFDG--ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
LI MYSKCG + AR +FD I W AMISGY+Q G EAL L+ M G
Sbjct: 362 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 421
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDAR 400
DL T S+ + S +L+ G+ GL V+ V NA+ D YSKCG + D R
Sbjct: 422 TSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVR 481
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++F + E+ +VSWTT++ + + EAL F + E PN+ TF +VL +C
Sbjct: 482 KVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLC 541
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSC----MADLLGRKGKLKEA 503
FLE G + G+ LD C + D+ + G + EA
Sbjct: 542 FLEYGRQV-------HGLLCKAGLDTEKCIESALIDMYAKCGSITEA 581
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 225/481 (46%), Gaps = 25/481 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
WN+ I + + LF +MK PN T ++KA KL D+
Sbjct: 290 WNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCAS 349
Query: 71 ---IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVAS--WNAMLVGFAQMGFLENV 125
I ++ G + + KC L A +FD + + WNAM+ G++Q G +
Sbjct: 350 ELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEA 409
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 184
L L+ M GI +D T + A +K L + VH + G+D VSV N
Sbjct: 410 LELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIAD 469
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+Y+KC L+ VF +EE R +VSW ++V + +++L + M GF +
Sbjct: 470 AYSKCGFLEDVRKVFDRMEE--RDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQ 527
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T S+L S L GR VH G D + + + LI MY+KCG I A +FD
Sbjct: 528 FTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDK 587
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I + VSWTA+ISGYAQ G +++AL+LF ME +G + VT+L ++ C G +E G
Sbjct: 588 ISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEG 647
Query: 365 KWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCA 422
++ G G+ + +ID+ + G + DA E +P E + W T++ GC
Sbjct: 648 LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCR 707
Query: 423 LNGEFVEALDLFHQLMELDLRPN-RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
++G VE ++ + + L +RP T++ + TG E G ++ + D+G+
Sbjct: 708 VHGN-VELGEIAARKI-LSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVM-KDQGVKKE 764
Query: 482 P 482
P
Sbjct: 765 P 765
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W + + + + L F M++ PN TF + +CA L L Y + +HG
Sbjct: 492 IVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHG 551
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ K+ + KC + A K+FD+++ D+ SW A++ G+AQ G +E+
Sbjct: 552 LLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVED 611
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+LF M L GI+A+ VT++ + A H
Sbjct: 612 ALQLFRRMELSGIKANAVTLLCVLFACSHG 641
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGD 398
++ DL+ VL C + G++ K KD +++ N +YSKC
Sbjct: 117 QVQDLIDVLR---DCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRA 173
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F +P++ V SWT MI G +G F + F +++ + P++ + A++Q+C
Sbjct: 174 ACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIG 233
Query: 459 TGFLEKG 465
LE G
Sbjct: 234 LDSLELG 240
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 213/684 (31%), Positives = 329/684 (48%), Gaps = 79/684 (11%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L R+ S + WN IRE + + + + +M + ++ T P + KAC +L
Sbjct: 74 LERVTPSPAV-WWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPS 132
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVR---DVASWNAM 112
HG I + F +C L+ A IFDE+ R DV SWN++
Sbjct: 133 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 192
Query: 113 LVGFAQMGFLENVLRLFYNMRLV------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+ + L LF M L+ ++D ++++ + A K + K VH
Sbjct: 193 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 252
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I G DV V N I +YAKC ++ A VF +E + VVSWN+MVAG + F
Sbjct: 253 AIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME--FKDVVSWNAMVAGYSQSGNFK 310
Query: 227 -----------------------------------DSLNFYRHMMYNGFRLDVTTVVSLL 251
++LN +R M+++G + T++S+L
Sbjct: 311 AAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVL 370
Query: 252 SSFVCPEALVQGRLVHSHGIHY----------GFDLDVSVINTLISMYSKCGDIDSARVL 301
S+ A QG +H++ + G D D+ V N LI MYSKC +AR +
Sbjct: 371 SACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI 430
Query: 302 FDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQ 357
FD I +R V+WT MI G+AQ GD ++AL+LF M E G P+ T+ ++ C
Sbjct: 431 FDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAH 490
Query: 358 SGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
A+ +GK Y D+ V N LI+MYSKCG + AR +F ++ +K +SWT
Sbjct: 491 LAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWT 550
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+M+ G ++G EALD+F ++ + P+ +TFL VL AC+H G +++G + D
Sbjct: 551 SMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSAD 610
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
G++ P +HY+ DLL R G+L +A V+ MP++ A +W LL AC++H N+E+
Sbjct: 611 YGLT--PRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELA 668
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E+ L ++ + Y ++N YA GRW VA IR +MK++ +KK PG S
Sbjct: 669 EHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKG 728
Query: 596 TCTFTAEDRYHAESELTYPVLDCL 619
T +F DR H S Y +L+ L
Sbjct: 729 TASFFVGDRSHPLSPQIYALLESL 752
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 230/513 (44%), Gaps = 68/513 (13%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G V + ++ C D A + + + WN ++ + G L++ + + M G
Sbjct: 54 GTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGT 113
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ D T+ + +A + H G +++V +CN ++ Y++C L+ A +
Sbjct: 114 RLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 173
Query: 198 VFCGIEER-LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY------NGFRLDVTTVVSL 250
+F I +R + V+SWNS+V+ +L+ + M R D+ ++V++
Sbjct: 174 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 233
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L + +A+ Q + VH + I G LDV V N LI Y+KCG +++A +F+ + +
Sbjct: 234 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 293
Query: 311 VSWTAMISGYAQKGDLD-----------------------------------EALRLFFA 335
VSW AM++GY+Q G+ EAL +F
Sbjct: 294 VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQ 353
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS----------GGLKDNVMVCNA 385
M +G LP+ VT++S++S C GA G Y+ GG +++MV NA
Sbjct: 354 MIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 413
Query: 386 LIDMYSKCGSIGDARELFYALP--EKIVVSWTTMIAGCALNGEFVEALDLFHQLME--LD 441
LIDMYSKC S AR +F +P E+ VV+WT MI G A G+ +AL LF +++
Sbjct: 414 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 473
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISII-----QYDDKGISYNPELDHYSCMADLLGR 496
+ PN T +L AC H + G I QYD +C+ ++ +
Sbjct: 474 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA------NCLINMYSK 527
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G + A SM KS A W +++ +H
Sbjct: 528 CGDVDTARHVFDSMSQKS-AISWTSMMTGYGMH 559
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 304/610 (49%), Gaps = 18/610 (2%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + V ++ + +F +M + I+P F + AC ++ + +H +
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMV 228
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ ++K R+D A IF++M DV SWNA++ G G +
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M+ G+ + T+ + +A A L + +H F I D+D + + Y
Sbjct: 289 ELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK L A VF + R ++ N++++GC++G + D++L+ + + G ++ TT
Sbjct: 349 AKNHFLDDARKVFDWMFHR--DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++L S EA R VH+ + GF D V+N LI Y KC + A +F+
Sbjct: 407 LAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECS 466
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ T+MI+ +Q + A++LF M G PD + S+++ C A E GK
Sbjct: 467 SGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ + NAL+ Y+KCGSI DA F +LPE+ VVSW+ MI G A +G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL+LF ++++ + PN +T +VL AC H G +++ + GI E H
Sbjct: 587 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE--H 644
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DLLGR GKL +A++ V SMP +++A IWG LL A ++H + E+G+ A LF LE
Sbjct: 645 YSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILE 704
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + +V +AN YA G W+ VA +R +MK + +KK P S + K TF D+ H
Sbjct: 705 PEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSH 764
Query: 607 AESELTYPVL 616
++ Y L
Sbjct: 765 PMTKEIYAKL 774
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 190/406 (46%), Gaps = 17/406 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN+ I V H+ + L QMK + + PN T I KAC+ + I
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG ++K+ + K LD A K+FD M RD+ NA++ G + G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L LFY +R G+ + T+ + ++ + S + VH+ + IG D V N
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I SY KC L A VF E +++ SM+ + D + ++ + M+ G
Sbjct: 446 IDSYWKCSCLSDANRVF--EECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + SLL++ A QG+ VH+H I F D N L+ Y+KCG I+ A + F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL- 361
+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++ C +G +
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
E ++F++ G+ + +ID+ + G + DA EL ++P
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 669
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 187/373 (50%), Gaps = 4/373 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + KC R CA ++FDE+ SW++++ ++ G + ++ F+ MR G+ +
Sbjct: 45 SFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF 104
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ + + A+ L VH+ + G +DV V N ++ Y + A VF
Sbjct: 105 ALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEA 161
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+ R VSWN +++ D+ D++ + M+++G + ++++ +
Sbjct: 162 DSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR VH+ + G+D DV N L+ MY K G +D A V+F+ + D VSW A+ISG
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G A+ L M+ +G +P++ T+ S++ C +GA +LG+ + + +
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
L+DMY+K + DAR++F + + ++ +I+GC+ G EAL LF++L + L
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400
Query: 443 RPNRVTFLAVLQA 455
NR T AVL++
Sbjct: 401 GVNRTTLAAVLKS 413
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 194/457 (42%), Gaps = 14/457 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC--AKLSDLIYSQMIHG 78
W+S + N + F M+ + N P + K A+L +++ +
Sbjct: 70 SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMAT 129
Query: 79 HIVKSPFVK---------CDRLDCAYKIFDEM-AVRDVASWNAMLVGFAQMGFLENVLRL 128
FV +D A ++F+E + R+ SWN ++ + + + +++
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M GIQ + A ++++ + VH+ + +G D DV N + Y K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
+ +A ++F + + VVSWN++++GC ++ M Y+G +V T+
Sbjct: 250 MGRVDIASVIFEKMPD--SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L + A GR +H I D D + L+ MY+K +D AR +FD + R
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+ A+ISG + G DEAL LF+ + G + T+ +++ A +
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVH 427
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
A G + V N LID Y KC + DA +F +++ T+MI +
Sbjct: 428 ALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
A+ LF +++ L P+ ++L AC E+G
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 156/340 (45%), Gaps = 18/340 (5%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
MR G + +T QA + HL SLLKS + S N IS Y+KC
Sbjct: 1 MRSAGTISQQLTRYAAAQALLPGAHLHASLLKS----------GSLASFRNHLISFYSKC 50
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
A VF I + VSW+S+V + ++ + M G + +
Sbjct: 51 RRPCCARRVFDEIPDPCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF-DGICDR 308
+L P+A + G VH+ + GF DV V N L++MY G +D AR +F + +R
Sbjct: 109 VLK--CVPDARL-GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
VSW ++S Y + +A+++F M +G P +++ C S +E G+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
G +V NAL+DMY K G + A +F +P+ VVSW +I+GC LNG
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A++L Q+ L PN T ++L+AC+ G + G I
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 303/614 (49%), Gaps = 22/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I L LF +M + P+ AC+ L L + IHG+
Sbjct: 189 WNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAY 248
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + KC RL A K+FD M R++ SW M+ G+ Q F +
Sbjct: 249 RSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAIT 308
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F+NM G Q D + + + + +H+ I ++AD V N I YA
Sbjct: 309 MFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYA 368
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC+ L A VF + E +S+N+M+ G + +++N ++ M + R + T
Sbjct: 369 KCEHLTEARAVFDALAED--DAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTF 426
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VSLL A+ + +H I G LD+ + LI +YSKC ++ A+ +F+ +
Sbjct: 427 VSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHY 486
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W +MI G+AQ +EA++LF + +G P+ T +++++ ++ G+ F
Sbjct: 487 KDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQF 546
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G+ ++ V NALIDMY+KCG I + R LF + + V+ W +MI A +G
Sbjct: 547 HAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHA 606
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELD 485
EAL +F + E ++ PN VTF+ VL AC H GF+ +G + ++ +Y+ P ++
Sbjct: 607 EEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEG----LNHFNSMKSNYDIEPGIE 662
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+ + +L GR GKL A +F++ MPIK A +W +LL AC + N EIG Y A
Sbjct: 663 HYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLA 722
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + PYV ++N YA G W V N+R M + K G S + + TF R
Sbjct: 723 DPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGRE 782
Query: 606 HAESELTYPVLDCL 619
H E+EL Y VLD L
Sbjct: 783 HPEAELIYSVLDEL 796
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 239/532 (44%), Gaps = 31/532 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W S I + LF ++ E PN + +AC + + + +HG
Sbjct: 87 WGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIA 146
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + + K +D A +F + VR +WN ++ G+AQ+G L
Sbjct: 147 VKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVAL 206
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M + G++ D + A L + +H + + D SV N I Y
Sbjct: 207 ELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLY 266
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC L A +F +E R +VSW +M++G +++ + +M G++ D
Sbjct: 267 CKCSRLSAARKLFDCME--YRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFA 324
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+L+S A+ QGR +H+H I + D V N LI MY+KC + AR +FD +
Sbjct: 325 CTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALA 384
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +S+ AMI GY++ DL EA+ +F M P L+T +S++ A+EL K
Sbjct: 385 EDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQ 444
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G ++ +ALID+YSKC + DA+ +F L K +V W +MI G A N +
Sbjct: 445 IHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQ 504
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-----WAISIIQYDDKGISYN 481
EA+ LF+QL+ + PN TF+A++ + + G W I G+ +
Sbjct: 505 GEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIK------AGVDND 558
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
P + + + D+ + G +KE +S D W +++ H + E
Sbjct: 559 PHVS--NALIDMYAKCGFIKEGRMLFEST-CGEDVICWNSMITTYAQHGHAE 607
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 200/395 (50%), Gaps = 10/395 (2%)
Query: 61 AKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
A +L DL + ++ + RL A +FD M R++ SW +++ + Q G
Sbjct: 44 ATVAGRLDDLFLTNLL-----LRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHG 98
Query: 121 FLENVLRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
+ + LF + + +F+ + + +A +K +SL + VH + + +DA+V V
Sbjct: 99 RDDCAISLFVAFQKASCEVPNEFL-LASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYV 157
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
I+ YAK + A LVF + +RT V+WN+++ G +L + M
Sbjct: 158 GTALINLYAKLGCMDEAMLVFHALP--VRTPVTWNTVITGYAQIGCGGVALELFDRMGIE 215
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G R D + S +S+ L GR +H + + D SVIN LI +Y KC + +A
Sbjct: 216 GVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAA 275
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R LFD + R VSWT MISGY Q EA+ +F+ M AG PD S+++ CG
Sbjct: 276 RKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSL 335
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
A+ G+ + L+ + V NALIDMY+KC + +AR +F AL E +S+ MI
Sbjct: 336 AAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMI 395
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + N + EA+++F ++ LRP+ +TF+++L
Sbjct: 396 EGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL 430
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 111/204 (54%), Gaps = 1/204 (0%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+ G D+ + N L+ YS G + AR LFD + R VSW ++IS Y Q G
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99
Query: 326 LDEALRLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
D A+ LF A + A E+P+ + S++ C QS A+ LG+ A L NV V
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALI++Y+K G + +A +F+ALP + V+W T+I G A G AL+LF ++ +RP
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI 468
+R + + AC+ GFLE G I
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQI 243
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 304/610 (49%), Gaps = 18/610 (2%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + V ++ + +F +M + I+P F + AC ++ + +H +
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMV 228
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ ++K R+D A IF++M DV SWNA++ G G +
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M+ G+ + T+ + +A A L + +H F I D+D + + Y
Sbjct: 289 ELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK L A VF + R ++ N++++GC++G + D++L+ + + G ++ TT
Sbjct: 349 AKNHFLDDARKVFDWMFHR--DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++L S EA R VH+ + GF D V+N LI Y KC + A +F+
Sbjct: 407 LAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECS 466
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ T+MI+ +Q + A++LF M G PD + S+++ C A E GK
Sbjct: 467 SGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ + NAL+ Y+KCGSI DA F +LPE+ VVSW+ MI G A +G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL+LF ++++ + PN +T +VL AC H G +++ + GI E H
Sbjct: 587 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE--H 644
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DLLGR GKL +A++ V SMP +++A IWG LL A ++H + E+G+ A LF LE
Sbjct: 645 YSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILE 704
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + +V +AN YA G W+ VA +R +MK + +KK P S + K TF D+ H
Sbjct: 705 PEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSH 764
Query: 607 AESELTYPVL 616
++ Y L
Sbjct: 765 PMTKEIYAKL 774
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 190/406 (46%), Gaps = 17/406 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN+ I V H+ + L QMK + + PN T I KAC+ + I
Sbjct: 266 SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG ++K+ + K LD A K+FD M RD+ NA++ G + G
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRH 385
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L LFY +R G+ + T+ + ++ + S + VH+ + IG D V N
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I SY KC L A VF E +++ SM+ + D + ++ + M+ G
Sbjct: 446 IDSYWKCSCLSDANRVF--EECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + SLL++ A QG+ VH+H I F D N L+ Y+KCG I+ A + F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL- 361
+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++ C +G +
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
E ++F++ G+ + +ID+ + G + DA EL ++P
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 669
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 186/373 (49%), Gaps = 4/373 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + KC R CA + FDE+ SW++++ ++ G + ++ F+ MR G+ +
Sbjct: 45 SFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF 104
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ + + A+ L VH+ + G +DV V N ++ Y + A VF
Sbjct: 105 ALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEA 161
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+ R VSWN +++ D+ D++ + M+++G + ++++ +
Sbjct: 162 DSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR VH+ + G+D DV N L+ MY K G +D A V+F+ + D VSW A+ISG
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G A+ L M+ +G +P++ T+ S++ C +GA +LG+ + + +
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
L+DMY+K + DAR++F + + ++ +I+GC+ G EAL LF++L + L
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400
Query: 443 RPNRVTFLAVLQA 455
NR T AVL++
Sbjct: 401 GVNRTTLAAVLKS 413
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 194/457 (42%), Gaps = 14/457 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC--AKLSDLIYSQMIHG 78
W+S + N + F M+ + N P + K A+L +++ +
Sbjct: 70 SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMAT 129
Query: 79 HIVKSPFVK---------CDRLDCAYKIFDEM-AVRDVASWNAMLVGFAQMGFLENVLRL 128
FV +D A ++F+E + R+ SWN ++ + + + +++
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M GIQ + A ++++ + VH+ + +G D DV N + Y K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
+ +A ++F + + VVSWN++++GC ++ M Y+G +V T+
Sbjct: 250 MGRVDIASVIFEKMPD--SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L + A GR +H I D D + L+ MY+K +D AR +FD + R
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+ A+ISG + G DEAL LF+ + G + T+ +++ A +
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVH 427
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
A G + V N LID Y KC + DA +F +++ T+MI +
Sbjct: 428 ALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
A+ LF +++ L P+ ++L AC E+G
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 155/340 (45%), Gaps = 18/340 (5%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
MR G + +T QA + HL SLLKS + S N IS Y+KC
Sbjct: 1 MRSAGTISQQLTRYAAAQALLPGAHLHASLLKS----------GSLASFRNHLISFYSKC 50
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
A F I + VSW+S+V + ++ + M G + +
Sbjct: 51 RRPCCARRFFDEIPDPCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF-DGICDR 308
+L P+A + G VH+ + GF DV V N L++MY G +D AR +F + +R
Sbjct: 109 VLK--CVPDARL-GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
VSW ++S Y + +A+++F M +G P +++ C S +E G+
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
G +V NAL+DMY K G + A +F +P+ VVSW +I+GC LNG
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A++L Q+ L PN T ++L+AC+ G + G I
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQI 325
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 302/579 (52%), Gaps = 33/579 (5%)
Query: 66 KLSDLIYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ + L++ QM +V S + + + A +IFDEM ++ SWN ML + Q G
Sbjct: 47 RAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNG 106
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+E+ RLF + +AD+ + + K L+ + F + D N
Sbjct: 107 RIEDARRLFES------KADWELISWNCMMGGYVKRNRLVDARGIFDRM--PERDEVSWN 158
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
T IS YA+ +L A+ +F E +R V +W +MV+G D++ + M
Sbjct: 159 TMISGYAQNGELLEAQRLF--EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK-- 214
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLISMYSKCGDID 296
+ + ++++ +V + + Q R + F+ +VS NT+I+ Y++ GDI
Sbjct: 215 --NSVSWNAIIAGYVQCKRMDQAREL--------FEAMPCQNVSSWNTMITGYAQNGDIA 264
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR FD + R +SW A+I+GYAQ G +EAL LF M+ GE + T S +S C
Sbjct: 265 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 324
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ ALELGK GL+ V NAL+ MY KCG+I DA +F + EK VVSW T
Sbjct: 325 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 384
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
MIAG A +G EAL LF + + + P+ VT + VL AC+HTG ++KG D
Sbjct: 385 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 444
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
GI+ N + HY+CM DLLGR G+L +A + +++MP + DA WG LL A +IH N E+GE
Sbjct: 445 GITANSK--HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE 502
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A +F++EP ++ YV ++N YA GRW V +R M+ VKK PG S + K
Sbjct: 503 KAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKI 562
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
TFT D H E + Y L+ L L ++E Y S K +
Sbjct: 563 HTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLV 601
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 203/435 (46%), Gaps = 33/435 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYS-----QM 75
WN+ + + +F +M +N I N + ++ + + ++ ++
Sbjct: 64 WNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWEL 123
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
I + + +VK +RL A IFD M RD SWN M+ G+AQ G L RLF +
Sbjct: 124 ISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR 183
Query: 136 GIQADFVTVMGLTQ----------------------AAIHAKHLSLLKSVHSFGIHIGVD 173
+ V G Q AI A ++ + + + +
Sbjct: 184 DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMP 243
Query: 174 -ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
+VS NT I+ YA+ D+ A F + + R +SW +++AG +++L+ +
Sbjct: 244 CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQ--RDSISWAAIIAGYAQSGYGEEALHLF 301
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M +G RL+ +T S LS+ AL G+ VH + G + V N L+ MY KC
Sbjct: 302 VEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC 361
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G+ID A ++F+GI ++ VSW MI+GYA+ G EAL LF +M+ G LPD VT++ ++
Sbjct: 362 GNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVL 421
Query: 353 SGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKI 410
S C +G ++ G ++F + G+ N +ID+ + G + DA+ L +P E
Sbjct: 422 SACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPD 481
Query: 411 VVSWTTMIAGCALNG 425
+W ++ ++G
Sbjct: 482 AATWGALLGASRIHG 496
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ + +I+ W + I + L LF +MK++ N TF CA+++
Sbjct: 270 FDRMPQRDSIS-WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAA 328
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +HG +VK+ + KC +D AY +F+ + ++V SWN M+ G
Sbjct: 329 LELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAG 388
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+A+ GF + L LF +M+ GI D VT++G+ A H
Sbjct: 389 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSH 426
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 190/614 (30%), Positives = 304/614 (49%), Gaps = 18/614 (2%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + V ++ + +F +M + I+P F + AC ++ + +H +
Sbjct: 76 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 135
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ +VK R+D A IF++M DV SWNA++ G G +
Sbjct: 136 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 195
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M+ G+ + + + +A A L + +H F I D+D + + Y
Sbjct: 196 ELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 255
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK L A VF + R ++ WN++++GC++G + D++ + + + G ++ TT
Sbjct: 256 AKNHFLDDAMKVFDWMSHR--DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTT 313
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++L S EA R VH+ GF D V+N LI Y KC + A +F+
Sbjct: 314 LAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 373
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ T+MI+ +Q + A++LF M G PD + S+++ C A E GK
Sbjct: 374 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 433
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ + NAL+ Y+KCGSI DA F +LPE+ VVSW+ MI G A +G
Sbjct: 434 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 493
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL+LF ++++ + PN +T +VL AC H G +++ + GI E H
Sbjct: 494 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE--H 551
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DLLGR GKL +A++ V SMP +++A +WG LL A ++H + E+G+ A LF LE
Sbjct: 552 YSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILE 611
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + +V +AN YA G W+ VA +R +MK + +KK P S + K TF D+ H
Sbjct: 612 PEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSH 671
Query: 607 AESELTYPVLDCLA 620
++ Y LD L
Sbjct: 672 PMTKEIYSKLDELG 685
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 189/406 (46%), Gaps = 17/406 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN+ I V H+ + L QMK + + PN I KACA + I
Sbjct: 173 SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 232
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG ++K+ + K LD A K+FD M+ RD+ WNA++ G + G
Sbjct: 233 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 292
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ +FY +R G+ + T+ + ++ + S + VH+ IG D V N
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I SY KC L A VF E +++ SM+ + D + ++ + M+ G
Sbjct: 353 IDSYWKCSCLSDAIRVF--EECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 410
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + SLL++ A QG+ VH+H I F D N L+ Y+KCG I+ A + F
Sbjct: 411 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 470
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL- 361
+ +R VSW+AMI G AQ G AL LF M G P+ +T+ S++ C +G +
Sbjct: 471 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 530
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
E ++F++ G+ + +ID+ + G + DA EL ++P
Sbjct: 531 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 576
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 166/344 (48%), Gaps = 18/344 (5%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--CGIEERLRTVVSWNSMVAGCT 220
VH+ + G +DV V N ++ Y + A VF G E R VSWN +++
Sbjct: 29 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSE---RNAVSWNGLMSAYV 85
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
D+ D++ + M+++G + ++++ + GR VH+ + G++ DV
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
N L+ MY K G +D A V+F+ + D VSW A+ISG G A+ L M+++G
Sbjct: 146 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 205
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
+P++ + S++ C +GA +LG+ + + + L+DMY+K + DA
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM 265
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++F + + ++ W +I+GC+ G EA +F+ L + L NR T AVL++ T
Sbjct: 266 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS---TA 322
Query: 461 FLEKGWAISIIQYDDKGISY-------NPELDHY---SCMADLL 494
LE A + + I + N +D Y SC++D +
Sbjct: 323 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 366
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 168/376 (44%), Gaps = 3/376 (0%)
Query: 91 LDCAYKIFDEM-AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
+D A ++FDE + R+ SWN ++ + + + +++F M GIQ +
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A ++++ + VH+ + +G + DV N + Y K + +A ++F + + V
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPD--SDV 175
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWN++++GC ++ M +G +V + S+L + A GR +H
Sbjct: 176 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 235
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I D D + L+ MY+K +D A +FD + R + W A+ISG + G DEA
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+F+ + G + T+ +++ A + A G + V N LID
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KC + DA +F +++ T+MI + A+ LF +++ L P+
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 415
Query: 450 LAVLQACTHTGFLEKG 465
++L AC E+G
Sbjct: 416 SSLLNACASLSAYEQG 431
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD-GICDRTRVSWTA 315
P+A + G VH+ + GF DV V N L++MY G +D AR +FD +R VSW
Sbjct: 21 PDAQL-GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 79
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
++S Y + +A+++F M +G P +++ C S ++ G+ G
Sbjct: 80 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 139
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+ +V NAL+DMY K G + A +F +P+ VVSW +I+GC LNG A++L
Sbjct: 140 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 199
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADL 493
Q+ L PN ++L+AC G + G I I N + D Y + D+
Sbjct: 200 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM-----IKANADSDDYIGVGLVDM 254
Query: 494 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ L +A+ M + D +W L+ C
Sbjct: 255 YAKNHFLDDAMKVFDWMSHR-DLILWNALISGC 286
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 203/631 (32%), Positives = 312/631 (49%), Gaps = 57/631 (9%)
Query: 62 KACAKLSDL--IYSQMIHGHIVKSPFVKCD-----------RLDCAYKIFDEMAVRDVAS 108
+ C L I++QM+ + + P+ + LD A K+FD++ ++ S
Sbjct: 147 QQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYS 206
Query: 109 WNAMLVGFAQMG-FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
WN ++ A +++VL + + T L +A + + K+VH
Sbjct: 207 WNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMA 266
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
I DV V N+ I YA C L +A LVF IE + +VSWNSMV G G D
Sbjct: 267 IKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDK 326
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+L+ + M G + T+VS++S+ L GR V + ++++V N I
Sbjct: 327 ALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATID 386
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTA-------------------------------M 316
M+ KCG+++ AR LFD + R VSWT +
Sbjct: 387 MFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVL 446
Query: 317 ISGYAQKGDLDEALRLF--FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
ISGY Q G EAL +F + +G PD VT+LS +S C Q GA+++G+W Y
Sbjct: 447 ISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE 506
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
++ N + +LIDMYSK G + A E+F+++ K V W+ MIAG A++G A++LF
Sbjct: 507 RIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELF 566
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMAD 492
+ E ++PN VTF +L AC+H+G +++G + +D+ Y P+ HYSCM D
Sbjct: 567 LDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRL----FDEMERVYGVVPKTKHYSCMVD 622
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
+LGR G L+EAL F++ MP+ A +WG LL AC IH N+E+ E L ++EP +
Sbjct: 623 VLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGA 682
Query: 553 YVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELT 612
YV ++N YA G W+GV+ +R M+ + +KK G S I+G F D H S
Sbjct: 683 YVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDI 742
Query: 613 YPVLDCLALHSREEAYSSH----LKWIPEHE 639
Y LD + R Y ++ L+++ E E
Sbjct: 743 YAKLDEIMARLRSHGYVANTLCMLQFVEEEE 773
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 217/470 (46%), Gaps = 50/470 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLF-RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN IR ++ +++L+F R + + PN TFP + KA A+ + + +HG
Sbjct: 207 WNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMA 266
Query: 81 VKSPF--------------VKCDRLDCAYKIFD--EMAVRDVASWNAMLVGFAQMGFLEN 124
+K+ F C LD AY +F+ E +D+ SWN+M+ GF Q G+ +
Sbjct: 267 IKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDK 326
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L LF MR G+ + VT++ + A +L+L + V + + +++VCN I
Sbjct: 327 ALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATID 386
Query: 185 SYAKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSM 215
+ KC ++++A +F +E+R + + +WN +
Sbjct: 387 MFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVL 446
Query: 216 VAGCTYGDKFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++G + ++L +R + +G R D T++S LS+ A+ G +H +
Sbjct: 447 ISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE 506
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
L+ ++ +LI MYSK GD++ A +F I ++ W+AMI+G A G + A+ LF
Sbjct: 507 RIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELF 566
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSK 392
M+ P+ VT +++ C SG ++ GK FD G+ + ++D+ +
Sbjct: 567 LDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGR 626
Query: 393 CGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELD 441
G + +A + +P S W ++ C ++G A +L+E++
Sbjct: 627 AGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIE 676
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 166/440 (37%), Gaps = 101/440 (22%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WNS + V K L LF +M+ + PN +T + ACAK +L + +
Sbjct: 308 IVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCD 367
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVAS---------------- 108
+I ++ FVKC ++ A +FD M RDV S
Sbjct: 368 YIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGI 427
Query: 109 ---------------WNAMLVGFAQMGFLENVLRLFYNMRLV--GIQADFVTVMGLTQAA 151
WN ++ G+ Q G + L +F ++L G + D VT++ A
Sbjct: 428 ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+ + + +H + + + ++ + I Y+K D++ A VF I + V
Sbjct: 488 AQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGN--KDVFV 545
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
W++M+AG + + ++ + M + + T +LL + C
Sbjct: 546 WSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCA--C--------------- 588
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFD------GICDRTRVSWTAMISGYAQKGD 325
S G +D + LFD G+ +T+ ++ M+ + G
Sbjct: 589 ------------------SHSGLVDEGKRLFDEMERVYGVVPKTK-HYSCMVDVLGRAGH 629
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK---DNVMV 382
L+EAL+ M A P +++ C G LEL + ACS L+ N
Sbjct: 630 LEEALKFIEGMPLA---PSASVWGALLGACCIHGNLELAE----KACSRLLEIEPGNHGA 682
Query: 383 CNALIDMYSKCGSIGDAREL 402
L ++Y+K G EL
Sbjct: 683 YVLLSNLYAKTGDWEGVSEL 702
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 306/595 (51%), Gaps = 21/595 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYS 73
R+ ++ WN+ IR N ++ L LF QM + P+N T+PF+ KAC
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+IH V S F + C ++ A ++FD M R + SWN M+ G+ +
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKN 202
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G ++ L +F M GI+ D TV+ + + K L + + VH+ + D+SV
Sbjct: 203 GCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVW 262
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ + YAKC ++ A+++F +++R VVSW +M+ G +L + M +
Sbjct: 263 NSLLDMYAKCGNMDEAQMIFYEMDKR--DVVSWTTMMNGYILNGDARSALLLCQMMQFES 320
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ + T+ S+LS+ +L GR +H I + +V V LI MY+KC +++ +
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F + W A+ISG G +A+ LF M P+ T+ S++
Sbjct: 381 RVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLT 440
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKIVVSWTTM 417
L+ + Y G + V LID+YSKCGS+ A +F +P +K +++W+ +
Sbjct: 441 DLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG ++G A+ LF Q+++ ++PN +TF ++L AC+H G +++G + +D
Sbjct: 501 IAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQ 560
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
+S DHY+C+ DLLGR G+L+EA + +++M + + +WG LL +C IH N+E+GE
Sbjct: 561 MSLRT--DHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEV 618
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
A LF+LEP + YV +AN Y+ GRW ++R MM ++K P SL +
Sbjct: 619 AAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 232/487 (47%), Gaps = 24/487 (4%)
Query: 62 KACAKLSDLIYSQMIHGH-----IVKSPF------------VKCDRLDCAYKIFDEMAVR 104
+ C + ++ IH H ++ SP+ C A K+FDE+
Sbjct: 26 QRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELRNP 85
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSV 163
+ SWNAM+ + G + L LF M G + D T + +A + +
Sbjct: 86 SLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALI 145
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H+ + G D+D V N+ ++ Y C ++++A VF + ER T+VSWN+M+ G
Sbjct: 146 HARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRER--TLVSWNTMINGYFKNG 203
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
++L + M+ G D TVVS+L + L GR VH+ D+SV N
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
+L+ MY+KCG++D A+++F + R VSWT M++GY GD AL L M+ P
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKP 323
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+ VT+ S++S C +L+ G+ +A L+ V+V ALIDMY+KC ++ + +F
Sbjct: 324 NFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVF 383
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
++ W +I+GC NG +A++LF Q++ + PN T ++L A L+
Sbjct: 384 SKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQ 443
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTL 522
+ A ++ Y + + ++ + + D+ + G L+ A + +P K D W +
Sbjct: 444 Q--ARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500
Query: 523 LCACKIH 529
+ +H
Sbjct: 501 IAGYGMH 507
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 306/595 (51%), Gaps = 21/595 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYS 73
R+ ++ WN+ IR N ++ L LF QM + P+N T+PF+ KAC
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+IH V S F + C ++ A ++FD M R + SWN M+ G+ +
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKN 202
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G ++ L +F M GI+ D TV+ + + K L + + VH+ + D+SV
Sbjct: 203 GCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVW 262
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ + YAKC ++ A+++F +++R VVSW +M+ G +L + M +
Sbjct: 263 NSLLDMYAKCGNMDEAQMIFYEMDKR--DVVSWTTMMNGYILNGDARSALLLCQMMQFES 320
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ + T+ S+LS+ +L GR +H I + +V V LI MY+KC +++ +
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F + W A+ISG G +A+ LF M P+ T+ S++
Sbjct: 381 RVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLT 440
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKIVVSWTTM 417
L+ + Y G + V LID+YSKCGS+ A +F +P +K +++W+ +
Sbjct: 441 DLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG ++G A+ LF Q+++ ++PN +TF ++L AC+H G +++G + +D
Sbjct: 501 IAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQ 560
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
+S DHY+C+ DLLGR G+L+EA + +++M + + +WG LL +C IH N+E+GE
Sbjct: 561 MSLRT--DHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEV 618
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
A LF+LEP + YV +AN Y+ GRW ++R MM ++K P SL +
Sbjct: 619 AAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 233/487 (47%), Gaps = 24/487 (4%)
Query: 62 KACAKLSDLIYSQMIHGH-----IVKSPFVK--CDRLDCAY----------KIFDEMAVR 104
+ C + ++ IH H ++ SP+ L AY K+FDE+
Sbjct: 26 QRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNP 85
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSV 163
+ SWNAM+ + G + L LF M G + D T + +A + +
Sbjct: 86 SLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALI 145
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H+ + G D+D V N+ ++ Y C ++++A VF + ER T+VSWN+M+ G
Sbjct: 146 HARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRER--TLVSWNTMINGYFKNG 203
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
++L + M+ G D TVVS+L + L GR VH+ D+SV N
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
+L+ MY+KCG++D A+++F + R VSWT M++GY GD AL L M+ P
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKP 323
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+ VT+ S++S C +L+ G+ +A L+ V+V ALIDMY+KC ++ + +F
Sbjct: 324 NFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVF 383
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
++ W +I+GC NG +A++LF Q++ + PN T ++L A L+
Sbjct: 384 SKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQ 443
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTL 522
+ A ++ Y + + ++ + + D+ + G L+ A + +P K D W +
Sbjct: 444 Q--ARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500
Query: 523 LCACKIH 529
+ +H
Sbjct: 501 IAGYGMH 507
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 207/440 (47%), Gaps = 32/440 (7%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+ + R T+ WN+ I + L++F M IEP+ T + C+ L
Sbjct: 179 RVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLK 238
Query: 69 DLIYSQMIHGHI-VKS-------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+L + +H + VK+ + KC +D A IF EM RDV SW M+
Sbjct: 239 ELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMN 298
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G+ G + L L M+ ++ +FVT+ + A L + +H + I +++
Sbjct: 299 GYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLES 358
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+V V I YAKC+++ ++ VF ++ RT WN++++GC + ++ ++
Sbjct: 359 EVIVETALIDMYAKCNNVNLSFRVFSKTSKQ-RT-APWNAIISGCIHNGLSRKAIELFKQ 416
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ + T+ SLL ++ L Q R +H + I GF + V LI +YSKCG
Sbjct: 417 MLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGS 476
Query: 295 IDSARVLFDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
++SA +F+GI D+ ++W+A+I+GY G + A+ LF M +G P+ +T S++
Sbjct: 477 LESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSIL 536
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNA-----LIDMYSKCGSIGDARELFYAL- 406
C +G ++ G + L+DN M +ID+ + G + +A EL +
Sbjct: 537 HACSHAGLVDEGLGLFKFM----LEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMA 592
Query: 407 --PEKIVVSWTTMIAGCALN 424
P V W ++ C ++
Sbjct: 593 FRPNHAV--WGALLGSCVIH 610
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDIDSARVLFDGI 305
SLL +++ + +H+H I G ++++L + Y+ G AR LFD +
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELG 364
+ + SW AMI Y G +AL LF M A+G PD T +I CG E+G
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
G + V N+L+ MY CG + AR +F + E+ +VSW TMI G N
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKN 202
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPE 483
G EAL +F ++ + P+ T ++VL C++ LE G + ++++ + G +
Sbjct: 203 GCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLG----ED 258
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ ++ + D+ + G + EA M K D W T++
Sbjct: 259 ISVWNSLLDMYAKCGNMDEAQMIFYEMD-KRDVVSWTTMM 297
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 200/616 (32%), Positives = 310/616 (50%), Gaps = 53/616 (8%)
Query: 26 IREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF 85
++ + + L + + M +N I P++ T+ + + C L ++++H H++++ F
Sbjct: 36 VKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQF 95
Query: 86 ---------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
VK L A ++FDEM V++V SW AM+ +A+ + L FY
Sbjct: 96 ECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFY 155
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M+ VGIQ + T + A L +L H + G +++V V N + YAK
Sbjct: 156 EMQDVGIQPNHFTFASILPACTD---LEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRG 212
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM----------MYNGF 240
++ A +F + +R VVSWN+M+AG +D+L ++ + M G+
Sbjct: 213 CIEFARELFDKMPQR--DVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGY 270
Query: 241 RL--DVTTVVSLL-----SSFVCPEALVQGRLVHSHGIHYGFDL-------DVSVINTLI 286
DV V L + V ++ G V + + F L +V N +I
Sbjct: 271 AQCGDVENAVELFEKMPEQNLVSWNTMIAG-YVQNGSVKEAFKLFQIMPERNVISWNAVI 329
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
S +++ G ++ A LF + + VSW AMI+GY+Q G + AL+LF M+ P+
Sbjct: 330 SGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTE 389
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T ++ C LE G G + +V+V N L+ MY+KCGSI DAR++F +
Sbjct: 390 TFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRM 449
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
++ S + MI G A+NG E+L+LF Q+ L+P+RVTF+ VL AC H G +++G
Sbjct: 450 RQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGR 509
Query: 467 AISIIQYDDKGISY---NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
QY D + P ++HY CM DLLGR G EA D + MPIK DA +WG+LL
Sbjct: 510 -----QYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLL 564
Query: 524 CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
AC+ H NI++GE VA L L P + APYV ++N YA GRWD + ++R MK +VKK
Sbjct: 565 SACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKK 624
Query: 584 FPGQSLFHINGKTCTF 599
G S I + F
Sbjct: 625 KLGCSWIVIKKQVHAF 640
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 201/438 (45%), Gaps = 42/438 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL--IYSQMIHGH 79
W + I + L F +M+ I+PN+ TF I AC L L + +++ G
Sbjct: 134 WTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGG 193
Query: 80 IVKSPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF- 129
+ FV +D A ++FD+M RDV SWNAM+ G+ Q G +E+ L+LF
Sbjct: 194 FESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQ 253
Query: 130 ---------YNMRLVGIQ--ADFVTVMGL-------------TQAAIHAKHLSLLKSVHS 165
+N + G D + L T A + ++ S+ ++
Sbjct: 254 EIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKL 313
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
F I + +V N IS +A+ ++ A +F + E VVSWN+M+AG + +
Sbjct: 314 F--QIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPE--CNVVSWNAMIAGYSQNGQA 369
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
+++L + M + + T +L + L QG H I GF DV V NTL
Sbjct: 370 ENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTL 429
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+ MY+KCG I+ AR +FD + + S +AMI GYA G E+L LF M+ G PD
Sbjct: 430 VGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDR 489
Query: 346 VTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
VT + ++S C +G ++ G+ +FD + + +ID+ + G +A +L
Sbjct: 490 VTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLIN 549
Query: 405 ALPEKIVVS-WTTMIAGC 421
+P K W ++++ C
Sbjct: 550 KMPIKPDADMWGSLLSAC 567
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 27/237 (11%)
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
++ ++G L EAL + M G P T S++ GC + +L K +
Sbjct: 34 GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93
Query: 375 GLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
+ ++ + N L+ +Y K GS+ +AR +F +P K VVSWT MIA A + EAL
Sbjct: 94 QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGF 153
Query: 434 FHQLMELDLRPNRVTFLAVLQACT--------HTGFLEKGWAISI--------------- 470
F+++ ++ ++PN TF ++L ACT H ++ G+ ++
Sbjct: 154 FYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGC 213
Query: 471 IQYDDKGISYNPELDHYSCMADLLG--RKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
I++ + P+ D S A + G + G +++AL Q +P K D W T++
Sbjct: 214 IEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP-KRDVITWNTMMAG 269
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+L + + WN+ I +A L LF QM+ D++PN TF + ACA L+
Sbjct: 343 KLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALA 402
Query: 69 DLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L H +++S F KC ++ A K+FD M +D AS +AM+V
Sbjct: 403 VLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIV 462
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G+A G + L LF M+ G++ D VT +G+ A HA
Sbjct: 463 GYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHA 502
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 198/604 (32%), Positives = 312/604 (51%), Gaps = 29/604 (4%)
Query: 47 QNDIEPNNLTFPFIA-KACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRL 91
Q+ +P NLT + +A A +L + IH +++ + F+ KC+++
Sbjct: 29 QSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQM 88
Query: 92 DCAYKIF-DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ A IF D +V ++NA++ GF GF E + MR G+ D T +A
Sbjct: 89 NFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKA 148
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ + K +H G++ DV + + ++ Y K ++ A++ F E +R VV
Sbjct: 149 CLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAF--EELPIRDVV 203
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
WN+MV G +F+ L +R M TV +LS F L GR++H
Sbjct: 204 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA 263
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ G+D V+V N+LI MY KC I+ A +F+ + ++ SW +++S + Q GD D L
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTL 323
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCN 384
RL M AG PDLVTV +++ C AL G+ Y GL D+V++ N
Sbjct: 324 RLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKN 383
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
A+IDMY+KCGS+ DA +F + K V SW MI G ++G EAL++F ++ E+ L+P
Sbjct: 384 AVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKP 443
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+ VTF+ VL AC+H GF+ +G ++Q K P ++HY+C+ D+LGR G+L EA
Sbjct: 444 DEVTFVGVLSACSHAGFVSQGRNF-LVQMKSK-YDVAPTIEHYTCVIDMLGRAGQLDEAY 501
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ +MPI+++ +W LL AC++H + + E A +F+LEP YV M+N Y G
Sbjct: 502 ELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVG 561
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
R++ V +R M++ V+K PG S + F + DR H E+ Y L+ L R
Sbjct: 562 RYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLR 621
Query: 625 EEAY 628
E Y
Sbjct: 622 EHGY 625
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 210/446 (47%), Gaps = 35/446 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I + + +++M+ + P+ TFP KAC D++ + IHG +
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLF 163
Query: 82 K-----SPFVKCDRLDCAYKI---------FDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F+ ++C K F+E+ +RDV WNAM+ G+AQ+G E VL
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 223
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + TV G+ L+ + +H F + +G D+ V+V N+ I Y
Sbjct: 224 TFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F + E + + SWNS+V+ D +L M+ G + D+ TV
Sbjct: 284 KCKCIEDALEIFEMMRE--KDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGF-----DL-DVSVINTLISMYSKCGDIDSARVL 301
++L + AL+ GR +H + I G D+ DV + N +I MY+KCG + A ++
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + ++ SW MI GY G +EAL +F M PD VT + ++S C +G +
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 461
Query: 362 ELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWT 415
G+ F Y + ++ V IDM + G + +A EL +P E V W
Sbjct: 462 SQGRNFLVQMKSKYDVAPTIEHYTCV----IDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 416 TMIAGCALNGEFVEALDLFHQLMELD 441
++A C L+ V A ++ EL+
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELE 543
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 201/435 (46%), Gaps = 23/435 (5%)
Query: 128 LFYNMRLV--GIQA-----DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
LF+N + IQ+ + T + QA+ H K+LS K +HS+ + G
Sbjct: 17 LFFNFSSISTAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSIT 76
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I+ Y+KC+ + A +F + V ++N++++G ++ FY+ M G
Sbjct: 77 SLINMYSKCNQMNFALSIFSDPTHEI-NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGV 135
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D T + + C + L + + +H +G +LDV + + L++ Y K G ++ A+V
Sbjct: 136 IPDKFTFPCAIKA--CLDVL-EIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQV 192
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F+ + R V W AM++GYAQ G + L F M +P TV ++S G
Sbjct: 193 AFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGD 252
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L G+ +A G V V N+LIDMY KC I DA E+F + EK + SW ++++
Sbjct: 253 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSV 312
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI------SIIQYD 474
G+ L L +++ ++P+ VT VL AC+H L G I S + D
Sbjct: 313 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 372
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH--LNI 532
K I ++ + + D+ + G +++A + M K D W ++ +H N
Sbjct: 373 GKDID---DVLLKNAVIDMYAKCGSMRDAHLVFERMSNK-DVASWNIMIMGYGMHGYGNE 428
Query: 533 EIGEYVAYCLFKLEP 547
+ + C +L+P
Sbjct: 429 ALEMFSRMCEVQLKP 443
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R I WNS + + TL L +M I+P+ +T + AC+ L+ L++ +
Sbjct: 299 REKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGR 358
Query: 75 MIHGHIVKSP--------------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
IHG+++ S + KC + A+ +F+ M+ +DVASWN M++
Sbjct: 359 EIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM 418
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
G+ G+ L +F M V ++ D VT +G+ A HA +S
Sbjct: 419 GYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 462
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 208/656 (31%), Positives = 314/656 (47%), Gaps = 89/656 (13%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMA 102
F + C KL ++ +HG ++++PF KC LD A K+FD M+
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 103 VRDV-------------------------------ASWNAMLVGFAQMGFLENVLRLFYN 131
R+V SWN+M+ GFAQ E L F
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 132 M-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M R + D+ GL+ A K L L +H DV + + I Y+KC
Sbjct: 147 MHRDDFVLNDYSFGSGLS-ACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCG 205
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
+ A VF G+EE+ VVSWN ++ ++L + M GF+ D T+ S+
Sbjct: 206 LVGCARRVFDGMEEK--NVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263
Query: 251 LSSFVCPEALVQGRLVHSHGIHY-GFDLDVSVINTLISMYSKCGDIDSARVLFD------ 303
+S+ A +G +H+ + F D+ + N L+ MY+KCG ++ AR +FD
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323
Query: 304 -------------------------GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
I + VSW A+I+GY Q G+ +EAL LF ++
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDMYSK 392
P T ++++ LELG+ ++ G + ++ V N+LIDMY K
Sbjct: 384 ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
CGS+ + +F + EK VSW TMI G A NG +EAL+LF +++E +P+ VT +
Sbjct: 444 CGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
L AC+H G +E+G + G+ P DHY+CM DLLGR G L+EA D ++SMP
Sbjct: 504 LCACSHAGLVEEGRRYFFSMTKEHGLL--PVKDHYTCMVDLLGRAGCLEEAKDLIESMPK 561
Query: 513 KSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
+ DA +W +LL ACK+H NI +G+YVA +F+++P S+ PYV +AN Y+ GRW ++
Sbjct: 562 QPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSV 621
Query: 573 RTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
R +M+R V K PG S I F +D+ H + + Y +L L H R+ Y
Sbjct: 622 RKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGY 677
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 220/477 (46%), Gaps = 62/477 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + + L F +M ++D N+ +F AC++L DL IHG I
Sbjct: 124 WNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLIS 183
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC + CA ++FD M ++V SWN ++ + Q G L
Sbjct: 184 KSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALE 243
Query: 128 LFYNMRLVGIQADFVTVMGLTQA-----------AIHAKHLSLLKSVHSFGIHIGVDADV 176
F M +G + D VT+ + A IHA+ + K + + +
Sbjct: 244 AFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMY 303
Query: 177 SVC---------------------NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ C T +S YAK +K A +F I++ + +VSWN++
Sbjct: 304 AKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQ--KDIVSWNAL 361
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+AG T + +++L +R + T +LL++ L GR HSH + +GF
Sbjct: 362 IAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGF 421
Query: 276 ------DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ D+ V N+LI MY KCG ++ +F+ + ++ VSW MI GYAQ G EA
Sbjct: 422 RFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEA 481
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGL---KDNVMVCNA 385
L LF M +GE PD VT++ + C +G +E G ++F + GL KD+
Sbjct: 482 LELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHY---TC 538
Query: 386 LIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
++D+ + G + +A++L ++P++ V W+++++ C ++ + ++ E+D
Sbjct: 539 MVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEID 595
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ I WN+ I E + L LFR +K+ + P + TF + A A L+DL +
Sbjct: 351 KQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGR 410
Query: 75 MIHGHIVKSPF--------------------VKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
H H+VK F +KC ++ ++F+ M +D SWN M++
Sbjct: 411 QAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMII 470
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G+AQ G+ L LF M G + D VT++G A HA
Sbjct: 471 GYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHA 510
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 297/598 (49%), Gaps = 68/598 (11%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
V S + K +D + FD++ RD SW M+VG+ +G +R+ +M GI+
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T+ + + + + K VHSF + +G+ +VSV N+ ++ YAKC D MA+ VF
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 201 GIEER-----------------------------LRTVVSWNSMVAGCTYGDKFDDSLNF 231
+ R R +V+WNSM++G +L+
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 232 YRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M+ + D T+ S+LS+ E L G+ +HSH + GFD+ V+N LISMYS
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 291 KCGDIDSAR-----------------VLFDG----------------ICDRTRVSWTAMI 317
+CG +++AR L DG + DR V+WTAMI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
GY Q G EA+ LF +M G+ P+ T+ +M+S +L GK A G
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+V V NALI MY+K G+I A F + E+ VSWT+MI A +G EAL+LF
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD-DKGISYNPELDHYSCMADLLG 495
++ LRP+ +T++ V ACTH G + +G + D DK I P L HY+CM DL G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII---PTLSHYACMVDLFG 562
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G L+EA +F++ MPI+ D WG+LL AC++H NI++G+ A L LEP ++ Y
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTY 613
+AN Y+ G+W+ A IR MK +VKK G S + K F ED H E Y
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 211/485 (43%), Gaps = 84/485 (17%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N + HK + + M + IEP T + + A + + +H IV
Sbjct: 114 WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV 173
Query: 82 K--------------SPFVKC----------DR---------------------LDCAYK 96
K + + KC DR +D A
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAK 155
F++MA RD+ +WN+M+ GF Q G+ L +F M R + D T+ + A + +
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC-------------------------- 189
L + K +HS + G D V N IS Y++C
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 190 -------DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
D+ A+ +F +++ R VV+W +M+ G + +++N +R M+ G R
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKD--RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T+ ++LS +L G+ +H + G VSV N LI+MY+K G+I SA F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 303 DGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
D I C+R VSWT+MI AQ G +EAL LF M G PD +T + + S C +G +
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 362 ELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
G+ +FD + + ++D++ + G + +A+E +P E VV+W ++++
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS 591
Query: 420 GCALN 424
C ++
Sbjct: 592 ACRVH 596
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 149/338 (44%), Gaps = 67/338 (19%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT +S+Y+K D+ F + +R VSW +M+ G ++ ++ M+ G
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQR--DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD----- 294
T+ ++L+S + G+ VHS + G +VSV N+L++MY+KCGD
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 295 --------------------------IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+D A F+ + +R V+W +MISG+ Q+G
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 329 ALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
AL +F M L PD T+ S++S C L +GK ++ + G + +V NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 388 DMYSKCGSIGDAREL---------------------------------FYALPEKIVVSW 414
MYS+CG + AR L F +L ++ VV+W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
T MI G +G + EA++LF ++ RPN T A+
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NT++S YSK GD+DS FD + R VSWT MI GY G +A+R+ M G
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG-------- 394
P T+ ++++ + +E GK ++ GL+ NV V N+L++MY+KCG
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 395 --------------------SIGD---ARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
+G A F + E+ +V+W +MI+G G + AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 432 DLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAIS----IIQYDDKGISYNPELDH 486
D+F +++ L P+R T +VL AC + L G I +D GI N +
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 487 YS 488
YS
Sbjct: 324 YS 325
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 27/207 (13%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
LFR M PN+ T + + L+ L + + IHG VKS +
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYA 459
Query: 87 KCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
K + A + FD + RD SW +M++ AQ G E L LF M + G++ D +T +
Sbjct: 460 KAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYV 519
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
G+ A HA ++ + F + VD + +S YA DL + +E
Sbjct: 520 GVFSACTHAGLVN--QGRQYFDMMKDVDKIIPT----LSHYACMVDLFGRAGLLQEAQEF 573
Query: 206 LRT------VVSWNSMVAGCTYGDKFD 226
+ VV+W S+++ C D
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVHKNID 600
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL +V + N L+++YSK G AR+LF +P + SW T+++ + G+ + F
Sbjct: 44 GLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFF 103
Query: 435 HQLMELD 441
QL + D
Sbjct: 104 DQLPQRD 110
>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
Length = 570
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 188/506 (37%), Positives = 269/506 (53%), Gaps = 10/506 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAML--------VGFAQMGFLENVLRLFYNMRLVGIQADFV 142
L A ++FD VRD WN +L + + L L+ MR G+ D
Sbjct: 63 LAYARRVFDAAPVRDAYMWNTLLRAHAHSHSHSQSSHSHAVDALALYKRMRAAGVAPDHY 122
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + A A+ L ++VH + +D D V T I+ Y + ++ AELVF
Sbjct: 123 TYPIVLPACAAARQPRLGRAVHGDAVRFALDGDGFVRCTLIAMYFQEGEVADAELVFAES 182
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
RTVVSW +MVAG F ++L + M+ G + T++S L E L
Sbjct: 183 HGSSRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNEITLISFLPCLQGQEWLDA 242
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G +VH I GFD ++ + N LI+MY KCG I A LF+G+ R+ VSW M++ Y Q
Sbjct: 243 GEMVHGFVIRSGFDANIPLANALIAMYGKCGSIPMAEALFEGMAVRSLVSWNTMVAIYEQ 302
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
GD+ EA++ F M D VT++S++S CG+SGALE GKW +A S GL + +
Sbjct: 303 HGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDADARI 362
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N L+DMY+KCG I DAR++F L + VVSW+ MI+ A +G+ EAL LF + +
Sbjct: 363 GNVLVDMYAKCGEIADARKVFDCLHVRGVVSWSAMISAYANHGDSEEALKLFCLMKSEGV 422
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
RPN TF AVL AC H+G + +G D +S P L+HY+C+ D+LGR G+L E
Sbjct: 423 RPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMS--PTLEHYACIVDMLGRAGRLVE 480
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A + ++ M + D +WG L CK+H N+E+ E+VA LF+ + YV M+N Y
Sbjct: 481 AYEIIRGMSLCPDKCVWGAFLGGCKLHSNLELAEFVAKDLFQSGSNDVTFYVLMSNMYFE 540
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQS 588
G + IR MK ++KK G S
Sbjct: 541 AGMLEDAERIRRAMKEMELKKTAGHS 566
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 217/442 (49%), Gaps = 36/442 (8%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-----SPFVKCDRLD 92
L L+++M+ + P++ T+P + ACA + +HG V+ FV+C +
Sbjct: 105 ALALYKRMRAAGVAPDHYTYPIVLPACAAARQPRLGRAVHGDAVRFALDGDGFVRCTLIA 164
Query: 93 CAYK---------IFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
++ +F E + R V SW AM+ G+ Q F L LF M G+ +
Sbjct: 165 MYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNE 224
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
+T++ + L + VH F I G DA++ + N I+ Y KC + MAE +F G
Sbjct: 225 ITLISFLPCLQGQEWLDAGEMVHGFVIRSGFDANIPLANALIAMYGKCGSIPMAEALFEG 284
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ +R++VSWN+MVA +++ F+ M+ D T+VS+LS+ AL
Sbjct: 285 MA--VRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALE 342
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G+ VH +G D D + N L+ MY+KCG+I AR +FD + R VSW+AMIS YA
Sbjct: 343 TGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVVSWSAMISAYA 402
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 380
GD +EAL+LF M++ G P+ T +++ CG SG + G K F++ + +
Sbjct: 403 NHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTL 462
Query: 381 MVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIAGCALN-----GEFVEALD 432
++DM + G + +A E+ + P+K V W + GC L+ EFV A D
Sbjct: 463 EHYACIVDMLGRAGRLVEAYEIIRGMSLCPDKCV--WGAFLGGCKLHSNLELAEFV-AKD 519
Query: 433 LFHQLMELDLRPNRVTFLAVLQ 454
LF N VTF ++
Sbjct: 520 LFQS------GSNDVTFYVLMS 535
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 165/409 (40%), Gaps = 54/409 (13%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S T+ W + + V + L LF M + PN +T L +M
Sbjct: 186 SRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNEITLISFLPCLQGQEWLDAGEM 245
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG +++S F KC + A +F+ MAVR + SWN M+ + Q G
Sbjct: 246 VHGFVIRSGFDANIPLANALIAMYGKCGSIPMAEALFEGMAVRSLVSWNTMVAIYEQHGD 305
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ ++ F+ M + D VT++ + A + L K VH F G+DAD + N
Sbjct: 306 VVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDADARIGNV 365
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGF 240
+ YAKC ++ A VF + +R VVSW++M++ +GD +++L + M G
Sbjct: 366 LVDMYAKCGEIADARKVFDCLH--VRGVVSWSAMISAYANHGDS-EEALKLFCLMKSEGV 422
Query: 241 RLDVTTVVSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R + T ++L + C + LV L H N+++S Y ++
Sbjct: 423 RPNSFTFTAVLVA--CGHSGLVNEGLKH--------------FNSILSDYQMSPTLEHYA 466
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+ D + + G L EA + M PD + + GC
Sbjct: 467 CIVDML---------------GRAGRLVEAYEIIRGMSLC---PDKCVWGAFLGGCKLHS 508
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
LEL ++ G D V + +MY + G + DA + A+ E
Sbjct: 509 NLELAEFVAKDLFQSGSND-VTFYVLMSNMYFEAGMLEDAERIRRAMKE 556
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 209/628 (33%), Positives = 327/628 (52%), Gaps = 35/628 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ--MIHGH 79
WN + + L F + + +PN + + +A +L IYSQ HG+
Sbjct: 116 WNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELK--IYSQGFAFHGY 173
Query: 80 IVKSPF-----VKCDRLDC--------AYKIFDEMAVR-DVASWNAMLVGFAQMGFLENV 125
I +S F V+ L AYK+F EM+VR DV SW+ M+ GF Q+G E
Sbjct: 174 IFRSGFSAILSVQNSLLSLYAEVHMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQG 233
Query: 126 LRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+F NM GI D VTV+ + +A + K +SL VH I G++ D+ V N+ I
Sbjct: 234 FLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLID 293
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+KC ++ A F I E+ ++SWN M++ + ++L M+ G D
Sbjct: 294 MYSKCFNVHSAFKAFKEIPEK--NIISWNLMLSAYILNESHLEALALLGTMVREGAEKDE 351
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ ++L ++ R VH I G++ + ++N++I Y+KC ++ AR++FDG
Sbjct: 352 VTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDG 411
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + V+W+ MI+G+A+ G DEA+ +F M +P+ V++++++ C S L
Sbjct: 412 MNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQS 470
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
KW A GL V + ++IDMYSKCG I + F +P+K VV W+ MI+ +N
Sbjct: 471 KWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRIN 530
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EAL LF ++ + +PN VT L++L AC+H G +E+G + GI P L
Sbjct: 531 GLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIE--PGL 588
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG--IWGTLLCACKIHLNIEIGEYVAYCL 542
+HYSC+ D+L R GK EAL+ ++ +P + +AG IWGTLL +C+ + NI +G A +
Sbjct: 589 EHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRV 648
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
+LEP S+A Y+ +N YA G A +R + K VK G SL HIN +T F A
Sbjct: 649 LQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAG 708
Query: 603 DRYHAESELTYPV---------LDCLAL 621
D + ++ Y + +DCL L
Sbjct: 709 DVLNPRADEIYLMVKKLHGVMKIDCLKL 736
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 252/532 (47%), Gaps = 44/532 (8%)
Query: 24 SQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
S+I++A + L L+ +++ + + + P I KAC+ S + + M HG ++K
Sbjct: 17 SKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAM-HGCLIK 75
Query: 83 SP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
++K LD A + FD +D SWN M+ G G + L
Sbjct: 76 QGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCW 135
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F R Q + +++ + QA K S + H + G A +SV N+ +S YA+
Sbjct: 136 FIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAE 195
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTV 247
+ A +F + R VVSW+ M+ G + + +R+M+ G D TV
Sbjct: 196 V-HMYFAYKLFGEMSVR-NDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTV 253
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS+L + + + G +VH I G + D+ V N+LI MYSKC ++ SA F I +
Sbjct: 254 VSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPE 313
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SW M+S Y EAL L M G D VT+ + L++ K F
Sbjct: 314 KNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTL---------ANVLQIAKHF 364
Query: 368 -DNYACSG--------GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
D+ C G + N ++ N++ID Y+KC + AR +F + +K VV+W+TMI
Sbjct: 365 LDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMI 424
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKG 477
AG A NG+ EA+ +F Q+ E ++ PN V+ + +++AC + L + WA I +G
Sbjct: 425 AGFARNGKPDEAISVFKQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAV--RRG 481
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ E+ + + D+ + G ++ ++ +P K + W ++ A +I+
Sbjct: 482 LA--SEVAIGTSIIDMYSKCGDIEASIRAFNQIPQK-NVVCWSAMISAFRIN 530
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 314/627 (50%), Gaps = 19/627 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN + + + E + + F M + + + LTF + A L+ L + I
Sbjct: 869 SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQI 928
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
HG +V+S +VK + A +F +M D+ SWN M+ G A G
Sbjct: 929 HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLE 988
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E + +F ++ G+ D TV + +A + L +H+ + GV D V T
Sbjct: 989 ECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTT 1048
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I Y+K ++ AE +F + + + SWN+M+ G F +L Y M +G R
Sbjct: 1049 LIDVYSKSGKMEEAEFLF--VNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGER 1106
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T+ + + L QG+ + + + GF+LD+ VI+ ++ MY KCG+++SAR +
Sbjct: 1107 ANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRI 1166
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ I V+WT MISG + G + AL + M + PD T +++ C AL
Sbjct: 1167 FNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTAL 1226
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E G+ + V +L+DMY+KCG+I DAR LF + SW MI G
Sbjct: 1227 EQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGL 1286
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A +G EAL F ++ + P+RVTF+ VL AC+H+G + + + GI
Sbjct: 1287 AQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIE-- 1344
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
PE++HYSC+ D L R G+++EA + SMP ++ A ++ TLL AC++ ++ E G+ VA
Sbjct: 1345 PEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEK 1404
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L LEP +A YV ++N YA +W+ VA+ R MM++ VKK PG S + K F A
Sbjct: 1405 LLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVA 1464
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
DR H E+++ Y ++ + REE Y
Sbjct: 1465 GDRSHEETDVIYNKVEYIMKRIREEGY 1491
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 234/518 (45%), Gaps = 26/518 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN ++ V+ ++ LLLF + + + P+++T +A+ +++ Q+ +
Sbjct: 796 WNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQ---L 852
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
K+ K + D+ DV +WN L F Q G + F +M + D
Sbjct: 853 KAYGTKL------FMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDG 906
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
+T + + L L K +H + G+D VSV N I+ Y K + A VF
Sbjct: 907 LTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQ 966
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ E +VSWN+M++GC + S+ + ++ G D TV S+L + C +L
Sbjct: 967 MNE--VDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRA--C-SSLG 1021
Query: 262 QG----RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
G +H+ + G LD V TLI +YSK G ++ A LF SW AM+
Sbjct: 1022 GGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMM 1081
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
GY GD +ALRL+ M+ +GE + +T+ + G L+ GK G
Sbjct: 1082 HGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFN 1141
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
++ V + ++DMY KCG + AR +F +P V+WTTMI+GC NG+ AL +H +
Sbjct: 1142 LDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHM 1201
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLG 495
++P+ TF +++AC+ LE+G I + N D + + + D+
Sbjct: 1202 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHA-----NTVKLNCAFDPFVMTSLVDMYA 1256
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ G +++A + A W ++ H N E
Sbjct: 1257 KCGNIEDARGLFKRTNTSRIAS-WNAMIVGLAQHGNAE 1293
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 188/423 (44%), Gaps = 35/423 (8%)
Query: 85 FVKCDRLDCAYKIFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ KC L A K+FD RD+ +WNA+L A + LF +R + A
Sbjct: 671 YSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKA--RDGFHLFRLLRRSFVSATRH 728
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + + + + S +S+H + + IG+ DV V ++ YAK ++ A ++F G+
Sbjct: 729 TLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGM 788
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
LR VV WN M+ ++L + G R D T+ +L + +++
Sbjct: 789 G--LRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLE 846
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
+L + T + MY D ++W +S + Q
Sbjct: 847 WQLKQ-----------LKAYGTKLFMYDDDDDGSDV------------IAWNKTLSWFLQ 883
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+G+ EA+ F M + D +T + M+S LELGK GL V V
Sbjct: 884 RGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSV 943
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N LI+MY K GS+ AR +F+ + E +VSW TMI+GCAL+G ++ +F L+ L
Sbjct: 944 GNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGL 1003
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKL 500
P++ T +VL+AC+ G G Q + LD + + + D+ + GK+
Sbjct: 1004 LPDQFTVASVLRACSSLG----GGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKM 1059
Query: 501 KEA 503
+EA
Sbjct: 1060 EEA 1062
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 4/203 (1%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L + L G+ H+ + G D + N LI+MYSKCG + SAR LFD D
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 309 TR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R V+W A++S +A K + LF + + T+ + C S + +
Sbjct: 691 SRDLVTWNAILSAHADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
YA GL+ +V V AL+++Y+K G I +AR LF + + VV W M+ G
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808
Query: 427 FVEALDLFHQLMELDLRPNRVTF 449
EAL LF + LRP+ VT
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVTL 831
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 153/383 (39%), Gaps = 39/383 (10%)
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
AI A L L K H+ + G D + N I+ Y+KC L A +F + R +V
Sbjct: 636 AIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLV 695
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+WN++++ + DK D + +R + + T+ + + + +H +
Sbjct: 696 TWNAILSA--HADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYA 753
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ G DV V L+++Y+K G I ARVLFDG+ R V W M+ Y G EAL
Sbjct: 754 VKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEAL 813
Query: 331 RLFFAMEAAGELPDLVTVLSMISGC-GQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
LF G PD VT+ ++ + LE W + G K + M
Sbjct: 814 LLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLE---WQLKQLKAYGTK---------LFM 861
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y D V++W ++ GE EA+D F ++ + + +TF
Sbjct: 862 YDDDDDGSD------------VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTF 909
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY----SCMADLLGRKGKLKEALD 505
+ +L LE G I GI LD +C+ ++ + G + A
Sbjct: 910 VVMLSVVAGLNCLELGKQI-------HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRART 962
Query: 506 FVQSMPIKSDAGIWGTLLCACKI 528
M + D W T++ C +
Sbjct: 963 VFWQMN-EVDLVSWNTMISGCAL 984
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 322/627 (51%), Gaps = 26/627 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I+ + + + + +M ++ + T+PF+ K+ A +S L + IH ++
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 82 KSPFVK----CD-------RLDCAY---KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K FV C+ +L CA+ K+F+EM RD+ SWN+M+ G+ +G + L
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLM 217
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISSY 186
LF M G + D + M A H + K +H + ++ DV V + + Y
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC--TYGDKFDDSLNFYRHMMYNGFRLDV 244
+K ++ AE +F G+ +R +V+WN M+ GC G D L F + NG + DV
Sbjct: 278 SKYGEVSYAERIFNGMIQR--NIVAWNVMI-GCYARNGRVTDAFLCFQKMSEQNGLQPDV 334
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T ++LL + A+++GR +H + + GF + + LI MY +CG + SA V+FD
Sbjct: 335 ITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDR 390
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ ++ +SW ++I+ Y Q G AL LF + + +PD T+ S++ +S +L G
Sbjct: 391 MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ Y N ++ N+L+ MY+ CG + DAR+ F + K VVSW ++I A++
Sbjct: 451 REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVH 510
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G ++ LF +++ + PN+ TF ++L AC+ +G +++GW + GI +P +
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGI--DPGI 568
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY CM DL+GR G A F++ MP A IWG+LL A + H +I I E+ A +FK
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFK 628
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
+E + YV + N YA GRW+ V I+ +M+ + + +S GK+ FT DR
Sbjct: 629 MEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDR 688
Query: 605 YHAESELTYPVLDCLALHSREEAYSSH 631
H + Y VLD ++ EE H
Sbjct: 689 SHVATNKIYEVLDVVSRMVGEEDIYVH 715
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 228/468 (48%), Gaps = 20/468 (4%)
Query: 4 SSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA 63
++L + RIY S +S+ + K ++ L + +P L K
Sbjct: 3 ATLLSQCYRIYNSDACKCVSSENHQTTGKRNGNRNL----EFDSGISKPARLVLRDRYKV 58
Query: 64 CAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+++D ++ + G F ++ A ++FDEM D WN M+ GF G
Sbjct: 59 TKQVNDPALTRALRG------FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
++ + M G++AD T + ++ L K +H+ I +G +DV VCN+ I
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRL 242
S Y K AE VF + E R +VSWNSM++G GD F SL ++ M+ GF+
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPE--RDIVSWNSMISGYLALGDGF-SSLMLFKEMLKCGFKP 229
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVL 301
D + +S L + + G+ +H H + + DV V+ +++ MYSK G++ A +
Sbjct: 230 DRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGA 360
F+G+ R V+W MI YA+ G + +A F M E G PD++T ++++ S
Sbjct: 290 FNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAI 346
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LE G+ YA G ++++ ALIDMY +CG + A +F + EK V+SW ++IA
Sbjct: 347 LE-GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAA 405
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
NG+ AL+LF +L + L P+ T ++L A + L +G I
Sbjct: 406 YVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 303/590 (51%), Gaps = 20/590 (3%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI---VKSP-----------FVKCDR 90
M+ I + ++ + +AC K+ L ++ H + VK+P + KC
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A K+FDEM R++ SWN ++ +A+ G + +F NM + + + T +G ++
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS-YAKCDDLKMAELVFCGIEERLRTV 209
++ L + K +HS I G+ ++ SV NT IS+ Y KC L+ AELVF + E+
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASV-NTAISNMYVKCGWLEGAELVFEKMSEK--NA 177
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V+W ++ G T ++ D+L + M+ G LD +L + E L GR +H H
Sbjct: 178 VAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGH 237
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ G + +VSV L+ Y KC +++SA F+ I + VSW+A+I+GY Q G+ +EA
Sbjct: 238 IVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEA 297
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L+ F ++ + T S+ C G A L +A+I M
Sbjct: 298 LKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITM 357
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
YS+CG + A +F ++ + V+WT +IAG A G EAL LF ++ + +RPN VTF
Sbjct: 358 YSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTF 417
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+AVL AC+H+G + +G + G++ +DHY CM D+ R G L+EAL+ ++S
Sbjct: 418 IAVLTACSHSGLVIEGRQYLESMSSNYGVATT--IDHYDCMVDIYSRAGFLQEALELIRS 475
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
MP DA W LL C + N+EIGE A LF+L+P A Y+ M N YA G+W
Sbjct: 476 MPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEA 535
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
AN+R MM ++K S + GK F D++H ++E Y L+ L
Sbjct: 536 ANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEAL 585
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 204/423 (48%), Gaps = 18/423 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + WN+ I K +F M + + +PN T+ ++ S L +
Sbjct: 72 RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGK 131
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH H ++S +VKC L+ A +F++M+ ++ +W ++VG+ Q
Sbjct: 132 QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAE 191
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ L LF M G++ D + +A + L+ + +H + +G++++VSV
Sbjct: 192 RQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGT 251
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ Y KC +L+ A F I E VSW++++ G +F+++L + +
Sbjct: 252 PLVDFYVKCSNLESATKAFEWISE--PNDVSWSALITGYCQMGEFEEALKTFESLRTRSV 309
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
++ T S+ + G H+ I + +I+MYS+CG +D A
Sbjct: 310 DINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATR 369
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG- 359
+F+ I D V+WTA+I+GYA +G+ EAL+LF M+ G P+ VT +++++ C SG
Sbjct: 370 VFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGL 429
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMI 418
+E ++ ++ + + G+ + + ++D+YS+ G + +A EL ++P +SW ++
Sbjct: 430 VIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489
Query: 419 AGC 421
GC
Sbjct: 490 GGC 492
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 315/588 (53%), Gaps = 26/588 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + ++ F M+ +P+ ++ I AC+KL ++ + H
Sbjct: 426 WNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSF 485
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F C +L ++K+F +M +R+ SWN ++ G G + +
Sbjct: 486 RKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVA 545
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L + M+ ++ D VT++ + A++L ++H + I G DVS+ N IS Y
Sbjct: 546 LLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYF 605
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
C D+ + +F + R++VSWN+++ G + ++ + + M+ G + + T+
Sbjct: 606 NCGDINAGKFLFEVMP--WRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTL 663
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL S C L+QG+ +H+ + G ++ +I +LISMY++ +I+S LF+
Sbjct: 664 LNLLPS--C-RTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGK 720
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
W A++S Y Q + E++ F + A PD +T LS+IS C Q +L L
Sbjct: 721 EDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSV 780
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y G ++++ NALID++++CG+I A+++F L K VSW+TMI G L+G+
Sbjct: 781 MAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDS 840
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELD 485
AL L Q+ ++P+ +T+ +VL AC+H GF+++GW I S+++ +G+ ++
Sbjct: 841 EAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVE---EGVPR--RME 895
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLLGR G+L EA DFV+ +P K + +LL AC IH N+++GE ++ LF+L
Sbjct: 896 HYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFEL 955
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+P ++ YV + N YA GRW +R+ M+ Q++K PG SL N
Sbjct: 956 DPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVEGN 1003
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 219/449 (48%), Gaps = 16/449 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + RQ+ + ++PN TF I C ++ L + IHG +V
Sbjct: 224 WNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVV 283
Query: 82 KSPFVKCDRLD--------------CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F + L A +FD A ++V WN+M+ +AQ +
Sbjct: 284 KSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFK 343
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M +Q + VT + + ++ + KS+H+ + +D+ +SV +S YA
Sbjct: 344 MFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYA 403
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K DL A+ +F + R ++SWNSM++G + ++ S++ + M + GF D ++
Sbjct: 404 KLGDLNSADFIFYQMPRR--NLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISI 461
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V++LS+ EA++ G+ H+ FD ++++ N L++ YS CG + S+ LF +
Sbjct: 462 VNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPL 521
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R +SW +ISG GD +A+ L M+ DLVT++S+I C + L G
Sbjct: 522 RNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTL 581
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
YA G +V + NALI MY CG I + LF +P + +VSW +I G +
Sbjct: 582 HGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQ 641
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQAC 456
E + F Q++ +PN VT L +L +C
Sbjct: 642 NEVMASFCQMIREGQKPNYVTLLNLLPSC 670
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 224/448 (50%), Gaps = 16/448 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N IR + L ++ + + ++ TFPF+ KAC L + ++ +H +++
Sbjct: 124 NLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLR 183
Query: 83 SPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ F K R+ A + D+++ D+ +WNA++ G++ GF + V +
Sbjct: 184 TSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEV 243
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
+ +G++ + T + K L + KS+H F + G +D + IS YA
Sbjct: 244 LRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAG 303
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
+L +A +F E + VV WNSM++ K ++ ++ M+ + +V T V
Sbjct: 304 GGNLFIARDLFDSAAE--KNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFV 361
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S++ G+ +H+H + Y D +SV L+SMY+K GD++SA +F + R
Sbjct: 362 SIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRR 421
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+SW +MISGY G + ++ F M+ G PD +++++++S C + A+ LGK
Sbjct: 422 NLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAH 481
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
++ N+ + NAL+ YS CG + + +LF +P + +SW T+I+GC NG+
Sbjct: 482 AFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTK 541
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQAC 456
+A+ L H++ + + + VT ++++ C
Sbjct: 542 KAVALLHKMQQEKMELDLVTLISIIPIC 569
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 217/492 (44%), Gaps = 17/492 (3%)
Query: 46 KQNDIEPNNLTFPFIAKACAKLSDL--------IYSQMIHGHIVKSPFVKCDRL---DCA 94
K N P +F + C + +L + M ++V + C L + A
Sbjct: 49 KHNSSNPKVTSFLRLFDLCRNIENLKPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELA 108
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
F+ + V N M+ G E+VL ++ R++G +D T + +A
Sbjct: 109 LSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTAL 168
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
+ + + VH + + ++ + + YAK + A LV I + +V+WN+
Sbjct: 169 GAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQP--DLVTWNA 226
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+++G + + R + G + +V+T S++ + L G+ +H + G
Sbjct: 227 LISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSG 286
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
F D + LISMY+ G++ AR LFD ++ V W +MIS YAQ EA ++F
Sbjct: 287 FSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQ 346
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M A P++VT +S+I C S GK + L + V AL+ MY+K G
Sbjct: 347 QMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLG 406
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ A +FY +P + ++SW +MI+G NG + ++D F + P+ ++ + +L
Sbjct: 407 DLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILS 466
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+ + G A + + ++ L+ + + GKL + Q MP++
Sbjct: 467 ACSKLEAILLGKAAHAFSFRKE---FDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR- 522
Query: 515 DAGIWGTLLCAC 526
+A W TL+ C
Sbjct: 523 NAISWNTLISGC 534
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 191/628 (30%), Positives = 318/628 (50%), Gaps = 45/628 (7%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKACAKLSDLIYSQMIHGH 79
+N I N + + + M+ ND +N P + KACA+ S + +HG
Sbjct: 54 NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113
Query: 80 IVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K+ F KC L A +FD+M RDV SW ML + +
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDA-DVSVCNTWI 183
LRL M+ VG++ V ++ L + + ++VH + + ++G + +VS+ I
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233
Query: 184 SSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
Y K L A+ +F +RL R+VVSW M+AGC + D+ + M+
Sbjct: 234 DMYCKGGCLASAQRLF----DRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLF 289
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T++SL++ L G+ H++ + GF + ++++ LI MY KCG + AR L
Sbjct: 290 PNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARAL 349
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+G+ + W+ +IS YA +D+ LF M P+ VT++S++S C ++GAL
Sbjct: 350 FNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGAL 409
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+LGKW Y GL+ +V++ ALI+MY+KCG + AR LF ++ + W TM+AG
Sbjct: 410 DLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGF 469
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+++G EAL+LF ++ + PN +TF+++ AC+H+G +E
Sbjct: 470 SMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME------------------ 511
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
HY C+ DLLGR G L EA + +++MP++ + IWG LL ACK+H N+ +GE A
Sbjct: 512 ----HYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARK 567
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ +L+P + V +N YA RW+ V ++R M + +KK PG S ++G F +
Sbjct: 568 ILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKS 627
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYS 629
D+ ++ Y ++ + + RE Y+
Sbjct: 628 GDKACTQTTKVYEMVTEMCIKLRESGYT 655
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 138/325 (42%), Gaps = 37/325 (11%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ + S ++ W I + + F +M + + PN +T + C +
Sbjct: 249 FDRLSKRSVVS-WTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGT 307
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + H +++++ F KC ++ A +F+ + +DV W+ ++
Sbjct: 308 LDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISA 367
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+A + ++ V LF M ++ + VT++ L A L L K H++ G++ D
Sbjct: 368 YAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVD 427
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + I+ YAKC D+ +A +F E R + WN+M+AG + ++L + M
Sbjct: 428 VILETALINMYAKCGDVTIARSLF--NEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEM 485
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+G + T VS+ + C + + HYG L+ + + G +
Sbjct: 486 ESHGVEPNDITFVSIFHA--CSHSGLME--------HYG---------CLVDLLGRAGHL 526
Query: 296 DSARVLFDGICDR-TRVSWTAMISG 319
D A + + + R + W A+++
Sbjct: 527 DEAHNIIENMPMRPNTIIWGALLAA 551
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/603 (32%), Positives = 310/603 (51%), Gaps = 31/603 (5%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLF--RQMKQNDIEPNNLTFPFIAKACAKL 67
+RI R+ + W IR N+++ ++ F ++++ E +N+ F + KAC++L
Sbjct: 94 FDRI-RNPDLYSWKVMIRWYF-LNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSEL 151
Query: 68 SDLIYSQMIHGHIVK--SP-----------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ + +H IVK SP + KC ++ + ++FDE+ R+V W +M+V
Sbjct: 152 RETDEGRKLHCQIVKVGSPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIV 211
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G+ Q L+ L LF MR ++ + T+ L A L K VH + I G D
Sbjct: 212 GYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDL 271
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV--VSWNSMVAGCTYGDKFDDSLNFY 232
+ + + Y KC D++ A VF + L T+ VSW +M+ G ++L +
Sbjct: 272 NSFLVTPLLDLYFKCGDIRDAFSVF----DELSTIDLVSWTAMIVGYAQRGYPREALKLF 327
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
+ + T S+LS+ +L GR VH GI G + D + N L+ MY+KC
Sbjct: 328 TDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKC 386
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
I AR +F+ + D+ ++W ++ISGY Q G EAL LF M + PD +T++S++
Sbjct: 387 HMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVL 446
Query: 353 SGCGQSGALELGKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
S C GA +G YA GL +V V AL++ Y+KCG AR +F + EK
Sbjct: 447 SACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNT 506
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
++W+ MI G + G+ +L+LF +++ L PN V F +L AC+H+G L +GW
Sbjct: 507 ITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRY--- 563
Query: 472 QYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ YN P + HY+CM DLL R G+L+EALDF++ +PI+ D + G L C++H
Sbjct: 564 -FNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLH 622
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
++GE + +L P A YV M+N YA GRW + +MK+ + K PG SL
Sbjct: 623 SRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSL 682
Query: 590 FHI 592
I
Sbjct: 683 VDI 685
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 194/377 (51%), Gaps = 7/377 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI--QADFVTVMGLT 148
++CA +FD + D+ SW M+ + +++ FYN RL + D V +
Sbjct: 87 VECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQ-FYNTRLRKCLNEYDNVVFSIVL 145
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
+A + + +H + +G D V + YAKC +++ + VF I + R
Sbjct: 146 KACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILD--RN 202
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
VV W SM+ G D + L + M + T+ SL+++ AL QG+ VH
Sbjct: 203 VVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHG 262
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ I GFDL+ ++ L+ +Y KCGDI A +FD + VSWTAMI GYAQ+G E
Sbjct: 263 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPRE 322
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL+LF LP+ VT S++S C Q+G+L +G+ G +D NAL+D
Sbjct: 323 ALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFE-NALVD 381
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+KC IGDAR +F + +K V++W ++I+G NG EAL+LF Q+ + P+ +T
Sbjct: 382 MYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAIT 441
Query: 449 FLAVLQACTHTGFLEKG 465
++VL AC G G
Sbjct: 442 LVSVLSACASVGAYRVG 458
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 152/318 (47%), Gaps = 10/318 (3%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT--VVSW 212
K +S L+ +H+ + G+ D+ +S Y ++ A L+F +R+R + SW
Sbjct: 50 KTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMF----DRIRNPDLYSW 105
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHG 270
M+ D + + + FY + V S++ C E +GR +H
Sbjct: 106 KVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLK-ACSELRETDEGRKLHCQI 164
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ G D V+ L+ MY+KC +++ +R +FD I DR V WT+MI GY Q L E L
Sbjct: 165 VKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGL 223
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M + T+ S+++ C + GAL GKW Y G N + L+D+Y
Sbjct: 224 VLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLY 283
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KCG I DA +F L +VSWT MI G A G EAL LF DL PN VT
Sbjct: 284 FKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTS 343
Query: 451 AVLQACTHTGFLEKGWAI 468
+VL AC TG L G ++
Sbjct: 344 SVLSACAQTGSLNMGRSV 361
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 321/654 (49%), Gaps = 92/654 (14%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N+ ++ + +N K + +++ M ++++ +N T+P + ++C+ + I H++K
Sbjct: 95 NTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLK 154
Query: 83 SPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
F C L A K+FD +V D+ SWN+ML G+ +G +E +
Sbjct: 155 VGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDV 214
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
+ M + +V N+ I + K
Sbjct: 215 YDRMP---------------------------------------ERNVIASNSMIVLFGK 235
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
+++ A +F E + + +VSW+++++ + ++++L ++ M NG +D V+
Sbjct: 236 KGNVEEACKLFN--EMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVL 293
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS------------------ 290
S+LS+ ++ G+LVH + G + V++ N LI MYS
Sbjct: 294 SVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCL 353
Query: 291 -------------KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
KCG+I+ AR LFD + D+ VSW+AMISGYAQ+ E L LF M+
Sbjct: 354 DQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQ 413
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G PD ++S+IS C AL+ GKW Y GLK N+++ LI+MY K G +
Sbjct: 414 IEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVE 473
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
DA E+F L EK V +W +I G A+NG ++L F ++ E + PN +TF+AVL AC
Sbjct: 474 DALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACR 533
Query: 458 HTGFLEKGWA--ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
H G +++G S+IQ G P + HY CM DLLGR G LKEA + ++SMP+ D
Sbjct: 534 HMGLVDEGHRHFNSMIQEHKIG----PNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPD 589
Query: 516 AGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTM 575
WG LL ACK + + E GE + L +L P V ++N YA G W V +R M
Sbjct: 590 VSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGM 649
Query: 576 MKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
M+++ V K PG S+ +G+ F A D+ H ++E +LD +A + E Y+
Sbjct: 650 MRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYA 703
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%)
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+I+ + +F I + M+ GY Q+ +A+ ++ M + D T +
Sbjct: 75 NINQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ 134
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C A GK ++ G +V + N LI+MY+ CG++ DAR++F +VS
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVS 194
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDL 442
W +M+AG L G EA D++ ++ E ++
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNV 223
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 321/618 (51%), Gaps = 46/618 (7%)
Query: 49 DIEPNNLTFPFIAKACAKLSDL-----IYSQM---------IHGHIVKSPF--------- 85
D+ + AK C + DL ++ +M +HGH +K+ F
Sbjct: 192 DVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTA 251
Query: 86 -----VKCDRL-DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
+KC+ L DC+ ++F+ + ++ S+NA++VG+A+ L +F ++ G+
Sbjct: 252 TLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGL 311
Query: 140 DFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D V++ G +A A+ L L+ VH + +++ V N + Y KC L A LV
Sbjct: 312 DEVSLSGAXRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 370
Query: 199 FCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F EE + R VSWN+++A + +L+ + M+ +G D T S+L +
Sbjct: 371 F---EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGW 427
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL G +H+ I LD V LI MYSKCG ++ A L D + ++T VSW A+I
Sbjct: 428 QALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAII 487
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SG++ + +EA + F M G PD T +++ C +ELGK L+
Sbjct: 488 SGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 547
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ + + L+DMYSKCG++ D + +F P + V+W M+ G A +G EAL +F +
Sbjct: 548 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM 607
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+++PN TFLAVL+AC H G +EKG + G+ +P+L+HYSC+ D++GR
Sbjct: 608 QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGL--DPQLEHYSCVVDIMGRS 665
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G++ +AL+ ++ MP ++DA IW TLL CKIH N+E+ E AY + +LEP +A YV ++
Sbjct: 666 GQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLS 725
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N YA G W+ V +R MM+ N +KK PG S I + F D+ H S+ Y LD
Sbjct: 726 NIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLD 785
Query: 618 CLALHSREEAYSSHLKWI 635
L + +KW+
Sbjct: 786 VL---------TDEMKWV 794
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/557 (25%), Positives = 235/557 (42%), Gaps = 89/557 (15%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEM 101
TF I + C+ L + H ++ + F +KC L A+K+FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA----DFV-----TVMGLTQAAI 152
RD SWNAML G+A G + +LF M G DF TV T A+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 153 HAKHLSLLK------SVHSFGIHIGVDADVSVCNTWISSYAKC----DDLKMAELVFCGI 202
K S L+ +H + +G D DV + + YAKC DDL+ +F +
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 203 EE-----------RLRT-------------------------------------VVSWNS 214
++ L+T + S+N+
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++ G DK ++L +R + +G LD ++ + + ++G VH +
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
++ V N ++ MY KCG + A ++F+ + R VSW A+I+ + Q G+ ++ L LF
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M +G PD T S++ C AL G N + + V ALIDMYSKCG
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCG 463
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ A +L L E+ VVSW +I+G +L + EA F +++E+ + P+ T+ +L
Sbjct: 464 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 523
Query: 455 ACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
C + +E G I II+ + + +Y S + D+ + G +++ + P
Sbjct: 524 TCANLVTVELGKQIHAQIIKKELQSDAYIS-----STLVDMYSKCGNMQDFQLIFEKAPN 578
Query: 513 KSDAGIWGTLLCACKIH 529
+ D W ++C H
Sbjct: 579 R-DFVTWNAMVCGYAQH 594
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 222/460 (48%), Gaps = 21/460 (4%)
Query: 1 MAVSSLPPRLNRIYRS---STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTF 57
M ++L N+++ S + +N+ I ++ + L +FR ++++ + + ++
Sbjct: 257 MKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 316
Query: 58 PFIAKACAKLSDLIYSQMIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAV 103
+ACA + + +HG +KS + KC L A +F+EM
Sbjct: 317 SGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 376
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
RD SWNA++ Q G E L LF M G++ D T + +A + L+ +
Sbjct: 377 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEI 436
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H+ I + D V I Y+KC ++ AE + + E +TVVSWN++++G +
Sbjct: 437 HNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAE--QTVVSWNAIISGFSLQK 494
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
+ +++ + M+ G D T ++L + + G+ +H+ I D + +
Sbjct: 495 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 554
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
TL+ MYSKCG++ +++F+ +R V+W AM+ GYAQ G +EAL++F M+ P
Sbjct: 555 TLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKP 614
Query: 344 DLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
+ T L+++ CG G +E G +F + + GL + + ++D+ + G + A EL
Sbjct: 615 NHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL 674
Query: 403 FYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+P E V W T+++ C ++G A + +++L+
Sbjct: 675 IEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLE 714
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 130/349 (37%), Gaps = 81/349 (23%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL G+ H+ I F V V N LI MY KC D+ A +FDG+ R VSW AM+
Sbjct: 56 KALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAML 115
Query: 318 SGYAQKGDLDEALRLFFAMEAAG----ELPDL-----------VTVLSMISGCGQSGALE 362
GYA +GD+ A +LF AM G EL D T ++ C
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHG 175
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD----ARELFYAL------------ 406
G A G +V+ +AL+DMY+KC D ELF +
Sbjct: 176 GGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHG 235
Query: 407 --------------------------------------PEKIVVSWTTMIAGCALNGEFV 428
P + S+ +I G A + + +
Sbjct: 236 HALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGI 295
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS 488
EAL +F L + L + V+ +AC +G + G+S
Sbjct: 296 EALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQV-------HGLSMKSLCQSNI 348
Query: 489 CMA----DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
C+A D+ G+ G L EA + M + DA W ++ A + + N E
Sbjct: 349 CVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEE 396
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 212/674 (31%), Positives = 336/674 (49%), Gaps = 58/674 (8%)
Query: 16 SSTINQWNSQIR---EAVNKNEAHKT-LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
SS+ N + S ++ E+ N+ +A K L+ + +KQ P + A KL +L
Sbjct: 2 SSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQ----PETFLSNNLITAYYKLGNLA 57
Query: 72 YSQMIHGHI----------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
Y+ + HI + S + K L +IF+ M RD SWN + G+A G
Sbjct: 58 YAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGS 117
Query: 122 LENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV-- 178
+ +R++ M + + + +T + + + L + ++ + G +DV V
Sbjct: 118 CSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGS 177
Query: 179 -----------------------------CNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
CNT I+ +C ++ ++ +FCG++E R
Sbjct: 178 PLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKE--RDS 235
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+SW M+ G ++L+ +R M GF +D T S+L++ AL +G+ +H++
Sbjct: 236 ISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAY 295
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I +V V + L+ MYSKC I SA +F + + +SWTAM+ GY Q G +EA
Sbjct: 296 VIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEA 355
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+++FF M+ G PD T+ S+IS C +LE G F A GL + V NALI +
Sbjct: 356 VKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITL 415
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KCGS ++ LF + + VSWT ++AG A G+ E + LF +++ L+P+ VTF
Sbjct: 416 YGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTF 475
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+ VL AC+ G +EKG + GI P +DH +C+ DLLGR G+L+EA +F+ +
Sbjct: 476 IGVLSACSRAGLVEKGLQYFESMIKEHGIM--PIVDHCTCIIDLLGRAGRLEEARNFINN 533
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
MP D W TLL +C++H ++EIG++ A L LEP + A YV +++ YA G+WD V
Sbjct: 534 MPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKV 593
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY- 628
A +R M+ +V+K PG S GK F+A+D+ Y L+ L EE Y
Sbjct: 594 AQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYV 653
Query: 629 ---SSHLKWIPEHE 639
SS L + E E
Sbjct: 654 PDMSSVLHDVEESE 667
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/591 (32%), Positives = 301/591 (50%), Gaps = 29/591 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W IR +E + + +M+ E +N+ F + KAC++ + + +H IV
Sbjct: 71 WKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIV 130
Query: 82 K--SP-----------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
K +P + KC ++C+ +FDE R+V SW++M+ G+ Q ++ L L
Sbjct: 131 KFGNPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVL 190
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F MR I+A+ +T+ L A L K +H + I G++ + + YAK
Sbjct: 191 FNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAK 250
Query: 189 CDDLKMAELVF---CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
C ++ A VF GI+ +VSW +M+ G T +++L + +
Sbjct: 251 CGVVRDARSVFDELHGID-----IVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDV 305
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ S+ SS L GR +H I G D V N+L+ Y+KC AR +F+ I
Sbjct: 306 TIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETI 364
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
DR V+W ++IS ++Q G EAL LF M LPD VT++S++S C AL++G
Sbjct: 365 SDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGS 424
Query: 366 WFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
F YA GL NV V AL+ Y+KCG AR +F + +K V+W+ MI+G +
Sbjct: 425 SFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQ 484
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--P 482
G +L +F +++ +L+PN F ++L AC+HTG + +GW + + D YN P
Sbjct: 485 GNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQD----YNLVP 540
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
HY+CM DLL R G+LKEALDF+Q MP++ D ++G L C +H ++GE +
Sbjct: 541 STKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRM 600
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+L P A YV M N YA RW V +R +MK+ + K PG SL ++
Sbjct: 601 LELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMD 651
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 193/377 (51%), Gaps = 6/377 (1%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
RLD A +FD + D SW ++ + +++ + MR+ + D V + +
Sbjct: 52 RLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLK 111
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL-RT 208
A +++ + VH + G + D V + YAKC +++ + VF +E L R
Sbjct: 112 ACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVF---DENLDRN 167
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
V SW+SM+AG + D L + M + T+ L+ + AL QG+ +H
Sbjct: 168 VFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHG 227
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ I G +L ++ L+ +Y+KCG + AR +FD + VSWTAMI GY Q G +E
Sbjct: 228 YLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEE 287
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL+LF E LP+ VT+ S+ S C Q L LG+ + G +D + V N+L+D
Sbjct: 288 ALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPI-VTNSLVD 346
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
Y+KC DAR +F + ++ VV+W ++I+ + NG EAL+LFHQ+ + P+ VT
Sbjct: 347 FYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVT 406
Query: 449 FLAVLQACTHTGFLEKG 465
++VL AC L+ G
Sbjct: 407 LVSVLSACASLNALQVG 423
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 3/313 (0%)
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+++ L +H++ + G+ D+S +S Y L +A LVF I +SW +
Sbjct: 17 NINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHP--DFLSWKVI 74
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+ +F D + FY M D +L + +GR VH + +G
Sbjct: 75 IRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG- 133
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+ D V L+ MY+KCG+I+ +R +FD DR SW++MI+GY Q + L LF
Sbjct: 134 NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNR 193
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M + +T+ ++ C + GAL GKW Y G++ + AL+D+Y+KCG
Sbjct: 194 MREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGV 253
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ DAR +F L +VSWT MI G NG EAL LF Q ++ + PN VT +V +
Sbjct: 254 VRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSS 313
Query: 456 CTHTGFLEKGWAI 468
C+ L G +I
Sbjct: 314 CSQLLNLNLGRSI 326
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 159/366 (43%), Gaps = 59/366 (16%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W + I + L LF Q +Q + PN++T + +C++L +L + IHG
Sbjct: 269 IVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHG 328
Query: 79 HIVK----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+K P V KC A +F+ ++ RDV +WN+++ F+Q G
Sbjct: 329 LSIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEA 388
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWIS 184
L LF+ MR+ + D VT++ + A L + S H++ + G + ++V V ++
Sbjct: 389 LELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLT 448
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC D + A ++F G+++ ++ V+W++M++G YG + NG R +
Sbjct: 449 FYAKCGDAESARVIFDGMDQ--KSTVTWSAMISG--YG------------IQGNG-RGSL 491
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ +L + + P + +++S S G I LF
Sbjct: 492 SIFGDMLKAELKPNE--------------------EIFTSILSACSHTGMIGEGWRLFTM 531
Query: 305 ICDRTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
IC + +T M+ A+ G L EAL M PD+ + + GCG
Sbjct: 532 ICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQ---PDVSLFGAFLHGCGLHS 588
Query: 360 ALELGK 365
+LG+
Sbjct: 589 RFDLGE 594
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 191/614 (31%), Positives = 307/614 (50%), Gaps = 66/614 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ +R + ++ L ++ +M PN+ +FPF+ K+CAK + IH ++
Sbjct: 32 WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVL 91
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
K L C D +++ +A+ G LE+ ++F
Sbjct: 92 K--------LGCGL---------DRYVHTSLISMYARNGGLEDARKVF------------ 122
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
A+ H DV C I+ YA D + A VF
Sbjct: 123 -------DASSHR--------------------DVVSCTALITGYASRGDFRSARKVFDE 155
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
I ER VVSWN+M+ G +++++L ++ MM R D T+VS++S+ ++
Sbjct: 156 ITER--DVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIE 213
Query: 262 QGRLVHS----HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
GR VHS +GF + ++N LI +YSKCGD+++A LF+G+ + VSW +I
Sbjct: 214 LGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLI 273
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG--G 375
GY EAL LF M +GE P+ VT+LS++ C GA+++G+W Y G
Sbjct: 274 GGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKG 333
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+ + + +LIDMY+KCG I A ++F ++ + + SW MI G A++G A DLF
Sbjct: 334 VTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFS 393
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
++ + P+ +TF+ +L AC+H+G L+ G I D ++ P+L+HY CM DLLG
Sbjct: 394 RMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLT--PKLEHYGCMIDLLG 451
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
G KEA + + +MP++ D IW +LL ACK H N+E+ E A L K+EP ++ YV
Sbjct: 452 HSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVL 511
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
++N YA GRW+ VA +R ++ +KK PG S ++ F D+ H Y +
Sbjct: 512 LSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHM 571
Query: 616 LDCLALHSREEAYS 629
L+ + + E ++
Sbjct: 572 LEEMDVQLEEAGFA 585
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 178/376 (47%), Gaps = 41/376 (10%)
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
D L A VF I+E ++ WN+M+ G +L Y M+ G + +
Sbjct: 12 DGLPYAISVFETIQEP--NLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPF 69
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL S +A +GR +H+ + G LD V +LISMY++ G ++ AR +FD R
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129
Query: 310 RVSWTAMISGYAQKGDL-------------------------------DEALRLFFAMEA 338
VS TA+I+GYA +GD +EAL LF M
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 339 AGELPDLVTVLSMISGCGQSGALELGK----WFDNYACSGGLKDNVMVCNALIDMYSKCG 394
PD T++S++S C QSG++ELG+ W D+ G ++ + NALID+YSKCG
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ A LF L K VVSW T+I G + EAL LF +++ PN VT L+VL
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309
Query: 455 ACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H G ++ G W I KG++ L + + D+ + G ++ A SM +
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSL--RTSLIDMYAKCGDIEAAHQVFNSMLYR 367
Query: 514 SDAGIWGTLLCACKIH 529
S + W ++ +H
Sbjct: 368 SLSS-WNAMIFGFAMH 382
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/595 (33%), Positives = 306/595 (51%), Gaps = 28/595 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ----NDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
W + + V E K + QM + + PN+ T +AC L +L + +H
Sbjct: 185 WTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLH 244
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G+ VK S + KCD + A +F E+ +DV SW ++ + + G
Sbjct: 245 GYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAR 304
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M G+Q D V V + + +++ K+ H+ I V + N+ I
Sbjct: 305 EAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLI 364
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM---YNGF 240
S Y K + + +A VF + +R SW+ MVAG L YR M ++ F
Sbjct: 365 SMYGKFELVDVAGTVFGMLHQRDDE--SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEF 422
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D+T++VS +SS L G+ VH + I D + S+ N+LI MY +CG+ + A
Sbjct: 423 LCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLD-ENSITNSLIGMYGRCGNFELACK 481
Query: 301 LFD-GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F R V+W A+IS Y+ G ++AL L+ M P+ T++++IS C
Sbjct: 482 IFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLA 541
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
ALE G+ +Y + GL+ +V + AL+DMY+KCG +G AR +F ++ ++ VV+W MI+
Sbjct: 542 ALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMIS 601
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G ++GE +AL LF ++ ++PN +TFLA+L AC H G +++G + I G
Sbjct: 602 GYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLFIRM---GGYR 658
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P L HY+CM DLLG+ G L+EA D V +MPIK D G+WGTLL ACK+H N E+G VA
Sbjct: 659 LEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNFEMGLRVA 718
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
F +P + Y+ M+N Y +WD + +R MK V+K G S + G
Sbjct: 719 KKAFSSDPRNDGYYILMSNSYGSAEKWDEIEKLRDTMKNYGVEKGVGWSAVDVWG 773
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 245/533 (45%), Gaps = 32/533 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS +R ++ L R+M+ + P+ T P A A A+L+ L +H + V
Sbjct: 81 WNSLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSV 140
Query: 82 KSP-----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL-E 123
K + +C L A K+FDEM RDV +W A++ G + G +
Sbjct: 141 KFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGK 200
Query: 124 NVLRLFYNMRLV---GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ L +RL G + + T+ +A LS + +H + + G+ V +
Sbjct: 201 GICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVS 260
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
S Y+KCD + A ++F + E + VVSW ++ +++ ++ M +G
Sbjct: 261 ALFSMYSKCDMTEDACILFPELTE--KDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGL 318
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D V +LS + +G+ H+ I F V + N+LISMY K +D A
Sbjct: 319 QPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGT 378
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE---LPDLVTVLSMISGCGQ 357
+F + R SW+ M++GY + G + L L+ M+ L D+ +++S IS C +
Sbjct: 379 VFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSR 438
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKIVVSWTT 416
G L LG+ Y+ L +N + N+LI MY +CG+ A ++F A + VV+W
Sbjct: 439 LGRLRLGQSVHCYSIKCLLDEN-SITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNA 497
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
+I+ + G +AL L+ Q++ D++PN T + V+ AC + LE G ++ K
Sbjct: 498 LISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHG---ELLHSYVK 554
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ ++ + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 555 NMGLESDVSISTALVDMYTKCGQLGTARGIFDSM-LQRDVVTWNVMISGYGMH 606
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 7/216 (3%)
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
P L+ +H+ G L+S YS G A + F W ++
Sbjct: 25 PPPLIALLRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSL 84
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
+ + D D AL M A+G P T S + AL +G +Y+ GL
Sbjct: 85 LRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGL 144
Query: 377 ---KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
+V V ++L+ MY++CGS+GDA +LF + E+ VV+WT +++GC NGE + +
Sbjct: 145 LAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICY 204
Query: 434 FHQLMEL----DLRPNRVTFLAVLQACTHTGFLEKG 465
Q++ L RPN T + L+AC G L G
Sbjct: 205 LVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAG 240
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 299/574 (52%), Gaps = 23/574 (4%)
Query: 71 IYSQMIHGHIVKSP---------FVKCDRLDCAYKIF-DEMAVRDVASWNAMLVGFAQMG 120
I+S M+ + SP + KC++++ A IF D +V ++NA++ GF G
Sbjct: 59 IHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNG 118
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
F E + MR G+ D T +A + + K +H G++ DV + +
Sbjct: 119 FPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGS 175
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ Y K ++ A++ F E +R VV WN+MV G +F+ L +R M
Sbjct: 176 ALVNCYLKFGLMEHAQVAF--EELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESV 233
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
TV +LS F L GR++H + G+D V+V N+LI MY KC I+ A
Sbjct: 234 VPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALE 293
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + ++ SW +++S + Q GD D LRL M AG PDLVTV +++ C A
Sbjct: 294 IFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAA 353
Query: 361 LELGKWFDNYACSGGLK------DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
L G+ Y GL D+V++ NA+IDMY+KCGS+ DA +F + K V SW
Sbjct: 354 LMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASW 413
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
MI G ++G EAL++F ++ E+ L+P+ VTF+ VL AC+H GF+ +G ++Q
Sbjct: 414 NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNF-LVQMK 472
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
K P ++HY+C+ D+LGR G+L EA + +MPI+++ +W LL AC++H + +
Sbjct: 473 SK-YDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVL 531
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
E A +F+LEP YV M+N Y GR++ V +R M++ V+K PG S +
Sbjct: 532 AEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKN 591
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F + DR H E+ Y L+ L RE Y
Sbjct: 592 GVHVFVSADRAHPEAHSIYAGLNSLTARLREHGY 625
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 210/446 (47%), Gaps = 35/446 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I + + +++M+ + P+ TFP KAC D++ + IHG +
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLF 163
Query: 82 K-----SPFVKCDRLDCAYKI---------FDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F+ ++C K F+E+ +RDV WNAM+ G+AQ+G E VL
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 223
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + TV G+ L+ + +H F + +G D+ V+V N+ I Y
Sbjct: 224 TFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F + E + + SWNS+V+ D +L M+ G + D+ TV
Sbjct: 284 KCKCIEDALEIFEMMRE--KDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGF-----DL-DVSVINTLISMYSKCGDIDSARVL 301
++L + AL+ GR +H + I G D+ DV + N +I MY+KCG + A ++
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + ++ SW MI GY G +EAL +F M PD VT + ++S C +G +
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 461
Query: 362 ELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWT 415
G+ F Y + ++ V IDM + G + +A EL +P E V W
Sbjct: 462 SQGRNFLVQMKSKYDVAPTIEHYTCV----IDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 416 TMIAGCALNGEFVEALDLFHQLMELD 441
++A C L+ V A ++ EL+
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELE 543
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 21/415 (5%)
Query: 128 LFYNMRLV--GIQA-----DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
LF+N + IQ+ + T + QA+ H K+LS K +HS+ + G
Sbjct: 17 LFFNFSSISTAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSIT 76
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I+ Y+KC+ + A +F + V ++N++++G ++ FY+ M G
Sbjct: 77 SLINMYSKCNQMNFALSIFSDPTHEI-NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGV 135
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D T + + C + L + + +H +G +LDV + + L++ Y K G ++ A+V
Sbjct: 136 IPDKFTFPCAIKA--CLDVL-EIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQV 192
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F+ + R V W AM++GYAQ G + L F M +P TV ++S G
Sbjct: 193 AFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGD 252
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L G+ +A G V V N+LIDMY KC I DA E+F + EK + SW ++++
Sbjct: 253 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSV 312
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI------SIIQYD 474
G+ L L +++ ++P+ VT VL AC+H L G I S + D
Sbjct: 313 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 372
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
K I ++ + + D+ + G +++A + M K D W ++ +H
Sbjct: 373 GKDID---DVLLKNAVIDMYAKCGSMRDAHLVFERMSNK-DVASWNIMIMGYGMH 423
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R I WNS + + TL L +M I+P+ +T + AC+ L+ L++ +
Sbjct: 299 REKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGR 358
Query: 75 MIHGHIVKSP--------------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
IHG+++ S + KC + A+ +F+ M+ +DVASWN M++
Sbjct: 359 EIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM 418
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
G+ G+ L +F M V ++ D VT +G+ A HA +S
Sbjct: 419 GYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 462
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 306/599 (51%), Gaps = 23/599 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I + + LF +M ++ PN ++ + CA L D + + IH ++
Sbjct: 76 WNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYV 135
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK+ + KC + + ++FDE++ R+ SWNA++ A + ++ L
Sbjct: 136 VKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDAL 195
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M G++ + VT + + K K +H F + G+++D+ V N I Y
Sbjct: 196 EMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMY 255
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK A VF I E+ +VSWN+MVA +++ R M +G + T
Sbjct: 256 AKSGRSLQASNVFNQIGEK--NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVT 313
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
++L + L G+ +H+ I G +D+ V N L MY+KCG ++ AR +F I
Sbjct: 314 FTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-IS 372
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R VS+ +I GY+Q + E+LRLF M G D+V+ + +IS C AL+ GK
Sbjct: 373 LRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKE 432
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
A L ++ + NAL+D Y KCG I A ++F +P + SW +MI G + GE
Sbjct: 433 VHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGE 492
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYDDKGISYNPELD 485
A++LF + E + + V+++AVL AC+H G +E+G +Q + P
Sbjct: 493 LTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQN----IKPTQM 548
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLLGR G ++EA+ ++S+PI+ DA +WG LL AC+IH IE+ + A LFKL
Sbjct: 549 HYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKL 608
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
+P + Y ++N YA G+WD +R +MK KK PG S I+ + F A +R
Sbjct: 609 KPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 213/425 (50%), Gaps = 18/425 (4%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEM 101
TFPF+ KACA + + IHG + K F C L ++FDEM
Sbjct: 9 TFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEM 68
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLL 160
RDV SWN+++ F+ GF + LF M L G + + V+++ + +
Sbjct: 69 LERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTG 128
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+ +H + + G+D+ V+V N + Y KC +K + VF I ER VSWN+++
Sbjct: 129 RQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISER--NGVSWNAIITSLA 186
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
Y ++ D+L +R M+ G + + T S+L V + G+ +H + +G + D+
Sbjct: 187 YLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIF 246
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V N LI MY+K G A +F+ I ++ VSW AM++ +AQ A+ L M+A G
Sbjct: 247 VANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADG 306
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
E+P+ VT +++ C + G L GK A G ++ V NAL DMY+KCG + AR
Sbjct: 307 EIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLAR 366
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F + + VS+ +I G + E+L LF ++ ++ + V+++ V+ AC +
Sbjct: 367 RVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLA 425
Query: 461 FLEKG 465
L++G
Sbjct: 426 ALKQG 430
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 162/309 (52%), Gaps = 3/309 (0%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+ +H +G D+DV V NT + Y C LK + VF + ER VVSWNS++ +
Sbjct: 27 REIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLER--DVVSWNSVIGVFS 84
Query: 221 YGDKFDDSLNFYRHM-MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ ++++ + M + +GFR ++ ++VS+L E V GR +H + + G D V
Sbjct: 85 VHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQV 144
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+V N L+ +Y KCG + +R +FD I +R VSW A+I+ A +AL +F M
Sbjct: 145 TVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDG 204
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G P+ VT SM+ + + GK ++ GL+ ++ V NALIDMY+K G A
Sbjct: 205 GVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQA 264
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F + EK +VSW M+A A N + A+DL Q+ PN VTF VL AC
Sbjct: 265 SNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARI 324
Query: 460 GFLEKGWAI 468
GFL G I
Sbjct: 325 GFLRPGKEI 333
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 153/363 (42%), Gaps = 51/363 (14%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WN+ + + L RQM+ + PN++TF + ACA++ L + IH
Sbjct: 275 NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIH 334
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+++ + KC L+ A ++F ++++RD S+N +++G++Q
Sbjct: 335 ARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCS 393
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LRLF M + G++ D V+ MG+ A + L K VH + + + + N +
Sbjct: 394 ESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALL 453
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y KC + +A VF I R SWNSM+ G + ++N + M +G D
Sbjct: 454 DFYIKCGRIDLAGKVFRQIPS--RDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYD 511
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ +++LS A G LV G Y + V I
Sbjct: 512 SVSYIAVLS------ACSHGGLVE-EGKKYFEHMQVQNIKP------------------- 545
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
T++ + M+ + G ++EA++L +E+ PD +++ C G +EL
Sbjct: 546 -----TQMHYACMVDLLGRAGLIEEAVKL---IESLPIEPDANVWGALLGACRIHGYIEL 597
Query: 364 GKW 366
W
Sbjct: 598 AHW 600
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 281/549 (51%), Gaps = 4/549 (0%)
Query: 80 IVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
IV S + L A +F + V +W +++ F L F MR G
Sbjct: 44 IVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCP 103
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D + ++ L +SVH F + +G+D D+ N ++ Y+K + VF
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF 163
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ + VVS+N+++AG ++D+L R M + + D T+ S+L F
Sbjct: 164 ELMPRK--DVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVD 221
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+++G+ +H + I G D DV + ++L+ MY+K I+ + +F + R +SW ++++G
Sbjct: 222 VLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAG 281
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y Q G +EALRLF M +A P V S+I C L LGK Y GG N
Sbjct: 282 YVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRN 341
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ + +AL+DMYSKCG+I AR++F + VSWT +I G AL+G EA+ LF ++
Sbjct: 342 IFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 401
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
++PN+V F+AVL AC+H G +++ W K N EL+HY+ +ADLLGR GK
Sbjct: 402 QGVKPNQVAFVAVLTACSHVGLVDEAWG--YFNSMTKVYGLNQELEHYAAVADLLGRAGK 459
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L+EA DF+ M ++ +W TLL +C +H N+E+ E VA +F ++ + YV M N
Sbjct: 460 LEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNM 519
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
YA GRW +A +R +++ ++K P S + KT F + DR H + L +
Sbjct: 520 YASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAV 579
Query: 620 ALHSREEAY 628
+E Y
Sbjct: 580 MEQMEKEGY 588
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 225/448 (50%), Gaps = 22/448 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
+ S + W S IR +++ + L F +M+ + P++ FP + K+C + DL
Sbjct: 63 KTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 72 YSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ + +HG IV+ + + K +D K+F+ M +DV S+N ++ G+A
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYA 182
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDAD 175
Q G E+ LR+ M ++ D T+ + I ++++ +L K +H + I G+D+D
Sbjct: 183 QSGMYEDALRMVREMGTSDLKPDAFTLSSVL--PIFSEYVDVLKGKEIHGYVIRKGIDSD 240
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + ++ + YAK ++ +E VF + R +SWNS+VAG +++++L +R M
Sbjct: 241 VYIGSSLVDMYAKSARIEDSERVFSHLYR--RDSISWNSLVAGYVQNGRYNEALRLFRQM 298
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ R S++ + L G+ +H + + GF ++ + + L+ MYSKCG+I
Sbjct: 299 VSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNI 358
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+AR +FD + VSWTA+I G+A G EA+ LF M+ G P+ V +++++ C
Sbjct: 359 QAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 418
Query: 356 GQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVS 413
G + E +F++ GL + A+ D+ + G + +A + + E
Sbjct: 419 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSV 478
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELD 441
W+T+++ C+++ A + ++ +D
Sbjct: 479 WSTLLSSCSVHKNLELAEKVAEKIFTID 506
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 313/618 (50%), Gaps = 28/618 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + + K L LF +MK+ + + + T + K CA L +++H +
Sbjct: 19 WNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALAL 78
Query: 82 KS-----PFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S F+ C +D A K+F ++ DV +W+AM+ G Q G +
Sbjct: 79 RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAE 138
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ MR G + + T+ L A + L +S+H G ++D V N I Y
Sbjct: 139 LFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYM 198
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K ++ VF + +VSWN++++G + M+ GF+ ++ T
Sbjct: 199 KSRCVEDGNKVFEAMTNP--DLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTF 256
Query: 248 VSLL---SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+S+L SS + PE G+ VH+H I D D V L+ MY+K ++ A V FD
Sbjct: 257 ISVLRSCSSLLDPEF---GKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDR 313
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +R SWT +ISGYAQ ++A++ F M+ G P+ T+ S +SGC LE G
Sbjct: 314 LVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENG 373
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ A G ++ V +AL+D+Y KCG + A +F L + +VSW T+I+G + +
Sbjct: 374 RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQH 433
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NP 482
G+ +AL+ F ++ + P+ TF+ VL AC+ G +E+G ++D Y NP
Sbjct: 434 GQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK----RFDSMSKIYGINP 489
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
++HY+CM D+LGR GK E F++ M + + IW T+L ACK+H N++ GE A L
Sbjct: 490 SIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKL 549
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
F++EP + Y+ ++N +A GRWD V NIR +M +KK PG S ++G+ F ++
Sbjct: 550 FEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQ 609
Query: 603 DRYHAESELTYPVLDCLA 620
D H + Y LD L
Sbjct: 610 DGSHPKIREIYAKLDKLG 627
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 195/431 (45%), Gaps = 26/431 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R+ + W++ I + + LF M++ PN T + + DL Y Q
Sbjct: 113 RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG I K F +K ++ K+F+ M D+ SWNA+L GF
Sbjct: 173 SIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQ 232
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
R+FY M L G + + T + + ++ K VH+ I D D V
Sbjct: 233 TCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGT 292
Query: 181 TWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ YAK L+ A + F +RL R + SW +++G D+ + ++ ++R M
Sbjct: 293 ALVDMYAKARCLEDAGVAF----DRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQRE 348
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + + T+ S LS L GR +H+ + G D+ V + L+ +Y KCG ++ A
Sbjct: 349 GIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHA 408
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F G+ R VSW +ISGY+Q G ++AL F M + G +PD T + ++S C
Sbjct: 409 EAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFM 468
Query: 359 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR---ELFYALPEKIVVSW 414
G +E G K FD+ + G+ ++ ++D+ + G + + E P ++ W
Sbjct: 469 GLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLI--W 526
Query: 415 TTMIAGCALNG 425
T++ C L+G
Sbjct: 527 ETVLGACKLHG 537
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 202/439 (46%), Gaps = 6/439 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
++ A ++F M ++ SWNA+L G+AQ+G + VL+LF M+ + T+ + +
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ L K +H+ + G + D + + + Y+KC + A VF I R VV
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI--RNPDVV 118
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+W++M+ G ++ + M G R + T+ SL+S+ L G+ +H
Sbjct: 119 AWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCI 178
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
YGF+ D V N LI MY K ++ +F+ + + VSW A++SG+
Sbjct: 179 CKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGP 238
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
R+F+ M G P++ T +S++ C E GK + D+ V AL+DMY
Sbjct: 239 RIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMY 298
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
+K + DA F L + + SWT +I+G A + +A+ F Q+ ++PN T
Sbjct: 299 AKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLA 358
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
+ L C+H LE G + + + ++ S + DL G+ G ++ A + +
Sbjct: 359 SCLSGCSHMATLENGRQLHAVAVK---AGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Query: 511 PIKSDAGIWGTLLCACKIH 529
I D W T++ H
Sbjct: 416 -ISRDIVSWNTIISGYSQH 433
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 279/523 (53%), Gaps = 22/523 (4%)
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L + MR + I+ D + + +A + K +H F + G+ +DV V N +
Sbjct: 94 LNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQM 153
Query: 186 YAKCDDLKMAELVFCGIEER--------------------LRTVVSWNSMVAGCTYGDKF 225
Y++C L A L+F + ER R++VSW +M+AG +
Sbjct: 154 YSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDL 213
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
++ + M+ + T++SL+ S A+ G+ +H++ + GF + +++ L
Sbjct: 214 EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATAL 273
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+ MY KCG+I SAR +FD + ++ ++WTAMIS YAQ +D A +LF M G P+
Sbjct: 274 VDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNE 333
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T++S++S C +GAL++GKWF Y G++ +V++ ALIDMY+KCG I A+ LF
Sbjct: 334 LTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE 393
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
++ + +W M+AG ++G +AL LF ++ L ++PN +TF+ L AC+H G + +G
Sbjct: 394 AIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEG 453
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ D G+ P+++HY CM DLLGR G L EA ++SMP+ + IWG +L A
Sbjct: 454 KGLFEKMIHDFGLV--PKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
CKIH N +GE A L LEP + V M+N YA RW+ VA +R +K +KK P
Sbjct: 512 CKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEP 571
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S +NG F D H E +L ++ +E Y
Sbjct: 572 GMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGY 614
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 207/447 (46%), Gaps = 42/447 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLL--FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
T +N + + + E+H L + M++ DIE ++ P + KAC+++S +
Sbjct: 71 TRTHFNHAQQVSFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKE 130
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWN----------- 110
IHG VK+ V +C L A +FD+M+ RDV SW+
Sbjct: 131 IHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFY 190
Query: 111 -----------AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
AM+ G+ + LE RLF M + + +T++ L + + L
Sbjct: 191 GFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQL 250
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
K +H++ + G +++ + Y KC +++ A +F ++ + V++W +M++
Sbjct: 251 GKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKN--KDVMTWTAMISAY 308
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ D + + M NG R + T+VSLLS AL G+ H++ G ++DV
Sbjct: 309 AQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDV 368
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+ LI MY+KCGDI A+ LF DR +W M++GY G ++AL+LF ME
Sbjct: 369 ILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETL 428
Query: 340 GELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G P+ +T + + C +G + GK F+ GL V ++D+ + G + +
Sbjct: 429 GVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDE 488
Query: 399 ARELFYALP-EKIVVSWTTMIAGCALN 424
A ++ ++P + W M+A C ++
Sbjct: 489 AYKMIESMPVTPNIAIWGAMLAACKIH 515
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 158/330 (47%), Gaps = 38/330 (11%)
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+LN Y +M +D + S+L + G+ +H + G DV V+N L+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 288 MYSKCGDIDSARVLFD----------------------GICDRTRVSWTAMISGYAQKGD 325
MYS+CG + SAR+LFD G R+ VSWTAMI+GY + D
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
L+E RLF M P+ +T+LS+I CG GA++LGK Y G ++ + A
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY KCG I AR +F ++ K V++WT MI+ A A LF Q+ + +RPN
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 446 RVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPEL-----DHYSCMADLLGRKGK 499
+T +++L C G L+ G W + I D +G+ + L D Y+ D+ G +
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYI--DKQGVEVDVILKTALIDMYAKCGDISGAQRL 390
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
EA+D D W ++ +H
Sbjct: 391 FSEAID--------RDICTWNVMMAGYGMH 412
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 145/322 (45%), Gaps = 18/322 (5%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ +I W + I + N+ + LF +M + ++ PN++T + +C + +
Sbjct: 192 FSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLG 251
Query: 74 QMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H +I+++ F KC + A IFD M +DV +W AM+ +AQ
Sbjct: 252 KRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQA 311
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
++ +LF MR G++ + +T++ L L + K H++ GV+ DV +
Sbjct: 312 NCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILK 371
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
I YAKC D+ A+ +F E R + +WN M+AG + +L + M G
Sbjct: 372 TALIDMYAKCGDISGAQRLFS--EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLG 429
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSA 298
+ + T + L + +V+G+ + IH +G V ++ + + G +D A
Sbjct: 430 VKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEA 489
Query: 299 RVLFDGICDRTRVS-WTAMISG 319
+ + + ++ W AM++
Sbjct: 490 YKMIESMPVTPNIAIWGAMLAA 511
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 293/568 (51%), Gaps = 50/568 (8%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQ 149
LD KI + + +V SWNA++ G + + L L+ M G + D T L +
Sbjct: 103 LDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFK 162
Query: 150 AAIHAKHLSLLKSVHSFGI-----HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ L+ S F I +G D D+ + N I + +A VF E
Sbjct: 163 VCAN-----LVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVF--DEG 215
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+R +VSWNS++ G + +++ Y+ M+ + D T++ ++S+ E+L GR
Sbjct: 216 CVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGR 275
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H + G +L +S++N L+ MY KCGD+++ +VLFD + +T VSWT MI GYA+ G
Sbjct: 276 EIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNG 335
Query: 325 DLD-------------------------------EALRLFFAMEAAGELPDLVTVLSMIS 353
LD EAL LF M+ + PD VT+L +S
Sbjct: 336 LLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLS 395
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C Q GAL+ G W NY L +V + ALIDMY+KCG++ A ++F +P + ++
Sbjct: 396 ACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLT 455
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
WT +I G AL G +A+ F ++++ L P+ +TFL VL AC H G +E+G +
Sbjct: 456 WTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKY----F 511
Query: 474 DDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
D +N P+ HYSCM +LLGR G L+EA + +++MP+++DA +WG L AC IH N
Sbjct: 512 DQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRN 571
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+ IGE A L L+PH + YV +AN Y G+W+ NIR MM V+K PG S
Sbjct: 572 LLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIE 631
Query: 592 INGKTCTFTAEDRYHAESELTYPVLDCL 619
+NG F D+ H +SE Y + +
Sbjct: 632 VNGIINEFIVRDKSHPQSEQIYECFNLI 659
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 220/473 (46%), Gaps = 46/473 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYS 73
++ + WN+ IR V K L+L+++M + P+N T+ F+ K CA L
Sbjct: 114 QNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMG 173
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
I G ++K F V A+K+FDE VRD+ SWN+++ G+ +
Sbjct: 174 FEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRR 233
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ ++ M ++ D VT++G+ A + L L + +H + G++ +S+
Sbjct: 234 RQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLV 293
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERL-----------------------------RTVV 210
N + Y KC DL+ +++F + ++ + VV
Sbjct: 294 NALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVV 353
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+WN+M+ C + ++L +R M ++ + D T++ LS+ AL G H++
Sbjct: 354 AWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYI 413
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ LDV++ LI MY+KCG++ A +F+ + R ++WTA+I G A G++++A+
Sbjct: 414 KKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAI 473
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDM 389
F M +G +PD +T L +++ C G +E G K+FD L + ++++
Sbjct: 474 FYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNL 533
Query: 390 YSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ G + +A EL +P E + W + C ++ + +L++LD
Sbjct: 534 LGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLD 586
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 188/427 (44%), Gaps = 65/427 (15%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR--------- 207
LSLL++ SF + A + + + +A + FC I E
Sbjct: 57 LSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLIS-----FCAISESRNLDYCIKILN 111
Query: 208 -----TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALV 261
V SWN+++ GC + L Y+ M+ G R D T L VC ++
Sbjct: 112 NLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFK--VCANLVL 169
Query: 262 Q--GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
G + + GFD D+ + N +I M G+ A +FD C R VSW ++I+G
Sbjct: 170 SYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLING 229
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y ++ EA+ ++ M PD VT++ ++S C Q +L+LG+ Y GL
Sbjct: 230 YVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLK 289
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF------------ 427
+ + NAL+DMY KCG + + LF + +K VVSWTTMI G A NG
Sbjct: 290 ISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPE 349
Query: 428 -------------------VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WA 467
EAL+LF ++ +++P++VT L L AC+ G L+ G W
Sbjct: 350 KNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWT 409
Query: 468 ISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ I+ +N LD + + D+ + G + +AL MP + ++ W ++
Sbjct: 410 HNYIK------KHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMP-RRNSLTWTAIIGG 462
Query: 526 CKIHLNI 532
++ N+
Sbjct: 463 LALYGNV 469
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 3/222 (1%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARVLFDGICD 307
LLS ++ Q + + + I G LD + LIS S+ ++D + + + +
Sbjct: 56 LLSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQN 115
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGKW 366
SW A+I G + + + L L+ M AG PD T + C +G
Sbjct: 116 PNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFE 175
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G ++ + N +I M G G A ++F + +VSW ++I G +
Sbjct: 176 ILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQ 235
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
EA+ ++ Q++ ++P+ VT + V+ AC L+ G I
Sbjct: 236 PREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREI 277
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 213/663 (32%), Positives = 327/663 (49%), Gaps = 57/663 (8%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAK 66
PR+ + I +WN I + L +F M +++ + N + ++ +
Sbjct: 42 PRV----KDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFN 97
Query: 67 LSDLIYSQM-----IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
L+ ++ QM +++ + +V+ RL A ++FD M +DV SWN++L G+AQ G+
Sbjct: 98 LARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY 157
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGI--------- 168
++ +F NM + + ++ GL A +H + L +S + +
Sbjct: 158 VDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213
Query: 169 -----HIGVDA----------DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+G DA D NT IS YA+ L A +F E R V +W
Sbjct: 214 FVRKKKLG-DARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF--DESPTRDVFTWT 270
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR-LVHSHGIH 272
+MV+G D++ F+ M + + ++++ +V + + R L S
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCR 326
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
++S NT+I+ Y + GDI AR FD + R VSW A+I+GYAQ G +EAL +
Sbjct: 327 -----NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNM 381
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F ++ GE + T +S C ALELGK A G V NAL+ MY K
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFK 441
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
CGSI +A + F + EK VVSW TM+AG A +G +AL +F + ++P+ +T + V
Sbjct: 442 CGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGV 501
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
L AC+HTG L++G D G+ P HY+CM DLLGR G+L+EA D +++MP
Sbjct: 502 LSACSHTGLLDRGTEYFYSMTKDYGVI--PTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559
Query: 513 KSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
+ A WG LL A +IH N E+GE A +FK+EP ++ YV ++N YA GRW +
Sbjct: 560 QPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKM 619
Query: 573 RTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
R+ M+ V+K PG S + K TF+ D H E E Y L+ L L REE Y S
Sbjct: 620 RSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLT 679
Query: 633 KWI 635
K +
Sbjct: 680 KLV 682
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 315/600 (52%), Gaps = 15/600 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY--------- 72
W + I + + +F+QM+++ I+P ++T + +KL L+
Sbjct: 118 WTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHG 177
Query: 73 --SQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
S + + + + + KC R+ A ++F+ + RD+ SWN++L ++++G E +L+L
Sbjct: 178 FESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQ 237
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M++ I+ D T A+ L L K VH + G++ D V + + Y +C
Sbjct: 238 AMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCR 297
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
L A VF E+ VV W +M++G D D +L + M+ + + T+ S
Sbjct: 298 CLDPAYKVFKSTTEK--DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASG 355
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L++ G +H + + G LD+ N+L++MY+KC + + +F+ + ++
Sbjct: 356 LAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDL 415
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW A+++G+A+ G L + + F M + PD +TV S++ CG +GAL GKW N+
Sbjct: 416 VSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNF 475
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
L +M AL+DMY KCG++ +A++ F + ++ +V+W+T+I G NG+ A
Sbjct: 476 VLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
L + + + + PN V F++VL AC+H G + KG +SI + K +P L+H +C+
Sbjct: 536 LRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKG--LSIYESMTKDFRMSPNLEHRACV 593
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSA 550
DLL R GK+ EA F + M + + G LL AC+++ +E+G+ +A +F+L+P
Sbjct: 594 VDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDP 653
Query: 551 APYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
+V++AN YA RWDGV T M+ +KK+PG S ++G T TF A H + E
Sbjct: 654 GNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIE 713
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 253/544 (46%), Gaps = 27/544 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS + + H+ L + M++ + + TFP + KAC L+ + +H +V
Sbjct: 17 FNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVV 76
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S + K + K+FD M R+V W ++ +++ G ++
Sbjct: 77 VNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFS 136
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR GIQ VT++ L L LL +H I G ++D+++ N+ ++ Y
Sbjct: 137 MFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYG 193
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F I R +VSWNS+++ + ++ L + M + D T
Sbjct: 194 KCGRIADARRLFESIG--CRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S LS+ L G+LVH + G ++D V + L+ +Y +C +D A +F +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V WTAMISG Q D+AL +F+ M + P T+ S ++ C Q G ++G
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y G+ ++ N+L+ MY+KC + + +F + EK +VSW ++AG A NG
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDH 486
+ + F+++ + LRP+ +T ++LQAC G L +G W + + S P +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS----SLIPCIMT 487
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG--EYVAYCLFK 544
+ + D+ + G L+ A M ++ D W TL+ + EI +Y +
Sbjct: 488 ETALVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTG 546
Query: 545 LEPH 548
+EP+
Sbjct: 547 MEPN 550
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 209/473 (44%), Gaps = 32/473 (6%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WNS + + L L + MK DI+P+ TF A A DL +++HG
Sbjct: 213 IVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHG 272
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
++K +++C LD AYK+F +DV W AM+ G Q +
Sbjct: 273 LMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADK 332
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L +FY M ++ T+ A + S+H + + G+ D+ N+ ++
Sbjct: 333 ALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVT 392
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC+ L+ + +F + E + +VSWN++VAG + F+ M + R D
Sbjct: 393 MYAKCNKLQQSCSIFNKMVE--KDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDS 450
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TV SLL + AL QG+ +H+ + + L+ MY KCG++++A+ FD
Sbjct: 451 ITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDC 510
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R V+W+ +I GY G + ALR + G P+ V +S++S C G + G
Sbjct: 511 MLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKG 570
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCA 422
+++ + N+ ++D+ S+ G + +A + + E +V ++ C
Sbjct: 571 LSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACR 630
Query: 423 LNGEF----VEALDLFHQLMELDLRP----NRVTFLAVLQACTHTGFLEKGWA 467
+NG V A D+F +L+P N V + + +EK W
Sbjct: 631 VNGRVELGKVIARDMF------ELKPVDPGNFVQLANSYASMSRWDGVEKAWT 677
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 185/372 (49%), Gaps = 5/372 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
I + +A S+N+++ + G VL+ + +M+ Q D T L +A +
Sbjct: 5 IHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNL 64
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
S S+H + G+ D + ++ IS YAK + + VF + + R VV W +++
Sbjct: 65 FSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLK--RNVVPWTTII 122
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ D + + ++ M +G + T++SLL L +H I +GF+
Sbjct: 123 GSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGI---SKLPLLLCLHCLIILHGFE 179
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
D+++ N++++MY KCG I AR LF+ I R VSW +++S Y++ G +E L+L AM
Sbjct: 180 SDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAM 239
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ PD T S +S G L LGK GL + V +AL+ +Y +C +
Sbjct: 240 KIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCL 299
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
A ++F + EK VV WT MI+G N +AL +F+Q++E +++P+ T + L AC
Sbjct: 300 DPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAAC 359
Query: 457 THTGFLEKGWAI 468
G + G +I
Sbjct: 360 AQLGCCDIGASI 371
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 7/214 (3%)
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
S+ +++S + +G + L+ + +M+ D T S+ C G
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
GL + + ++LI Y+K G I R++F + ++ VV WTT+I + G+ A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
+F Q+ E ++P VT L++L + K + + + +L + M
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPG------ISKLPLLLCLHCLIILHGFESDLALSNSMV 189
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
++ G+ G++ +A +S+ + D W +LL A
Sbjct: 190 NMYGKCGRIADARRLFESIGCR-DIVSWNSLLSA 222
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 305/600 (50%), Gaps = 29/600 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------------- 86
F +M + I P+ + I ++C L L +M+H IV F
Sbjct: 154 FFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYA 213
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
K ++ +Y +F+ M + SWNAM+ G G LF M+ + T++
Sbjct: 214 KLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVS 273
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF------C 200
+++A +++ K V + +G++ +V V I Y+KC L A VF C
Sbjct: 274 VSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINC 333
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
G+ WN+M++G + ++L Y M NG D+ T S+ ++ ++L
Sbjct: 334 GVN------TPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSL 387
Query: 261 VQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
GR+VH + G DL VSV N + YSKCG ++ R +FD + +R VSWT +++
Sbjct: 388 QFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTA 447
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y+Q +EAL F M G P+ T S++ C LE G+ C GL
Sbjct: 448 YSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTE 507
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ +ALIDMY+KCGSI +A ++F + +VSWT +I+G A +G +AL LF ++
Sbjct: 508 KCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMEL 567
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
++ N VT L VL AC+H G +E+G + Q + G PE++HY+C+ DLLGR G+
Sbjct: 568 SGIKANAVTLLCVLFACSHGGMVEEG--LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGR 625
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L +A++F++ MP++ + +W TLL C++H N+E+GE A + + P +A YV ++N
Sbjct: 626 LDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNT 685
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
Y G ++ ++R +MK VKK PG S + G+ F + D+ H + + Y L+ L
Sbjct: 686 YIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEEL 745
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 215/467 (46%), Gaps = 32/467 (6%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPF----------------VKCDRLDCAYKIFDEMAV 103
+ + CA+ + ++ +HG ++KS F KC A +FDEM
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
R+V SW M+VG + G + + F M GI D + Q+ I L L K V
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H+ + G + V + ++ YAK ++ + VF + E + VSWN+M++GCT
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQ--VSWNAMISGCTSNG 247
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
++ + + M ++ T+VS+ + + G+ V + G + +V V
Sbjct: 248 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 307
Query: 284 TLISMYSKCGDIDSARVLFDG--ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
LI MYSKCG + AR +FD I W AMISGY+Q G EAL L+ M G
Sbjct: 308 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 367
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM-VCNALIDMYSKCGSIGDAR 400
DL T S+ + S +L+ G+ GL V+ V NA+ D YSKCG + D R
Sbjct: 368 TSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVR 427
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++F + E+ +VSWTT++ + + EAL F + E PN+ TF +VL +C
Sbjct: 428 KVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLC 487
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSC----MADLLGRKGKLKEA 503
FLE G + G+ LD C + D+ + G + EA
Sbjct: 488 FLEYGRQV-------HGLLCKAGLDTEKCIESALIDMYAKCGSITEA 527
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 224/481 (46%), Gaps = 25/481 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
WN+ I + + LF +MK PN T ++KA KL D+
Sbjct: 236 WNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCAS 295
Query: 71 ---IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVR--DVASWNAMLVGFAQMGFLENV 125
I ++ G + + KC L A +FD + WNAM+ G++Q G +
Sbjct: 296 ELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEA 355
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 184
L L+ M GI +D T + A +K L + VH + G+D VSV N
Sbjct: 356 LELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIAD 415
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+Y+KC L+ VF +EE R +VSW ++V + +++L + M GF +
Sbjct: 416 AYSKCGFLEDVRKVFDRMEE--RDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQ 473
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T S+L S L GR VH G D + + + LI MY+KCG I A +FD
Sbjct: 474 FTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDK 533
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I + VSWTA+ISGYAQ G +++AL+LF ME +G + VT+L ++ C G +E G
Sbjct: 534 ISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEG 593
Query: 365 KWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCA 422
++ G G+ + +ID+ + G + DA E +P E + W T++ GC
Sbjct: 594 LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCR 653
Query: 423 LNGEFVEALDLFHQLMELDLRPN-RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
++G VE ++ + + L +RP T++ + TG E G ++ + D+G+
Sbjct: 654 VHGN-VELGEIAARKI-LSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVM-KDQGVKKE 710
Query: 482 P 482
P
Sbjct: 711 P 711
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W + + + + L F M++ PN TF + +CA L L Y + +HG
Sbjct: 438 IVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHG 497
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ K+ + KC + A K+FD+++ D+ SW A++ G+AQ G +E+
Sbjct: 498 LLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVED 557
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+LF M L GI+A+ VT++ + A H
Sbjct: 558 ALQLFRRMELSGIKANAVTLLCVLFACSHG 587
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGD 398
++ DL+ VL C + G++ K KD +++ N +YSKC
Sbjct: 63 QVQDLIDVLR---DCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRA 119
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F +P++ V SWT MI G +G F + F +++ + P++ + A++Q+C
Sbjct: 120 ACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIG 179
Query: 459 TGFLEKG 465
LE G
Sbjct: 180 LDSLELG 186
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 299/590 (50%), Gaps = 21/590 (3%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG----------HIVKSP-- 84
+ L LF +MK ++ N ++ A A+ DL + IHG +V +P
Sbjct: 312 EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLM 371
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ KC + A ++F + RD+ +W+A++ Q G+ E L LF M+ ++ + V
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+M + A L L KS+H F + +D+D+S +S YAKC A F +
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 203 EERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
R +V+WNS++ G GD ++ FY+ + + D T+V ++ + L
Sbjct: 492 SSR--DIVTWNSLINGYAQIGDPYNAIDMFYK-LRLSAINPDAGTMVGVVPACALLNDLD 548
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGY 320
QG +H + GF+ D V N LI MY+KCG + SA LF+ + V+W +I+ Y
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q G EA+ F M P+ VT +S++ A G F G N
Sbjct: 609 MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT 668
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+V N+LIDMY+KCG + + +LF + K VSW M++G A++G A+ LF + E
Sbjct: 669 LVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQES 728
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
++ + V+F++VL AC H G +E+G I D I P+L+HY+CM DLLGR G
Sbjct: 729 QVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHI--KPDLEHYACMVDLLGRAGLF 786
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
E L F++ MP++ DAG+WG LL +C++H N+++GE L KLEP + A +V +++ Y
Sbjct: 787 DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 846
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
A GRW R+ M +KK PG S + K F D+ H + E
Sbjct: 847 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLE 896
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 244/520 (46%), Gaps = 25/520 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS IR + ++ L ++ M + +EP+ TF F+ KAC +L HG I
Sbjct: 97 WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K L A ++FD+M RDV +WNAM+ G +Q +
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F +M+LVG++ V+++ L ++ L +S+H G D +V N I Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIH--GYVFRRDFSSAVSNGLIDLYS 274
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D+ +A VF + ++ VSW +M+AG + F + L + M R++ +
Sbjct: 275 KCGDVDVARRVFDQMVDQ--DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS + L +G+ +H + D D+ V L+ MY+KCG+ + A+ LF G+
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG 392
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V+W+A+I+ Q G +EAL LF M+ P+ VT++S++ C L+LGK
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ + ++ AL+ MY+KCG A F + + +V+W ++I G A G+
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELD 485
A+D+F++L + P+ T + V+ AC L++G I I++ + + +
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-----LGFESDCH 567
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + D+ + G L A D W ++ A
Sbjct: 568 VKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 211/430 (49%), Gaps = 22/430 (5%)
Query: 53 NNLTFPFIAKACAKLSDL--IYSQMI-----HGHIVK------SPFVKCDRLDCAYKIFD 99
N L +P + +C L+ L I++Q+I H H + S F KCD A +FD
Sbjct: 31 NYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCD---LARSVFD 87
Query: 100 EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
WN+M+ + + L ++Y M G++ D T + +A A +L
Sbjct: 88 STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQE 147
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
H G++ DV + + Y+K DLK A VF + + R VV+WN+M+AG
Sbjct: 148 GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK--RDVVAWNAMIAGL 205
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS-HGIHYGFDLD 278
+ + ++++F+R M G + VSLL+ F L L S HG + D
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVE---PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS 262
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+V N LI +YSKCGD+D AR +FD + D+ VSW M++GYA G E L LF M+
Sbjct: 263 SAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKL 322
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+ V+ +S ++ LE GK A + +++V L+ MY+KCG
Sbjct: 323 GNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEK 382
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A++LF+ L + +V+W+ +IA G EAL LF ++ ++PNRVT +++L AC
Sbjct: 383 AKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACAD 442
Query: 459 TGFLEKGWAI 468
L+ G +I
Sbjct: 443 LSLLKLGKSI 452
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 14/276 (5%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LLSS L+Q +H+ I GF S+ + LI++YS D AR +FD + +
Sbjct: 38 LLSSCKHLNPLLQ---IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPS 93
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
R+ W +MI Y + +EAL +++ M G PD T ++ C + L+ G WF
Sbjct: 94 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
GL+ +V + L+DMYSK G + ARE+F +P++ VV+W MIAG + + + E
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCE 213
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHY 487
A+D F + + + P+ V+ L + +E +I + + D N +D Y
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLY 273
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
S D+ + + +D D WGT++
Sbjct: 274 SKCGDVDVARRVFDQMVD--------QDDVSWGTMM 301
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 19/303 (6%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
NR+ S I WNS I + + + +F +++ + I P+ T + ACA L+D
Sbjct: 488 FNRM-SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMA-VRDVASWNAMLV 114
L IHG IVK F KC L A +F++ +D +WN ++
Sbjct: 547 LDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIA 606
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ Q G + + F+ MRL + VT + + AA + + H+ I +G +
Sbjct: 607 AYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS 666
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V N+ I YAKC L +E +F ++ + VSWN+M++G D ++ +
Sbjct: 667 NTLVGNSLIDMYAKCGQLDYSEKLFNEMDH--KDTVSWNAMLSGYAVHGHGDRAIALFSL 724
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M + ++D + VS+LS+ + +GR + HS Y D+ ++ + + G
Sbjct: 725 MQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 784
Query: 294 DID 296
D
Sbjct: 785 LFD 787
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 311/608 (51%), Gaps = 22/608 (3%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFV 86
LF QM+ + PN T + A + +H +VK S +
Sbjct: 181 LFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYS 240
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
+ L A +FD+M +RD +WN+M+ G+ + G V +F M+L G++ +T
Sbjct: 241 RLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFAS 300
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ ++ + L+L+K + + G D V + + +KC ++ A +F +EE
Sbjct: 301 VIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEG- 359
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ VVSW +M++GC D ++N + M G + + T ++L+ P + + +
Sbjct: 360 KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHY-PVFVSE---M 415
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H+ I ++ SV L+ Y K G+ A +F+ I + ++W+AM++GYAQ G+
Sbjct: 416 HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGET 475
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQ-SGALELGKWFDNYACSGGLKDNVMVCNA 385
+EA +LF + G P+ T S+I+ C + A E GK F YA L + + V +A
Sbjct: 476 EEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSA 535
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+ MY+K G+I A E+F E+ +VSW +MI+G + +G+ +AL++F ++ + ++ +
Sbjct: 536 LVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVD 595
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
VTF+ V+ ACTH G +EKG +D I NP + HYSCM DL R G L++A+
Sbjct: 596 AVTFIGVITACTHAGLVEKGQKYFNSMINDHHI--NPTMKHYSCMIDLYSRAGMLEKAMG 653
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
+ MP A +W TLL A ++H N+E+GE A L L+P +A YV ++N YA G
Sbjct: 654 IINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGN 713
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
W N+R +M + +VKK PG S + KT +F A D H S Y L L++ ++
Sbjct: 714 WQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKD 773
Query: 626 EAYSSHLK 633
Y K
Sbjct: 774 AGYQPDTK 781
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 221/470 (47%), Gaps = 26/470 (5%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+R +T+ + N + + + L LF + + ++P+ T + CA D
Sbjct: 53 HRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLG 112
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H VK ++K + ++ ++FDEM R+V SW ++L G++
Sbjct: 113 RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWN 172
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G V LF M+ G+ + TV + A ++ + + VH+ + G + + V
Sbjct: 173 GLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVF 232
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ IS Y++ L+ A VF +E +R V+WNSM+AG + + + M G
Sbjct: 233 NSLISLYSRLGMLRDARDVFDKME--IRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAG 290
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ T S++ S L +L+ + GF D VI L+ SKC ++D A
Sbjct: 291 VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDAL 350
Query: 300 VLFDGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
LF + + + VSWTAMISG Q G D+A+ LF M G P+ T ++++
Sbjct: 351 SLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV 410
Query: 359 GALELGKWF--DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
E+ NY S V AL+D Y K G+ DA ++F + K +++W+
Sbjct: 411 FVSEMHAEVIKTNYERSSS------VGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSA 464
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC-THTGFLEKG 465
M+AG A GE EA LFHQL++ ++PN TF +V+ AC + T E+G
Sbjct: 465 MLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQG 514
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 143/265 (53%), Gaps = 4/265 (1%)
Query: 194 MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
+A +F I R T+ N ++ + + ++LN + ++++ + D +T+ + +
Sbjct: 43 IAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFN- 101
Query: 254 FVCPEAL--VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
+C +L GR VH + +G VSV +L+ MY K +++ R +FD + +R V
Sbjct: 102 -ICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVV 160
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SWT++++GY+ G LF M+ G LP+ TV ++I+ G + +G
Sbjct: 161 SWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMV 220
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
G ++ + V N+LI +YS+ G + DAR++F + + V+W +MIAG NG+ +E
Sbjct: 221 VKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVF 280
Query: 432 DLFHQLMELDLRPNRVTFLAVLQAC 456
++F+++ ++P +TF +V+++C
Sbjct: 281 EIFNKMQLAGVKPTHMTFASVIKSC 305
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
I + + W++ + E + LF Q+ + I+PN TF + ACA +
Sbjct: 452 EIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAA 511
Query: 72 -YSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
+ H + +K + + K +D A+++F RD+ SWN+M+ G+
Sbjct: 512 EQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGY 571
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+Q G + L +F M+ + D VT +G+ A HA
Sbjct: 572 SQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHA 609
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 185/608 (30%), Positives = 327/608 (53%), Gaps = 23/608 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I V + E+ + L LFR+M++ +E N TF +AC + + + IH I+
Sbjct: 219 WNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVIL 278
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + C +++ A ++F M +D SWN +L G Q + +
Sbjct: 279 KSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAIN 338
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F +M+ G + D V+V+ + A+ + +L VH++ I G+D+++ + N+ I Y
Sbjct: 339 HFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYG 398
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +K F + E+ ++SW +++AG + D+LN R + +D +
Sbjct: 399 KCCCVKYMGSAFEYMPEK--DLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMI 456
Query: 248 VSLL--SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
S+L S + E L+ + +H + + G D+ + N ++++Y + +D AR +F+ I
Sbjct: 457 GSILLACSGLKSEKLI--KEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESI 513
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ VSWT+MI+ G EAL LF ++ PDL+T++S++ +L+ GK
Sbjct: 514 NSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGK 573
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ G ++ N+L+DMY++CG++ +AR +F + ++ ++ WT+MI ++G
Sbjct: 574 EIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHG 633
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+A+DLF ++ + ++ P+ +TFLA+L AC+H+G + +G I ++ + PE
Sbjct: 634 CGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPE-- 691
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ DLL R L+EA FV++MPI+ A +W LL AC+IH N ++GE A L +L
Sbjct: 692 HYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQL 751
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
++ YV ++N +A GRW+ V +R++MK N++KK PG S + K TF A D+
Sbjct: 752 NTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKS 811
Query: 606 HAESELTY 613
H + Y
Sbjct: 812 HPQCNNIY 819
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 236/467 (50%), Gaps = 19/467 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI WN+ I V+ + + L+++M+ + + TFP + KAC + IH
Sbjct: 112 TIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIH 171
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDE--MAVRDVASWNAMLVGFAQMGF 121
G VK + + KC L A +FD M D SWN+++ G
Sbjct: 172 GVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGE 231
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L LF M+ VG++++ T + QA + + + +H+ + DV V N
Sbjct: 232 SLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNA 291
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I+ YA C ++ AE VF + + VSWN++++G D + D++N ++ M +G +
Sbjct: 292 LIAMYANCGQMEDAERVFKSM--LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D +V++++++ L+ G VH++ I +G D ++ + N+LI MY KC +
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSA 409
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + ++ +SWT +I+GYAQ +AL L ++ D + + S++ C +
Sbjct: 410 FEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSE 469
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+L K Y GGL D +++ NA++++Y + + AR +F ++ K +VSWT+MI C
Sbjct: 470 KLIKEIHGYVLKGGLAD-ILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCC 528
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
NG +EAL+LF+ L+E ++ P+ +T ++VL A L+KG I
Sbjct: 529 VHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEI 575
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 231/481 (48%), Gaps = 41/481 (8%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPF- 59
M S+LPP + T+ ++ + ++ EA ++L F D P FP
Sbjct: 1 MLTSTLPP-------NHTLPTFSHR---PISLKEAFQSLTHFF----TDPLPTTTRFPLQ 46
Query: 60 -----IAKACAKLSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFD 99
+ CA L Q +H H +K+ + KC A K+FD
Sbjct: 47 QAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFD 106
Query: 100 EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
+M+ R + +WNAM+ G + L+ MR++G+ D T + +A K L
Sbjct: 107 KMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRL 166
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF-CGIEERLRTVVSWNSMVAG 218
+H + G V VCN I+ YAKC DL A ++F G+ E+ VSWNS+++
Sbjct: 167 GCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEK-DDPVSWNSIISA 225
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ ++L+ +R M G + T VS L + P + GR +H+ + D
Sbjct: 226 HVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTD 285
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V V N LI+MY+ CG ++ A +F + + VSW ++SG Q +A+ F M+
Sbjct: 286 VYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQD 345
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+G+ PD V+VL+MI+ G+S L G YA G+ N+ + N+LIDMY KC +
Sbjct: 346 SGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKY 405
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH--QLMELDLRPNRVTFLAVLQAC 456
F +PEK ++SWTT+IAG A N ++AL+L QL ++D+ P + ++L AC
Sbjct: 406 MGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIG--SILLAC 463
Query: 457 T 457
+
Sbjct: 464 S 464
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 132/271 (48%), Gaps = 11/271 (4%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
+AL QG+ +H+H + LD ++T + MY KCG A +FD + +RT +W AM
Sbjct: 60 KALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAM 119
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I G EA+ L+ M G D T ++ CG LG A G
Sbjct: 120 IGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGY 179
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYA--LPEKIVVSWTTMIAGCALNGEFVEALDLF 434
V VCNALI MY+KCG +G AR LF + + + VSW ++I+ GE +EAL LF
Sbjct: 180 GGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLF 239
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMAD 492
++ E+ + N TF++ LQAC F++ G I + + N D Y + +
Sbjct: 240 RRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVI-----LKSNHFTDVYVSNALIA 294
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ G++++A +SM K D W TLL
Sbjct: 295 MYANCGQMEDAERVFKSMLFK-DCVSWNTLL 324
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S I W S I V+ A + L LF + + +IEP+ +T + A A LS L +
Sbjct: 515 SKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKE 574
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IHG +++ F +C ++ A IF+ + RD+ W +M+ G
Sbjct: 575 IHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGC 634
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKS 162
++ + LF M + D +T + L A H+ +H ++K+
Sbjct: 635 GKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKN 682
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 194/627 (30%), Positives = 312/627 (49%), Gaps = 20/627 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I + L LF M ++ P+ +ACA+L D+ + +H +
Sbjct: 110 WASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAM 169
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + K + + +F M +D SW +++ GFAQ G L+
Sbjct: 170 KSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQ 229
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M G+ G +A L + +HS + +D + + Y
Sbjct: 230 IFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMY 289
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+C L+ A+ VF GI+ +VSWNS++ C+ +++ M +G R D T
Sbjct: 290 ARCKKLESAKRVFYGIDAP--DLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGIT 347
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V LL + V +A+ GRL+HS+ + G D DVSV N+L+SMY++C D SA +F
Sbjct: 348 VRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETR 407
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
DR V+W ++++ Q L+ +LF ++ + D +++ +++S + G E+ K
Sbjct: 408 DRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQ 467
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNG 425
GL ++ M+ N LID Y+KCGS+ DA +LF + V SW+++I G A +G
Sbjct: 468 VHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSG 527
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ALDLF ++ L +RPN VTF+ VL AC+ G +++G I + G+ P +
Sbjct: 528 YPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVL--PTRE 585
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H SC+ DLL R G+L EA FV MP + D +W TLL K H ++E+G A + +
Sbjct: 586 HCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNI 645
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P +A YV + N Y+ G W+ A ++ M+ + VKK PG+S + G+ F EDR
Sbjct: 646 DPSHSAAYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKSWVKLKGELKVFIVEDRS 705
Query: 606 HAESELTYPVLDCLALHSREEAYSSHL 632
H ESE Y +L+ + + + Y L
Sbjct: 706 HPESEEIYTMLELVGMEMIKAGYVPKL 732
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 215/478 (44%), Gaps = 23/478 (4%)
Query: 64 CAKLSDLIYSQMIHGHIVKSP-----------------FVKCDRLDCAYKIFDEMAVRDV 106
C++L L ++H H++ SP + +C + A +FDEM ++
Sbjct: 48 CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
SW +++ AQ + L LF +M G D + +A + + + VH+
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ +D+ V N ++ Y+K + L+F + E + +SW S++AG
Sbjct: 168 AMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMRE--KDPISWGSIIAGFAQQGCEM 225
Query: 227 DSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
++L +R M+ G + S+ S+ +L G +HS + Y D + +L
Sbjct: 226 EALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSL 285
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
MY++C ++SA+ +F GI VSW ++I+ + +G L EA+ L M +G PD
Sbjct: 286 SDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDG 345
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+TV ++ C A++ G+ +Y GL +V VCN+L+ MY++C A ++F+
Sbjct: 346 ITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHE 405
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
++ VV+W +++ C + LF+ L +R++ VL A G+ E
Sbjct: 406 TRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMV 465
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + G+ + L + + D + G L +A+ + M SD W +L+
Sbjct: 466 KQVHTCTF-KVGLVNDTMLSN--GLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLI 520
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 136/279 (48%), Gaps = 16/279 (5%)
Query: 258 EALVQGRLVHSHGIHY---GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
AL G LVH H + + + N LI+MY +C +SAR++FD + + VSW
Sbjct: 52 RALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWA 111
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
++I+ +AQ +AL LF +M +G PD + S + C + G + +G+ A
Sbjct: 112 SVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKS 171
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
+++V NAL+ MYSK G + D LF + EK +SW ++IAG A G +EAL +F
Sbjct: 172 ENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIF 231
Query: 435 HQLMELDL-RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS----C 489
+++ + PN F +V AC G LE G I +S LDH S
Sbjct: 232 REMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQI-------HSLSVKYRLDHNSYAGCS 284
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
++D+ R KL+ A + D W +++ AC +
Sbjct: 285 LSDMYARCKKLESAKRVFYGID-APDLVSWNSIINACSV 322
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 299/590 (50%), Gaps = 21/590 (3%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG----------HIVKSP-- 84
+ L LF +MK ++ N ++ A A+ DL + IHG +V +P
Sbjct: 312 EVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLM 371
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ KC + A ++F + RD+ +W+A++ Q G+ E L LF M+ ++ + V
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+M + A L L KS+H F + +D+D+S +S YAKC A F +
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 203 EERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
R +V+WNS++ G GD ++ FY+ + + D T+V ++ + L
Sbjct: 492 SSR--DIVTWNSLINGYAQIGDPYNAIDMFYK-LRLSAINPDAGTMVGVVPACALLNDLD 548
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGY 320
QG +H + GF+ D V N LI MY+KCG + SA LF+ + V+W +I+ Y
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q G EA+ F M P+ VT +S++ A G F G N
Sbjct: 609 MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT 668
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+V N+LIDMY+KCG + + +LF + K VSW M++G A++G A+ LF + E
Sbjct: 669 LVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQES 728
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
++ + V+F++VL AC H G +E+G I D I P+L+HY+CM DLLGR G
Sbjct: 729 QVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHI--KPDLEHYACMVDLLGRAGLF 786
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
E L F++ MP++ DAG+WG LL +C++H N+++GE L KLEP + A +V +++ Y
Sbjct: 787 DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 846
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
A GRW R+ M +KK PG S + K F D+ H + E
Sbjct: 847 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLE 896
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 244/520 (46%), Gaps = 25/520 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS IR + ++ L ++ M + +EP+ TF F+ KAC +L HG I
Sbjct: 97 WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K L A ++FD+M RDV +WNAM+ G +Q +
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F +M+LVG++ V+++ L ++ L +S+H G D +V N I Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIH--GYVFRRDFSSAVSNGLIDLYS 274
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D+ +A VF + ++ VSW +M+AG + F + L + M R++ +
Sbjct: 275 KCGDVDVARRVFDQMVDQ--DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS + L +G+ +H + D D+ V L+ MY+KCG+ + A+ LF G+
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG 392
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V+W+A+I+ Q G +EAL LF M+ P+ VT++S++ C L+LGK
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ + ++ AL+ MY+KCG A F + + +V+W ++I G A G+
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELD 485
A+D+F++L + P+ T + V+ AC L++G I I++ + + +
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-----LGFESDCH 567
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + D+ + G L A D W ++ A
Sbjct: 568 VKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 211/430 (49%), Gaps = 22/430 (5%)
Query: 53 NNLTFPFIAKACAKLSDL--IYSQMI-----HGHIVK------SPFVKCDRLDCAYKIFD 99
N L +P + +C L+ L I++Q+I H H + S F KCD A +FD
Sbjct: 31 NYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCD---LARSVFD 87
Query: 100 EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
WN+M+ + + L ++Y M G++ D T + +A A +L
Sbjct: 88 STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQE 147
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
H G++ DV + + Y+K DLK A VF + + R VV+WN+M+AG
Sbjct: 148 GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK--RDVVAWNAMIAGL 205
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS-HGIHYGFDLD 278
+ + ++++F+R M G + VSLL+ F L L S HG + D
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVE---PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS 262
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+V N LI +YSKCGD+D AR +FD + D+ VSW M++GYA G E L LF M+
Sbjct: 263 SAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKL 322
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+ V+ +S ++ LE GK A + +++V L+ MY+KCG
Sbjct: 323 GNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEK 382
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A++LF+ L + +V+W+ +IA G EAL LF ++ ++PNRVT +++L AC
Sbjct: 383 AKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACAD 442
Query: 459 TGFLEKGWAI 468
L+ G +I
Sbjct: 443 LSLLKLGKSI 452
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 14/276 (5%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LLSS L+Q +H+ I GF S+ + LI++YS D AR +FD + +
Sbjct: 38 LLSSCKHLNPLLQ---IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPS 93
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
R+ W +MI Y + +EAL +++ M G PD T ++ C + L+ G WF
Sbjct: 94 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
GL+ +V + L+DMYSK G + ARE+F +P++ VV+W MIAG + + + E
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCE 213
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHY 487
A+D F + + + P+ V+ L + +E +I + + D N +D Y
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLY 273
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
S D+ + + +D D WGT++
Sbjct: 274 SKCGDVDVARRVFDQMVD--------QDDVSWGTMM 301
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 19/303 (6%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
NR+ S I WNS I + + + +F +++ + I P+ T + ACA L+D
Sbjct: 488 FNRM-SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMA-VRDVASWNAMLV 114
L IHG IVK F KC L A +F++ +D +WN ++
Sbjct: 547 LDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIA 606
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ Q G + + F+ MRL + VT + + AA + + H+ I +G +
Sbjct: 607 AYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS 666
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V N+ I YAKC L +E +F ++ + VSWN+M++G D ++ +
Sbjct: 667 NTLVGNSLIDMYAKCGQLXYSEKLFNEMDH--KDTVSWNAMLSGYAVHGHGDRAIALFSL 724
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M + ++D + VS+LS+ + +GR + HS Y D+ ++ + + G
Sbjct: 725 MQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 784
Query: 294 DID 296
D
Sbjct: 785 LFD 787
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 213/663 (32%), Positives = 327/663 (49%), Gaps = 57/663 (8%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAK 66
PR+ + I +WN I + L +F M +++ + N + ++ +
Sbjct: 42 PRV----KDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFN 97
Query: 67 LSDLIYSQM-----IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
L+ ++ QM +++ + +V+ RL A ++FD M +DV SWN++L G+AQ G+
Sbjct: 98 LARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY 157
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGI--------- 168
++ +F NM + + ++ GL A +H + L +S + +
Sbjct: 158 VDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213
Query: 169 -----HIGVDA----------DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+G DA D NT IS YA+ L A +F E R V +W
Sbjct: 214 FVRKKKLG-DARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF--DESPTRDVFTWT 270
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR-LVHSHGIH 272
+MV+G D++ F+ M + + ++++ +V + + R L S
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCR 326
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
++S NT+I+ Y + GDI AR FD + R VSW A+I+GYAQ G +EAL +
Sbjct: 327 -----NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNM 381
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F ++ GE + T +S C ALELGK A G V NAL+ MY K
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFK 441
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
CGSI +A + F + EK VVSW TM+AG A +G +AL +F + ++P+ +T + V
Sbjct: 442 CGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGV 501
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
L AC+HTG L++G D G+ P HY+CM DLLGR G+L+EA D +++MP
Sbjct: 502 LSACSHTGLLDRGTEYFYSMTKDYGVI--PTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559
Query: 513 KSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
+ A WG LL A +IH N E+GE A +FK+EP ++ YV ++N YA GRW +
Sbjct: 560 QPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKM 619
Query: 573 RTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
R+ M+ V+K PG S + K TF+ D H E E Y L+ L L REE Y S
Sbjct: 620 RSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLT 679
Query: 633 KWI 635
K +
Sbjct: 680 KLV 682
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 53/122 (43%), Gaps = 38/122 (31%)
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
S P HY+CM DLLGR +L+E G LL A +IH N E+GE
Sbjct: 795 SVTPTSKHYTCMIDLLGRVDRLEE-----------------GALLGASRIHGNTELGEKA 837
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A FK+ P ++ G++ +R + V+K PG S F + K T
Sbjct: 838 AQMFFKMGPQNS-----------------GISKMRDV----GVQKVPGYSWFEVQNKIHT 876
Query: 599 FT 600
F+
Sbjct: 877 FS 878
>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 989
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 313/582 (53%), Gaps = 21/582 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + NE + L F +M+ ++ P+ T + C + DL ++ IH + V
Sbjct: 411 WNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAV 470
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ F C L +YK+F +M VR + SWN ++ G+A++ LE ++
Sbjct: 471 RNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVK 530
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ MR G+Q D VT++GL + A+ ++ +S+HS + G + D+S+ NT I+ Y+
Sbjct: 531 LFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYS 590
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
C ++ + +F + R VS+N ++ G + ++ L +R M+ N + TV
Sbjct: 591 NCGSVEACQRLFDNLSSR--NTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITV 648
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL VC + QG+ VH + I L+ S + I MYS+ ++D + LF+ + +
Sbjct: 649 LNLLP--VC-QNHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGE 705
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R + W A++S Q D A F M PD VT++S++S C Q G +LG+
Sbjct: 706 RNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECV 765
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G ++V NALIDM+S+CGS+ ARELF + K V+W+ MI +++G+
Sbjct: 766 TALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHGDC 825
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
AL +F +++ ++P+ +TF+ +L AC+H+GF+E+ A+ D GI+ P ++HY
Sbjct: 826 ESALAIFSMMIDSGVKPDDITFVIILSACSHSGFVEQARALFKSLQIDHGIT--PRMEHY 883
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DLLGR G L EA D V+SM + + +LL AC+ H N +IGE V L +
Sbjct: 884 ACMVDLLGRSGHLDEAYDVVRSMSFRPSESLLESLLGACRFHGNSKIGEAVGNLLIDSQH 943
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
+ YV ++N YA G+W+ +R M+ ++K G SL
Sbjct: 944 GNPRSYVMLSNIYASVGKWNDYEWLRVDMEAKGLRKDAGVSL 985
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 230/456 (50%), Gaps = 20/456 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
R T+ N +R + + H+ LL L+R + +N TFP + KACA +S L
Sbjct: 103 RRPTVYSLNLAVR-CFSDHGFHRELLDLYRTLCT--FGSDNFTFPPVIKACAAVSCLPLG 159
Query: 74 QMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H ++++ + K + + +FD M +D+ SWNAM+ G++
Sbjct: 160 REMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLN 219
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G L + M+ G++A+ T++ + A A S+H+F + GV D S+
Sbjct: 220 GSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLA 279
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
IS YA DDL + ++F + ++ +VS+NSM++ K+ +S + +R M G
Sbjct: 280 PALISLYAALDDLSSSRVLF--DLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAG 337
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
++ TV+S+L + + G VH I +G +SV++ L+SMYSK G++DSA+
Sbjct: 338 LGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAK 397
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LFD ++ + W ++ISGY + + AL F M+ PD TV+ +I GC
Sbjct: 398 HLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIK 457
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
L + K YA + N V NAL+ MY CG + + +LF + ++++SW T+I+
Sbjct: 458 DLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIIS 517
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
G A + ++ LF Q+ + L+ + VT + ++ +
Sbjct: 518 GYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISS 553
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 218/450 (48%), Gaps = 25/450 (5%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N +REAV + +M+Q+ + N T IA AC D +H +K
Sbjct: 219 NGSLREAVEATQ---------EMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALK 269
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
S + D L + +FD V+D+ S+N+M+ + Q G + +
Sbjct: 270 CGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDV 329
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M G+ + VTV+ + ++L SVH I G+ +SV + +S Y+K
Sbjct: 330 FRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSK 389
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
+L A+ +F E+ + WNS+++G ++++ +L+ + M D TTV+
Sbjct: 390 LGELDSAKHLFDSCTEKNNLL--WNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVI 447
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
++ + L + +H++ + F+L+ SV+N L++MY CG++ S+ LF + R
Sbjct: 448 KVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVR 507
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+SW +ISGYA+ DL+ +++LFF M G D+VT++ +IS + +G+
Sbjct: 508 MLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLH 567
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
+ A G ++ + N LI MYS CGS+ + LF L + VS+ ++ G N
Sbjct: 568 SLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSE 627
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTH 458
E L LF Q+++ + PN +T L +L C +
Sbjct: 628 EILPLFRQMVKNEQEPNHITVLNLLPVCQN 657
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 235/522 (45%), Gaps = 29/522 (5%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
+ PR + +S + S+ ++A+ K+ A +L R + D P L K +
Sbjct: 1 MNPRHKTLPKSFETPNFLSKSKQALAKSFA--SLTPPRALPHPDAFPEFLHATRSLKCLS 58
Query: 66 KLSDLIYSQMIHGHIVKSP---------FVKCDRLDCAYKIFDEMAVR--DVASWNAMLV 114
KL L+ + G I + ++ R A +F R V S N +
Sbjct: 59 KLHALL---AVAGAIARDTSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVR 115
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
F+ GF +L L+ + G +D T + +A L L + +H + G +
Sbjct: 116 CFSDHGFHRELLDLYRTLCTFG--SDNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEG 173
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+V V + YAK + + VF + ++ ++SWN+M++G + +++ +
Sbjct: 174 NVGVQTALLDMYAKAGWIGASRTVFDFMGQK--DLISWNAMISGYSLNGSLREAVEATQE 231
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M +G R + +T+V + + G +H+ + G D S+ LIS+Y+ D
Sbjct: 232 MQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDD 291
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ S+RVLFD + VS+ +MIS Y Q G E+ +F M AG P+LVTV+S++
Sbjct: 292 LSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPT 351
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C + LG GL + + V +AL+ MYSK G + A+ LF + EK + W
Sbjct: 352 CSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLW 411
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
++I+G +N E+ ALD F ++ ++ P+ T + V+ C H L A SI Y
Sbjct: 412 NSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLR--MAKSIHAY- 468
Query: 475 DKGISYNPELDHYSCMADLL---GRKGKLKEALDFVQSMPIK 513
+ EL+ S M LL G G+L + Q M ++
Sbjct: 469 --AVRNRFELNQ-SVMNALLAMYGDCGELSSSYKLFQKMEVR 507
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 273/510 (53%), Gaps = 7/510 (1%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ + + +C +D A ++F E+ RD+ +W+A++ F Q G+ + L LF +M+ G+QA+
Sbjct: 29 IMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQAN 88
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
V ++ A L L KS+H + VD D+SV +S YAKC +A +F
Sbjct: 89 KVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFN 148
Query: 201 GIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ + VV+WN+M+ G G+ F +L + + + + T+V LL +F
Sbjct: 149 RMP--CKDVVTWNAMINGYAQIGEPFP-ALEMFHKLQLSELNPNSGTMVGLLPAFALLND 205
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMIS 318
L QG +H I GF+ + V LI MY+KCG + A LF C + VSW MI+
Sbjct: 206 LDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIA 265
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY G +A F M+ P++VT+++++ AL G Y G +
Sbjct: 266 GYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQS 325
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
V N LIDMY+KCG + + ++F+ + K VSW M+AG A++G A++LF ++
Sbjct: 326 KTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQ 385
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ ++R + +F+ VL AC H G + +G I K P+L+HY+CMADLLGR G
Sbjct: 386 DSEIRLDSFSFINVLSACRHAGLIGEGR--KIFDSMSKQHQLEPDLEHYACMADLLGRAG 443
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
E LD ++SMP++ DAG+WG LL A +H N+++ E+ + L KLE + Y ++N
Sbjct: 444 LFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNLTHYAALSN 503
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
YA GRW V N R+ + + ++K PG S
Sbjct: 504 TYARSGRWADVGNTRSKITKTGLRKSPGYS 533
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 201/436 (46%), Gaps = 17/436 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W++ I V + L LFR M+ ++ N + ACA++S L + +H
Sbjct: 57 WSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAV 116
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G + S + KC A +F+ M +DV +WNAM+ G+AQ+G L
Sbjct: 117 KANVDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALE 176
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F+ ++L + + T++GL A L +H I G +++ V I YA
Sbjct: 177 MFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYA 236
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L AE +F R + VSWN M+AG + D+ + + M + ++ T+
Sbjct: 237 KCGSLSGAEFLFHRTGCR-KDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTI 295
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V++L + AL G +H++ I GF V N LI MY+KCG +D + +F + +
Sbjct: 296 VTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKN 355
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
+ VSW M++GYA G A+ LF M+ + D + ++++S C +G + G K
Sbjct: 356 KDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKI 415
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
FD+ + L+ ++ + D+ + G + +L ++P E W ++ ++
Sbjct: 416 FDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHS 475
Query: 426 EFVEALDLFHQLMELD 441
A H L +L+
Sbjct: 476 NVQLAEFALHHLDKLE 491
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 182/368 (49%), Gaps = 7/368 (1%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H F G+D+DV+V ++ YA+C ++ A+ +F E + R +V+W++++A
Sbjct: 10 IHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLF--QEIKGRDLVAWSAIIAAFVQS 67
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
++L+ +R M G + + ++S L + +L G+ +H + DLD+SV
Sbjct: 68 GYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVG 127
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
L+SMY+KCG A LF+ + + V+W AMI+GYAQ G+ AL +F ++ +
Sbjct: 128 TALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELN 187
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ T++ ++ L+ G G + V ALIDMY+KCGS+ A L
Sbjct: 188 PNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFL 247
Query: 403 FYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
F+ K VSW MIAG +G ++A F Q+ +++PN VT + VL A H
Sbjct: 248 FHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSA 307
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
L G +++ Y + + + + +C+ D+ + G L + M K D W
Sbjct: 308 LRAG--MTLHAYVIR-MGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNK-DTVSWNV 363
Query: 522 LLCACKIH 529
+L +H
Sbjct: 364 MLAGYAVH 371
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 144/289 (49%), Gaps = 4/289 (1%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
AL +G +H G D DV+V +++MY++CG++D+A+ LF I R V+W+A+I
Sbjct: 2 RALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAII 61
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ + Q G EAL LF +M+ G + V +LS + C + +L+LGK A +
Sbjct: 62 AAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVD 121
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
++ V AL+ MY+KCG A LF +P K VV+W MI G A GE AL++FH+L
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKL 181
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+L PN T + +L A L++G S I + E + + D+ +
Sbjct: 182 QLSELNPNSGTMVGLLPAFALLNDLDQG---SCIHGKIIKCGFESECHVKTALIDMYAKC 238
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
G L A + D W ++ A +H I + A+C KLE
Sbjct: 239 GSLSGAEFLFHRTGCRKDEVSWNVMI-AGYMHSGHAIDAFSAFCQMKLE 286
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 208/628 (33%), Positives = 327/628 (52%), Gaps = 35/628 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ--MIHGH 79
WN + + L F + + +PN + + +A +L IYSQ HG+
Sbjct: 116 WNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELK--IYSQGFAFHGY 173
Query: 80 IVKSPF-----VKCDRLDC--------AYKIFDEMAVR-DVASWNAMLVGFAQMGFLENV 125
I +S F V+ L A+K+F EM+VR DV SW+ M+ GF Q+G E
Sbjct: 174 IFRSGFSAILSVQNSLLSLYAEVHMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQG 233
Query: 126 LRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+F NM GI D VTV+ + +A + K +SL VH I G++ D+ V N+ I
Sbjct: 234 FLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLID 293
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+KC ++ A F I E+ ++SWN M++ + ++L M+ G D
Sbjct: 294 MYSKCFNVHSAFKAFKEIPEK--NIISWNLMLSAYILNESHLEALALLGTMVREGAEKDE 351
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ ++L ++ R VH I G++ + ++N++I Y+KC ++ AR++FDG
Sbjct: 352 VTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDG 411
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + V+W+ MI+G+A+ G DEA+ +F M +P+ V++++++ C S L
Sbjct: 412 MNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQS 470
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
KW A GL V + ++IDMYSKCG I + F +P+K VV W+ MI+ +N
Sbjct: 471 KWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRIN 530
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EAL LF ++ + +PN VT L++L AC+H G +E+G + GI P L
Sbjct: 531 GLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIE--PGL 588
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG--IWGTLLCACKIHLNIEIGEYVAYCL 542
+HYSC+ D+L R GK EAL+ ++ +P + +AG IWGTLL +C+ + NI +G A +
Sbjct: 589 EHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRV 648
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
+LEP S+A Y+ +N YA G A +R + K VK G SL HIN +T F A
Sbjct: 649 LQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAG 708
Query: 603 DRYHAESELTYPV---------LDCLAL 621
D + ++ Y + +DCL L
Sbjct: 709 DVLNPRADEIYLMVKKLHGVMKIDCLKL 736
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 253/532 (47%), Gaps = 44/532 (8%)
Query: 24 SQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
S+I++A + L L+ +++ + + + P I KAC+ S + + M HG ++K
Sbjct: 17 SKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAM-HGCLIK 75
Query: 83 SP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
++K LD A + FD +D SWN M+ G G + L
Sbjct: 76 QGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCW 135
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F R Q + +++ + QA K S + H + G A +SV N+ +S YA+
Sbjct: 136 FIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAE 195
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTV 247
+ A +F + R VVSW+ M+ G + + +R+M+ G D TV
Sbjct: 196 V-HMYFAHKLFGEMSVR-NDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTV 253
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS+L + + + G +VH I G + D+ V N+LI MYSKC ++ SA F I +
Sbjct: 254 VSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPE 313
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SW M+S Y EAL L M G D VT+ + L++ K F
Sbjct: 314 KNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTL---------ANVLQIAKHF 364
Query: 368 -DNYACSG--------GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
D+ C G + N ++ N++ID Y+KC + AR +F + +K VV+W+TMI
Sbjct: 365 LDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMI 424
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKG 477
AG A NG+ EA+ +F Q+ E ++ PN V+ + +++AC + L + WA I +G
Sbjct: 425 AGFARNGKPDEAISVFKQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAV--RRG 481
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ E+D + + D+ + G ++ ++ +P K + W ++ A +I+
Sbjct: 482 LA--SEVDIGTSIIDMYSKCGDIEASIRAFNQIPQK-NVVCWSAMISAFRIN 530
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 313/558 (56%), Gaps = 24/558 (4%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF--LENVLRLFYNMRLV 135
G+ + + + +C RL A ++FDEM +D+ SWNAML G+AQ G LE +L +F M
Sbjct: 214 GNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAIL-VFLEMLKE 272
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G++ D V+ G A H K L + +HS + IG D V VCN IS+Y+KC+D++ A
Sbjct: 273 GMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDA 332
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
+LVF I +R VVSW +M++ +D+ + + M +G + T V L+ +
Sbjct: 333 KLVFESIIDR--NVVSWTTMISISE-----EDATSLFNEMRRDGVYPNDVTFVGLIHAIT 385
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
+ +G+++H + F +++V N+LI+MY+K + + +F+ + R +SW +
Sbjct: 386 MKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNS 445
Query: 316 MISGYAQKGDLDEALRLFFA--MEAAGELPDLVTVLSMISGCGQSGALEL--GKWFDNYA 371
+ISGYAQ G EAL+ F + ME+ P+ T S++S + A+ + G+ ++
Sbjct: 446 LISGYAQNGLWQEALQTFLSALMESR---PNEFTFGSVLSSIASAEAISMRHGQRCHSHI 502
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
GL N +V +AL+DMY+K GSI ++ +F P K V+WT +I+ A +G++ +
Sbjct: 503 LKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVM 562
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
+LF + ++P+ +TFLAV+ AC G ++ G+ + D I +PE HYS M
Sbjct: 563 NLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPE--HYSSMV 620
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAA 551
D+LGR G+LKEA +FV +P + + +LL AC+IH N+++ + VA L ++EP +
Sbjct: 621 DMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSG 680
Query: 552 PYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT-----FTAEDRYH 606
YV M+N YA G W+ VA IR M+ V+K G S + + F+++D++H
Sbjct: 681 SYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFH 740
Query: 607 AESELTYPVLDCLALHSR 624
+SE Y + + L L +
Sbjct: 741 PQSEEIYRMAETLGLEMK 758
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 162/565 (28%), Positives = 263/565 (46%), Gaps = 59/565 (10%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPN--NLTFPFIAKACAKLSDLIYSQ 74
+TI N + A+ +N + + L LF++ Q N +T + KAC S L
Sbjct: 41 TTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKL--GC 98
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH + S F+ K D A +F+ + D+ SWN +L GF +
Sbjct: 99 QIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS- 157
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSV 178
++ L M G+ D VT T A + H + +HS + G+D +V V
Sbjct: 158 --DDALNFALRMNFTGVAFDAVTCT--TVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMY 237
N I+ Y++C L A VF E R + +VSWN+M++G G+ +++ + M+
Sbjct: 214 GNALITMYSRCCRLVEARRVF--DEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLK 271
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G +LD + +S+ + GR +HS + G+D V V N LIS YSKC DI+
Sbjct: 272 EGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIED 331
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A+++F+ I DR VSWT MIS + +A LF M G P+ VT + +I
Sbjct: 332 AKLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRRDGVYPNDVTFVGLIHAITM 386
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+E G+ + V N+LI MY+K S+ D+ ++F L + ++SW ++
Sbjct: 387 KNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSL 446
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK- 476
I+G A NG + EAL F + ++ RPN TF +VL + + AIS +++ +
Sbjct: 447 ISGYAQNGLWQEALQTFLSAL-MESRPNEFTFGSVLSS------IASAEAIS-MRHGQRC 498
Query: 477 -------GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G++ NP + S + D+ ++G + E+L P+K++ W ++ A H
Sbjct: 499 HSHILKLGLNTNPIVS--SALLDMYAKRGSICESLGVFSETPLKNEVA-WTAIISAHARH 555
Query: 530 LNIEIGEYVAYC-LFK-LEPHSAAP 552
G+Y A LFK +E P
Sbjct: 556 -----GDYEAVMNLFKDMEREGVKP 575
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 184/603 (30%), Positives = 313/603 (51%), Gaps = 25/603 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + LF +M++ I+P+++T + +S+L + Q +HG +
Sbjct: 130 WTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT---VLSLLFGVSELAHVQCLHGCAI 186
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
F+ KC ++ + K+FD M RD+ SWN+++ +AQ+G + VL
Sbjct: 187 LYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLL 246
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L MRL G +A T + A L L + +H + G D V + I Y
Sbjct: 247 LLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYL 306
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
K + +A +F ER + VV W +M++G D +L +R M+ G +
Sbjct: 307 KGGKIDIAFRMF----ERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTA 362
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ S++++ + G + + + LDV+ N+L++MY+KCG +D + ++FD +
Sbjct: 363 TMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMM 422
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R VSW AM++GYAQ G + EAL LF M + + PD +T++S++ GC +G L LGK
Sbjct: 423 NRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGK 482
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
W ++ GL+ ++V +L+DMY KCG + A+ F +P +VSW+ +I G +G
Sbjct: 483 WIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHG 542
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ AL + + +E ++PN V FL+VL +C+H G +E+G I D GI+ P+L+
Sbjct: 543 KGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIA--PDLE 600
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H++C+ DLL R G+++EA + + + G +L AC+ + N E+G+ +A + L
Sbjct: 601 HHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILML 660
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
P A +V++A+ YA +W+ V T M+ +KK PG S I+G TF +
Sbjct: 661 RPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNS 720
Query: 606 HAE 608
H +
Sbjct: 721 HPQ 723
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 240/528 (45%), Gaps = 25/528 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+T N N+ I + H+ L + M + + + TFP + KAC+ L+ +
Sbjct: 24 ATTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTL 83
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H I+ S + K D A K+FD M R+V W ++ +++ G +
Sbjct: 84 HQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRV 143
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
LF MR GIQ VTV+ L H+ L H I G +D+++ N+
Sbjct: 144 PEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQCL---HGCAILYGFMSDINLSNSM 200
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
++ Y KC +++ + +F ++ R +VSWNS+++ + L + M GF
Sbjct: 201 LNVYGKCGNIEYSRKLFDYMDH--RDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEA 258
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T S+LS L GR +H + GF LD V +LI +Y K G ID A +F
Sbjct: 259 GPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMF 318
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ D+ V WTAMISG Q G D+AL +F M G P T+ S+I+ C Q G+
Sbjct: 319 ERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYN 378
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
LG Y L +V N+L+ MY+KCG + + +F + + +VSW M+ G A
Sbjct: 379 LGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYA 438
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYN 481
NG EAL LF+++ + P+ +T +++LQ C TG L G W S + +
Sbjct: 439 QNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRN----GLR 494
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
P + + + D+ + G L A MP D W ++ H
Sbjct: 495 PCILVDTSLVDMYCKCGDLDTAQRCFNQMP-SHDLVSWSAIIVGYGYH 541
>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
Length = 992
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 306/582 (52%), Gaps = 21/582 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + N+ + + R+M+ ++P+ LT + C DL + IH + V
Sbjct: 413 WNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAV 472
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + C +L K+F M VR + SWN ++ GFA+ G LR
Sbjct: 473 RSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLR 532
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F MRL +Q D VT++ L + + +++ +SVHS I G + DVSV N I+ Y
Sbjct: 533 FFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYT 592
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
C ++ E +F + +S+N+++ G + F++ L + HM+ N + ++ T+
Sbjct: 593 NCGIIQAGEKLFDSLSSV--NTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITL 650
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL +C L QG+ VHS+ I L+ S+ + I MYS+ +++ LF + +
Sbjct: 651 LNLLP--ICHSQL-QGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGE 707
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R + W A++S Q A F ++ D VT+L++IS C Q G +L +
Sbjct: 708 RNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECV 767
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A G ++V NALIDM+S+CGSI AR++F EK VSW+TMI +++G+
Sbjct: 768 TAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDG 827
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
ALDLF ++ ++P+ +TF++VL AC+ +GFLE+G + D GI+ P ++HY
Sbjct: 828 GSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGIT--PRMEHY 885
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DLLGR G L EA D V +MP + + +LL AC+ H N ++GE V L + +
Sbjct: 886 ACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDH 945
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
+ YV ++N YA G+W +R+ M+ + K G SL
Sbjct: 946 GNPRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVSL 987
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 221/435 (50%), Gaps = 19/435 (4%)
Query: 36 HKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP---------- 84
H+ LL L+R++ +N TFP + +ACA +S L + +H +V++
Sbjct: 125 HRELLGLYREVCA--FGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTA 182
Query: 85 ----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ K ++D + ++FD M RD+ SWNAM+ G++ G L M+ G + +
Sbjct: 183 LLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPN 242
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
+++G+ +H+F + GV D S+ +IS YA L + +F
Sbjct: 243 ASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLF- 301
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ + +VS NSM++ C ++ + +R M G ++ TVVS+L +
Sbjct: 302 -HQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGI 360
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G VH I +G VSV++ L+SMYSK GD+DSA LF + +++++ W ++ISGY
Sbjct: 361 NHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGY 420
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+ + M+ G PD +TV+S+IS C + L +GK YA L+ N
Sbjct: 421 LVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNE 480
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V NAL+ MY+ CG + +LF+ + + ++SW T+I+G A NG+ V L F Q+
Sbjct: 481 SVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLA 540
Query: 441 DLRPNRVTFLAVLQA 455
D++ + VT +A++ +
Sbjct: 541 DMQFDLVTLIALISS 555
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 208/429 (48%), Gaps = 16/429 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAY------ 95
+QM+Q+ PN + I + L +H +KS + + L A+
Sbjct: 231 LKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAA 290
Query: 96 --------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
+F + V ++ S N+M+ Q G E +F MR G+ + VTV+ +
Sbjct: 291 FGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSI 350
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+ ++ +SVH I G+ VSV + +S Y+K DL A +F + E+ +
Sbjct: 351 LPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQ 410
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+ WNS+++G +K++ + R M G D TV+S++S E L G+ +H
Sbjct: 411 LL--WNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIH 468
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
++ + +L+ SV+N L++MY+ CG + LF + RT +SW +ISG+A+ GD
Sbjct: 469 AYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSV 528
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
LR F M A DLVT++++IS + +G+ + A G +V V NALI
Sbjct: 529 ACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALI 588
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
MY+ CG I +LF +L +S+ ++ G N F E L LF+ +++ D +PN +
Sbjct: 589 TMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNII 648
Query: 448 TFLAVLQAC 456
T L +L C
Sbjct: 649 TLLNLLPIC 657
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 4/364 (1%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+V N + F+ GF +L L+ + G +D T + +A L L K VH
Sbjct: 108 EVYDLNIAVRCFSDHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVH 165
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ G +V V + YAK + ++ VF G++ R ++SWN+M++G +
Sbjct: 166 CRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSR--DLISWNAMISGYSLNGC 223
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
++ + M +GFR + +++V ++S G +H+ + G D S+
Sbjct: 224 LLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPA 283
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
ISMY+ G + S+ LF VS +MIS Q G ++A +F M G +P+
Sbjct: 284 FISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPN 343
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
LVTV+S++ C + G+ GL + V V +AL+ MYSK G + A LF
Sbjct: 344 LVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFS 403
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
++ EK + W ++I+G +N ++ + ++ + P+ +T ++V+ C HT L
Sbjct: 404 SVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHV 463
Query: 465 GWAI 468
G +I
Sbjct: 464 GKSI 467
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 143/300 (47%), Gaps = 16/300 (5%)
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
L YR + F D T ++ + L G+ VH + G +V V L+ M
Sbjct: 129 LGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDM 186
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD---L 345
Y+K G +D +R +FDG+ R +SW AMISGY+ G L EA M+ G P+ L
Sbjct: 187 YAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSL 246
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
V ++SM+SG G A G +A G+ + + A I MY+ G + + LF+
Sbjct: 247 VGIVSMVSGLGVRDA---GDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQ 303
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+VS +MI+ C +G + +A +F + L PN VT +++L C++ + G
Sbjct: 304 SLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHG 363
Query: 466 WAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
++ +I++ G++ ++ S + + + G L A+ S+ KS +W +L+
Sbjct: 364 ESVHGMVIKF---GLA--EQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQL-LWNSLI 417
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 302/571 (52%), Gaps = 36/571 (6%)
Query: 74 QMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR 133
Q+I ++ F D L A IF+ + ++ WN M G A L+L+ M
Sbjct: 1 QLIEFSVLSPHF---DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMI 57
Query: 134 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLK 193
+G+ + + L ++ +K L + +H + +G D D+ V + IS YA+ L+
Sbjct: 58 SLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLE 117
Query: 194 MAELVF---------------CGIEER--------------LRTVVSWNSMVAGCTYGDK 224
A VF G R ++ VVSWN+M++G
Sbjct: 118 DAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCN 177
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
F ++L Y+ MM + D +T+V+++S+ ++ GR +HS +GF ++ ++N
Sbjct: 178 FKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNV 237
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI +YSKCG++++A LF G+ + +SW +I G+ EAL LF M +GE P+
Sbjct: 238 LIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPN 297
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDAREL 402
VT+LS++ C GA+++G+W Y G+ + + +LIDMY+KCG I A+++
Sbjct: 298 DVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQV 357
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F ++ + + SW MI G A++G+ A DLF ++ + + P+ +TF+ +L AC+H+G L
Sbjct: 358 FDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGML 417
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
+ G I D I+ P+L+HY CM DLLG G KEA + +++MP++ D IW +L
Sbjct: 418 DLGRHIFRSMSQDYKIT--PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSL 475
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L ACK+H N+E+GE A L K+EP + YV ++N YA GRWD VA IRT++ +K
Sbjct: 476 LKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIK 535
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTY 613
K PG S I+ F D++H + Y
Sbjct: 536 KAPGCSSIEIDSVVHEFIIGDKFHPRNREIY 566
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 226/452 (50%), Gaps = 51/452 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R +++ L L+ M + PN+ +FPF+ K+CAK LI Q IHGH++
Sbjct: 33 WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVL 92
Query: 82 K--------------SPFVKCDRLDCAYKI------------------------------ 97
K S + + RL+ A+K+
Sbjct: 93 KLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARK 152
Query: 98 -FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
FDE++V+DV SWNAM+ G+ + + L L+ +M ++ D T++ + A +
Sbjct: 153 LFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGS 212
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L + +HS+ G +++ + N I Y+KC +++ A +F G+ + + V+SWN+++
Sbjct: 213 IELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK--KDVISWNTLI 270
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIHYG 274
G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H + G
Sbjct: 271 GGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKG 330
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
S++ +LI MY+KCGDI++A+ +FD + R+ SW AMI G+A G + A LF
Sbjct: 331 VTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFS 390
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKC 393
M G PD +T + ++S C SG L+LG+ F + + + + +ID+ C
Sbjct: 391 KMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHC 450
Query: 394 GSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
G +A+E+ +P E V W +++ C ++
Sbjct: 451 GLFKEAKEMIRTMPMEPDGVIWCSLLKACKMH 482
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 291/537 (54%), Gaps = 20/537 (3%)
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V SWN+++ FA+ G L F +MR + + + T ++ L K +H
Sbjct: 51 VYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQ 110
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
G +D+ V + I Y+KC L A +F I ER VVSW SM++G ++
Sbjct: 111 QAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPER--NVVSWTSMISGYVQNERA 168
Query: 226 DDSLNFYRHMM------YNGFRLDVTTVVSLLSSFV---CPEALVQG--RLVHSHGIHYG 274
+++ ++ + Y+ V S+L V C V+ VH + G
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG 228
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
F+ ++V NTL+ Y+KCG+I +R +FDG+ + SW ++I+ YAQ G EA LF
Sbjct: 229 FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288
Query: 335 AMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M GE+ + VT+ +++ C SGAL++GK + L+DN++V +++DMY KC
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC 348
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR+ F L K V SWT M+AG ++G EA+ +F++++ ++PN +TF++VL
Sbjct: 349 GRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVL 408
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMP 511
AC+H G L++GW ++ ++ P ++HYSCM DLLGR G LKEA +Q M
Sbjct: 409 AACSHAGLLKEGWH----WFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMK 464
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
+K D +WG+LL AC+IH N+E+GE A LFKL+P + YV ++N YA GRWD V
Sbjct: 465 VKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVER 524
Query: 572 IRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+R +MK + + K PG S+ G+ F D+ H + E Y LD L + +E Y
Sbjct: 525 MRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGY 581
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 214/451 (47%), Gaps = 34/451 (7%)
Query: 4 SSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA 63
++L + +++ WNS I + ++ + L F M++ + PN TFP K+
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 64 CAKLSDLIYSQMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASW 109
C+ L DL + IH V S + KC L+ A K+FDE+ R+V SW
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVG-----------IQADFVTVMGLTQAAIHAKHLS 158
+M+ G+ Q + LF LV + D V + + A S
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
+ + VH + G + ++V NT + +YAKC ++ ++ VF G+EE V SWNS++A
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEE--TDVCSWNSLIAV 273
Query: 219 CTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
++ + + M+ G R + T+ ++L + AL G+ +H + +
Sbjct: 274 YAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELED 333
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
++ V +++ MY KCG ++ AR FD + + SWT M++GY G EA+++F+ M
Sbjct: 334 NLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMI 393
Query: 338 AAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G P+ +T +S+++ C +G L+ G WF+ C ++ + + ++D+ + G +
Sbjct: 394 RCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYL 453
Query: 397 GDARELFYAL---PEKIVVSWTTMIAGCALN 424
+A L + P+ IV W +++ C ++
Sbjct: 454 KEAYGLIQEMKVKPDFIV--WGSLLGACRIH 482
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 304/607 (50%), Gaps = 23/607 (3%)
Query: 41 LFRQMKQND--IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-----SPFVK------ 87
LFRQM ++ P+++TF + C +H VK +PF+
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191
Query: 88 ---CD--RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
C+ RLD A +F+E+ +D ++N ++ G+ + G + LF MR G Q
Sbjct: 192 KSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDF 251
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T G+ +A + +L + +H+ + G D SV N + Y+K D + ++F +
Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E VS+N +++ + D+++ SL+F+R M GF ++LS +L
Sbjct: 312 PEL--DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H + D + V N+L+ MY+KC + A ++F + RT VSWTA+ISGY Q
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
KG L+LF M + D T +++ +L LGK + G +NV
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+ L+DMY+KCGSI DA ++F +P++ VSW +I+ A NG+ A+ F +++E L
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+P+ V+ L VL AC+H GF+E+G GI+ P+ HY+CM DLLGR G+ E
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT--PKKKHYACMLDLLGRNGRFAE 607
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP-HSAAPYVEMANKYA 561
A + MP + D +W ++L AC+IH N + E A LF +E AA YV M+N YA
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYA 667
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
G W+ V +++ M+ +KK P S +N K F++ D+ H + ++ L
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Query: 622 HSREEAY 628
E Y
Sbjct: 728 EIEREGY 734
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 224/495 (45%), Gaps = 23/495 (4%)
Query: 71 IYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+Y +M H + V S VK + A +FD M R V +W ++ +A+ +
Sbjct: 70 VYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEA 129
Query: 126 LRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD--VSVCNT 181
+LF M D VT L A + + VH+F + +G D + ++V N
Sbjct: 130 FKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNV 189
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ SY + L +A ++F I E + V++N+++ G + +S++ + M +G +
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T +L + V G+ +H+ + GF D SV N ++ YSK + R+L
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + VS+ +IS Y+Q + +L F M+ G +M+S +L
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
++G+ A + V N+L+DMY+KC +A +F +LP++ VSWT +I+G
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
G L LF ++ +LR ++ TF VL+A L G + I +
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF------IIRS 481
Query: 482 PELDHY---SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE--IGE 536
L++ S + D+ + G +K+A+ + MP + +A W L+ A + + E IG
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGA 540
Query: 537 YVAYCLFKLEPHSAA 551
+ L+P S +
Sbjct: 541 FAKMIESGLQPDSVS 555
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV-IN 283
F D+ ++ GF D + S+F+ + L +G++ + ++ +V N
Sbjct: 29 FLDTRRVDARIIKTGFDTD-----TCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTN 83
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGE 341
T+IS + K GD+ SAR LFD + DRT V+WT ++ YA+ DEA +LF M ++
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGDA 399
LPD VT +++ GC + +A G N + V N L+ Y + + A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
LF +PEK V++ T+I G +G + E++ LF ++ + +P+ TF VL+A
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
Length = 992
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 305/582 (52%), Gaps = 21/582 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + N+ + + R+M+ ++P+ LT + C DL + IH + V
Sbjct: 413 WNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAV 472
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + C +L K+F M VR + SWN ++ GFA+ G LR
Sbjct: 473 RSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLR 532
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F MRL +Q D VT++ L + + +++ +SVHS I G + DVSV N I+ Y
Sbjct: 533 FFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYT 592
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
C ++ E +F + +S+N+++ G + F + L + HM+ N + ++ T+
Sbjct: 593 NCGIIQAGEKLFDSLSSV--NTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITL 650
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL +C L QG+ VHS+ I L+ S+ + I MYS+ +++ LF + +
Sbjct: 651 LNLLP--ICHSQL-QGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGE 707
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R + W A++S Q A F ++ D VT+L++IS C Q G +L +
Sbjct: 708 RNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECV 767
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A G ++V NALIDM+S+CGSI AR++F EK VSW+TMI +++G+
Sbjct: 768 TAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDG 827
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
ALDLF ++ ++P+ +TF++VL AC+ +GFLE+G + D GI+ P ++HY
Sbjct: 828 GSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGIT--PRMEHY 885
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DLLGR G L EA D V +MP + + +LL AC+ H N ++GE V L + +
Sbjct: 886 ACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDH 945
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
+ YV ++N YA G+W +R+ M+ + K G SL
Sbjct: 946 GNPRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVSL 987
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 221/435 (50%), Gaps = 19/435 (4%)
Query: 36 HKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP---------- 84
H+ LL L+R++ +N TFP + +ACA +S L + +H +V++
Sbjct: 125 HRELLGLYREVCA--FGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTA 182
Query: 85 ----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ K ++D + ++FD M RD+ SWNAM+ G++ G L M+ G + +
Sbjct: 183 LLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPN 242
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
+++G+ +H+F + GV D SV +IS YA L + +F
Sbjct: 243 ASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLF- 301
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ + +VS NSM++ C ++ + +R M G ++ TVVS+L +
Sbjct: 302 -HQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGI 360
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G VH I +G VSV++ L+SMYSK GD+DSA LF + +++++ W ++ISGY
Sbjct: 361 NHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGY 420
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+ + M+ G PD +TV+S+IS C + L +GK YA L+ N
Sbjct: 421 LVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNE 480
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V NAL+ MY+ CG + +LF+ + + ++SW T+I+G A NG+ V L F Q+
Sbjct: 481 SVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLA 540
Query: 441 DLRPNRVTFLAVLQA 455
D++ + VT +A++ +
Sbjct: 541 DMQFDLVTLIALISS 555
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 206/429 (48%), Gaps = 16/429 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVK 87
+QM+Q+ PN + I + L +H +KS +
Sbjct: 231 LKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAA 290
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
L + +F + V ++ S N+M+ Q G E +F MR G+ + VTV+ +
Sbjct: 291 FGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSI 350
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+ ++ +SVH I G+ VSV + +S Y+K DL A +F + E+ +
Sbjct: 351 LPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQ 410
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+ WNS+++G +K++ + R M G D TV+S++S E L G+ +H
Sbjct: 411 LL--WNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIH 468
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
++ + +L+ SV+N L++MY+ CG + LF + RT +SW +ISG+A+ GD
Sbjct: 469 AYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSV 528
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
LR F M A DLVT++++IS + +G+ + A G +V V NALI
Sbjct: 529 ACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALI 588
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
MY+ CG I +LF +L +S+ ++ G N F E L LF+ +++ D +PN +
Sbjct: 589 TMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNII 648
Query: 448 TFLAVLQAC 456
T L +L C
Sbjct: 649 TLLNLLPIC 657
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 4/364 (1%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+V N + F+ GF +L L+ + G +D T + +A L L K VH
Sbjct: 108 EVYDLNIAVRCFSDHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVH 165
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ G +V V + YAK + ++ VF G++ R ++SWN+M++G +
Sbjct: 166 CRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSR--DLISWNAMISGYSLNGC 223
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
++ + M +GFR + +++V ++S G +H+ + G D SV
Sbjct: 224 LLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPA 283
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
ISMY+ G + S+ LF VS +MIS Q G ++A +F M G +P+
Sbjct: 284 FISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPN 343
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
LVTV+S++ C + G+ GL + V V +AL+ MYSK G + A LF
Sbjct: 344 LVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFS 403
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
++ EK + W ++I+G +N ++ + ++ + P+ +T ++V+ C HT L
Sbjct: 404 SVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHV 463
Query: 465 GWAI 468
G +I
Sbjct: 464 GKSI 467
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 16/300 (5%)
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
L YR + F D T ++ + L G+ VH + G +V V L+ M
Sbjct: 129 LGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDM 186
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD---L 345
Y+K G +D +R +FDG+ R +SW AMISGY+ G L EA M+ G P+ L
Sbjct: 187 YAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSL 246
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
V ++SM+SG G A G +A G+ + V A I MY+ G + + LF+
Sbjct: 247 VGIVSMVSGLGVRDA---GDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQ 303
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+VS +MI+ C +G + +A +F + L PN VT +++L C++ + G
Sbjct: 304 SLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHG 363
Query: 466 WAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
++ +I++ G++ ++ S + + + G L A+ S+ KS +W +L+
Sbjct: 364 ESVHGMVIKF---GLA--EQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQL-LWNSLI 417
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 309/614 (50%), Gaps = 22/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V +E L LF++M++ I + + + ++CA LS L +H H +
Sbjct: 245 WSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHAL 304
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA--QMGFLENV 125
K F KC L A +IF+ + + +NA++VG + GF
Sbjct: 305 KCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGF--EA 362
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L+ F + G+ + +++ G A K + +HS + + +++ V N+ +
Sbjct: 363 LQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDM 422
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC+ L A +F +E R VSWN+++A +++LN + M+ D
Sbjct: 423 YGKCEALSEACCMFDEMERR--DAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQF 480
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L + +AL G +H+ I G LD V LI MY KCG I+ A+ + D I
Sbjct: 481 TYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRI 540
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+T VSW A+I+G+ ++A F+ M PD T ++ C ++ LGK
Sbjct: 541 EQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGK 600
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
L +V + + L+DMYSKCG++ D+ +F P K V+W MI G A +G
Sbjct: 601 QIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHG 660
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL F ++ ++RPN TF+++L+AC H GF++KG + G+ P+++
Sbjct: 661 LGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGL--EPQIE 718
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HYSCM D++GR G++ EAL +Q MP ++DA IW TLL CKIH NIEI E + +L
Sbjct: 719 HYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQL 778
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP ++ + ++N YA G W V+ +R MM+ N++KK PG S + + F ++
Sbjct: 779 EPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKT 838
Query: 606 HAESELTYPVLDCL 619
H E Y +L L
Sbjct: 839 HPRYEEIYKILSVL 852
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/525 (25%), Positives = 248/525 (47%), Gaps = 25/525 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS + + E K++ +F M + ++ + TF + KAC+ L D +HG I
Sbjct: 143 WNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLI 202
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ F KC RLD + KIF E+ V++ W+A++ G Q L
Sbjct: 203 VRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGL 262
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M+ VGI + ++ L + +H+ + +D++V + Y
Sbjct: 263 ELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMY 322
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC L A+ +F + + ++ +N+++ GC +K ++L F++ ++ +G + +
Sbjct: 323 AKCGSLADAQRIFNSLPK--HSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S+ + + GR +HS + ++ V N+++ MY KC + A +FD +
Sbjct: 381 LSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME 440
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R VSW A+I+ + Q G+ +E L LF +M PD T S++ C AL G
Sbjct: 441 RRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGME 500
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
N GL + V ALIDMY KCG I +A+++ + ++ +VSW +IAG L
Sbjct: 501 IHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKH 560
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
+A F++++++ ++P+ T+ VL AC + + G I II+ + + ++
Sbjct: 561 SEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIK-----LELHSDV 615
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G ++++ + P K D W ++C H
Sbjct: 616 YITSTLVDMYSKCGNMQDSALVFEKAPNK-DFVTWNAMICGYAQH 659
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 219/499 (43%), Gaps = 55/499 (11%)
Query: 23 NSQIREAVNKNEAHKTLLLFR-------QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S +R ++ +KTL +F Q Q + TF I + C+ + L +
Sbjct: 5 TSSLRLIASRILYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQ 64
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H ++ S F+ +C L+ AYK+F++M+ RDV S+N M+ G+A G
Sbjct: 65 AHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGE 124
Query: 122 LENVLRLFY----------NMRLVGI--------QADFVTVMGLTQA--------AIHAK 155
+ FY N L G D MG ++ A+ K
Sbjct: 125 MNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLK 184
Query: 156 HLSLLK------SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
S+L+ VH + +G DV + + YAKC L + +F I ++
Sbjct: 185 ACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIP--VKNW 242
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V W++++AGC D+ L ++ M G + + S+ S AL G +H+H
Sbjct: 243 VCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAH 302
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ F D++V + MY+KCG + A+ +F+ + + + A+I G + EA
Sbjct: 303 ALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEA 362
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L+ F + +G + +++ S C G+ + + L+ N+ V N+++DM
Sbjct: 363 LQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDM 422
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KC ++ +A +F + + VSW +IA NG E L+LF ++ L + P++ T+
Sbjct: 423 YGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTY 482
Query: 450 LAVLQACTHTGFLEKGWAI 468
+VL+AC+ L G I
Sbjct: 483 GSVLKACSSQQALNSGMEI 501
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 168/371 (45%), Gaps = 52/371 (14%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
+L G+ H+ I GF DV + N L+ MY +C ++ A +F+ + R +S+ MIS
Sbjct: 58 SLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMIS 117
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA--------LELGK----W 366
GYA G+++ A F+ D+V+ SM+SG Q+G L++G+
Sbjct: 118 GYADAGEMNLANEFFYDTPK----RDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVG 173
Query: 367 FDNY-------ACS----GGLK-------------DNVMVCNALIDMYSKCGSIGDAREL 402
FD ACS GGL +V+ +AL+DMY+KC + D+ ++
Sbjct: 174 FDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKI 233
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F +P K V W+ +IAGC N E + L+LF ++ ++ + ++ + +V ++C L
Sbjct: 234 FSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSAL 293
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
+ G + + + ++ + D+ + G L +A S+P K + +
Sbjct: 294 KVG---TQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP-KHSLQCYNAI 349
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
+ C + E G + A F+L S + N+ +L G + A+I+ + Q+
Sbjct: 350 IVGC---VRNEKG-FEALQFFQLLLKSGLGF----NEISLSGAFSACASIKGDLDGRQLH 401
Query: 583 KFPGQSLFHIN 593
+S N
Sbjct: 402 SLSVKSTLRSN 412
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 202/659 (30%), Positives = 341/659 (51%), Gaps = 60/659 (9%)
Query: 5 SLPPRLNRIY-----RSSTINQWNSQIR---EAVNKNEAHKTLLLFRQMKQNDIEPNNLT 56
SL P ++++ ++ + WN I A N +E + LF M + + P+ T
Sbjct: 31 SLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRT 88
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMA 102
FP + KAC + D IH +K F+ + + A +FDEM
Sbjct: 89 FPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP 145
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
VRD+ SWNAM+ G+ Q G + L L +R + D VTV+ L A A + +
Sbjct: 146 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT 201
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+HS+ I G+++++ L+ + VF + +R ++SWNS++
Sbjct: 202 IHSYSIKHGLESEL---------------LRDCQKVFDRM--YVRDLISWNSIIKAYELN 244
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSV 281
++ +++ ++ M + + D T++SL S + R V + G+ L D+++
Sbjct: 245 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 304
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
N ++ MY+K G +DSAR +F+ + + +SW +ISGYAQ G EA+ ++ ME GE
Sbjct: 305 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 364
Query: 342 LP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
+ + T +S++ C Q+GAL G GL +V V +L DMY KCG + DA
Sbjct: 365 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 424
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
LFY +P V W T+IA +G +A+ LF ++++ ++P+ +TF+ +L AC+H+G
Sbjct: 425 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 484
Query: 461 FLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
+++G W ++Q D GI+ P L HY CM D+ GR G+L+ AL F++SM ++ DA IW
Sbjct: 485 LVDEGQWCFEMMQ-TDYGIT--PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIW 541
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
G LL AC++H N+++G+ + LF++EP +V ++N YA G+W+GV IR++
Sbjct: 542 GALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGK 601
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
++K PG S ++ K F ++ H E Y L L +A + ++P+H
Sbjct: 602 GLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL------QAKLKMIGYVPDH 654
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 183/593 (30%), Positives = 310/593 (52%), Gaps = 29/593 (4%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIH---------------GHIVKSPFVKCDRLDCAY 95
P+ TFP + K CA+L L + H G+ + + + + +D A
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHA 154
++FD M RDV +WN+M+ G+ G L F M + +Q D V ++ A
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
L + VH++ I G++ DV V + + Y KC D+ AE VF + R TVV+WN
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSR--TVVTWNC 282
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M+ G ++ +++ + + M G +++V T ++LL++ E+ + GR VH +
Sbjct: 283 MIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQ 342
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
F V + L+ MYSK G + S+ +F + +T VSW MI+ Y K EA+ LF
Sbjct: 343 FLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFL 402
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
+ PD T+ +++ G L + +Y G +N ++ NA++ MY++CG
Sbjct: 403 DLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCG 462
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ +RE+F + K V+SW TMI G A++G+ AL++F ++ LRPN TF++VL
Sbjct: 463 DVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLT 522
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
AC+ +G ++GW Q++ Y P+++HY CM DLLGR G LKE + F+++MPI
Sbjct: 523 ACSVSGLTDEGWT----QFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPI 578
Query: 513 KSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP-----HSAAPYVEMANKYALGGRWD 567
+WG+LL A + +I+I EY A +F+LE + YV +++ YA GRW
Sbjct: 579 DPTFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWK 638
Query: 568 GVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
V I+++M+ +++ +S+ ++G +C+F D H +S++ V + L+
Sbjct: 639 DVERIKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLS 691
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 212/447 (47%), Gaps = 18/447 (4%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
R+D A + RD N ++ G A G L + M G + D T + +
Sbjct: 57 RMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTFPVVLK 116
Query: 150 AAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
L ++ HS I +GV ADV N+ ++ YA+ + AE VF G+ R
Sbjct: 117 CCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPA--RD 174
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL--DVTTVVSLLSSFVCPEALVQGRLV 266
VV+WNSMV G +L +R M+ + D +++ L++ AL+QGR V
Sbjct: 175 VVTWNSMVDGYVSNGLGTLALVCFRE-MHEALEVQHDGVGIIAALAACCLESALMQGREV 233
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H++ I +G + DV V +++ MY KCGDI SA +F + RT V+W MI GYA
Sbjct: 234 HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERP 293
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EA F M+A G ++VT +++++ C Q+ + G+ Y +V++ AL
Sbjct: 294 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETAL 353
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
++MYSK G + + ++F + K +VSW MIA ++EA+ LF L+ L P+
Sbjct: 354 LEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDY 413
Query: 447 VTFLAVLQACTHTGFLEKGWAIS--IIQ--YDDKGISYNPELDHYSCMADLLGRKGKLKE 502
T AV+ A G L + + II+ Y + + N + Y+ D+L +E
Sbjct: 414 FTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSS----RE 469
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIH 529
D + + + S W T++ IH
Sbjct: 470 IFDKMAAKDVIS----WNTMIMGYAIH 492
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 137/330 (41%), Gaps = 18/330 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S T+ WN I + F QMK + +T + ACA+ +Y +
Sbjct: 274 SRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRS 333
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG+I + F+ K ++ + K+F +M + + SWN M+ +
Sbjct: 334 VHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEM 393
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ LF ++ + D+ T+ + A + L + +HS+ I +G + + N
Sbjct: 394 YMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNA 453
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YA+C D+ + +F + + V+SWN+M+ G + +L + M NG R
Sbjct: 454 IMHMYARCGDVLSSREIFDKMAA--KDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLR 511
Query: 242 LDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ +T VS+L++ +G +S YG + + + + GD+
Sbjct: 512 PNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQ 571
Query: 301 LFDGI-CDRTRVSWTAMISGYAQKGDLDEA 329
+ + D T W ++++ + D+D A
Sbjct: 572 FIENMPIDPTFRVWGSLLTASRNRNDIDIA 601
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+L+ ++ G +D A+ R +I G A G AL + AM AAG
Sbjct: 46 KSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGAR 105
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARE 401
PD T ++ C + GAL+ G+ + A G+ +V N+L+ Y++ G + DA
Sbjct: 106 PDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAER 165
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME-LDLRPNRVTFLAVLQACTHTG 460
+F +P + VV+W +M+ G NG AL F ++ E L+++ + V +A L AC
Sbjct: 166 VFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLES 225
Query: 461 FLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
L +G + +I++ G+ ++ ++ + + D+ + G + A +MP ++
Sbjct: 226 ALMQGREVHAYVIRH---GMEHDVKVG--TSILDMYCKCGDIASAEGVFATMPSRT 276
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 194/626 (30%), Positives = 304/626 (48%), Gaps = 27/626 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
WN+ I + L LF++M+ + P +T CAK+
Sbjct: 196 WNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESG 255
Query: 71 IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+ ++ + S + + LD A ++FD A RDV SWNAML +AQ G + LF
Sbjct: 256 LEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFA 315
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M GI VT L A+ L + +H+ + G+D D+ + N + Y +C
Sbjct: 316 RMLHEGIPPSKVT---LVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCG 372
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
+ A +F GI VSWN+M+AG + + +L ++ M G T ++L
Sbjct: 373 SPEEARHLFEGIPG---NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNL 429
Query: 251 LSSFVC-PE---ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
L + PE A+ +GR +HS + G+ + ++ ++ MY+ CG ID A F
Sbjct: 430 LEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGA 489
Query: 307 DRTR---VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
R VSW A+IS +Q G AL F M+ G P+ +T ++++ C + AL
Sbjct: 490 MEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTE 549
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCA 422
G ++ G++ NV V AL MY +CGS+ ARE+F + E+ VV + MIA +
Sbjct: 550 GVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYS 609
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
NG EAL LF ++ + RP+ +F++VL AC+H G ++GW I GI+ P
Sbjct: 610 QNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIA--P 667
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
DHY+C D+LGR G L +A + ++ M +K +W TLL AC+ + +++ G +
Sbjct: 668 SEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMV 727
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
+L+P + YV ++N A G+WD A +RT M+ ++K G+S I + F A
Sbjct: 728 RELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAG 787
Query: 603 DRYHAESELTYPVLDCLALHSREEAY 628
DR H SE Y L+ L RE Y
Sbjct: 788 DRSHPRSEEIYRELERLHAEIREIGY 813
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 206/391 (52%), Gaps = 11/391 (2%)
Query: 65 AKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
A++ L + + H+++ ++KC+ L ++F + VRD ASW ++ + + G +
Sbjct: 53 ARIVSLGLEEELGNHLLR-LYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKR 111
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ +F+ M+ G++ D VT + + +A LS +S+H++ + G++ + N +
Sbjct: 112 AIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLH 171
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y C + A L+F +E R +VSWN+ +A D +L ++ M G R
Sbjct: 172 IYGSCGCVASAMLLFERME---RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPAR 228
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+V LS VC + + Q R +HS G + + V L S Y++ G +D A+ +FD
Sbjct: 229 ITLVITLS--VCAK-IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDR 285
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+R VSW AM+ YAQ G + EA LF M G P VT+++ +GC +L G
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC---SSLRFG 342
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ A GL ++++ NAL+DMY++CGS +AR LF +P VSW TMIAG +
Sbjct: 343 RMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGN-AVSWNTMIAGSSQK 401
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
G+ AL+LF ++ + P R T+L +L+A
Sbjct: 402 GQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 259/528 (49%), Gaps = 40/528 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I +A + + +F +M+Q + + +TF + KACA+L DL + IH IV
Sbjct: 96 WTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIV 155
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + C + A +F+ M RD+ SWNA + AQ G L+ L
Sbjct: 156 ESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALE 214
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+L G++ +T+ + ++ AK + +++HS G++ + V S+YA
Sbjct: 215 LFQRMQLEGVRPARITL--VITLSVCAK-IRQARAIHSIVRESGLEQTLVVSTALASAYA 271
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ L A+ VF E R VVSWN+M+ ++ + M++ G +
Sbjct: 272 RLGHLDQAKEVFDRAAE--RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGI---PPSK 326
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V+L+++ +L GR++H+ + G D D+ + N L+ MY++CG + AR LF+GI
Sbjct: 327 VTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG 386
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG----QSGALEL 363
VSW MI+G +QKG + AL LF M+ G P T L+++ ++ A+
Sbjct: 387 NA-VSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY--ALPEK-IVVSWTTMIAG 420
G+ + S G + A++ MY+ CG+I +A F A+ ++ VVSW +I+
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD---DKG 477
+ +G AL F ++ + PN++T +AVL AC L +G +I +D G
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG----VIVHDHLRHSG 561
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ N + + +A + GR G L+ A + + + ++ D I+ ++ A
Sbjct: 562 MESNVFV--ATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+V LL + L QGR +H+ + G + ++ N L+ +Y KC + +F +
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLE 89
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R SWT +I+ Y + G A+ +F M+ G D VT L+++ C + G L G+
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ GL+ ++ N L+ +Y CG + A LF + E+ +VSW IA A +G+
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGD 208
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
AL+LF ++ +RP R+T + L C
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCA 239
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 324/651 (49%), Gaps = 57/651 (8%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S I +WN I + ++ L +F++M + + + N + ++ +L+ ++ +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 76 -----IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+ +++ +V+ L A ++F+ M RDV SWN ML G+AQ G +++ +F
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIGVDADVSVCNTWISSY 186
M + + V+ L A + + L KS ++ + VS N + +
Sbjct: 182 RM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL-------VS-WNCLLGGF 229
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
K + A F + +R VVSWN+++ G K D++ R + DV T
Sbjct: 230 VKKKKIVEARQFFDSMN--VRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFT 283
Query: 247 VVSLLSSFVCPEALVQGR-----LVHSHGIHYG------------------FDL----DV 279
+++S ++ + + R + + + + FD+ +V
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
S NT+I+ Y++CG I A+ LFD + R VSW AMI+GY+Q G EALRLF ME
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G + + S +S C ALELGK GG + V NAL+ MY KCGSI +A
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+LF + K +VSW TMIAG + +G AL F + L+P+ T +AVL AC+HT
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G ++KG D G+ P HY+CM DLLGR G L++A + +++MP + DA IW
Sbjct: 524 GLVDKGRQYFYTMTQDYGVM--PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
GTLL A ++H N E+ E A +F +EP ++ YV ++N YA GRW V +R M+
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
VKK PG S I KT TF+ D +H E + + L+ L L ++ Y S
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 51/248 (20%)
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D D+ N IS Y + G + A +F + + VS+ MISGY + G+ + A +LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF-- 118
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
E+P+ +L W N +I Y + +
Sbjct: 119 ----DEMPE----------------RDLVSW-----------------NVMIKGYVRNRN 141
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+G ARELF +PE+ V SW TM++G A NG +A +F ++ E N V++ A+L A
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSA 197
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
+E+ + + + +S+N C+ +K K+ EA F SM ++ D
Sbjct: 198 YVQNSKMEEACMLFKSRENWALVSWN-------CLLGGFVKKKKIVEARQFFDSMNVR-D 249
Query: 516 AGIWGTLL 523
W T++
Sbjct: 250 VVSWNTII 257
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 314/600 (52%), Gaps = 15/600 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY--------- 72
W + I + + +F+QM+++ I+P ++T + +KL L+
Sbjct: 118 WTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHG 177
Query: 73 --SQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
S + + + + + KC R+ A ++F + RD+ SWN++L ++++G E +L+L
Sbjct: 178 FESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQ 237
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M++ I+ D T A+ L L K VH + G++ D V + + Y +C
Sbjct: 238 AMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCR 297
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
L A VF E+ VV W +M++G D D +L + M+ + + T+ S
Sbjct: 298 CLDPAYKVFKSTTEK--DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASG 355
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L++ G +H + + G LD+ N+L++MY+KC + + +F+ + ++
Sbjct: 356 LAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDL 415
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW A+++G+A+ G L + + F M + PD +TV S++ CG +GAL GKW N+
Sbjct: 416 VSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNF 475
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
L +M AL+DMY KCG++ +A++ F + ++ +V+W+T+I G NG+ A
Sbjct: 476 VLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
L + + + + PN V F++VL AC+H G + KG +SI + K +P L+H +C+
Sbjct: 536 LRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKG--LSIYESMTKDFRMSPNLEHRACV 593
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSA 550
DLL R GK+ EA F + M + + G LL AC+++ +E+G+ +A +F+L+P
Sbjct: 594 VDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDP 653
Query: 551 APYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
+V++AN YA RWDGV T M+ +KK+PG S ++G T TF A H + E
Sbjct: 654 GNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIE 713
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 254/544 (46%), Gaps = 27/544 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS + + H+ L + M++ + + TFP + KAC L+ + +H +V
Sbjct: 17 FNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVV 76
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S + K + K+FD M R+V W ++ +++ G ++
Sbjct: 77 VNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFS 136
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR GIQ VT++ L L LL +H I G ++D+++ N+ ++ Y
Sbjct: 137 MFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMYG 193
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F I+ R +VSWNS+++ + ++ L + M + D T
Sbjct: 194 KCGRIADARRLFQSID--CRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S LS+ L G+LVH + G ++D V + L+ +Y +C +D A +F +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V WTAMISG Q D+AL +F+ M + P T+ S ++ C Q G ++G
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y G+ ++ N+L+ MY+KC + + +F + EK +VSW ++AG A NG
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDH 486
+ + F+++ + LRP+ +T ++LQAC G L +G W + + S P +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS----SLIPCIMT 487
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG--EYVAYCLFK 544
+ + D+ + G L+ A M ++ D W TL+ + EI +Y +
Sbjct: 488 ETALVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTG 546
Query: 545 LEPH 548
+EP+
Sbjct: 547 MEPN 550
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 209/473 (44%), Gaps = 32/473 (6%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WNS + + L L + MK DI+P+ TF A A DL +++HG
Sbjct: 213 IVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHG 272
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
++K +++C LD AYK+F +DV W AM+ G Q +
Sbjct: 273 LMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADK 332
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L +FY M ++ T+ A + S+H + + G+ D+ N+ ++
Sbjct: 333 ALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVT 392
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC+ L+ + +F + E + +VSWN++VAG + F+ M + R D
Sbjct: 393 MYAKCNKLQQSCSIFNKMVE--KDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDS 450
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TV SLL + AL QG+ +H+ + + L+ MY KCG++++A+ FD
Sbjct: 451 ITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDC 510
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R V+W+ +I GY G + ALR + G P+ V +S++S C G + G
Sbjct: 511 MLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKG 570
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCA 422
+++ + N+ ++D+ S+ G + +A + + E +V ++ C
Sbjct: 571 LSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACR 630
Query: 423 LNGEF----VEALDLFHQLMELDLRP----NRVTFLAVLQACTHTGFLEKGWA 467
+NG V A D+F +L+P N V + + +EK W
Sbjct: 631 VNGRVELGKVIARDMF------ELKPVDPGNFVQLANSYASMSRWDGVEKAWT 677
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 184/372 (49%), Gaps = 5/372 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
I + +A S+N+++ + G VL+ + +M+ Q D T L +A +
Sbjct: 5 IHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNL 64
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
S S+H + G+ D + ++ IS YAK + + VF + + R VV W +++
Sbjct: 65 FSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLK--RNVVPWTTII 122
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ D + + ++ M +G + T++SLL L +H I +GF+
Sbjct: 123 GSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGI---SKLPLLLCLHCLIILHGFE 179
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
D+++ N++++MY KCG I AR LF I R VSW +++S Y++ G +E L+L AM
Sbjct: 180 SDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAM 239
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ PD T S +S G L LGK GL + V +AL+ +Y +C +
Sbjct: 240 KIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCL 299
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
A ++F + EK VV WT MI+G N +AL +F+Q++E +++P+ T + L AC
Sbjct: 300 DPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAAC 359
Query: 457 THTGFLEKGWAI 468
G + G +I
Sbjct: 360 AQLGCCDIGASI 371
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 189/629 (30%), Positives = 306/629 (48%), Gaps = 25/629 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ W I N + LF M ++ + P+++T + + + +H
Sbjct: 103 SVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVH 162
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
GH+VK + K L A +F MA +D ++NA+L G+++ GF
Sbjct: 163 GHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNH 222
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ + LF+ M+ +G + T + A I + + VHSF + +V V N +
Sbjct: 223 DAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALL 282
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+K D + A +F + E +S+N ++ C + + ++SL +R + + F
Sbjct: 283 DFYSKHDRIVEARKLFYEMPEV--DGISYNVLITCCAWNGRVEESLELFRELQFTRFDRR 340
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+LLS L GR +HS I +V V N+L+ MY+KC A +F
Sbjct: 341 QFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFA 400
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ ++ V WTA+ISGY QKG ++ L+LF M A D T S++ C +L L
Sbjct: 401 DLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTL 460
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK + G NV +AL+DMY+KCGSI +A ++F +P + VSW +I+ A
Sbjct: 461 GKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQ 520
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD---KGISY 480
NG+ AL F Q++ L+PN V+FL++L AC+H G +E+G +QY + +
Sbjct: 521 NGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEG-----LQYFNSMTQVYKL 575
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P +HY+ M D+L R G+ EA + MP + D +W ++L +C+IH N E+ A
Sbjct: 576 EPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAAD 635
Query: 541 CLFKLEP-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF ++ AAPYV M+N YA G WD V ++ ++ ++K P S I KT F
Sbjct: 636 QLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVF 695
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAY 628
+A D H +++ LD L E+ Y
Sbjct: 696 SANDTSHPQTKEITRKLDELEKQMEEQGY 724
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 20/493 (4%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDL-----IYSQMIHGHIVKSP-----FVKCDRLDCA 94
M + +PN F F + + DL ++ +M H +++ + ++K L A
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTA 92
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+FD M R V +W ++ G+AQ LF +M G+ D +T+ L
Sbjct: 93 RSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEF 152
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
+ ++ + VH + +G D+ + VCN+ + SY K L +A +F + E + V++N+
Sbjct: 153 ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE--KDNVTFNA 210
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++ G + D++N + M GFR T ++L++ + + + G+ VHS +
Sbjct: 211 LLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCN 270
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
F +V V N L+ YSK I AR LF + + +S+ +I+ A G ++E+L LF
Sbjct: 271 FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFR 330
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
++ +++S S LE+G+ + A V+V N+L+DMY+KC
Sbjct: 331 ELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCD 390
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
G+A +F L + V WT +I+G G + L LF ++ + + T+ ++L+
Sbjct: 391 KFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILR 450
Query: 455 ACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
AC + L G + II+ G N + S + D+ + G +KEAL Q MP+
Sbjct: 451 ACANLASLTLGKQLHSRIIR---SGCLSN--VFSGSALVDMYAKCGSIKEALQMFQEMPV 505
Query: 513 KSDAGIWGTLLCA 525
++ W L+ A
Sbjct: 506 RNSVS-WNALISA 517
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 310/612 (50%), Gaps = 19/612 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I+ + N+ + R+M E N T I +AC L +L+ + IHG ++
Sbjct: 147 WTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVI 206
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + +C L A K++ +A +DV N M+ + + G E +
Sbjct: 207 KRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIG 266
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F ++ G++ + T + A + +L+ +H I G ++SV N +S Y
Sbjct: 267 VFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYV 326
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L+ AE FCG+ ER +VSW ++++G +L + ++ G D
Sbjct: 327 KHGMLEEAEKSFCGMGER--NLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCF 384
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+LL + L G +H + G+ DVSV LI +Y+KC + SAR++F + D
Sbjct: 385 ATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLD 444
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VS+ A++SGY D ++A+ LF + A PD VT ++S L GK
Sbjct: 445 KNIVSFNAILSGYI-GADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCL 503
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y G + N V NA+I MY+KCGSIGDA +LFY++ +SW +I+ AL+G+
Sbjct: 504 HAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQG 563
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+AL LF ++ + + P+ +T L+VLQAC+++G LE+G+ + GI PE++H+
Sbjct: 564 RKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGI--KPEIEHF 621
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DLLGR G L EA+ F+ P +W TL+ CK+H ++ G+ + L L P
Sbjct: 622 ACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAP 681
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
A Y+ ++N YA GG + A +RT+M +V K G S I+ K F A D+ H
Sbjct: 682 EEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASDKDHP 741
Query: 608 ESELTYPVLDCL 619
ES+ Y LD L
Sbjct: 742 ESKEIYAKLDLL 753
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 252/538 (46%), Gaps = 43/538 (7%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
++ N + + N H +++ +D P +P + + DL+ Q
Sbjct: 42 NTGFNSYPGHNAQDPNSKTTHSSMVYCNS--DSDQNPLFNDWPQLLQISIGSGDLMLGQA 99
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH + K + + K ++L A +FDEM VR+ +W ++ G Q+
Sbjct: 100 IHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVND 159
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+E+V R+ M VG + + T + QA ++L + +H F I G D DV V +
Sbjct: 160 VESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTS 219
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV-----AGCTYGDKFDDSLNFYRHMM 236
IS Y++C DL AE V+ + + V N M+ AGC G+K ++ + H++
Sbjct: 220 LISMYSRCGDLGAAEKVYSNLA--YKDVRCLNFMISEYGKAGC--GEK---AIGVFLHLL 272
Query: 237 YNGFRLD---VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
+G + T V+S + + E L R++H I G ++SV N ++S+Y K G
Sbjct: 273 GSGLEPNDYTFTNVISACNGDIDVEVL---RVLHGMCIKCGCGDEISVGNAIVSVYVKHG 329
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
++ A F G+ +R VSWTA++SGY + G+ +AL F + G D +++
Sbjct: 330 MLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLD 389
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
GC + L LG + G +V V ALID+Y+KC + AR +F++L +K +VS
Sbjct: 390 GCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVS 449
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--II 471
+ +++G + + +A+ LF QL D++P+ VTF +L L KG + II
Sbjct: 450 FNAILSG-YIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYII 508
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G NP + + + + + G + +A SM D+ W ++ A +H
Sbjct: 509 K---TGFEANPSVGN--AVITMYAKCGSIGDACQLFYSMNYL-DSISWNAVISAYALH 560
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 205/649 (31%), Positives = 319/649 (49%), Gaps = 67/649 (10%)
Query: 47 QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP-----------FVKC-----DR 90
N+ + N T P + CA L + +H H++++ F C
Sbjct: 23 NNEQKSNPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACALSSPSS 79
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQ-----MGFLENVLRLFYNMRLVGIQADFVTVM 145
LD A K+FD++ ++ +WN ++ FA G L + L + R + T
Sbjct: 80 LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRF----PNSYTFP 135
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ +AA L +++H + +D+ + N+ I Y+ DL A LVF I E+
Sbjct: 136 FVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEK 195
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+VSWNSM++G G +++L ++ M R + T+V +LS+ L GR
Sbjct: 196 --DIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRW 253
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+ G D+++ + N ++ MY KCG ++ AR LFD + ++ VSWT MI GYA+ GD
Sbjct: 254 ACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGD 313
Query: 326 LDEALRLFFAM----------------------EAAG---EL-------PDLVTVLSMIS 353
D A R+F M EA EL P+ VT+ S ++
Sbjct: 314 YDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLA 373
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C Q GA++LG W Y G+K N + +LIDMYSKCG + A E+FY++ + V
Sbjct: 374 ACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFV 433
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W+ MIAG A++G A+DLF ++ E ++PN VTF +L AC+H+G +++G
Sbjct: 434 WSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMR 493
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
G+ P HY+CM D+LGR G L+EA++ ++ MPI A +WG LL AC+I+ N+E
Sbjct: 494 PVYGVV--PGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVE 551
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+ E L + + ++ YV ++N YA G+WD V+ +R MK + ++K PG S +N
Sbjct: 552 LAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVN 611
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY---SSHLKWIPEHE 639
G F D H S Y LD + + Y SHL E E
Sbjct: 612 GIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEE 660
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 213/473 (45%), Gaps = 59/473 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ IR + + + LL+F QM ++ PN+ TFPF+ KA ++S L+ Q IHG +
Sbjct: 98 WNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMV 157
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+K+ F LD AY +F ++ +D+ SWN+M+ GF Q G E L
Sbjct: 158 MKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEAL 217
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+LF M++ + + VT++G+ A L + + G+D ++ + N + Y
Sbjct: 218 QLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMY 277
Query: 187 AKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVA 217
KC L+ A +F +EE+ + +WN++++
Sbjct: 278 VKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALIS 337
Query: 218 GCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
K ++L +R + N + + T+ S L++ A+ G +H + G
Sbjct: 338 SYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIK 397
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
L+ + +LI MYSKCG ++ A +F + R W+AMI+G A G A+ LF M
Sbjct: 398 LNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKM 457
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDN-----YACSGGLKDNVMVCNALIDMYS 391
+ P+ VT +++ C SG ++ G+ F N Y G K ++D+
Sbjct: 458 QETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYA----CMVDILG 513
Query: 392 KCGSIGDARELFYALPEKIVVS---WTTMIAGCALNGEFVEALDLFHQLMELD 441
+ G + +A EL +P IV S W ++ C + G A +L+E D
Sbjct: 514 RAGCLEEAVELIEKMP--IVPSASVWGALLGACRIYGNVELAEMACSRLLETD 564
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 118/293 (40%), Gaps = 48/293 (16%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ---- 74
I WNS I V + L LF++MK + PN +T + ACAK DL + +
Sbjct: 197 IVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACD 256
Query: 75 ----------MIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+I + + +VKC L+ A ++FD+M +D+ SW M+ G+A++G +
Sbjct: 257 YIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDA 316
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS---------------------- 162
R+F M I A + Q + L++ +
Sbjct: 317 ARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACA 376
Query: 163 ----------VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+H + G+ + + + I Y+KC L+ A VF +E R V W
Sbjct: 377 QLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVER--RDVFVW 434
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
++M+AG +++ + M + + T +LL + + +GRL
Sbjct: 435 SAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRL 487
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 311/622 (50%), Gaps = 19/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + + EA + + F M + + + LTF + A L+ L + IHG ++
Sbjct: 903 WNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVM 962
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S +VK + A +F +M D+ SWN M+ G G E +
Sbjct: 963 RSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVG 1022
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F ++ + D TV + +A + L +H+ + GV D V I Y
Sbjct: 1023 MFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVY 1082
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+K ++ AE +F + + + SWN+++ G F +L Y M +G R D T
Sbjct: 1083 SKRGKMEEAEFLF--VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQIT 1140
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+V+ + L QG+ +H+ + GF+LD+ V + ++ MY KCG+++SAR +F I
Sbjct: 1141 LVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP 1200
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
V+WT MISG + G + AL + M + PD T +++ C ALE G+
Sbjct: 1201 SPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQ 1260
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ V +L+DMY+KCG+I DAR LF + + SW MI G A +G
Sbjct: 1261 IHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGN 1320
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EAL F + + P+RVTF+ VL AC+H+G + + + + GI PE++H
Sbjct: 1321 AKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIE--PEIEH 1378
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSC+ D L R G+++EA + SMP ++ A ++ TLL AC++ ++ E G+ VA L LE
Sbjct: 1379 YSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALE 1438
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P +A YV ++N YA +W+ VA+ R MM++ VKK PG S + K F A DR H
Sbjct: 1439 PSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSH 1498
Query: 607 AESELTYPVLDCLALHSREEAY 628
E+++ Y ++ + REE Y
Sbjct: 1499 EETDVIYNKVEYIMKRIREEGY 1520
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 219/522 (41%), Gaps = 51/522 (9%)
Query: 22 WNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ + A + +++H LFR ++++ + T + K C + S+ +HG+
Sbjct: 727 WNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYA 786
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + + K + A +FD MAVRDV WN M+ + +
Sbjct: 787 VKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAM 846
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISS 185
LF G + D VT+ L++ K++ LK ++ + + D D S
Sbjct: 847 LLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGS-------- 898
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
V+ WN ++ + ++++ + M+ + D
Sbjct: 899 ----------------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGL 936
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T V +L+ L G+ +H + G D VSV N LI+MY K G + AR +F +
Sbjct: 937 TFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQM 996
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ-SGALELG 364
+ +SW MISG G + ++ +F + LPD TV S++ C G L
Sbjct: 997 NEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLA 1056
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
A G+ + V ALID+YSK G + +A LF + SW ++ G ++
Sbjct: 1057 TQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVS 1116
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G+F +AL L+ + E R +++T + +A L++G I + +N +L
Sbjct: 1117 GDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKR---GFNLDL 1173
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
S + D+ + G+++ A +P D W T++ C
Sbjct: 1174 FVTSGVLDMYLKCGEMESARRVFSEIPSPDDVA-WTTMISGC 1214
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 207/466 (44%), Gaps = 53/466 (11%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEM- 101
F + +A A SDL + H I+ S + KC L A K+FD
Sbjct: 660 FSILRQAIAA-SDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 102 -AVRDVASWNAMLVGF-AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
RD+ +WNA+L A + LF +R + T+ + + + + S
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+S+H + + IG+ DV V ++ YAK ++ A ++F G+ +R VV WN M+
Sbjct: 779 SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA--VRDVVLWNVMMKAY 836
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+++ + GFR D T+ +L C + +++ + ++
Sbjct: 837 VDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYA--------- 887
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
T + MY D D + V+ W +S + Q+G+ EA+ F M +
Sbjct: 888 ----TKLFMY----DDDGSDVIV----------WNKALSRFLQRGEAWEAVDCFVDMINS 929
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
D +T + M++ LELGK GL V V N LI+MY K GS+ A
Sbjct: 930 RVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRA 989
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
R +F + E ++SW TMI+GC L+G ++ +F L+ L P++ T +VL+AC+
Sbjct: 990 RSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSS- 1048
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEA 503
LE G+ ++ Q + LD + + + D+ ++GK++EA
Sbjct: 1049 --LEGGYYLA-TQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEA 1091
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 158/389 (40%), Gaps = 44/389 (11%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ + AI A LSL K H+ + G D V N I+ YAKC L A +F +
Sbjct: 662 ILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN 721
Query: 207 RTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
R +V+WN++++ + DK D + +R + + T+ + + +
Sbjct: 722 RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASES 781
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H + + G DV V L+++Y+K G I ARVLFDG+ R V W M+ Y
Sbjct: 782 LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCL 841
Query: 326 LDEALRLFFAMEAAGELPDLVTV--LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
EA+ LF G PD VT+ LS + C + LEL K F YA
Sbjct: 842 EYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKC-KKNILEL-KQFKAYATK---------- 889
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ MY GS V+ W ++ GE EA+D F ++ +
Sbjct: 890 ---LFMYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVA 932
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY----SCMADLLGRKGK 499
+ +TF+ +L LE G I GI LD +C+ ++ + G
Sbjct: 933 CDGLTFVVMLTVVAGLNCLELGKQI-------HGIVMRSGLDQVVSVGNCLINMYVKAGS 985
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKI 528
+ A M + D W T++ C +
Sbjct: 986 VSRARSVFGQMN-EVDLISWNTMISGCTL 1013
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 121/269 (44%), Gaps = 20/269 (7%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L + L G+ H+ + G D V N LI+MY+KCG + SAR LFD D
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 309 TR--VSWTAMISGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R V+W A++S A D + LF + + T+ + C S + +
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
YA GL+ +V V AL+++Y+K G I +AR LF + + VV W M+
Sbjct: 781 SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840
Query: 426 EFVEALDLFHQLMELDLRPNRVTF--LAVLQACTHTGFLE----KGWAISIIQYDDKG-- 477
EA+ LF + RP+ VT L+ + C LE K +A + YDD G
Sbjct: 841 LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKN-ILELKQFKAYATKLFMYDDDGSD 899
Query: 478 -ISYNPELDHYSCMADLLGRKGKLKEALD 505
I +N L + ++G+ EA+D
Sbjct: 900 VIVWNKALSRFL-------QRGEAWEAVD 921
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/613 (31%), Positives = 312/613 (50%), Gaps = 56/613 (9%)
Query: 60 IAKACAKLSDL--IYSQMIHGHIVKSPFV-----------KCDRLDCAYKIFDEMAVRDV 106
I + C L L I +QM+ ++++ F + LD +I + +V
Sbjct: 63 ILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNV 122
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
SWNA + G+ + G +E L+ M L G ++ D T L + L V
Sbjct: 123 FSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLG 182
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ G + D+ V N I+ C +L +A VF + R+R +V+WNSM+ GC
Sbjct: 183 HVLKFGFECDIFVHNASITMLLSCGELSVAYDVFN--KSRVRDLVTWNSMITGCVKRGLA 240
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
+++ Y+ M R + T++ ++SS + L G+ H + +G + + + N L
Sbjct: 241 IEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNAL 300
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD------------------ 327
+ MY KCG++ +ARVLFD + +T VSWT M+ GYA+ G LD
Sbjct: 301 MDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWN 360
Query: 328 -------------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
EAL LF M+ PD VT+++ +S C Q GAL++G W +Y
Sbjct: 361 AIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERH 420
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
L +V + AL+DMY+KCG+I A ++F +P++ ++WT +I G AL+G +AL F
Sbjct: 421 KLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYF 480
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMAD 492
+++ + + P+ +TFL VL AC H G +E+G + + +N P+L HYSCM D
Sbjct: 481 SKMIHIGIVPDEITFLGVLSACCHGGLVEEGRK----YFSEMSSKFNVSPKLKHYSCMVD 536
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
LLGR G L+EA + V++MP+ +DA + G L AC+++ N++IGE A+ L +++P +
Sbjct: 537 LLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGN 596
Query: 553 YVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELT 612
YV +A+ Y+ W + R +M V+K PG SL ING F D H +SE
Sbjct: 597 YVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWI 656
Query: 613 YPVLDCLALHSRE 625
Y +CL +++
Sbjct: 657 Y---ECLVTLTKQ 666
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 204/442 (46%), Gaps = 47/442 (10%)
Query: 13 IYRSSTIN--QWNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSD 69
+YR +N WN+ IR V + +L+++M ++P+N T+P + K C
Sbjct: 114 LYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYS 173
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ GH++K F + C L AY +F++ VRD+ +WN+M+ G
Sbjct: 174 SCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITG 233
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ G ++++ M ++ + +T++G+ + + L+L K H + G++
Sbjct: 234 CVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFT 293
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERL----------------------------- 206
+ + N + Y KC +L A ++F + ++
Sbjct: 294 IPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPE 353
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++VV WN++++GC + ++L + M D T+V+ LS+ AL G +
Sbjct: 354 KSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWI 413
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + + +DV++ L+ MY+KCG+I A +F+ I R ++WTA+I G A G+
Sbjct: 414 HHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNA 473
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNA 385
+AL F M G +PD +T L ++S C G +E G K+F + + + +
Sbjct: 474 QDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSC 533
Query: 386 LIDMYSKCGSIGDARELFYALP 407
++D+ + G + +A EL +P
Sbjct: 534 MVDLLGRAGHLEEAEELVKNMP 555
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 305/597 (51%), Gaps = 51/597 (8%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF- 141
SPF LD A ++FD++ ++ +WN ++ +A L +F +R++ DF
Sbjct: 80 SPF---PSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIF--LRMLHQSPDFP 134
Query: 142 --VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
T L +AA + L K+ H I + + +DV + N+ I YAKC +L + VF
Sbjct: 135 DKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVF 194
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
I R VVSWNSM+ G +++L ++ M + + T+V +LS+
Sbjct: 195 VNIPRR--DVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSD 252
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
GR VHS+ +++ N ++ MY+KCG ++ A+ LFD + ++ VSWT M+ G
Sbjct: 253 FEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVG 312
Query: 320 YAQKGDLDEALRLFFAM---------------------EAAGEL-----------PDLVT 347
YA+ G+ D A +F AM + A EL PD VT
Sbjct: 313 YAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVT 372
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
++S +S C Q GA++LG W Y G+K N + +LIDMY KCG + A +F+++
Sbjct: 373 LVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVE 432
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
K V W+ MIAG A++G +A+ LF ++ E ++PN VTF +L AC+H G +E+G
Sbjct: 433 RKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRT 492
Query: 468 ISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
++ + Y P + HY+CM D+LGR G L+EA++ ++ MP+ A +WG LL A
Sbjct: 493 F----FNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGA 548
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C IH N+ + E L +LEP + YV ++N YA G+WD V+ +R +M+ +KK P
Sbjct: 549 CTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEP 608
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY---SSHLKWIPEHE 639
G S ++G F D H ++ Y LD + Y SHL + E E
Sbjct: 609 GCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEE 665
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 213/469 (45%), Gaps = 51/469 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLF-RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ IR + + H++LL+F R + Q+ P+ TFPF+ KA ++L +L + HG +
Sbjct: 103 WNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMV 162
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+K + KC L Y++F + RDV SWN+M+ F Q G E L
Sbjct: 163 IKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEAL 222
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M ++ + +T++G+ A + VHS+ + +++ N + Y
Sbjct: 223 ELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMY 282
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM----------- 235
KC ++ A+ +F + E + +VSW +M+ G ++D + + M
Sbjct: 283 TKCGSVEDAKRLFDKMPE--KDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNAL 340
Query: 236 ---------------MYNGFRL------DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+++ +L D T+VS LS+ A+ G +H + G
Sbjct: 341 ISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQG 400
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
L+ + +LI MY KCGD+ A ++F + + W+AMI+G A G +A+ LF
Sbjct: 401 MKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFS 460
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKC 393
M+ P+ VT +++ C G +E G+ +F+ G+ V ++D+ +
Sbjct: 461 KMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRA 520
Query: 394 GSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELD 441
G + +A EL +P S W ++ C ++ V A QL+EL+
Sbjct: 521 GLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELE 569
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 190/405 (46%), Gaps = 41/405 (10%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYA--KCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
LK +H+ + G+ D + I++ A L A+ VF I + +WN+++
Sbjct: 51 LKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP--NLYTWNTLIR 108
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
SL + M++ D T L+ + E L G+ H I
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
DV ++N+LI Y+KCG++ +F I R VSW +MI+ + Q G +EAL LF M
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
E P+ +T++ ++S C + E G+W +Y + +++ + NA++DMY+KCGS+
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSV 288
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEF----------------------------- 427
DA+ LF +PEK +VSWTTM+ G A GE+
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCG 348
Query: 428 --VEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
EAL+LFH+L + +P+ VT ++ L AC G ++ G I + +G+ N L
Sbjct: 349 KPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVY-IKKQGMKLNCHL 407
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G L++AL S+ + D +W ++ +H
Sbjct: 408 T--TSLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMH 449
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 14/282 (4%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
Q + +H+ + G D + LI+ S +D A+ +FD I +W +I
Sbjct: 50 QLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRA 109
Query: 320 YAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
YA + ++L +F M + + PD T +I + L GK F L
Sbjct: 110 YASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V + N+LI Y+KCG +G +F +P + VVSW +MI G EAL+LF ++
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+++PN +T + VL AC E G W S I+ + G S L + M D+ +
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGES----LTLSNAMLDMYTKC 285
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
G +++A MP K D W T+L +IGEY A
Sbjct: 286 GSVEDAKRLFDKMPEK-DIVSWTTMLVGYA-----KIGEYDA 321
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 314/608 (51%), Gaps = 24/608 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WNS I + + L LFR M++ + N+ T + + C +L+ L + +H
Sbjct: 231 VASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHA 290
Query: 79 HIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++KS + KC R+D A ++F E+ +D SWN+ML + Q G
Sbjct: 291 ALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEA 350
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ M G Q D ++ L+ A H L K VH++ I +D+D V NT +
Sbjct: 351 IEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDM 410
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC ++ + VF + R++ +SW +++ + ++L +R G ++D
Sbjct: 411 YMKCRYIEYSAHVFDRM--RIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPM 468
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+ S+L + E ++ + +H + I G LD+ V N +I +Y +CG++ + +F+ +
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETV 527
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ V+WT+MI+ YA G L+EAL LF M++ PD V ++S++ G +L GK
Sbjct: 528 EQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGK 587
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ + ++L+DMYS CGS+ A ++F A+ K +V WT MI ++G
Sbjct: 588 EVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHG 647
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS---YNP 482
+A+DLF ++++ + P+ V+FLA+L AC+H+ + +G Y D +S P
Sbjct: 648 HGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKC-----YLDMMMSTYRLEP 702
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+HY+C+ DLLGR G+ +EA +F++SMP+K + +W +LL AC++H N E+ A L
Sbjct: 703 WQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRL 762
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
+LEP + YV ++N +A G+W+ +R + ++K P S I TFT
Sbjct: 763 LELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTR 822
Query: 603 DRYHAESE 610
D H ++E
Sbjct: 823 DNSHRDAE 830
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 259/534 (48%), Gaps = 30/534 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMK---QNDIEPNNLTFPFIAKACAKLSDLIY 72
S T+ WN+ I ++ A + L ++R M+ + + P+ T + KA D
Sbjct: 123 SRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRC 182
Query: 73 SQMIHGHIVK-----SPFV---------KCDRLDCAYKIFDEMA-VRDVASWNAMLVGFA 117
+HG VK S FV KC LD A ++F+ M RDVASWN+M+ G
Sbjct: 183 GCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCL 242
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q G L LF M+ + + T +G+ Q L+L + +H+ + G + ++
Sbjct: 243 QNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ 302
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
CN + Y KC + A VF I+E + +SWNSM++ + +++ F M+
Sbjct: 303 -CNALLVMYTKCGRVDSALRVFREIDE--KDYISWNSMLSCYVQNGLYAEAIEFISEMLR 359
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
GF+ D +VSL S+ L+ G+ VH++ I D D V NTL+ MY KC I+
Sbjct: 360 GGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEY 419
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
+ +FD + + +SWT +I+ YAQ EAL +F + G D + + S++ C
Sbjct: 420 SAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSG 479
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+ L K YA GL D ++V N +ID+Y +CG + + ++F + +K +V+WT+M
Sbjct: 480 LETILLAKQLHCYAIRNGLLD-LVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSM 538
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDD 475
I A +G EAL LF ++ D++P+ V +++L A L KG + +I+ +
Sbjct: 539 INCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRN- 597
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ E S + D+ G L AL ++ K D +W ++ A +H
Sbjct: 598 ----FHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMH 646
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 188/378 (49%), Gaps = 9/378 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL---VGIQADF 141
+ KC R+ A +FD M+ R V SWNA++ + G L ++ MRL G+ D
Sbjct: 105 YGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDG 164
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T+ + +A+ VH + G+D V N I+ YAKC L A VF
Sbjct: 165 CTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFEL 224
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--A 259
+ + R V SWNSM++GC F +L+ +R M ++ T V +L VC E
Sbjct: 225 MHDG-RDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQ--VCTELAQ 281
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L GR +H+ + G ++++ N L+ MY+KCG +DSA +F I ++ +SW +M+S
Sbjct: 282 LNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSC 340
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y Q G EA+ M G PD ++S+ S G G L GK YA L +
Sbjct: 341 YVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSD 400
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V N L+DMY KC I + +F + K +SWTT+I A + +EAL++F + +
Sbjct: 401 TQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQK 460
Query: 440 LDLRPNRVTFLAVLQACT 457
++ + + ++L+AC+
Sbjct: 461 EGIKVDPMMIGSILEACS 478
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 113/214 (52%), Gaps = 6/214 (2%)
Query: 258 EALVQGRLVHSHGIHYG-FDLDVSVINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
+A+ QG VH+H + G + D + T L+ MY KCG + AR+LFDG+ RT SW A
Sbjct: 72 KAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNA 131
Query: 316 MISGYAQKGDLDEALRLFFAME---AAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
+I Y G EAL ++ AM A+G PD T+ S++ G G G A
Sbjct: 132 LIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAV 191
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEAL 431
GL + V NALI MY+KCG + A +F + + + V SW +MI+GC NG F++AL
Sbjct: 192 KHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQAL 251
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
DLF + L N T + VLQ CT L G
Sbjct: 252 DLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLG 285
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/607 (30%), Positives = 306/607 (50%), Gaps = 19/607 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + + F M+ + I PN +TF + CA + +HG +V
Sbjct: 203 WNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 262
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S + KC R D A K+F M+ D +WN M+ G+ Q G +E L
Sbjct: 263 VSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLI 322
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
FY M G+ D +T L + ++L + +H + + + D+ + + I +Y
Sbjct: 323 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYF 382
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + MA+ +F VV + +M++G + D+L +R ++ + T+
Sbjct: 383 KCRGVSMAQKIFSQCNSV--DVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITL 440
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS+L AL GR +H I GFD ++ +I MY+KCG ++ A +F +
Sbjct: 441 VSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSK 500
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW +MI+ AQ + A+ +F M +G D V++ + +S C + GK
Sbjct: 501 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAI 560
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ L +V + LIDMY+KCG++ A +F + EK +VSW ++IA +G+
Sbjct: 561 HGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKL 620
Query: 428 VEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
++L LFH+++E RP+++TFL ++ C H G +++G D GI P+ +H
Sbjct: 621 KDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGI--QPQQEH 678
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+C+ DL GR G+L EA + V+SMP DAG+WGTLL A ++H N+E+ + + L L+
Sbjct: 679 YACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLD 738
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P ++ YV ++N +A G W+ V +R++MK +V+K PG S IN T F + D H
Sbjct: 739 PWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNH 798
Query: 607 AESELTY 613
ES Y
Sbjct: 799 PESSHIY 805
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 152/532 (28%), Positives = 255/532 (47%), Gaps = 26/532 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK-------- 66
R S+I WNS I V ++ L + +M + P+ TFP + KAC
Sbjct: 95 RLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIE 154
Query: 67 -LSDLIYS------QMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
LSD + S + + ++K+ +++ ++D A K+FD + +D WN ML G+A+
Sbjct: 155 FLSDTVSSLGMDCNEFVASSLIKA-YLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G ++V++ F MR+ I + VT + + L +H + G+D + S+
Sbjct: 214 GASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIK 273
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ +S Y+KC A +F + R T V+WN M++G ++SL F+ M+ +G
Sbjct: 274 NSLLSMYSKCGRFDDAIKLF-RMMSRADT-VTWNCMISGYVQSGLMEESLIFFYEMISSG 331
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D T SLL S E L R +H + + + LD+ + + LI Y KC + A+
Sbjct: 332 VLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 391
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F V +TAMISGY G +AL +F + P+ +T++S++ G
Sbjct: 392 KIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLL 451
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL+LG+ + G + + A+IDMY+KCG + A E+F L ++ +VSW +MI
Sbjct: 452 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMIT 511
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
CA + A+D+F Q+ + + V+ A L AC + G AI I
Sbjct: 512 RCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFM-----IK 566
Query: 480 YNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ LD Y S + D+ + G LK A++ +M K+ W +++ A H
Sbjct: 567 HSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVS-WNSIIAAYGNH 617
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 213/450 (47%), Gaps = 19/450 (4%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+L R+ + WN I V ++L+ F +M + + P+ +TF + + +K
Sbjct: 291 KLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFE 350
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+L Y + IH +I++ + KC + A KIF + DV + AM+
Sbjct: 351 NLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMIS 410
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G+ G + L +F + V I + +T++ + L L + +H F I G D
Sbjct: 411 GYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDN 470
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
++ I YAKC + +A +F + + R +VSWNSM+ C D +++ +R
Sbjct: 471 RCNIGCAVIDMYAKCGRMNLAYEIFGRLSK--RDIVSWNSMITRCAQSDNPSAAIDIFRQ 528
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M +G D ++ + LS+ + G+ +H I + LDV +TLI MY+KCG+
Sbjct: 529 MGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGN 588
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMIS 353
+ +A +FD + ++ VSW ++I+ Y G L ++L LF M E +G PD +T L +IS
Sbjct: 589 LKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIIS 648
Query: 354 GCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIV 411
C G ++ G ++F + G++ ++D++ + G + +A E ++P
Sbjct: 649 LCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDA 708
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELD 441
W T++ L+ A +LM+LD
Sbjct: 709 GVWGTLLGASRLHKNVELAKVASSRLMDLD 738
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 182/373 (48%), Gaps = 8/373 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVR--DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ C K+F + R + WN+++ F +MG L L ++ M G+ D
Sbjct: 76 YAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVS 135
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T L +A + K+ ++ + +G+D + V ++ I +Y + + +A +F +
Sbjct: 136 TFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRV 195
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
++ V WN M+ G D + + M + + T +LS VC L+
Sbjct: 196 LQK--DCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLS--VCASKLLI 251
Query: 263 GRLVHSHG--IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
V HG + G D + S+ N+L+SMYSKCG D A LF + V+W MISGY
Sbjct: 252 DLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGY 311
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q G ++E+L F+ M ++G LPD +T S++ + LE + Y + ++
Sbjct: 312 VQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDI 371
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ +ALID Y KC + A+++F VV +T MI+G NG ++AL++F L+++
Sbjct: 372 FLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKV 431
Query: 441 DLRPNRVTFLAVL 453
+ PN +T +++L
Sbjct: 432 KISPNEITLVSIL 444
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 144/311 (46%), Gaps = 3/311 (0%)
Query: 156 HLSLL---KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+L+LL K VH+F I + D + YA C +F ++ RL ++ W
Sbjct: 43 NLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPW 102
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
NS+++ + +L FY M+ G DV+T L+ + V + +
Sbjct: 103 NSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSS 162
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G D + V ++LI Y + G ID A LFD + + V W M++GYA+ G D ++
Sbjct: 163 LGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKG 222
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M P+ VT ++S C ++LG GL + N+L+ MYSK
Sbjct: 223 FSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSK 282
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
CG DA +LF + V+W MI+G +G E+L F++++ + P+ +TF ++
Sbjct: 283 CGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSL 342
Query: 453 LQACTHTGFLE 463
L + + LE
Sbjct: 343 LPSVSKFENLE 353
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 16/271 (5%)
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV--SWTAMI 317
L QG+ VH+ I D ++ MY+ CG + +F + R W ++I
Sbjct: 47 LRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSII 106
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
S + + G L++AL +F M G PD+ T ++ C + ++ + S G+
Sbjct: 107 SSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMD 166
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N V ++LI Y + G I A +LF + +K V W M+ G A G + F L
Sbjct: 167 CNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGF-SL 225
Query: 438 MELD-LRPNRVTFLAVLQACTHTGFLEKGWA----ISIIQYDDKGISYNPELDHYSCMAD 492
M +D + PN VTF VL C ++ G + + D +G N L YS
Sbjct: 226 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYS---- 281
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ G+ +A+ + M ++D W ++
Sbjct: 282 ---KCGRFDDAIKLFRMMS-RADTVTWNCMI 308
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
LP +++L + C L GK + + + ++ MY+ CGS + +
Sbjct: 30 LPRRLSLL--LQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGK 87
Query: 402 LFYALPEKI--VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+FY L ++ + W ++I+ G +AL + +++ + P+ TF +++AC
Sbjct: 88 MFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV 145
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 300/592 (50%), Gaps = 25/592 (4%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHI--------------VKSPFVKCDRLDCAYKIFDEM 101
TF + K CA +DL + +H + + + + KC R A ++FD M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMR--LVGIQADFVTVMGLTQAAIHAKHLSL 159
RD +WNA++ G+A+ G + + M+ G + D VT++ + A A+ L
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ VH+F + G+D V+V + +Y KC ++ A VF + +R VSWN+M+ G
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP--VRNSVSWNAMIDGY 195
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDL 277
+++ + M+ G +DVT L + C E L + R VH + G
Sbjct: 196 ADNGNATEAMALFWRMVQEG--VDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDR-TRVSWTAMISGYAQKGDLDEALRLFFAM 336
+VSV N LI+ Y+KC D A +F+ + ++ TR+SW AMI G+ Q ++A RLF M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ PD T++S+I +W Y+ L +V V ALIDMYSKCG +
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
AR LF + ++ V++W MI G +G A++LF ++ PN TFL+VL AC
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+H G +++G D G+ P ++HY M DLLGR GKL EA F+++MPI+
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGL--EPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGI 491
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
++G +L ACK+H N+E+ E A +F+L P +V +AN YA W VA +RT M
Sbjct: 492 SVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAM 551
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
++ ++K PG S+ + + TF + H ++ Y L L ++ Y
Sbjct: 552 EKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGY 603
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + T WN+ I LF +M+ ++ P++ T + A A +SD
Sbjct: 278 FNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISD 337
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ ++ IHG+ ++ + KC R+ A ++FD R V +WNAM+ G
Sbjct: 338 PLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ GF + + LF M+ G + T + + A HA
Sbjct: 398 YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P L T +++ C L G+ + GL + AL +MY KC DAR +
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQAC 456
F +P + V+W ++AG A NG A++ ++ E RP+ VT ++VL AC
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC 129
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 295/552 (53%), Gaps = 26/552 (4%)
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
YK D+ +V SWN+++ A+ G LR F ++R +G+ + ++
Sbjct: 1972 YKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSAL 2028
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
L + H G + D+ V + I Y+KC LK A +F I LR VVSW S
Sbjct: 2029 CDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP--LRNVVSWTS 2086
Query: 215 MVAGCTYGDKFDDSLNFYRHMMY--------NGFRLDVTTVVSLLS--SFVCPEALVQGR 264
M+ G ++ D++L ++ + N LD +VS+LS S V + + +G
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG- 2145
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH + GFD + V NTL+ Y+KCG ++ +FD + ++ +SW +MI+ YAQ G
Sbjct: 2146 -VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 2204
Query: 325 DLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
EAL +F M G + VT+ +++ C +GAL GK + L+ NV V
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
++IDMY KCG + A++ F + EK V SWT M+AG ++G EALD+F++++ ++
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324
Query: 444 PNRVTFLAVLQACTHTGFLEKGW---AISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
PN +TF++VL AC+H G +E+GW +YD P ++HY CM DL GR G L
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYD-----IEPGIEHYGCMVDLFGRAGCL 2379
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
EA + ++ M +K D +WG+LL AC+IH N+++GE A LF+L+P + YV ++N Y
Sbjct: 2380 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 2439
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
A GRW V +R +MK Q+ K PG SL + G+ F D+ H E+ Y L+ L
Sbjct: 2440 ADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 2499
Query: 621 LHSREEAYSSHL 632
L ++ Y ++
Sbjct: 2500 LELQKIGYVPNM 2511
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 35/381 (9%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K+ L+ +H+ I G+ D + I Y+ + A L+F I+ +WN
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP--CTFTWNL 95
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++ T + +L Y++M+ G D T ++ + ++ G++VH I YG
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 275 FDLDVSVINTLISMYSKCG-------------------------------DIDSARVLFD 303
F DV V N LI Y KCG D+ AR +FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I + VSWTAMI+GY + +EAL LF M+A P+ T++S+I C + G L L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ +YA ++ V + ALIDMYSKCGSI DA E+F +P K + +W +MI +
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G EAL+LF ++ ++++P+ +TF+ VL AC H +++G A GI+ PE
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 484 LDHYSCMADLLGRKGKLKEAL 504
HY CM +L R L EA
Sbjct: 396 --HYECMTELYARSNNLDEAF 414
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 215/450 (47%), Gaps = 27/450 (6%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S ++ WNS I + ++ + L F +++ + P +FP K+C+ L DL+ +M
Sbjct: 1978 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 2037
Query: 77 HGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H V S + KC +L A +FDE+ +R+V SW +M+ G+ Q
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097
Query: 123 ENVLRLFYNMRLV--------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+N L LF + + D V ++ + A + + VH F + G D
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 2157
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V NT + +YAKC +++ VF +EE + +SWNSM+A ++L +
Sbjct: 2158 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEE--KDDISWNSMIAVYAQSGLSGEALEVFHG 2215
Query: 235 MMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M+ + G R + T+ ++L + AL G+ +H I + +V V ++I MY KCG
Sbjct: 2216 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 2275
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
++ A+ FD + ++ SWTAM++GY G EAL +F+ M AG P+ +T +S+++
Sbjct: 2276 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 2335
Query: 354 GCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-V 411
C +G +E G WF+ ++ + ++D++ + G + +A L + K
Sbjct: 2336 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 2395
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V W +++ C ++ +L ELD
Sbjct: 2396 VVWGSLLGACRIHKNVDLGEIAAQKLFELD 2425
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H+ I G D + LI +YS G I A +LF I + +W +I
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G ++AL L+ M G D T +I C +++LGK G +V V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 384 NALIDMYSKCG----------------------------SIGD---ARELFYALPEKIVV 412
N LID Y KCG S GD AR +F +P K VV
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SWT MI G N + EAL+LF ++ ++ PN T +++++ACT G L G I
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH--- 280
Query: 473 YDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
D I E+ Y + + D+ + G +K+A++ ++MP KS W +++ + +H
Sbjct: 281 --DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVH 336
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 119/277 (42%), Gaps = 29/277 (10%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+WN ++ G E L L+ NM GI AD T + +A + + L K VH
Sbjct: 92 TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVF--------------------CG-IEERL 206
I G DV V N I Y KC + A VF CG ++E
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 207 R--------TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
R VVSW +M+ G + +++L ++ M + T+VSL+ +
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L GR +H + I ++ V + LI MYSKCG I A +F+ + ++ +W +MI+
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
G EAL LF ME PD +T + ++ C
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCAC 368
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 56/327 (17%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR + + L+L++ M I + TFPF+ KAC + +++HG ++
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152
Query: 82 KSPF---------------------------------------------VKCDRLDCAYK 96
K F + C L A +
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
IFDE+ ++V SW AM+ G+ + E L LF M+ I + T++ L +A
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L+L + +H + I ++ V + I Y+KC +K A VF + +++ +WNSM+
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR--KSLPTWNSMI 330
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-----RLVHSHGI 271
++LN + M + D T + +L + V + + +G R+
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ---- 386
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSA 298
HYG + +Y++ ++D A
Sbjct: 387 HYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + W + I + + + L LF++M+ +I PN T + KAC ++ L +
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 76 IHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH + +K+ + KC + A ++F+ M + + +WN+M+ G
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
+ L LF M V ++ D +T +G+ A +H K++
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 706
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/622 (30%), Positives = 323/622 (51%), Gaps = 40/622 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ +R E+ +TLL+++QM + P+ T+PF+ ++C+ S++ + + IHG++V
Sbjct: 93 FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F +C + A+++FD+ +V+D+ +++ Q E + R
Sbjct: 153 KLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFR 212
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M + D T L + + L K VH I + D+ V +S Y+
Sbjct: 213 VFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYS 272
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L A +F + E+ R V WN M+A K + L ++ M +G R D+ T
Sbjct: 273 KLRSLVDARKLFDKMPEKDRVV--WNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTA 330
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ ++SS + + G+ H+H + G D VSV N+LI MY +C +DSA +F+ + D
Sbjct: 331 LPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD 390
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
++ ++ AL LF M++ G D V +++++ GALE K+
Sbjct: 391 KSSLT----------------ALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYL 434
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY--ALPEKIVVSWTTMIAGCALNG 425
Y+ GL + AL+ Y+KCGSI A+ LF + +K ++ W +MI+ A +G
Sbjct: 435 HGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG 494
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPE 483
++ + L++++ + +P++VTFL +L AC ++G +EKG + + SY P
Sbjct: 495 DWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEF----FKEMTESYGCQPS 550
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+HY+CM +LLGR G + EA + V++MPIK DA +WG LL ACK+H ++ E+ A L
Sbjct: 551 QEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLI 610
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+EP +A Y+ ++N YA G+WDGVA +R+ ++ +KK PG S ING F D
Sbjct: 611 NMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVAD 670
Query: 604 RYHAESELTYPVLDCLALHSRE 625
+ H + Y +L L L +E
Sbjct: 671 QTHPRAGDIYTILGNLELEIKE 692
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 183/437 (41%), Gaps = 46/437 (10%)
Query: 52 PNNLTFPFIAKACAKLSDLIYS--------QMIHGHIV-----KSPFVKCDRLDC----- 93
P L FP L++S Q IH + ++P + +DC
Sbjct: 14 PIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLG 73
Query: 94 ----AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
+ ++F + ++ +NA+L + G E L ++ M + D T + +
Sbjct: 74 LLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLR 133
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ ++ +++H + + +G D V Y +C + + A +F ++R
Sbjct: 134 SCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLF---DKRSVKD 190
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYR---HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ W S + T G + D+ +R M+ D T +LL ++ ++V
Sbjct: 191 LGWPSSLT--TEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIV 248
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H I D+ V ++S+YSK + AR LFD + ++ RV W MI+ YA++G
Sbjct: 249 HCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKP 308
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
E L LF +M +G DL T L +IS Q ++ GK + G V V N+L
Sbjct: 309 TECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSL 368
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY +C + A ++F +W T + + AL LF ++ ++ +
Sbjct: 369 IDMYCECKILDSACKIF---------NWMT-------DKSSLTALSLFSKMKSDGIQADF 412
Query: 447 VTFLAVLQACTHTGFLE 463
V + +L A H G LE
Sbjct: 413 VIMINILPAFVHIGALE 429
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 104/260 (40%), Gaps = 4/260 (1%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+ I +GF + ++ + LI Y+ G ++ + +F + D + A++ + G+
Sbjct: 46 IHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGE 105
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ L ++ M A PD T ++ C + G+ Y G +V A
Sbjct: 106 SERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATA 165
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L +MY +C +A +LF K + +++ N +F +++ L P+
Sbjct: 166 LAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPD 225
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
TF +L+ ++ + I K + +L + + L + L +A
Sbjct: 226 SFTFFNLLRFIAGLNSIQLAKIVHCIAIVSK---LSGDLLVNTAVLSLYSKLRSLVDARK 282
Query: 506 FVQSMPIKSDAGIWGTLLCA 525
MP K D +W ++ A
Sbjct: 283 LFDKMPEK-DRVVWNIMIAA 301
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 197/657 (29%), Positives = 317/657 (48%), Gaps = 91/657 (13%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
++T + + E V NE ++ L M+ + +P + +++Q+
Sbjct: 19 TATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTD--------------SFLHNQL 64
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV---------- 125
+H + K +L A +FD+M RD+ SWNA+L +A+ G ++N+
Sbjct: 65 LH------LYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 126 ---------------------LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
L LF M+ G + T++ + A+ L K +H
Sbjct: 119 DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIH 178
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
I +V + N YAKC +++ A +F + ++ +VSWN M++G +
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKK--NLVSWNLMISGYAKNGQ 236
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+ + M +G D T ++T
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVT-----------------------------------MST 261
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+I+ Y +CG +D AR +F ++ V WTAM+ GYA+ G ++AL LF M PD
Sbjct: 262 IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPD 321
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ S++S C + +L G+ + GL +N++V +ALIDMYSKCG I DAR +F
Sbjct: 322 SYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFN 381
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+P + VVSW MI GCA NG +AL+LF +++ +P+ VTF+ +L AC H ++E+
Sbjct: 382 LMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQ 441
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G + G++ P LDHY+CM +LLGR G++++A+ +++M D IW TLL
Sbjct: 442 GQEYFDSITNQHGMT--PTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
C +I E A LF+L+P A PY+ ++N YA GRW VA++R +MK VKKF
Sbjct: 500 ICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKF 559
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHEAG 641
G S I+ + FT+EDR H ESE Y L+ L +EE ++ + + H+ G
Sbjct: 560 AGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVL-HDVG 615
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
++ I W + + LLLF +M IEP++ T + +CAKL+ L +
Sbjct: 282 FKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG 341
Query: 74 QMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
Q +HG +V S + KC +D A +F+ M R+V SWNAM+VG AQ
Sbjct: 342 QAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQN 401
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
G ++ L LF NM + D VT +G+ A +H
Sbjct: 402 GHDKDALELFENMLQQKFKPDNVTFIGILSACLH 435
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 283/532 (53%), Gaps = 4/532 (0%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F ++ ++ WN M+ G ++ + + MR G + T + +A
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L +H+ + G D DV V + + YAKC L+ A VF I ++ VVSW +++
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDK--NVVSWTAII 185
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G KF ++++ +R ++ D T+V +LS+ L G +H + G
Sbjct: 186 SGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMV 245
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+V V +L+ MY+KCG+++ AR +FDG+ ++ VSW AMI GYA G EA+ LF M
Sbjct: 246 RNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQM 305
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ PD TV+ ++S C + GALELG+W N ++ ALID+Y+KCGS+
Sbjct: 306 QRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSM 365
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
A E+F + EK V W +I+G A+NG + LF Q+ +L ++P+ TF+ +L C
Sbjct: 366 SRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGC 425
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
TH G +++G Y + S P ++HY CM DLLGR G L EA +++MP++++A
Sbjct: 426 THAGLVDEGRRYFNSMY--RFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANA 483
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
+WG LL AC+IH + ++ E L +LEP ++ YV ++N Y+ +WD A +R M
Sbjct: 484 IVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSM 543
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+++K PG S ++G F D+YH SE Y LD L + Y
Sbjct: 544 NEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGY 595
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 213/443 (48%), Gaps = 18/443 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ I WN+ IR V+ + + + M+ PNN TFPF+ KACA+L DL
Sbjct: 73 KQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGV 132
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH +VK F KC L+ A+K+FD++ ++V SW A++ G+ +G
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVG 192
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ +F + + + D T++ + A L+ + +H + +G+ +V V
Sbjct: 193 KFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGT 252
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ + YAKC +++ A VF G+ E + +VSW +M+ G ++++ + M
Sbjct: 253 SLVDMYAKCGNMEKARSVFDGMPE--KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENV 310
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D TVV +LS+ AL G V F + + LI +Y+KCG + A
Sbjct: 311 KPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWE 370
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F G+ ++ RV W A+ISG A G + + LF +E G PD T + ++ GC +G
Sbjct: 371 VFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGL 430
Query: 361 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMI 418
++ G ++F++ L ++ ++D+ + G + +A +L +P E + W ++
Sbjct: 431 VDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
Query: 419 AGCALNGEFVEALDLFHQLMELD 441
C ++ + A QL+EL+
Sbjct: 491 GACRIHRDTQLAELALKQLIELE 513
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 10/246 (4%)
Query: 283 NTLISMYSKCG----DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
N L++M +C D + R LF I W MI G D+A+ + M +
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G LP+ T ++ C + L+LG GG +V V +L+ +Y+KCG + D
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A ++F +P+K VVSWT +I+G G+F EA+D+F +L+E++L P+ T + VL ACT
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225
Query: 459 TGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
G L G W I + G+ N + + + D+ + G +++A MP K D
Sbjct: 226 LGDLNSGEWIHKCIM--EMGMVRNVFVG--TSLVDMYAKCGNMEKARSVFDGMPEK-DIV 280
Query: 518 IWGTLL 523
WG ++
Sbjct: 281 SWGAMI 286
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 321/641 (50%), Gaps = 20/641 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+Y + + WNS I + L LF +M + + N TF +AC S
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH I+KS +V+ ++ A IF + +D+ +WN+ML G
Sbjct: 176 IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTG 235
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F Q G L FY+++ ++ D V+++ + A+ +L K +H++ I G D++
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V NT I YAKC + F + + ++SW + AG + +L R +
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHK--DLISWTTAAAGYAQNKCYLQALELLRQL 353
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G +D T + S+L + L + + +H + I G D + NT+I +Y +CG I
Sbjct: 354 QMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGII 412
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
D A +F+ I + VSWT+MIS Y G ++AL +F +M+ G PD VT++S++S
Sbjct: 413 DYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAV 472
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
L+ GK + G + N L+DMY++CGS+ DA ++F + ++ WT
Sbjct: 473 CSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWT 532
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
MI+ ++G A++LF ++ + + P+ +TFLA+L AC+H+G + +G + I +
Sbjct: 533 AMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCE 592
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
+ PE HY+C+ DLLGR+ L+EA V+SM + +W LL AC+IH N EIG
Sbjct: 593 YQLEPWPE--HYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIG 650
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E A L +L+ + YV ++N +A GRW V +R MK + + K PG S + K
Sbjct: 651 EVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNK 710
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALH-SREEAYSSHLKWI 635
F + D+ H E + Y L + RE Y + K++
Sbjct: 711 IHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFV 751
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 230/466 (49%), Gaps = 18/466 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+I WN+ + V+ EA L ++R+M+ + ++ TFP + KAC + DL IH
Sbjct: 22 SIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIH 81
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQMGFL 122
G +K + + KC+ ++ A K+FD M VR DV SWN+++ ++ G
Sbjct: 82 GLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMC 141
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L LF M G+ + T QA + + L +H+ + G DV V N
Sbjct: 142 TEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANAL 201
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
++ Y + + A ++F +E + +V+WNSM+ G + ++L F+ + +
Sbjct: 202 VAMYVRFGKMPEAAVIFGNLEG--KDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKP 259
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D +++S++ + L+ G+ +H++ I GFD ++ V NTLI MY+KC + F
Sbjct: 260 DQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAF 319
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + + +SWT +GYAQ +AL L ++ G D + S++ C L
Sbjct: 320 DLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLG 379
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
K Y GGL D V+ N +ID+Y +CG I A +F ++ K VVSWT+MI+
Sbjct: 380 KIKEIHGYTIRGGLSDPVLQ-NTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYV 438
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
NG +AL++F + E L P+ VT +++L A L+KG I
Sbjct: 439 HNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEI 484
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 220/445 (49%), Gaps = 7/445 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC + A IFD+M+ R + +WNAM+ G+ G L ++ MR +G+ D T
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
L +A + L +H I G D+ V V N+ ++ YAKC+D+ A +F +
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R VVSWNS+++ + ++L + M+ G + T + L + + G
Sbjct: 122 R-NDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H+ + G LDV V N L++MY + G + A V+F + + V+W +M++G+ Q G
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
EAL F+ ++ A PD V+++S+I G+ G L GK YA G N++V N
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
LIDMY+KC + F + K ++SWTT AG A N +++AL+L QL +
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+ ++L AC L G I Y +G +P L + + D+ G G + A+
Sbjct: 361 DATMIGSILLACRGLNCL--GKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAV 416
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
+S+ K D W +++ +C +H
Sbjct: 417 RIFESIECK-DVVSWTSMI-SCYVH 439
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 115/239 (48%), Gaps = 9/239 (3%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY KCG + A ++FD + +R+ +W AM+ GY G+ AL ++ M G D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL- 406
++ CG L G A G V V N+L+ +Y+KC I AR+LF +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
VVSW ++I+ + NG EAL LF ++++ + N TF A LQAC + F++ G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG- 179
Query: 467 AISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+Q + LD Y + + + R GK+ EA ++ K D W ++L
Sbjct: 180 ----MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK-DIVTWNSML 233
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 251/436 (57%), Gaps = 7/436 (1%)
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+D + + N ++ YAKC L A +F E + +V+W +++AG + ++ D+L
Sbjct: 119 LDNHLVLQNIIVNMYAKCGCLDDARRMFD--EMPTKDMVTWTALIAGFSQNNRPRDALLL 176
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ M+ GF+ + T+ SLL + L G +H+ + YG+ V V + L+ MY++
Sbjct: 177 FPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYAR 236
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG +D+A++ FDG+ ++ VSW A+ISG+A+KG+ + AL L + M+ P T S+
Sbjct: 237 CGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+S C GALE GKW + GLK + N L+DMY+K GSI DA+ +F L + V
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISI 470
VSW TM+ GCA +G E LD F Q++ + + PN ++FL VL AC+H+G L++G + +
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
+ K P++ HY DLLGR G L A F++ MPI+ A +WG LL AC++H
Sbjct: 417 M----KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHK 472
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
N+E+G Y A F+L+PH + P + ++N YA GRW VA +R MMK + VKK P S
Sbjct: 473 NMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWV 532
Query: 591 HINGKTCTFTAEDRYH 606
I F A D H
Sbjct: 533 EIENAVHLFVANDETH 548
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 195/413 (47%), Gaps = 18/413 (4%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV---------------KCD 89
+++ + P+ + + K C +L + +++H H+V S F+ KC
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
LD A ++FDEM +D+ +W A++ GF+Q + L LF M +G Q + T+ L +
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A+ L +H+F + G + V V + + YA+C + A+L F G+ ++
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP--TKSE 255
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWN++++G + + +L+ M F+ T S+LS+ AL QG+ VH+H
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAH 315
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I G L + NTL+ MY+K G ID A+ +FD + VSW M++G AQ G E
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L F M G P+ ++ L +++ C SG L+ G ++ ++ +V +D+
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDL 435
Query: 390 YSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ G + A +P E W ++ C ++ + + ELD
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELD 488
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 137/338 (40%), Gaps = 24/338 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N LLLF QM + +PN+ T + KA L +H +
Sbjct: 157 WTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCL 216
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + +C +D A FD M + SWNA++ G A+ G E+ L
Sbjct: 217 KYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALH 276
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L + M+ Q T + A L K VH+ I G+ + NT + YA
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYA 336
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
K + A+ VF +RL VVSWN+M+ GC ++L+ + M+ G +
Sbjct: 337 KAGSIDDAKRVF----DRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDG 304
+ + +L++ L +G Y + DV T + + + G +D A R + +
Sbjct: 393 SFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM 452
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+ T W A++ +++ + +A E A EL
Sbjct: 453 PIEPTAAVWGALLGACRMHKNMELGV---YAAERAFEL 487
>gi|357450559|ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484604|gb|AES65807.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1040
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 201/622 (32%), Positives = 322/622 (51%), Gaps = 24/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPN-NLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N+ +R E KTL L+++M Q + P+ + F + + M HGH+
Sbjct: 87 YNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHV 146
Query: 81 VKSPFVKCDRLDCAYKIFDEM-------------AVRDVASWNAMLVGFAQMGFLENVLR 127
VK + D D E+ +V + WN ++ + G +
Sbjct: 147 VK---LGMDAFDLVGNTLIELYGFLNGNGLVERKSVTKLNFWNNLIYEAYESGKIVESFE 203
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF MR +Q + VT++ L +A + + L + K +HS + + +++V +S YA
Sbjct: 204 LFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYA 263
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D LK A L+F + E+ VV WN M++ + +SL M+ +G R D+ T
Sbjct: 264 KLDSLKDARLMFEKMPEK--DVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTA 321
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ +SS +++ G+ +H+ I G D VSV N+L+ MYS C D++SAR +F I D
Sbjct: 322 IPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKD 381
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
RT VSW+AMI GYA + EAL LF M+ +G DLV V++++ + GAL +
Sbjct: 382 RTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYL 441
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--KIVVSWTTMIAGCALNG 425
Y+ L + +L++ Y+KCG I AR+LF K +V+W +MI + +G
Sbjct: 442 HGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHG 501
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
E+ + +L++Q+ ++P+ VTFL +L AC ++G ++KG I D G + P +
Sbjct: 502 EWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYG--FQPSKE 559
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH-LNIEIGEYVAYCLFK 544
H +CM DLLGR GK+ EA +++ + SDA ++G LL ACK+H L + E A L K
Sbjct: 560 HNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIK 619
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
+EP + A YV ++N +A G+WD A +R+ ++ +KK PG S ++G+ F D
Sbjct: 620 MEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADH 679
Query: 605 YHAESELTYPVLDCLALHSREE 626
H SE Y VL L L + E
Sbjct: 680 SHPRSEDIYSVLKVLELEAGME 701
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 201/403 (49%), Gaps = 19/403 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+ +N WN+ I EA + ++ LF +M+ +++PN++T + +A + + L +++
Sbjct: 180 TKLNFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVL 239
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H +V S + K D L A +F++M +DV WN M+ ++ G
Sbjct: 240 HSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCP 299
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L L Y M GI+ D T + + K + K +H+ I G D VSV N+
Sbjct: 300 KESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSL 359
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y+ C DL A +F I++ RTVVSW++M+ G D ++L+ + M +G ++
Sbjct: 360 VDMYSTCADLNSARKIFGLIKD--RTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKV 417
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D+ V+++L +F AL +H + + D S+ +L++ Y+KCG I+ AR LF
Sbjct: 418 DLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLF 477
Query: 303 DGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+ + V+W +MI+ Y+ G+ + L+ ++ + PD VT L M++ C SG
Sbjct: 478 NEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGL 537
Query: 361 LELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
++ GK F G + + ++D+ + G I +AR++
Sbjct: 538 VDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKI 580
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 172/373 (46%), Gaps = 7/373 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L ++KIF D +NA L G E L L+ M + D + ++
Sbjct: 69 LHFSHKIFSFTENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKS 128
Query: 151 AIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ H L+ H + +G+DA V NT I Y + + E + + +
Sbjct: 129 LFYVFHEKGLIMMAHGHVVKLGMDAFDLVGNTLIELYGFLNGNGLVE------RKSVTKL 182
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
WN+++ K +S + M + + T+++LL + V +L G+++HS
Sbjct: 183 NFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSL 242
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ +++V L+SMY+K + AR++F+ + ++ V W MIS Y+ G E+
Sbjct: 243 VVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKES 302
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L L + M +G PD+ T + IS + ++E GK G V V N+L+DM
Sbjct: 303 LELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDM 362
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
YS C + AR++F + ++ VVSW+ MI G A++ +EAL LF ++ + + V
Sbjct: 363 YSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIV 422
Query: 450 LAVLQACTHTGFL 462
+ +L A G L
Sbjct: 423 INILPAFAKIGAL 435
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 216/501 (43%), Gaps = 60/501 (11%)
Query: 160 LKSVHS-FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
L+ +H+ F +H G+ + S+ + I SY+ L + +F E + +N+ +
Sbjct: 37 LQQIHARFFLH-GLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENPDSII--YNAFLRN 93
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC---PEALVQGRLVHSHGIHYGF 275
+++ +L Y+ M+ D S+L S + L+ + H H + G
Sbjct: 94 LFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIM--MAHGHVVKLGM 151
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS----WTAMISGYAQKGDLDEALR 331
D V NTLI +Y G ++ +G+ +R V+ W +I + G + E+
Sbjct: 152 DAFDLVGNTLIELY---GFLNG-----NGLVERKSVTKLNFWNNLIYEAYESGKIVESFE 203
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
LF M P+ VT+++++ +S +L++GK + + L + V AL+ MY+
Sbjct: 204 LFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYA 263
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
K S+ DAR +F +PEK VV W MI+ + +G E+L+L + ++ +RP+ T +
Sbjct: 264 KLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIP 323
Query: 452 VLQACTHTGFLEKG---WAISIIQYDDKGIS-YNPELDHYSCMADL-LGRK--GKLKEAL 504
+ + T +E G A I D +S +N +D YS ADL RK G +K+
Sbjct: 324 AISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRT 383
Query: 505 DFVQSMPIKSDAGIWGTL----------LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
S IK A L L K+ L I I A+ A YV
Sbjct: 384 VVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKI-----GALHYV 438
Query: 555 EMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT-CTFTAEDRYHAESELTY 613
+ Y+L D + +++T SL + K C A ++ E
Sbjct: 439 GYLHGYSLKTNLDSLKSLKT-------------SLLNSYAKCGCIEMARKLFNEEKS--- 482
Query: 614 PVLDCLALHSREEAYSSHLKW 634
+ D +A +S AYS+H +W
Sbjct: 483 SLKDIVAWNSMITAYSNHGEW 503
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ + T+ W++ I+ + + L LF +MK + + + + I A AK+ L Y
Sbjct: 378 LIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHY 437
Query: 73 SQMIHGHIVKS--------------PFVKCDRLDCAYKIFDE--MAVRDVASWNAMLVGF 116
+HG+ +K+ + KC ++ A K+F+E +++D+ +WN+M+ +
Sbjct: 438 VGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAY 497
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ G L+ ++L ++ D VT +G+ A +++
Sbjct: 498 SNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNS 535
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 118/286 (41%), Gaps = 26/286 (9%)
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L+ P+ L Q +H+ +G + S+ + LI YS G + + +F
Sbjct: 23 TTSSILNLCTKPQYLQQ---IHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFT 79
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC----GQSGAL 361
+ + + A + G+ ++ L L+ M PD S++ + G +
Sbjct: 80 ENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLI 139
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS----WTTM 417
+ + G+ +V N LI++Y G L E+ V+ W +
Sbjct: 140 MMAH---GHVVKLGMDAFDLVGNTLIELYGFLNGNG--------LVERKSVTKLNFWNNL 188
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I +G+ VE+ +LF ++ +++PN VT + +L+A + L+ G + +
Sbjct: 189 IYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVV---A 245
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ EL + + + + LK+A + MP K D +W ++
Sbjct: 246 SNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEK-DVVVWNIMI 290
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 313/614 (50%), Gaps = 22/614 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQM---KQNDIEPNNLTFPFIAKACAKLSDLI 71
R+ + WNS + + +F+++ ++ + P+ T + ACA + ++
Sbjct: 257 RNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVR 316
Query: 72 YSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
++HG K + KC L A +FD ++V SWN ++ G++
Sbjct: 317 MGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYS 376
Query: 118 QMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
+ G V L M R ++ + VTV+ + A L LK +H + G D
Sbjct: 377 KEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDE 436
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
V N ++++YAKC L AE VFCG+E + TV SWN+++ SL+ + MM
Sbjct: 437 LVANAFVAAYAKCSSLDCAERVFCGMEGK--TVSSWNALIGAHAQNGFPGKSLDLFLVMM 494
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+G D T+ SLL + + L G+ +H + G +LD + +L+S+Y +C +
Sbjct: 495 DSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSML 554
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+++FD + +++ V W MI+G++Q EAL F M + G P + V ++ C
Sbjct: 555 LGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACS 614
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
Q AL LGK ++A L ++ V ALIDMY+KCG + ++ +F + EK W
Sbjct: 615 QVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNV 674
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
+IAG ++G ++A++LF + RP+ TFL VL AC H G + +G +
Sbjct: 675 IIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLY 734
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
G+ P+L+HY+C+ D+LGR G+L EAL V MP + D+GIW +LL +C+ + ++EIGE
Sbjct: 735 GVK--PKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGE 792
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
V+ L +LEP+ A YV ++N YA G+WD V +R MK N + K G S I G
Sbjct: 793 EVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMV 852
Query: 597 CTFTAEDRYHAESE 610
F D +ES+
Sbjct: 853 YRFLVSDGSLSESK 866
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 243/526 (46%), Gaps = 34/526 (6%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH----- 77
N+ R+A++ L + D+ P+N T P +AKACA ++D+ + +H
Sbjct: 172 NALFRDAIS--------LFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALK 223
Query: 78 ---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
G+ + + + KC ++ A K+F+ M R++ SWN+++ ++ G +
Sbjct: 224 AGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGV 283
Query: 129 FYNMRLV---GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
F + + G+ D T++ + A + + VH +G+ +V+V N+ +
Sbjct: 284 FKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDM 343
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRLDV 244
Y+KC L A +F + VVSWN+++ G + F + M R++
Sbjct: 344 YSKCGYLGEARALF--DMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNE 401
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TV+++L + L+ + +H + +GF D V N ++ Y+KC +D A +F G
Sbjct: 402 VTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCG 461
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +T SW A+I +AQ G ++L LF M +G PD T+ S++ C + L G
Sbjct: 462 MEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCG 521
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K + GL+ + + +L+ +Y +C S+ + +F + K +V W MI G + N
Sbjct: 522 KEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQN 581
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
EALD F Q++ ++P + VL AC+ L G + ++ E
Sbjct: 582 ELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALK----AHLSED 637
Query: 485 DHYSC-MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+C + D+ + G ++++ + + K +A +W ++ IH
Sbjct: 638 AFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEA-VWNVIIAGYGIH 682
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 186/377 (49%), Gaps = 7/377 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAK 155
+FD +D+ +NA+L G+++ + + LF + + D T+ + +A
Sbjct: 150 VFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVA 209
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ L ++VH+ + G +D V N I+ Y KC ++ A VF + R R +VSWNS+
Sbjct: 210 DVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETM--RNRNLVSWNSV 267
Query: 216 VAGCTYGDKFDDSLNFYRHMMYN---GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
+ C+ F + ++ ++ + G DV T+V+++ + + G +VH
Sbjct: 268 MYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFK 327
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G +V+V N+L+ MYSKCG + AR LFD + VSW +I GY+++GD L
Sbjct: 328 LGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFEL 387
Query: 333 FFAMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
M+ ++ + VTVL+++ C L K YA G + +V NA + Y+
Sbjct: 388 LQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYA 447
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KC S+ A +F + K V SW +I A NG ++LDLF +M+ + P+R T +
Sbjct: 448 KCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGS 507
Query: 452 VLQACTHTGFLEKGWAI 468
+L AC FL G I
Sbjct: 508 LLLACARLKFLRCGKEI 524
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 160/317 (50%), Gaps = 8/317 (2%)
Query: 147 LTQAAIHAKHLSLLKSVHSF-GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
L +A H K++ + + VH+ + DV + I+ Y+ C + VF +E+
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ +N++++G + F D+++ + ++ D T+ + + + G
Sbjct: 158 --DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGE 215
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH+ + G D V N LI+MY KCG ++SA +F+ + +R VSW +++ ++ G
Sbjct: 216 AVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENG 275
Query: 325 DLDEALRLFFAM---EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
E +F + E G +PD+ T++++I C G + +G A G+ + V
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVT 335
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-EL 440
V N+L+DMYSKCG +G+AR LF K VVSW T+I G + G+F +L ++ E
Sbjct: 336 VNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREE 395
Query: 441 DLRPNRVTFLAVLQACT 457
+R N VT L VL AC+
Sbjct: 396 KVRVNEVTVLNVLPACS 412
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 8/246 (3%)
Query: 263 GRLVHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
GR VH+ + DV + +I+MYS CG +R +FD ++ + A++SGY+
Sbjct: 111 GRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYS 170
Query: 322 QKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+ +A+ LF + +A +L PD T+ + C +ELG+ A G +
Sbjct: 171 RNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDA 230
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-- 438
V NALI MY KCG + A ++F + + +VSW +++ C+ NG F E +F +L+
Sbjct: 231 FVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLIS 290
Query: 439 -ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
E L P+ T + V+ AC G + G + + + + E+ + + D+ +
Sbjct: 291 EEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFK---LGITEEVTVNNSLVDMYSKC 347
Query: 498 GKLKEA 503
G L EA
Sbjct: 348 GYLGEA 353
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 295/552 (53%), Gaps = 26/552 (4%)
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
YK D+ +V SWN+++ A+ G LR F ++R +G+ + ++
Sbjct: 1099 YKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSAL 1155
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
L + H G + D+ V + I Y+KC LK A +F I LR VVSW S
Sbjct: 1156 CDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP--LRNVVSWTS 1213
Query: 215 MVAGCTYGDKFDDSLNFYRHMMY--------NGFRLDVTTVVSLLS--SFVCPEALVQGR 264
M+ G ++ D++L ++ + N LD +VS+LS S V + + +G
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG- 1272
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH + GFD + V NTL+ Y+KCG ++ +FD + ++ +SW +MI+ YAQ G
Sbjct: 1273 -VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331
Query: 325 DLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
EAL +F M G + VT+ +++ C +GAL GK + L+ NV V
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
++IDMY KCG + A++ F + EK V SWT M+AG ++G EALD+F++++ ++
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451
Query: 444 PNRVTFLAVLQACTHTGFLEKGW---AISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
PN +TF++VL AC+H G +E+GW +YD P ++HY CM DL GR G L
Sbjct: 1452 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYD-----IEPGIEHYGCMVDLFGRAGCL 1506
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
EA + ++ M +K D +WG+LL AC+IH N+++GE A LF+L+P + YV ++N Y
Sbjct: 1507 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 1566
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
A GRW V +R +MK Q+ K PG SL + G+ F D+ H E+ Y L+ L
Sbjct: 1567 ADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 1626
Query: 621 LHSREEAYSSHL 632
L ++ Y ++
Sbjct: 1627 LELQKIGYVPNM 1638
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 35/381 (9%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K+ L+ +H+ I G+ D + I Y+ + A L+F I+ +WN
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP--CTFTWNL 95
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++ T + +L Y++M+ G D T ++ + ++ G++VH I YG
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 275 FDLDVSVINTLISMYSKCG-------------------------------DIDSARVLFD 303
F DV V N LI Y KCG D+ AR +FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I + VSWTAMI+GY + +EAL LF M+A P+ T++S+I C + G L L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ +YA ++ V + ALIDMYSKCGSI DA E+F +P K + +W +MI +
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G EAL+LF ++ ++++P+ +TF+ VL AC H +++G A GI+ PE
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 484 LDHYSCMADLLGRKGKLKEAL 504
HY CM +L R L EA
Sbjct: 396 --HYECMTELYARSNNLDEAF 414
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 215/450 (47%), Gaps = 27/450 (6%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S ++ WNS I + ++ + L F +++ + P +FP K+C+ L DL+ +M
Sbjct: 1105 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 1164
Query: 77 HGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H V S + KC +L A +FDE+ +R+V SW +M+ G+ Q
Sbjct: 1165 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 123 ENVLRLFYNMRLV--------GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+N L LF + + D V ++ + A + + VH F + G D
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 1284
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V NT + +YAKC +++ VF +EE + +SWNSM+A ++L +
Sbjct: 1285 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEE--KDDISWNSMIAVYAQSGLSGEALEVFHG 1342
Query: 235 MMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M+ + G R + T+ ++L + AL G+ +H I + +V V ++I MY KCG
Sbjct: 1343 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 1402
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
++ A+ FD + ++ SWTAM++GY G EAL +F+ M AG P+ +T +S+++
Sbjct: 1403 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 1462
Query: 354 GCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-V 411
C +G +E G WF+ ++ + ++D++ + G + +A L + K
Sbjct: 1463 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 1522
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V W +++ C ++ +L ELD
Sbjct: 1523 VVWGSLLGACRIHKNVDLGEIAAQKLFELD 1552
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H+ I G D + LI +YS G I A +LF I + +W +I
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G ++AL L+ M G D T +I C +++LGK G +V V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 384 NALIDMYSKCG----------------------------SIGD---ARELFYALPEKIVV 412
N LID Y KCG S GD AR +F +P K VV
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SWT MI G N + EAL+LF ++ ++ PN T +++++ACT G L G I
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI---- 279
Query: 473 YDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
D I E+ Y + + D+ + G +K+A++ ++MP KS W +++ + +H
Sbjct: 280 -HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVH 336
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 126/295 (42%), Gaps = 29/295 (9%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
R+ A +F ++ +WN ++ G E L L+ NM GI AD T + +
Sbjct: 74 RIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF---------- 199
A + + L K VH I G DV V N I Y KC + A VF
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS 193
Query: 200 ----------CG-IEERLR--------TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
CG ++E R VVSW +M+ G + +++L ++ M
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ T+VSL+ + L GR +H + I ++ V + LI MYSKCG I A
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+F+ + ++ +W +MI+ G EAL LF ME PD +T + ++ C
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCAC 368
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 56/327 (17%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR + + L+L++ M I + TFPF+ KAC + +++HG ++
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152
Query: 82 K---------------------------------------------SPFVKCDRLDCAYK 96
K S + C L A +
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
IFDE+ ++V SW AM+ G+ + E L LF M+ I + T++ L +A
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L+L + +H + I ++ V + I Y+KC +K A VF + +++ +WNSM+
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR--KSLPTWNSMI 330
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-----RLVHSHGI 271
++LN + M + D T + +L + V + + +G R+
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ---- 386
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSA 298
HYG + +Y++ ++D A
Sbjct: 387 HYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + W + I + + + L LF++M+ +I PN T + KAC ++ L +
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 76 IHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH + +K+ + KC + A ++F+ M + + +WN+M+ G
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
+ L LF M V ++ D +T +G+ A +H K++
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 202/661 (30%), Positives = 307/661 (46%), Gaps = 88/661 (13%)
Query: 15 RSSTINQWNSQIREAVN-KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
R+ WN+ +R + +N H+ LL ++ + +P++ T+P + + CA
Sbjct: 65 RNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEG 124
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H H V S F C + A ++F+E V D+ SWN +L G+ Q
Sbjct: 125 RQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQA 184
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G +E R+F M + +
Sbjct: 185 GEVEEAERVFEGMP---------------------------------------ERNTIAS 205
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ I+ + + ++ A +F G+ R R +VSW++MV+ + +++L + M +G
Sbjct: 206 NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSG 265
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+D VVS LS+ + GR VH + G + VS+ N LI +YS CG+I AR
Sbjct: 266 VAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDAR 325
Query: 300 VLFD--------------------------------GICDRTRVSWTAMISGYAQKGDLD 327
+FD + ++ VSW+AMISGYAQ
Sbjct: 326 RIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFS 385
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EAL LF M+ G PD ++S IS C L+LGKW Y L+ NV++ LI
Sbjct: 386 EALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLI 445
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
DMY KCG + +A E+FYA+ EK V +W +I G A+NG ++L++F + + PN +
Sbjct: 446 DMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEI 505
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
TF+ VL AC H G + G + I N + HY CM DLLGR G LKEA + +
Sbjct: 506 TFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEAN--IKHYGCMVDLLGRAGLLKEAEELI 563
Query: 508 QSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWD 567
SMP+ D WG LL AC+ H + E+GE + L +L+P +V ++N YA G W
Sbjct: 564 DSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWG 623
Query: 568 GVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEA 627
V IR +M ++ V K PG S+ NG F A D+ H + +LD +A + E
Sbjct: 624 NVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEG 683
Query: 628 Y 628
Y
Sbjct: 684 Y 684
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 289/547 (52%), Gaps = 9/547 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ C + A IFD + +++ WN M+ G+A G L L+ M G +AD T
Sbjct: 105 YAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTY 164
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A + + + VHS + G+++D+ V N+ ++ YAK D+ A +VF + E
Sbjct: 165 PFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE 224
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNF--YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R + SWN+M++G Y D F + M G D TT++ LLS+ +A+ +
Sbjct: 225 R--DLTSWNTMISG--YAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKE 280
Query: 263 GRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G+++H + + + + N+LI MY C + AR LF+ + + VSW +MI GYA
Sbjct: 281 GKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYA 340
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ GD E+LRLF M G PD VT ++++ C Q AL G +Y G N +
Sbjct: 341 RNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTI 400
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V AL+DMYSKCGS+ +R +F +P+K +VSW+ M+AG L+G EA+ + +
Sbjct: 401 VGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANS 460
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+ P+ F ++L AC+H G + +G I +K + P L HYSCM DLLGR G L
Sbjct: 461 VIPDNGVFTSILSACSHAGLVVEG--KEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLD 518
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
EA +++M IK + IW LL A ++H NI++ E A +F + P + Y+ ++N YA
Sbjct: 519 EAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYA 578
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
RWD V +R M++R +KK PG S ++ F D+ H ++E Y L+ L
Sbjct: 579 AEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQ 638
Query: 622 HSREEAY 628
+E Y
Sbjct: 639 QLKEAGY 645
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 178/362 (49%), Gaps = 23/362 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR + K+L+L+R+M +N T+PF+ KAC L + + +H +V
Sbjct: 129 WNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVV 188
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K + A +FD MA RD+ SWN M+ G+A+
Sbjct: 189 VCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFL 248
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISSY 186
+F M G+ AD T++GL A K + K +H + + + + + N+ I Y
Sbjct: 249 VFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMY 308
Query: 187 AKCDDLKMAELVFCGIEERLR--TVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLD 243
C+ + A +F ER+R VSWNSM+ G GD F +SL +R M +G D
Sbjct: 309 CNCNCMVDARRLF----ERVRWKDTVSWNSMILGYARNGDAF-ESLRLFRRMALDGSGPD 363
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T +++L + AL G +HS+ + GFD + V L+ MYSKCG + +R +FD
Sbjct: 364 QVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFD 423
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ D++ VSW+AM++GY G EA+ + M+A +PD S++S C +G +
Sbjct: 424 EMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVE 483
Query: 364 GK 365
GK
Sbjct: 484 GK 485
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 5/261 (1%)
Query: 212 WNSMVAGCTYGD---KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
+NS + + GD + SL+ H + + L +LL SF ++ QG+ +H+
Sbjct: 25 YNSFTSHFSQGDVAQMVERSLSMREHPLQQ-YPLTSLQCGALLQSFTNTKSFKQGQQLHA 83
Query: 269 HGIHYGFDLDVSVINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
H I + + + +NT L + Y+ CG + A V+FDGI + W MI GYA G
Sbjct: 84 HMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPM 143
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
++L L+ M G+ D T ++ CG +E+G+ + GL+ ++ V N+L+
Sbjct: 144 KSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLL 203
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
MY+K G +G AR +F + E+ + SW TMI+G A N + A +F + + L +
Sbjct: 204 AMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCT 263
Query: 448 TFLAVLQACTHTGFLEKGWAI 468
T L +L AC +++G I
Sbjct: 264 TLLGLLSACADLKAVKEGKVI 284
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 19/318 (5%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WN+ I ++ L+F M + + + T + ACA L + ++IHG
Sbjct: 227 LTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHG 286
Query: 79 HIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ V++ + C+ + A ++F+ + +D SWN+M++G+A+ G
Sbjct: 287 YAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAF 346
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LRLF M L G D VT + + A L S+HS+ + G DA+ V +
Sbjct: 347 ESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALV 406
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC L + VF + + +++VSW++MVAG + ++++ M N D
Sbjct: 407 DMYSKCGSLACSRRVFDEMPD--KSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPD 464
Query: 244 VTTVVSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
S+LS+ +V+G+ + + Y +S + ++ + + G +D A V+
Sbjct: 465 NGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVII 524
Query: 303 DGI-CDRTRVSWTAMISG 319
+ T W A+++
Sbjct: 525 RTMEIKPTSDIWAALLTA 542
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 199/683 (29%), Positives = 325/683 (47%), Gaps = 74/683 (10%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L R R + W + I K + LL F++M++N + P+N P + KAC L
Sbjct: 69 LFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEW 128
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
+ +++HG + K K M R+ +WN+M+VG+ Q G E + +F
Sbjct: 129 IRIGKVVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVF 188
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
Y MR G++ VT+ A+ + L K H+ + G++ ++ ++ I+ Y+K
Sbjct: 189 YEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKV 248
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
++ AE VF + E + VV+WN +++G + D +LN M R D T+ +
Sbjct: 249 GLIEDAESVFSRMLE--KDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLAT 306
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
L+S+F L G+ H + I + DV V+++++ MY+KC I AR +F+ +
Sbjct: 307 LMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKD 366
Query: 310 RVSWTAMISGYAQKGDLDEALRLFF----------------------------------- 334
+ W M++ +A+ G EAL LF+
Sbjct: 367 LILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFL 426
Query: 335 AMEAAGELPDLVTVLSMISGCGQSG----------------------------------- 359
M++ G P+LVT ++ISG +SG
Sbjct: 427 QMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLA 486
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+L++G+ Y L ++ + +L+DMY+KCG A+ +F +P+K + + MI+
Sbjct: 487 SLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMIS 546
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G AL+G+ VEAL L+ L E L+P+ +TF L AC+H + +G + + + I
Sbjct: 547 GFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNI- 605
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
NP ++HY CM LL R G L EA + +MP K D I G+LL AC+ H IE+ EY++
Sbjct: 606 -NPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLS 664
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L KL+P ++ YV M+N YA GRWD V +R +MK ++K PG S + + F
Sbjct: 665 NQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVF 724
Query: 600 TAEDRYHAESELTYPVLDCLALH 622
A D+ H E+E Y L L +
Sbjct: 725 VAGDKSHPETEEIYTTLALLLME 747
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 142/572 (24%), Positives = 255/572 (44%), Gaps = 42/572 (7%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP----------------FVKCDRLDCAYKIFDEMAVRD 105
+ C L + IH IVK + KCD + + +F + +++
Sbjct: 18 QGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRLKN 77
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V SW A++ + GF + L F M+ G+ D + + +A + + + K VH
Sbjct: 78 VFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVH- 136
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
G+ + V W K M + R V+WNSM+ G
Sbjct: 137 -----GLVSCGYVWKMWGGGGCKKGVCGMPQ----------RNAVAWNSMIVGYVQNGLN 181
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
++++ + M G T+ S LS+ AL G+ H+ + G ++ ++ ++L
Sbjct: 182 EEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSL 241
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
I+ YSK G I+ A +F + ++ V+W +ISGY Q G++D+AL + M D
Sbjct: 242 INFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDS 301
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
VT+ +++S L+LGK Y L+ +V+V ++++DMY+KC IG AR +F +
Sbjct: 302 VTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNS 361
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
K ++ W TM+A A G EAL+LF+Q+ + PN +++ +++ ++G + +
Sbjct: 362 SITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEA 421
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP---IKSD-AGIWGT 521
+ +Q G+ P L ++ + L R G EA+ Q M +K + I G
Sbjct: 422 KDM-FLQMQSLGVQ--PNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGV 478
Query: 522 LLCACKIHLNIEIGEYVAYCLFKLEPHSAAPY-VEMANKYALGGRWDGVANIRTMMKRNQ 580
LL AC +++IG + L + + + P + + YA G D + M+ +
Sbjct: 479 LL-ACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKE 537
Query: 581 VKKFPGQ-SLFHINGKTCTFTAEDRYHAESEL 611
+ + S F ++G+ A R E L
Sbjct: 538 LPIYNAMISGFALHGQAVEALALYRCLKEEGL 569
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 138/307 (44%), Gaps = 31/307 (10%)
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG--FDLDVSVINTLISMYSKC 292
M R+ LL V AL GR +H+ + G F ++ + L+ Y+KC
Sbjct: 1 MELKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC 60
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
+ +++ LF + + SW A+I +KG EAL F M+ G LPD + +++
Sbjct: 61 DNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVL 120
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
CG + +GK + ++ C + M+ ++ +P++ V
Sbjct: 121 KACGGLEWIRIGK----------VVHGLVSCGYVWKMWGGG----GCKKGVCGMPQRNAV 166
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE---KGWAIS 469
+W +MI G NG EA+++F+++ E + P +VT + L A + G L+ +G AI+
Sbjct: 167 AWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIA 226
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+I GI L S + + + G +++A + V S ++ D W L+
Sbjct: 227 VI----CGIEMTTNLG--SSLINFYSKVGLIEDA-ESVFSRMLEKDVVTWNLLISGY--- 276
Query: 530 LNIEIGE 536
++IGE
Sbjct: 277 --VQIGE 281
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 301/568 (52%), Gaps = 37/568 (6%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD + + WN M+ G++++ +N + ++ M I+ D T L +
Sbjct: 60 ARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTR 119
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
L K + + + G D+++ V +I ++ C + +A VF + VV+WN
Sbjct: 120 NMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAW--EVVTWN 177
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
M++G +F S + M G + T+V +LS+ + L G+ ++ + I+
Sbjct: 178 IMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY-ING 236
Query: 274 GF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD----- 327
G + ++ + N LI M++ CG++D A+ +FD + +R +SWT++++G+A G +D
Sbjct: 237 GIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKY 296
Query: 328 --------------------------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
EAL LF M+ + PD T++S+++ C GAL
Sbjct: 297 FDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGAL 356
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
ELG+W Y +K++ V NALIDMY KCG++G A+++F + K +WT MI G
Sbjct: 357 ELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGL 416
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A+NG EAL +F ++E + P+ +T++ VL ACTH G +EKG + I GI
Sbjct: 417 AINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIK-- 474
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P + HY CM DLLGR G+L+EA + + +MP+K ++ +WG+LL AC++H N+++ E A
Sbjct: 475 PNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQ 534
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ +LEP + A YV + N YA RW+ + +R +M +KK PG SL +NG F A
Sbjct: 535 ILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVA 594
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYS 629
D+ H +S+ Y L+ + + YS
Sbjct: 595 GDQSHPQSKEIYAKLENMMQDLIKAGYS 622
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 212/469 (45%), Gaps = 45/469 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN+ I+ N + ++ M ++I+P+ TFPF+ K + L Y +++
Sbjct: 71 TLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLL 130
Query: 78 GHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
H VK F C +D A K+FD +V +WN ML G+ ++ +
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFK 190
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LF M G+ + VT++ + A K L K ++ + V+ ++ + N I
Sbjct: 191 KSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLI 250
Query: 184 SSYAKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNS 214
+A C ++ A+ VF ++ R R VSW +
Sbjct: 251 DMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTA 310
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M+ G ++F ++L +R M + + D T+VS+L++ AL G V ++
Sbjct: 311 MIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNS 370
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
D V N LI MY KCG++ A+ +F + + + +WTAMI G A G +EAL +F
Sbjct: 371 IKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFS 430
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKC 393
M A PD +T + ++ C +G +E G+ +F + G+K NV ++D+ +
Sbjct: 431 NMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRA 490
Query: 394 GSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
G + +A E+ +P K + W +++ C ++ A Q++EL+
Sbjct: 491 GRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELE 539
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 168/351 (47%), Gaps = 36/351 (10%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM--AELVFCGIEERLRTVVSW 212
K + LK +HS I +G+ +D I+ + KM A VF I + T+ W
Sbjct: 18 KSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQP--TLFIW 75
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N+M+ G + + + ++ Y M+ + + D T LL F AL G+++ +H +
Sbjct: 76 NTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVK 135
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
+GFD ++ V I M+S C +D AR +FD V+W M+SGY + ++ L
Sbjct: 136 HGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKML 195
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F ME G P+ VT++ M+S C + LE GK Y G ++ N+++ N LIDM++
Sbjct: 196 FIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAA 255
Query: 393 CGSIGD-------------------------------ARELFYALPEKIVVSWTTMIAGC 421
CG + + AR+ F +PE+ VSWT MI G
Sbjct: 256 CGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGY 315
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISII 471
F+EAL LF ++ +++P+ T +++L AC H G LE G W + I
Sbjct: 316 LRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYI 366
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARVLFDGICDRTRVSWTA 315
+++ Q + +HSH I G D +I+ + G + AR +FD I T W
Sbjct: 18 KSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNT 77
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
MI GY++ + ++ M A+ PD T ++ G ++ AL+ GK N+A G
Sbjct: 78 MIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHG 137
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
N+ V A I M+S C + AR++F VV+W M++G +F ++ LF
Sbjct: 138 FDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFI 197
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
++ + + PN VT + +L AC+ LE G I +Y + GI L + + D+
Sbjct: 198 EMEKRGVSPNSVTLVLMLSACSKLKDLEGG--KHIYKYINGGI-VERNLILENVLIDMFA 254
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G++ EA +M D W +++
Sbjct: 255 ACGEMDEAQSVFDNMK-NRDVISWTSIV 281
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/589 (33%), Positives = 298/589 (50%), Gaps = 31/589 (5%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWN 110
EPN ++ I KA AK S + HI A ++FDE D S+N
Sbjct: 71 EPNVFSYNVIVKAYAKDSKI--------HI-------------ARQLFDENPQPDTVSYN 109
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ G+A + LF MR +G + D T+ GL A + L+K +H F +
Sbjct: 110 TLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFAVSG 167
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G D+ SV N +++ Y+K L+ A VF G++ LR VSWNSM+ + +L
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDG-LRDEVSWNSMIVAYGQHKEGAKALA 226
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
Y+ M++ GF++D+ T+ S+L++ + L+ GR H I GF + V + LI YS
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYS 286
Query: 291 KCGDIDS---ARVLFDGICDRTRVSWTAMISGYAQKGD-LDEALRLFFAMEAAGELPDLV 346
KCG D + +F I V W MISGY+ + +EA++ F M+ G PD
Sbjct: 287 KCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDC 346
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYA 405
+ + + S C + GK A + N + V NALI +Y K G++ DAR +F
Sbjct: 347 SFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDR 406
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+PE VS+ MI G A +G EAL L+ ++++ + PN +TF+A+L AC H G +++G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG 466
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ PE +HYSCM DLLGR GKL+EA F+ +MP K + W LL A
Sbjct: 467 Q--KYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C+ H N+ + E A L ++P +A PYV +AN YA G+W+ +A++R M+ +++K P
Sbjct: 525 CRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKP 584
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
G S + K F AED H L+ + ++ Y KW
Sbjct: 585 GCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKW 633
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 197/423 (46%), Gaps = 28/423 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I + E ++LF++M++ E + T + AC DLI + +H V
Sbjct: 108 YNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAV 165
Query: 82 KSPFVKCDRLDCAY--------------KIFDEM-AVRDVASWNAMLVGFAQMGFLENVL 126
F ++ A+ +F M +RD SWN+M+V + Q L
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L+ M G + D T+ + A HL + H I G + V + I Y
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFY 285
Query: 187 AKC---DDLKMAELVFCGIEERLRT-VVSWNSMVAGCTYGDKF-DDSLNFYRHMMYNGFR 241
+KC D + +E VF +E L +V WN+M++G + ++ ++++ +R M G R
Sbjct: 286 SKCGGRDGMSDSEKVF---QEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHR 342
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARV 300
D + V + S+ + QG+ +H I + +SV N LIS+Y K G++ AR
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARR 402
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+FD + + VS+ MI GYAQ G EALRL+ M +G P+ +T ++++S C G
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGK 462
Query: 361 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMI 418
++ G K+F+ + ++ + +ID+ + G + +A A+P K V+W ++
Sbjct: 463 VDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Query: 419 AGC 421
C
Sbjct: 523 GAC 525
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 36/365 (9%)
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
Q F + L ++ + L KS+H+ + V + + N +++ Y+KC L A
Sbjct: 5 QWKFKSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARA 64
Query: 198 VFCGIEE-----------------------------RLRTVVSWNSMVAGCTYGDKFDDS 228
F EE VS+N++++G + +
Sbjct: 65 AFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAA 124
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
+ ++ M GF +D T+ L+++ C + + + +H + GFD SV N ++
Sbjct: 125 MVLFKRMRELGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTY 182
Query: 289 YSKCGDIDSARVLFDGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
YSK G + A +F G+ R VSW +MI Y Q + +AL L+ M G D+ T
Sbjct: 183 YSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG---SIGDARELFY 404
+ S+++ L G+ F G N V + LID YSKCG + D+ ++F
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQ 302
Query: 405 ALPEKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ +V W TMI+G ++N E EA+ F Q+ + RP+ +F+ V AC++
Sbjct: 303 EILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 464 KGWAI 468
+G I
Sbjct: 363 QGKQI 367
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 280/561 (49%), Gaps = 36/561 (6%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
LD A +F + N +L F++ EN L L+ ++R G D + L +A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 151 AIHAKHLSLLKSVHSFGIHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
L+L +H G AD + + I+ YA C + A +F + R V
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHR--DV 182
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V+WN M+ G + +D L Y M +G D + ++LS+ L G+ +H
Sbjct: 183 VTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQF 242
Query: 270 GIHYGFDLDVSVINTLISMYSKCGD-------------------------------IDSA 298
GF + + +L++MY+ CG + A
Sbjct: 243 IKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDA 302
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R +FD + ++ V W+AMISGYA+ EAL+LF M+ +PD +T+LS+IS C
Sbjct: 303 RFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANV 362
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GAL KW YA G + + NALIDMY+KCG++ ARE+F +P K V+SW++MI
Sbjct: 363 GALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMI 422
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
A++G+ A+ LFH++ E ++ PN VTF+ VL AC+H G +E+G ++ I
Sbjct: 423 NAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRI 482
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
S P+ +HY CM DL R L++A++ +++MP + IWG+L+ AC+ H IE+GE+
Sbjct: 483 S--PQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFA 540
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +LEP V ++N YA RWD V +R +MK V K S +N +
Sbjct: 541 ATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHV 600
Query: 599 FTAEDRYHAESELTYPVLDCL 619
F DRYH +S+ Y LD +
Sbjct: 601 FMMADRYHKQSDEIYKKLDAV 621
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 225/479 (46%), Gaps = 52/479 (10%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N +R+ TL L+ +++N + +FP + KA +KLS L IHG K
Sbjct: 84 NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASK 143
Query: 83 ------SPFVK---------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
PF++ C R+ A +FD+M+ RDV +WN M+ G++Q ++VL+
Sbjct: 144 FGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----GIHIGVDADVSVCNTW- 182
L+ M+ G + D + + + A HA +LS K++H F G +G S+ N +
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263
Query: 183 --------------------------ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+S YAK ++ A +F + E + +V W++M+
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVE--KDLVCWSAMI 321
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G + ++L + M D T++S++S+ ALVQ + +H++ GF
Sbjct: 322 SGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFG 381
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ + N LI MY+KCG++ AR +F+ + + +SW++MI+ +A GD D A+ LF M
Sbjct: 382 RTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRM 441
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
+ P+ VT + ++ C +G +E G K+F + + ++D+Y +
Sbjct: 442 KEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANH 501
Query: 396 IGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ A EL +P V+ W ++++ C +GE L F L+L P+ L VL
Sbjct: 502 LRKAMELIETMPFPPNVIIWGSLMSACQNHGEI--ELGEFAATRLLELEPDHDGALVVL 558
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 147/396 (37%), Gaps = 92/396 (23%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WN I L L+ +MK + EP+ + + ACA +L Y + IH
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244
Query: 78 ------------------------------------GHIVKSP-----FVKCDRLDCAYK 96
H+V S + K + A
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
IFD M +D+ W+AM+ G+A+ L+LF M+ I D +T++ + A +
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +H++ G + + N I YAKC +L A VF + + V+SW+SM+
Sbjct: 365 LVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPR--KNVISWSSMI 422
Query: 217 -AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
A +GD D ++ + M + T + +L + C
Sbjct: 423 NAFAMHGDA-DSAIALFHRMKEQNIEPNGVTFIGVL--YAC------------------- 460
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-----WTAMISGYAQKGDLDEAL 330
S G ++ + F + + R+S + M+ Y + L +A+
Sbjct: 461 --------------SHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAM 506
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
L M P+++ S++S C G +ELG++
Sbjct: 507 ELIETMPFP---PNVIIWGSLMSACQNHGEIELGEF 539
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 27/150 (18%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA-- 65
PR N I W+S I +A + LF +MK+ +IEPN +TF + AC+
Sbjct: 411 PRKNVI-------SWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHA 463
Query: 66 ---KLSDLIYSQMIHGHIVKSP-----------FVKCDRLDCAYKIFDEMAV-RDVASWN 110
+ +S MI+ H + SP + + + L A ++ + M +V W
Sbjct: 464 GLVEEGQKFFSSMINEHRI-SPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWG 522
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+++ G +E L F RL+ ++ D
Sbjct: 523 SLMSACQNHGEIE--LGEFAATRLLELEPD 550
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 191/602 (31%), Positives = 307/602 (50%), Gaps = 22/602 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + + L L+ +M ++P+ TFP + + C + +L+ + IH H++
Sbjct: 175 WNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVI 234
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F VKC ++ A +FD+M RD SWNAM+ G+ + G LR
Sbjct: 235 RYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLR 294
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + D +T+ + A L + +H + + D S+ N+ I Y+
Sbjct: 295 LFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYS 354
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
++ AE VF E R +VSW +M++G +L Y+ M G D T+
Sbjct: 355 SVGLIEEAETVFSRTE--CRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITI 412
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+LS+ C L G +H G V N+LI MY+KC ID A +F +
Sbjct: 413 AIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLE 472
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKW 366
+ VSWT++I G EAL FF E L P+ VT++ ++S C + GAL GK
Sbjct: 473 KNIVSWTSIILGLRINNRCFEAL--FFFREMIRRLKPNSVTLVCVLSACARIGALTCGKE 530
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+A G+ + + NA++DMY +CG + A + F+++ + V SW ++ G A G+
Sbjct: 531 IHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDHE-VTSWNILLTGYAERGK 589
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
A +LF +++E ++ PN VTF+++L AC+ +G + +G + S P L H
Sbjct: 590 GAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEG--LEYFNSMKYKYSIMPNLKH 647
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+C+ DLLGR GKL+EA +F+Q MP+K D +WG LL +C+IH ++E+GE A +F+ +
Sbjct: 648 YACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDD 707
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
S Y+ ++N YA G+WD VA +R MM++N + PG S + G F + D +H
Sbjct: 708 TTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFH 767
Query: 607 AE 608
+
Sbjct: 768 PQ 769
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 226/446 (50%), Gaps = 8/446 (1%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+ + S FV+ L A+ +F M R++ SWN ++ G+A+ G + L L++ M VG+
Sbjct: 144 GNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGV 203
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ D T + + +L + +H I G ++DV V N I+ Y KC D+ A L
Sbjct: 204 KPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARL 263
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF + R R +SWN+M++G + L + M+ D+ T+ S++++
Sbjct: 264 VFDKMPNRDR--ISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELL 321
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
GR +H + + F D S+ N+LI MYS G I+ A +F R VSWTAMI
Sbjct: 322 GDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMI 381
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SGY +AL + MEA G +PD +T+ ++S C L++G A GL
Sbjct: 382 SGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLV 441
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V N+LIDMY+KC I A E+F++ EK +VSWT++I G +N EAL F ++
Sbjct: 442 SYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM 501
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ L+PN VT + VL AC G L G I G+S++ + + + D+ R
Sbjct: 502 IR-RLKPNSVTLVCVLSACARIGALTCGKEIH-AHALRTGVSFDGFMP--NAILDMYVRC 557
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLL 523
G+++ A + Q + + W LL
Sbjct: 558 GRMEYA--WKQFFSVDHEVTSWNILL 581
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 188/354 (53%), Gaps = 14/354 (3%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N +S + + +L A VF +E+R + SWN +V G FD++L+ Y M++ G
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKR--NLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ DV T +L + LV+GR +H H I YGF+ DV V+N LI+MY KCGD+++AR
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
++FD + +R R+SW AMISGY + G E LRLF M PDL+T+ S+I+ C G
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
LG+ Y + + N+LI MYS G I +A +F + +VSWT MI+
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382
Query: 420 G---CALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
G C + + +E +++ME + + P+ +T VL AC+ L+ G + +
Sbjct: 383 GYENCLMPQKALET----YKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQK 438
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+SY+ + + D+ + + +AL+ S ++ + W +++ +I+
Sbjct: 439 GLVSYSIVAN---SLIDMYAKCKCIDKALEIFHST-LEKNIVSWTSIILGLRIN 488
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%)
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
L + + N L+SM+ + G++ A +F + R SW ++ GYA+ G DEAL L+ M
Sbjct: 139 LSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRM 198
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G PD+ T ++ CG L G+ + G + +V V NALI MY KCG +
Sbjct: 199 LWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDV 258
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
AR +F +P + +SW MI+G NG +E L LF +++ + P+ +T +V+ AC
Sbjct: 259 NTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITAC 318
Query: 457 THTG 460
G
Sbjct: 319 ELLG 322
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 187/625 (29%), Positives = 308/625 (49%), Gaps = 25/625 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I N+ + LF +M ++ I+P++++ + + + + +H H++
Sbjct: 166 WTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVI 225
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + K L A+++F+++ RD ++NA+L G+++ GF +
Sbjct: 226 KLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAIN 285
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ M+ VG + T + A I + + VH F + +V V N + Y+
Sbjct: 286 LFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYS 345
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D + A +F + E +S+N +V + + +SL ++ + + GF
Sbjct: 346 KHDRVVEASKLFYEMPEV--DGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPF 403
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+LLS L GR +HS I ++ V N+L+ MY+KCG+ A +F +
Sbjct: 404 ATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAI 463
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
++ V WTAMIS Y QKG ++ L+LF M+ A D T S++ C +L LGK
Sbjct: 464 QSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQL 523
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
++ G NV +AL+DMY+KCGSI DA ++F +P + VSW +I+ A NG+
Sbjct: 524 HSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDG 583
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD---KGISYNPEL 484
L LF +++ L+P+ V+ L++L AC+H G +E+G +QY D + P+
Sbjct: 584 DCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEG-----LQYFDSMTRIYKLVPKK 638
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+ D+L R G+ EA + MP + D +W ++L +C IH N E+ + A LF
Sbjct: 639 EHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFN 698
Query: 545 LEP-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
++ AAPYV M+N YA G WD V ++ M+ VKK P S I KT FTA D
Sbjct: 699 MKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTAND 758
Query: 604 RYHAESELTYPVLDCLALHSREEAY 628
+ H + LD L ++ Y
Sbjct: 759 KTHPQMREIMKKLDELEEKMVKKGY 783
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 223/486 (45%), Gaps = 20/486 (4%)
Query: 52 PNNLTFPFIAKACAKLSDL-----IYSQMIHGHIVKSP-----FVKCDRLDCAYKIFDEM 101
PN F+ K+ + DL ++ +M H +I + ++K L A +FD M
Sbjct: 99 PNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSM 158
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
R +W ++ G+AQ LF M GI D V++ L ++ ++
Sbjct: 159 FQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVR 218
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
VHS I +G D+ + V N+ + SY K L +A +F I E R V++N+++ G +
Sbjct: 219 QVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPE--RDSVTFNALLTGYSK 276
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+++N + M G+R T ++L++ + + + G+ VH + F +V V
Sbjct: 277 EGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFV 336
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
N L+ YSK + A LF + + +S+ +++ YA G + E+L LF ++ G
Sbjct: 337 ANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGF 396
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
+++S S L++G+ + ++V N+L+DMY+KCG G+A
Sbjct: 397 DRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANR 456
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F L + V WT MI+ G + L LF ++ + + T+ ++++AC
Sbjct: 457 IFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLAS 516
Query: 462 LEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
L G + II G Y + S + D+ + G +K+AL Q MP+++ W
Sbjct: 517 LTLGKQLHSHII-----GSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVS-W 570
Query: 520 GTLLCA 525
L+ A
Sbjct: 571 NALISA 576
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 151/352 (42%), Gaps = 65/352 (18%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA---------- 298
+L+++ P+ + V + I GF+ + N L+ + + GD++ A
Sbjct: 74 NLVTTLTAPKPHLH---VDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHK 130
Query: 299 ---------------------RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
R LFD + RT V+WT +I GYAQ EA LF M
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G PD V++ +++SG + ++ + ++ G ++V N+L+D Y K S+G
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLG 250
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A +LF +PE+ V++ ++ G + G EA++LF ++ E+ RP TF A+L A
Sbjct: 251 LAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGI 310
Query: 458 HTGFLEKG-------------WAISIIQ-------YDDKGISYN------PELD--HYSC 489
+E G W + + D+ + + PE+D Y+
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370
Query: 490 MADLLGRKGKLKEALDFVQSMPIKS---DAGIWGTLLCACKIHLNIEIGEYV 538
+ G++KE+L+ + + + TLL I LN++IG +
Sbjct: 371 LVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQI 422
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 317/614 (51%), Gaps = 19/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W + I VN +++++ L+LF M Q ++ + KAC ++ + +++HG
Sbjct: 124 WTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFS 183
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VKS ++K +++ ++F +M R+V SW A++ G G+ L
Sbjct: 184 VKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEAL 243
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M + + D T +A+ + L K++H+ I G D V NT + Y
Sbjct: 244 LYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMY 303
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC +F + ++ VVSW +++ + + ++ ++ M + + T
Sbjct: 304 NKCGKADYVMRLFEKM--KMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYT 361
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+++S+ G +H H + G +SV N+++++YSK G + SA ++F GI
Sbjct: 362 FAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGIT 421
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW+ +I+ Y+Q G EA M G P+ + S++S CG LE GK
Sbjct: 422 RKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ 481
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G+ MV +ALI MYSKCGS+ +A ++F + ++SWT MI G A +G
Sbjct: 482 VHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGY 541
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EA++LF ++ + L+P+ VTF+ VL AC+H G ++ G+ ++ ++ IS P +H
Sbjct: 542 SQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQIS--PSKEH 599
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y C+ DLL R G+L EA ++SMP +D +W TLL +C++H +++ G + A L +L+
Sbjct: 600 YGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLD 659
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+SA ++ +AN YA GRW A+IR +MK V K G S ++N K F A D+ H
Sbjct: 660 PNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAH 719
Query: 607 AESELTYPVLDCLA 620
+SE VL+ L+
Sbjct: 720 PQSEHITTVLELLS 733
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 193/426 (45%), Gaps = 18/426 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDE 100
L +Q KQ + N + + + ++L L+ G + KS + +FD+
Sbjct: 71 LIQQAKQEQLAQNAYSVHNMLELNSELKQLVK----QGQLCKSRY-----------MFDK 115
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSL 159
M RD SW ++ G+ L LF NM + G+Q D + +A ++
Sbjct: 116 MTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICF 175
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ +H F + G+ V V + I Y K ++ VF + + R VVSW +++AG
Sbjct: 176 GELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTK--RNVVSWTAIIAGL 233
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ ++L ++ M + D T L + L G+ +H+ I GFD
Sbjct: 234 VHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESS 293
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
VINTL +MY+KCG D LF+ + VSWT +I+ Y QKG+ + A+ F M +
Sbjct: 294 FVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKS 353
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ T ++IS C + G+ + GL D + V N+++ +YSK G + A
Sbjct: 354 NVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSA 413
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F+ + K ++SW+T+IA + G EA D + +PN +VL C
Sbjct: 414 SLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSM 473
Query: 460 GFLEKG 465
LE+G
Sbjct: 474 ALLEQG 479
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 119/259 (45%), Gaps = 16/259 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL + + W + I V K E + F++M+++++ PN TF + ACA L+
Sbjct: 314 RLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLA 373
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ + IHGH+++ + + K L A +F + +D+ SW+ ++
Sbjct: 374 IAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIA 433
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
++Q G+ + MR G + + + + L K VH+ + IG+D
Sbjct: 434 VYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDH 493
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V + IS Y+KC ++ A +F G+ ++ ++SW +M+ G +++N +
Sbjct: 494 EAMVHSALISMYSKCGSVEEASKIFNGM--KINNIISWTAMINGYAEHGYSQEAINLFEK 551
Query: 235 MMYNGFRLDVTTVVSLLSS 253
+ G + D T + +L++
Sbjct: 552 ISSVGLKPDYVTFIGVLTA 570
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 21/296 (7%)
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAG 340
+N+ + K G + +R +FD + R +SWT +I+GY D EAL LF M G
Sbjct: 93 LNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPG 152
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D + + CG + G+ ++ GL ++V V +ALIDMY K G I
Sbjct: 153 LQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGC 212
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F + ++ VVSWT +IAG G +EAL F ++ + + TF L+A +
Sbjct: 213 RVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSS 272
Query: 461 FLEKGWAI---SIIQ-YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
L G AI +I Q +D+ N +A + + GK + + M + D
Sbjct: 273 LLHHGKAIHTQTIKQGFDESSFVIN-------TLATMYNKCGKADYVMRLFEKMKMP-DV 324
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
W TL+ ++ E+ ++ + +P NKY AN+
Sbjct: 325 VSWTTLITT---YVQKGEEEHAVEAFKRMRKSNVSP-----NKYTFAAVISACANL 372
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 300/602 (49%), Gaps = 18/602 (2%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFV 86
LF++M+ + PN TF + A + L D ++ H +K + +
Sbjct: 95 LFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYC 154
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
K A K+FD M R+ SW M+ G+A L LF MR +
Sbjct: 155 KAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTS 214
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ A + ++ K +H + G+ + VSV N ++ YAKC L A F ++
Sbjct: 215 VLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDK- 273
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++W++M+ G D +L + M +G R T V ++++ A +G+ V
Sbjct: 274 -NSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQV 332
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + + GF+ + V+ L+ MY+KC I AR FD + + V WT+MI GY Q G+
Sbjct: 333 HDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGEN 392
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
++AL L+ ME G LP+ +T+ S++ C ALE GK G V + +AL
Sbjct: 393 EDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSAL 452
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
MY+KCG + D +F +P + V+SW MI+G + NG EAL+LF ++ +P+
Sbjct: 453 STMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDY 512
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
VTF+ +L AC+H G +E+GW + +D+ G+ +P ++HY+CM D+L R GKLKEA++F
Sbjct: 513 VTFVNILSACSHMGLVERGWGYFRMMFDEFGM--DPRVEHYACMVDILSRAGKLKEAIEF 570
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+S I +W +L AC+ + N E+G Y L +L ++ YV +++ Y+ GRW
Sbjct: 571 TESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRW 630
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
+ V +R MMK V K PG S + F +D+ H + + L L+ ++E
Sbjct: 631 EDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDE 690
Query: 627 AY 628
Y
Sbjct: 691 GY 692
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 237/489 (48%), Gaps = 25/489 (5%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP-------------FVKCDRLDCAYKIF 98
P+N +F L + +H I+KS + KC RL A +F
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVF 63
Query: 99 DEMAVRDVASWNAMLVGFAQMG--FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+ + +DV SWN ++ G++Q G +V+ LF MR + T G+ AA
Sbjct: 64 ERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVD 123
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ + H+ I + DV V ++ ++ Y K A VF + E R VSW +M+
Sbjct: 124 AAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPE--RNSVSWATMI 181
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G ++L +R M + S+LS+ PE + G+ +H + G
Sbjct: 182 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 241
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
VSV N L++MY+KCG +D A F+ D+ ++W+AMI+GYAQ GD D+AL+LF +M
Sbjct: 242 SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSM 301
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+G P T + +I+ C GA GK +Y G + + V AL+DMY+KC SI
Sbjct: 302 HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DAR+ F L E +V WT+MI G NGE +AL L+ ++ + PN +T +VL+AC
Sbjct: 362 VDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKAC 421
Query: 457 THTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
+ LE+G I ++Y + E+ S ++ + + G LK+ + MP +
Sbjct: 422 SSLAALEQGKQIHARTVKY-----GFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR- 475
Query: 515 DAGIWGTLL 523
D W ++
Sbjct: 476 DVISWNAMI 484
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 204/424 (48%), Gaps = 34/424 (8%)
Query: 4 SSLPPRLNRIY-----RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFP 58
+ L P +++ R+S W + I ++ A + L LFR M++ + N F
Sbjct: 156 AGLTPEARKVFDTMPERNSV--SWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFT 213
Query: 59 FIAKA--------------CAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVR 104
+ A C + + + S + G+ + + + KC LD A + F+ + +
Sbjct: 214 SVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDK 273
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+ +W+AM+ G+AQ G + L+LF +M L GI+ T +G+ A K VH
Sbjct: 274 NSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVH 333
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ + +G ++ + V + YAKC + A F ++E +V W SM+ G +
Sbjct: 334 DYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE--PDIVLWTSMIGGYVQNGE 391
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+D+L+ Y M G + T+ S+L + AL QG+ +H+ + YGF L+V + +
Sbjct: 392 NEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSA 451
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L +MY+KCG + ++F + R +SW AMISG +Q G EAL LF M+ G PD
Sbjct: 452 LSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPD 511
Query: 345 LVTVLSMISGCGQSGALELGKW------FDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
VT ++++S C G +E G W FD + G+ V ++D+ S+ G + +
Sbjct: 512 YVTFVNILSACSHMGLVERG-WGYFRMMFDEF----GMDPRVEHYACMVDILSRAGKLKE 566
Query: 399 AREL 402
A E
Sbjct: 567 AIEF 570
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 300/589 (50%), Gaps = 31/589 (5%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWN 110
EPN ++ I KA AK S + HI A ++FDE+ D S+N
Sbjct: 71 EPNVFSYNVIVKAYAKDSKI--------HI-------------ARQLFDEIPQPDTVSYN 109
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ G+A + LF MR +G + D T+ GL A + L+K +H F +
Sbjct: 110 TLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSG 167
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G D+ SV N +++ Y+K L+ A VF G++E LR VSWNSM+ + +L
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE-LRDEVSWNSMIVAYGQHKEGAKALA 226
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
Y+ M++ GF++D+ T+ S+L++ + L+ GR H I GF + V + LI YS
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYS 286
Query: 291 KCGDIDS---ARVLFDGICDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGELPDLV 346
KCG D + +F I V W MISGY+ +L +EA++ F M+ G PD
Sbjct: 287 KCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDC 346
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYA 405
+ + + S C + K A + N + V NALI +Y K G++ DAR +F
Sbjct: 347 SFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR 406
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+PE VS+ MI G A +G EAL L+ ++++ + PN++TF+AVL AC H G +++G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ PE +HYSCM DLLGR GKL+EA F+ +MP K + W LL A
Sbjct: 467 Q--EYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C+ H N+ + E A L ++P +A PYV +AN YA +W+ +A++R M+ +++K P
Sbjct: 525 CRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKP 584
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
G S + K F AED H L+ + ++ Y KW
Sbjct: 585 GCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKW 633
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 207/454 (45%), Gaps = 33/454 (7%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+ I + T++ +N+ I + E ++LF++M++ E + T + AC D
Sbjct: 97 FDEIPQPDTVS-YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVD 155
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIF-----------------DEMAVRDVASWNAM 112
LI + +H V F ++ A+ + DE+ RD SWN+M
Sbjct: 156 LI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL--RDEVSWNSM 211
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
+V + Q L L+ M G + D T+ + A HL + H I G
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 173 DADVSVCNTWISSYAK---CDDLKMAELVFCGIEERLRT-VVSWNSMVAGCTYGDKF-DD 227
+ V + I Y+K CD + +E VF +E L +V WN+M++G + ++ ++
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVF---QEILSPDLVVWNTMISGYSMNEELSEE 328
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLI 286
++ +R M G R D + V + S+ + Q + +H I + +SV N LI
Sbjct: 329 AVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALI 388
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
S+Y K G++ AR +FD + + VS+ MI GYAQ G EAL L+ M +G P+ +
Sbjct: 389 SLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKI 448
Query: 347 TVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T ++++S C G ++ G+ +F+ + ++ + +ID+ + G + +A A
Sbjct: 449 TFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDA 508
Query: 406 LPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLM 438
+P K V+W ++ C + A ++LM
Sbjct: 509 MPYKPGSVAWAALLGACRKHKNMALAERAANELM 542
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 158/352 (44%), Gaps = 36/352 (10%)
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
F T L ++ + L KS+H+ + V + + N +++ Y+KC L A F
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 201 GIEE-----------------------------RLRTVVSWNSMVAGCTYGDKFDDSLNF 231
EE VS+N++++G + ++
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
++ M GF +D T+ L+++ C + + + +H + GFD SV N ++ YSK
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 292 CGDIDSARVLFDGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
G + A +F G+ + R VSW +MI Y Q + +AL L+ M G D+ T+ S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG---SIGDARELFYALP 407
+++ L G+ F G N V + LID YSKCG + D+ ++F +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 408 EKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRPNRVTFLAVLQACTH 458
+V W TMI+G ++N E EA+ F Q+ + RP+ +F+ V AC++
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 304/628 (48%), Gaps = 21/628 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ W + N + LFRQM ++ P+ +TF + C +H
Sbjct: 105 TVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVH 164
Query: 78 GHIVK----------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
VK + + RLD A +F+E+ +D ++N ++ G+ + G
Sbjct: 165 AFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGL 224
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ LF MR G + T G+ +A + +L + +H + G D SV N
Sbjct: 225 YTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQ 284
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y+K D + +F + E VS+N +++ + +++++SLN +R M GF
Sbjct: 285 ILHFYSKHDRVLETRNLFNEMPEL--DFVSYNVVISSYSQAEQYEESLNLFREMQCMGFD 342
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
++LS +L GR VH I D + V N+L+ MY+KC D A ++
Sbjct: 343 RRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELI 402
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + R+ VSWTA+ISGY QKG L+LF M A D T +++ +L
Sbjct: 403 FKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASL 462
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
LGK + G +NV + L+DMY+KCGSI DA ++F +P++ VSW +I+
Sbjct: 463 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAY 522
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A NG+ A+ F ++++ L+P+ V+ L VL AC+H GF+E+G GI+
Sbjct: 523 ADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGIT-- 580
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P+ HY+CM DLLGR G+ EA + MP + D +W ++L AC+I+ N + E A
Sbjct: 581 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQ 640
Query: 542 LFKLEP-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
LF +E AA YV M+N YA G+W+ V +++ M+ +KK P S +N K F+
Sbjct: 641 LFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFS 700
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAY 628
+ D+ H + ++ L E Y
Sbjct: 701 SNDQTHPNGDEIVKKINELTTEIEREGY 728
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 228/495 (46%), Gaps = 25/495 (5%)
Query: 71 IYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+Y +M H + V S +VK L A +FD M R V +W ++ +A +
Sbjct: 66 VYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEA 125
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD--VSVCNTWI 183
+LF M D+VT L A + + VH+F + +G D + ++VCN +
Sbjct: 126 FKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLL 185
Query: 184 SSYAKCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
SY + L +A ++F EE L + V++N+++ G + ++++ + M +G +
Sbjct: 186 KSYCEVRRLDLACVLF---EEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKP 242
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T +L + V G+ +H + GF D SV N ++ YSK + R LF
Sbjct: 243 SDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLF 302
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ + + VS+ +IS Y+Q +E+L LF M+ G +M+S +L+
Sbjct: 303 NEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQ 362
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
+G+ A + V N+L+DMY+KC +A +F +L ++ VSWT +I+G
Sbjct: 363 VGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYV 422
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF----LEKGWAISIIQYDDKGI 478
G L LF ++ +LR ++ TF VL+A GF L K II+ +
Sbjct: 423 QKGLHGAGLKLFTKMRGANLRADQSTFATVLKAS--AGFASLLLGKQLHAFIIRSGNLEN 480
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE--IGE 536
++ S + D+ + G +K+A+ + MP + +A W L+ A + + E IG
Sbjct: 481 VFSG-----SGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAYADNGDGEAAIGA 534
Query: 537 YVAYCLFKLEPHSAA 551
+ L+P S +
Sbjct: 535 FTKMIQSGLQPDSVS 549
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R V + I GF+ D N + + G + +A ++D + + VS MISGY +
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 324 GDL-------------------------------DEALRLFFAMEAAGELPDLVTVLSMI 352
GDL DEA +LF M + LPD VT +++
Sbjct: 89 GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVM--VCNALIDMYSKCGSIGDARELFYALPEKI 410
GC + +A G N+ VCN L+ Y + + A LF + +K
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKD 208
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
V++ T+I G +G + EA+ LF ++ + +P+ TF VL+A
Sbjct: 209 SVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 204/666 (30%), Positives = 336/666 (50%), Gaps = 54/666 (8%)
Query: 16 SSTINQWNSQIR---EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
SS+ N + + ++ EA N+ + K L ++ + P + + KL DL
Sbjct: 2 SSSSNYYTAALKFCCEARNRAQVKK---LHCRIIRTLTNPETFLYNNLINTYGKLGDLKN 58
Query: 73 SQMIHGHIVKSPFVKCDRLDCAY----------KIFDEMAVRDVASWNAMLVGFAQMGFL 122
++ + HI + + L AY ++FD M DV SWN++L G+A G +
Sbjct: 59 ARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLI 118
Query: 123 ENVLRLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVH----SFG----IHIGV 172
+R+ YNM L + + +T + + + + L + +H FG + +G
Sbjct: 119 SESVRV-YNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGS 177
Query: 173 -----------------------DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ ++ V NT I+ +C + AE +F + E+
Sbjct: 178 PLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEK--DS 235
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+SW +++ G T F ++++ ++ M GF +D T S+L++ AL +G+ +H++
Sbjct: 236 ISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAY 295
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I + ++ V + L+ MY KC ++ A +F + + +SWTAM+ GY Q G +EA
Sbjct: 296 IIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEA 355
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+R+F M+ PD T+ S+IS C +LE G F A + GL V V NALI +
Sbjct: 356 VRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITL 415
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KCGS+ A +LF+ + + VSWT +++G A G+ E + LF ++ + P+ VTF
Sbjct: 416 YGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTF 475
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+ VL AC+ G +EKG+ + I+ P DHY+CM DLL R G+L+EA +F+
Sbjct: 476 VGVLSACSRAGLVEKGYHYFECMVKEHRIT--PIPDHYTCMIDLLSRAGRLEEAKNFINQ 533
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
MP DA W TLL +C+++ N+EIG++ A L KLEP + A Y+ +++ YA G+WD V
Sbjct: 534 MPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDV 593
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
A +R M+ VKK PG S K F+A+DR S+ Y L+ L L EE Y
Sbjct: 594 AKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYV 653
Query: 630 SHLKWI 635
+ ++
Sbjct: 654 PDMSFV 659
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R R + W + + + + + +F M++N+I P++ T + +CA L+ L
Sbjct: 329 RKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLE 388
Query: 72 YSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
HG + S + KC L+ A+++F EM +RD SW A++ G+A
Sbjct: 389 EGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYA 448
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
Q G + LF M GI D VT +G+ A A
Sbjct: 449 QFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRA 485
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 204/639 (31%), Positives = 325/639 (50%), Gaps = 52/639 (8%)
Query: 32 KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS--DLIYSQMI-HGHIVK------ 82
+ + +KT+ + Q+K P + T + C+ + L+++Q+I HG +
Sbjct: 23 QTQINKTI--WHQLK----SPTHQTLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGK 76
Query: 83 --SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
S V+ L A+ +FD++ + +N ++ G++ L LF M G +
Sbjct: 77 LLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPN 136
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T + +A VH+ I +G+ V N +++Y C + A VF
Sbjct: 137 QFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFD 196
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
I +R T+VSWNSM+AG + D+++ ++ M+ G DV T+VSLLS+ L
Sbjct: 197 DISDR--TIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNL 254
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
GR VH + + G ++D V N LI MY+KCG + A+ +FD + D+ VSWT+M++ Y
Sbjct: 255 DLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAY 314
Query: 321 A-------------------------------QKGDLDEALRLFFAMEAAGELPDLVTVL 349
A Q+G EA+ LF M +G +PD T++
Sbjct: 315 ANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLV 374
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S++S C +G L LGK Y C + +V +CN+LIDMY+KCG++ A ++F+ +PEK
Sbjct: 375 SILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEK 434
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
VVSW +I AL+G EA+++F + L P+ +TF +L AC+H+G ++ G
Sbjct: 435 NVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYF 494
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
I IS P ++HY+CM DLLGR G L EA+ +Q MP+K D +WG LL AC+I+
Sbjct: 495 DIMISTFRIS--PGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIY 552
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+EI + + L +L ++ YV ++N Y+ RWD + IR +M + +KK S
Sbjct: 553 GNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISF 612
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
I+G F +D+ H S Y +LD L H + Y
Sbjct: 613 IEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLKSVGY 651
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 230/464 (49%), Gaps = 45/464 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N IR N N+ K+LLLFRQM PN TFPF+ KACA + ++H +
Sbjct: 105 YNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAI 164
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + +V C + A ++FD+++ R + SWN+M+ G+++MGF + +
Sbjct: 165 KLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAIL 224
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M +G++AD T++ L A+ +L L + VH + + GV+ D V N I YA
Sbjct: 225 LFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYA 284
Query: 188 KCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVAG 218
KC L+ A+ VF + ++ ++ VVSWNS++
Sbjct: 285 KCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICC 344
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++ +++ + M +G D T+VS+LS L G+ H + +
Sbjct: 345 LVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVS 404
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V++ N+LI MY+KCG + +A +F G+ ++ VSW +I A G +EA+ +F +M+A
Sbjct: 405 VTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQA 464
Query: 339 AGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+G PD +T ++S C SG +++G+ +FD + + V ++D+ + G +G
Sbjct: 465 SGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLG 524
Query: 398 DARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+A L +P K VV W ++ C + G A + QL+EL
Sbjct: 525 EAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLEL 568
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 155/398 (38%), Gaps = 90/398 (22%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI WNS I + +LLF++M Q +E + T + A +K +L + +H
Sbjct: 202 TIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVH 261
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+IV + + KC L A +FD+M +DV SW +M+ +A G +E
Sbjct: 262 LYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVE 321
Query: 124 NVLR-------------------------------LFYNMRLVGIQADFVTVMGLTQAAI 152
N ++ LF+ M + G+ D T++ +
Sbjct: 322 NAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCS 381
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+ L+L K H + + V++CN+ I YAKC L+ A +F G+ E + VVSW
Sbjct: 382 NTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPE--KNVVSW 439
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N ++ ++++ ++ M +G D T LLS+
Sbjct: 440 NVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSAC------------------ 481
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-----WTAMISGYAQKGDLD 327
S G +D R FD + R+S + M+ + G L
Sbjct: 482 -----------------SHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLG 524
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
EA+ L M PD+V +++ C G LE+ K
Sbjct: 525 EAMTLIQKMPVK---PDVVVWGALLGACRIYGNLEIAK 559
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 182/500 (36%), Positives = 265/500 (53%), Gaps = 4/500 (0%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFA--QMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
L A ++FD VRD WN +L + Q+ + L L+ MR G+ D T +
Sbjct: 68 LAYARRVFDATPVRDAYMWNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVL 127
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
A A+ L L ++VH + + D V + I+ Y + ++ AELVF RT
Sbjct: 128 PACAAARELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRT 187
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
VVSW SMVAG F +++ + M+ G + T++S L E L G +VH
Sbjct: 188 VVSWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHG 247
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
I GFD ++ + N LI+MY KCG I A+ LF+G+ R+ SW M++ Y Q D+ E
Sbjct: 248 FVIRLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVE 307
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
A++ F M D VT++S++S C +SGAL+ GKW A + GL + + N L+D
Sbjct: 308 AIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVD 367
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+KCG I AR +F L + VVSW+ MI+ A +G EAL LF + +RPN T
Sbjct: 368 MYAKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFT 427
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F AVL AC H+G +E+G D +S P L+HY+CM D+LGR G+L EA + ++
Sbjct: 428 FTAVLVACGHSGLVEEGLKHFNSILSDYQMS--PTLEHYACMVDMLGRAGRLIEAYEIIR 485
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
M + D +WG L CK+H N+E+ E+VA LF+ + YV M+N Y G
Sbjct: 486 GMSLCPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKD 545
Query: 569 VANIRTMMKRNQVKKFPGQS 588
+R MK ++ K G+S
Sbjct: 546 AERMRWAMKEMELNKTAGRS 565
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 237/474 (50%), Gaps = 41/474 (8%)
Query: 11 NRIYRSSTIN---QWNSQIREAVNKNEAHK--TLLLFRQMKQNDIEPNNLTFPFIAKACA 65
R++ ++ + WN+ +R + +H TL L+++M+ + P++ T+P + ACA
Sbjct: 72 RRVFDATPVRDAYMWNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACA 131
Query: 66 KLSDLIYSQMIHGHIVK-----SPFVKCDRLDCAYK---------IFDEM--AVRDVASW 109
+L + +HG +V+ FV + ++ +F E + R V SW
Sbjct: 132 AARELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSW 191
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
+M+ G+ Q + + LF M G+ + +T++ + L + VH F I
Sbjct: 192 TSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIR 251
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
+G DA++ + N I+ Y KC + MA+ +F G+ R++ SWN+MVA +++
Sbjct: 252 LGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPA--RSLASWNTMVAMYEQHADVVEAI 309
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
F+R M+ D T+VS+LS+ AL G+ VH ++G D D + N L+ MY
Sbjct: 310 KFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMY 369
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+KCG+I SAR +FD + R+ VSW+AMIS YA G +EAL+LF M+ G P+ T
Sbjct: 370 AKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFT 429
Query: 350 SMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-- 406
+++ CG SG +E G K F++ + + ++DM + G + +A E+ +
Sbjct: 430 AVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSL 489
Query: 407 -PEKIVVSWTTMIAGCALNG-----EFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
P+K V W +AGC L+G EFV A DLF N VTF ++
Sbjct: 490 CPDKCV--WGAFLAGCKLHGNLELAEFV-ARDLFQS------GSNDVTFYVLMS 534
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 305/600 (50%), Gaps = 25/600 (4%)
Query: 22 WNSQI-REAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I +VN + F + ++ I+PN ++ + A L D ++ IH +
Sbjct: 228 WNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYS 287
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + KC + +++F+E ++ SWN+++ G A G + L
Sbjct: 288 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 347
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M G Q + VT+ + + + K +H F + +G + D+ + N+ I Y
Sbjct: 348 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMY 407
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK A +F ++ R +VSWN+M+A +++ F M G + T
Sbjct: 408 AKSGHSTEASTIFHNLDRR--NIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVT 465
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
++L + L G+ +H+ G+ G D+ V N+LI MY+KCG + SAR +F+
Sbjct: 466 FTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TS 524
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ VS+ +I GY++ D ++L LF M G+ PD+V+ + +IS C AL+ GK
Sbjct: 525 RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKE 584
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
A L ++ V N+L+D Y+KCG I A LF + K V SW TMI G + GE
Sbjct: 585 VHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGE 644
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS--YNPEL 484
A+ +F + + ++ + V+++AVL AC+H G +E+GW QY + ++ P
Sbjct: 645 LETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGW-----QYFSEMLAQRLEPTE 699
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
HY+CM DLLGR G ++EA +Q +PI DA IWG LL AC+I+ N+E+G A LF+
Sbjct: 700 MHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFE 759
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P Y+ ++N YA GRWD IR +MK KK PG S I + F AE+R
Sbjct: 760 LKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 819
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 251/522 (48%), Gaps = 31/522 (5%)
Query: 22 WNSQIR-EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ IR ++ N + +M + ++ ++ TFPF+ K C+ D+ +HG +
Sbjct: 126 WNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVV 185
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K F C L+ A ++FDEM RDV SWN ++ + G
Sbjct: 186 FKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEAR 245
Query: 127 RLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
++ M L I+ + V+V+ L + + + + +H + + +G+D+ V+ CN + +
Sbjct: 246 NYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDA 305
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC +K VF E + VSWNS++ G + D+LN +R M+ G + +
Sbjct: 306 YGKCGSVKALWQVFNETVE--KNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSV 363
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ S+L V E G+ +H + G + D+ + N+LI MY+K G A +F +
Sbjct: 364 TISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNL 423
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R VSW AMI+ YA EA+R M+ GE P+ VT +++ C + G L GK
Sbjct: 424 DRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGK 483
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
GL ++ V N+LIDMY+KCG + AR +F K VS+ +I G +
Sbjct: 484 EIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETD 542
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY----N 481
+ +++L+LF ++ L +P+ V+F+ V+ AC + L++G + + + S+ N
Sbjct: 543 DCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSN 602
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
LD Y+ + G++ A + K D W T++
Sbjct: 603 SLLDFYT-------KCGRIDIACRLFNQILFK-DVASWNTMI 636
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 292/572 (51%), Gaps = 39/572 (6%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FDE+ ++ WN M+ G++++ F + + L+ M G++ D T L +
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--CGIEERLRTVVS 211
L + +H + G+ +V V + Y C L A VF C + V++
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD----VIT 207
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN +++ KF++S + M T+V +LS+ + L G+ VHS+
Sbjct: 208 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 267
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSA-------------------------------RV 300
+ + ++ + N +I MY+ CG++DSA R
Sbjct: 268 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 327
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
FD + ++ VSWTAMI GY + EAL LF M+A PD T++S+++ C GA
Sbjct: 328 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 387
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LELG+W Y +K+++ V NALIDMY KCG + A +F + ++ +WT MI G
Sbjct: 388 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 447
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A+NG +ALD+F +++ + P+ +T++ VL ACTHTG ++KG + GI
Sbjct: 448 LAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE- 506
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P + HY C+ DLL R G+LKEA + +++MPIK+++ +WG LL C+++ ++ E V
Sbjct: 507 -PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVK 565
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+ +LEP + A YV + N YA RW+ + +R MM +KK PG SL +NG+ F
Sbjct: 566 QILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFV 625
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
A DR H +++ LD + + YS +
Sbjct: 626 AGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDI 657
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 232/508 (45%), Gaps = 51/508 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR + + L+ +M + ++P+ TFPF+ K + L Y + +HGH++
Sbjct: 107 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 166
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K ++ C +LD A +FD DV +WN ++ + ++G E R
Sbjct: 167 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 226
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + VT++ + A K L K VHS+ + V++++ + N I YA
Sbjct: 227 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 286
Query: 188 KCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVAG 218
C ++ A +F + R + VSW +M+ G
Sbjct: 287 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 346
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++F ++L +R+M + D T+VS+L++ AL G + ++ D
Sbjct: 347 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKND 406
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ V N LI MY KCGD+D A +F + R + +WTAMI G A G ++AL +F M
Sbjct: 407 LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLK 466
Query: 339 AGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
A LPD +T + ++S C +G ++ G K+F G++ N+ L+D+ ++ G +
Sbjct: 467 ASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLK 526
Query: 398 DARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL--AVLQ 454
+A E+ +P K + W ++AGC + E A + Q++EL+ V L +
Sbjct: 527 EAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYA 586
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNP 482
AC L + + + DKGI P
Sbjct: 587 ACKRWNDLRELRQMMM----DKGIKKXP 610
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 134/309 (43%), Gaps = 17/309 (5%)
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCP-----------EALVQGRLVHSHGIHYGFD 276
+L +RH+ + S L SF P E++ Q + VH I G +
Sbjct: 9 TLLHHRHVKKPKQMTTIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLN 68
Query: 277 LDVSVINTLISM--YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ + N +++ + GD AR LFD I + W MI GY++ + L+
Sbjct: 69 ANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYL 128
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M G PD T + G + ALE G+ + GL+ NV V AL+ MY CG
Sbjct: 129 EMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCG 188
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ AR +F P+ V++W +I+ G+F E+ LF + + + P VT + VL
Sbjct: 189 QLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLS 248
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+ L G + + K + N L+ + M D+ G++ AL +SM
Sbjct: 249 ACSKLKDLRTGKKVHSYVKNCK-VESNLVLE--NAMIDMYADCGEMDSALGIFRSMN-NR 304
Query: 515 DAGIWGTLL 523
D W T++
Sbjct: 305 DIISWTTIV 313
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 294/567 (51%), Gaps = 41/567 (7%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF------VTVMGLTQA 150
+F M RD+ S+NA++ GF+ G +R++ L +QAD +T+ + A
Sbjct: 94 LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVY----LALLQADSSVRPSRITMSTMVMA 149
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF----------- 199
A +L K H + +G A+ V + + YAK + A+ F
Sbjct: 150 ASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMY 209
Query: 200 ---------CGIEERLRTV---------VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
C + E R + ++W +MV G T ++L +R M + G
Sbjct: 210 NTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIA 269
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D T S+L++ AL QG+ +H++ I +D +V V + L+ MYSKC I A +
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETV 329
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + + +SWTA+I GY Q G +EA+R+F M+ G PD T+ S+IS C +L
Sbjct: 330 FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASL 389
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E G F A GL + V NAL+ +Y KCGSI DA LF + VSWT +++G
Sbjct: 390 EEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGY 449
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A G E +DLF +++ ++P+ VTF+ VL AC+ GF+EKG + D GI
Sbjct: 450 AQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIV-- 507
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P DHY+CM DL R GKLKEA +F++ MP+ DA WGTLL AC++ ++EIG++ A
Sbjct: 508 PIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAEN 567
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +++P + A YV + + +A G+W+ VA +R M+ QVKK PG S K F+A
Sbjct: 568 LLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSA 627
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
+D+ H S+ Y L+ L EE Y
Sbjct: 628 DDQSHPCSKGIYEKLEWLNSKMLEEGY 654
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 189/376 (50%), Gaps = 14/376 (3%)
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
++Y+ MI G ++C ++ A ++F+ M RD +W M+ GF Q G L +F
Sbjct: 207 VMYNTMITG------LLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIF 260
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
MR GI D T + A L K +H++ I D +V V + + Y+KC
Sbjct: 261 RRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKC 320
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
+K+AE VF + + ++SW +++ G ++++ + M +G D T+ S
Sbjct: 321 RSIKLAETVFRRMT--CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGS 378
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
++SS +L +G H + G ++V N L+++Y KCG I+ A LFD +
Sbjct: 379 VISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD 438
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFD 368
+VSWTA++SGYAQ G E + LF M A G PD VT + ++S C ++G +E G+ +F
Sbjct: 439 QVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFH 498
Query: 369 NYACSGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
+ G+ D+ C +ID+YS+ G + +A E +P + W T+++ C L G
Sbjct: 499 SMQKDHGIVPIDDHYTC--MIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556
Query: 426 EFVEALDLFHQLMELD 441
+ L+E+D
Sbjct: 557 DMEIGKWAAENLLEID 572
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 147/364 (40%), Gaps = 59/364 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + L +FR+M+ I + TF I AC LS L + IH +I+
Sbjct: 240 WTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A +F M +++ SW A++VG+ Q G E +R
Sbjct: 300 RTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVR 359
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ GI D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 360 VFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYG 419
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F E VSW ++V+G + ++++ + M+ G + D T
Sbjct: 420 KCGSIEDAHRLF--DEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTF 477
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ +LS+ C S+ G ++ R F +
Sbjct: 478 IGVLSA--C---------------------------------SRAGFVEKGRSYFHSMQK 502
Query: 308 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ +T MI Y++ G L EA M PD + +++S C G +E
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMH---PDAIGWGTLLSACRLRGDME 559
Query: 363 LGKW 366
+GKW
Sbjct: 560 IGKW 563
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 13 IYRSST---INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
++R T I W + I + + + +F +M+++ I+P++ T + +CA L+
Sbjct: 329 VFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLAS 388
Query: 70 L----------IYSQMIHGHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + S ++H V + V KC ++ A+++FDEM+ D SW A++ G
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSG 448
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS-VHSFGIHIGVDA 174
+AQ G + + LF M G++ D VT +G+ A A + +S HS G+
Sbjct: 449 YAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVP 508
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
I Y++ LK AE F + W ++++ C
Sbjct: 509 IDDHYTCMIDLYSRSGKLKEAE-EFIKQMPMHPDAIGWGTLLSAC 552
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
N+ NAL+ + + D LF ++ ++ +VS+ +IAG + G +A+ ++ L+
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 439 ELD--LRPNRVTFLAVLQACTHTG--FLEKGWAISIIQ--YDDKGISYNPELDHYSCMAD 492
+ D +RP+R+T ++ A + G L K + I++ + +P +D Y+ M+
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 493 LLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLC 524
+ G K A D V S + + I G L C
Sbjct: 191 V----GDAKRAFDEVDSKNVVMYNTMITGLLRC 219
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 303/588 (51%), Gaps = 30/588 (5%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMA 102
FP + + C + ++MIHGHIVK+ F KC ++ A+K+FD +
Sbjct: 68 FPLL-QECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 126
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
R+V +W +L G+ Q L+LF M G T+ + A + + K
Sbjct: 127 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 186
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH++ I +D D S+ N+ S Y+K L+ A F I+E+ V+SW S+++ C
Sbjct: 187 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEK--DVISWTSVISSCCDN 244
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ SL+F+ M+ +G + + T+ S+LS+ L G +HS I G+ + +
Sbjct: 245 GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIK 304
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE-----------ALR 331
N+++ +Y KCG + A+ LF+G+ V+W AMI+G+A+ DL E AL
Sbjct: 305 NSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALA 364
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+F + +G PDL T S++S C ALE G+ G+ +V+V AL+ MY+
Sbjct: 365 MFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYN 424
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCGSI A + F +P + ++SWT+MI G A +G +AL LF + + ++PN+VTF+
Sbjct: 425 KCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVG 484
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
VL AC+H G ++ A+ + K + P +DH++C+ D+ R G+++EA D V M
Sbjct: 485 VLSACSHAGLADE--ALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN 542
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
+ + IW L+ C+ H ++G Y A L KL+P YV + N + GRW V+
Sbjct: 543 FEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSK 602
Query: 572 IRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+R +MK +V K S I K +F D+ H +S Y +L+ +
Sbjct: 603 VRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETV 650
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 228/485 (47%), Gaps = 47/485 (9%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
PR N +N W + + V + L LF +M + P+N T + AC+ L
Sbjct: 126 PRRN-------VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178
Query: 68 SDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
+ + + +H +++K S + K RL+ A K F + +DV SW +++
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G L F +M G++ + T+ + A L L +HS I +G
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 298
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDD----- 227
+ + + N+ + Y KC L A+ +F G+E +V+WN+M+AG D +D
Sbjct: 299 SSILIKNSIMYLYLKCGWLIEAQKLFEGMET--LNLVTWNAMIAGHAKMMDLAEDDVAAH 356
Query: 228 -----SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVS 280
+L ++ + +G + D+ T S+LS VC AL QG +H I G DV
Sbjct: 357 KSGSTALAMFQKLYRSGMKPDLFTFSSVLS--VCSNLVALEQGEQIHGQIIKSGVLADVV 414
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V L+SMY+KCG ID A F + RT +SWT+MI+G+A+ G +AL+LF M G
Sbjct: 415 VGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG 474
Query: 341 ELPDLVTVLSMISGCGQSG-ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ VT + ++S C +G A E +F+ +K + LIDMY + G + +A
Sbjct: 475 IKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA 534
Query: 400 RELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV-TFLAVLQA 455
++ + + P + + W+ +IAGC +G+ L + L L+P V T++++L
Sbjct: 535 FDVVHKMNFEPNETI--WSMLIAGCRSHGK--SDLGFYAAEQLLKLKPKDVETYVSLLNM 590
Query: 456 CTHTG 460
G
Sbjct: 591 HISAG 595
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 113/218 (51%)
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G R++ + LL + + R++H H + GF D+ V+ L+++YSKCG ++SA
Sbjct: 59 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+FD + R +WT +++GY Q AL+LF M AG P T+ +++ C
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
++E GK Y + + + N+L YSK + A + F + EK V+SWT++I
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+ C NG+ +L F ++ ++PN T +VL AC
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSAC 276
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 157/392 (40%), Gaps = 51/392 (13%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
+I + + W S I + +A ++L F M + ++PN T + AC + L
Sbjct: 224 KIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD 283
Query: 72 YSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
IH +K ++KC L A K+F+ M ++ +WNAM+ G A
Sbjct: 284 LGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHA 343
Query: 118 QMGFL-----------ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+M L L +F + G++ D T + + L + +H
Sbjct: 344 KMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQ 403
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I GV ADV V +S Y KC + A F +E RT++SW SM+ G
Sbjct: 404 IIKSGVLADVVVGTALVSMYNKCGSIDKASKAF--LEMPSRTMISWTSMITGFARHGLSQ 461
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSF----VCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+L + M G + + T V +LS+ + EAL L+ Y +
Sbjct: 462 QALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQK---QYNIKPVMDHF 518
Query: 283 NTLISMYSKCGDIDSARVLFDGI----CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
LI MY + G ++ A FD + + W+ +I+G G D F+A E
Sbjct: 519 ACLIDMYLRLGRVEEA---FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLG---FYAAEQ 572
Query: 339 AGEL--PDLVTVLSMISGCGQSGALELGKWFD 368
+L D+ T +S++ + + G+W D
Sbjct: 573 LLKLKPKDVETYVSLL-----NMHISAGRWKD 599
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 309/630 (49%), Gaps = 21/630 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ S I WN ++ E ++ + + F+ + ++ I +++T I A DL +
Sbjct: 855 QGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH ++KS F K + A K F D+ SWN M+ +AQ
Sbjct: 915 QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQA---AIHAKHLSLLKSVHSFGIHIGVDADVS 177
+ F ++ G++ D T+ + +A ++ +L VH + I G+ D
Sbjct: 975 LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V I Y+K + AE + G + + SWN+++ G +K +L + M
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDF--DLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G +D T+ + + + C L QG+ + ++ I GF+ D+ V + ++ MY KCGD+ +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A LF I V+WT MISGY + GD D AL ++ M +G PD T ++I
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE GK + V +L+DMY KCGS+ DA +F + + VV W M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
+ G A +G EAL+LF + ++P++VTF+ VL AC+H+G + + + G
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I+ PE++HYSC+ D LGR G+++EA + + SMP K+ A ++ LL AC+ + E +
Sbjct: 1333 IT--PEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKR 1390
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA L L+P ++ YV ++N YA +WD V + R MMK VKK PG S + K
Sbjct: 1391 VADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVH 1450
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSREEA 627
F +DR H ++ L Y ++ L REE
Sbjct: 1451 LFVVDDRSHPQASLIYEKIEDLMKRIREEG 1480
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 232/519 (44%), Gaps = 28/519 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN ++ V + + L F ++ P+ + SD+ ++ H V
Sbjct: 786 WNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQV 843
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
K+ +K D IF +WN L F G + + F + I D
Sbjct: 844 KAYAMKMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
VT++ + AA+ A L L + +H+ I V V N+ ++ Y+K + AE F
Sbjct: 895 VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL---SSFVCPE 258
E ++SWN+M++ + +++ +R ++ +G + D T+ S+L S+ E
Sbjct: 955 SPE--LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
G VH + I G D V LI +YSK G +D A L G D SW A++
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY + +AL F M G D +T+ + I G L+ GK YA G +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ V + ++DMY KCG + +A ELF + V+WTTMI+G NG+ AL ++H +
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR 1192
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHY--SCMADLL 494
++P+ TF +++A + LE+G I ++++ D LDH+ + + D+
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLD-------YSLDHFVGTSLVDMY 1245
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ G +++A + M ++ W +L H +++
Sbjct: 1246 CKCGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVD 1283
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 198/473 (41%), Gaps = 54/473 (11%)
Query: 73 SQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
S+ +HG+ VK F K + A +FD+M RD WN ML + +
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 119 MGFLENVLRLFYNMRLVGIQADFVT---VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F + LR F G DF V+G GV++D
Sbjct: 796 NSFQDEALRFFSAFHRSGFFPDFSNLHCVIG------------------------GVNSD 831
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
VS + K +KM ++ + +WN + + + +++ ++ +
Sbjct: 832 VSNNRKRHAEQVKAYAMKMFPF------DQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ + D T+V +LS+ V + L G +H+ I F V V N+L++MYSK G +
Sbjct: 886 LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+A F + +SW MIS YAQ EA+ F + G PD T+ S++ C
Sbjct: 946 YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Query: 356 --GQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
G G LG YA G+ ++ V ALID+YSK G + +A L + + +
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SW ++ G + + +AL+ F + E+ + + +T ++A L++G I
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYA 1125
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ +N +L S + D+ + G + AL+ + + D W T++
Sbjct: 1126 IK---LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG 1174
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 181/418 (43%), Gaps = 52/418 (12%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
++ ++DL + H IV S + KC L A ++FD+ + RD+
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 108 SWNAMLVGFAQMG--FLENVL---RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
+WN++L +AQ ENVL RLF +R G +T+ L + + + + + ++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH + + IG + D+ V ++ Y K + A L+F + E R V WN M+
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE--RDAVLWNVMLKAYVEN 796
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTT---VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
D++L F+ +GF D + V+ ++S V V ++ +
Sbjct: 797 SFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAM-------- 848
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
K D +F +W ++ + G + A+ F + +
Sbjct: 849 -----------KMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRS 888
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
D VT++ ++S + L+LG+ V V N+L++MYSK G + A
Sbjct: 889 TIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+ F PE ++SW TMI+ A N +EA+ F L+ L+P++ T +VL+AC+
Sbjct: 949 EKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS 1006
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 136/325 (41%), Gaps = 32/325 (9%)
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
++AI L L K H+ + G D + N I+ Y+KC L A VF +R
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR--D 676
Query: 209 VVSWNSMVAG-CTYGDK-FDDSLNFYRH---MMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+V+WNS++A + D +++ L +R + GF + T+ LL + +
Sbjct: 677 LVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
VH + + GF+LD+ V L+++Y K G + AR+LFD + +R V W M+ Y +
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
DEALR F A +G PD + +I G N S K +
Sbjct: 797 SFQDEALRFFSAFHRSGFFPDFSNLHCVIGGV-------------NSDVSNNRKRHAEQV 843
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
A A ++F + +W + G+ V A+D F L+ +
Sbjct: 844 KAY------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
+ VT + +L A L+ G I
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQI 916
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 36/259 (13%)
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+LGK + G + + N LI MYSKCGS+ AR++F ++ +V+W +++A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 421 CALNGE-----FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE-----KGWAISI 470
A + +E LF L E R+T +L+ C +GF++ G+A+ I
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 471 IQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
ELD + + ++ + G + +A MP + DA +W +L A
Sbjct: 747 ----------GFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKAY-- 793
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY-ALGGRWDGVANIRT----MMKRNQVKK 583
+E F H + + + +N + +GG V+N R +K +K
Sbjct: 794 ---VENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKM 850
Query: 584 FP---GQSLFHINGKTCTF 599
FP G ++F N K F
Sbjct: 851 FPFDQGSNIFAWNKKLTEF 869
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 195/650 (30%), Positives = 316/650 (48%), Gaps = 70/650 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + +K E K L MK + ++P+ +T+ + +
Sbjct: 259 WNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW---------------------NAI 297
Query: 82 KSPFVKCDRLDCAYKIFDEMA-VRD----VASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
S + + + + A K F EM ++D V SW A++ G Q G+ L +F M L G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKMA 195
++ + +T+ A + L + +H + I + +D+D+ V N+ + YAKC +++A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417
Query: 196 ------------------------------------ELVFCGIEERLRTVVSWNSMVAGC 219
E+ F GIE +++WN +V G
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP---DIITWNGLVTGF 474
Query: 220 T-YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
T YGD +L F++ M G + TT+ L++ L G+ +H + + +L
Sbjct: 475 TQYGDG-KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELS 533
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V + LISMYS C ++ A +F + R V W ++IS AQ G AL L M
Sbjct: 534 TGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNL 593
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+ + VT++S + C + AL GK + GL + N+LIDMY +CGSI
Sbjct: 594 SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQK 653
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
+R +F +P++ +VSW MI+ ++G ++A++LF Q + L+PN +TF +L AC+H
Sbjct: 654 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSH 713
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
+G +E+GW + + + +P ++ Y+CM DLL R G+ E L+F++ MP + +A +
Sbjct: 714 SGLIEEGWKYFKMMKTEYAM--DPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAV 771
Query: 519 WGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
WG+LL AC+IH N ++ EY A LF+LEP S+ YV MAN Y+ GRW+ A IR +MK
Sbjct: 772 WGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKE 831
Query: 579 NQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
V K PG S + K +F D H E ++ L +E Y
Sbjct: 832 RGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 881
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/566 (26%), Positives = 245/566 (43%), Gaps = 102/566 (18%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL-----IYSQM- 75
W + + + +T+ LF M + P++ FP + KAC++L + +Y M
Sbjct: 158 WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYML 217
Query: 76 ---------IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ G I+ F+KC R+D A + F+E+ +DV WN M+ G+ G + L
Sbjct: 218 SIGFEGNSCVKGSILDM-FIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ +M+L G++ D VT N IS Y
Sbjct: 277 KCISDMKLSGVKPDQVT-----------------------------------WNAIISGY 301
Query: 187 AKCDDLKMAELVFC---GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
A+ + A F G+++ VVSW +++AG ++L+ +R M+ G + +
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLF 302
T+ S +S+ L GR +H + I D D+ V N+L+ Y+KC ++ AR F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG-------- 354
I VSW AM++GYA +G +EA+ L M+ G PD++T +++G
Sbjct: 422 GMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGK 481
Query: 355 ---------------------------CGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
CGQ L+LGK Y ++ + V +ALI
Sbjct: 482 AALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALI 541
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
MYS C S+ A +F L + VV W ++I+ CA +G V ALDL ++ ++ N V
Sbjct: 542 SMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTV 601
Query: 448 TFLAVLQACTHTGFLEKGWAIS--IIQ--YDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
T ++ L AC+ L +G I II+ D N +D Y GR G ++++
Sbjct: 602 TMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMY-------GRCGSIQKS 654
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIH 529
MP + D W ++ +H
Sbjct: 655 RRIFDLMP-QRDLVSWNVMISVYGMH 679
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 186/421 (44%), Gaps = 57/421 (13%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPFVKCDRL--------------DCAYKIFDEMAVRD 105
I + C KL +L +H +V + C+ L + A ++FD+M+ R+
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V SW A++ + +G E ++LFY M G++ D + +A K+ + K V+
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ + IG + + V + + + KC + +A F IE + V WN MV+G T +F
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIE--FKDVFMWNIMVSGYTSKGEF 272
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
+L M +G + D T N +
Sbjct: 273 KKALKCISDMKLSGVKPDQVT-----------------------------------WNAI 297
Query: 286 ISMYSKCGDIDSARVLF---DGICD--RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
IS Y++ G + A F G+ D VSWTA+I+G Q G EAL +F M G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACS-GGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ +T+ S +S C L G+ Y L +++V N+L+D Y+KC S+ A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
R F + + +VSW M+AG AL G EA++L ++ + P+ +T+ ++ T
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477
Query: 460 G 460
G
Sbjct: 478 G 478
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G VH+ + G D+ + + L+ +Y + G ++ AR +FD + +R SWTA++ Y
Sbjct: 108 GFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCG 167
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
GD +E ++LF+ M G PD + C + +GK +Y S G + N V
Sbjct: 168 LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCV 227
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+++DM+ KCG + AR F + K V W M++G GEF +AL + +
Sbjct: 228 KGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
+P++VT+ A++ +G E+
Sbjct: 288 KPDQVTWNAIISGYAQSGQFEEA 310
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 266/507 (52%), Gaps = 6/507 (1%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+N ++ F G E+ L LF M AD T ++ L + + V ++
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ G+ AD V ++ I YA C D+ A LVF EE VV WN++VA +
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEES--GVVMWNAIVAAYLKNGDWM 203
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+ + ++ M+ G D T+VS++++ G+ V H G + ++ L+
Sbjct: 204 EVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALM 263
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY+KCG+I AR LFDG+ R V+W+AMISGY Q EAL LF M+ A P+ V
Sbjct: 264 DMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++S++S C GALE GKW +Y L ++ AL+D Y+KCG I DA E F ++
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM 383
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
P K +WT +I G A NG EAL+LF + E + P VTF+ VL AC+H+ +E+G
Sbjct: 384 PVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGR 443
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
D GI P ++HY CM DLLGR G + EA F+++MPI+ +A IW LL +C
Sbjct: 444 RHFDSMARDYGI--KPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSC 501
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+H N+ IGE + L P + YV ++N YA G+W A +R MK ++K PG
Sbjct: 502 AVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPG 561
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTY 613
SL ++G F AED H E Y
Sbjct: 562 CSLIELDGVVFEFFAEDSDHPELREIY 588
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 209/479 (43%), Gaps = 22/479 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
+N +R ++ L LF +M + + T K+C+++ L + + +
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 80 IVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
VK V C + A +FD V WNA++ + + G V
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ +F M VG+ D VT++ + A L K V G+ + + +
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAKC ++ A +F G++ R VV+W++M++G T D+ ++L + M +
Sbjct: 266 YAKCGEIGKARRLFDGMQS--RDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+VS+LS+ AL G+ VHS+ L + L+ Y+KCG ID A F+ +
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM 383
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ +WTA+I G A G EAL LF +M AG P VT + ++ C S +E G+
Sbjct: 384 PVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGR 443
Query: 366 W-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCAL 423
FD+ A G+K V ++D+ + G + +A + +P E V W +++ CA+
Sbjct: 444 RHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAV 503
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ + Q++ L+ P+ +L + K A+ + D+GI P
Sbjct: 504 HRNVGIGEEALKQIISLN--PSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTP 560
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 149/360 (41%), Gaps = 22/360 (6%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S + WN+ + + + + + +F+ M + + + +T + AC ++ D + +
Sbjct: 184 SGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWV 243
Query: 77 HGHI-----VKSP---------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
GH+ ++P + KC + A ++FD M RDV +W+AM+ G+ Q
Sbjct: 244 AGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQC 303
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L LF M+L ++ + VT++ + A L K VHS+ + +
Sbjct: 304 REALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTAL 363
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAKC + A F + ++ +W +++ G + ++L + M G
Sbjct: 364 VDFYAKCGCIDDAVEAFESMP--VKNSWTWTALIKGMATNGRGREALELFSSMREAGIEP 421
Query: 243 DVTTVVSLLSSFVCPEALVQGRL-VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T + +L + + +GR S YG V ++ + + G +D A
Sbjct: 422 TDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQF 481
Query: 302 FDGI-CDRTRVSWTAMISGYA---QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
+ + V W A++S A G +EAL+ ++ + D V + ++ + GQ
Sbjct: 482 IRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHS-GDYVLLSNIYASAGQ 540
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL +S + W++ I ++ + L LF +M+ +EPN++T + ACA L
Sbjct: 277 RLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLG 336
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + +H ++ + + KC +D A + F+ M V++ +W A++
Sbjct: 337 ALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 396
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G A G L LF +MR GI+ VT +G+ A H+
Sbjct: 397 GMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHS 436
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 312/608 (51%), Gaps = 28/608 (4%)
Query: 22 WNSQIREAVNKNEAHKTL-LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I + + LL + + + P+ +T I CA ++ IHG
Sbjct: 215 WNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLA 274
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + KC L+ A F + ++V SWN M+ F+ G +
Sbjct: 275 VKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAF 334
Query: 127 RLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L M++ G ++A+ VT++ + A + L LK +H + V + N +I
Sbjct: 335 NLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFIL 393
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+YAKC L AE VF GI ++ TV SWN+++ G +L+ M Y+G + D
Sbjct: 394 AYAKCGALNSAEKVFHGIGDK--TVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDW 451
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ SLL + ++L G+ +H + + G + D V +L+S Y CG SARVLFD
Sbjct: 452 FTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDR 511
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ D+ VSW AMISGY+Q G E+L LF + G + ++S+ C Q AL LG
Sbjct: 512 MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG 571
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K Y ++ V ++IDMY+K G I ++R++F L +K V SW +I ++
Sbjct: 572 KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--- 481
G EA++L+ ++ ++ P+R T++ +L AC H G +E+G ++Y + ++N
Sbjct: 632 GHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEG-----LKYFKEMQNFNLIE 686
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P+L+HY+C+ D+L R G+L +AL V MP ++D IW +LL +C+ +EIGE VA
Sbjct: 687 PKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKK 746
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +LEP A YV ++N YA G+WDGV +R MMK ++K G S + G+ +F
Sbjct: 747 LLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVV 806
Query: 602 EDRYHAES 609
D +S
Sbjct: 807 GDSLQPKS 814
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 254/532 (47%), Gaps = 35/532 (6%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
QWN+ + + +F + D +P+N TFP + KAC + D+ ++IHG
Sbjct: 112 QWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGM 171
Query: 80 IVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++K V KC +D A K+FD M ++ SWN+M+ F++ GF +
Sbjct: 172 VIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDS 231
Query: 126 LRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L M G+ D VTV+ + + + +H + +G+ +V V N +
Sbjct: 232 FDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVY 291
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG--FRL 242
Y+KC L A++ F ++ + VVSWN+M++ + +++ N + M G +
Sbjct: 292 MYSKCGYLNEAQMSF--VKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKA 349
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T++++L + + L + +H + + F V + N I Y+KCG ++SA +F
Sbjct: 350 NEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVF 408
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
GI D+T SW A+I G+AQ GD +AL L F M +G+ PD T+ S++ C +L+
Sbjct: 409 HGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQ 468
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
GK Y GL+ + V +L+ Y CG AR LF + +K +VSW MI+G +
Sbjct: 469 YGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYS 528
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE-----KGWAISIIQYDDKG 477
NG E+L LF + + ++ + + ++V AC+ L G+ + +Q +D
Sbjct: 529 QNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAF 588
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G +KE+ + K+ A W ++ A IH
Sbjct: 589 VG--------CSIIDMYAKSGCIKESRKVFDGLKDKNVAS-WNAIIVAHGIH 631
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 215/450 (47%), Gaps = 23/450 (5%)
Query: 25 QIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP 84
Q +EA+ LLL Q DIE F++ + +D + ++ ++K
Sbjct: 41 QAKEAIG-------LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYV----LNTRLIKM- 88
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG---IQADF 141
+ C + +FD M +++ WNA++ G+ + G +V+++F M LV Q D
Sbjct: 89 YAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVF--MDLVSDTDFQPDN 146
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T + +A + L + +H I +G+ DV V N + Y KC + A VF
Sbjct: 147 FTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDF 206
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPEAL 260
+ E +VSWNSM+ + DS + M+ G DV TVV++L +
Sbjct: 207 MPE--TNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEV 264
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G +H + G +V V N ++ MYSKCG ++ A++ F ++ VSW MIS +
Sbjct: 265 DIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAF 324
Query: 321 AQKGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
+ +GD++EA L M+ GE + VT+L+++ C L K Y+ +
Sbjct: 325 SLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ- 383
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V + NA I Y+KCG++ A ++F+ + +K V SW +I G A NG+ +AL L Q+
Sbjct: 384 HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMT 443
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+P+ T ++L AC H L+ G I
Sbjct: 444 YSGQQPDWFTISSLLLACAHLKSLQYGKEI 473
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 137/270 (50%), Gaps = 15/270 (5%)
Query: 263 GRLVH---SHGIHYGFDLDVSVINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
GR +H S HY D V+NT LI MY+ CG +R++FD + + + W A++S
Sbjct: 62 GRRLHKFVSDSTHYRNDY---VLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVS 118
Query: 319 GYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
GY + G + +++F + + + PD T S+I CG + LG+ GL
Sbjct: 119 GYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLV 178
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V V NAL+ MY KCG++ +A ++F +PE +VSW +MI + NG ++ DL ++
Sbjct: 179 LDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEM 238
Query: 438 M-ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ E L P+ VT + +L C G ++ G I + + + E+ + M + +
Sbjct: 239 LGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVK---LGLSEEVMVNNAMVYMYSK 295
Query: 497 KGKLKEA-LDFVQSMPIKSDAGIWGTLLCA 525
G L EA + FV++ + W T++ A
Sbjct: 296 CGYLNEAQMSFVKNN--NKNVVSWNTMISA 323
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 153/364 (42%), Gaps = 53/364 (14%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T++ WN+ I + K L L QM + +P+ T + ACA L L Y + IH
Sbjct: 415 TVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIH 474
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G++++ S ++ C + A +FD M +++ SWNAM+ G++Q G
Sbjct: 475 GYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPY 534
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L LF GIQ+ + ++ + A L L K H + + D V + I
Sbjct: 535 ESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSII 594
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAK +K + VF G+++ + V SWN+++ +++ Y M G D
Sbjct: 595 DMYAKSGCIKESRKVFDGLKD--KNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPD 652
Query: 244 VTTVVSLLSSFVCPEA-LVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVL 301
T + +L C A LV+ G+ Y ++ + ++I + Y+
Sbjct: 653 RFTYIGIL--MACGHAGLVE------EGLKYFKEMQNFNLIEPKLEHYA----------- 693
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
+I A+ G LD+ALRL M E D S++ C GAL
Sbjct: 694 -------------CLIDMLARAGRLDDALRLVNEMP---EEADNRIWSSLLRSCRTFGAL 737
Query: 362 ELGK 365
E+G+
Sbjct: 738 EIGE 741
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + WN+ I +++L LFR+ I+ + + + AC++LS L +
Sbjct: 513 KDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGK 572
Query: 75 MIHGHIVKS-----PFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMG 120
HG+++K+ FV C +D + K+FD + ++VASWNA++V G
Sbjct: 573 EAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHG 632
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSVHSFGI 168
+ + L+ M+ VG D T +G+ A HA + L K + +F +
Sbjct: 633 HGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNL 684
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 309/630 (49%), Gaps = 21/630 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ S I WN ++ E ++ + + F+ + ++ I +++T I A DL +
Sbjct: 855 QGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH ++KS F K + A K F D+ SWN M+ +AQ
Sbjct: 915 QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQA---AIHAKHLSLLKSVHSFGIHIGVDADVS 177
+ F ++ G++ D T+ + +A ++ +L VH + I G+ D
Sbjct: 975 LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V I Y+K + AE + G + + SWN+++ G +K +L + M
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDF--DLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G +D T+ + + + C L QG+ + ++ I GF+ D+ V + ++ MY KCGD+ +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A LF I V+WT MISGY + GD D AL ++ M +G PD T ++I
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
ALE GK + V +L+DMY KCGS+ DA +F + + VV W M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
+ G A +G EAL+LF + ++P++VTF+ VL AC+H+G + + + G
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I+ PE++HYSC+ D LGR G+++EA + + SMP K+ A ++ LL AC+ + E +
Sbjct: 1333 IT--PEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKR 1390
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA L L+P ++ YV ++N YA +WD V + R MMK VKK PG S + K
Sbjct: 1391 VADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVH 1450
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSREEA 627
F +DR H ++ L Y ++ L REE
Sbjct: 1451 LFVVDDRSHPQASLIYEKIEDLMKRIREEG 1480
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 232/519 (44%), Gaps = 28/519 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN ++ V + + L F ++ P+ + SD+ ++ H V
Sbjct: 786 WNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQV 843
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
K+ +K D IF +WN L F G + + F + I D
Sbjct: 844 KAYAMKMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
VT++ + AA+ A L L + +H+ I V V N+ ++ Y+K + AE F
Sbjct: 895 VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL---SSFVCPE 258
E ++SWN+M++ + +++ +R ++ +G + D T+ S+L S+ E
Sbjct: 955 SPE--LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
G VH + I G D V LI +YSK G +D A L G D SW A++
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY + +AL F M G D +T+ + I G L+ GK YA G +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ V + ++DMY KCG + +A ELF + V+WTTMI+G NG+ AL ++H +
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR 1192
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHY--SCMADLL 494
++P+ TF +++A + LE+G I ++++ D LDH+ + + D+
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLD-------YSLDHFVGTSLVDMY 1245
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ G +++A + M ++ W +L H +++
Sbjct: 1246 CKCGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVD 1283
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 198/473 (41%), Gaps = 54/473 (11%)
Query: 73 SQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
S+ +HG+ VK F K + A +FD+M RD WN ML + +
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 119 MGFLENVLRLFYNMRLVGIQADFVT---VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F + LR F G DF V+G GV++D
Sbjct: 796 NSFQDEALRFFSAFHRSGFXPDFSNLHCVIG------------------------GVNSD 831
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
VS + K +KM ++ + +WN + + + +++ ++ +
Sbjct: 832 VSNNRKRHAEQVKAYAMKMFPF------DQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ + D T+V +LS+ V + L G +H+ I F V V N+L++MYSK G +
Sbjct: 886 LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+A F + +SW MIS YAQ EA+ F + G PD T+ S++ C
Sbjct: 946 YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Query: 356 --GQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
G G LG YA G+ ++ V ALID+YSK G + +A L + + +
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SW ++ G + + +AL+ F + E+ + + +T ++A L++G I
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYA 1125
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ +N +L S + D+ + G + AL+ + + D W T++
Sbjct: 1126 IK---LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG 1174
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 181/418 (43%), Gaps = 52/418 (12%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
++ ++DL + H IV S + KC L A ++FD+ + RD+
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 108 SWNAMLVGFAQMG--FLENVL---RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
+WN++L +AQ ENVL RLF +R G +T+ L + + + + + ++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH + + IG + D+ V ++ Y K + A L+F + E R V WN M+
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE--RDAVLWNVMLKAYVEN 796
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTT---VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
D++L F+ +GF D + V+ ++S V V ++ +
Sbjct: 797 SFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAM-------- 848
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
K D +F +W ++ + G + A+ F + +
Sbjct: 849 -----------KMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRS 888
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
D VT++ ++S + L+LG+ V V N+L++MYSK G + A
Sbjct: 889 TIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+ F PE ++SW TMI+ A N +EA+ F L+ L+P++ T +VL+AC+
Sbjct: 949 EKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS 1006
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 136/325 (41%), Gaps = 32/325 (9%)
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
++AI L L K H+ + G D + N I+ Y+KC L A VF +R
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR--D 676
Query: 209 VVSWNSMVAG-CTYGDK-FDDSLNFYRH---MMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+V+WNS++A + D +++ L +R + GF + T+ LL + +
Sbjct: 677 LVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
VH + + GF+LD+ V L+++Y K G + AR+LFD + +R V W M+ Y +
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
DEALR F A +G PD + +I G N S K +
Sbjct: 797 SFQDEALRFFSAFHRSGFXPDFSNLHCVIGGV-------------NSDVSNNRKRHAEQV 843
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
A A ++F + +W + G+ V A+D F L+ +
Sbjct: 844 KAY------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
+ VT + +L A L+ G I
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQI 916
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 23/177 (12%)
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+LGK + G + + N LI MYSKCGS+ AR++F ++ +V+W +++A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 421 CALNGE-----FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE-----KGWAISI 470
A + +E LF L E R+T +L+ C +GF++ G+A+ I
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 471 IQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
ELD + + ++ + G + +A MP + DA +W +L A
Sbjct: 747 ----------GFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|115484979|ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|62734753|gb|AAX96862.1| Similar to selenium-binding protein [Oryza sativa Japonica Group]
gi|77549625|gb|ABA92422.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|125597201|gb|EAZ36981.1| hypothetical protein OsJ_21321 [Oryza sativa Japonica Group]
Length = 582
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 185/504 (36%), Positives = 270/504 (53%), Gaps = 10/504 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQ-MGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
L A ++FD RD WN +L A + L L+ MR G+ D T +
Sbjct: 72 LAYARRVFDAAPSRDAYMWNTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLP 131
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A A+ L ++ H + + D V + IS Y++ +++ AE VF ++ RTV
Sbjct: 132 ACAAARAPRLGRAAHGDAVRFALARDGFVSSALISMYSQEGEVRDAERVFAERDD-ARTV 190
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSW +MVAG F +++ + M+ G + T++S L E L G +VH
Sbjct: 191 VSWTAMVAGYAQNCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGF 250
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ GFD +V ++N LI+MY +CG ARVLF+G+ RT VSW M++ Y Q GD +A
Sbjct: 251 VVKLGFDANVPMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQA 310
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
++ F M D VT++S++S C +SGAL GKW A S GL + + N L+DM
Sbjct: 311 IKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNVLVDM 370
Query: 390 YSKCGSIGDARELFYA--LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
Y+KCG I A+E+F++ L VVSW+ MI A +GE EAL LF + +RPN
Sbjct: 371 YAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSF 430
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPELDHYSCMADLLGRKGKLKEALD 505
TF AVL AC H+G +++G + ++ Y +P L+HY+CM D+LGR G+L EA
Sbjct: 431 TFTAVLMACCHSGLVDEG----LKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYG 486
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
++ MPI+ D +WG L C++H +E+ EYVA LF + YV MAN Y G
Sbjct: 487 IIRGMPIRPDKCVWGAFLGGCRLHGMVELAEYVAKELFDSGSNDVTFYVLMANMYFEAGM 546
Query: 566 WDGVANIRTMMKRNQVKKFPGQSL 589
+ IR +MK ++KK G SL
Sbjct: 547 LEDAERIRGVMKEMELKKTAGHSL 570
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 223/458 (48%), Gaps = 36/458 (7%)
Query: 22 WNSQIR-EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ +R A ++ A L L+ +M+ + P++ T+P + ACA + HG
Sbjct: 90 WNTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDA 149
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEM-AVRDVASWNAMLVGFAQMGFLENV 125
V+ S + + + A ++F E R V SW AM+ G+AQ F
Sbjct: 150 VRFALARDGFVSSALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEA 209
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF +M G+ + +T++ + L + + VH F + +G DA+V + N I+
Sbjct: 210 VTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITM 269
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y +C +A ++F G+ RT+VSWN+MVA ++ F+R M+ D
Sbjct: 270 YGRCGSAPVARVLFNGMSS--RTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCV 327
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF--D 303
T+VS+LS+ AL G+ VH +G D D + N L+ MY+KCG+I A+ +F
Sbjct: 328 TLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSH 387
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
G+ + VSW+AMI+ YA G+ +EAL+LF M G P+ T +++ C SG ++
Sbjct: 388 GLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDE 447
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIA 419
G K F++ A + + ++DM + G + +A + + P+K V W +
Sbjct: 448 GLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCV--WGAFLG 505
Query: 420 GCALNG--EFVE--ALDLFHQLMELDLRPNRVTFLAVL 453
GC L+G E E A +LF D N VTF ++
Sbjct: 506 GCRLHGMVELAEYVAKELF------DSGSNDVTFYVLM 537
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 179/375 (47%), Gaps = 11/375 (2%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ + +G+ A+ + + I++ A L A VF R WN+++ +
Sbjct: 44 IHARAVVLGISANPAFATSLITAVAPAC-LAYARRVFDAAPSR--DAYMWNTLLRAHAHS 100
Query: 223 DKF-DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
D+L Y M G D T +L + A GR H + + D V
Sbjct: 101 RAHARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALARDGFV 160
Query: 282 INTLISMYSKCGDI-DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
+ LISMYS+ G++ D+ RV + RT VSWTAM++GYAQ EA+ LF M AAG
Sbjct: 161 SSALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEAVTLFSDMVAAG 220
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
LP+ +T++S + L +G+ + G NV + NALI MY +CGS AR
Sbjct: 221 VLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITMYGRCGSAPVAR 280
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
LF + + +VSW TM+A +G+ V+A+ F +++ + + VT ++VL AC +G
Sbjct: 281 VLFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSG 340
Query: 461 FLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI- 518
L G W + + G+ + + + + D+ + G++ A + S ++ + +
Sbjct: 341 ALGTGKWVHELAR--SHGLDTDARIG--NVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVS 396
Query: 519 WGTLLCACKIHLNIE 533
W ++ A H E
Sbjct: 397 WSAMINAYANHGEAE 411
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 18/321 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ T+ W + + + + LF M + PN +T L +M
Sbjct: 187 ARTVVSWTAMVAGYAQNCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEM 246
Query: 76 IHGHIVK------SPFV--------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG +VK P V +C A +F+ M+ R + SWN M+ + Q G
Sbjct: 247 VHGFVVKLGFDANVPMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGD 306
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
++ F M + D VT++ + A + L K VH G+D D + N
Sbjct: 307 GVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNV 366
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YAKC ++ A+ VF R +VVSW++M+ + +++L + M G R
Sbjct: 367 LVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVR 426
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN--TLISMYSKCGDIDSAR 299
+ T ++L + C LV L H + I + + ++ + ++ M + G + A
Sbjct: 427 PNSFTFTAVLMA-CCHSGLVDEGLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAY 485
Query: 300 VLFDGICDRT-RVSWTAMISG 319
+ G+ R + W A + G
Sbjct: 486 GIIRGMPIRPDKCVWGAFLGG 506
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R ++ W++ I N EA + L LF M+ + PN+ TF + AC S L+
Sbjct: 390 RGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCH-SGLVDEG 448
Query: 75 MIHGHIVKSPFV----------------KCDRLDCAYKIFDEMAVR-DVASWNAMLVGFA 117
+ H + + + + + RL AY I M +R D W A L G
Sbjct: 449 LKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCVWGAFLGGCR 508
Query: 118 QMGFLE 123
G +E
Sbjct: 509 LHGMVE 514
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 305/600 (50%), Gaps = 25/600 (4%)
Query: 22 WNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I +VN + F + ++ I+PN ++ + A L D ++ IH +
Sbjct: 79 WNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYS 138
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + KC + +++F+E ++ SWN+++ G A G + L
Sbjct: 139 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 198
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M G Q + VT+ + + + K +H F + +G + D+ + N+ I Y
Sbjct: 199 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMY 258
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK A +F ++ R +VSWN+M+A +++ F M G + T
Sbjct: 259 AKSGHSTEASTIFHNLDRR--NIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVT 316
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
++L + L G+ +H+ G+ G D+ V N+LI MY+KCG + SAR +F+
Sbjct: 317 FTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TS 375
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ VS+ +I GY++ D ++L LF M G+ PD+V+ + +IS C AL+ GK
Sbjct: 376 RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKE 435
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
A L ++ V N+L+D Y+KCG I A LF + K V SW TMI G + GE
Sbjct: 436 VHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGE 495
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS--YNPEL 484
A+ +F + + ++ + V+++AVL AC+H G +E+GW QY + ++ P
Sbjct: 496 LETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGW-----QYFSEMLAQRLEPTE 550
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
HY+CM DLLGR G ++EA +Q +PI DA IWG LL AC+I+ N+E+G A LF+
Sbjct: 551 MHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFE 610
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P Y+ ++N YA GRWD IR +MK KK PG S I + F AE+R
Sbjct: 611 LKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 670
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 241/498 (48%), Gaps = 30/498 (6%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDR 90
M + ++ ++ TFPF+ K C+ D+ +HG + K F C
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQ 149
L+ A ++FDEM RDV SWN ++ + G ++ M L I+ + V+V+ L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ + + + +H + + +G+D+ V+ CN + +Y KC +K VF E +
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVE--KNE 178
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWNS++ G + D+LN +R M+ G + + T+ S+L V E G+ +H
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ G + D+ + N+LI MY+K G A +F + R VSW AMI+ YA EA
Sbjct: 239 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+R M+ GE P+ VT +++ C + G L GK GL ++ V N+LIDM
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDM 358
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y+KCG + AR +F K VS+ +I G + + +++L+LF ++ L +P+ V+F
Sbjct: 359 YAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISY----NPELDHYSCMADLLGRKGKLKEALD 505
+ V+ AC + L++G + + + S+ N LD Y+ + G++ A
Sbjct: 418 VGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYT-------KCGRIDIACR 470
Query: 506 FVQSMPIKSDAGIWGTLL 523
+ K D W T++
Sbjct: 471 LFNQILFK-DVASWNTMI 487
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 181/539 (33%), Positives = 287/539 (53%), Gaps = 8/539 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
AYK+FD+M R++ +W M+ FAQ+G + + LF +M L G D T + A
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC---DDLKMAELVFCGIEERLRTVV 210
L+L K +HS I +G+ DV V + + YAKC + + VF + E V+
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVM 121
Query: 211 SWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
SW +++ + D +++ + M+ R + + S+L + G V+S+
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ G V N+LISMY++ G ++ AR FD + ++ VS+ A++ GYA+ +EA
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
LF + G T S++SG GA+ G+ GG K N +CNALI M
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
YS+CG+I A ++F + ++ V+SWT+MI G A +G AL++FH+++E +PN +T+
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+AVL AC+H G + +G Y + GI P ++HY+CM DLLGR G L EA++F+ S
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIV--PRMEHYACMVDLLGRSGLLVEAMEFINS 419
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
MP+ +DA +W TLL AC++H N E+G + A + + EP A Y+ ++N +A G+W V
Sbjct: 420 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 479
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
IR MK + K G S + + F + H ++ Y LD LA +E Y
Sbjct: 480 VKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 538
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 201/424 (47%), Gaps = 22/424 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I A + LF M+ + P+ T+ + AC +L L + +H ++
Sbjct: 19 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 78
Query: 82 K--------------SPFVKC---DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ + KC +D + K+F++M +V SW A++ +AQ G +
Sbjct: 79 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDK 138
Query: 125 -VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M I+ + + + +A + + V+S+ + +G+ + V N+ I
Sbjct: 139 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 198
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
S YA+ ++ A F + E + +VS+N++V G K +++ + + G +
Sbjct: 199 SMYARSGRMEDARKAFDILFE--KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 256
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T SLLS A+ +G +H + G+ + + N LISMYS+CG+I++A +F+
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 316
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ DR +SWT+MI+G+A+ G AL +F M G P+ +T ++++S C G +
Sbjct: 317 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 376
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
G K F++ G+ + ++D+ + G + +A E ++P + W T++ C
Sbjct: 377 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 436
Query: 422 ALNG 425
++G
Sbjct: 437 RVHG 440
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 17/251 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+ W + I E K + LF +M I PN+ +F + KAC LSD + +
Sbjct: 119 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 178
Query: 77 HGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
+ + VK S + + R++ A K FD + +++ S+NA++ G+A+
Sbjct: 179 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 238
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
E LF + GI T L A + + +H + G ++ +CN
Sbjct: 239 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 298
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
IS Y++C +++ A VF +E+ R V+SW SM+ G +L + M+ G +
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMED--RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 356
Query: 243 DVTTVVSLLSS 253
+ T V++LS+
Sbjct: 357 NEITYVAVLSA 367
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 181/539 (33%), Positives = 287/539 (53%), Gaps = 8/539 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
AYK+FD+M R++ +W M+ FAQ+G + + LF +M L G D T + A
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC---DDLKMAELVFCGIEERLRTVV 210
L+L K +HS I +G+ DV V + + YAKC + + VF + E V+
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVM 126
Query: 211 SWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
SW +++ + D +++ + M+ R + + S+L + G V+S+
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ G V N+LISMY++ G ++ AR FD + ++ VS+ A++ GYA+ +EA
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
LF + G T S++SG GA+ G+ GG K N +CNALI M
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
YS+CG+I A ++F + ++ V+SWT+MI G A +G AL++FH+++E +PN +T+
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+AVL AC+H G + +G Y + GI P ++HY+CM DLLGR G L EA++F+ S
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIV--PRMEHYACMVDLLGRSGLLVEAMEFINS 424
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
MP+ +DA +W TLL AC++H N E+G + A + + EP A Y+ ++N +A G+W V
Sbjct: 425 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 484
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
IR MK + K G S + + F + H ++ Y LD LA +E Y
Sbjct: 485 VKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 543
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 201/424 (47%), Gaps = 22/424 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I A + LF M+ + P+ T+ + AC +L L + +H ++
Sbjct: 24 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 83
Query: 82 K--------------SPFVKC---DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ + KC +D + K+F++M +V SW A++ +AQ G +
Sbjct: 84 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDK 143
Query: 125 -VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M I+ + + + +A + + V+S+ + +G+ + V N+ I
Sbjct: 144 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 203
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
S YA+ ++ A F + E + +VS+N++V G K +++ + + G +
Sbjct: 204 SMYARSGRMEDARKAFDILFE--KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 261
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T SLLS A+ +G +H + G+ + + N LISMYS+CG+I++A +F+
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 321
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ DR +SWT+MI+G+A+ G AL +F M G P+ +T ++++S C G +
Sbjct: 322 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 381
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
G K F++ G+ + ++D+ + G + +A E ++P + W T++ C
Sbjct: 382 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 441
Query: 422 ALNG 425
++G
Sbjct: 442 RVHG 445
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 17/251 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+ W + I E K + LF +M I PN+ +F + KAC LSD + +
Sbjct: 124 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 183
Query: 77 HGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
+ + VK S + + R++ A K FD + +++ S+NA++ G+A+
Sbjct: 184 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 243
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
E LF + GI T L A + + +H + G ++ +CN
Sbjct: 244 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 303
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
IS Y++C +++ A VF +E+ R V+SW SM+ G +L + M+ G +
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMED--RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 361
Query: 243 DVTTVVSLLSS 253
+ T V++LS+
Sbjct: 362 NEITYVAVLSA 372
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 303/588 (51%), Gaps = 30/588 (5%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMA 102
FP + + C + ++MIHGHIVK+ F KC ++ A+K+FD +
Sbjct: 62 FPLL-QECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 120
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
R+V +W +L G+ Q L+LF M G T+ + A + + K
Sbjct: 121 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 180
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH++ I +D D S+ N+ S Y+K L+ A F I+E+ V+SW S+++ C
Sbjct: 181 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEK--DVISWTSVISSCCDN 238
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ SL+F+ M+ +G + + T+ S+LS+ L G +HS I G+ + +
Sbjct: 239 GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIK 298
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE-----------ALR 331
N+++ +Y KCG + A+ LF+G+ V+W AMI+G+A+ DL E AL
Sbjct: 299 NSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALA 358
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+F + +G PDL T S++S C ALE G+ G+ +V+V AL+ MY+
Sbjct: 359 MFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYN 418
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCGSI A + F +P + ++SWT+MI G A +G +AL LF + + ++PN+VTF+
Sbjct: 419 KCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVG 478
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
VL AC+H G ++ A+ + K + P +DH++C+ D+ R G+++EA D V M
Sbjct: 479 VLSACSHAGLADE--ALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN 536
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
+ + IW L+ C+ H ++G Y A L KL+P YV + N + GRW V+
Sbjct: 537 FEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSK 596
Query: 572 IRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+R +MK +V K S I K +F D+ H +S Y +L+ +
Sbjct: 597 VRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETV 644
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 228/485 (47%), Gaps = 47/485 (9%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
PR N +N W + + V + L LF +M + P+N T + AC+ L
Sbjct: 120 PRRN-------VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172
Query: 68 SDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
+ + + +H +++K S + K RL+ A K F + +DV SW +++
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G L F +M G++ + T+ + A L L +HS I +G
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 292
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDD----- 227
+ + + N+ + Y KC L A+ +F G+E +V+WN+M+AG D +D
Sbjct: 293 SSILIKNSIMYLYLKCGWLIEAQKLFEGMET--LNLVTWNAMIAGHAKMMDLAEDDVAAH 350
Query: 228 -----SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVS 280
+L ++ + +G + D+ T S+LS VC AL QG +H I G DV
Sbjct: 351 KSGSTALAMFQKLYRSGMKPDLFTFSSVLS--VCSNLVALEQGEQIHGQIIKSGVLADVV 408
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V L+SMY+KCG ID A F + RT +SWT+MI+G+A+ G +AL+LF M G
Sbjct: 409 VGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG 468
Query: 341 ELPDLVTVLSMISGCGQSG-ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ VT + ++S C +G A E +F+ +K + LIDMY + G + +A
Sbjct: 469 IKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA 528
Query: 400 RELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV-TFLAVLQA 455
++ + + P + + W+ +IAGC +G+ L + L L+P V T++++L
Sbjct: 529 FDVVHKMNFEPNETI--WSMLIAGCRSHGK--SDLGFYAAEQLLKLKPKDVETYVSLLNM 584
Query: 456 CTHTG 460
G
Sbjct: 585 HISAG 589
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 113/218 (51%)
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G R++ + LL + + R++H H + GF D+ V+ L+++YSKCG ++SA
Sbjct: 53 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+FD + R +WT +++GY Q AL+LF M AG P T+ +++ C
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
++E GK Y + + + N+L YSK + A + F + EK V+SWT++I
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+ C NG+ +L F ++ ++PN T +VL AC
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSAC 270
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 157/392 (40%), Gaps = 51/392 (13%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
+I + + W S I + +A ++L F M + ++PN T + AC + L
Sbjct: 218 KIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD 277
Query: 72 YSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
IH +K ++KC L A K+F+ M ++ +WNAM+ G A
Sbjct: 278 LGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHA 337
Query: 118 QMGFL-----------ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+M L L +F + G++ D T + + L + +H
Sbjct: 338 KMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQ 397
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I GV ADV V +S Y KC + A F +E RT++SW SM+ G
Sbjct: 398 IIKSGVLADVVVGTALVSMYNKCGSIDKASKAF--LEMPSRTMISWTSMITGFARHGLSQ 455
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSF----VCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+L + M G + + T V +LS+ + EAL L+ Y +
Sbjct: 456 QALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQK---QYNIKPVMDHF 512
Query: 283 NTLISMYSKCGDIDSARVLFDGI----CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
LI MY + G ++ A FD + + W+ +I+G G D F+A E
Sbjct: 513 ACLIDMYLRLGRVEEA---FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLG---FYAAEQ 566
Query: 339 AGEL--PDLVTVLSMISGCGQSGALELGKWFD 368
+L D+ T +S++ + + G+W D
Sbjct: 567 LLKLKPKDVETYVSLL-----NMHISAGRWKD 593
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 315/614 (51%), Gaps = 19/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W + I VN +++++ L+LF M + + KACA ++ + +++HG
Sbjct: 91 WTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFS 150
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VKS ++K +++ ++F++M R+V SW A++ G G+ L
Sbjct: 151 VKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGL 210
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M + D T +A+ + L K++H+ I G D V NT + Y
Sbjct: 211 LYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMY 270
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC +F + R+ VVSW ++++ + + ++ ++ M + + T
Sbjct: 271 NKCGKPDYVMRLFEKM--RMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYT 328
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+++SS A G +H H + G +SV N++I++YSKCG + SA ++F GI
Sbjct: 329 FAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGIT 388
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW+ +IS Y+Q G EA M G P+ + S++S CG LE GK
Sbjct: 389 RKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ 448
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G+ MV +A+I MYSKCGS+ +A ++F + ++SWT MI G A +G
Sbjct: 449 VHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGY 508
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EA++LF ++ + L+P+ V F+ VL AC H G ++ G+ ++ + IS P +H
Sbjct: 509 SQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRIS--PSKEH 566
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y C+ DLL R G+L EA ++SMP +D +W TLL AC++H +++ G + A L +L+
Sbjct: 567 YGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLD 626
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+SA ++ +AN YA GRW A+IR +MK V K G S ++N + F A D+ H
Sbjct: 627 PNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAH 686
Query: 607 AESELTYPVLDCLA 620
+SE VL L+
Sbjct: 687 PQSEHITTVLKLLS 700
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 178/384 (46%), Gaps = 7/384 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGIQADFVT 143
VK +L A +FD+M RD SW ++ G+ L LF NM + G Q D
Sbjct: 67 LVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFM 126
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ +A ++ + +H F + G+ V V + I Y K ++ C +
Sbjct: 127 ISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQG----CRVF 182
Query: 204 ERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
E++ R VVSW +++AG + + L ++ M + D T L + L
Sbjct: 183 EKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLH 242
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G+ +H+ I GFD VINTL +MY+KCG D LF+ + VSWT +IS Y
Sbjct: 243 HGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYV 302
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q G+ + A+ F M + P+ T ++IS C A + G+ + GL + +
Sbjct: 303 QMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS 362
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N++I +YSKCG + A +F+ + K ++SW+T+I+ + G EA D +
Sbjct: 363 VANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREG 422
Query: 442 LRPNRVTFLAVLQACTHTGFLEKG 465
+PN +VL C LE+G
Sbjct: 423 PKPNEFALSSVLSVCGSMALLEQG 446
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 117/259 (45%), Gaps = 16/259 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL R + W + I V E + F++M+++ + PN TF + +CA L+
Sbjct: 281 RLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLA 340
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ + IHGH+++ + + KC L A +F + +D+ SW+ ++
Sbjct: 341 AAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIIS 400
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
++Q G+ + MR G + + + + L K VH+ + IG+D
Sbjct: 401 VYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDH 460
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V + IS Y+KC ++ A +F G+ ++ ++SW +M+ G +++N +
Sbjct: 461 EAMVHSAIISMYSKCGSVQEASKIFNGM--KINDIISWTAMINGYAEHGYSQEAINLFEK 518
Query: 235 MMYNGFRLDVTTVVSLLSS 253
+ G + D + +L++
Sbjct: 519 ISSVGLKPDYVMFIGVLTA 537
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 125/298 (41%), Gaps = 27/298 (9%)
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-AG 340
+N+ + K G + AR +FD + R +SWT +I+GY D EAL LF M G
Sbjct: 60 LNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPG 119
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D + + C + G+ ++ GL +V V +ALIDMY K G I
Sbjct: 120 PQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGC 179
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F + + VVSWT +IAG G +E L F ++ + + TF L+A +
Sbjct: 180 RVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSS 239
Query: 461 FLEKGWAI---SIIQ-YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
L G AI +I Q +D+ N +A + + GK + + M + D
Sbjct: 240 LLHHGKAIHTQTIKQGFDESSFVIN-------TLATMYNKCGKPDYVMRLFEKMRM-PDV 291
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
W TL I +++GE E H+ + M Y ++ A I +
Sbjct: 292 VSWTTL-----ISTYVQMGE---------EEHAVEAFKRMRKSYVSPNKYTFAAVISS 335
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 312/641 (48%), Gaps = 78/641 (12%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIF 98
++ T P + KAC +L HG I + F +C L+ A IF
Sbjct: 9 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68
Query: 99 DEMAVR---DVASWNAMLVGFAQMGFLENVLRLFYNMRLV------GIQADFVTVMGLTQ 149
DE+ R DV SWN+++ + L LF M L+ ++D ++++ +
Sbjct: 69 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 128
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A K + K VH I G DV V N I +YAKC ++ A VF +E + V
Sbjct: 129 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME--FKDV 186
Query: 210 VSWNSMVAGCTYGDKFD-----------------------------------DSLNFYRH 234
VSWN+MVAG + F ++LN +R
Sbjct: 187 VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQ 246
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY----------GFDLDVSVINT 284
M+++G + T++S+LS+ A QG +H++ + G D D+ V N
Sbjct: 247 MIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 306
Query: 285 LISMYSKCGDIDSARVLFDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAG 340
LI MYSKC +AR +FD I +R V+WT MI G+AQ GD ++AL+LF M E G
Sbjct: 307 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 366
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGD 398
P+ T+ ++ C A+ +GK Y D+ V N LI+MYSKCG +
Sbjct: 367 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDT 426
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
AR +F ++ +K +SWT+M+ G ++G EALD+F ++ + P+ +TFL VL AC+H
Sbjct: 427 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 486
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
G +++G + D G++ P +HY+ DLL R G+L +A V+ MP++ A +
Sbjct: 487 CGMVDQGLSYFDSMSADYGLT--PRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVV 544
Query: 519 WGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
W LL AC++H N+E+ E+ L ++ + Y ++N YA GRW VA IR +MK+
Sbjct: 545 WVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKK 604
Query: 579 NQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+ +KK PG S T +F DR H S Y +L+ L
Sbjct: 605 SGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESL 645
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 224/493 (45%), Gaps = 73/493 (14%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQM------KQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
WNS + V + A L LF +M K + + ++ I AC L + ++
Sbjct: 81 SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTK 140
Query: 75 MIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+HG+ +++ + KC ++ A K+F+ M +DV SWNAM+ G++Q G
Sbjct: 141 EVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSG 200
Query: 121 FLENVLRLFYNMRLVGIQADFVT----VMGLTQAAIHAKHL------------------- 157
+ LF NMR I D VT + G +Q + L
Sbjct: 201 NFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTII 260
Query: 158 SLLKSVHSFG-------IHI---------------GVDADVSVCNTWISSYAKCDDLKMA 195
S+L + S G IH G D D+ V N I Y+KC K A
Sbjct: 261 SVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAA 320
Query: 196 ELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYN--GFRLDVTTVVSLLS 252
+F I R VV+W M+ G YGD +D+L + M+ G + T+ +L
Sbjct: 321 RSIFDDIPLEERNVVTWTVMIGGHAQYGDS-NDALKLFVEMISEPYGVAPNAYTISCILM 379
Query: 253 SFVCPEALVQGRLVHSHGI-HYGFDLDVS-VINTLISMYSKCGDIDSARVLFDGICDRTR 310
+ A+ G+ +H++ + H+ +D V N LI+MYSKCGD+D+AR +FD + ++
Sbjct: 380 ACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSA 439
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDN 369
+SWT+M++GY G EAL +F M AG +PD +T L ++ C G ++ G +FD+
Sbjct: 440 ISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDS 499
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFV 428
+ GL ID+ ++ G + A + +P E V W +++ C ++
Sbjct: 500 MSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVE 559
Query: 429 EALDLFHQLMELD 441
A ++L+E++
Sbjct: 560 LAEHALNKLVEMN 572
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 9/235 (3%)
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G RLD T+ +L + + G H GF+ +V + N L++MYS+CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 295 IDSARVLFDGICDR---TRVSWTAMISGYAQKGDLDEALRLFFAM------EAAGELPDL 345
++ A ++FD I R +SW +++S + + + AL LF M + E D+
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+++++++ CG A+ K A G +V V NALID Y+KCG + +A ++F
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+ K VVSW M+AG + +G F A +LF + + ++ + VT+ AV+ + G
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRG 235
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/636 (30%), Positives = 319/636 (50%), Gaps = 31/636 (4%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W + I + + LF M + P+ +ACA+L DL + +H
Sbjct: 113 SWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQA 172
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+KS + K + + +F+ + +D+ SW +++ G AQ G + L
Sbjct: 173 IKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDAL 232
Query: 127 RLFYNMRLVGI----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+F M G+ + F +V I++ L + +H + +D + +
Sbjct: 233 HIFREMIAEGMHHPNEFHFGSVFRACSVVINS--LEYGEQIHGLCVKYKLDRNSYAGCSL 290
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YA+C+ L A VF IE +VSWNS++ + +++ + M Y+ +
Sbjct: 291 GDMYARCNKLDSAMKVFYRIESP--DLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKP 348
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D TV++LL + V +AL QGR +HS+ + G DV V N+LISMY++C D SA +F
Sbjct: 349 DGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVF 408
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DR V+W ++++ Q +++ +LF + ++ D +++ +++S + G E
Sbjct: 409 HETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFE 468
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGC 421
+ K YA GL + ++ NALID Y+KCGS+ DA +LF + + V SW+++I G
Sbjct: 469 MAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGY 528
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A G EALDLF ++ L ++PN VTF+ VL AC+ G +++G I + GI
Sbjct: 529 AQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIV-- 586
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +H SC+ DLL R G+L EA FV MP + D +W TLL A + H ++E+G+ A
Sbjct: 587 PTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEG 646
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ ++P +A YV + N YA G W+ A ++ M+ + V+K PG+S + G+ F
Sbjct: 647 VLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIV 706
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPE 637
EDR H ES+ Y +LD + + Y IPE
Sbjct: 707 EDRSHPESDEMYTMLDLIGFEMVKAGY------IPE 736
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 212/490 (43%), Gaps = 44/490 (8%)
Query: 64 CAKLSDLIYSQMIHGHIVKSP-------------------FVKCDRLDCAYKIFDEMAVR 104
C++L +++H H++ S + +C D A +FD M R
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+ SW A++ AQ + + LF +M +G D + +A L L + VH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR--TVVSWNSMVAGCTYG 222
+ I + V N ++ Y+K + +F ER+R + SW S++AG
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALF----ERIRDKDLFSWGSIIAGLAQQ 225
Query: 223 DKFDDSLNFYRHMMYNGF----RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ D+L+ +R M+ G +V S V +L G +H + Y D +
Sbjct: 226 GREMDALHIFREMIAEGMHHPNEFHFGSVFRACS--VVINSLEYGEQIHGLCVKYKLDRN 283
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+L MY++C +DSA +F I VSW ++I+ ++ G L EA+ LF M
Sbjct: 284 SYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRY 343
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+ PD +TV++++ C AL G+ +Y GL +VMVCN+LI MY++C
Sbjct: 344 SSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPS 403
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A ++F+ ++ VV+W +++ C + + LF L +R++ VL A
Sbjct: 404 AMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAE 463
Query: 459 TGFLE-----KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
G+ E +A + D +S N +D Y+ + G L +A + M
Sbjct: 464 LGYFEMAKQVHAYAFKVGLVSDAILS-NALIDTYA-------KCGSLDDANKLFEIMGTG 515
Query: 514 SDAGIWGTLL 523
D W +L+
Sbjct: 516 RDVFSWSSLI 525
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 23/277 (8%)
Query: 262 QGRLVHSH------GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
QGRLVH H G Y + + N LI+MY +C DSAR++FDG+ DR VSW A
Sbjct: 58 QGRLVHRHLLASSAGAAY-LARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAA 116
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+I+ +AQ +A+ LF +M G PD + S + C + G L LG+ A
Sbjct: 117 VIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSD 176
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+++V NAL+ MYSK GS+GD LF + +K + SW ++IAG A G ++AL +F
Sbjct: 177 NGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFR 236
Query: 436 QLMELDL-RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK--GISYNPELDHYS---- 488
+++ + PN F +V +AC+ I+ ++Y ++ G+ +LD S
Sbjct: 237 EMIAEGMHHPNEFHFGSVFRACS--------VVINSLEYGEQIHGLCVKYKLDRNSYAGC 288
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ D+ R KL A+ + D W +L+ A
Sbjct: 289 SLGDMYARCNKLDSAMKVFYRIE-SPDLVSWNSLINA 324
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 155/375 (41%), Gaps = 51/375 (13%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + WNS I + ++LF +M+ + ++P+ +T + AC L +
Sbjct: 312 SPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRS 371
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++VK S + +C A +F E RDV +WN++L Q
Sbjct: 372 IHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRH 431
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+E+V +LF + D +++ + A+ + + K VH++ +G+ +D + N
Sbjct: 432 MEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNA 491
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I +YAKC L A +F I R V SW+S++ G ++L+ + M G +
Sbjct: 492 LIDTYAKCGSLDDANKLF-EIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVK 550
Query: 242 LDVTTVVSLL---------------SSFVCPEALV----------------QGRLVHSHG 270
+ T V +L S + PE + GRL +
Sbjct: 551 PNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAK 610
Query: 271 I--HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD---RTRVSWTAMISGYAQKGD 325
F+ D+ + NTL++ D++ + +G+ + ++ + + YA G+
Sbjct: 611 FVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGN 670
Query: 326 LDEALRLFFAMEAAG 340
+E RL M ++G
Sbjct: 671 WNEFARLKKDMRSSG 685
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/657 (29%), Positives = 316/657 (48%), Gaps = 91/657 (13%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
++T + + E V NE ++ L M+ + +P + +++Q+
Sbjct: 19 TATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTD--------------SFLHNQL 64
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV---------- 125
+H + K +L A +FD+M RD SWNA+L +A+ G ++N+
Sbjct: 65 LH------LYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 126 ---------------------LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
L LF M+ G + T++ + A+ L K +H
Sbjct: 119 DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIH 178
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
I +V + N YAKC +++ A +F + ++ +VSWN M++G +
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKK--NLVSWNLMISGYAKNGQ 236
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+ + M +G D T ++T
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVT-----------------------------------MST 261
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+I+ Y +CG +D AR +F ++ V WTAM+ GYA+ G ++AL LF M PD
Sbjct: 262 IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPD 321
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ S++S C + +L G+ + GL +N++V +ALIDMYSKCG I DAR +F
Sbjct: 322 SYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFN 381
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+P + VVSW MI GCA NG +AL+LF +++ +P+ VTF+ +L AC H ++E+
Sbjct: 382 LMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQ 441
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G + G++ P LDHY+CM +LLGR G++++A+ +++M D IW TLL
Sbjct: 442 GQEYFDSISNQHGMT--PTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
C +I E A LF+L+P A PY+ ++N YA GRW VA++R +MK VKKF
Sbjct: 500 ICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKF 559
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHEAG 641
G S I+ + FT+EDR H ESE Y L+ L +EE ++ + + H+ G
Sbjct: 560 AGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVL-HDVG 615
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
++ I W + + LLLF +M IEP++ T + +CAKL+ L +
Sbjct: 282 FKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG 341
Query: 74 QMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
Q +HG +V S + KC +D A +F+ M R+V SWNAM+VG AQ
Sbjct: 342 QAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQN 401
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
G ++ L LF NM + D VT +G+ A +H
Sbjct: 402 GHDKDALELFENMLQQKFKPDNVTFIGILSACLH 435
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/548 (34%), Positives = 278/548 (50%), Gaps = 43/548 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A K+FDE+ R+V N M+ + GF +++F M ++ D T + +A
Sbjct: 94 ARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSC 153
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ ++ + K +H +G+ + + V N +S Y KC L A LV E R VVSWN
Sbjct: 154 SGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD--EMSRRDVVSWN 211
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
S+VAG +FDD+L R M D T+ SLL +
Sbjct: 212 SLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-------------------- 251
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
VS T MY K +F + ++ VSW MI Y + EA+ L+
Sbjct: 252 -----VSNTTTENVMYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 298
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
MEA G PD V++ S++ CG + AL LGK Y L N+++ NALIDMY+KC
Sbjct: 299 SGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 358
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR++F + + VVSWT MI+ +G +A+ LF ++ + L P+ + F+ L
Sbjct: 359 GCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTL 418
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G LE+G + + D I+ P L+H +CM DLLGR GK+KEA F+Q MP++
Sbjct: 419 AACSHAGLLEEGRSCFKLMTDHYKIT--PRLEHLACMVDLLGRAGKVKEAYKFIQEMPME 476
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+ +WG LL AC++H N +IG A LF+L P + YV ++N YA GRW+ V NIR
Sbjct: 477 PNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIR 536
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
+MK +KK PG S +N TF DR H +S Y LD L +E L
Sbjct: 537 NIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKE------LG 590
Query: 634 WIPEHEAG 641
++P+ E+
Sbjct: 591 YVPDSESA 598
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 186/419 (44%), Gaps = 59/419 (14%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N IR VN + + +F M ++P++ TFP + KAC+ +++ + IHG K
Sbjct: 110 NVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATK 169
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
S + KC L A + DEM+ RDV SWN+++ G+AQ ++ L +
Sbjct: 170 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEV 229
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
M V I D T+ L A VS T Y K
Sbjct: 230 CREMESVKISHDAGTMASLLPA-------------------------VSNTTTENVMYVK 264
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
KM + +++VSWN M+ +++ Y M +GF D ++
Sbjct: 265 DMFFKMGK----------KSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSIT 314
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L + AL G+ +H + ++ + N LI MY+KCG +D AR +F+ + R
Sbjct: 315 SVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSR 374
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK--- 365
VSWTAMIS Y G +A+ LF M+ +G +PD + ++ ++ C +G LE G+
Sbjct: 375 DVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 434
Query: 366 --WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
D+Y + L+ + C ++D+ + G + +A + +P E W ++ C
Sbjct: 435 KLMTDHYKITPRLEH--LAC--MVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGAC 489
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 156/369 (42%), Gaps = 39/369 (10%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L++VHS I + + S+ + +YA D+ A VF I ER V+ N M+
Sbjct: 56 LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPER--NVIIINVMI 113
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ + + + M + D T +L + C +V G+ +H G
Sbjct: 114 RSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLS 173
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ V N L+SMY KCG + AR++ D + R VSW ++++GYAQ D+AL + M
Sbjct: 174 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM 233
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
E+ D T+ S++ A S +NVM
Sbjct: 234 ESVKISHDAGTMASLLP-----------------AVSNTTTENVMYV------------- 263
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+++F+ + +K +VSW MI N VEA++L+ + P+ V+ +VL AC
Sbjct: 264 ---KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPAC 320
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
T L G I K I P L + + D+ + G L A D ++M + D
Sbjct: 321 GDTSALSLGKKIHGYIERKKLI---PNLLLENALIDMYAKCGCLDRARDVFENMKSR-DV 376
Query: 517 GIWGTLLCA 525
W ++ A
Sbjct: 377 VSWTAMISA 385
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I + + + L+ M+ + EP+ ++ + AC S L + IHG+I
Sbjct: 278 WNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 337
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC LD A +F+ M RDV SW AM+ + G + +
Sbjct: 338 RKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 397
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M+ G+ D + + A HA
Sbjct: 398 LFSKMQDSGLVPDSIAFVTTLAACSHA 424
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 299/593 (50%), Gaps = 18/593 (3%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-----SPFVKCDRLD--- 92
L +M I PN + + ACA L D Y +HG+++K PF LD
Sbjct: 175 LVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYA 234
Query: 93 ------CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
A +F E+ D+ SWNA++ G + L+L M + T+
Sbjct: 235 KSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSS 294
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+A + L + +HS + + ++ D V I Y+KC L+ A +VF + +
Sbjct: 295 ALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXK- 353
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
V+ WNS+++G + ++++ + +M G + TT+ ++L S +A V
Sbjct: 354 -DVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQV 412
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H+ I G+ D V N+L+ Y KC ++ A +F+ V++T+MI+ Y+Q G
Sbjct: 413 HTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLG 472
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EAL+++ M+ PD S+ + C A E GK + GL +V N+L
Sbjct: 473 EEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSL 532
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
++MY+KCGSI DA +F + + +VSW+ MI G A +G +AL LF+Q+++ + PN
Sbjct: 533 VNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNH 592
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+T ++VL AC H G + + A +K P +HY+CM D+LGR G+L EA+
Sbjct: 593 ITLVSVLSACNHAGLVTE--ARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVL 650
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
V+ MP ++ A +WG LL A +IH NIE+G + A L LEP + ++ +AN YA G W
Sbjct: 651 VKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMW 710
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
D VA +R MK + VKK PG S + K TF DR H S+ Y LD L
Sbjct: 711 DNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDL 763
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 189/426 (44%), Gaps = 42/426 (9%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC A K+ + + D+ SW+A++ G+ Q G E L +Y M L+G + + T
Sbjct: 92 YSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTF 151
Query: 145 MGLTQAAIHAKHLSLLKS----------------------------------------VH 164
+ + ++L L K VH
Sbjct: 152 SSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVH 211
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ I +G D+D N + YAK + A VF I + +VSWN+++AGC +K
Sbjct: 212 GYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPK--PDIVSWNAVIAGCVLHEK 269
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
D +L M + T+ S L + + GR +HS + + D V
Sbjct: 270 NDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVG 329
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MYSKCG + AR++FD + + + W ++ISGY+ G EA+ LF M G +
Sbjct: 330 LIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFN 389
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ +++ S A + + G + + V N+L+D Y KC + DA ++F
Sbjct: 390 QTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFE 449
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
P + +V++T+MI + G EAL ++ ++ + D++P+ F ++ AC + E+
Sbjct: 450 VCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQ 509
Query: 465 GWAISI 470
G I +
Sbjct: 510 GKQIHV 515
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 121/280 (43%), Gaps = 48/280 (17%)
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+++YSKC AR L + VSW+A+ISGY Q G +EAL ++ M G +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 346 VTVLSMISGCGQSGALELGKWFDNY-----------------------ACSG-------- 374
T S++ GC + LELGK AC+G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 375 ---------GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
G + NAL+DMY+K G A +FY +P+ +VSW +IAGC L+
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ AL L ++ + P+ T + L+AC G ++ G Q + + E D
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGR-----QLHSALMKMDMEPD 323
Query: 486 HYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + D+ + G L++A MP K D +W +++
Sbjct: 324 SFVGVGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSII 362
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 16/246 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I N + + LF M + +E N T I K+ A + + +H +
Sbjct: 358 WNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISI 417
Query: 82 KS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC L+ A K+F+ D+ ++ +M+ ++Q G E L+
Sbjct: 418 KSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALK 477
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
++ M+ I+ D L A + K +H + G+ +DV N+ ++ YA
Sbjct: 478 MYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYA 537
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F I R +VSW++M+ G +L + M+ NG + T+
Sbjct: 538 KCGSIDDASCIFNEIS--WRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITL 595
Query: 248 VSLLSS 253
VS+LS+
Sbjct: 596 VSVLSA 601
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 35 AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK------------ 82
+ L ++ +M+ DI+P+ F + ACA LS + IH H++K
Sbjct: 472 GEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNS 531
Query: 83 --SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ + KC +D A IF+E++ R + SW+AM+ G AQ G L+LFY M GI +
Sbjct: 532 LVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPN 591
Query: 141 FVTVMGLTQAAIHA 154
+T++ + A HA
Sbjct: 592 HITLVSVLSACNHA 605
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 292/572 (51%), Gaps = 39/572 (6%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FDE+ ++ WN M+ G++++ F + + L+ M G++ D T L +
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--CGIEERLRTVVS 211
L + +H + G+ +V V + Y C L A VF C + V++
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD----VIT 186
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN +++ KF++S + M T+V +LS+ + L G+ VHS+
Sbjct: 187 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 246
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSA-------------------------------RV 300
+ + ++ + N +I MY+ CG++DSA R
Sbjct: 247 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 306
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
FD + ++ VSWTAMI GY + EAL LF M+A PD T++S+++ C GA
Sbjct: 307 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 366
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LELG+W Y +K+++ V NALIDMY KCG + A +F + ++ +WT MI G
Sbjct: 367 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 426
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A+NG +ALD+F +++ + P+ +T++ VL ACTHTG ++KG + GI
Sbjct: 427 LAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE- 485
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P + HY C+ DLL R G+LKEA + +++MPIK+++ +WG LL C+++ ++ E V
Sbjct: 486 -PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVK 544
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+ +LEP + A YV + N YA RW+ + +R MM +KK PG SL +NG+ F
Sbjct: 545 QILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFV 604
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
A DR H +++ LD + + YS +
Sbjct: 605 AGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDI 636
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 232/508 (45%), Gaps = 51/508 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR + + L+ +M + ++P+ TFPF+ K + L Y + +HGH++
Sbjct: 86 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 145
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K ++ C +LD A +FD DV +WN ++ + ++G E R
Sbjct: 146 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 205
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + VT++ + A K L K VHS+ + V++++ + N I YA
Sbjct: 206 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 265
Query: 188 KCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVAG 218
C ++ A +F + R + VSW +M+ G
Sbjct: 266 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 325
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++F ++L +R+M + D T+VS+L++ AL G + ++ D
Sbjct: 326 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKND 385
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ V N LI MY KCGD+D A +F + R + +WTAMI G A G ++AL +F M
Sbjct: 386 LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLK 445
Query: 339 AGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
A LPD +T + ++S C +G ++ G K+F G++ N+ L+D+ ++ G +
Sbjct: 446 ASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLK 505
Query: 398 DARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL--AVLQ 454
+A E+ +P K + W ++AGC + E A + Q++EL+ V L +
Sbjct: 506 EAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYA 565
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNP 482
AC L + + + DKGI P
Sbjct: 566 ACKRWNDLRELRQMMM----DKGIKKTP 589
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 6/276 (2%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARVLFDGICD 307
L+S E++ Q + VH I G + + + N +++ + GD AR LFD I +
Sbjct: 21 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
W MI GY++ + L+ M G PD T + G + ALE G+
Sbjct: 81 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 140
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ GL+ NV V AL+ MY CG + AR +F P+ V++W +I+ G+F
Sbjct: 141 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKF 200
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E+ LF + + + P VT + VL AC+ L G + K L
Sbjct: 201 EESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV---KNCKVESNLVLE 257
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ M D+ G++ AL +SM D W T++
Sbjct: 258 NAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIV 292
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 270/506 (53%), Gaps = 5/506 (0%)
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
R S+N ++ F + G E+ L LF M + D TV ++ LS+ +
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
V ++ G D V N+ I YA C D+ A ++F ++ ++ V++WN+M+AG
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQ--VKGVIAWNAMIAGYVKN 250
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ + + ++ M+ D T++S+ ++ G+ + + G ++
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
L+ MY+KCG++D AR LFD + R V+W+AMISGY Q EAL +F M+
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ VT++S++S C GALE GKW +Y L V++ AL+D Y+KCG I DA +
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F ++P + +WT +I G A NG EAL+LF ++E ++ P VTF+ VL AC+H +
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
E+G D GI P ++HY CM DLLGR G + EA F+++MPI+ +A +W L
Sbjct: 491 EEGRRHFTSMTQDYGIC--PRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL 548
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L AC +H N+EIGE + L+P + Y+ ++N YA G+W A +R MK V+
Sbjct: 549 LSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVE 608
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAE 608
K PG SL + G F AED H +
Sbjct: 609 KIPGCSLIELEGTIFEFFAEDSEHPQ 634
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + W++ I + + L +F +M+ ++ PN++T + ACA L L +
Sbjct: 335 SRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKW 394
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H +I + + KC + A K F+ M VR+ +W A++ G A G
Sbjct: 395 VHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGR 454
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
L LF +M I+ VT +G+ A H
Sbjct: 455 SREALELFSSMLEANIEPTDVTFIGVLLACSH 486
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 292/583 (50%), Gaps = 20/583 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W +R NE+ + + + + ++ +++ F KAC ++ DL + IH IV
Sbjct: 122 WKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIV 181
Query: 82 KSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
K P + KC + +YK+F+++ +R+V W +M+ G+ + E L L
Sbjct: 182 KVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVL 241
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F MR + + T L A + L K H I G++ + + + Y K
Sbjct: 242 FNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVK 301
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C D+ A VF E +V W +M+ G T+ +++L+ ++ M G + + T+
Sbjct: 302 CGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIA 359
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+LS L GR +H I G D +V N L+ MY+KC A+ +F+ ++
Sbjct: 360 SVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEK 418
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
V+W ++ISG++Q G + EAL LF M +P+ VTV S+ S C G+L +G
Sbjct: 419 DIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLH 478
Query: 369 NYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y+ G +V V AL+D Y+KCG AR +F + EK ++W+ MI G G+
Sbjct: 479 AYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGD 538
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+L+LF ++++ +PN TF +VL AC+HTG + +G Y D ++ P H
Sbjct: 539 TKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKD--YNFTPSTKH 596
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM D+L R G+L++ALD ++ MPI+ D +G L C +H ++GE V + L
Sbjct: 597 YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 656
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
P A+ YV ++N YA GRW +R +MK+ + K G S+
Sbjct: 657 PDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSI 699
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 184/372 (49%), Gaps = 4/372 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD++ D W +L + V++ + + G D + +A +
Sbjct: 110 VFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQD 169
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +H + + D V + YAKC ++K + VF I LR VV W SM+
Sbjct: 170 LDNGKKIHCQIVKVP-SFDNVVLTGLLDMYAKCGEIKSSYKVFEDI--TLRNVVCWTSMI 226
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
AG D +++ L + M N + T +L+ + AL QG+ H I G +
Sbjct: 227 AGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIE 286
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
L ++ +L+ MY KCGDI +AR +F+ V WTAMI GY G ++EAL LF M
Sbjct: 287 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 346
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G P+ VT+ S++SGCG G LELG+ + G+ D V NAL+ MY+KC
Sbjct: 347 SGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWD-TNVANALVHMYAKCYQN 405
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA+ +F EK +V+W ++I+G + NG EAL LFH++ + PN VT ++ AC
Sbjct: 406 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSAC 465
Query: 457 THTGFLEKGWAI 468
G L G ++
Sbjct: 466 ASLGSLAIGSSL 477
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 146/309 (47%), Gaps = 3/309 (0%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
L+ H G+ D+S+ +S Y K A LVF I E W ++
Sbjct: 72 LRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEP--DFYLWKVILRCY 129
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
++ + + FY +M +GF D L + + L G+ +H + D
Sbjct: 130 CLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDN 188
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V+ L+ MY+KCG+I S+ +F+ I R V WT+MI+GY + +E L LF M
Sbjct: 189 VVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMREN 248
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
L + T +++ C + AL GKWF G++ + + +L+DMY KCG I +A
Sbjct: 249 SVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNA 308
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
R +F +V WT MI G NG EAL LF ++ + ++PN VT +VL C
Sbjct: 309 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLV 368
Query: 460 GFLEKGWAI 468
G LE G +I
Sbjct: 369 GNLELGRSI 377
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 311/608 (51%), Gaps = 31/608 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE----PNNLTFPFIAKACAKLSDLIYSQMIH 77
WNS IR + + ++ LL +M + + + P+ T + CA+ ++ + +H
Sbjct: 256 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 315
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G VK + KC + A IF ++V SWN M+ GF+ G
Sbjct: 316 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 375
Query: 124 NVLRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ M G ++AD VT++ H L LK +H + + + V N
Sbjct: 376 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 435
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+++SYAKC L A+ VF GI R +TV SWN+++ G + SL+ + M +G
Sbjct: 436 FVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D TV SLLS+ ++L G+ VH I + D+ V +++S+Y CG++ + + L
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + D++ VSW +I+GY Q G D AL +F M G ++++ + C +L
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
LG+ YA L+D+ + +LIDMY+K GSI + ++F L EK SW MI G
Sbjct: 614 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 673
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK---GI 478
++G EA+ LF ++ P+ +TFL VL AC H+G + +G ++Y D+
Sbjct: 674 GIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG-----LRYLDQMKSSF 728
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
P L HY+C+ D+LGR G+L +AL V + M ++D GIW +LL +C+IH N+E+GE
Sbjct: 729 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 788
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA LF+LEP YV ++N YA G+W+ V +R M ++K G S +N K
Sbjct: 789 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 848
Query: 598 TFTAEDRY 605
+F +R+
Sbjct: 849 SFVVGERF 856
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/542 (26%), Positives = 253/542 (46%), Gaps = 39/542 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLL--LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
RS + QWN+ I + ++NE + +L + D+ P++ T+P + KACA +SD+
Sbjct: 147 RSKNLFQWNAVI-SSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 73 SQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+HG +VK+ V+ + A ++FD M R++ SWN+M+ F+
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 119 MGFLENVLRLFYNMRLV----GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GF E L M D T++ + + + L K VH + + + +D
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
++ + N + Y+KC + A+++F + VVSWN+MV G + + + R
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIF--KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 235 MMYNGFRLDVTTVVSLLSSFVC--PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M+ G + V L + VC L + +H + + F + V N ++ Y+KC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + A+ +F GI +T SW A+I G+AQ D +L M+ +G LPD TV S++
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S C + +L LGK + L+ ++ V +++ +Y CG + + LF A+ +K +V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-----WA 467
SW T+I G NG AL +F Q++ ++ ++ + V AC+ L G +A
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ + DD I+ + + D+ + G + ++ + KS A W ++
Sbjct: 624 LKHLLEDDAFIACS--------LIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYG 674
Query: 528 IH 529
IH
Sbjct: 675 IH 676
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 218/464 (46%), Gaps = 22/464 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSD 69
++ + + WN+ + + + H T + RQM D++ + +T C S
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +H + +K FV KC L A ++F + + V SWNA++ G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
AQ L M++ G+ D TV L A K L L K VH F I ++ D
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V + +S Y C +L + +F +E++ ++VSWN+++ G D +L +R M
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDK--SLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G +L +++ + + +L GR H++ + + + D + +LI MY+K G I
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 648
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ +F+G+ +++ SW AMI GY G EA++LF M+ G PD +T L +++ C
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Query: 356 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA-RELFYALPEKIVVS 413
SG + G ++ D S GLK N+ +IDM + G + A R + + E+ V
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 414 -WTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQA 455
W ++++ C ++ + +L EL+ +P L+ L A
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 204/448 (45%), Gaps = 23/448 (5%)
Query: 26 IREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA-KLSDLIYSQMIHGHIVKSP 84
+REA+ LLL K+ DIE ++ + + D++ +++I +
Sbjct: 83 VREALG-------LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRII------TM 129
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVT 143
+ C D + +FD + +++ WNA++ +++ + VL F M + D T
Sbjct: 130 YAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFT 189
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ +A + + +VH + G+ DV V N +S Y + A +F +
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNG---FRLDVTTVVSLLSSFVCPEA 259
E R +VSWNSM+ + ++S MM NG F DV T+V++L
Sbjct: 250 E--RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+ G+ VH + D ++ + N L+ MYSKCG I +A+++F ++ VSW M+ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 320 YAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
++ +GD + M A GE D VT+L+ + C L K Y+
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N +V NA + Y+KCGS+ A+ +F+ + K V SW +I G A + + +LD Q+
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG 465
L P+ T ++L AC+ L G
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLG 515
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LP 343
+I+MY+ CG D +R +FD + + W A+IS Y++ DE L F M + + LP
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T +I C + +G GL ++V V NAL+ Y G + DA +LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD----LRPNRVTFLAVLQACTHT 459
+PE+ +VSW +MI + NG E+ L ++ME + P+ T + VL C
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 460 -----GFLEKGWAISIIQYDDKGISYNPELDHYS 488
G GWA+ ++ D + + N +D YS
Sbjct: 306 REIGLGKGVHGWAVK-LRLDKELVLNNALMDMYS 338
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS------MISGCGQSGALELGKWFDNY 370
IS + + GDLD++ R E +L ++ G+ +E+G+
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 371 AC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
S L+++ ++C +I MY+ CGS D+R +F AL K + W +I+ + N + E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 430 ALDLFHQLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
L+ F +++ DL P+ T+ V++AC + G A+
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
>gi|357156964|ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Brachypodium distachyon]
Length = 710
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/499 (35%), Positives = 269/499 (53%), Gaps = 8/499 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLV--GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
A ++FD RDV WN +L + + L L+ MR G+ D T + A
Sbjct: 202 ARRVFDAAPHRDVYMWNTLLRVHAHSHAEPQSSALSLYKRMRAAGVAPDHYTYPIVLPAC 261
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
A+ L ++ H + + D V + I+ Y + D+ AE VF G RTVVS
Sbjct: 262 AAARAPRLGRAAHGDAVRFALAGDCFVHSALIAMYCQDGDVADAEQVFLGTAGASRTVVS 321
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
W +MVAG F +++ + ++ G + T++S L E L G +VH +
Sbjct: 322 WTAMVAGYVQNCFFGEAIAVFGAVVAEGVLPNEITLISFLPCLQGQEWLTAGEMVHGFAL 381
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
FD +V ++N L++MY KCG + SA+ LFDG+ RT VSW M++ Y Q D +A++
Sbjct: 382 KLRFDANVPLLNALVAMYGKCGSVLSAKGLFDGMATRTLVSWNTMVAMYEQNSDGVQAIK 441
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
F M D VT++S++S C +SGALE GKW A S GL ++ + N L+DMY+
Sbjct: 442 FFRRMLTEKVGFDCVTLVSVLSACARSGALETGKWVHELARSHGLDNDARIGNVLVDMYA 501
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCG I ARE+F +L E VVSW+ MI+ A +GE EAL LF + ++PN T A
Sbjct: 502 KCGEIAYAREVFDSLREPGVVSWSAMISAYANHGEHQEALKLFSLMKGEGVKPNSFTVTA 561
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISY--NPELDHYSCMADLLGRKGKLKEALDFVQS 509
VL AC H+G +++G + ++ + Y +P L+HY+CM D+LGR G+L EA + ++
Sbjct: 562 VLVACGHSGLVDEG----LKHFNSIAMEYQMSPTLEHYACMLDMLGRAGRLVEAYEIIRG 617
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
M ++ D +WG L C++H N+E+ E+VA LF+ + YV MAN Y G +
Sbjct: 618 MSVQPDKCVWGAFLGGCRLHCNLELAEFVANDLFQSGSNDVTFYVLMANMYFEAGMLEDA 677
Query: 570 ANIRTMMKRNQVKKFPGQS 588
+R MK ++KK G S
Sbjct: 678 ERMRRAMKEMELKKTAGHS 696
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 221/459 (48%), Gaps = 38/459 (8%)
Query: 22 WNSQIREAVNKNEAHKT--LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WN+ +R + + ++ L L+++M+ + P++ T+P + ACA + HG
Sbjct: 217 WNTLLRVHAHSHAEPQSSALSLYKRMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGD 276
Query: 80 IVKSPFVK------------CDRLDC--AYKIF--DEMAVRDVASWNAMLVGFAQMGFLE 123
V+ C D A ++F A R V SW AM+ G+ Q F
Sbjct: 277 AVRFALAGDCFVHSALIAMYCQDGDVADAEQVFLGTAGASRTVVSWTAMVAGYVQNCFFG 336
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ +F + G+ + +T++ + L+ + VH F + + DA+V + N +
Sbjct: 337 EAIAVFGAVVAEGVLPNEITLISFLPCLQGQEWLTAGEMVHGFALKLRFDANVPLLNALV 396
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y KC + A+ +F G+ RT+VSWN+MVA ++ F+R M+ D
Sbjct: 397 AMYGKCGSVLSAKGLFDGMA--TRTLVSWNTMVAMYEQNSDGVQAIKFFRRMLTEKVGFD 454
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+VS+LS+ AL G+ VH +G D D + N L+ MY+KCG+I AR +FD
Sbjct: 455 CVTLVSVLSACARSGALETGKWVHELARSHGLDNDARIGNVLVDMYAKCGEIAYAREVFD 514
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ + VSW+AMIS YA G+ EAL+LF M+ G P+ TV +++ CG SG ++
Sbjct: 515 SLREPGVVSWSAMISAYANHGEHQEALKLFSLMKGEGVKPNSFTVTAVLVACGHSGLVDE 574
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIA 419
G K F++ A + + ++DM + G + +A E+ + P+K V W +
Sbjct: 575 GLKHFNSIAMEYQMSPTLEHYACMLDMLGRAGRLVEAYEIIRGMSVQPDKCV--WGAFLG 632
Query: 420 GCALN-----GEFVEALDLFHQLMELDLRPNRVTFLAVL 453
GC L+ EFV A DLF N VTF ++
Sbjct: 633 GCRLHCNLELAEFV-ANDLFQS------GSNDVTFYVLM 664
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 154/408 (37%), Gaps = 52/408 (12%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S T+ W + + V + + +F + + PN +T L +M
Sbjct: 316 SRTVVSWTAMVAGYVQNCFFGEAIAVFGAVVAEGVLPNEITLISFLPCLQGQEWLTAGEM 375
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG +K F KC + A +FD MA R + SWN M+ + Q
Sbjct: 376 VHGFALKLRFDANVPLLNALVAMYGKCGSVLSAKGLFDGMATRTLVSWNTMVAMYEQNSD 435
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
++ F M + D VT++ + A + L K VH G+D D + N
Sbjct: 436 GVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALETGKWVHELARSHGLDNDARIGNV 495
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YAKC ++ A VF + E VVSW++M++ + ++L + M G +
Sbjct: 496 LVDMYAKCGEIAYAREVFDSLRE--PGVVSWSAMISAYANHGEHQEALKLFSLMKGEGVK 553
Query: 242 LDVTTVVSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ TV ++L + C + LV L H + I + + ++ +
Sbjct: 554 PNSFTVTAVLVA--CGHSGLVDEGLKHFNSIAMEYQMSPTLEH----------------- 594
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+ M+ + G L EA + M PD + + GC
Sbjct: 595 ------------YACMLDMLGRAGRLVEAYEIIRGMSVQ---PDKCVWGAFLGGCRLHCN 639
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
LEL ++ N G D V + +MY + G + DA + A+ E
Sbjct: 640 LELAEFVANDLFQSGSND-VTFYVLMANMYFEAGMLEDAERMRRAMKE 686
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/630 (31%), Positives = 317/630 (50%), Gaps = 78/630 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V ++ L LF++M++ + + TF + ++CA LS L +HGH +
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHAL 302
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F +KC+ L A K+F+ + ++ S+NA++VG+A+
Sbjct: 303 KTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD------- 355
Query: 128 LFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
G+ D V++ G +A A+ L L+ VH + +++ V N + Y
Sbjct: 356 -------KGLGLDEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVANAILDMY 407
Query: 187 AKCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC L A LVF EE + R VSWN+++A + +L+ + H
Sbjct: 408 GKCGALVEACLVF---EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIH----------- 453
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+++ RL G D V + LI MYSKCG ++ A L D +
Sbjct: 454 ------------NRIIKSRL--------GLDSFVGI--ALIDMYSKCGMMEKAEKLHDRL 491
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++T VSW A+ISG++ + +EA + F M G PD T +++ C +ELGK
Sbjct: 492 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 551
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
L+ + + + L+DMYSKCG++ D + +F P + V+W M+ G A +G
Sbjct: 552 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 611
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL +F + +++PN TFLAVL+AC H G +EKG + G+ +P+L+
Sbjct: 612 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGL--DPQLE 669
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HYSC+ D++GR G++ +AL+ ++ MP ++DA IW TLL CKIH N+E+ E AY + +L
Sbjct: 670 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQL 729
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP +A YV ++N YA G W+ V +R MM+ N +KK PG S I + F D+
Sbjct: 730 EPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKA 789
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKWI 635
H S+ Y LD L + +KW+
Sbjct: 790 HPRSKEIYENLDVL---------TDEMKWV 810
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 153/582 (26%), Positives = 236/582 (40%), Gaps = 123/582 (21%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEM 101
TF I + C+ L + H ++ + F +KC L+ A+K+FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 102 AVRDVASWNAMLVGFAQM--------------------------GFLEN-----VLRLFY 130
RD SWNAML G+A G+L N V+ +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLK------SVHSFGIHIGVDADVSVCNTWIS 184
M +G TV T A+ K S L+ +H + +G D DV + +
Sbjct: 164 QMGRMG------TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 217
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC L + F + E + VSW++++AGC D L ++ M G +
Sbjct: 218 MYAKCKKLDCSIQFFHSMPE--KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQ 275
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+T S+ S AL G +H H + F DV + + MY KC ++ A+ LF+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 305 ICDRTRVSWTAMISGYAQ--KG-DLDEALRLFFAMEA----AGELPDL-VTVLSMISGC- 355
+ + S+ A+I GYA+ KG LDE + L A A G+L L V LSM S C
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGLGLDE-VSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQ 394
Query: 356 -------------GQSGAL---------------------------------ELGKWFDN 369
G+ GAL L + N
Sbjct: 395 SNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHN 454
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
L + V ALIDMYSKCG + A +L L E+ VVSW +I+G +L + E
Sbjct: 455 RIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEE 514
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHY 487
A F +++E+ + P+ T+ +L C + +E G I II+ + + +Y
Sbjct: 515 AQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS----- 569
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G +++ + P + D W ++C H
Sbjct: 570 STLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQH 610
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 18/173 (10%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+L+ T+ WN+ I + ++ + F +M + ++P+N T+ I CA L
Sbjct: 486 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 545
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ + IH I+K + KC + IF++ RD +WNAM+
Sbjct: 546 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 605
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSF 166
G+AQ G E L++F M+L ++ + T + + +A H+ L+ K +H F
Sbjct: 606 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRA---CGHMGLVEKGLHYF 655
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 311/608 (51%), Gaps = 31/608 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE----PNNLTFPFIAKACAKLSDLIYSQMIH 77
WNS IR + + ++ LL +M + + + P+ T + CA+ ++ + +H
Sbjct: 6 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G VK + KC + A IF ++V SWN M+ GF+ G
Sbjct: 66 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125
Query: 124 NVLRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ M G ++AD VT++ H L LK +H + + + V N
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 185
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+++SYAKC L A+ VF GI R +TV SWN+++ G + SL+ + M +G
Sbjct: 186 FVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 243
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D TV SLLS+ ++L G+ VH I + D+ V +++S+Y CG++ + + L
Sbjct: 244 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 303
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + D++ VSW +I+GY Q G D AL +F M G ++++ + C +L
Sbjct: 304 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 363
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
LG+ YA L+D+ + +LIDMY+K GSI + ++F L EK SW MI G
Sbjct: 364 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 423
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK---GI 478
++G EA+ LF ++ P+ +TFL VL AC H+G + +G ++Y D+
Sbjct: 424 GIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG-----LRYLDQMKSSF 478
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
P L HY+C+ D+LGR G+L +AL V + M ++D GIW +LL +C+IH N+E+GE
Sbjct: 479 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 538
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA LF+LEP YV ++N YA G+W+ V +R M ++K G S +N K
Sbjct: 539 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 598
Query: 598 TFTAEDRY 605
+F +R+
Sbjct: 599 SFVVGERF 606
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 218/464 (46%), Gaps = 22/464 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSD 69
++ + + WN+ + + + H T + RQM D++ + +T C S
Sbjct: 101 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 160
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +H + +K FV KC L A ++F + + V SWNA++ G
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 220
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
AQ L M++ G+ D TV L A K L L K VH F I ++ D
Sbjct: 221 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 280
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V + +S Y C +L + +F +E++ ++VSWN+++ G D +L +R M
Sbjct: 281 LFVYLSVLSLYIHCGELCTVQALFDAMEDK--SLVSWNTVITGYLQNGFPDRALGVFRQM 338
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G +L +++ + + +L GR H++ + + + D + +LI MY+K G I
Sbjct: 339 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 398
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ +F+G+ +++ SW AMI GY G EA++LF M+ G PD +T L +++ C
Sbjct: 399 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 458
Query: 356 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA-RELFYALPEKIVVS 413
SG + G ++ D S GLK N+ +IDM + G + A R + + E+ V
Sbjct: 459 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 518
Query: 414 -WTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQA 455
W ++++ C ++ + +L EL+ +P L+ L A
Sbjct: 519 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 562
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 202/437 (46%), Gaps = 22/437 (5%)
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMRLV----GIQADFVTVMGLTQAAIHAKHLSL 159
R+ SWN+M+ F+ GF E L M D T++ + + + L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
K VH + + + +D ++ + N + Y+KC + A+++F + VVSWN+MV G
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF--KMNNNKNVVSWNTMVGGF 118
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC--PEALVQGRLVHSHGIHYGFDL 277
+ + + R M+ G + V L + VC L + +H + + F
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 178
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+ V N ++ Y+KCG + A+ +F GI +T SW A+I G+AQ D +L M+
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+G LPD TV S++S C + +L LGK + L+ ++ V +++ +Y CG +
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+ LF A+ +K +VSW T+I G NG AL +F Q++ ++ ++ + V AC+
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358
Query: 458 HTGFLEKG-----WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
L G +A+ + DD I+ + + D+ + G + ++ +
Sbjct: 359 LLPSLRLGREAHAYALKHLLEDDAFIACS--------LIDMYAKNGSITQSSKVFNGLKE 410
Query: 513 KSDAGIWGTLLCACKIH 529
KS A W ++ IH
Sbjct: 411 KSTAS-WNAMIMGYGIH 426
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/475 (36%), Positives = 261/475 (54%), Gaps = 6/475 (1%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWI--SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ +H+F I GV ++ + + C + A +F I+ + +WN+M+
Sbjct: 56 FRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNP--NIFTWNTMIR 113
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G + +L YR M + D T LL + + +G VHS I GF+
Sbjct: 114 GYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES 173
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
V V NTL+ MY+ CG +SA LF+ + +R V+W ++I+GYA G +EAL LF M
Sbjct: 174 LVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG 233
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G PD T++S++S C + GAL LG+ Y GL N+ NAL+D+Y+KCGSI
Sbjct: 234 LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIR 293
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A ++F + EK VVSWT++I G A+NG EAL+LF +L L P+ +TF+ VL AC+
Sbjct: 294 QAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
H G +++G+ ++ GI P+++HY CM DLLGR G +K+A +F+Q+MP++ +A
Sbjct: 354 HCGMVDEGFDYFKRMKEEYGIV--PKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAV 411
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK 577
+W TLL AC IH ++ +GE L +LEP + YV ++N YA RW V +R M
Sbjct: 412 VWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTML 471
Query: 578 RNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
R VKK PG SL + + F DR H ++E Y L + + E Y H+
Sbjct: 472 REGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHI 526
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 174/356 (48%), Gaps = 4/356 (1%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C + A++IF ++ ++ +WN M+ G+A+ L L+ M + I+ D T L
Sbjct: 87 CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+A + + VHS I G ++ V V NT + YA C + A +F + E R
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAE--R 204
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+V+WNS++ G + +++L +R M G D T+VSLLS+ AL GR H
Sbjct: 205 NLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAH 264
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ + G D ++ N L+ +Y+KCG I A +FD + +++ VSWT++I G A G
Sbjct: 265 VYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGK 324
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNAL 386
EAL LF +E G +P +T + ++ C G ++ G +F G+ + +
Sbjct: 325 EALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCM 384
Query: 387 IDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+D+ + G + A E +P + V W T++ C ++G QL++L+
Sbjct: 385 VDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLE 440
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 16/251 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
++ I WN+ IR L L+RQM + IEP+ T+PF+ KA AKL D+ +
Sbjct: 101 QNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGE 160
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H +++ F C + A+K+F+ MA R++ +WN+++ G+A G
Sbjct: 161 KVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNG 220
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L LF M L G++ D T++ L A L+L + H + + +G+D ++ N
Sbjct: 221 RPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGN 280
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ YAKC ++ A VF +EE ++VVSW S++ G ++L ++ + G
Sbjct: 281 ALLDLYAKCGSIRQAHKVFDEMEE--KSVVSWTSLIVGLAVNGFGKEALELFKELERKGL 338
Query: 241 RLDVTTVVSLL 251
T V +L
Sbjct: 339 MPSEITFVGVL 349
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 319/646 (49%), Gaps = 36/646 (5%)
Query: 15 RSSTINQ--WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + + L FR M ++EP++ T + AC+ L
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 70 LIYSQMIHGHIVK-------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
L+ + +H + ++ + + K +L + + RD+ +WN +L
Sbjct: 218 LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDAD 175
Q L L M L G++ D T+ + A H + L K +H++ + G +D +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + + Y C + VF G+ +R + WN+M+AG + + ++L + M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDR--KIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 236 MYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ G + TT+ ++ + V A + +H + G D D V NTL+ MYS+ G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME--------AAGEL---P 343
ID A +F + DR V+W MI+GY ++AL L M+ A + P
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++F
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+P+K V++W +I ++G EA+DL +M ++PN VTF++V AC+H+G ++
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTL 522
+G I + D G+ P DHY+C+ DLLGR G++KEA + MP + AG W +L
Sbjct: 636 EGLRIFYVMKPDYGV--EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L A +IH N+EIGE A L +LEP+ A+ YV +AN Y+ G WD +R MK V+
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K PG S + F A D H +SE L+ L R+E Y
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 259/561 (46%), Gaps = 40/561 (7%)
Query: 2 AVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA 61
AVS P I +S + W +R V N + +L + M I+P+N FP +
Sbjct: 47 AVSGAPSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALL 104
Query: 62 KACAKLSDLIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDV 106
KA A L D+ + IH H+ K + + KC YK+FD ++ R+
Sbjct: 105 KAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ 164
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLLKSV 163
SWN+++ E L F M ++ T++ + A + + L + K V
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H++G+ G + + + NT ++ Y K L ++++ R +V+WN++++ +
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVTWNTVLSSLCQNE 281
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVI 282
+ ++L + R M+ G D T+ S+L + E L G+ +H++ + G D + V
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGE 341
+ L+ MY C + S R +FDG+ DR W AMI+GY+Q EAL LF M E+AG
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
L + T+ ++ C +SGA + + GL + V N L+DMYS+ G I A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-----------LRPNRVTFL 450
+F + ++ +V+W TMI G + +AL L H++ L+ L+PN +T +
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
+L +C L KG I + + ++ S + D+ + G L+ + +
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKN---NLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 511 PIKSDAGIWGTLLCACKIHLN 531
P K + W ++ A +H N
Sbjct: 579 PQK-NVITWNVIIMAYGMHGN 598
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 279/542 (51%), Gaps = 35/542 (6%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
WN ++ + + L LF M G+ + T L ++ +K K +H+ +
Sbjct: 95 WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHAL 154
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER----------------------- 205
+ + V + I Y++ +L+ A LVF R
Sbjct: 155 KLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARR 214
Query: 206 ------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ VVSWN+M+AG +F+++L + M + +T+VS+LS+ +
Sbjct: 215 LFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRS 274
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L G+ + S GF ++ ++N L+ MYSKCG+I +AR LFDG+ D+ + W MI G
Sbjct: 275 LELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGG 334
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG----G 375
Y +EAL LF M P+ VT L+++ C GAL+LGKW Y G
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTG 394
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+NV + ++I MY+KCG + A ++F ++ + + SW MI+G A+NG AL LF
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFE 454
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+++ +P+ +TF+ VL ACT GF+E G D GIS P+L HY CM DLL
Sbjct: 455 EMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGIS--PKLQHYGCMIDLLA 512
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R GK EA + +M ++ D IWG+LL AC+IH +E GEYVA LF+LEP ++ YV
Sbjct: 513 RSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVL 572
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
++N YA GRWD VA IRT + +KK PG + I+G F D++H +SE + +
Sbjct: 573 LSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRM 632
Query: 616 LD 617
LD
Sbjct: 633 LD 634
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 193/398 (48%), Gaps = 35/398 (8%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWIS--SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
LK +HS I G+ + + I + + DL A +F I + + WN+++
Sbjct: 41 LKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIR 100
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
+ SL+ + M+++G + T SL S +A + + +H+H + L
Sbjct: 101 AHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHL 160
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL----- 332
V +LI MYS+ G++ AR++FD R VS+TA+I+GY +G +D+A RL
Sbjct: 161 HPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP 220
Query: 333 --------------------------FFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
F M+ A P+ T++S++S CG +LELGKW
Sbjct: 221 AKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKW 280
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
++ G N+ + NAL+DMYSKCG IG AR+LF + +K V+ W TMI G
Sbjct: 281 IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELD 485
+ EAL LF ++ ++ PN VTFLAVL AC G L+ G W + I + KG +
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
++ + + + G ++ A +SM +S A W ++
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLAS-WNAMI 437
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 222/481 (46%), Gaps = 57/481 (11%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
++ I WN+ IR +L LF QM + + PN+ TFP + K+CAK +
Sbjct: 87 HQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEA 146
Query: 74 QMIHGHIVK---------------------------------------------SPFVKC 88
+ +H H +K + +V
Sbjct: 147 KQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSE 206
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
+D A ++FDE+ +DV SWNAM+ G+ Q G E L F M+ + + T++ +
Sbjct: 207 GHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVL 266
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
A H + L L K + S+ G ++ + N + Y+KC ++ A +F G+E+ +
Sbjct: 267 SACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMED--KD 324
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
V+ WN+M+ G + ++++L + M+ + T +++L + AL G+ VH+
Sbjct: 325 VILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHA 384
Query: 269 H------GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
+ G G +VS+ ++I MY+KCG ++ A +F + R+ SW AMISG A
Sbjct: 385 YIDKNLKGT--GNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAM 442
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVM 381
G + AL LF M G PD +T + ++S C Q+G +ELG ++F + G+ +
Sbjct: 443 NGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQ 502
Query: 382 VCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ID+ ++ G +A+ L + E W +++ C ++G+ + +L EL
Sbjct: 503 HYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFEL 562
Query: 441 D 441
+
Sbjct: 563 E 563
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 319/646 (49%), Gaps = 36/646 (5%)
Query: 15 RSSTINQ--WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + + L FR M ++EP++ T + AC+ L
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 70 LIYSQMIHGHIVK-------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
L+ + +H + ++ + + K +L + + RD+ +WN +L
Sbjct: 218 LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDAD 175
Q L L M L G++ D T+ + A H + L K +H++ + G +D +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + + Y C + VF G+ +R + WN+M+AG + + ++L + M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDR--KIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 236 MYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ G + TT+ ++ + V A + +H + G D D V NTL+ MYS+ G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME--------AAGEL---P 343
ID A +F + DR V+W MI+GY ++AL L M+ A + P
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++F
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+P+K V++W +I ++G EA+DL +M ++PN VTF++V AC+H+G ++
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTL 522
+G I + D G+ P DHY+C+ DLLGR G++KEA + MP + AG W +L
Sbjct: 636 EGLRIFYVMKPDYGV--EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L A +IH N+EIGE A L +LEP+ A+ YV +AN Y+ G WD +R MK V+
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K PG S + F A D H +SE L+ L R+E Y
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 259/561 (46%), Gaps = 40/561 (7%)
Query: 2 AVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA 61
AVS P I +S + W +R V N + +L + M I+P+N FP +
Sbjct: 47 AVSGAPSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALL 104
Query: 62 KACAKLSDLIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDV 106
KA A L D+ + IH H+ K + + KC YK+FD ++ R+
Sbjct: 105 KAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ 164
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLLKSV 163
SWN+++ E L F M ++ T++ + A + + L + K V
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H++G+ G + + + NT ++ Y K L ++++ R +V+WN++++ +
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVTWNTVLSSLCQNE 281
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVI 282
+ ++L + R M+ G D T+ S+L + E L G+ +H++ + G D + V
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGE 341
+ L+ MY C + S R +FDG+ DR W AMI+GY+Q EAL LF M E+AG
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
L + T+ ++ C +SGA + + GL + V N L+DMYS+ G I A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-----------LRPNRVTFL 450
+F + ++ +V+W TMI G + +AL L H++ L+ L+PN +T +
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
+L +C L KG I + + ++ S + D+ + G L+ + +
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKN---NLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 511 PIKSDAGIWGTLLCACKIHLN 531
P K + W ++ A +H N
Sbjct: 579 PQK-NVITWNVIIMAYGMHGN 598
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/592 (31%), Positives = 310/592 (52%), Gaps = 21/592 (3%)
Query: 40 LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPF 85
L R + ++P+ TFP + + C + DL + +H H+V+ + +
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
VKC + A +FD M RD+ SWNAM+ G+ + G L LF+ MR + + D +T+
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ A L + +H++ I G D+SVCN+ Y + AE +F +E +
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+VSW +M++G Y D +++ YR M + + D TV ++LS+ L G
Sbjct: 362 --DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H I V V N LI+MYSKC ID A +F I + +SWT++I+G
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
EAL M+ + P+ +T+ + ++ C + GAL GK + G+ + + NA
Sbjct: 480 CFEALIFLRQMKMTLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY +CG + A F + +K V SW ++ G + G+ ++LF ++++ +RP+
Sbjct: 539 LLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TF+++L C+ + + +G + + +D G++ P L HY+C+ DLLGR G+L+EA
Sbjct: 598 EITFISLLCGCSKSQMVRQG-LMYFSKMEDYGVT--PNLKHYACVVDLLGRAGELQEAHK 654
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+Q MP+ D +WG LL AC+IH I++GE A +F+L+ S Y+ + N YA G+
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGK 714
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
W VA +R MMK N + G S + GK F ++D+YH +++ VL+
Sbjct: 715 WREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 221/426 (51%), Gaps = 23/426 (5%)
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLS-----LLKSVH 164
L G G LE ++L +M+ + + D FV ++ L + + S L S+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
S G+ +G N +++ + + +L A VF + ER + SWN +V G
Sbjct: 126 SLGVELG--------NAFLAMFVRFGNLVDAWYVFGKMSER--NLFSWNVLVGGYAKQGY 175
Query: 225 FDDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
FD+++ Y M++ G + DV T +L + L +G+ VH H + YG++LD+ V+N
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
LI+MY KCGD+ SAR+LFD + R +SW AMISGY + G E L LFFAM P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
DL+T+ S+IS C G LG+ Y + G ++ VCN+L MY GS +A +LF
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ K +VSWTTMI+G N +A+D + + + ++P+ +T AVL AC G L+
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G + + + ISY ++ + ++ + + +ALD ++P K+ W +++
Sbjct: 416 TGVELHKLAIKARLISYVIVANN---LINMYSKCKCIDKALDIFHNIPRKNVIS-WTSII 471
Query: 524 CACKIH 529
+++
Sbjct: 472 AGLRLN 477
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 194/369 (52%), Gaps = 4/369 (1%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-G 136
G+ + FV+ L A+ +F +M+ R++ SWN ++ G+A+ G+ + + L++ M V G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ D T + + L+ K VH + G + D+ V N I+ Y KC D+K A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
L+F + R ++SWN+M++G + L + M D+ T+ S++S+
Sbjct: 252 LLFDRMPR--RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
GR +H++ I GF +D+SV N+L MY G A LF + + VSWT M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
ISGY D+A+ + M+ PD +TV +++S C G L+ G A L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
V+V N LI+MYSKC I A ++F+ +P K V+SWT++IAG LN EAL +F +
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLR 488
Query: 437 LMELDLRPN 445
M++ L+PN
Sbjct: 489 QMKMTLQPN 497
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/596 (30%), Positives = 303/596 (50%), Gaps = 18/596 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S+I V +N++ + LF+ M + PN++T + +A + L ++I G ++
Sbjct: 57 WTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVI 116
Query: 82 KSPFVKCDRLDCA-------------YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
K F + A +KIF++ ++D+ W+AM+ + G +
Sbjct: 117 KLGFESEVSVATALIGFYSDYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEI 176
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M+ G++ + V+++ + A + L K +H F I +V N+ + YAK
Sbjct: 177 FRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAK 236
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C + K + LVF I E+ ++SW +++ GC D ++ + M ++ F D T V
Sbjct: 237 CRNFKASMLVFDQILEK--DLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQ 294
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
L+ + + + G H + G VS+ L+ MY+K G+++SA ++FD + +
Sbjct: 295 DLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKK 354
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+SW+AMIS +A AL F M++ E P+ +T +S++ C GA ELG+
Sbjct: 355 DYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQ 414
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
+A G N + +ALID+Y K G I R +F +P K +V W++MI G LNG
Sbjct: 415 AHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGD 474
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS 488
EAL+ F ++ ++PN V F++VL AC+H G +GW+ GI P+L HY+
Sbjct: 475 EALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGII--PKLPHYA 532
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK-IHLNIEIGEYVAYCLFKLEP 547
CM DL+ R+G ++ AL FV MP++ D IWG LL C+ H +IEI E VA L L+P
Sbjct: 533 CMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDP 592
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+ + YV ++N YA GRW V +R ++ +KK G S+ C +D
Sbjct: 593 QNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEAQLDFCLERRKD 648
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 202/419 (48%), Gaps = 7/419 (1%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+V SW + + + E + LF M + + + VTV+ + +A +++ +
Sbjct: 53 NVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVIC 112
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
I +G +++VSV I Y+ D+ + +F + ++ +V W++MV+ C +
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIFN--QTPIKDLVLWSAMVSACVKSGQ 169
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+ ++ +R M Y+G + ++VS+L + AL+ G+ +H I F +V N+
Sbjct: 170 YGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNS 229
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+ MY+KC + ++ ++FD I ++ +SWT +I G + EA + F M+ + D
Sbjct: 230 LVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGAD 289
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
V +I Q+ + G F + GL V + AL+ MY+K G + A +F
Sbjct: 290 ETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFD 349
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
L +K +SW+ MI+ A + AL+ F Q+ D RPN +TF+++LQAC+ G E
Sbjct: 350 QLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQEL 409
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G +I G N L S + DL + G++ + +P K D W +++
Sbjct: 410 GESIQ-AHATKAGYLSNAFLS--SALIDLYCKFGRINQGRAIFNEIPTK-DLVCWSSMI 464
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 6/227 (2%)
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
V F G D +SWT+ IS ++ + A+ LF M + P+ VTVLS+I G
Sbjct: 45 VEFHGEKDNV-ISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLG 103
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
++ + G + V V ALI YS +G ++F P K +V W+ M++
Sbjct: 104 LEDMMRVICGSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVS 162
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
C +G++ EA ++F + + PN V+ +++L AC + G L G I
Sbjct: 163 ACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKK---M 219
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
++P + ++ + D+ + K ++ V ++ D W T++ C
Sbjct: 220 FHPLTNVHNSLVDMYAKCRNFKASM-LVFDQILEKDLISWTTIIRGC 265
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/660 (30%), Positives = 314/660 (47%), Gaps = 88/660 (13%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKI 97
PN+ F + +C + ++++H I+ + F KCD LD A K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
FD M R+ +WN+++ + GFL+ RLF +M + V G Q + L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 158 SLLKSVH---------SFG-----------IHIGVD-----------ADVSVCNTWISSY 186
+H SFG +++G DV + + I Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC + AE VF G+ ER +V+WNS++ ++L + MM +G D T
Sbjct: 193 SKCGSVACAEEVFSGMIER--NLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFD-- 303
+ S++S+ AL +G +H+ + F D+ + N L+ MY+KC ++ AR +FD
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 304 -----------------------------GICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ R VSW A+I+GY Q G+ +EALRLF
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWF------DNYACSGGLKDNVMVCNALID 388
++ P T +++S C L LG+ + G + ++ V N+LID
Sbjct: 371 LLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLID 430
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY KCGSI D +F + E+ VSW +I G A NG EAL +F +++ +P+ VT
Sbjct: 431 MYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVT 490
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
+ VL AC+H G +E+G ++ G+ P DHY+CM DLLGR G L EA + ++
Sbjct: 491 MIGVLCACSHAGLVEEGRHY-FFSMEEHGLI--PLKDHYTCMVDLLGRAGCLNEAKNLIE 547
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
+MP+ DA +WG+LL ACK+H NIE+G++ A L +++P ++ PYV ++N YA GRW
Sbjct: 548 AMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGD 607
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
V +R +M++ V K PG S + + F +D+ H + Y VL L + Y
Sbjct: 608 VVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGY 667
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 212/474 (44%), Gaps = 57/474 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + ++L F +M + D N +F ACA L DL +H +
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC + CA ++F M R++ +WN+++ + Q G L
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSY 186
+F M G++ D VT+ + A L +H+ + D+ + N + Y
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294
Query: 187 AKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVA 217
AKC + A VF + R R VVSWN+++A
Sbjct: 295 AKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIA 354
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G T + +++L +R + T +LLS+ L+ GR H+H + GF+
Sbjct: 355 GYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEF 414
Query: 278 ------DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
D+ V N+LI MY KCG I+ +F+ + +R VSW A+I GYAQ G EAL+
Sbjct: 415 QSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQ 474
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSG--GLKDNVMVCNALID 388
+F M GE PD VT++ ++ C +G +E G+ +F + G LKD+ ++D
Sbjct: 475 IFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY---TCMVD 531
Query: 389 MYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ + G + +A+ L A+P V W +++A C ++G +L+E+D
Sbjct: 532 LLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEID 585
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/634 (31%), Positives = 316/634 (49%), Gaps = 66/634 (10%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKI 97
PN+ F + +C + ++++H I+ + F KCD LD A K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
FD M R+ +WN+++ + GFL+ RLF +M + V G Q + L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 158 SLLKSVH---------SFG-----------IHIGVD-----------ADVSVCNTWISSY 186
+H SFG +++G DV + + I Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC + AE VF G+ ER +V+WNS++ ++L + MM +G D T
Sbjct: 193 SKCGSVACAEEVFSGMIER--NLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+ S++S+ AL +G +H+ + F D+ + N L+ MY+KC ++ AR +FD +
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG----AL 361
R VS T+M+SGYA+ + A +F M ++V+ ++I+G Q+G AL
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQR----NVVSWNALIAGYTQNGENEEAL 366
Query: 362 ELGK-------WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
L + W +Y LK ++ V N+LIDMY KCGSI D +F + E+ VSW
Sbjct: 367 RLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSW 426
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+I G A NG EAL +F +++ +P+ VT + VL AC+H G +E+G +
Sbjct: 427 NAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHY-FFSME 485
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+ G+ P DHY+CM DLLGR G L EA + +++MP+ DA +WG+LL ACK+H NIE+
Sbjct: 486 EHGLI--PLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEM 543
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G++ A L +++P ++ PYV ++N YA GRW V +R +M++ V K PG S +
Sbjct: 544 GKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVES 603
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ F +D+ H + Y VL L + Y
Sbjct: 604 RVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGY 637
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 207/450 (46%), Gaps = 39/450 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + ++L F +M + D N +F ACA L DL +H +
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC + CA ++F M R++ +WN+++ + Q G L
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSY 186
+F M G++ D VT+ + A L +H+ + D+ + N + Y
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMY 294
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC + A VF + +R VVS SMV+G S+ R M + +V +
Sbjct: 295 AKCSKVNEARRVFDRMS--IRNVVSETSMVSGYARA----ASVKAARFMFSKMTQRNVVS 348
Query: 247 VVSLLSSFV----CPEALVQGRLVHSHGI---HYGF----DLDVSVINTLISMYSKCGDI 295
+L++ + EAL RL+ I HY F D+ V N+LI MY KCG I
Sbjct: 349 WNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSI 408
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ +F+ + +R VSW A+I GYAQ G EAL++F M GE PD VT++ ++ C
Sbjct: 409 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCAC 468
Query: 356 GQSGALELGK-WFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIV 411
+G +E G+ +F + G LKD+ ++D+ + G + +A+ L A+P
Sbjct: 469 SHAGLVEEGRHYFFSMEEHGLIPLKDHY---TCMVDLLGRAGCLNEAKNLIEAMPVNPDA 525
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V W +++A C ++G +L+E+D
Sbjct: 526 VVWGSLLAACKVHGNIEMGKHAAEKLLEID 555
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/653 (30%), Positives = 325/653 (49%), Gaps = 50/653 (7%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
P L + I WN+ I + + K L LF QM ++++ + +T +ACA+L
Sbjct: 216 PLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAEL 275
Query: 68 SDLIYSQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAML 113
L + IH +K FV+ L+ ++++F+ + RD WN+M+
Sbjct: 276 GSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMI 335
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTV-MGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
+A G E + LF M+ G++ D TV + L+ A L KS+H+ I G+
Sbjct: 336 SAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGM 395
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV--VSWNSMVAGCTYGDKFDDSLN 230
D S+ N +S Y + + ++ + +F +R++ V +SWN+M+ +
Sbjct: 396 RIDASLGNALLSMYTELNCVESVQKIF----DRMKGVDIISWNTMILALARNTLRAQACE 451
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M + + + T++S+L++ L GR +H + + + +++ + L MY
Sbjct: 452 LFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYM 511
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
CGD +AR LF+G DR +SW AMI P+ VT+++
Sbjct: 512 NCGDEATARDLFEGCPDRDLISWNAMIXKAE---------------------PNSVTIIN 550
Query: 351 MISGCGQSGALELGKWFDNYACSGG--LKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
++S L G+ Y G L ++ + NA I MY++CGS+ A +F LP+
Sbjct: 551 VLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPK 610
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ ++SW MIAG +NG +A+ F Q++E RPN VTF++VL AC+H+GF+E G +
Sbjct: 611 RNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQL 670
Query: 469 --SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
S++Q + PEL HYSC+ DLL R G + EA +F+ SMPI+ DA +W LL +C
Sbjct: 671 FHSMVQ----DFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSC 726
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+ + + + + + L KLEP +A YV ++N YA G W V IRT +K ++K PG
Sbjct: 727 RAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPG 786
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
S + + F+A DR H +S+ Y L L RE Y L+W+ E
Sbjct: 787 ISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVFHEE 839
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 246/494 (49%), Gaps = 33/494 (6%)
Query: 1 MAVSSLPPRLNRIYRSSTINQ------WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNN 54
M +++ L R+ S T Q WNS I+ N L + QM+ + PNN
Sbjct: 1 MGMTTASMGLQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNN 60
Query: 55 LTFPFIAKACAKLSDLIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDE 100
T P + KACA + + + IH G V + KC ++ A +FD
Sbjct: 61 TTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDA 120
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M+ RDV WNAM+ G+ G E + L M ++ + T++ L A A L L
Sbjct: 121 MSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLG 180
Query: 161 KSVHSFGIHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG- 218
+ VH + + G+ D++ V I Y + D +++ L+F + +R +VSWN+M++G
Sbjct: 181 RGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMV--VRNIVSWNAMISGY 237
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFD 276
GD F +L + M+ + + D T+ L++ C E +L G+ +H I + F
Sbjct: 238 YDVGDYF-KALELFVQMLVDEVKFDCVTM--LVAVQACAELGSLKLGKQIHQLAIKFEFV 294
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
D+ ++N L++MYS G ++S+ LF+ + +R W +MIS YA G +EA+ LF M
Sbjct: 295 EDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRM 354
Query: 337 EAAGELPDLVTVLSMISGCGQ--SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
++ G D TV+ M+S C + SG L+ GK + G++ + + NAL+ MY++
Sbjct: 355 QSEGVKKDERTVVIMLSMCEELASGLLK-GKSLHAHVIKSGMRIDASLGNALLSMYTELN 413
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ +++F + ++SW TMI A N +A +LF ++ E +++PN T +++L
Sbjct: 414 CVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILA 473
Query: 455 ACTHTGFLEKGWAI 468
AC L+ G +I
Sbjct: 474 ACEDVTCLDFGRSI 487
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 319/646 (49%), Gaps = 36/646 (5%)
Query: 15 RSSTINQ--WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + + L FR M ++EP++ T + AC+ L
Sbjct: 71 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 130
Query: 70 LIYSQMIHGHIVK-------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
L+ + +H + ++ + + K +L + + RD+ +WN +L
Sbjct: 131 LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 190
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDAD 175
Q L L M L G++ D T+ + A H + L K +H++ + G +D +
Sbjct: 191 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 250
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + + Y C + VF G+ +R + WN+M+AG + + ++L + M
Sbjct: 251 SFVGSALVDMYCNCKQVLSGRRVFDGMFDR--KIGLWNAMIAGYSQNEHDKEALLLFIGM 308
Query: 236 MYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ G + TT+ ++ + V A + +H + G D D V NTL+ MYS+ G
Sbjct: 309 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 368
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME--------AAGEL---P 343
ID A +F + DR V+W MI+GY ++AL L M+ A + P
Sbjct: 369 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 428
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++F
Sbjct: 429 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 488
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+P+K V++W +I ++G EA+DL +M ++PN VTF++V AC+H+G ++
Sbjct: 489 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 548
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTL 522
+G I + D G+ P DHY+C+ DLLGR G++KEA + MP + AG W +L
Sbjct: 549 EGLRIFYVMKPDYGVE--PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 606
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L A +IH N+EIGE A L +LEP+ A+ YV +AN Y+ G WD +R MK V+
Sbjct: 607 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 666
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K PG S + F A D H +SE L+ L R+E Y
Sbjct: 667 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 712
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 241/513 (46%), Gaps = 38/513 (7%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK---------------SPFVKCDRLDCA 94
I+P+N FP + KA A L D+ + IH H+ K + + KC
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH- 153
YK+FD ++ R+ SWN+++ E L F M ++ T++ + A +
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 154 --AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+ L + K VH++G+ G + + + NT ++ Y K L ++++ R +V+
Sbjct: 126 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVT 182
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN++++ ++ ++L + R M+ G D T+ S+L + E L G+ +H++ +
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242
Query: 272 HYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
G D + V + L+ MY C + S R +FDG+ DR W AMI+GY+Q EAL
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302
Query: 331 RLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
LF M E+AG L + T+ ++ C +SGA + + GL + V N L+DM
Sbjct: 303 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 362
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-------- 441
YS+ G I A +F + ++ +V+W TMI G + +AL L H++ L+
Sbjct: 363 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 422
Query: 442 ---LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
L+PN +T + +L +C L KG I + + ++ S + D+ + G
Sbjct: 423 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN---NLATDVAVGSALVDMYAKCG 479
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
L+ + +P K + W ++ A +H N
Sbjct: 480 CLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 511
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 189/402 (47%), Gaps = 21/402 (5%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWISSYAKCD 190
M ++GI+ D L +A + + L K +H+ G D V+V NT ++ Y KC
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
D VF I E R VSWNS+++ +K++ +L +R M+ T+VS+
Sbjct: 61 DFGAVYKVFDRISE--RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 118
Query: 251 L---SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ S+ PE L+ G+ VH++G+ G +L+ +INTL++MY K G + S++VL
Sbjct: 119 VTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 177
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V+W ++S Q L EAL M G PD T+ S++ C L GK
Sbjct: 178 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 237
Query: 368 DNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
YA +G L +N V +AL+DMY C + R +F + ++ + W MIAG + N
Sbjct: 238 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 297
Query: 427 FVEALDLFHQLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL LF + E L N T V+ AC +G + AI G LD
Sbjct: 298 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI-------HGFVVKRGLD 350
Query: 486 H----YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + D+ R GK+ A+ M + D W T++
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 391
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 271/513 (52%), Gaps = 2/513 (0%)
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
SWN L A + L+ +M G D + + ++ + +H
Sbjct: 16 TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I G +A+ V IS Y KC ++ A VF + V +N++++G T K
Sbjct: 76 VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
D+ +R M G +D T++ L+ PE L GR +H + G +V+V+N+ I
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
+MY KCG ++S R LFD + + ++W A+ISGY+Q G + L LF M+++G PD
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++S++S C GA ++G+ + G NV + NALI MY++CG++ AR +F +
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
P K +VSWT MI ++G L LF +++ +RP+ F+ VL AC+H+G +KG
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG- 374
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + + + P +HYSC+ DLLGR G+L EA++F+ SMP++ D +WG LL AC
Sbjct: 375 -LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGAC 433
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
KIH N+++ E + + EP + YV M+N Y+ +G+ IR MM+ +K PG
Sbjct: 434 KIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 493
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
S GK F A DR H ++E + +LD L
Sbjct: 494 YSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDEL 526
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 222/447 (49%), Gaps = 22/447 (4%)
Query: 15 RSSTI--NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
R+S + WN ++RE ++ +++ L+R M ++ P+ +FPFI K+CA LS +
Sbjct: 9 RNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVS 68
Query: 73 SQMIHGHIVK-----SPFV---------KCDRLDCAYKIFDE--MAVRDVASWNAMLVGF 116
Q +H H+++ PFV KC ++ A K+F+E + + +NA++ G+
Sbjct: 69 GQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGY 128
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
+ + +F M+ G+ D VT++GL ++L L +S+H + G ++V
Sbjct: 129 TANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEV 188
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+V N++I+ Y KC ++ +F E ++ +++WN++++G + D L + M
Sbjct: 189 AVLNSFITMYMKCGSVESGRRLF--DEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK 246
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+G D T+VS+LSS A G+ V GF +V + N LISMY++CG++
Sbjct: 247 SSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLA 306
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR +FD + ++ VSWTAMI Y G + L LF M G PD + ++S C
Sbjct: 307 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACS 366
Query: 357 QSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSW 414
SG + G + F L+ + L+D+ + G + +A E ++P E W
Sbjct: 367 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVW 426
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELD 441
++ C ++ A F +++E +
Sbjct: 427 GALLGACKIHKNVDMAELAFAKVIEFE 453
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 186/586 (31%), Positives = 298/586 (50%), Gaps = 22/586 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N I+ + K + + + +F +M D P+N T+PF+ KAC++L + Y +++HG
Sbjct: 89 YNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLT 148
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ S F + C ++ A K+FD M + V SWN M+ G+ + GF L
Sbjct: 149 LVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTAL 208
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M G++ D +V+ + A + K L + + VH + V V N + Y
Sbjct: 209 VVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMY 267
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC + A LVF + ER VVSW SM+ G +L+ ++ M G R + T
Sbjct: 268 AKCGSMDEARLVFDNMVER--DVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVT 325
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +L + L GR +H + +V+V +LI MY+KC + + +F
Sbjct: 326 IALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTS 385
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ V W A++SG EA+ LF M G + T S++ G L+
Sbjct: 386 RKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNN 445
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI--VVSWTTMIAGCALN 424
++Y G N+ V +LID+YSKCGS+ A ++F +P + + W+ +IAG ++
Sbjct: 446 INSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMH 505
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G A+ LF Q+++ ++PN VTF +VLQ+C+H G ++ G + + ++ K P
Sbjct: 506 GHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDG--LYLFKFMLKDHQTIPND 563
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
DHY+CM DLLGR G++ EA D +++MP +WG LL AC +H N+E+GE A LF+
Sbjct: 564 DHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFE 623
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
LEP + YV +A YA GRW+ N+R M ++K P SL
Sbjct: 624 LEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 669
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/513 (25%), Positives = 233/513 (45%), Gaps = 31/513 (6%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS-------------PFVKCDRLDCAYK 96
+ P + + K L ++ +H H++ S + C + A K
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNARK 76
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ---ADFVTVMGLTQAAIH 153
+FDE+ R +N M+ + G +++F + ++G + D T + +A
Sbjct: 77 LFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVF--LEMLGSKDCCPDNYTYPFVIKACSE 134
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + +H + + + V N+ ++ Y C +++ A VF ++E+ +VVSWN
Sbjct: 135 LLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEK--SVVSWN 192
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+M+ G + +L + M+ +G +D +VVS+L + + L GR VH G+
Sbjct: 193 TMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVH--GLVE 250
Query: 274 GFDLDVSVI-NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
L ++ N L+ MY+KCG +D AR++FD + +R VSWT+MI+GY GD AL L
Sbjct: 251 EKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSL 310
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+ G P+ VT+ ++ C L+ G+ + L V V +LIDMY+K
Sbjct: 311 FKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAK 370
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
C +G + +F K V W +++GC N EA+ LF +++ + N T ++
Sbjct: 371 CNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSL 430
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
L A G L ++ I + + + + D+ + G L+ A ++P+
Sbjct: 431 LPA---YGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPV 487
Query: 513 K-SDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
D +W ++ +H + E A LFK
Sbjct: 488 DVQDIFVWSIIIAGYGMHGHGE----TAVSLFK 516
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 202/413 (48%), Gaps = 26/413 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ ++ WN+ I A+ L++F QM + +E + + + AC L +L +
Sbjct: 184 KEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGR 243
Query: 75 MIHG---------HIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG IV + V KC +D A +FD M RDV SW +M+ G+ G
Sbjct: 244 RVHGLVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGD 303
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
++ L LF M++ G++ + VT+ + A +L + +H + + + ++V+V +
Sbjct: 304 AKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETS 363
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I YAKC+ L ++ VF + V WN++++GC + +++ ++ M+ G
Sbjct: 364 LIDMYAKCNCLGLSFSVFTRTSR--KKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVE 421
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
++ T SLL ++ L ++S+ + GF ++ V +LI +YSKCG ++SA +
Sbjct: 422 INAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKI 481
Query: 302 FDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F+ I + W+ +I+GY G + A+ LF M +G P+ VT S++ C +G
Sbjct: 482 FNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAG 541
Query: 360 ALELGKWFDNYACSGGLKDNVMVCN-----ALIDMYSKCGSIGDARELFYALP 407
++ G + + LKD+ + N ++D+ + G + +A +L +P
Sbjct: 542 MVDDGLYLFKFM----LKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMP 590
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/437 (37%), Positives = 248/437 (56%), Gaps = 5/437 (1%)
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+D + + N ++ YAKC L A +F E + +V+W +++AG + ++ D+L
Sbjct: 119 LDNHLVLQNIIVNMYAKCGCLDDARRMF--DEMPTKDMVTWTALIAGFSQNNRPRDALLL 176
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ M+ G + + T+ SLL + L G +H+ + YG+ V V + L+ MY++
Sbjct: 177 FPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYAR 236
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG +D+A++ FDG+ ++ VSW A+ISG+A+KG+ + AL L + M+ P T S+
Sbjct: 237 CGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
S C GALE GKW + GLK + N L+DMY+K GSI DA+ +F L + V
Sbjct: 297 FSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
VSW TM+ GCA +G E LD F Q++ + + PN ++FL VL AC+H+G L++G +
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
K P++ HY DLLGR G L A F++ MPI+ A +WG LL AC++H N
Sbjct: 417 M---KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+E+G Y A F+L+PH + P + ++N YA GRW VA +R MMK + VKK P S
Sbjct: 474 MELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVE 533
Query: 592 INGKTCTFTAEDRYHAE 608
I F A D H +
Sbjct: 534 IENAVHLFVANDETHPQ 550
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 195/413 (47%), Gaps = 18/413 (4%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV---------------KCD 89
+++ + P+ + + K C +L + +++H H+V S F+ KC
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
LD A ++FDEM +D+ +W A++ GF+Q + L LF M +G+Q + T+ L +
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A+ L +H+F + G + V V + + YA+C + A+L F G+ ++
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPT--KSE 255
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWN++++G + + +L+ M F+ T S+ S+ AL QG+ VH+H
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAH 315
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I G L + NTL+ MY+K G ID A+ +FD + VSW M++G AQ G E
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L F M G P+ ++ L +++ C SG L+ G ++ ++ +V +D+
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDL 435
Query: 390 YSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ G + A +P E W ++ C ++ + + ELD
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELD 488
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 138/338 (40%), Gaps = 24/338 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N LLLF QM + ++PN+ T + KA L +H +
Sbjct: 157 WTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCL 216
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + +C +D A FD M + SWNA++ G A+ G E+ L
Sbjct: 217 KYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALH 276
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L + M+ Q T + A L K VH+ I G+ + NT + YA
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYA 336
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
K + A+ VF +RL VVSWN+M+ GC ++L+ + M+ G +
Sbjct: 337 KAGSIDDAKRVF----DRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDG 304
+ + +L++ L +G Y + DV T + + + G +D A R + +
Sbjct: 393 SFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM 452
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+ T W A++ +++ + +A E A EL
Sbjct: 453 PIEPTAAVWGALLGACRMHKNMELGV---YAAERAFEL 487
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 311/608 (51%), Gaps = 31/608 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE----PNNLTFPFIAKACAKLSDLIYSQMIH 77
WNS IR + + ++ LL +M + + + P+ T + CA+ ++ + +H
Sbjct: 611 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 670
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G VK + KC + A IF ++V SWN M+ GF+ G
Sbjct: 671 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 730
Query: 124 NVLRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ M G ++AD VT++ H L LK +H + + + V N
Sbjct: 731 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 790
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+++SYAKC L A+ VF GI R +TV SWN+++ G + SL+ + M +G
Sbjct: 791 FVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 848
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D TV SLLS+ ++L G+ VH I + D+ V +++S+Y CG++ + + L
Sbjct: 849 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 908
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + D++ VSW +I+GY Q G D AL +F M G ++++ + C +L
Sbjct: 909 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 968
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
LG+ YA L+D+ + +LIDMY+K GSI + ++F L EK SW MI G
Sbjct: 969 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 1028
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK---GI 478
++G EA+ LF ++ P+ +TFL VL AC H+G + +G ++Y D+
Sbjct: 1029 GIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG-----LRYLDQMKSSF 1083
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
P L HY+C+ D+LGR G+L +AL V + M ++D GIW +LL +C+IH N+E+GE
Sbjct: 1084 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 1143
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA LF+LEP YV ++N YA G+W+ V +R M ++K G S +N K
Sbjct: 1144 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 1203
Query: 598 TFTAEDRY 605
+F +R+
Sbjct: 1204 SFVVGERF 1211
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/542 (26%), Positives = 253/542 (46%), Gaps = 39/542 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLL--LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
RS + QWN+ I + ++NE + +L + D+ P++ T+P + KACA +SD+
Sbjct: 502 RSKNLFQWNAVI-SSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 560
Query: 73 SQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+HG +VK+ V+ + A ++FD M R++ SWN+M+ F+
Sbjct: 561 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 620
Query: 119 MGFLENVLRLFYNMRLV----GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GF E L M D T++ + + + L K VH + + + +D
Sbjct: 621 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 680
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
++ + N + Y+KC + A+++F + VVSWN+MV G + + + R
Sbjct: 681 ELVLNNALMDMYSKCGCITNAQMIF--KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 738
Query: 235 MMYNGFRLDVTTVVSLLSSFVC--PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M+ G + V L + VC L + +H + + F + V N ++ Y+KC
Sbjct: 739 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 798
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + A+ +F GI +T SW A+I G+AQ D +L M+ +G LPD TV S++
Sbjct: 799 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 858
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S C + +L LGK + L+ ++ V +++ +Y CG + + LF A+ +K +V
Sbjct: 859 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 918
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-----WA 467
SW T+I G NG AL +F Q++ ++ ++ + V AC+ L G +A
Sbjct: 919 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 978
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ + DD I+ + + D+ + G + ++ + KS A W ++
Sbjct: 979 LKHLLEDDAFIACS--------LIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYG 1029
Query: 528 IH 529
IH
Sbjct: 1030 IH 1031
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 218/464 (46%), Gaps = 22/464 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSD 69
++ + + WN+ + + + H T + RQM D++ + +T C S
Sbjct: 706 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 765
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +H + +K FV KC L A ++F + + V SWNA++ G
Sbjct: 766 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 825
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
AQ L M++ G+ D TV L A K L L K VH F I ++ D
Sbjct: 826 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 885
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V + +S Y C +L + +F +E++ ++VSWN+++ G D +L +R M
Sbjct: 886 LFVYLSVLSLYIHCGELCTVQALFDAMEDK--SLVSWNTVITGYLQNGFPDRALGVFRQM 943
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G +L +++ + + +L GR H++ + + + D + +LI MY+K G I
Sbjct: 944 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 1003
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ +F+G+ +++ SW AMI GY G EA++LF M+ G PD +T L +++ C
Sbjct: 1004 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 1063
Query: 356 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA-RELFYALPEKIVVS 413
SG + G ++ D S GLK N+ +IDM + G + A R + + E+ V
Sbjct: 1064 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 1123
Query: 414 -WTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQA 455
W ++++ C ++ + +L EL+ +P L+ L A
Sbjct: 1124 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 1167
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 204/448 (45%), Gaps = 23/448 (5%)
Query: 26 IREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA-KLSDLIYSQMIHGHIVKSP 84
+REA+ LLL K+ DIE ++ + + D++ +++I +
Sbjct: 438 VREALG-------LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRII------TM 484
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVT 143
+ C D + +FD + +++ WNA++ +++ + VL F M + D T
Sbjct: 485 YAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFT 544
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ +A + + +VH + G+ DV V N +S Y + A +F +
Sbjct: 545 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 604
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNG---FRLDVTTVVSLLSSFVCPEA 259
E R +VSWNSM+ + ++S MM NG F DV T+V++L
Sbjct: 605 E--RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 662
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+ G+ VH + D ++ + N L+ MYSKCG I +A+++F ++ VSW M+ G
Sbjct: 663 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 722
Query: 320 YAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
++ +GD + M A GE D VT+L+ + C L K Y+
Sbjct: 723 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 782
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N +V NA + Y+KCGS+ A+ +F+ + K V SW +I G A + + +LD Q+
Sbjct: 783 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 842
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG 465
L P+ T ++L AC+ L G
Sbjct: 843 KISGLLPDSFTVCSLLSACSKLKSLRLG 870
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LP 343
+I+MY+ CG D +R +FD + + W A+IS Y++ DE L F M + + LP
Sbjct: 481 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 540
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T +I C + +G GL ++V V NAL+ Y G + DA +LF
Sbjct: 541 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 600
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD----LRPNRVTFLAVLQACTHT 459
+PE+ +VSW +MI + NG E+ L ++ME + P+ T + VL C
Sbjct: 601 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 660
Query: 460 -----GFLEKGWAISIIQYDDKGISYNPELDHYS 488
G GWA+ ++ D + + N +D YS
Sbjct: 661 REIGLGKGVHGWAVK-LRLDKELVLNNALMDMYS 693
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS------MISGCGQSGALELGKWFDNY 370
IS + + GDLD++ R E +L ++ G+ +E+G+
Sbjct: 405 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 464
Query: 371 AC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
S L+++ ++C +I MY+ CGS D+R +F AL K + W +I+ + N + E
Sbjct: 465 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 524
Query: 430 ALDLFHQLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
L+ F +++ DL P+ T+ V++AC + G A+
Sbjct: 525 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 288/551 (52%), Gaps = 14/551 (2%)
Query: 85 FVKCDRLDCAYKIF-DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+ KC++++ A IF D +V ++NA++ GF GF E + MR G+ D T
Sbjct: 2 YSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFT 61
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+A + + K +H G++ DV + + ++ Y K ++ A++ F E
Sbjct: 62 FPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAF--EE 116
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+R VV WN+MV G +F+ L +R M TV +LS F L G
Sbjct: 117 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG 176
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R++H + G+D V+V N+LI MY KC I+ A +F+ + ++ SW ++ S + Q
Sbjct: 177 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQC 236
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------ 377
GD D LRL M AG PDLVTV +++ C AL G+ Y GL
Sbjct: 237 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 296
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
D+V++ NA+IDMY+KCGS+ DA +F + K V SW MI G ++G EAL++F ++
Sbjct: 297 DDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRM 356
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
E+ L+P+ VTF+ VL AC+H GF+ +G + Q K P ++HY+C+ D+LGR
Sbjct: 357 CEVQLKPDEVTFVGVLSACSHAGFVSQGRNF-LAQMKSK-YDVAPTIEHYTCVIDMLGRA 414
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G+L EA + +MPI+++ +W LL AC++H + + E A +F+LEP YV M+
Sbjct: 415 GQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMS 474
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N Y GR++ V +R M++ V+K PG S + F + DR H E+ Y L+
Sbjct: 475 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLN 534
Query: 618 CLALHSREEAY 628
L E Y
Sbjct: 535 SLTARLCEHGY 545
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 207/442 (46%), Gaps = 27/442 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I + + +++M+ + P+ TFP KAC D++ + IHG +
Sbjct: 27 FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL---DVLEIKKIHGLLF 83
Query: 82 K-----SPFVKCDRLDCAYKI---------FDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F+ ++C K F+E+ +RDV WNAM+ G+AQ+G E VL
Sbjct: 84 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 143
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + TV G+ L+ + +H F + +G D+ V+V N+ I Y
Sbjct: 144 TFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 203
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F + E + + SWNS+ + D +L M+ G + D+ TV
Sbjct: 204 KCKCIEDALEIFEMMRE--KDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 261
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGF-----DL-DVSVINTLISMYSKCGDIDSARVL 301
++L + AL+ GR +H + I G D+ DV + N +I MY+KCG + A ++
Sbjct: 262 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 321
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + ++ SW MI GY G +EAL +F M PD VT + ++S C +G +
Sbjct: 322 FERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 381
Query: 362 ELGKWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
G+ F + + +IDM + G + +A EL +P E V W ++A
Sbjct: 382 SQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 441
Query: 420 GCALNGEFVEALDLFHQLMELD 441
C L+ V A ++ EL+
Sbjct: 442 ACRLHKHAVLAEVAAQRVFELE 463
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 299/586 (51%), Gaps = 22/586 (3%)
Query: 62 KACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVA 107
K AKL L + +H H++K +VKC + K+FDEM +++V
Sbjct: 81 KISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVV 140
Query: 108 SWNAMLVGFAQMGFLENVLRL----FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
SWN ++ G + ++RL F M L + + +T+ GL +A+I + + + +
Sbjct: 141 SWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQL 200
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H F + G D++ V + + SYAK + A+ F + R +V WN MV+
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSR--DLVLWNVMVSCYALNG 258
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
+ ++ M G + D T S+++S + G+ VH I FDLDV V +
Sbjct: 259 VQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVAS 318
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MYSK +I+ AR FDG+ + VSWT MI GY Q GD EA+RL M P
Sbjct: 319 ALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYP 378
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D + + S++S CG A Y G + + + NAL+ YSKCGSIG A + F
Sbjct: 379 DELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSF 438
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
++ E ++SWT+++ A +G E +++F +++ ++RP++V FL VL AC H GF+
Sbjct: 439 SSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVL 498
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+G + + I P+ +HY+C+ DLLGR G L EA++ + SMP++ + G L
Sbjct: 499 EGLHYFNLMINVYQIM--PDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFL 556
Query: 524 CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
ACK+H N+ + + + LF +EP+ A Y M+N YA G W VA +R +M+ K
Sbjct: 557 GACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFK 616
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
PG S I G+ TF + D+ H + Y +LD L E+ S
Sbjct: 617 VPGCSWMEIAGEVHTFVSRDKTHPRAVQVYGMLDLLVRLMEEDDVS 662
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 25/408 (6%)
Query: 21 QWNSQIREAVNKNEAHKTLLL----FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
WN+ I V N + L FRQM + PN +T + +A +L+D+ + +
Sbjct: 141 SWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQL 200
Query: 77 HGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H I+KS F K +D A FDE++ RD+ WN M+ +A G
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQ 260
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+F MRL G++ D T + + L K VH I + D DV V +
Sbjct: 261 GKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASAL 320
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD--DSLNFYRHMMYNGF 240
+ Y+K ++++ A F G+ ++ +VSW +M+ G YG D +++ + M+
Sbjct: 321 VDMYSKNENIEDARKAFDGM--IVKNIVSWTTMIVG--YGQHGDGKEAMRLLQEMIRVYT 376
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D + S+LSS A + VH++ + GF+ +S+ N L+S YSKCG I SA
Sbjct: 377 YPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQ 436
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG- 359
F + + +SWT+++ YA G E + +F M + PD V L ++S C G
Sbjct: 437 SFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGF 496
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
LE +F+ + + +ID+ + G + +A L ++P
Sbjct: 497 VLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMP 544
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 295/577 (51%), Gaps = 13/577 (2%)
Query: 62 KACAKLSDLIYSQMIHGHIVKS---PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+A L I +H H+ S + + AY +F +V WN ++ F+
Sbjct: 18 EALKSLHASILKSHLHPHLCTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSN 77
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
N LRL+ M +GIQA T L +A L H+ + G ++DV V
Sbjct: 78 TPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFV 137
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N+ ++ Y + + VF + ER VVSW+SMV + ++++ L + M+
Sbjct: 138 ANSLMAMYGRFGCFDFSRQVFERMPER--NVVSWSSMVGAYAHNGRYEEGLLLFWRMLNE 195
Query: 239 GFRLDVTTVVSLLSSFVCP-EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G + ++V+ ++ EA R+V I G D D SV N + MY++CG ID
Sbjct: 196 GIAPNRGSIVNAMACIHREHEADDFCRVV----IDNGLDSDQSVQNAAMGMYARCGRIDV 251
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
AR F GI D+ V+WT+MI Y Q AL LF M+ G +PD VT+LS+I
Sbjct: 252 ARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSN 311
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+ +L ++ K+++ + A+ID+Y KCG++ AR+ F + + ++SW+TM
Sbjct: 312 LASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTM 371
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+G ++G EAL LF Q M+ ++P+ + F+ VL AC+H G + +GW D G
Sbjct: 372 ISGYGMHGHGREALCLFDQ-MKASIKPDHIAFVMVLSACSHGGLIAEGWECFKAMNRDFG 430
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
++ P +HY+CM DLLGR G+L EA F++ MPI DAG+WG LL AC+IH N+E E
Sbjct: 431 VT--PRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRIHSNLETAET 488
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A LF L+ + Y+ ++N YA G+ +IR +MK V+K G ++ I K
Sbjct: 489 AARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVGHTIIEIKNKVY 548
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
TF A D + +++L Y L L +E Y L +
Sbjct: 549 TFVAGDTSNPQTDLIYSELRKLMDRIQEAGYVPDLSF 585
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 206/459 (44%), Gaps = 23/459 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
SS + WN IR N + +L L+ +M Q I+ N TFPF+ KAC L+D
Sbjct: 62 SSNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGAR 121
Query: 76 IHGHIV-----------KSPFVKCDRLDC---AYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H H+V S R C + ++F+ M R+V SW++M+ +A G
Sbjct: 122 AHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGR 181
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E L LF+ M GI + +++ A IH +H + I G+D+D SV N
Sbjct: 182 YEEGLLLFWRMLNEGIAPNRGSIVN-AMACIHREHEA--DDFCRVVIDNGLDSDQSVQNA 238
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YA+C + +A F GI + + +V+W SM+ D ++L ++ M G
Sbjct: 239 AMGMYARCGRIDVARRFFYGILD--KDLVAWTSMIEAYVQADLPINALELFKQMKLLGIV 296
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T++SL+ + + R VH F +++ +I +Y KCG+++ AR
Sbjct: 297 PDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKC 356
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + R +SW+ MISGY G EAL LF M+A+ + PD + + ++S C G +
Sbjct: 357 FDRMSARNLISWSTMISGYGMHGHGREALCLFDQMKASIK-PDHIAFVMVLSACSHGGLI 415
Query: 362 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
G + F G+ ++D+ + G + +A+ +P W ++
Sbjct: 416 AEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLG 475
Query: 420 GCALNGEFVEALDLFHQLMELDLR-PNRVTFLAVLQACT 457
C ++ A L LD P R L+ + A +
Sbjct: 476 ACRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASS 514
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 292/559 (52%), Gaps = 31/559 (5%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD++ D + + ++++ LR F +M ++ T+ + ++
Sbjct: 49 ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCAS 108
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI----------- 202
+ + K VHS I G + V N I+ YAK +DL AEL+F GI
Sbjct: 109 LLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168
Query: 203 ------------------EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+ R R++VSWN+M++ + ++ M +
Sbjct: 169 ISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNE 228
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+ ++LS L G + + ++ V ++ MY KCG +D R++FD
Sbjct: 229 ITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH 288
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R V+W+AMI+GYAQ G +EAL LF M++A P+ VT++S++S C Q G++E G
Sbjct: 289 MARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG 348
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ +Y S GL NV V +AL+ MYSKCG+I AR++F LP++ V+W +MI G A+N
Sbjct: 349 ERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAIN 408
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G +A+ L++++ E++++PN +TF+ ++ ACTH G +E G D IS P +
Sbjct: 409 GFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNIS--PNI 466
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+H++C+ DL R G+L +A +F+ M ++ + IWGTLL A +IHLN+E+ E L +
Sbjct: 467 EHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLE 526
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP ++ YV ++N YA GRW +R +MK +V+K S + + F D
Sbjct: 527 LEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDT 586
Query: 605 YHAESELTYPVLDCLALHS 623
H S+ Y +D LAL S
Sbjct: 587 SHPRSDEVYSTIDGLALLS 605
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 203/458 (44%), Gaps = 56/458 (12%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK---------- 82
NEA +T F M QN++ T P I K+CA L + + +H +++
Sbjct: 78 NEALRT---FVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQ 134
Query: 83 -----------------------------------SPFVKCDRLDCAYKIFDEMAVRDVA 107
S + + + A ++FD+M R +
Sbjct: 135 NALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIV 194
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SWNAM+ +AQ G +F M+ + + +T+ + L + +
Sbjct: 195 SWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLN 254
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+ + +++ V + Y KC + LVF + R VV+W++M+AG + ++
Sbjct: 255 DNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMAR--RDVVTWSAMIAGYAQNGRSNE 312
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+L + +M + + T+VS+LS+ ++ G + S+ G +V V + L+
Sbjct: 313 ALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLG 372
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSKCG+I AR +FD + R V+W +MI G A G ++A+ L+ M+ P+ +T
Sbjct: 373 MYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNIT 432
Query: 348 VLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
+ +++ C +G +ELG ++F + + N+ ++D++ + G + DA E +
Sbjct: 433 FVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRM 492
Query: 407 P-EKIVVSWTTMIAGCA--LNGEFVEALDLFHQLMELD 441
E VV W T+++ LN E E +L+EL+
Sbjct: 493 EVEPNVVIWGTLLSASRIHLNVELAELAG--KKLLELE 528
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL---- 70
R +I WN+ I + HK ++F++M+ EPN +T + CAKL DL
Sbjct: 189 RDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGL 248
Query: 71 ----------IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ S MI + +VKC +D +FD MA RDV +W+AM+ G+AQ G
Sbjct: 249 RIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNG 308
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L LF NM+ I+ + VT++ + A + + + S+ G+ ++V V +
Sbjct: 309 RSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVAS 368
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ Y+KC ++ A +F + + R V+WNSM+ G +D++ Y M
Sbjct: 369 ALLGMYSKCGNIIKARQIFDKLPQ--RDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEV 426
Query: 241 RLDVTTVVSLLSS 253
+ + T V L+++
Sbjct: 427 KPNNITFVGLMTA 439
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I +++ L LF MK I+PN++T + ACA+L + + I ++
Sbjct: 297 WSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVE 356
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ KC + A +IFD++ RD +WN+M++G A GF E+ +
Sbjct: 357 SRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIA 416
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
L+ M+ + ++ + +T +GL A HA H+ L
Sbjct: 417 LYNRMKEIEVKPNNITFVGLMTACTHAGHVEL 448
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 119/308 (38%), Gaps = 64/308 (20%)
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
I AR +FD I + + I+ Y++ +EALR F +M T+ +
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD---------------- 398
C A+++GK + G +V NALI+ Y+K +G
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 399 ---------------ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
ARELF + ++ +VSW MI+ A NG++ + +F ++ +
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP--------------------- 482
PN +T VL C G LE G I + D+K + N
Sbjct: 226 PNEITLATVLSICAKLGDLEMGLRIKKLN-DNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 284
Query: 483 ELDH--------YSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHLN 531
DH +S M + G+ EAL+ ++M IK + ++L AC +
Sbjct: 285 VFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGS 344
Query: 532 IEIGEYVA 539
+E GE +
Sbjct: 345 VETGERIG 352
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 272/508 (53%), Gaps = 39/508 (7%)
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
F++ L +K +S L +H+ G+D + SYA L + +F
Sbjct: 27 FISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFG 86
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ +V W +++ G + +LNFY M+ G + T S+L +CP +
Sbjct: 87 RTQNP--SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK--LCP--I 140
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI------------------------- 295
G+ +HS + GFD D+ V L+ +Y++ GD+
Sbjct: 141 EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCY 200
Query: 296 ------DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
D+ARVLFDG+ +R V W MI GY Q G +EAL LF M A P+ VTVL
Sbjct: 201 AKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVL 260
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S++S CGQ GALE G+W +Y + G++ NV V AL+DMYSKCGS+ DAR +F + +K
Sbjct: 261 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 320
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
VV+W +MI G A++G EAL LF + + L P +TF+ +L AC H+G++ +GW I
Sbjct: 321 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 380
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
D+ GI P+++HY CM +LLGR G +++A + V++M I+ D +WGTLL AC++H
Sbjct: 381 NKMKDEYGIE--PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLH 438
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
I +GE + L ++ Y+ ++N YA G WDGVA +RTMMK + VKK PG S
Sbjct: 439 GKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSS 498
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLD 617
+N K F A H + + Y +L+
Sbjct: 499 IEVNNKVHEFLAGGLNHPKRKEIYMMLE 526
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 182/396 (45%), Gaps = 41/396 (10%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
++ + RLD + +F V W A++ G A G E L + M G++ +
Sbjct: 68 LQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPN 127
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV---------------------- 178
T + + + K++HS + +G D+D+ V
Sbjct: 128 AFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFD 183
Query: 179 ---------CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
++ YAK +L A ++F G+EE R V WN M+ G T +++L
Sbjct: 184 TMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEE--RDGVCWNVMIDGYTQNGMPNEAL 241
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+R M+ + + TV+S+LS+ AL GR VHS+ + G +V V L+ MY
Sbjct: 242 VLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMY 301
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
SKCG ++ AR++FD I D+ V+W +MI GYA G EAL+LF +M G P +T +
Sbjct: 302 SKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFI 361
Query: 350 SMISGCGQSGALELGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
++S CG SG + G W F+ G++ + ++++ + G + A EL +
Sbjct: 362 GILSACGHSGWVTEG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN 420
Query: 408 -EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
E V W T++ C L+G+ + L++ +L
Sbjct: 421 IEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNL 456
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 126/319 (39%), Gaps = 44/319 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC----------------- 64
W + I + + L + QM +EPN TF I K C
Sbjct: 96 WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGF 155
Query: 65 --------------AKLSDLIYSQMIHGHIVKSPFV----------KCDRLDCAYKIFDE 100
A+ D++ +Q + + + V K LD A +FD
Sbjct: 156 DSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDG 215
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M RD WN M+ G+ Q G L LF M + + VTV+ + A L
Sbjct: 216 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 275
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+ VHS+ + G+ +V V + Y+KC L+ A LVF I++ + VV+WNSM+ G
Sbjct: 276 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD--KDVVAWNSMIVGYA 333
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDV 279
++L ++ M G T + +LS+ + +G + + YG + +
Sbjct: 334 MHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKI 393
Query: 280 SVINTLISMYSKCGDIDSA 298
++++ + G ++ A
Sbjct: 394 EHYGCMVNLLGRAGHVEQA 412
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 288/563 (51%), Gaps = 38/563 (6%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +F+ ++ WN ML G A L + L ++ M G + T L
Sbjct: 31 DGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLL 90
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVD-------------------------------ADVS 177
++ +K + +H+ + +G + DV
Sbjct: 91 KSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVV 150
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
C I+ YA D++ A VF I ER VVSWN+M+ G ++++L ++ MM
Sbjct: 151 SCTALITGYASRGDVRSARKVFDXITER--DVVSWNAMITGYVENCGYEEALELFKEMMR 208
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH-GIHYGFDLDVSVINTLISMYSKCGDID 296
R D T+VS+LS+ ++ GR +H+ H+GF + ++N I +YSKCGD++
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A LF+G+ + VSW +I GY EAL LF M +GE P+ VT+LS++ C
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 328
Query: 357 QSGALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
GA+++G+W Y G+ + + +LIDMY+KCG I A ++F ++ K + SW
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSW 388
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
MI G A++G A DLF ++ + + P+ +T + +L AC+H+G L+ G I
Sbjct: 389 NAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ 448
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D I+ P+L+HY CM DLLG G KEA + + MP++ D IW +LL ACK+H N+E+
Sbjct: 449 DYNIT--PKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLEL 506
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
E A L ++EP ++ YV ++N YA GRW+ VA IR ++ +KK PG S I+
Sbjct: 507 AESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDS 566
Query: 595 KTCTFTAEDRYHAESELTYPVLD 617
F D+ H +S Y +L+
Sbjct: 567 VVHEFIIGDKLHPQSREIYRMLE 589
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 223/474 (47%), Gaps = 60/474 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ +R + ++ L ++ +M PN TFPF+ K+CAK + IH ++
Sbjct: 51 WNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM 110
Query: 82 K--------------SPFVKCDRLD-------------------------------CAYK 96
K S + + RL+ A K
Sbjct: 111 KLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARK 170
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD + RDV SWNAM+ G+ + E L LF M ++ D T++ + A +
Sbjct: 171 VFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGS 230
Query: 157 LSLLKSVHSF-GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ L + +H+ H G + + + N +I Y+KC D+++A +F G+ + VVSWN++
Sbjct: 231 IELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLS--CKDVVSWNTL 288
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH------ 269
+ G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H +
Sbjct: 289 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK 348
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
G+ G L S LI MY+KCGDI++A +F+ + ++ SW AMI G+A G + A
Sbjct: 349 GVTNGSALRTS----LIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAA 404
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALID 388
LF M G PD +T++ ++S C SG L+LG+ F + + + +ID
Sbjct: 405 FDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMID 464
Query: 389 MYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ G +A E+ + +P E V W +++ C ++G A +LME++
Sbjct: 465 LLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIE 518
>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 196/628 (31%), Positives = 312/628 (49%), Gaps = 73/628 (11%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC---AKLSDLIYS-- 73
I+ ++S + ++ + FR++ +++++P++LTF + KA A S +I S
Sbjct: 113 ISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSPN 172
Query: 74 -----QMIHGHIVKSPFVKC-----------DRLDCAY---KIFDEMAVRDVASWNAMLV 114
I H+ KS F + +L C Y +F+EM RDV SWNA++
Sbjct: 173 TKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALIC 232
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G+++ G+ + L +F M G T++GL + + K++H FGI G+D
Sbjct: 233 GYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDL 292
Query: 175 DVSVCNTWISSYAK---------------------------------------------C 189
D V N S YAK C
Sbjct: 293 DCRVKNALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAGC 352
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
+++ A L++ + +R +VS +M++G + + M+ + D +VS
Sbjct: 353 GNIESAGLLYNLMPQR--NLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVS 410
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
+L F P + G +H++G+ G D V+N LISMYSK GDI++ LF + ++
Sbjct: 411 ILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQ 470
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
+SW ++IS Q G +A+ LF M G PD +T+ S+++GC + G L+ G+ N
Sbjct: 471 LISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHN 530
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
Y L + AL+DMY KCG + A +F ++ E + +W TMI+G L+G
Sbjct: 531 YVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHR 590
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
AL + ++ E L+P+R+TFL VL ACTH G + +G +D G+ P L H +C
Sbjct: 591 ALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMI--PGLQHNAC 648
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
M DLL R G L+EA+ FV++M ++ D+ IWG LL +C IH +++GE +A L L+ +S
Sbjct: 649 MVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYS 708
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMK 577
YV M+N YA GRWD VA +R MMK
Sbjct: 709 GGLYVLMSNLYASKGRWDDVARVRKMMK 736
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 25/224 (11%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G V + A +D Y K G I A+ LF +P + VVSW +I G + NG +AL++F
Sbjct: 188 GFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVF 247
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD--------- 485
Q++ P + T + ++ +C + +G AI GI +LD
Sbjct: 248 VQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAI-----HGFGIKSGLDLDCRVKNALTS 302
Query: 486 -----HYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
++ M G+ G EA L F Q + + ++C+ NIE A
Sbjct: 303 MYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAGCGNIE----SA 358
Query: 540 YCLFKLEPH-SAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L+ L P + M + YA G V T M + ++K
Sbjct: 359 GLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMK 402
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 204/660 (30%), Positives = 321/660 (48%), Gaps = 77/660 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I N A++ L LF +M + EPN++T +ACA +L + IH
Sbjct: 240 WSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH---- 295
Query: 82 KSPFVKCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
++AV +DV SW A+L G+AQ G + +F NM GIQ D
Sbjct: 296 ------------------KIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPD 337
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
V V+ + A+ +H + + G +++V V + I Y+KC L A +F
Sbjct: 338 AVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFK 397
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
G+ +R VV W+SM+A + ++L + M+ + +S+ P A+
Sbjct: 398 GM--IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAI 455
Query: 261 VQGRLV-------------------------------------HSHGIHYGFDLDVSVIN 283
L S+ YG D ++
Sbjct: 456 TSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILT 515
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM------- 336
MY ID+A ++F+ I + W MI G+A G +L L+ M
Sbjct: 516 KFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKP 575
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ +G +P+ V++LS++ CG GAL G+WF +Y G + +++V A++DMYSKCGS+
Sbjct: 576 DNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSL 635
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
AR LF K +V W+ MIA ++G +A+DLF Q+++ +RP+ VTF VL AC
Sbjct: 636 DLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC 695
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+H+G LE+G + ++ I+ +L +Y+CM DLLGR G+L EA+D +++MP++ DA
Sbjct: 696 SHSGLLEEGKMYFQLMTEEFVIAR--KLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDA 753
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
IWG+LL AC+IH N+++ E +A LF L+P A +V ++N YA RW+ V +R MM
Sbjct: 754 SIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMM 813
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIP 636
R K G SL + + F DR H + E Y L+ LA A HL ++P
Sbjct: 814 ARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELA------APMKHLGYVP 867
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 202/507 (39%), Gaps = 90/507 (17%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
++++I + W + + A+K++ +FR M + I+P+ + I A ++L
Sbjct: 293 KIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG 352
Query: 69 DLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ +HG++V+S F KC L A K+F M VRDV W++M+
Sbjct: 353 IFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIA 412
Query: 115 GFAQMGFLENVLRLFYNMRLV----------GIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+ G L +F M V +Q + +T + A H+
Sbjct: 413 AYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTL-ATHIPWKVKAF 471
Query: 165 SFGIHI----------------------------GVDADVSVCNTWISSYAKCDDLKMAE 196
H G+ D + + Y + + A
Sbjct: 472 YMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAAS 531
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV----VSLLS 252
+VF I + WN M+ G +F SL Y MM G + D + V VS+LS
Sbjct: 532 IVFEDIPNPCSFL--WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILS 589
Query: 253 SFV-CPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
+ C AL +G HS+ I GF+ D+ V ++ MYSKCG +D AR LFD +
Sbjct: 590 VLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD 649
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF-- 367
V W+AMI+ Y G +A+ LF M AG P VT ++S C SG LE GK +
Sbjct: 650 LVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ 709
Query: 368 ------------DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSW 414
NYAC ++D+ + G + +A +L +P E W
Sbjct: 710 LMTEEFVIARKLSNYAC-------------MVDLLGRAGQLSEAVDLIENMPVEPDASIW 756
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELD 441
+++ C ++ A + L LD
Sbjct: 757 GSLLGACRIHNNLDLAEKIADHLFHLD 783
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 223/538 (41%), Gaps = 90/538 (16%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMI 76
++ WNS +R + + +TL LF M E P+N T P KACA L L ++I
Sbjct: 66 NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125
Query: 77 HGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
HG K+ + KC ++ A K+F+E D W +M+ G+ Q
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185
Query: 122 LENVLRLFYNMRLVG-IQADFVTVMGLTQ-------AAIHAKHLSLL--KSVHSFGIHIG 171
E L LF M ++ D V L I A S + K V S+ I
Sbjct: 186 PEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIA 245
Query: 172 VDADVSVCNTWISSYAKCDDLK--------MAELVFCGIEERL------------RTVVS 211
A+ N ++ + + + + ++ L C + L + VVS
Sbjct: 246 CYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVS 305
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
W ++++G S+ +R+M+ +G + D VV +L++ Q +H + +
Sbjct: 306 WVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV 365
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
GF+ +V V +LI +YSKCG + A LF G+ R V W++MI+ Y G EAL
Sbjct: 366 RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALE 425
Query: 332 LF---------------FAMEAAGELPDLVTVLSMISGCG--------QSGALELGKWFD 368
+F +M+ + P +T ++ + ++ LG +++
Sbjct: 426 IFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWE 485
Query: 369 NYAC--------------SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
+ + GL+ + + MY I A +F +P W
Sbjct: 486 IFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLW 545
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLR-------PNRVTFLAVLQACTHTGFLEKG 465
MI G A +G F+ +L+L+ ++ME L+ PNRV+ L+VL AC + G L KG
Sbjct: 546 NVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG 603
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 193/455 (42%), Gaps = 71/455 (15%)
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
++ L QA + + +S L HS G+ D S YAKC L+ A VF
Sbjct: 6 VLVDLFQACNNGRSVSQL---HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF--D 60
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALV 261
E V WNS + +++++L + M+ G D T+ L + L
Sbjct: 61 ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120
Query: 262 QGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G+++H D+ V + L+ +YSKCG + A +F+ V WT+M++GY
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY 180
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q D +EAL LF M ++ C FD ++
Sbjct: 181 QQNNDPEEALALFSQM--------------VMMDC-----------FDG---------DL 206
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ N+L+++Y+K G A LF +PEK V+SW+TMIA A N EAL+LFH+++E
Sbjct: 207 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 266
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKG--------------WAISIIQYDDKGISYNPELDH 486
PN VT ++ LQAC + LE+G W + Y G++Y
Sbjct: 267 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVF 326
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
+ ++D G +A+ V+ + S+ GI+ LC + YV F
Sbjct: 327 RNMLSD-----GIQPDAVAVVKILAASSELGIFQQALC---------LHGYVVRSGFNSN 372
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV 581
A +E+ +K G D V + M+ R+ V
Sbjct: 373 VFVGASLIELYSK--CGSLGDAVKLFKGMIVRDVV 405
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 192/452 (42%), Gaps = 79/452 (17%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA- 139
+ S + KC L A K+FDE +V WN+ L + + E LRLF+ M +A
Sbjct: 42 LNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAP 101
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D T+ +A + L L K +H F + + +D+ V + + Y+KC + A V
Sbjct: 102 DNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKV 161
Query: 199 FCGIEERLRT-VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F EE R V W SMV G + +++L + M+ +D
Sbjct: 162 F---EEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVM----MDC------------- 201
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
FD D+ ++N+L+++Y+K G A LF + ++ +SW+ MI
Sbjct: 202 -----------------FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMI 244
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ YA +EAL LF M P+ VTV+S + C S LE GK A
Sbjct: 245 ACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV----- 299
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
K VVSW +++G A NG +++ +F +
Sbjct: 300 ------------------------------WKDVVSWVALLSGYAQNGMAYKSMGVFRNM 329
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++P+ V + +L A + G ++ A+ + Y + +N + + + +L +
Sbjct: 330 LSDGIQPDAVAVVKILAASSELGIFQQ--ALCLHGYVVRS-GFNSNVFVGASLIELYSKC 386
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G L +A+ + M ++ D IW +++ A IH
Sbjct: 387 GSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIH 417
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/579 (31%), Positives = 299/579 (51%), Gaps = 23/579 (3%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI---VKSP----- 84
EAH L ++M D+ ++ + +AC KL L ++IH + VK+P
Sbjct: 69 KEAHDFL---KEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIE 125
Query: 85 ------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
+ C K+FDEM ++++ SW ++ +A+ G LE +RLF +M+ GI+
Sbjct: 126 NCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIR 185
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ M L Q+ + L L K +HS I ++A+++V + Y +C L+ A+LV
Sbjct: 186 PNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLV 245
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP- 257
F G++ + V+W ++ G T K + +L + M G LD V S++ C
Sbjct: 246 FDGMDAQ--NAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELD-EFVFSIVLKVCCXL 302
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
E G+ +HSH + G + +VSV L+ Y KCGDI+SA F I + VSW+A+I
Sbjct: 303 EDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALI 362
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SG++Q G L++ +++F ++ + G + + S+ C L +G A GL
Sbjct: 363 SGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ +A++ MYSKCG + AR F ++ E V+WT +I+G A +G EAL F ++
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRM 482
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+RPN VTF+AVL AC+H+G + + D G+ P +DHY CM D R
Sbjct: 483 QSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGV--KPTIDHYDCMIDTYSRA 540
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G L EAL+ + MP + DA W +LL C H ++++G+ A LF+L+P A Y+ +
Sbjct: 541 GLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLF 600
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
N Y+ G+W+ ++R +M ++KK S + G+
Sbjct: 601 NLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQV 639
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 202/416 (48%), Gaps = 18/416 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I E K + LF M+ + I PN+ + + ++C S L + +H H++
Sbjct: 156 WVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVI 215
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ +V+C L+ A +FD M ++ +W ++VG+ Q LE L
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALE 275
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + G++ D + + + + K +HS + +G +++VSV + Y
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYV 335
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D++ A F I E VSW+++++G + + +D + + + G L+
Sbjct: 336 KCGDIESAYRSFGRISE--PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIY 393
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+ + L G H I G + + +++MYSKCG +D AR F+ I +
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKW 366
V+WTA+ISGYA G+ EAL F M++ G P+ VT +++++ C SG + E ++
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY 513
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
+ + G+K + + +ID YS+ G + +A EL +P E +SW +++ GC
Sbjct: 514 LGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGC 569
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 180/547 (32%), Positives = 290/547 (53%), Gaps = 47/547 (8%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
IFDE+ ++V +N M+ + + L +F NM GI D T + +A+ ++
Sbjct: 1082 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 1141
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
L + +H+ + +G+D +V V N IS Y KC L A C + + + R VVSWNS
Sbjct: 1142 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEA----CRVLDZMPCRDVVSWNS 1197
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+VAGC +FDD+L + M G + D T+ SLL +
Sbjct: 1198 LVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA--------------------- 1236
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
V NT + ++ + +F + +++ VSW MI+ Y EA+ +F
Sbjct: 1237 ------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFL 1284
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
ME PD +++ S++ CG AL LG+ Y L+ N+++ NALIDMY+KCG
Sbjct: 1285 QMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCG 1344
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ ARE+F + + VVSWT+MI+ +NG+ +A+ LF ++ +L L P+ + F++VL
Sbjct: 1345 CLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLS 1404
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+H G L++G + ++ I P ++H+ CM DLLGR G++ EA F++ MP++
Sbjct: 1405 ACSHAGLLDEGRYYFKLMTEECKIV--PRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEP 1462
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
+ +WG LL AC+++ N+ IG A LF+L P + YV ++N YA GRW+ V +R+
Sbjct: 1463 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRS 1522
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
+MK +KK PG S F ++ + TF A D+ H +S+ Y LD L +E Y
Sbjct: 1523 IMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGY------ 1576
Query: 635 IPEHEAG 641
+PE ++
Sbjct: 1577 VPETDSA 1583
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 200/437 (45%), Gaps = 55/437 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N IR VN + LL+F+ M + I+P++ T+P + KA + DL IH +V
Sbjct: 1094 FNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVV 1153
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ S + KC L A ++ DZM RDV SWN+++ G A+ G ++ L
Sbjct: 1154 RVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALE 1213
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M L+G++ D T+ L A V NT +
Sbjct: 1214 VCKEMELLGLKPDAGTMASLLPA---------------------------VTNTCL---- 1242
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
D++ + +F + +++VSWN M+A ++++ + M + D ++
Sbjct: 1243 --DNVSFVKEMFMKLAN--KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISI 1298
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + AL+ GR +H + + ++ + N LI MY+KCG ++ AR +FD +
Sbjct: 1299 ASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF 1358
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSWT+MIS Y G +A+ LF M+ G PD + +S++S C +G L+ G+++
Sbjct: 1359 RDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYY 1418
Query: 368 DNY---ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCAL 423
C + VC ++D+ + G + +A +P E W +++ C +
Sbjct: 1419 FKLMTEECKIVPRIEHFVC--MVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRV 1476
Query: 424 NGEFVEALDLFHQLMEL 440
+ L QL +L
Sbjct: 1477 YSNMIIGLLAADQLFQL 1493
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
H +H L + L+ Y+ CG+ S R +FD I + V + MI Y +
Sbjct: 1054 HDLHSNPSLGIK----LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSD 1109
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL +F M G PD T ++ S L +G GL NV V N LI
Sbjct: 1110 ALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLIS 1169
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY KCG + +A + +P + VVSW +++AGCA NG+F +AL++ ++ L L+P+ T
Sbjct: 1170 MYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGT 1229
Query: 449 FLAVLQACTHT 459
++L A T+T
Sbjct: 1230 MASLLPAVTNT 1240
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+ Y+ CG R +F +P+K VV + MI N + +AL +F + + P+
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 446 RVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
T+ VL+A + + L G I ++++ G+ N + + + + G+ G L EA
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRV---GLDLNVFVGN--GLISMYGKCGCLVEA 1180
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
+ MP + D W +L+ C
Sbjct: 1181 CRVLDZMPCR-DVVSWNSLVAGC 1202
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 197/636 (30%), Positives = 322/636 (50%), Gaps = 26/636 (4%)
Query: 22 WNSQIREAVNKNEAHK----TLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
WNS I A ++N + + LFR+M + N++ PN T + A + LSD++ +
Sbjct: 82 WNSLIN-AFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 77 HGHIVKSP-----FVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H VK+ +V L+ A K+FD M R+ SW M+ G+A
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 123 ENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ + +F MR IQ +F + + A + + VHS I G+ A VSV N
Sbjct: 201 DKAVEVFELMRREEEIQNEF-ALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANA 259
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ YAKC L A F ++ ++W++MV G G D +L + M +G
Sbjct: 260 LVTMYAKCGSLDDAVRTFEFSGDK--NSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T+V ++++ A+V+G+ +HS GF L + V++ ++ MY+KCG + AR
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + V WT++I+GY Q GD + L L+ M+ +P+ +T+ S++ C AL
Sbjct: 378 FECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAAL 437
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ GK G K V + +AL MY+KCGS+ D +F+ +P + V+SW MI+G
Sbjct: 438 DQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGL 497
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+ NG +AL+LF +++ ++P+ VTF+ +L AC+H G +++GW + +D+ I+
Sbjct: 498 SQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIA-- 555
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++HY+CM D+L R GKL EA +F++S + +W LL ACK H N E+G Y
Sbjct: 556 PMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEK 615
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +L ++ YV +++ Y G + V +R +MK V K PG S + G F
Sbjct: 616 LVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVV 675
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPE 637
D H + + L+ L +E Y L +PE
Sbjct: 676 GDNQHPQVDEIRLELELLTKLMIDEGYQPLLDRLPE 711
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 245/505 (48%), Gaps = 46/505 (9%)
Query: 43 RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKC 88
RQ+ Q+ IE C +++ + +H I+K+ + K
Sbjct: 12 RQLLQDLIE------------CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKT 59
Query: 89 DRLDCAYKIFDEMAV--RDVASWNAMLVGFAQ------MGFLENVLRLFYNMRLVGIQAD 140
+ L A +FD + +D SWN+++ F+Q F ++ R MR + +
Sbjct: 60 NHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRM--MRANNVIPN 117
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T+ G+ AA + + K HS + G DV V ++ ++ Y K + A +F
Sbjct: 118 AHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFD 177
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ E R VSW +M++G D D ++ + M + + S+LS+ +
Sbjct: 178 RMPE--RNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFV 235
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
GR VHS I G VSV N L++MY+KCG +D A F+ D+ ++W+AM++GY
Sbjct: 236 YTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGY 295
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
AQ GD D+AL+LF M ++G LP T++ +I+ C A+ GK ++A G +
Sbjct: 296 AQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQL 355
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V +A++DMY+KCGS+ DAR+ F + + VV WT++I G NG++ L+L+ ++
Sbjct: 356 YVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQME 415
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ PN +T +VL+AC+ L++G + II+Y + E+ S ++ + + G
Sbjct: 416 RVIPNELTMASVLRACSSLAALDQGKQMHARIIKY-----GFKLEVPIGSALSAMYTKCG 470
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLL 523
L + MP + D W ++
Sbjct: 471 SLDDGYLIFWRMPSR-DVISWNAMI 494
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 314/635 (49%), Gaps = 22/635 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + V A++ + LF MK P++ T+ I ACA L L +H I+
Sbjct: 396 WNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVII 455
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K L+ A + F+ + RD SWN ++VG+ Q
Sbjct: 456 KNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFH 515
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M L+GI D V++ + A + L K VH + G + + ++ I YA
Sbjct: 516 LFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYA 575
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A + + ER +VVS N+++AG + + ++N +R M+ G T
Sbjct: 576 KCGAIDSAHKILACMPER--SVVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITF 632
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFDGIC 306
SLL + + L GR +HS + G LD + +L+ MY A VLF
Sbjct: 633 ASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFS 692
Query: 307 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ ++ V WTAMISG +Q AL+L+ M + LPD T +S + C +++ G
Sbjct: 693 NPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGT 752
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+ G + + +AL+DMY+KCG + + ++F + +K V+SW +MI G A N
Sbjct: 753 ETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKN 812
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G +AL +F ++ + + P+ VTFL VL AC+H+G + +G I + + G+ P
Sbjct: 813 GYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGM--QPRA 870
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
DH +CM DLLGR G LKEA +F+ + + DA +W T+L AC+IH + G+ A L +
Sbjct: 871 DHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIE 930
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP +++PYV ++N YA G WD V +R M+ VKK PG S + +T F A D+
Sbjct: 931 LEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDK 990
Query: 605 YHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
H + +L L RE Y L + + E
Sbjct: 991 SHHSASEIDAILKDLTPLMRENDYVVQLDFFGDDE 1025
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 234/507 (46%), Gaps = 54/507 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + H + F + + + PN TF + +CA+L + + +H ++V
Sbjct: 128 WNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVV 187
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F KC+ L A IFD D SW +M+ G+ ++G E ++
Sbjct: 188 KMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVK 247
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M VG + D V + T I++Y
Sbjct: 248 VFQEMEKVGQEPDQVAFV-----------------------------------TVINAYV 272
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
L A +F + R VV+WN M++G G +++ F+++M G + +T+
Sbjct: 273 DLGRLDNASDLFSRMPNR--NVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTL 330
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ AL G LVH+ + G +V V ++L+SMY+KCG +++A+ +FD + +
Sbjct: 331 GSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNE 390
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W AM+ GY Q G +E + LFF M++ G PD T S++S C L+LG
Sbjct: 391 QNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQL 450
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ N+ V NAL+DMY+K G++ DAR+ F + + VSW +I G +
Sbjct: 451 HSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDE 510
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
VEA LF ++ L + P+ V+ ++L AC LE+G + + +L
Sbjct: 511 VEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVK---TGQETKLYSG 567
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKS 514
S + D+ + G + A + MP +S
Sbjct: 568 SSLIDMYAKCGAIDSAHKILACMPERS 594
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/448 (30%), Positives = 221/448 (49%), Gaps = 26/448 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I + + + +F++M++ EP+ + F + A
Sbjct: 229 WTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA------------------ 270
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
+V RLD A +F M R+V +WN M+ G A+ G+ + F NMR GI++
Sbjct: 271 ---YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTR 327
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T+ + A L VH+ + G+ ++V V ++ +S YAKC ++ A+ VF
Sbjct: 328 STLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDT 387
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ E+ VV WN+M+ G ++ + + +M GF D T S+LS+ C + L
Sbjct: 388 LNEQ--NVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLD 445
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G +HS I F ++ V N L+ MY+K G ++ AR F+ I +R VSW +I GY
Sbjct: 446 LGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYV 505
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q+ D EA LF M G LPD V++ S++S C LE GK + G + +
Sbjct: 506 QEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLY 565
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA-LNGEFVEALDLFHQLMEL 440
++LIDMY+KCG+I A ++ +PE+ VVS +IAG A +N E +A++LF ++
Sbjct: 566 SGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE--QAVNLFRDMLVE 623
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ +TF ++L AC L G I
Sbjct: 624 GINSTEITFASLLDACHEQQKLNLGRQI 651
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 223/504 (44%), Gaps = 45/504 (8%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFI 60
+ S++P N + + ++ + K++ KT LF ++ Q + + T I
Sbjct: 23 LTFSAIPNGSNHPSHTLKPRIYTHILQNCLQKSKQVKTHSLFDEIPQR-LSQFSTTNKII 81
Query: 61 AKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
KL +S+ + G+++ + KC +D A + F ++ +D+ +WN++L ++ G
Sbjct: 82 HAQSLKLG--FWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQG 139
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
F V++ F + G+ + T + + + + + VH + +G ++ +S C
Sbjct: 140 FPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFES-ISYCE 198
Query: 181 -TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
I YAKC+ L A +F G E + VSW SM+ G ++++ ++ M G
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDK--VSWTSMIGGYIKVGLPEEAVKVFQEMEKVG 256
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D V T+I+ Y G +D+A
Sbjct: 257 QEPDQVAFV-----------------------------------TVINAYVDLGRLDNAS 281
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF + +R V+W MISG+A+ G EA+ F M AG T+ S++S
Sbjct: 282 DLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLA 341
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL+ G A GL NV V ++L+ MY+KCG + A+++F L E+ VV W M+
Sbjct: 342 ALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLG 401
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G NG E ++LF + P+ T+ ++L AC +L+ G + + +K
Sbjct: 402 GYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNK--- 458
Query: 480 YNPELDHYSCMADLLGRKGKLKEA 503
+ L + + D+ + G L++A
Sbjct: 459 FASNLFVGNALVDMYAKSGALEDA 482
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 17/334 (5%)
Query: 257 PEALVQ----GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
P+ L Q +++H+ + GF + N ++ +Y+KC D+D A F + D+ ++
Sbjct: 68 PQRLSQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILA 127
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
W +++S ++++G ++ F + +G P+ T ++S C + ++ G+
Sbjct: 128 WNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVV 187
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
G + ALI MY+KC + DAR +F E VSWT+MI G G EA+
Sbjct: 188 KMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVK 247
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
+F ++ ++ P++V F+ V+ A G L+ + + +++N + ++
Sbjct: 248 VFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHA---- 303
Query: 493 LLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
+ G EA++F Q+M IKS G++L A ++ G V K HS
Sbjct: 304 ---KGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHS 360
Query: 550 AAPYV--EMANKYALGGRWDGVANIRTMMKRNQV 581
YV + + YA G+ + + + V
Sbjct: 361 NV-YVGSSLVSMYAKCGKMEAAKKVFDTLNEQNV 393
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 301/589 (51%), Gaps = 23/589 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH- 77
WN+ I + L FR M + I+P+ +T + CA+ D + ++++H
Sbjct: 205 SWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHC 264
Query: 78 ---------GHI-VKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
GH+ V + V KC + K+FDE+ R+V SWNA++ F+ G
Sbjct: 265 YALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYM 324
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ L +F M G++ + VT+ + L VH F + + +++DV + N+ I
Sbjct: 325 DALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLI 384
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAK ++A +F + +R +VSWN+M+A +++ R M G +
Sbjct: 385 DMYAKSGSSRIASTIFNKMG--VRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPN 442
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T ++L + L G+ +H+ I G LD+ V N L MYSKCG ++ A+ +F+
Sbjct: 443 NVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN 502
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I R VS+ +I GY++ D E+LRLF M G PD+V+ + ++S C +
Sbjct: 503 -ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQ 561
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK ++ V N+L+D+Y++CG I A ++FY + K V SW TMI G +
Sbjct: 562 GKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGM 621
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
GE A++LF + E + + V+F+AVL AC+H G +EKG + D ++ P
Sbjct: 622 RGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCD---LNIEPT 678
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
HY+CM DLLGR G ++EA D ++ + I D IWG LL AC+IH NIE+G + A LF
Sbjct: 679 HTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLF 738
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
+L+P Y+ ++N YA RWD +R +MK KK PG S +
Sbjct: 739 ELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQV 787
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 216/471 (45%), Gaps = 22/471 (4%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I+ S +N+ S I + KN + F Q PN L + ++ +
Sbjct: 2 IFHSHVVNKLPS-ITTPLTKNTHFSSF--FSTSLQTSNPPNLLQLCTLCDTLSQTKQVHA 58
Query: 73 SQMIHGHIVKSPFVKCDRLDCAYKIFDEMA------------VRDVASWNAMLVGFAQMG 120
++HG + +S + C L Y F + R WN ++ + G
Sbjct: 59 YSLLHGFLPRSVSL-CASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAG 117
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ + M G++ D T + + + + VH +G D DV V N
Sbjct: 118 VFDG-FGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGN 176
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM--YN 238
T ++ Y C A VF + ER + VSWN+++ C+ ++++L F+R M+
Sbjct: 177 TLLAFYGNCGLFGDAMKVFDEMPERDK--VSWNTVIGLCSLHGFYEEALGFFRVMVAAKP 234
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDS 297
G + D+ TVVS+L E V R+VH + + G V V N L+ +Y KCG +
Sbjct: 235 GIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKA 294
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
++ +FD I +R +SW A+I+ ++ +G +AL +F M G P+ VT+ SM+ G+
Sbjct: 295 SKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGE 354
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G +LG ++ ++ +V + N+LIDMY+K GS A +F + + +VSW M
Sbjct: 355 LGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAM 414
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
IA A N EA++L Q+ PN VTF VL AC GFL G I
Sbjct: 415 IANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEI 465
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 158/367 (43%), Gaps = 59/367 (16%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WN+ I ++ + L RQM+ PNN+TF + ACA+L L + IH
Sbjct: 407 NIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIH 466
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I++ + KC L+ A +F+ ++VRD S+N +++G+++
Sbjct: 467 ARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSL 525
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LRLF MRL+G++ D V+ MG+ A + + K +H + + V N+ +
Sbjct: 526 ESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLL 585
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y +C + +A VF I+ + V SWN+M+ G + D ++N + M +G D
Sbjct: 586 DLYTRCGRIDLATKVFYCIQN--KDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYD 643
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ V++LS+ C SHG G I+ R F
Sbjct: 644 SVSFVAVLSA--C-----------SHG----------------------GLIEKGRKYFK 668
Query: 304 GICD----RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+CD T + M+ + G ++EA L + +PD +++ C G
Sbjct: 669 MMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSI---IPDTNIWGALLGACRIHG 725
Query: 360 ALELGKW 366
+ELG W
Sbjct: 726 NIELGLW 732
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 308/624 (49%), Gaps = 24/624 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R WN + V + + LF +M + + PN F + AC DL +
Sbjct: 163 RDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGR 222
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H +V++ + K + A +F ++ DV SWNA + G G
Sbjct: 223 KVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHG 282
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSV 178
++ L L M+ G+ + T+ + +A A + + +H F I D+D +
Sbjct: 283 HDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYI 342
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ YAK L A VF I + ++ WN++++GC++G +SL+ + M
Sbjct: 343 GVALVDMYAKYGLLDDARKVFEWIPRK--DLLLWNALISGCSHGGCHGESLSLFCRMRKE 400
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G ++ TT+ ++L S EA+ VH+ GF D V+N LI Y KC + A
Sbjct: 401 GSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYA 460
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F+ +++T+MI+ +Q ++A++LF M G PD + S+++ C
Sbjct: 461 NKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASL 520
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
A E GK + +V NAL+ Y+KCGSI DA F LP+K VVSW+ MI
Sbjct: 521 SAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMI 580
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE--KGWAISIIQYDDK 476
G A +G ALD+F ++++ + PN +T +VL AC H G ++ KG+ S+ +
Sbjct: 581 GGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEM--F 638
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
GI E HYSCM DLLGR GKL +A++ V SMP +++A +WG LL A ++H + E+G+
Sbjct: 639 GIDRTEE--HYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGK 696
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A LF LEP + +V +AN YA G WD VA +R +MK ++VKK P S + +
Sbjct: 697 LAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRV 756
Query: 597 CTFTAEDRYHAESELTYPVLDCLA 620
TF D+ H + Y L+ L
Sbjct: 757 HTFIVGDKSHPRARDIYAKLEELG 780
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 197/418 (47%), Gaps = 20/418 (4%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------FVKCDRLDCAYKIFD 99
P +++ P + + A S L IH H++KS + KC A ++FD
Sbjct: 4 PESIS-PLLTRYAATQS-LFLGAHIHAHLLKSGLLHAFRNHLLSFYSKCRLPGSARRVFD 61
Query: 100 EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
E SW++++ ++ L F MR G++ + + + + A A L
Sbjct: 62 ETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDA---GL 118
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
VH+ + G+ D+ V N ++ Y + A VF R R VSWN M++
Sbjct: 119 GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVF-DEAARDRNAVSWNGMMSAF 177
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
D+ D++ + M+++G R + ++++ L GR VH+ + G+D DV
Sbjct: 178 VKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDV 237
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
N L+ MYSK GDI A ++F + VSW A ISG G AL L M+++
Sbjct: 238 FTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297
Query: 340 GELPDLVTVLSMIS--GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G +P++ T+ S++ +GA LG+ + + + AL+DMY+K G +
Sbjct: 298 GLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLD 357
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
DAR++F +P K ++ W +I+GC+ G E+L LF ++ + NR T AVL++
Sbjct: 358 DARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKS 415
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 202/477 (42%), Gaps = 19/477 (3%)
Query: 6 LPPRLNRIYRSSTIN---QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
LP R++ + W+S + N + L FR M+ + N P + K
Sbjct: 52 LPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK 111
Query: 63 AC--AKLSDLIYSQMIHGHIVKSPFVK---------CDRLDCAYKIFDEMAV-RDVASWN 110
A L +++ + + FV +D A ++FDE A R+ SWN
Sbjct: 112 CAPDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWN 171
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
M+ F + + + LF M G++ + + A ++ L + VH+ +
Sbjct: 172 GMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRT 231
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G D DV N + Y+K D+ MA LVF + + VVSWN+ ++GC +L
Sbjct: 232 GYDKDVFTANALVDMYSKLGDIHMAALVFGKVPK--TDVVSWNAFISGCVLHGHDQHALE 289
Query: 231 FYRHMMYNGFRLDVTTVVSLLS--SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
M +G +V T+ S+L + A GR +H I D D + L+ M
Sbjct: 290 LLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDM 349
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y+K G +D AR +F+ I + + W A+ISG + G E+L LF M G + T+
Sbjct: 350 YAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTL 409
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
+++ A+ A G + V N LID Y KC + A ++F
Sbjct: 410 AAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSS 469
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
++++T+MI + +A+ LF +++ L P+ ++L AC E+G
Sbjct: 470 DNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 526
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 168/376 (44%), Gaps = 26/376 (6%)
Query: 156 HLSLLKS--VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
H LLKS +H+F H+ +S Y+KC A VF + VSW+
Sbjct: 27 HAHLLKSGLLHAFRNHL------------LSFYSKCRLPGSARRVFDETPDPCH--VSWS 72
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
S+V + ++L +R M G R + + +L C G VH+ +
Sbjct: 73 SLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK---CAPDAGLGVQVHAVAVST 129
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGIC-DRTRVSWTAMISGYAQKGDLDEALRL 332
G D+ V N L++MY G +D AR +FD DR VSW M+S + + +A+ L
Sbjct: 130 GLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVEL 189
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M +G P+ +++ C S LE G+ G +V NAL+DMYSK
Sbjct: 190 FGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSK 249
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
G I A +F +P+ VVSW I+GC L+G AL+L Q+ L PN T ++
Sbjct: 250 LGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSI 309
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSM 510
L+AC G I + K + + D Y +A D+ + G L +A + +
Sbjct: 310 LKACAGAGAGAFALGRQIHGFMIKACA---DSDDYIGVALVDMYAKYGLLDDARKVFEWI 366
Query: 511 PIKSDAGIWGTLLCAC 526
P K D +W L+ C
Sbjct: 367 PRK-DLLLWNALISGC 381
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ S I + S I + + LF +M + +EP+ + ACA LS
Sbjct: 467 HSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 526
Query: 74 QMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H H++K F+ KC ++ A F + + V SW+AM+ G AQ
Sbjct: 527 KQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQH 586
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G + L +F M I + +T+ + A HA
Sbjct: 587 GHGKRALDVFRRMVDERIAPNHITLTSVLCACNHA 621
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 191/588 (32%), Positives = 300/588 (51%), Gaps = 23/588 (3%)
Query: 47 QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDV 106
+N + P +F + +A L L+ S + + S +K D ++I +V
Sbjct: 55 RNGLRP---SFSPLGRAAGFLETLVSSFVQLEIELPSNTLKAGENDPTHEI-------NV 104
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
++NA++ GF GF E + MR G+ D T +A + + K +H
Sbjct: 105 FAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIHGL 161
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
G++ DV + + ++ Y K ++ A++ F E +R VV WN+MV G +F+
Sbjct: 162 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAF--EELPIRDVVLWNAMVNGYAQIGQFE 219
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
L +R M TV LS F L GR++H + G+D V+V N+LI
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY KC I+ A +F+ + ++ SW +++S + Q GD D LRL M AG PDLV
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDMYSKCGSIGDAR 400
TV +++ C AL G+ Y GL D+V++ NA+IDMY+KCGS+ DA
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F + K V SW MI G ++G EAL++F ++ E+ L+P+ VTF+ VL AC+H G
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAG 459
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
F+ +G ++Q K P ++HY+C+ D+LGR G+L EA + +MPI+++ +W
Sbjct: 460 FVSQGRNF-LVQMKSK-YDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
LL AC++H + + E A +F+LEP YV M+N Y GR++ V +R M++
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQN 577
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
V+K PG S + F + DR H E+ Y L+ L E Y
Sbjct: 578 VRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARLXEHGY 625
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 209/446 (46%), Gaps = 35/446 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I + + +++M+ + P+ TFP KAC D++ + IHG +
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL---DVLEIKKIHGLLF 163
Query: 82 K----------SPFVKC----DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S V C ++ A F+E+ +RDV WNAM+ G+AQ+G E VL
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 223
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + TV G L+ + +H F + +G D+ V+V N+ I Y
Sbjct: 224 TFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F + E + + SWNS+V+ D +L M+ G + D+ TV
Sbjct: 284 KCKCIEDALEIFEMMRE--KDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGF-----DL-DVSVINTLISMYSKCGDIDSARVL 301
++L + AL+ GR +H + I G D+ DV + N +I MY+KCG + A ++
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + ++ SW MI GY G +EAL +F M PD VT + ++S C +G +
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 461
Query: 362 ELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWT 415
G+ F Y + ++ V IDM + G + +A EL +P E V W
Sbjct: 462 SQGRNFLVQMKSKYDVAPTIEHYTCV----IDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 416 TMIAGCALNGEFVEALDLFHQLMELD 441
++A C L+ V A ++ EL+
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELE 543
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
+ R I WNS + + TL L +M I+P+ +T + AC+ L+ L+
Sbjct: 296 EMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALM 355
Query: 72 YSQMIHGHIVKSP--------------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
+ + IHG+++ S + KC + A+ +F+ M+ +DVASWN
Sbjct: 356 HGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNI 415
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
M++G+ G+ L +F M V ++ D VT +G+ A HA +S
Sbjct: 416 MIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 462
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 305/589 (51%), Gaps = 23/589 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY---SQMIHG 78
WN IR + L +FR+M++ + P+N T + A A + L + IH
Sbjct: 86 WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145
Query: 79 HIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ + F ++ A K+F+EM RDV SW +M+ AQ G +
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
VL++ M+ GI + VT++ L A + + + V++ G++ADV + N IS
Sbjct: 206 VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALIS 265
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC L A F + R SWN+++ G + ++L + M+ +G D
Sbjct: 266 MYTKCGCLSDALEAFQAMPARYTK--SWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDG 323
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+VS+LS+ L +G VHS+ G D + N+LI+MY+KCGD+ +A +F
Sbjct: 324 ITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQT 383
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + VSWT M+ GY + A LF M+ A + + ++S++S C Q GAL+ G
Sbjct: 384 MTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG 443
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ +Y + ++ + +AL+DMY+KCG I A E+F + K +SW MI G A N
Sbjct: 444 REIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASN 503
Query: 425 GEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
G EA++LF Q++EL D +P+ +T AVL AC H G +++G Y + P+
Sbjct: 504 GYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYF---YLMSSLGVVPD 560
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+HY C+ DLLGR G L EA F++ MPI+ + IWG+LL AC++H +++G+ + +
Sbjct: 561 TEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIV 620
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
+ P+ +V ++N +A +WD V ++R +M ++K PG S +
Sbjct: 621 NVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 211/423 (49%), Gaps = 19/423 (4%)
Query: 63 ACAKLSDL--IYSQMIHGHIVKSPFV----------KCDRLDCAY--KIFDEMAVRDVAS 108
ACA + L ++ +++ H+ FV R D Y K+FD MA +
Sbjct: 26 ACASRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFV 85
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL---SLLKSVHS 165
WN M+ G++ + L +F MR G+ D T+ + A+ L S ++H+
Sbjct: 86 WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
IG +DV V + ++ Y ++ A VF + ER VVSW SM++ C +
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYER--DVVSWTSMISACAQCGHW 203
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D L M G + T++SLLS+ +A+ +GR V++ +G + DV + N L
Sbjct: 204 DKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNAL 263
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
ISMY+KCG + A F + R SW +I G+ Q + EALR+F M G PD
Sbjct: 264 ISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDG 323
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T++S++S C Q G L G +Y G+ + ++ N+LI+MY+KCG + A +F
Sbjct: 324 ITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQT 383
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ +K VVSWT M+ G +F A +LF ++ ++ + + +++L AC+ G L+KG
Sbjct: 384 MTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG 443
Query: 466 WAI 468
I
Sbjct: 444 REI 446
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 277/523 (52%), Gaps = 10/523 (1%)
Query: 102 AVRDVAS--WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
AV VAS WN L A + L+ +M G D + + ++ LSL
Sbjct: 12 AVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSC---ASLSL 68
Query: 160 LKSVHSFGIHI---GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
S H+ G + + V IS Y KC + A VF + + V +N+++
Sbjct: 69 PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G T K D+ +R M G +D T++ L+ PE L GR +H + G D
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+V+V+N+ I+MY KCG +++ R LFD + + ++W A+ISGY+Q G + L L+ M
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+++G PD T++S++S C GA ++G S G NV V NA I MY++CG++
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
AR +F +P K +VSWT MI ++G L LF +++ +RP+ F+ VL AC
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+H+G +KG + + + + P +HYSC+ DLLGR G+L EA++F++SMP++ D
Sbjct: 369 SHSGLTDKG--LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
+WG LL ACKIH N+++ E + + EP++ YV M+N Y+ +G+ IR MM
Sbjct: 427 AVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+ +K PG S G+ F A DR H ++E + +LD L
Sbjct: 487 RERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 234/478 (48%), Gaps = 35/478 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN ++RE ++ +++ L+R M ++ P+ +FPFI K+CA LS + Q +H H+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 82 K-----SPFV---------KCDRLDCAYKIFDEMAVRDVAS--WNAMLVGFAQMGFLENV 125
K PFV KC + A K+F+E S +NA++ G+ + +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+F M+ G+ D VT++GL ++L L +S+H + G+D++V+V N++I+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC ++ +F E ++ +++WN++++G + D L Y M +G D
Sbjct: 201 YMKCGSVEAGRRLF--DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 246 TVVSLLSSFVCPEALVQ------GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
T+VS+LSS C + G+LV S+ GF +V V N ISMY++CG++ AR
Sbjct: 259 TLVSVLSS--CAHLGAKKIGHEVGKLVESN----GFVPNVFVSNASISMYARCGNLAKAR 312
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+FD + ++ VSWTAMI Y G + L LF M G PD + ++S C SG
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
+ G + F L+ + L+D+ + G + +A E ++P E W +
Sbjct: 373 LTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYD 474
+ C ++ A F +++E + PN + + ++ ++G W I ++ +
Sbjct: 433 LGACKIHKNVDMAELAFAKVIEFE--PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 285/553 (51%), Gaps = 51/553 (9%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + K ++ +FD+M+V D S+N ++ GF+ G L F M+ G ++
Sbjct: 97 SAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDY 156
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + + A + K +H + + V V N + YAKC L A +F
Sbjct: 157 THVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLF--- 213
Query: 203 EERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+R+ + VVSWNSM++G + + + M +G D T+ ++LS+
Sbjct: 214 -DRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA------- 265
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
Y +CG ID A F I ++ +V WT M+ G
Sbjct: 266 ----------------------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGC 297
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
AQ G ++AL LF M PD T+ S++S C + +L G+ A G+ ++
Sbjct: 298 AQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDL 357
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+V +AL+DMYSKCG DA +F + + V+SW +MI G A NG+ +EAL L+ +++
Sbjct: 358 LVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHE 417
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKG----WAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+L+P+ +TF+ VL AC H G +E+G ++IS I NP DHYSCM +LLGR
Sbjct: 418 NLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIH------GMNPTFDHYSCMINLLGR 471
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G + +A+D ++SM + + IW TLL C+I+ ++ GE A LF+L+PH+A PY+ +
Sbjct: 472 AGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIML 531
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+N YA GRW VA +R++MK N++KKF S I+ + F AEDR H+E+E Y L
Sbjct: 532 SNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEEL 591
Query: 617 DCLALHSREEAYS 629
+ L +E ++
Sbjct: 592 NRLIKKLQESGFT 604
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 53/421 (12%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+ L F +M++ E + T + AC++L D+ + IHG IV +
Sbjct: 138 QALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALT 197
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ KC LD A +FD M ++V SWN+M+ G+ Q G E +LF M+ G+ D V
Sbjct: 198 NMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQV 257
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + +S+Y +C + A F I
Sbjct: 258 TISNI-----------------------------------LSAYFQCGYIDEACKTFREI 282
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+E+ + V W +M+ GC K +D+L +R M+ R D T+ S++SS +L Q
Sbjct: 283 KEKDK--VCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQ 340
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ VH + +G D D+ V + L+ MYSKCG+ A ++F + R +SW +MI GYAQ
Sbjct: 341 GQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQ 400
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVM 381
G EAL L+ M PD +T + ++S C +G +E G+ +F + + G+
Sbjct: 401 NGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFD 460
Query: 382 VCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ +I++ + G + A +L ++ E + W+T+++ C +N + L EL
Sbjct: 461 HYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFEL 520
Query: 441 D 441
D
Sbjct: 521 D 521
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 258 EALVQGRLVH----SHGIHYGFDL-------DVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +Q RL+H S + DL DV N ++S YSK G+++ R +FD +
Sbjct: 57 DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMS 116
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
VS+ +I+G++ G +AL F M+ G T +S++ C Q ++ GK
Sbjct: 117 VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQ 176
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ L ++V V NAL +MY+KCG++ AR LF + K VVSW +MI+G NG+
Sbjct: 177 IHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQ 236
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
LF ++ L P++VT +L A G++++
Sbjct: 237 PETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEA 275
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
DV N +S+Y+K +++ VF + + VS+N+++AG + +L F+
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMS--VHDAVSYNTVIAGFSGNGCSSQALEFFVR 145
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M GF T VS+L + C + L R HG L SV
Sbjct: 146 MQEEGFESTDYTHVSVLHA--CSQLLDIKRGKQIHGRIVATSLGESVF------------ 191
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
W A+ + YA+ G LD+A LF M ++V+ SMISG
Sbjct: 192 -----------------VWNALTNMYAKCGALDQARWLFDRMVN----KNVVSWNSMISG 230
Query: 355 CGQSGALEL-GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
Q+G E K F SG + D V + N ++ Y +CG I +A + F + EK V
Sbjct: 231 YLQNGQPETCTKLFCEMQSSGLMPDQVTISN-ILSAYFQCGYIDEACKTFREIKEKDKVC 289
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
WTTM+ GCA NG+ +AL LF +++ ++RP+ T +V+ +C L +G A+
Sbjct: 290 WTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAV 344
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH-- 79
W + + + LLLFR+M ++ P+N T + +CA+L+ L Q +HG
Sbjct: 290 WTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAV 349
Query: 80 --------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+V S V KC A+ +F M R+V SWN+M++G+AQ G L
Sbjct: 350 IFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALA 409
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+ M ++ D +T +G+ A +HA
Sbjct: 410 LYEEMLHENLKPDNITFVGVLSACMHA 436
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 289/544 (53%), Gaps = 13/544 (2%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
R+ A ++FD++ ++A WN+M G+AQ V+ LF+ M+ + I+ + T + +
Sbjct: 85 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 144
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ L + VH F I G + V T I Y+ + A +FC + ER V
Sbjct: 145 SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFER--NV 202
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V+W SM+ G L R + DV ++S ++ +V+ R +
Sbjct: 203 VAWTSMINGYI----LSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKL--- 255
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
H + DV NT++ Y+ G++++ LF+ + +R SW A+I GYA G E
Sbjct: 256 -FHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEV 314
Query: 330 LRLFFAMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
L F M + ++P + T+++++S C + GAL+LGKW YA S GLK NV V NAL+D
Sbjct: 315 LGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMD 374
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+KCG I +A +F + K ++SW T+I G A++ +AL+LF Q+ +P+ +T
Sbjct: 375 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 434
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F+ +L ACTH G +E G+A DD I P+++HY CM D+L R G+L++A+ FV+
Sbjct: 435 FIGILCACTHMGLVEDGFAYFQSMADDYLIM--PQIEHYGCMVDMLARAGRLEQAMAFVR 492
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
MP+++D IW LL AC+I+ N+E+ E L +LEP + A YV ++N Y GRW+
Sbjct: 493 KMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWED 552
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
VA ++ M+ KK PG SL +N F + D H + E Y VL L R Y
Sbjct: 553 VARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY 612
Query: 629 SSHL 632
L
Sbjct: 613 VPDL 616
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 205/443 (46%), Gaps = 27/443 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WNS R + + LF QMK DI PN TFP + K+C K++ LI + +H
Sbjct: 100 NIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVH 159
Query: 78 GHIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
++K +PFV +D AYKIF EM R+V +W +M+ G+ L
Sbjct: 160 CFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLV 219
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ RLF + + D V + I + + + H + DV NT +
Sbjct: 220 SARRLFD----LAPERDVVLWNIMVSGYIEGGDMVEARKL----FHEMPNRDVMFWNTVL 271
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRL 242
YA +++ E +F + E R + SWN+++ G + F + L ++ M+
Sbjct: 272 KGYATNGNVEALEGLFEEMPE--RNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPP 329
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T+V++LS+ AL G+ VH + G +V V N L+ MY+KCG I++A +F
Sbjct: 330 NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVF 389
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
G+ + +SW +I G A +AL LFF M+ AG+ PD +T + ++ C G +E
Sbjct: 390 RGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVE 449
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAG 420
G +F + A + + ++DM ++ G + A +P E V W ++
Sbjct: 450 DGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGA 509
Query: 421 CALNGEFVEALDLFHQLMELDLR 443
C + A +L+EL+ +
Sbjct: 510 CRIYKNVELAELALQRLIELEPK 532
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 12/225 (5%)
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
RL +SLL S + + Q + + I GF + + L+++ + + AR
Sbjct: 35 RLLEERFISLLQSCKTSKQVHQ---IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQ 91
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LFD I D W +M GYAQ E + LFF M+ P+ T ++ CG+ A
Sbjct: 92 LFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINA 151
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L G+ + G + N V LIDMYS G++GDA ++F + E+ VV+WT+MI G
Sbjct: 152 LIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMING 211
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
L+ + V A LF DL P R VL +G++E G
Sbjct: 212 YILSADLVSARRLF------DLAPERDV---VLWNIMVSGYIEGG 247
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 296/552 (53%), Gaps = 24/552 (4%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD + ++V WN+++ G+A+ +LF M + D T+ L++ +
Sbjct: 80 VFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGA 139
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L KS+H I IG +D V N+ +S Y KC + + + VF E +R SWN ++
Sbjct: 140 LFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVF--DEMTIRNSGSWNVLI 197
Query: 217 AG------CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ---GRLVH 267
AG C + + ++ F + M + R D T+ SLL +C + GR +H
Sbjct: 198 AGYAVSGNCNFRE---ETWEFVKQMQMDEVRPDAYTISSLLP--LCDGDKGKWDYGRELH 252
Query: 268 SHGIH----YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ + G D DV + LI MYS+ + R +FD + R SWTAMI+GY +
Sbjct: 253 CYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVEN 312
Query: 324 GDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
GD DEAL LF M+ G P+ V+++S++ C L G+ +A L + V +
Sbjct: 313 GDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSL 372
Query: 383 CNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
CNALIDMYSKCGS+ AR +F K +SW++MI+G L+G+ EA+ L+ ++++
Sbjct: 373 CNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAG 432
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+RP+ +T + +L AC+ +G + +G I +D GI P L+ ++C+ D+LGR G+L
Sbjct: 433 IRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGI--EPTLEIFACIVDMLGRAGQLD 490
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
ALDF+++MP++ +WG L+ IH ++E+ E L +LEP + + YV ++N YA
Sbjct: 491 PALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYA 550
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
RWD VA +R MMK +++K PG S IN KT F D+ H + Y +LD L L
Sbjct: 551 SSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNMLDDLLL 610
Query: 622 HSREEAYSSHLK 633
+ S HL+
Sbjct: 611 TMNDAICSPHLE 622
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 221/450 (49%), Gaps = 32/450 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ LF QM +D+ P++ T ++K ++L L + IHG +
Sbjct: 92 WNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSI 151
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG---FLEN 124
+ FV KC + + K+FDEM +R+ SWN ++ G+A G F E
Sbjct: 152 RIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREE 211
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIH----IGVDADVSVC 179
M++ ++ D T+ L K + +H + + +G+D+DV +
Sbjct: 212 TWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLG 271
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM-MYN 238
I Y++ + + + VF + + R V SW +M+ G D++L+ +R M + +
Sbjct: 272 CCLIDMYSRSNKVVVGRRVFDRM--KCRNVFSWTAMINGYVENGDSDEALSLFRDMQVID 329
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + ++VS+L + L+ GR +H + + +VS+ N LI MYSKCG +DSA
Sbjct: 330 GIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSA 389
Query: 299 RVLF--DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
R +F D +C + +SW++MISGY G EA+ L+ M AG PD++T + ++S C
Sbjct: 390 RRVFEDDSLC-KDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACS 448
Query: 357 QSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSW 414
+SG + G + + G++ + + ++DM + G + A + A+P E W
Sbjct: 449 RSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVW 508
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+++ ++G+ +E +L ++ + + L P
Sbjct: 509 GALVSCSIIHGD-LEMQELAYRFL-IQLEP 536
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 186/404 (46%), Gaps = 21/404 (5%)
Query: 140 DFVTVMGLTQA---AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
+F + L Q+ ++ K L L + HS + +G+ + + I +YA C +
Sbjct: 19 EFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSR 78
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
LVF ++ + V WNS++ G ++++ + M + D T+ +L S V
Sbjct: 79 LVFDSLQH--KNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTL--SKVS 134
Query: 257 PE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
E AL G+ +H I GF D V N+++SMY KCG+ + +R +FD + R SW
Sbjct: 135 SELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWN 194
Query: 315 AMISGYAQKGDL---DEALRLFFAMEAAGELPDLVTVLSMISGC-GQSGALELGKWFDNY 370
+I+GYA G+ +E M+ PD T+ S++ C G G + G+ Y
Sbjct: 195 VLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCY 254
Query: 371 ACSG----GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
GL +V + LIDMYS+ + R +F + + V SWT MI G NG+
Sbjct: 255 IVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGD 314
Query: 427 FVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL LF + +D + PNRV+ ++VL AC+ L G I + N E+
Sbjct: 315 SDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKE---LNNEVS 371
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G L A + + DA W +++ +H
Sbjct: 372 LCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLH 415
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+L+L + + S GL N ++ LI Y+ C +R +F +L K V W ++I
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI---SI-IQYDD 475
G A N + EA LF+Q+ D+ P+ T + + + G L G +I SI I +
Sbjct: 98 GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVS 157
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
+ N + Y + G +E+ M I+ ++G W L+ + N
Sbjct: 158 DTVVANSIMSMYC-------KCGNFEESRKVFDEMTIR-NSGSWNVLIAGYAVSGNCNFR 209
Query: 536 E 536
E
Sbjct: 210 E 210
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 303/601 (50%), Gaps = 35/601 (5%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
I AC + + + + + S + K R+ +FD M RD SWN+++ G+A
Sbjct: 60 IPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGC 119
Query: 120 GFLENVLRLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
G + ++ YN+ L + +T L A + L + +H + G + V
Sbjct: 120 GLIYQSVKA-YNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYV 178
Query: 177 SVCNTWISSYAKCDDLKMAELVF--------------------CG---------IEERLR 207
V + + Y+K + A VF CG E R R
Sbjct: 179 FVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRER 238
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+SW SM+ G T D+++ +R M ++D T S+L++ AL +G+ VH
Sbjct: 239 DSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVH 298
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
++ I + ++ V + L+ MY KC +I SA +F + + VSWTAM+ GY Q G +
Sbjct: 299 AYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSE 358
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EA++ F M+ G PD T+ S+IS C +LE G F A + GL + V NAL+
Sbjct: 359 EAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALV 418
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
+Y KCGSI D+ LF + K V+WT +++G A G+ E + LF ++ L+P++V
Sbjct: 419 TLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKV 478
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
TF+ VL AC+ G +EKG I ++ GI P DHY+CM DL R G+++EA +F+
Sbjct: 479 TFIGVLSACSRAGLVEKGNQIFESMINEHGIV--PIQDHYTCMIDLFSRAGRIEEARNFI 536
Query: 508 QSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWD 567
MP DA W TLL +C+ + N++IG++ A L +L+PH+ A YV +++ YA G+W+
Sbjct: 537 NKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWE 596
Query: 568 GVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEA 627
VA +R M+ ++K PG S + F+A+D+ + S+ Y L+ L +E
Sbjct: 597 EVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEG 656
Query: 628 Y 628
Y
Sbjct: 657 Y 657
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 212/469 (45%), Gaps = 51/469 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQND--IEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WNS I ++++ + M +ND N +TF + +K + + IHGH
Sbjct: 109 WNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGH 168
Query: 80 IVK----------SPFV----KCDRLDCAYKIFD-------------------------- 99
+VK SP V K + CA K+FD
Sbjct: 169 VVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDS 228
Query: 100 -----EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
EM RD SW +M+ GF Q G + + +F M+L +Q D T + A
Sbjct: 229 KRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGV 288
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
L K VH++ I ++ V + + Y KC ++K AE VF + + VVSW +
Sbjct: 289 MALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMT--CKNVVSWTA 346
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M+ G ++++ + M G D T+ S++SS +L +G H+ + G
Sbjct: 347 MLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSG 406
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
++V N L+++Y KCG I+ + LF+ I + V+WTA++SGYAQ G +E + LF
Sbjct: 407 LISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFE 466
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+M A G PD VT + ++S C ++G +E G + F++ G+ +ID++S+
Sbjct: 467 SMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRA 526
Query: 394 GSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
G I +AR +P +SW T+++ C G LMELD
Sbjct: 527 GRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELD 575
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 133/325 (40%), Gaps = 79/325 (24%)
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+ + +HSH I + ++N LIS Y+K G I A +FD + SW ++S
Sbjct: 25 FTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSA 84
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS---GCG-------------------- 356
Y++ G + E LF AM D V+ S+IS GCG
Sbjct: 85 YSKLGRVSEMEYLFDAMPRR----DGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFN 140
Query: 357 --------------QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
+ G ++LG+ + G V V + L+DMYSK G I AR++
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200
Query: 403 FYALPEKIVV-------------------------------SWTTMIAGCALNGEFVEAL 431
F LPEK VV SWT+MI G NG +A+
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAI 260
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSC 489
D+F ++ +L+ ++ TF +VL AC L++G + II+ D Y + S
Sbjct: 261 DIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-----YKDNIFVASA 315
Query: 490 MADLLGRKGKLKEALDFVQSMPIKS 514
+ D+ + +K A + M K+
Sbjct: 316 LVDMYCKCKNIKSAEAVFKKMTCKN 340
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/493 (35%), Positives = 271/493 (54%), Gaps = 14/493 (2%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L + H L+ K +H+ ++ D+ + NT ++ YAKC DL A +F E
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLF--DEMSS 78
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL--SSFVCPEALVQGR 264
R VV+W +++ G + D+ D+L M+ G + + T+ SLL +S V ++QGR
Sbjct: 79 RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H + YG+D +V V ++ MY++C ++ A+++FD + + VSW A+I+GYA+KG
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
D+A LF M P T S++ C G+LE GKW G K V N
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
L+DMY+K GSI DA+++F L ++ VVSW +M+ G + +G AL F +++ + P
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP 318
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKE 502
N +TFL VL AC+H G L++G Y D YN P++ HY M DLLGR G L
Sbjct: 319 NDITFLCVLTACSHAGLLDEG-----RHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDR 373
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A+ F+ MPIK A +WG LL AC++H N+E+G Y A C+F+L+ H +V + N YAL
Sbjct: 374 AIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYAL 433
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
GRW+ A +R MMK + VKK P S + + F A+D H + + + + ++
Sbjct: 434 AGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDK 493
Query: 623 SREEAY---SSHL 632
+E Y SSH+
Sbjct: 494 IKEIGYVPDSSHV 506
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 195/401 (48%), Gaps = 20/401 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------V 86
L RQ +N+ + + K C L+ L ++IH ++ S F
Sbjct: 3 LIRQQCKNNAGAREICHTLL-KRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYA 61
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC L A K+FDEM+ RDV +W A++ G++Q ++ L L M +G++ + T+
Sbjct: 62 KCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLAS 121
Query: 147 LTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
L +AA +L + +H + G D++V V + YA+C L+ A+L+F +
Sbjct: 122 LLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS 181
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ VSWN+++AG + D + + +M+ + T S+L + +L QG+
Sbjct: 182 --KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGK 239
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH+ I +G L V NTL+ MY+K G I+ A+ +FD + R VSW +M++GY+Q G
Sbjct: 240 WVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHG 299
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
AL+ F M P+ +T L +++ C +G L+ G+ + + ++ +
Sbjct: 300 LGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYV 359
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN 424
++D+ + G + A + +P K + W ++ C ++
Sbjct: 360 TMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 22/301 (7%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL--SDLIYS 73
S + W + I + LLL +M + ++PN T + KA + + +D++
Sbjct: 78 SRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +HG ++ + +C L+ A IFD M ++ SWNA++ G+A+
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G + LF NM ++ T + A L K VH+ I G V
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
NT + YAK ++ A+ VF +RL R VVSWNSM+ G + +L + M+
Sbjct: 258 NTLLDMYAKSGSIEDAKKVF----DRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLR 313
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ T + +L++ L +GR Y + +S T++ + + G +D
Sbjct: 314 TRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDR 373
Query: 298 A 298
A
Sbjct: 374 A 374
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 63/111 (56%)
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+++ C L GK + +D++++ N L+++Y+KCG + AR+LF + +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
VV+WT +I G + + +AL L +++ + L+PN+ T ++L+A + G
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVG 130
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 304/589 (51%), Gaps = 23/589 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY---SQMIHG 78
WN IR + L +FR+M++ + P+N T + A A + L + IH
Sbjct: 86 WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145
Query: 79 HIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ + F + A K+F+EM RDV SW +M+ AQ G +
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
VL++ M+ GI + VT++ L A + + + V++ G++ADV + N IS
Sbjct: 206 VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALIS 265
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC L A F + R SWN+++ G + ++L + M+ +G D
Sbjct: 266 MYTKCGCLSDALEAFQAMPARYTK--SWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDG 323
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+VS+LS+ L +G VHS+ G D + N+LI+MY+KCGD+ +A +F
Sbjct: 324 ITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQT 383
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + VSWT M+ GY + A LF M+ A + + ++S++S C Q GAL+ G
Sbjct: 384 MTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG 443
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ +Y + ++ + +AL+DMY+KCG I A E+F + K +SW MI G A N
Sbjct: 444 REIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASN 503
Query: 425 GEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
G EA++LF Q++EL D +P+ +T AVL AC H G +++G Y + P+
Sbjct: 504 GYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYF---YLMSSLGVVPD 560
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
+HY C+ DLLGR G L EA F++ MPI+ + IWG+LL AC++H +++G+ + +
Sbjct: 561 TEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIV 620
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
+ P+ +V ++N +A +WD V ++R +M ++K PG S +
Sbjct: 621 NVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 211/423 (49%), Gaps = 19/423 (4%)
Query: 63 ACAKLSDL--IYSQMIHGHIVKSPFV----------KCDRLDCAY--KIFDEMAVRDVAS 108
ACA + L ++ +++ H+ FV R D Y K+FD MA +
Sbjct: 26 ACASRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFV 85
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL---SLLKSVHS 165
WN M+ G++ + L +F MR G+ D T+ + A+ L S ++H+
Sbjct: 86 WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
IG +DV V + ++ Y +K A VF + ER VVSW SM++ C +
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYER--DVVSWTSMISACAQCGHW 203
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D L M G + T++SLLS+ +A+ +GR V++ +G + DV + N L
Sbjct: 204 DKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNAL 263
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
ISMY+KCG + A F + R SW +I G+ Q + EALR+F M G PD
Sbjct: 264 ISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDG 323
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T++S++S C Q G L G +Y G+ + ++ N+LI+MY+KCG + A +F
Sbjct: 324 ITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQT 383
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ +K VVSWT M+ G +F A +LF ++ ++ + + +++L AC+ G L+KG
Sbjct: 384 MTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG 443
Query: 466 WAI 468
I
Sbjct: 444 REI 446
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/592 (31%), Positives = 312/592 (52%), Gaps = 21/592 (3%)
Query: 40 LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPF 85
L R + ++P+ TFP + + C + DL + +H H+V+ + +
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMY 241
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
VKC + A +FD M RD+ SWNAM+ G+ + G L+LF+ MR + + D +T+
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLT 301
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ A L + +H++ I G D+SVCN+ Y + AE +F ++
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMD-- 359
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ +VSW +M++G Y + +++ YR M + + D TV ++LS+ L G
Sbjct: 360 CKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H I V V N LI+MYSKC ID A +F I + +SWT++I+G
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
EAL F M+ + P+ +T+ + ++ C + GAL GK + G+ + + NA
Sbjct: 480 CFEALIFFRQMKMTLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY +CG + A F + +K V SW ++ G + G+ ++LF ++++ +RP+
Sbjct: 539 LLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPD 597
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TF+++L C + + +G + + ++ G++ P L HY+C+ DLLGR G+L+EA
Sbjct: 598 EITFISLLCGCGKSQMVRQG-LMYFSKMEEYGVT--PNLKHYACVVDLLGRAGELQEAHK 654
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+Q MP+ D +WG LL AC+IH NI++GE A +F+L+ S Y+ + N YA G+
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGK 714
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
W VA +R MMK N + G S + GK F ++D+YH +++ VLD
Sbjct: 715 WREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLD 766
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 216/418 (51%), Gaps = 7/418 (1%)
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
L G G LE ++L +M+ + + D + L + + V+S +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
V + N +++ + + +L A VF + ER + SWN +V G FD+++ Y
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSER--NLFSWNVLVGGYAKQGYFDEAICLY 183
Query: 233 RHMMY-NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
M++ G + DV T +L + L +GR VH H + YG++LD+ V+N LI+MY K
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CGD+ SAR+LFD + R +SW AMISGY + G E L+LFFAM PDL+T+ S+
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSV 303
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
IS C G LG+ Y + G ++ VCN+L MY GS +A +LF + K +
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDI 363
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
VSWTTMI+G N +A+D + + + ++P+ +T AVL AC G L+ G + +
Sbjct: 364 VSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ ISY ++ + ++ + + +ALD ++P K+ W +++ +++
Sbjct: 424 AIKARLISYVIVANN---LINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLN 477
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 223/447 (49%), Gaps = 9/447 (2%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-G 136
G+ + FV+ L A+ +F +M+ R++ SWN ++ G+A+ G+ + + L++ M V G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ D T + + L+ + VH + G + D+ V N I+ Y KC D+K A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
L+F + R ++SWN+M++G + L + M D+ T+ S++S+
Sbjct: 252 LLFDRMPR--RDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
GR +H++ I GF +D+SV N+L MY G A LF + + VSWT M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTM 369
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
ISGY ++A+ + M+ PD +TV +++S C G L+ G A L
Sbjct: 370 ISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
V+V N LI+MYSKC I A ++F+ +P K V+SWT++IAG LN EAL F Q
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQ 489
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
M++ L+PN +T A L AC G L G I G+ + L + + D+ R
Sbjct: 490 -MKMTLQPNAITLTAALAACARIGALMCGKEIH-AHVLRTGVGLDDFLP--NALLDMYVR 545
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLL 523
G++ A + S K D W LL
Sbjct: 546 CGRMNIAWNQFNSQ--KKDVSSWNILL 570
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 193/611 (31%), Positives = 307/611 (50%), Gaps = 19/611 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I V + MK+ + + TF I K A Q +H IV
Sbjct: 70 WNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIV 129
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC+R++ AY +F M VR+ SWNA++ GF Q+G +
Sbjct: 130 KIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFW 189
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M+ G++ + T L K L +H I G++ ++CN +++Y+
Sbjct: 190 LLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYS 249
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C L+ A+ VF G R +V+WNSM+ DK +D+ N + M GF D+ T
Sbjct: 250 ECGLLEDAKRVFDGAVGT-RDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTY 308
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARVLFDGI 305
++S+ G+ H+ I G + V++ N LI+MY K + +++A LF +
Sbjct: 309 TCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSM 368
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ RVSW ++++G++Q G ++AL+LF M ++ E D +++ C L+LG+
Sbjct: 369 KSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQ 428
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
G N V ++LI MYSKCG I DA + F ++ ++W +++ A +G
Sbjct: 429 QIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHG 488
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ ALDLF + E +++ + VTF+AVL AC+H G +E+G + D GI P ++
Sbjct: 489 QGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIP--PRME 546
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C DL GR G L+EA + SMP + +A + TLL AC+ NIE+ VA L ++
Sbjct: 547 HYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEV 606
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP YV ++N Y RWD A++ +M+ +VKK PG S + + F AEDR
Sbjct: 607 EPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRS 666
Query: 606 HAESELTYPVL 616
H SE Y +L
Sbjct: 667 HPYSEDVYQIL 677
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 186/384 (48%), Gaps = 5/384 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L+ A K+FDEM +D +WN M+ G+ + G L +M+ G QAD T + +
Sbjct: 52 LNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKG 111
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
HA L + VHS + IG + V + + YAKC+ ++ A VF G+ +R V
Sbjct: 112 VAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMP--VRNFV 169
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SWN+++ G D + M G R++ T LL+ + +H
Sbjct: 170 SWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKI 229
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG-ICDRTRVSWTAMISGYAQKGDLDEA 329
I +G + ++ N ++ YS+CG ++ A+ +FDG + R V+W +M+ Y ++A
Sbjct: 230 IKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDA 289
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
LF M+ G PD+ T +IS C + GK F GL+++V +CNALI M
Sbjct: 290 FNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITM 349
Query: 390 YSKCG--SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
Y K S+ A LF+++ K VSW +++ G + G +AL LF + +
Sbjct: 350 YLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDY 409
Query: 448 TFLAVLQACTHTGFLEKGWAISII 471
+ AVL++C+ L+ G I ++
Sbjct: 410 AYSAVLRSCSDLAILQLGQQIHLL 433
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 9/275 (3%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARVLFDGICDRTRVSWTAM 316
AL L H G + V N ++ YSKC GD++ A LFD + + V+W M
Sbjct: 14 ALYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTM 73
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I+GY + G+L A +M+ G D T S++ G + +LG+ + G
Sbjct: 74 ITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGY 133
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ +V +AL+DMY+KC + DA ++F +P + VSW +I G G+ A L
Sbjct: 134 EQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDC 193
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ + +R TF +L F + +Q K I + E + C A L
Sbjct: 194 MQKEGVRVEDGTFAPLLTLLDGDKFYKL-----TMQLHCKIIKHGLEFYNALCNATLTAY 248
Query: 497 K--GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G L++A D W ++L A +H
Sbjct: 249 SECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVH 283
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 308/628 (49%), Gaps = 70/628 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + +K E K L MK + ++P+ +T+ + +
Sbjct: 259 WNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW---------------------NAI 297
Query: 82 KSPFVKCDRLDCAYKIFDEMA-VRD----VASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
S + + + + A K F EM ++D V SW A++ G Q G+ L +F M L G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKMA 195
++ + +T+ A + L + +H + I + +D+D+ V N+ + YAKC +++A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417
Query: 196 ------------------------------------ELVFCGIEERLRTVVSWNSMVAGC 219
E+ F GIE +++WN +V G
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP---DIITWNGLVTGF 474
Query: 220 T-YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
T YGD +L F++ M G + TT+ L++ L G+ +H + + +L
Sbjct: 475 TQYGDG-KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELS 533
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V + LISMYS C ++ A +F + R V W ++IS AQ G AL L M
Sbjct: 534 TGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNL 593
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+ + VT++S + C + AL GK + GL + N+LIDMY +CGSI
Sbjct: 594 SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQK 653
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
+R +F +P++ +VSW MI+ ++G ++A++LF + L+PN +TF +L AC+H
Sbjct: 654 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSH 713
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
+G +E+GW + + + +P ++ Y+CM DLL R G+ E L+F++ MP + +A +
Sbjct: 714 SGLIEEGWKYFKMMKTEYAM--DPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAV 771
Query: 519 WGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
WG+LL AC+IH N ++ EY A LF+LEP S+ YV MAN Y+ GRW+ A IR +MK
Sbjct: 772 WGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKE 831
Query: 579 NQVKKFPGQSLFHINGKTCTFTAEDRYH 606
V K PG S + K +F D H
Sbjct: 832 RGVTKPPGCSWIEVKRKLHSFVVGDTSH 859
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/566 (26%), Positives = 245/566 (43%), Gaps = 102/566 (18%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL-----IYSQM- 75
W + + + +T+ LF M + P++ FP + KAC++L + +Y M
Sbjct: 158 WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYML 217
Query: 76 ---------IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ G I+ F+KC R+D A + F+E+ +DV WN M+ G+ G + L
Sbjct: 218 SIGFEGNSCVKGSILDM-FIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ +M+L G++ D VT N IS Y
Sbjct: 277 KCISDMKLSGVKPDQVT-----------------------------------WNAIISGY 301
Query: 187 AKCDDLKMAELVFC---GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
A+ + A F G+++ VVSW +++AG ++L+ +R M+ G + +
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLF 302
T+ S +S+ L GR +H + I D D+ V N+L+ Y+KC ++ AR F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG-------- 354
I VSW AM++GYA +G +EA+ L M+ G PD++T +++G
Sbjct: 422 GMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGK 481
Query: 355 ---------------------------CGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
CGQ L+LGK Y ++ + V +ALI
Sbjct: 482 AALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALI 541
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
MYS C S+ A +F L + VV W ++I+ CA +G V ALDL ++ ++ N V
Sbjct: 542 SMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTV 601
Query: 448 TFLAVLQACTHTGFLEKGWAIS--IIQ--YDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
T ++ L AC+ L +G I II+ D N +D Y GR G ++++
Sbjct: 602 TMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMY-------GRCGSIQKS 654
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIH 529
MP + D W ++ +H
Sbjct: 655 RRIFDLMP-QRDLVSWNVMISVYGMH 679
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 187/424 (44%), Gaps = 57/424 (13%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRL--------------DCAYKIFDEMA 102
+ I + C KL +L +H +V + C+ L + A ++FD+M+
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
R+V SW A++ + +G E ++LFY M G++ D + +A K+ + K
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
V+ + + IG + + V + + + KC + +A F IE + V WN MV+G T
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIE--FKDVFMWNIMVSGYTSK 269
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+F +L M +G + D T
Sbjct: 270 GEFKKALKCISDMKLSGVKPDQVT-----------------------------------W 294
Query: 283 NTLISMYSKCGDIDSARVLF---DGICD--RTRVSWTAMISGYAQKGDLDEALRLFFAME 337
N +IS Y++ G + A F G+ D VSWTA+I+G Q G EAL +F M
Sbjct: 295 NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMV 354
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS-GGLKDNVMVCNALIDMYSKCGSI 396
G P+ +T+ S +S C L G+ Y L +++V N+L+D Y+KC S+
Sbjct: 355 LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV 414
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
AR F + + +VSW M+AG AL G EA++L ++ + P+ +T+ ++
Sbjct: 415 EVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGF 474
Query: 457 THTG 460
T G
Sbjct: 475 TQYG 478
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G VH+ + G D+ + + L+ +Y + G ++ AR +FD + +R SWTA++ Y
Sbjct: 108 GFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCG 167
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
GD +E ++LF+ M G PD + C + +GK +Y S G + N V
Sbjct: 168 LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCV 227
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+++DM+ KCG + AR F + K V W M++G GEF +AL + +
Sbjct: 228 KGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287
Query: 443 RPNRVTFLAVLQACTHTGFLEK 464
+P++VT+ A++ +G E+
Sbjct: 288 KPDQVTWNAIISGYAQSGQFEE 309
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 323/631 (51%), Gaps = 103/631 (16%)
Query: 41 LFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQMI-----HGHIVKSP----FVKCDR 90
LF+ M+ NDI+P +P + K+ K L+++ ++ H H V++ + K
Sbjct: 90 LFKHMQYYNDIKPYTSFYPVLIKSAGKAGMLLHAYLLKLGHSHDHHVRNAIMGIYAKYGC 149
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
++ A K+FDEM R A WN ++ G+ + G + RLF +MG ++
Sbjct: 150 IELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLF-------------CMMGESEK 196
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+V T ++ +AK +L+ A + F + ER V
Sbjct: 197 ------------------------NVITWTTMVTGHAKMRNLETARMYFDEMPER--RVA 230
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS----------------- 253
SWN+M++G +++ + M+ +G D TT V++LSS
Sbjct: 231 SWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKL 290
Query: 254 --------FVCPEALVQ-----GRLVHSHGI--HYGFDLDVSVINTLISMYSKCGDIDSA 298
+ AL+ G L + I G + N +IS Y++ GD+ A
Sbjct: 291 DRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLA 350
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LPDLVTVLSMISGCGQ 357
R LF+ + +R VSW +MI+GYAQ G+ +A++LF M ++ + PD VT++S+ S CG
Sbjct: 351 RDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGH 410
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G L LG W + +K ++ N+LI MY +CGS+ DAR F + K +VS+ T+
Sbjct: 411 LGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTL 470
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+G A +G E++ L ++ E + P+R+T++ VL AC+H G LE+GW + ++
Sbjct: 471 ISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKV----FESIK 526
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
+ P++DHY+CM D+LGR GKL+EA+ +QSMP++ AGI+G+LL A IH +E+GE
Sbjct: 527 V---PDVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHKQVELGEL 583
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A LFK+EPH++ YV ++N YAL GRW V +R M++ VKK
Sbjct: 584 AAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKK-------------T 630
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSREEAY 628
TF E+R H +S++ Y +L L + R Y
Sbjct: 631 TFIVENRPHEKSDI-YNLLAHLKVKLRRAGY 660
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 113/282 (40%), Gaps = 49/282 (17%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI-- 76
+ WN+ + A +T+ LF M + EP+ T+ + +C+ L D ++ I
Sbjct: 229 VASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVR 288
Query: 77 --------HGHIVKSPFV----KCDRLDCAYKIFDEMAV--------------------- 103
+ VK+ + KC L+ A KIF+++ V
Sbjct: 289 KLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLS 348
Query: 104 -----------RDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAA 151
R+ SWN+M+ G+AQ G ++LF M + D VT++ + A
Sbjct: 349 LARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSAC 408
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
H L L S + +S N+ I Y +C ++ A + F E + +VS
Sbjct: 409 GHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQ--EMATKDLVS 466
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
+N++++G +S+ M +G D T + +L++
Sbjct: 467 YNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTA 508
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/640 (29%), Positives = 316/640 (49%), Gaps = 43/640 (6%)
Query: 20 NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
N +++QI++ + + ++ + + P I A A + IY++ +
Sbjct: 4 NYYSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDG 63
Query: 80 IVKSPFVKCDRLDCAY----------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
I + + L AY + F+++ RD +WN ++ G++ G + ++
Sbjct: 64 IPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA- 122
Query: 130 YNMRLVGIQADF--VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
YN + ++ VT+M + + + H+SL K +H I +G ++ + V + + Y+
Sbjct: 123 YNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYS 182
Query: 188 KCDDLKMAELVFCGIEER----------------------------LRTVVSWNSMVAGC 219
K + A+ VF G+++R + VSW++M+ G
Sbjct: 183 KVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGL 242
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+++ +R M G ++D S+L + A+ GR +H+ I +
Sbjct: 243 AQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI 302
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V + LI MY KC + A+ +FD + + VSWTAM+ GY Q G EA+++F M+ +
Sbjct: 303 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRS 362
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD T+ IS C +LE G F A + GL + V N+L+ +Y KCG I D+
Sbjct: 363 GIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDS 422
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
LF + + VSWT M++ A G VEA+ LF ++++L L+P+ VT V+ AC+
Sbjct: 423 TRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRA 482
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G +EKG + ++ GI P HYSCM DL R G+++EA+ F+ MP + DA W
Sbjct: 483 GLVEKGQRYFELMINEYGIV--PSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGW 540
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
TLL AC+ N+EIG++ A L +L+PH A Y +++ YA G+WD VA +R MK
Sbjct: 541 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEK 600
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
V+K PGQS GK +F+A+D S+ Y L+ L
Sbjct: 601 NVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEEL 640
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + W + + A + + +F M+++ I+P++ T ACA +S L
Sbjct: 329 KQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGS 388
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
HG + + + KC +D + ++F+EM VRD SW AM+ +AQ G
Sbjct: 389 QFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFG 448
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
++LF M +G++ D VT+ G+ A A
Sbjct: 449 RAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRA 482
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/623 (30%), Positives = 317/623 (50%), Gaps = 23/623 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + + L ++ ++K + I P++ T + A L + Q +HG +
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + ++K R A ++FDEM VRD S+N M+ G+ ++ +E +R
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR 294
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F L + D +TV + +A H + LSL K ++++ + G + +V N I YA
Sbjct: 295 MFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA 353
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D+ A VF +E + VSWNS+++G +++ ++ MM + D T
Sbjct: 354 KCGDMITARDVFNSME--CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ L+S L G+ +HS+GI G +D+SV N LI MY+KCG++ + +F +
Sbjct: 412 LMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT 471
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
V+W +IS + GD L++ M + +PD+ T L + C A LGK
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G + + + NALI+MYSKCG + ++ +F + + VV+WT MI + GE
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEG 591
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPELD 485
+AL+ F + + + P+ V F+A++ AC+H+G +++G A ++ Y +P ++
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLAC----FEKMKTHYKIDPMIE 647
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ DLL R K+ +A +F+Q+MPIK DA IW ++L AC+ ++E E V+ + +L
Sbjct: 648 HYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
P + +N YA +WD V+ IR +K + K PG S + F++ D
Sbjct: 708 NPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDS 767
Query: 606 HAESELTYPVLDCLALHSREEAY 628
+SE Y L+ L +E Y
Sbjct: 768 APQSEAIYKSLEILYSLMAKEGY 790
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 244/461 (52%), Gaps = 17/461 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA---- 65
R+ + + WNS IR + L + +++++ + P+ TFP + KACA
Sbjct: 62 FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFD 121
Query: 66 -KLSDLIYSQMIH---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
++ DL+Y Q++ G+ + + + L A ++FDEM VRD+ SWN+++ G
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
++ G+ E L +++ ++ I D TV + A + + + +H F + GV++
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSV 241
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V V N ++ Y K A VF E +R VS+N+M+ G + ++S+ +
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVF--DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ + F+ D+ TV S+L + L + ++++ + GF L+ +V N LI +Y+KCGD+
Sbjct: 300 L-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+AR +F+ + + VSW ++ISGY Q GDL EA++LF M E D +T L +IS
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+ L+ GK + G+ ++ V NALIDMY+KCG +GD+ ++F ++ V+W
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
T+I+ C G+F L + Q+ + ++ P+ TFL L C
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 183/378 (48%), Gaps = 8/378 (2%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+++A + +L+ L+ +H+ I +G+D+ I Y+ + + VF +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP-A 68
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ V WNS++ + F ++L FY + + D T S++ + G LV
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
+ + GF+ D+ V N L+ MYS+ G + AR +FD + R VSW ++ISGY+ G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EAL ++ ++ + +PD TV S++ G ++ G+ +A G+ V+V N L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRPN 445
+ MY K DAR +F + + VS+ TMI G L E V E++ +F + ++ +P+
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG-YLKLEMVEESVRMFLENLD-QFKPD 306
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+T +VL+AC H + A I Y K + E + + D+ + G + A D
Sbjct: 307 LLTVSSVLRACGH--LRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARD 363
Query: 506 FVQSMPIKSDAGIWGTLL 523
SM K D W +++
Sbjct: 364 VFNSMECK-DTVSWNSII 380
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 308/613 (50%), Gaps = 27/613 (4%)
Query: 27 REAVNKNEAHKTLLLFR---QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS 83
R+ ++ H L+ R Q+ QN P N PFI K + L+ + +KS
Sbjct: 4 RKLLSTTHFHPIPLIVRNSIQLVQNCTTPPNP--PFIPKGPSVLATTL---------IKS 52
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
F K + A +FDEM RDV +W M+ G+ + +F M + + T
Sbjct: 53 YFGK-GLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFT 111
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC----DDLKMAELVF 199
+ + +A K LS + VH I G+D + V N + YA C DD A +VF
Sbjct: 112 ISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDD---ACMVF 168
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
GI L+ VSW +++AG T+ D L +R M+ L+ + + + +
Sbjct: 169 RGIH--LKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGS 226
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
G +H+ +GF+ ++ V+N+++ MY +C A F + R ++W +I+G
Sbjct: 227 HTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAG 286
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y ++ + E+L +F ME+ G P+ T S+++ C L G+ GL N
Sbjct: 287 Y-ERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGN 345
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ + NALIDMYSKCG+I D+ ++F + + +VSWT M+ G +G EA++LF +++
Sbjct: 346 LALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVR 405
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+RP+RV F+A+L AC+H G +++G + D IS P+ + Y C+ DLLGR GK
Sbjct: 406 SGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNIS--PDQEIYGCVVDLLGRAGK 463
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
++EA + ++SMP K D +WG L ACK H +G+ A+ + L PH A YV ++N
Sbjct: 464 VEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNI 523
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
YA G+W A +R +MKR KK G+S + +F D ++ E Y VL+ L
Sbjct: 524 YAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENL 583
Query: 620 ALHSREEAYSSHL 632
H +E Y L
Sbjct: 584 IGHMKESGYVPDL 596
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 199/441 (45%), Gaps = 22/441 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I + N ++F +M +++PN T + KAC + L Y +++HG +
Sbjct: 77 WTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAI 136
Query: 82 KSPF---------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K C +D A +F + +++ SW ++ G+ L
Sbjct: 137 KHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGL 196
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
R+F M L ++ + + +A + + +H+ G ++++ V N+ + Y
Sbjct: 197 RVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMY 256
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C A F E R +++WN+++AG + +SL + M GF + T
Sbjct: 257 CRCSCFSEANRYF--YEMNQRDLITWNTLIAGYERSNP-TESLYVFSMMESEGFSPNCFT 313
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S++++ L G+ +H I G D ++++ N LI MYSKCG+I + +F G+
Sbjct: 314 FTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS 373
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
R VSWTAM+ GY G +EA+ LF M +G PD V ++++S C +G ++ G +
Sbjct: 374 RRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLR 433
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALN 424
+F + + + ++D+ + G + +A EL ++P K W + C +
Sbjct: 434 YFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAH 493
Query: 425 GEFVEALDLFHQLMELDLRPN 445
H++ LDLRP+
Sbjct: 494 TFPNLGKLAAHRI--LDLRPH 512
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 290/547 (53%), Gaps = 47/547 (8%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
IFDE+ ++V +N M+ + + L +F NM GI D T + +A+ ++
Sbjct: 93 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 152
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
L + +H+ + +G+D +V V N IS Y KC L A C + +++ R VVSWNS
Sbjct: 153 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEA----CRVLDQMPCRDVVSWNS 208
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+VAGC +FDD+L + M G + D T+ SLL +
Sbjct: 209 LVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA--------------------- 247
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
V NT + ++ + +F + +++ VSW MI+ Y EA+ +F
Sbjct: 248 ------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFL 295
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
ME PD +++ S++ CG AL LG+ Y L+ N+++ NALIDMY+KCG
Sbjct: 296 QMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCG 355
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ ARE+F + + VVSWT+MI+ +NG+ +A+ LF ++ +L L P+ + F++VL
Sbjct: 356 CLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLS 415
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+H G L++G + ++ I P ++H+ CM DLLGR G++ EA F++ MP++
Sbjct: 416 ACSHAGLLDEGRYYFKLMTEECKIV--PRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEP 473
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
+ +WG LL AC+++ N+ IG A LF+L P + YV ++N YA GRW+ V +R+
Sbjct: 474 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRS 533
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
+MK +KK PG S F ++ + TF A D+ H +S+ Y LD +E Y
Sbjct: 534 IMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGY------ 587
Query: 635 IPEHEAG 641
+PE ++
Sbjct: 588 VPETDSA 594
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 200/437 (45%), Gaps = 55/437 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N IR VN + LL+F+ M + I+P++ T+P + KA + DL IH +V
Sbjct: 105 FNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVV 164
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ S + KC L A ++ D+M RDV SWN+++ G A+ G ++ L
Sbjct: 165 RVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALE 224
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M L+G++ D T+ L A V NT +
Sbjct: 225 VCKEMELLGLKPDAGTMASLLPA---------------------------VTNTCL---- 253
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
D++ + +F + +++VSWN M+A ++++ + M + D ++
Sbjct: 254 --DNVSFVKEMFMKLAN--KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISI 309
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + AL+ GR +H + + ++ + N LI MY+KCG ++ AR +FD +
Sbjct: 310 ASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF 369
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSWT+MIS Y G +A+ LF M+ G PD + +S++S C +G L+ G+++
Sbjct: 370 RDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYY 429
Query: 368 DNY---ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCAL 423
C + VC ++D+ + G + +A +P E W +++ C +
Sbjct: 430 FKLMTEECKIVPRIEHFVC--MVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRV 487
Query: 424 NGEFVEALDLFHQLMEL 440
+ L QL +L
Sbjct: 488 YSNMIIGLLAADQLFQL 504
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 4/199 (2%)
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+ ++ H +H L + L+ Y+ CG+ S R +FD I + V + MI Y
Sbjct: 57 LHSKICIDHDLHSNPSLGIK----LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSY 112
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+AL +F M G PD T ++ S L +G GL NV
Sbjct: 113 VNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNV 172
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V N LI MY KCG + +A + +P + VVSW +++AGCA NG+F +AL++ ++ L
Sbjct: 173 FVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELL 232
Query: 441 DLRPNRVTFLAVLQACTHT 459
L+P+ T ++L A T+T
Sbjct: 233 GLKPDAGTMASLLPAVTNT 251
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ ++ WN I +N + + + +F QM+ + ++P+ ++ + AC LS L+ +
Sbjct: 268 NKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRR 327
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++V+ + KC L+ A ++FD+M RDV SW +M+ + G
Sbjct: 328 IHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGK 387
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ + LF M+ +G+ D + + + A HA
Sbjct: 388 GRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHA 420
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+ Y+ CG R +F +P+K VV + MI N + +AL +F + + P+
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 446 RVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
T+ VL+A + + L G I ++++ G+ N + + + + G+ G L EA
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRV---GLDLNVFVG--NGLISMYGKCGCLVEA 191
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
+ MP + D W +L+ C
Sbjct: 192 CRVLDQMPCR-DVVSWNSLVAGC 213
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 257/465 (55%), Gaps = 7/465 (1%)
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
AA L + H+ + + + +D V N I+ Y+ C+ A LV
Sbjct: 101 SAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASD 160
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
VVSWN+++AG G + +L + M RLD T++++L + A+ G L H+
Sbjct: 161 VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHA 220
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ GF+++ + ++L+SMY+KCG ++ AR +F+ + +R V WT+MI+G Q G E
Sbjct: 221 LVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKE 280
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
A+ LF M+ AG D T+ +++S CGQ GAL+LG++ Y GL + V N+LID
Sbjct: 281 AVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLID 340
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRV 447
MYSKCG + A ++F+ L ++ V +WT MI G A+NG VEALDLF Q+ D + PN V
Sbjct: 341 MYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEV 400
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALD 505
FL VL AC+H G +E+G+ + YN P ++HY CM DLLGR L EA
Sbjct: 401 IFLGVLTACSHGGLVEQGYH----HFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQ 456
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F++ MP+ D +W +LL AC+ + + EY A + +LEP +V ++N YA R
Sbjct: 457 FIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLR 516
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
W V N+RT M ++ K PG S ++G F A D H E+E
Sbjct: 517 WVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETE 561
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S + WN+ I + +K L F QM + + + +T + ACA+ + +
Sbjct: 158 ASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 217
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H +V + F KC ++ A ++F+ M R+V W +M+ G Q G
Sbjct: 218 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGR 277
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ + LF +M++ G++AD T+ + + L L + +H++ G+ ++SV N+
Sbjct: 278 FKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNS 337
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
I Y+KC D+ A +F G+ + R V +W M+ G ++L+ + M
Sbjct: 338 LIDMYSKCGDVNKAYQIFHGLTK--RDVFTWTVMIMGFAMNGLCVEALDLFAQM 389
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 312/585 (53%), Gaps = 28/585 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V K+++ F++M++ + NN T + AC + + + +H I
Sbjct: 317 WTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIF 376
Query: 82 KSPFV--------------KCDRLDCAYKIFDEM-AVRDVASWNAMLVGFAQMGFLENVL 126
K+ F K +D + ++F EM + +++A W M+ FAQ G +
Sbjct: 377 KTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAV 436
Query: 127 RLFYNMRLVGIQADFV---TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LF M G++ D +V+ + + LSL + +H + + IG+ D+SV ++
Sbjct: 437 ELFQRMLQEGLRPDKFCSSSVLSIIDS------LSLGRLIHCYILKIGLFTDISVGSSLF 490
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y+KC L+ + VF + ++ VSW SM+ G + D + ++ +R M+ R D
Sbjct: 491 TMYSKCGSLEESYTVFEQMPDKDN--VSWASMITGFSEHDHAEQAVQLFREMLLEEIRPD 548
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+ + L++ +L +G+ VH + + +V V L++MYSKCG I AR +FD
Sbjct: 549 QMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFD 608
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ + + S ++++SGYAQ G +++AL LF + A D TV S+I +L++
Sbjct: 609 MLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDI 668
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G GL V V ++L+ MYSKCGSI + ++F + + ++SWT MI A
Sbjct: 669 GTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQ 728
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G+ EAL ++ + + +P+ VTF+ VL AC+H G +E+G++ + GI P
Sbjct: 729 HGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGI--EPG 786
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
HY+CM DLLGR G+LKEA F+ +MPI+ DA +WG LL ACK+H +IE+G A +
Sbjct: 787 YYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVI 846
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+LEP A YV ++N A G W+ V IR++M+ VKK PG S
Sbjct: 847 ELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWS 891
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 227/458 (49%), Gaps = 18/458 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I AV E L LF QM PN+ TF I ACA L +L + + + G ++
Sbjct: 216 WNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVI 275
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC +D A K F M +R+V SW ++ GF Q +
Sbjct: 276 KCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFH 335
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F MR VG + + T+ + A + +HS+ G D +V + I+ Y+
Sbjct: 336 FFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYS 395
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + ++E VF +E + + W M++ ++ ++ M+ G R D
Sbjct: 396 KIGVVDLSERVFREMEST-KNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCS 454
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS ++L GRL+H + + G D+SV ++L +MYSKCG ++ + +F+ + D
Sbjct: 455 SSVLSII---DSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPD 511
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW +MI+G+++ ++A++LF M PD +T+ + ++ C +LE GK
Sbjct: 512 KDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEV 571
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
YA + V+V AL++MYSKCG+I AR +F LP+K S +++++G A NG
Sbjct: 572 HGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYI 631
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+AL LFH++ DL + T +V+ A L+ G
Sbjct: 632 EDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIG 669
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 216/442 (48%), Gaps = 26/442 (5%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF-----VKCDRLD---- 92
F +M+ + +PN T+ + AC L +Y ++++ +K+ F V+ +D
Sbjct: 135 FCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAK 194
Query: 93 -CAY----KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C++ ++F ++ +V WNA++ G + L LF M + T +
Sbjct: 195 LCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSI 254
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A + L + V + I G DV V I YAKC D+ A F + +R
Sbjct: 255 LTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEF--LRMPIR 312
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VVSW ++++G D + +F++ M G +++ T+ S+L++ P + + +H
Sbjct: 313 NVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLH 372
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDID-SARVLFDGICDRTRVSWTAMISGYAQKGDL 326
S GF LD +V + LI+MYSK G +D S RV + + W MIS +AQ G
Sbjct: 373 SWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGST 432
Query: 327 DEALRLFFAMEAAGELPDLV---TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
A+ LF M G PD +VLS+I +L LG+ Y GL ++ V
Sbjct: 433 GRAVELFQRMLQEGLRPDKFCSSSVLSIID------SLSLGRLIHCYILKIGLFTDISVG 486
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
++L MYSKCGS+ ++ +F +P+K VSW +MI G + + +A+ LF +++ ++R
Sbjct: 487 SSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIR 546
Query: 444 PNRVTFLAVLQACTHTGFLEKG 465
P+++T A L AC+ LEKG
Sbjct: 547 PDQMTLTAALTACSALHSLEKG 568
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 209/483 (43%), Gaps = 37/483 (7%)
Query: 73 SQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
++++H H +K+ + K + + A ++FD+ +V SWN ++ G
Sbjct: 64 TKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCN 123
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
Q E+ R F MR G + T + A + V+S + G ++
Sbjct: 124 QNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGY 183
Query: 178 VCNTWISSYAKC----DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
V I +AK D L++ + V C VV WN++++G + +L+ +
Sbjct: 184 VRAGMIDLFAKLCSFEDALRVFQDVLC------ENVVCWNAIISGAVKNRENWVALDLFC 237
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M F + T S+L++ E L GR V I G DV V +I +Y+KC
Sbjct: 238 QMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCR 297
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
D+D A F + R VSWT +ISG+ QK D A F M GE + T+ S+++
Sbjct: 298 DMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLT 357
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVV 412
C + ++ ++ G + V +ALI+MYSK G + + +F + K +
Sbjct: 358 ACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLA 417
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA--CTHTGFLEKGWAISI 470
W MI+ A +G A++LF ++++ LRP++ +VL G L + + I
Sbjct: 418 MWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKI 477
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
+ D + S + + + G L+E+ + MP K + W +++ H
Sbjct: 478 GLFTDISVG--------SSLFTMYSKCGSLEESYTVFEQMPDKDNVS-WASMITGFSEHD 528
Query: 531 NIE 533
+ E
Sbjct: 529 HAE 531
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 302/609 (49%), Gaps = 52/609 (8%)
Query: 62 KACAKLSDL--IYSQMIHGHIVKSPFV-----------KCDRLDCAYKIFDEMAVRDVAS 108
+AC ++ + I++QMI ++ F + LD KI + A +V S
Sbjct: 62 EACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFS 121
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
WN + G+ + N + L+ NM G D T L + +
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
I +G D+D+ V N I C +L A +F E +R +VSWNS++ G D+
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLF--DESCVRDLVSWNSIINGYVRCGLADE 239
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+ + Y M D T++ ++S+ E L GR +H G +L V + N L+
Sbjct: 240 AFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMD 299
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD-------------------- 327
MY KC +I++A++LF+ + +T VSWT M+ GYA+ G L+
Sbjct: 300 MYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNAL 359
Query: 328 -----------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
EAL LF M+A+ PD +TV++ +S C Q GAL++G W +Y L
Sbjct: 360 IGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNL 419
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
NV + AL+DMY+KCG+I A ++F +P + ++WT +I G AL+G+ A+ F +
Sbjct: 420 TMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSE 479
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
++ + L P+ +TF+ VL AC H G +++G GIS P+L HYSC+ DLLGR
Sbjct: 480 MISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGIS--PKLKHYSCLVDLLGR 537
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G L+EA + ++SMP + DA +WG L +IH N+ +GE A L +L+PH YV +
Sbjct: 538 AGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLL 597
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
AN Y W+ +R MM+ V+K PG S +NG F D+ H +SE Y
Sbjct: 598 ANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIY--- 654
Query: 617 DCLALHSRE 625
+CL +R+
Sbjct: 655 ECLTRLTRQ 663
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 218/466 (46%), Gaps = 46/466 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN IR V +LL+R M ++ P+N T+P + K CA S + I GH+
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
++ F V C L A K+FDE VRD+ SWN+++ G+ + G +
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L+Y M + + D VT++G+ A+ ++L+L + +H +G++ V + N + Y
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMY 301
Query: 187 AKCDDLKMAELVFCGIEERL-----------------------------RTVVSWNSMVA 217
KC +++ A+++F + ++ + VV WN+++
Sbjct: 302 IKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIG 361
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G + ++L + M + D TVV+ LS+ AL G +H + + +
Sbjct: 362 GFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM 421
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+V++ L+ MY+KCG+I A +F+ + R ++WTA+I G A G A+ F M
Sbjct: 422 NVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMI 481
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G +PD +T + ++S C G ++ G+ +F G+ + + L+D+ + G +
Sbjct: 482 SIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFL 541
Query: 397 GDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+A EL ++P E V W + G ++G +L+ELD
Sbjct: 542 EEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELD 587
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 276/545 (50%), Gaps = 28/545 (5%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLL-KSVH 164
W + A G + + LF MR A +V AA+ A LS L S+H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMR--ASAAPRSSVPASLPAALKSCAALGLSALGASLH 73
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCD------------DLKMAELVFCGIEERL-----R 207
+ I G AD N ++ Y K D+ + F + + R
Sbjct: 74 ALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIER 133
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VVSWN++V GC + ++L F R M GFR D T+ ++L F + +G VH
Sbjct: 134 DVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVH 193
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
GFD DV V ++LI MY+ C D + +FD + R + W ++++G AQ G ++
Sbjct: 194 GFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVE 253
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EAL +F M AG P VT S+I CG +L GK Y GG +DNV + ++LI
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLI 313
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
DMY KCG I A +F + VVSWT MI G AL+G EAL LF ++ + +PN +
Sbjct: 314 DMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 373
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
TFLAVL AC+H G ++KGW + GI P L+H++ +AD LGR G+L EA +F+
Sbjct: 374 TFLAVLTACSHAGLVDKGWKYFKSMSNHYGIV--PTLEHFAALADTLGRAGELDEAYNFI 431
Query: 508 QSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWD 567
M IK A +W TLL AC++H N + E VA + +LEP S +V ++N Y+ GRW+
Sbjct: 432 SKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWN 491
Query: 568 GVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEA 627
A++R M++ +KK P S + K F A DR H + ++D L S + A
Sbjct: 492 EAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDR---IIDALNAFSEQMA 548
Query: 628 YSSHL 632
H+
Sbjct: 549 REGHV 553
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 208/467 (44%), Gaps = 39/467 (8%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNL--TFPFIAKACAKLSDLI 71
Y + W QIR A + + LF +M+ + +++ + P K+CA L
Sbjct: 8 YPPPPPSSWAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSA 67
Query: 72 YSQMIHGHIVKSPF----------------VKCDRLDCA-----------------YKIF 98
+H ++S V C LD K+F
Sbjct: 68 LGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVF 127
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
DEM RDV SWN +++G A+ G L M G + D T+ + +
Sbjct: 128 DEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVK 187
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
VH F G D+DV V ++ I YA C + VF + +R + WNS++AG
Sbjct: 188 RGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLP--VRDHILWNSLLAG 245
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
C +++L +R M+ G R T SL+ +L G+ +H++ I GF+ +
Sbjct: 246 CAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDN 305
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V + ++LI MY KCG+I A +FD + VSWTAMI GYA G EAL LF ME
Sbjct: 306 VFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMEL 365
Query: 339 AGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
P+ +T L++++ C +G ++ G K+F + + G+ + AL D + G +
Sbjct: 366 GNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELD 425
Query: 398 DARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+A + K S W+T++ C ++ + A ++ ++MEL+ R
Sbjct: 426 EAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPR 472
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 321/637 (50%), Gaps = 27/637 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
++S I N K + +F Q+ Q+ + PN F + +AC K + G +
Sbjct: 123 YSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFV 182
Query: 81 VKSPF------VKCDRLD------------CAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
+K+ + V C+ +D A K+FD+M ++V +W M+ AQ G+
Sbjct: 183 LKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYN 242
Query: 123 ENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ + LF M + G D T+ GL + LSL K +HS+ I G+ D+ V +
Sbjct: 243 DEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCS 302
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF--DDSLNFYRHMMYNG 239
+ YAKC ++ A VF G+ E V+SW ++V G G +++ + +M+ G
Sbjct: 303 LVDMYAKCGLVQEARKVFDGMREH--NVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQG 360
Query: 240 -FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ T +L + G VH I G V N L+S+Y+K G ++SA
Sbjct: 361 GVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESA 420
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R FD + ++ VS T + + +L+ L +E G T S++SG
Sbjct: 421 RKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACI 480
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
G + G+ G + ++ V NALI MYSKCG+ A ++F + + V++WT++I
Sbjct: 481 GTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSII 540
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
G A +G +AL+LF+ ++E ++PN VT++AVL AC+H G +++ W D+ GI
Sbjct: 541 NGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGI 600
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
P ++HY+CM DLLGR G L EA++F+ SMP +DA +W T L +C++H N ++GE+
Sbjct: 601 V--PRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHA 658
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A + + EPH A Y+ ++N YA GRW+ VA IR MK+ Q+ K G S + +
Sbjct: 659 AKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHK 718
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
F D H +++ Y LD LAL + Y + ++
Sbjct: 719 FHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFV 755
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 161/329 (48%), Gaps = 17/329 (5%)
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
+T L + I K+ L K +H + D + N+ I+ Y+K +D A +F
Sbjct: 52 LITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQ 111
Query: 201 GIEERLRTVVSWNSMVA------GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
+E R VVS++S+++ C + D L + N + L F
Sbjct: 112 SMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGF 171
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK---CGDIDSARVLFDGICDRTRV 311
+ G ++ + FD V V LI M+ K D++SAR +FD + ++ V
Sbjct: 172 FKTGLCLFGFVLKTG----YFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVV 227
Query: 312 SWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
+WT MI+ AQ G DEA+ LF M ++G +PD T+ +IS C + L LGK ++
Sbjct: 228 TWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSW 287
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-- 428
GL ++ V +L+DMY+KCG + +AR++F + E V+SWT ++ G G
Sbjct: 288 VIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYER 347
Query: 429 EALDLF-HQLMELDLRPNRVTFLAVLQAC 456
EA+ +F + L++ + PN TF VL+AC
Sbjct: 348 EAMRMFSNMLLQGGVAPNCFTFSGVLKAC 376
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
L+T ++ C ++ LGK + + L + ++ N+LI +YSK A +F
Sbjct: 52 LITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQ 111
Query: 405 AL--PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGF 461
++ ++ VVS++++I+ A N ++A+++F QL+ D + PN F AV++AC GF
Sbjct: 112 SMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGF 171
Query: 462 LEKG 465
+ G
Sbjct: 172 FKTG 175
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 319/635 (50%), Gaps = 46/635 (7%)
Query: 36 HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL--IYSQMI-HGHIVK--------SP 84
H + + + Q P + T ++ C L L +++Q+I HG + S
Sbjct: 18 HTETQISKTILQELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSS 77
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
V+ L A+K+FD++ + +N ++ G++ L L+ M GI + T+
Sbjct: 78 SVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTI 137
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A L VH+ +G+ + V N ++ Y C + A VF I E
Sbjct: 138 PFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISE 197
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R T+VSWNSM+ G + + ++++ +R M G DV T+V LLS GR
Sbjct: 198 R--TLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGR 255
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH H + G ++D V N L+ MY+KCG++ A+ +FD + D+ VSWT MI+ YA G
Sbjct: 256 FVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHG 315
Query: 325 DLD-------------------------------EALRLFFAMEAAGELPDLVTVLSMIS 353
+D EA+ LF+ M +G + + T+++++S
Sbjct: 316 LIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILS 375
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C G L LGK +Y + + +CNA+IDMY+KCG++ A ++F+ +PEK VS
Sbjct: 376 SCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVS 435
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W +I AL+G EA+++F ++ + P+ +TF +L AC+H+G ++ G I
Sbjct: 436 WNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMN 495
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
GIS P+++HY+CM DLLGR+G L EA+ ++ MP+K D +W LL AC+ + N+
Sbjct: 496 LTFGIS--PDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLA 553
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
IG+ + L +L +++ YV ++N Y+ RWD + NI ++ +N +KK S I+
Sbjct: 554 IGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEID 613
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G F +D+ H S Y +L L H + Y
Sbjct: 614 GCCYQFMVDDKRHGASTSIYSMLGQLMDHLKSAGY 648
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 225/464 (48%), Gaps = 45/464 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N I+ N ++ K+LLL+R+M + I PN T PF+ KACA S +H
Sbjct: 102 FNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSF 161
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + +V C + A ++FD+++ R + SWN+M+ G+++MG E +
Sbjct: 162 KLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVL 221
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ VG++ D T++GL + + L + VH + G++ D V N + YA
Sbjct: 222 MFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYA 281
Query: 188 KCDDLKMAELVF-------------------------CGIE----ERLRTVVSWNSMVAG 218
KC +LK A+ VF C +E + VVSWNS++
Sbjct: 282 KCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWC 341
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ ++++ + M +G + TT+V++LSS L G+ HS+ L
Sbjct: 342 HVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLS 401
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
++ N +I MY+KCG + +A +F G+ ++ VSW +I A G EA+ +F M+A
Sbjct: 402 ATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQA 461
Query: 339 AGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+G PD +T ++S C SG ++ G+ +F+ + G+ +V ++D+ + G +G
Sbjct: 462 SGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLG 521
Query: 398 DARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+A L +P K VV W+ ++ C G + QL+EL
Sbjct: 522 EAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLEL 565
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 152/399 (38%), Gaps = 92/399 (23%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS I + + +L+FR+M++ +EP+ T + K + + +H
Sbjct: 199 TLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVH 258
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
H+V + + KC L CA +FD+M +DV SW M+ +A G ++
Sbjct: 259 LHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLID 318
Query: 124 NVLR-------------------------------LFYNMRLVGIQADFVTVMGLTQAAI 152
L LFY M G+ A+ T++ + +
Sbjct: 319 CALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCS 378
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
H L+L K HS+ + ++CN I YAKC L+ A VF G+ E + VSW
Sbjct: 379 HMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPE--KNAVSW 436
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N ++ +++ + M +G VCP+ +
Sbjct: 437 NVIIGALALHGYGKEAIEMFEKMQASG---------------VCPDEI------------ 469
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFD------GICDRTRVSWTAMISGYAQKGDL 326
L+S S G +D+ + F+ GI + M+ ++G L
Sbjct: 470 --------TFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVE-HYACMVDLLGRRGLL 520
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
EA+ L M PD+V +++ C G L +GK
Sbjct: 521 GEAISLIKKMPVK---PDVVVWSALLGACRTYGNLAIGK 556
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 305/597 (51%), Gaps = 68/597 (11%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK---SP---FVKCDRLDC-------- 93
+D P+ L+F + C + L + IH I+K SP RL
Sbjct: 31 HDFNPHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPI 87
Query: 94 ----AYKIFDEMAVRDVASWNAMLVGFAQMG--FLENVLRLFYNMRLVGIQADFVTVMGL 147
A + ++ ++ +NA++ G A +E ++ ++ M GI D T+ +
Sbjct: 88 DPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLV-VYKQMLSKGIVPDNYTIPFV 146
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+A ++ + + VH I +G+ +DV V NT + YA CD ++ A VF +R
Sbjct: 147 LKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR-- 204
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+VSW +M+ G Y M GF + + + +S V
Sbjct: 205 DLVSWTTMIQG-------------YVKM---GFAREGVGLYIIRNSNV------------ 236
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+LDV V N L+ MY KCGD + AR +F + + VSW +MISG AQKG
Sbjct: 237 --------NLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFK 288
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
E+L +F M+ G PD VT++++++ C G LELGKW Y ++ + + NAL+
Sbjct: 289 ESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALV 348
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
DMY+KCGSI A +F A+ K V S+T MI G A++G+ +ALDLF ++ ++ + P+ V
Sbjct: 349 DMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEV 408
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALD 505
TF+ VL AC+H G +E+G ++D YN P+L+HY CM DLLGR G + EA +
Sbjct: 409 TFVGVLTACSHVGLVEEGRKY----FEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEE 464
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+++MPI+ DA + G LL ACKIH +E+GE V + K+EP YV M+N Y+ R
Sbjct: 465 FIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANR 524
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
W +R MK ++K PG S ++G F D+ H + + Y +LD + H
Sbjct: 525 WRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSH 581
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 207/446 (46%), Gaps = 55/446 (12%)
Query: 15 RSSTINQWNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
R+ + +N+ IR A + N++ + L++++QM I P+N T PF+ KACA+ +
Sbjct: 100 RTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREG 159
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +HG +K + CD + A K+FD RD+ SW M+ G+ +M
Sbjct: 160 EEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKM 219
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
GF + L+ ++++ + V+ DV V
Sbjct: 220 GFAREGVGLY-----------------------------IIRNSN-------VNLDVFVG 243
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N + Y KC D A VF E ++ VVSWNSM++G +F +SL +R M G
Sbjct: 244 NALVDMYLKCGDANFARKVFQ--EMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLG 301
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D T+V++L+S L G+ VH++ D + N L+ MY+KCG ID A
Sbjct: 302 VKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQAC 361
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F + + S+TAMI G A G +AL LF M G PD VT + +++ C G
Sbjct: 362 WVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVG 421
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
+E G K+F++ + L+ + ++D+ + G I +A E +P E +
Sbjct: 422 LVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGAL 481
Query: 418 IAGCALNGEFVEALDLFHQLMELDLR 443
+ C ++G+ + ++ +++ R
Sbjct: 482 LGACKIHGKVELGESVMKKIEKIEPR 507
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 197/644 (30%), Positives = 319/644 (49%), Gaps = 51/644 (7%)
Query: 28 EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK----- 82
E N+ +A K L + N P + + A +KL ++ Y++ + + +
Sbjct: 17 ETRNQTQAKKLHCLIIKSLTN---PETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFS 73
Query: 83 -----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
S + K L +IF M RD SWN+++ G+ G + ++ + +M G+
Sbjct: 74 WNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGV 133
Query: 138 ----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLK 193
+ F T++ L + + L + +H + G A V V ++ + YAK +
Sbjct: 134 LNLNRITFSTMLLLVSS---QGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVS 190
Query: 194 MAELVFCGIEER-----------------------------LRTVVSWNSMVAGCTYGDK 224
+A VF ++ER R +SW +M+ G
Sbjct: 191 VASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGL 250
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
++++ +R M G +D T S+L++ AL +G+ +H+ I G++ +V V +
Sbjct: 251 EAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSA 310
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+ MY KC + A +F + ++ VSWTAM+ GY Q G +EA+R+F M+ G PD
Sbjct: 311 LVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPD 370
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ S+IS C +LE G F A GL + V NALI +Y KCGSI D+ +LF
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ + VSWT +++G A G+ E +DLF +++ L+P+ VTF+AVL AC+ G +E+
Sbjct: 431 EMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVER 490
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G D GI P DHY+CM DL GR G+L+EA +F+ MP D+ W TLL
Sbjct: 491 GQQYFESMLKDHGII--PFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
+C+++ N EIG++ A L +L+P + A Y+ +++ YA G+W VA +R M+ +K
Sbjct: 549 SCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKE 608
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
PG S K F+A+D+ S+ Y L+ L EE Y
Sbjct: 609 PGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGY 652
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 213/473 (45%), Gaps = 60/473 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDI-EPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I V + + + M ++ + N +TF + + + + IHG I
Sbjct: 105 WNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQI 164
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK F K + A ++FDE+ R+V +N M+ G + G +++
Sbjct: 165 VKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSK 224
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-------------------------- 160
RLF+ M+ + + GL Q + A+ + L
Sbjct: 225 RLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLR 284
Query: 161 -----KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
K +H+ I G + +V V + + Y KC ++ AE VF + + VVSW +M
Sbjct: 285 ALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMAN--KNVVSWTAM 342
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+ G ++++ + M NG D T+ S++SS +L +G H + G
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGL 402
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
++V N LI++Y KCG I+ + LFD + R VSWTA++SGYAQ G +E + LF
Sbjct: 403 ISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFER 462
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVC-----NALIDM 389
M G PD VT ++++S C ++G +E G ++F++ LKD+ ++ +ID+
Sbjct: 463 MLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESM-----LKDHGIIPFSDHYTCMIDL 517
Query: 390 YSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ + G + +A+ +P + W T+++ C L G L+ELD
Sbjct: 518 FGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELD 570
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/635 (29%), Positives = 320/635 (50%), Gaps = 31/635 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + + LF M ++ P+ AC++L DL + +H +
Sbjct: 116 WAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAI 175
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + K + + +F+ + +D+ SW +++ G AQ G + L+
Sbjct: 176 KWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQ 235
Query: 128 LFYNMRLVGI----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+F M G+ + F +V +++ L + +H + +D + +
Sbjct: 236 IFREMIAEGVHHPNEFHFGSVFRACSVVVNS--LEYGEQIHGVSVKYQLDRNSYAGCSLS 293
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YA+C++L A VF IE +VSWNS++ + +++ + M +G R D
Sbjct: 294 DMYARCNELDSARKVFYRIESP--DLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPD 351
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
TV++LL + V +AL QGR +HS+ + G DV V N+L+SMY++C D SA +F
Sbjct: 352 GITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFH 411
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
DR V+W ++++ Q L++ +LF + + D +++ +++S + G E+
Sbjct: 412 ETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEM 471
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCA 422
K YA GL + M+ N LID Y+KCGS+ DA +LF + + V SW+++I G A
Sbjct: 472 VKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYA 531
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
G EALDLF ++ L ++PN VTF+ VL AC+ G +++G I + GI P
Sbjct: 532 QFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIV--P 589
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+H SC+ DLL R G+L EA FV MP + D +W TLL A + H ++++G+ A +
Sbjct: 590 TREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGV 649
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
++P +A YV + N YA G W+ A ++ M+ + V+K PG+S + G+ F E
Sbjct: 650 LNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVE 709
Query: 603 DRYHAESELTYPVLDCLALHSREEAYSSHLKWIPE 637
DR H ES+ Y +L+ + L + Y IPE
Sbjct: 710 DRSHPESDEIYTMLEVIGLEMVKAGY------IPE 738
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 216/490 (44%), Gaps = 44/490 (8%)
Query: 64 CAKLSDLIYSQMIHGHIVKSP-------------------FVKCDRLDCAYKIFDEMAVR 104
C++L L +++H H++ S + +C D A +FD M R
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+ SW A++ AQ + + LF +M G D + A L L + VH
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR--TVVSWNSMVAGCTYG 222
+ I +D+ V N ++ Y+K + +F ER+R ++SW S++AG
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALF----ERIRDKDLISWGSIIAGLAQQ 227
Query: 223 DKFDDSLNFYRHMMYNGF----RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ D+L +R M+ G +V S V +L G +H + Y D +
Sbjct: 228 GREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVV--NSLEYGEQIHGVSVKYQLDRN 285
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+L MY++C ++DSAR +F I VSW ++I+ ++ KG L EA+ LF M
Sbjct: 286 SYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRD 345
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+G PD +TV++++ C AL G+ +Y GL +V+V N+L+ MY++C
Sbjct: 346 SGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSS 405
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A ++F+ ++ VV+W +++ C + + LF L +R++ VL A
Sbjct: 406 AMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAE 465
Query: 459 TGFLE-----KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
G+ E +A + D +S N +D Y+ + G L +A + M
Sbjct: 466 LGYFEMVKQVHAYAFKVGLVGDAMLS-NGLIDTYA-------KCGSLDDANKLFEIMGTG 517
Query: 514 SDAGIWGTLL 523
D W +L+
Sbjct: 518 RDVFSWSSLI 527
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 157/326 (48%), Gaps = 38/326 (11%)
Query: 258 EALVQGRLVHSHGIHYG-----FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
+L QGRLVH H + + + N LI+MY +CG DSARV+FDG+ DR VS
Sbjct: 56 RSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVS 115
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
W A+I+ +AQ +A+ LF +M +G +PD + S I C + G L LG+ A
Sbjct: 116 WAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAI 175
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
+++V NAL+ MYSK GS+GD LF + +K ++SW ++IAG A G ++AL
Sbjct: 176 KWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQ 235
Query: 433 LFHQLMELDL-RPNRVTFLAVLQACT-HTGFLEKGWAIS--IIQYDDKGISY-------- 480
+F +++ + PN F +V +AC+ LE G I ++Y SY
Sbjct: 236 IFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDM 295
Query: 481 ------------------NPELDHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIW 519
+P+L ++ + + KG L EA+ M ++ D
Sbjct: 296 YARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITV 355
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKL 545
LLCAC + + G + L KL
Sbjct: 356 MALLCACVGYDALHQGRSIHSYLVKL 381
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 155/375 (41%), Gaps = 51/375 (13%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + WNS I K + ++LF +M+ + + P+ +T + AC L +
Sbjct: 314 SPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRS 373
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++VK S + +C A +F E RDV +WN++L Q
Sbjct: 374 IHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQH 433
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
LE+V +LF + D +++ + A+ + ++K VH++ +G+ D + N
Sbjct: 434 LEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNG 493
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I +YAKC L A +F I R V SW+S++ G ++L+ + M G +
Sbjct: 494 LIDTYAKCGSLDDANKLF-EIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVK 552
Query: 242 LDVTTVVSLLS---------------SFVCPEALV----------------QGRLVHSHG 270
+ T V +L+ S + PE + GRL +
Sbjct: 553 PNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAK 612
Query: 271 I--HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD---RTRVSWTAMISGYAQKGD 325
F+ D+ + TL++ D+D + +G+ + ++ + + YA G+
Sbjct: 613 FVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGN 672
Query: 326 LDEALRLFFAMEAAG 340
+E RL M ++G
Sbjct: 673 WNEFARLKKDMRSSG 687
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/677 (29%), Positives = 315/677 (46%), Gaps = 66/677 (9%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA------KLSD 69
SS ++ WN I + K A + L LF M ++ P+ TF + +AC+ ++++
Sbjct: 73 SSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTE 132
Query: 70 LIYSQMIHGHIVKSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
I++++IH SP V K +D A +F+ + ++D SW AM+ G +Q G
Sbjct: 133 QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNG 192
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ + LF M + + A + L + +H F + G+ ++ VCN
Sbjct: 193 REDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCN 252
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ Y++ +L AE +F + R R +S+NS+++G D +L + M +
Sbjct: 253 ALVTLYSRWGNLIAAEQIFSKMHRRDR--ISYNSLISGLAQRGFSDRALQLFEKMQLDCM 310
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D TV SLLS+ A +G+ +HS+ I G D+ + +L+ +Y KC DI++A
Sbjct: 311 KPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F V W M+ Y Q G+L E+ +F M+ G +P+ T S++ C GA
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGA 430
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+LG+ G + NV VC+ LIDMY+K G + AR + L E+ VVSWT MIAG
Sbjct: 431 LDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG 490
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY------- 473
+ F EAL LF ++ +R + + F + + AC L +G I Y
Sbjct: 491 YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSED 550
Query: 474 ---------------------------------DDKGISYNPELDHYS---------CMA 491
+ +S+N + YS +
Sbjct: 551 LSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLF 610
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAA 551
+ + + G + + FV MPI+ DA IW TLL AC +H NIEIGE+ A L +LEP +A
Sbjct: 611 EEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSA 670
Query: 552 PYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESEL 611
YV ++N YA+ G+WD R MMK VKK PG+S + F DR H +E
Sbjct: 671 TYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQ 730
Query: 612 TYPVLDCLALHSREEAY 628
Y +D L + E Y
Sbjct: 731 IYEYIDDLNERAGEIGY 747
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 234/504 (46%), Gaps = 29/504 (5%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRL------------- 91
M++ I N T+ ++ + C L+ ++ +H I KS F D L
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 92 -DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
D A K+FD++ +V+ WN ++ G VL LF M + D T + +A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 151 AIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--R 207
K + + +H+ IH G + VCN I Y+K + +A+LVF ERL +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVF----ERLFLK 176
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VSW +M++G + + D+++ + M + S+LS+ E G +H
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ +G + V N L+++YS+ G++ +A +F + R R+S+ ++ISG AQ+G D
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
AL+LF M+ PD VTV S++S C GA GK +Y G+ ++++ +L+
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
D+Y KC I A E F + VV W M+ G E+ +F Q+ L PN+
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALD 505
T+ ++L+ CT G L+ G I Q G +N Y C + D+ + G+L A
Sbjct: 417 TYPSILRTCTSLGALDLGEQIH-TQVIKSGFQFNV----YVCSVLIDMYAKHGELDTARG 471
Query: 506 FVQSMPIKSDAGIWGTLLCACKIH 529
+Q + + D W ++ H
Sbjct: 472 ILQRLR-EEDVVSWTAMIAGYTQH 494
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 291/582 (50%), Gaps = 20/582 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W +R E+ + + L+ + ++ +++ F KAC +L DL + IH +V
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 82 KSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
K P + KC + A+K+F+++ +R+V W +M+ G+ + E L L
Sbjct: 170 KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F MR + + T L A L K H + G++ + + + Y K
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C D+ A VF E +V W +M+ G T+ +++L+ ++ M + + T+
Sbjct: 290 CGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIA 347
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+LS E L GR VH I G D +V N L+ MY+KC A+ +F+ ++
Sbjct: 348 SVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
V+W ++ISG++Q G + EAL LF M + P+ VTV S+ S C G+L +G
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 369 NYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y+ G +V V AL+D Y+KCG AR +F + EK ++W+ MI G G+
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+ +L+LF ++++ +PN TF ++L AC HTG + +G Y D ++ P H
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKD--YNFTPSTKH 584
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM D+L R G+L++ALD ++ MPI+ D +G L C +H ++GE V + L
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 644
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
P A+ YV ++N YA GRW+ +R +MK+ + K G S
Sbjct: 645 PDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 184/372 (49%), Gaps = 4/372 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD++ D W ML + V++L+ + G + D + +A +
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD 157
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +H + + D V + YAKC ++K A VF I LR VV W SM+
Sbjct: 158 LDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT--LRNVVCWTSMI 214
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
AG D ++ L + M N + T +L+ + AL QG+ H + G +
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
L ++ +L+ MY KCGDI +AR +F+ V WTAMI GY G ++EAL LF M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ P+ VT+ S++SGCG LELG+ + G+ D V NAL+ MY+KC
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQN 393
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA+ +F EK +V+W ++I+G + NG EAL LFH++ + PN VT ++ AC
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Query: 457 THTGFLEKGWAI 468
G L G ++
Sbjct: 454 ASLGSLAVGSSL 465
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 145/309 (46%), Gaps = 3/309 (0%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
L+ H G+ D+S+ +S Y K A LVF I E W M+
Sbjct: 60 LRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP--DFYLWKVMLRCY 117
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ + + Y +M +GFR D L + + L G+ +H + D
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDN 176
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V+ L+ MY+KCG+I SA +F+ I R V WT+MI+GY + +E L LF M
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
L + T ++I C + AL GKWF G++ + + +L+DMY KCG I +A
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
R +F +V WT MI G NG EAL LF ++ ++++PN VT +VL C
Sbjct: 297 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 460 GFLEKGWAI 468
LE G ++
Sbjct: 357 ENLELGRSV 365
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 308/616 (50%), Gaps = 22/616 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQND--IEPNNLTFPFIAKACAKLSDLIYSQMI 76
I W + I+ V N + + ++LF M+ D + P+ + KAC + S++ Y + +
Sbjct: 65 IVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESL 124
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H + VK+ + + +++ + ++F EM R+ +W A++ G G
Sbjct: 125 HAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 184
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L F M +D T +A + + K +H+ I G DA V V N+
Sbjct: 185 KEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSL 244
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y +C +++ +F + ER VVSW S++ + ++ + M +
Sbjct: 245 ATMYTECGEMRDGLCLFENMSER--DVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPP 302
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T ++ S+ LV G +H + G + +SV N+++ MYS CG +DSA VLF
Sbjct: 303 NEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLF 362
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
G+ R +SW+ +I GY+Q G +EA + F M +G P + S++S G LE
Sbjct: 363 QGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLE 422
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ A GL+ N V + LI+MYSKCG+I +A ++F +VS T MI G A
Sbjct: 423 GGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYA 482
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYDDKGISYN 481
+G+ EA+DLF + +++ P+ VTF++VL ACTH+G L+ G+ +++Q + +
Sbjct: 483 EHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQ---EKYNMR 539
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +HY CM DLL R G+L EA + M K D +W TLL ACK +IE G A
Sbjct: 540 PAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAER 599
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ +L+P A V +AN Y+ G + AN+R MK V K PG S I F +
Sbjct: 600 ILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVS 659
Query: 602 EDRYHAESELTYPVLD 617
DR+H SE Y +L+
Sbjct: 660 GDRFHPLSEDIYNILE 675
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 202/421 (47%), Gaps = 7/421 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV--GIQADFV 142
+ L A ++FD+M RD+ SW A++ G+ + + LF MR+V + D
Sbjct: 44 LINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTS 103
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
V + +A + +++ +S+H++ + + + V V ++ + Y + ++ + VF
Sbjct: 104 VVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFS-- 161
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R V+W +++ G + ++ + L ++ M + D T L + +
Sbjct: 162 EMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKY 221
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H+H I GFD V V N+L +MY++CG++ LF+ + +R VSWT++I Y +
Sbjct: 222 GKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNR 281
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G ++A+ F M + P+ T +M S C L G+ S GL D++ V
Sbjct: 282 IGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSV 341
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+++ MYS CG + A LF + + ++SW+T+I G + G EA F + +
Sbjct: 342 SNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGP 401
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+P ++L + LE G + + + G+ N + S + ++ + G +KE
Sbjct: 402 KPTDFALASLLSVSGNMAVLEGGRQVHALAF-CFGLEQNSTVR--STLINMYSKCGNIKE 458
Query: 503 A 503
A
Sbjct: 459 A 459
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/640 (28%), Positives = 323/640 (50%), Gaps = 30/640 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + W + I + + L LF +M+ +PN+ TF A+
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H +VK+ ++KC + A +FD+ V+ V +WN+M+ G+A G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L +FY+MRL ++ + + + + K L + +H + G D ++
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 181 TWISSYAKC----DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+ +Y+KC D L++ + + C + VVSW +M++G D +++++ + M
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGC-----VGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
G R + T +L++ ++ VH+ + ++ +V L+ Y K G ++
Sbjct: 390 RKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A +F GI D+ V+W+AM++GYAQ G+ + A+++F + G P+ T S+++ C
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 357 QSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+ A + GK F +A L ++ V +AL+ MY+K G+I A E+F EK +VSW
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+MI+G A +G+ ++ALD+F ++ + ++ + VTF+ V ACTH G +E+G I D
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
I+ P +H SCM DL R G+L++A+ +++MP + + IW T+L AC++H E+G
Sbjct: 626 CKIA--PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
A + ++P +A YV ++N YA G W A +R +M VKK PG S + K
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 743
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
T +F A DR H + Y L+ L+ ++ Y ++
Sbjct: 744 TYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV 783
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 235/515 (45%), Gaps = 46/515 (8%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------------- 86
LF + + +E + F + K A L D ++ + +H +K F+
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 139
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVT 143
K K+FDEM R+V +W ++ G+A+ + VL LF M+ G Q + F
Sbjct: 140 KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA 199
Query: 144 VMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+G L + + + L VH+ + G+D + V N+ I+ Y KC +++ A ++F
Sbjct: 200 ALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT 255
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E +++VV+WNSM++G ++L + M N RL ++ S++ + L
Sbjct: 256 E--VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGYA 321
+H + YGF D ++ L+ YSKC + A LF I C VSWTAMISG+
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF--DNYACSGGLKDN 379
Q +EA+ LF M+ G P+ T +++ E+ NY S
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS----- 428
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V AL+D Y K G + +A ++F + +K +V+W+ M+AG A GE A+ +F +L +
Sbjct: 429 -TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD-KGISYNPELDHYSCMADLL---- 494
++PN TF ++L C T S+ Q G + LD C++ L
Sbjct: 488 GGIKPNEFTFSSILNVCAATN-------ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+KG ++ A + + K D W +++ H
Sbjct: 541 AKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 180/373 (48%), Gaps = 7/373 (1%)
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
V RL A+ +FD+ RD S+ ++L GF++ G + RLF N+ +G++ D
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ + + + +H I G DVSV + + +Y K + K VF ++E
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE- 156
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR- 264
R VV+W ++++G D+ L + M G + + T + L V E V GR
Sbjct: 157 -RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG--VLAEEGVGGRG 213
Query: 265 -LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
VH+ + G D + V N+LI++Y KCG++ AR+LFD ++ V+W +MISGYA
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G EAL +F++M + S+I C L + G + +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 384 NALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+ YSKC ++ DA LF + VVSWT MI+G N EA+DLF ++ +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 443 RPNRVTFLAVLQA 455
RPN T+ +L A
Sbjct: 394 RPNEFTYSVILTA 406
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 130/254 (51%), Gaps = 4/254 (1%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL--SSFVCPEALVQGR 264
R S+ S++ G + + ++ + ++ G +D + S+L S+ +C E GR
Sbjct: 56 RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF--GR 113
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H I +GF DVSV +L+ Y K + R +FD + +R V+WT +ISGYA+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
DE L LF M+ G P+ T + + + G G GL + V N
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+LI++Y KCG++ AR LF K VV+W +MI+G A NG +EAL +F+ + +R
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 445 NRVTFLAVLQACTH 458
+ +F +V++ C +
Sbjct: 294 SESSFASVIKLCAN 307
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 7/185 (3%)
Query: 293 GDIDSARV-----LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
G + S+R+ LFD R R S+ +++ G+++ G EA RLF + G D +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD-CS 94
Query: 348 VLSMISGCGQSGALEL-GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
+ S + + EL G+ G D+V V +L+D Y K + D R++F +
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
E+ VV+WTT+I+G A N E L LF ++ +PN TF A L G +G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 467 AISII 471
+ +
Sbjct: 215 QVHTV 219
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 209/672 (31%), Positives = 324/672 (48%), Gaps = 100/672 (14%)
Query: 7 PPRLNRIYRSSTINQ----WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
PP + +ST+N + S +R + + K +L+F M+ + P+ +P + K
Sbjct: 49 PPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIK 108
Query: 63 ACAKLSDLIYSQMI---HG------HIVKSPFVKCDRLDCAYKIFDEMA--VRDVASWNA 111
+ ++ ++ HG + V + + + A K+FDE+ R VA WNA
Sbjct: 109 SAGNGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNA 168
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ G+ + LF M
Sbjct: 169 MVSGYWKWESEGQAQWLFDVMP-------------------------------------- 190
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+ +V ++ YAK DL+ A F + ER +VVSWN+M++G ++ L
Sbjct: 191 -ERNVITWTAMVTGYAKVKDLEAARRYFDCMPER--SVVSWNAMLSGYAQNGLAEEVLRL 247
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPE------ALVQGRLVHSHGIHYGFDLDVSVI--- 282
+ M+ G D TT V+++S+ C A R +H I + +++
Sbjct: 248 FDEMVNAGIEPDETTWVTVISA--CSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMY 305
Query: 283 -------------------------NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
N +IS Y++ G++DSAR LF+ + R V+W +MI
Sbjct: 306 AKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMI 365
Query: 318 SGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
+GYAQ G A+ LF M A +L PD VT++S+IS CG GALELG W + +
Sbjct: 366 AGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQI 425
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
K ++ NA+I MYS+CGS+ DA+ +F + + VVS+ T+I+G A +G VEA++L
Sbjct: 426 KLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMST 485
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ E + P+RVTF+ VL AC+H G LE+G + D P +DHY+CM DLLGR
Sbjct: 486 MKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-------PAIDHYACMVDLLGR 538
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G+L++A ++ MP++ AG++G+LL A +IH +E+GE A LF+LEP ++ ++ +
Sbjct: 539 VGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILL 598
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+N YA GRW V IR MK+ VKK G S GK F DR H S+ Y +L
Sbjct: 599 SNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 658
Query: 617 DCLALHSREEAY 628
L RE Y
Sbjct: 659 IELRKKMREAGY 670
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 198/630 (31%), Positives = 306/630 (48%), Gaps = 63/630 (10%)
Query: 64 CAKLSD--LIYSQMIHGHI-----VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
C L D ++ +M +I V + K LD A +F M RD +WN+M+ GF
Sbjct: 68 CGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGF 127
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
AQ E L F M G + + + A ++ VHS +DV
Sbjct: 128 AQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDV 187
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+ + + Y+KC ++ A+ VF + +R VVSWNS++ ++L+ ++ M+
Sbjct: 188 YIGSALVDMYSKCGNVNDAQRVFDEMGDR--NVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDI 295
+ D T+ S++S+ A+ G+ VH + + D+ + N + MY+KC I
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 296 DSARVLFDGI-------------------------------CDRTRVSWTAMISGYAQKG 324
AR +FD + +R VSW A+I+GY Q G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------D 378
+ +EAL LF ++ P + +++ C L LG + G K D
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ V N+LIDMY KCG + + +F + E+ VSW MI G A NG EAL+LF +++
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
E +P+ +T + VL AC H GF+E+G D G++ P DHY+CM DLLGR G
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA--PLRDHYTCMVDLLGRAG 543
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
L+EA ++ MP++ D+ IWG+LL ACK+H NI +G+YVA L ++EP ++ PYV ++N
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDC 618
YA G+W+ V N+R M++ V K PG S I G F +D+ H + + +LD
Sbjct: 604 MYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDI 663
Query: 619 L--------------ALHSREEAYSSHLKW 634
L +L S E YSS+L W
Sbjct: 664 LIAEMRPEQDHTEIGSLSSEEMDYSSNLLW 693
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 218/475 (45%), Gaps = 58/475 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + + L F M + N +F + AC+ L+D+ +H I
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KSPF+ KC ++ A ++FDEM R+V SWN+++ F Q G L
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISSY 186
+F M ++ D VT+ + A + + + VH + + + D+ + N ++ Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 187 AKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVA 217
AKC +K A +F + R R VVSWN+++A
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G T + +++L+ + + + ++L + L G H H + +GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 278 ------DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
D+ V N+LI MY KCG ++ ++F + +R VSW AMI G+AQ G +EAL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG---LKDNVMVCNALI 387
LF M +GE PD +T++ ++S CG +G +E G+ +F + G L+D+ ++
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY---TCMV 536
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
D+ + G + +A+ + +P + V W +++A C ++ + +L+E++
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 591
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 196/614 (31%), Positives = 302/614 (49%), Gaps = 22/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I VN L++ MK + P+ TF I K A L Q +H IV
Sbjct: 70 WNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIV 129
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC+R+ A+ +F + R+ SWNA++ GF G +
Sbjct: 130 KMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFW 189
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G++ D T L K L +H I GV D +VCN I+SY+
Sbjct: 190 LLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYS 249
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C L+ AE VF G R +V+WNSM+A D+ + + + M GF D+ T
Sbjct: 250 QCGSLEDAERVFDGAVGS-RDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTY 308
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY--SKCGDIDSARVLFDGI 305
+++S+ + G+ +H I G + V + N +I+MY S ++ A +F +
Sbjct: 309 TTIISACSHKD---NGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSM 365
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ RVSW ++++G++Q G + AL+LF M A D +++ C L+LG+
Sbjct: 366 ESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQ 425
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
G + N V ++LI MYSKCG I DAR+ F + ++W +++ A +G
Sbjct: 426 QIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHG 485
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ AL LF Q+ + ++ + +TF+A L AC+H G +E+G + D GIS P ++
Sbjct: 486 QGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGIS--PRME 543
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C DL GR G L EA ++SMP DA +W TLL AC+ +IE+ VA L +L
Sbjct: 544 HYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLEL 603
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP YV ++N Y RWD A + +M+ +VKK PG S + + F A+DR
Sbjct: 604 EPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRC 663
Query: 606 HAESELTYPVLDCL 619
H+ E Y +L+ L
Sbjct: 664 HSHFEEIYQILEQL 677
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 191/396 (48%), Gaps = 10/396 (2%)
Query: 81 VKSPFVKCDR--LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
+ S + +C L A +FDEM+ RD +WN M+ G+ G L + L+ +M+ G+
Sbjct: 40 ILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLM 99
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D T + + A L + + VHS + +G + V + + YAKC+ ++ A +V
Sbjct: 100 PDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMV 159
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F I R VSWN+++AG D + R M G RLD T LL+ +
Sbjct: 160 FKCIPR--RNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKK 217
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG-ICDRTRVSWTAMI 317
+H I +G D +V N I+ YS+CG ++ A +FDG + R V+W +M+
Sbjct: 218 FYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSML 277
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ + + A +LF M+ G PD+ T ++IS C + GK GL+
Sbjct: 278 AAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHK---DNGKSLHGLVIKRGLE 334
Query: 378 DNVMVCNALIDMY--SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
V +CNA+I MY S S+ DA +F+++ K VSW +++ G + G AL LF
Sbjct: 335 QLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFV 394
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
+ + + F AVL++C+ L+ G I ++
Sbjct: 395 HMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVL 430
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 7/300 (2%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF-CGIEERL--RTVVSWNSMVAGC 219
H I +G AD+ N +S Y +C L F C + + + R V+WN+M++G
Sbjct: 21 THCQTIKLGRSADIYATNNILSRYTRCSS---GGLTFACNLFDEMSHRDTVTWNTMISGY 77
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ Y+ M G D T S+L C L G+ VHS + G++ V
Sbjct: 78 VNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHV 137
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+ L+ MY+KC + A ++F I R VSW A+I+G+ +GD D A L ME
Sbjct: 138 YAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEE 197
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G D T +++ + +L G++ + VCNA I YS+CGS+ DA
Sbjct: 198 GVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDA 257
Query: 400 RELF-YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
+F A+ + +V+W +M+A + A LF + + P+ T+ ++ AC+H
Sbjct: 258 ERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSH 317
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 9/275 (3%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARVLFDGICDRTRVSWTAM 316
AL + H I G D+ N ++S Y++C G + A LFD + R V+W M
Sbjct: 14 ALYNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTM 73
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
ISGY G L A L+ +M++ G +PD T S++ G + L++G+ + G
Sbjct: 74 ISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGY 133
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+++V +AL+DMY+KC + DA +F +P + VSW +IAG L G+ A L
Sbjct: 134 EEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRC 193
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ E +R + TF +L T EK + +Q K I + + D+ C A +
Sbjct: 194 MEEEGVRLDDGTFSPLL-----TLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSY 248
Query: 497 K--GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G L++A D W ++L A H
Sbjct: 249 SQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAH 283
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 273/539 (50%), Gaps = 22/539 (4%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA----KHLSLLKSV 163
SW + A G + + LF MR A +V+ A+ + +L S+
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDD--------------LKMAELVFCGIEERLRTV 209
H+ + G AD N ++ Y K L+ VF + E+ V
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEK--DV 138
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWN++V GC + ++L R M +G + D T+ S+L F + +G +H
Sbjct: 139 VSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGF 198
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
GF DV V ++LI MY+ C D + +FD + R + W +M++G AQ G +DEA
Sbjct: 199 ATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEA 258
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L LF M +G P VT S+I CG +L LGK Y GG NV + ++LIDM
Sbjct: 259 LGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDM 318
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KCG++ AR +F + +VSWT MI G AL+G EAL LF ++ +L+PN +TF
Sbjct: 319 YCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITF 378
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
LAVL AC+H G ++KGW D GI P L+H++ +AD LGR GKL+EA +F+
Sbjct: 379 LAVLTACSHAGLVDKGWKYFNSMSDHYGIV--PSLEHHAALADTLGRPGKLEEAYNFISG 436
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
M IK A +W TLL ACK+H N + E VA +F LEP S ++ ++N Y+ GRW+
Sbjct: 437 MKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEA 496
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
A++R M++ ++K P S + K F A D+ H E L+ + + Y
Sbjct: 497 AHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGY 555
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 212/458 (46%), Gaps = 38/458 (8%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNN----LTFPFIAKACAKLSDLIYSQMI 76
W QIR A ++ + H + LF +M+ +D + P K+CA L +
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 77 HGHIVKSPFVKCDR-----------------------------LDCAYKIFDEMAVRDVA 107
H ++S DR L+ K+FDEM +DV
Sbjct: 81 HALALRSGAF-ADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVV 139
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SWN +++G A+ G L L M G + D T+ + + +H F
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFA 199
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
G DV V ++ I YA C + VF + +R + WNSM+AGC D+
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLP--VRDAILWNSMLAGCAQNGSVDE 257
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+L +R M+++G + T SL+ + +L+ G+ +H++ I GFD +V + ++LI
Sbjct: 258 ALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLID 317
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY KCG++ AR +FD I VSWTAMI G+A G EAL LF ME P+ +T
Sbjct: 318 MYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHIT 377
Query: 348 VLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
L++++ C +G ++ G K+F++ + G+ ++ AL D + G + +A +
Sbjct: 378 FLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGM 437
Query: 407 PEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
K S W+T++ C ++ V A ++ ++ +L+ R
Sbjct: 438 KIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPR 475
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/464 (36%), Positives = 257/464 (55%), Gaps = 7/464 (1%)
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
AA L + H+ + + + +D V N I+ Y+ C+ A LV V
Sbjct: 14 AAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDV 73
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWN+++AG G + +L + M RLD T++++L + A+ G L H+
Sbjct: 74 VSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHAL 133
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ GF+++ + ++L+SMY+KCG ++ AR +F+ + +R V WT+MI+G Q G EA
Sbjct: 134 VVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEA 193
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+ LF M+ AG D T+ +++S CGQ GAL+LG++ Y GL + V N+LIDM
Sbjct: 194 VDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDM 253
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVT 448
YSKCG + A ++F+ L ++ V +WT MI G A+NG VEALDLF Q+ D + PN V
Sbjct: 254 YSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVI 313
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDF 506
FL VL AC+H G +E+G+ + YN P ++HY CM DLLGR L EA F
Sbjct: 314 FLGVLTACSHGGLVEQGYH----HFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQF 369
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
++ MP+ D +W +LL AC+ + + EY A + +LEP +V ++N YA RW
Sbjct: 370 IKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRW 429
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
V N+RT M ++ K PG S ++G F A D H E+E
Sbjct: 430 VDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETE 473
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S + WN+ I + +K L F QM + + + +T + ACA+ + +
Sbjct: 70 ASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 129
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H +V + F KC ++ A ++F+ M R+V W +M+ G Q G
Sbjct: 130 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGR 189
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ + LF +M++ G++AD T+ + + L L + +H++ G+ ++SV N+
Sbjct: 190 FKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNS 249
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
I Y+KC D+ A +F G+ + R V +W M+ G ++L+ + M
Sbjct: 250 LIDMYSKCGDVNKAYQIFHGLTK--RDVFTWTVMIMGFAMNGLCVEALDLFAQM 301
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 34/224 (15%)
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--K 409
IS + +L++G F + L + V NALI+MYS C AR + + P
Sbjct: 12 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWAS 71
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE------ 463
VVSW T+IAG G +AL FHQ+ + +R + VT L VL AC TG ++
Sbjct: 72 DVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCH 131
Query: 464 -----KGWAIS---------------IIQYDDKGISYNPELDHYSCMADLLG--RKGKLK 501
G+ I+ +++ + + PE + + + G + G+ K
Sbjct: 132 ALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFK 191
Query: 502 EALDFVQSMPI---KSDAGIWGTLLCACKIHLNIEIGEYV-AYC 541
EA+D + M I K+D T++ +C +++G Y+ AYC
Sbjct: 192 EAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYC 235
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 267/520 (51%), Gaps = 25/520 (4%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLL-KSV 163
SW + A G + + LF MR A +V AA+ A LS L S+
Sbjct: 16 SWAHQIRMAAAQGHFRDAISLFLRMR--ACAAPRSSVPASLPAALKSCAALGLSALGASL 73
Query: 164 HSFGIHIGVDADVSVCNTWISSYAK--CDDLKMAELVFCG--------------IEERL- 206
H+ I G AD N ++ Y K C L + G +E +
Sbjct: 74 HALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMIE 133
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R VVSWN++V GC + ++L R M GFR D T+ S+L F + +G V
Sbjct: 134 RDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEV 193
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + GFD DV V ++LI MY+ C D + +FD + R + W ++++G AQ G +
Sbjct: 194 HGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSV 253
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EAL +F M G P VT S+I CG +L GK Y GG +DNV + ++L
Sbjct: 254 EEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSL 313
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY KCG I A +F + VVSWT MI G AL+G EAL LF ++ + +PN
Sbjct: 314 IDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNH 373
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TFLAVL AC+H G ++KGW D GI P L+H + +AD+LGR G+L EA +F
Sbjct: 374 ITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIV--PTLEHCAALADILGRAGELDEAYNF 431
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+ M IK A +W TLL AC++H N + E VA + +LEP S +V ++N Y+ GRW
Sbjct: 432 ISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRW 491
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
+ A++R M++ +KK P S + K F A DR H
Sbjct: 492 NEAAHLRKSMRKKGMKKDPACSWIEVKNKLHVFVAHDRSH 531
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 211/461 (45%), Gaps = 41/461 (8%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNL--TFPFIAKACAKLSDLIYSQMIHG 78
W QIR A + + LF +M+ +++ + P K+CA L +H
Sbjct: 16 SWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSALGASLHA 75
Query: 79 HIVKSPFVKCDR------------LDCAY----------------------KIFDEMAVR 104
++S DR L C+Y K+FDEM R
Sbjct: 76 LAIRSGAFA-DRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMIER 134
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
DV SWN +++G A+ G L L M G + D T+ + + VH
Sbjct: 135 DVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVH 194
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
F + G D DV V ++ I YA C + VF + +R + WNS++AGC
Sbjct: 195 GFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLP--VRDPILWNSVLAGCAQNGS 252
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+++L +R M+ G R T SL+ +L G+ +H++ I GF+ +V + ++
Sbjct: 253 VEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSS 312
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MY KCG+I A +FD +C VSWTAMI GYA G EAL LF ME P+
Sbjct: 313 LIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPN 372
Query: 345 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+T L++++ C +G ++ G K+F + + G+ + C AL D+ + G + +A
Sbjct: 373 HITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFI 432
Query: 404 YALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ K S W+T++ C ++ + A ++ ++MEL+ R
Sbjct: 433 SKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPR 473
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 271/506 (53%), Gaps = 5/506 (0%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+N ++ G E+ L LF M + + D TV ++ L + + + ++
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+ G+ AD V ++ I YA C D+ A+L+F +EE VV WN+++ + +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEEN--GVVMWNAIITAYMKNGNWME 203
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+ ++ M+ G D T+VS++++ G+ V + G + +++ LI
Sbjct: 204 VVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALID 263
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY+KCG++ AR LFDG+ R V+W+AMISGY Q EAL LF M+ A P+ VT
Sbjct: 264 MYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVT 323
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
++S++S C GALE GKW +Y L +++ AL+D Y+KCG I DA E F ++P
Sbjct: 324 MVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMP 383
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
K +WT +I G A NG EAL+LF + + + P VTF+ VL AC+H+ +E+G
Sbjct: 384 VKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRR 443
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
D GI P +HY C+ DLLGR G + EA F+++MPI+ +A IW LL +C
Sbjct: 444 HFDSMTQDYGI--KPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCA 501
Query: 528 IHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQ 587
+H N+EIGE + L P + Y+ ++N YA G+W A IR MK ++K PG
Sbjct: 502 VHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGC 561
Query: 588 SLFHINGKTCTFTAEDRYHAESELTY 613
SL ++G F AED H + + Y
Sbjct: 562 SLIELDGVVVEFFAEDSDHPQLKEIY 587
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 197/437 (45%), Gaps = 19/437 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N +R ++ L LF +M + P+ T K+C+++ L + I +
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + C + A +FD + V WNA++ + + G V+
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M VG+ D +T++ + A L K V + G+ + ++ I Y
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC +L A +F G++ R VV+W++M++G T D+ ++L + M + T
Sbjct: 266 AKCGELGKARRLFDGMQS--RDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVT 323
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+VS+LS+ AL G+ VHS+ L + + L+ Y+KCG ID A F+ +
Sbjct: 324 MVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMP 383
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +WTA+I G A G EAL LF +M A P VT + ++ C S +E G+
Sbjct: 384 VKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRR 443
Query: 367 -FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
FD+ G+K ++D+ + G I +A + +P E V W +++ CA++
Sbjct: 444 HFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVH 503
Query: 425 GEFVEALDLFHQLMELD 441
+ Q++ L+
Sbjct: 504 KNVEIGEEALKQIVSLN 520
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL +S + W++ I ++ + L LF +M+ ++EPN++T + ACA L
Sbjct: 276 RLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLG 335
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + +H +I + + KC +D A + F+ M V++ +W A++
Sbjct: 336 ALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 395
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G A G L LF +MR I+ VT +G+ A H+
Sbjct: 396 GMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHS 435
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 192/603 (31%), Positives = 301/603 (49%), Gaps = 51/603 (8%)
Query: 62 KACAKLSDLIYSQMIHGHIVK----------------SPFVKCDRLDCAYKIFDEMAVRD 105
K +K + + IH HI+K S + + A +F+ + +
Sbjct: 34 KLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPN 93
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSV 163
+ WN+M+ G + L L L + +R++ G++ + T L ++ K +
Sbjct: 94 LFIWNSMIRGLSMS--LSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--------------------CGIE 203
H+ + +G +DV + + I+ YA+ ++ A+LVF G
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211
Query: 204 ERLRT---------VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
+R R VVSWN+M+AG + ++L + M + +T+VS+LS+
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
AL G + S G ++ ++N LI MYSKCGD+ +AR LFD + +R +SW
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
MI GY EAL LF M A+G P +T LS++ C GA++LGKW Y
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN 391
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
+ + +LID+Y+KCG+I AR++F + K + SW MI G A++G+ +A +LF
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELF 451
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++ + PN +TF+ +L AC H G ++ G D IS P+ HY CM DLL
Sbjct: 452 SKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKIS--PKSQHYGCMIDLL 509
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
GR G +EA +Q+M +K D IWG+LL AC+ H +E+GE VA LF+LEP + YV
Sbjct: 510 GRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYV 569
Query: 555 EMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYP 614
++N YA G+WD VA IRT + +KK PG + ++ F D+ H +SE Y
Sbjct: 570 LLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYR 629
Query: 615 VLD 617
+L+
Sbjct: 630 MLE 632
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 146/363 (40%), Gaps = 59/363 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
WN+ I + + LLLF M++ ++ PN T + ACA+ + L + I
Sbjct: 229 WNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIE 288
Query: 81 -------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC L A ++FD+M RDV SWN M+ G+ M + L
Sbjct: 289 DRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALA 348
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G++ +T + + + H + L K +H++ S+ + I YA
Sbjct: 349 LFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYA 408
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A VF G+ +++++ SWN+M+ G + D + + M +G + T
Sbjct: 409 KCGNIVAARQVFDGM--KIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITF 466
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V +LS+ C A G +D + F +
Sbjct: 467 VGILSA--CKHA---------------------------------GLVDLGQQFFSSMVQ 491
Query: 308 RTRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
++S + MI + G +EA L ME PD S++ C G +E
Sbjct: 492 DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVK---PDGAIWGSLLGACRDHGRVE 548
Query: 363 LGK 365
LG+
Sbjct: 549 LGE 551
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 197/631 (31%), Positives = 312/631 (49%), Gaps = 19/631 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + V + + + F M+ + N++T+ I CA +HG ++
Sbjct: 214 WNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVI 273
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F KC L A K+F+ M D +WN ++ G+ Q GF +
Sbjct: 274 GSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 333
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G++ D VT + + + L K VHS+ + V DV + + I Y
Sbjct: 334 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYF 393
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D++MA +F + L V +M++G D++N +R ++ G + T+
Sbjct: 394 KGGDVEMARKIF--QQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTM 451
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + AL G+ +H + + V+V + + MY+KCG +D A F + +
Sbjct: 452 ASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSE 511
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ W +MIS ++Q G + A+ LF M +G D V++ S +S AL GK
Sbjct: 512 TDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEM 571
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y + V +ALIDMYSKCG + AR +F + K VSW ++IA +G
Sbjct: 572 HGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCA 631
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E LDLFH+++ + P+ VTFL ++ AC H G + +G + GI ++HY
Sbjct: 632 RECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIG--ARMEHY 689
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DL GR G+L EA D ++SMP DAG+WGTLL AC++H N+E+ + + L +L+P
Sbjct: 690 ACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDP 749
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV ++N +A G W V +R +MK V+K PG S +NG T F+A + H
Sbjct: 750 KNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHP 809
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWIPEH 638
ES Y +L+ L L R++ Y ++P H
Sbjct: 810 ESVEIYLILNSLLLELRKQGYVPQ-PYLPLH 839
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 202/434 (46%), Gaps = 24/434 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
WN IR LL + +M +++ P+ TFP++ KAC L+++ ++H
Sbjct: 113 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTAR 172
Query: 79 ----HI---VKSPFVK--------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
H+ V S +K CD A ++FDE+ RD WN ML G+ + G
Sbjct: 173 SLGFHVDLFVGSALIKLYADNGYICD----ARRVFDELPQRDTILWNVMLHGYVKSGDFN 228
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
N + F MR + VT + L VH I G + D V NT +
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLV 288
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y+KC +L A +F + + V+WN ++AG D++ + M+ G + D
Sbjct: 289 AMYSKCGNLFDARKLFNTMPQ--TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 346
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T S L S + +L + VHS+ + + DV + + LI +Y K GD++ AR +F
Sbjct: 347 SVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQ 406
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
TAMISGY G +A+ F + G +P+ +T+ S++ C AL+L
Sbjct: 407 QNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKL 466
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK L++ V V +A+ DMY+KCG + A E F + E + W +MI+ +
Sbjct: 467 GKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQ 526
Query: 424 NGEFVEALDLFHQL 437
NG+ A+DLF Q+
Sbjct: 527 NGKPEMAVDLFRQM 540
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 224/478 (46%), Gaps = 24/478 (5%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
+AC+ S + ++ +H I+ +V C R+ +F + + +
Sbjct: 52 RACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNAL 111
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
WN M+ G +G+ + L ++ M + D T + +A ++ L VH+
Sbjct: 112 PWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTA 171
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+G D+ V + I YA + A VF + +R + WN M+ G F++
Sbjct: 172 RSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQR--DTILWNVMLHGYVKSGDFNN 229
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
++ + M + ++ T +LS G VH I GF+ D V NTL++
Sbjct: 230 AMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVA 289
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSKCG++ AR LF+ + V+W +I+GY Q G DEA LF AM +AG PD VT
Sbjct: 290 MYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 349
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
S + +SG+L K +Y + +V + +ALID+Y K G + AR++F
Sbjct: 350 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNT 409
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
V T MI+G L+G ++A++ F L++ + PN +T +VL AC L+ G
Sbjct: 410 LVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKE 469
Query: 468 I--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ I++ + I ++ S + D+ + G+L A +F + M ++D+ W +++
Sbjct: 470 LHCDILKKQLENI-----VNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNSMI 521
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 4/174 (2%)
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S+ C + ++ + GG+ D + + ++ +Y CG I D LF+ L
Sbjct: 49 SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
+ W MI G + G F AL + +++ ++ P++ TF V++AC G L
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKAC---GGLNNVPLCM 165
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
++ + + ++ +L S + L G + +A +P + D +W +L
Sbjct: 166 VVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP-QRDTILWNVML 218
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 290/545 (53%), Gaps = 12/545 (2%)
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC RL A +FD M R+V SW A++ G Q G L LF M L G++ + T
Sbjct: 19 KCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFST 78
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+A L + + +H + G D V N+ I Y+KC + A +F + +
Sbjct: 79 NLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMP--V 136
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R ++SWN+M+AG T + +L ++ M G LD T S L + A+ +G +
Sbjct: 137 RNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQI 196
Query: 267 HSHGIHYGF--DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
H+ I GF ++ +V LI +Y KCG + AR +F I ++ +SWTA+I GYAQ+G
Sbjct: 197 HAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEG 256
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+L E++ LF + + D + SM+ ++ GK +A ++ VCN
Sbjct: 257 NLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCN 316
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+++DMY KCG I +A LF +P + V+SWT MI G +G EA+ LF ++ P
Sbjct: 317 SILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEP 376
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN---PELDHYSCMADLLGRKGKLK 501
+ VT+LAVL C+H+G +EKG +Y + SY+ ++HY+CM DLLGR G+LK
Sbjct: 377 DDVTYLAVLLGCSHSGLVEKGQ-----EYFSRLCSYHGIKARVEHYACMVDLLGRAGRLK 431
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
EA + V SMP++++ GIW TLL AC++H ++E+G+ V L +L+ + YV M+N YA
Sbjct: 432 EAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYA 491
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
G W IR ++K ++KK G+S I+ + F D H +E + +L +
Sbjct: 492 DAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMER 551
Query: 622 HSREE 626
+EE
Sbjct: 552 RMKEE 556
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 226/450 (50%), Gaps = 21/450 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ + + ++ W + + + ++LLLF +M + ++PN+ TF KAC L+
Sbjct: 30 FDRMLKRNVVS-WTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNG 88
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + IH VK+ F KC R++ A +F+ M VR++ SWNAM+ G
Sbjct: 89 LDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAG 148
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV--D 173
+ GF E L LF M+ VG D T +A + +H+F I G
Sbjct: 149 YTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYS 208
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ +V I Y KC L MA VF IEE + V+SW +++ G +S+ +R
Sbjct: 209 VNTAVAGALIDLYVKCGKLFMARRVFSHIEE--KHVISWTALILGYAQEGNLAESMELFR 266
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
+ + ++D + S++ F + QG+ +H+ I +D+SV N+++ MY KCG
Sbjct: 267 QLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCG 326
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
I+ A LF + R +SWT MI+GY + G EA+RLF M+ PD VT L+++
Sbjct: 327 MINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLL 386
Query: 354 GCGQSGALELGKWFDNYACS-GGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIV 411
GC SG +E G+ + + CS G+K V ++D+ + G + +A+ L ++P E V
Sbjct: 387 GCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANV 446
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELD 441
W T+++ C ++G+ ++ L+ LD
Sbjct: 447 GIWQTLLSACRVHGDLELGKEVGGILLRLD 476
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 109/195 (55%)
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GF D+ + N LI MY KCG + A +FD + R VSWTA++ G+ Q G+ E+L LF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M +G P+ T + + CG L++G+ + G +V N++IDMYSKC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G I +A +F +P + ++SW MIAG + G +AL LF ++ E+ + TF + L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 454 QACTHTGFLEKGWAI 468
+AC+ G +++G I
Sbjct: 182 KACSDLGAIKEGNQI 196
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 179/623 (28%), Positives = 302/623 (48%), Gaps = 21/623 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I + N++ + L+ M++ IEP+ +T + +L IH H++
Sbjct: 108 WTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVI 167
Query: 82 KSPF----VKCDRLDCAY----------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + C+ L AY ++F M +D ++N+++ G++ G E +
Sbjct: 168 KLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIE 227
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + GI+ T L AA+ + VH F + +V V N + Y+
Sbjct: 228 LFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYS 287
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D + +F + E +S+N ++ + +F +S + +R + + F
Sbjct: 288 KHDQVDEVGKLFXEMPEL--DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPF 345
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+LLS L GR +H I G + + V N L+ MY+KC A+ +FD I
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIAC 405
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
++ V WTAMIS Y QKG +E + +F M G D T S++ C ++ LG+
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G NV +AL+D Y+KCG + DA + F +PE+ VSW +I+ A NG
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDH 486
L+ F Q+++ +P+ V+FL+VL AC+H GF+E+ W + + + P+ +H
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT---QIYEVTPKREH 582
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+ M D+L R G+ EA + MP + +W ++L +C+IH N E+ + A LF +E
Sbjct: 583 YTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNME 642
Query: 547 P-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
AAPY+ M+N YA+ G+WD VA ++ M+ V+K P S I +T F+A D+
Sbjct: 643 DLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKS 702
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H E + ++ L+ ++ Y
Sbjct: 703 HPEMKKILRKINALSKEMEKKGY 725
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 214/459 (46%), Gaps = 12/459 (2%)
Query: 75 MIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL 134
MI GH+ K +L A ++FD M R SW ++ G+ Q + RL+ +MR
Sbjct: 80 MISGHL------KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRR 133
Query: 135 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
GI+ D+VT++ L + +++ +H+ I +G + ++ VCN+ + +Y K L +
Sbjct: 134 GGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYL 193
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
A +F + + V++NS++ G + ++++ + + +G + T +LLS+
Sbjct: 194 ASQLFKHMLN--KDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA 251
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
V + G+ VH + F +V V N L+ YSK +D LF + + +S+
Sbjct: 252 VGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYN 311
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
+I+ YA G E+ LF ++ +++S S L +G+ A +
Sbjct: 312 VVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITV 371
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G V NAL+DMY+KC +A+++F + K V WT MI+ G+ E +++F
Sbjct: 372 GANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVF 431
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
+ + ++ TF ++L+AC + + G + + +S + S + D
Sbjct: 432 SDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS---NVYSGSALLDTY 488
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ G + +A+ MP ++ W L+ A + N++
Sbjct: 489 AKCGCMTDAIKSFGEMPERNSVS-WNALISAYAQNGNVD 526
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 37/337 (10%)
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV-INTLISMYSKC 292
H++ GF + + S+F L +G LVH+H + ++ +N +IS + K
Sbjct: 33 HIVKTGFNPN-----TCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKF 87
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + AR LFDG+ +RT VSWT +I GY Q EA RL+ M G PD VT+++++
Sbjct: 88 GKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL 147
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
SG G+ + + G + N+MVCN+L+D Y K + A +LF + K V
Sbjct: 148 SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTV 207
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT----------GFL 462
++ +++ G + G EA++LF +L ++P+ TF A+L A GF+
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFV 267
Query: 463 EKG---WAISI-----------IQYDDKGISYN--PELD--HYSCMADLLGRKGKLKEAL 504
K W + + Q D+ G + PELD Y+ + G+ KE+
Sbjct: 268 LKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESF 327
Query: 505 DFVQSMPIK---SDAGIWGTLLCACKIHLNIEIGEYV 538
D + + + TLL LN+ +G +
Sbjct: 328 DLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQI 364
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 277/502 (55%), Gaps = 4/502 (0%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M + G++ +F + I + + VH+ I + V + I Y KC
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
L A V + ER VVSW +M++G + ++L+ + M+ +G + T ++L
Sbjct: 61 LGDARRVLDEMPER--NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL 118
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
+S GR +HS I F+ + V ++L+ MY+K G I AR +FDG+ +R V
Sbjct: 119 TSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVV 178
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
S TA+ISGYAQ G +EAL LF ++ G + VT S+++ AL+ G+ ++
Sbjct: 179 SCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV 238
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
L V++ N+LIDMYSKCGS+ +R +F ++PE+ V+SW M+ G + +G EA+
Sbjct: 239 LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 298
Query: 432 DLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
+LF + E + ++P+ VTFLAVL C+H G ++G I + K + PE++HY C+
Sbjct: 299 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD-GFEPEIEHYGCV 357
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSA 550
DL GR G+++EA +F++ MP + A IWG+LL AC++H N+ IGE+VA L ++E +A
Sbjct: 358 VDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENA 417
Query: 551 APYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
YV ++N YA GRWD V +R +MK V K PG+S ++ TF A DR H E
Sbjct: 418 GNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKE 477
Query: 611 LTYPVLDCLALHSREEAYSSHL 632
+ + L++ +E Y L
Sbjct: 478 EVFAKVRELSIKIKEAGYVPEL 499
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 192/388 (49%), Gaps = 25/388 (6%)
Query: 64 CAKLSDLIYSQMIHGHIVKS---PFV-----------KCDRLDCAYKIFDEMAVRDVASW 109
C + + Q +H H++K+ P V KC L A ++ DEM R+V SW
Sbjct: 20 CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 79
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
AM+ G++Q G+ L LF M + G + T + + + L + +HS I
Sbjct: 80 TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 139
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
++ + V ++ + YAK + A VF G+ E R VVS ++++G +++L
Sbjct: 140 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE--RDVVSCTAIISGYAQLGLDEEAL 197
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ +R + G R + T S+L++ AL GR VHSH + V + N+LI MY
Sbjct: 198 DLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMY 257
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTV 348
SKCG + +R +FD + +RT +SW AM+ GY++ G EA+ LF M+ ++ PD VT
Sbjct: 258 SKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTF 317
Query: 349 LSMISGCGQSGALELGK--WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
L+++SGC G + G +++ G + + ++D++ + G + +A E +
Sbjct: 318 LAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 377
Query: 407 P-EKIVVSWTTMIAGCALN-----GEFV 428
P E W +++ C ++ GEFV
Sbjct: 378 PFEPTAAIWGSLLGACRVHQNVHIGEFV 405
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 29/299 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + A + L LF +M + PN TF + +C S + IH ++
Sbjct: 79 WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI 138
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K ++ A ++FD + RDV S A++ G+AQ+G E L
Sbjct: 139 KTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALD 198
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF ++ G+++++VT + A L + VHS + + V + N+ I Y+
Sbjct: 199 LFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYS 258
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTT 246
KC L + +F + E RTV+SWN+M+ G + +++ ++ M N + D T
Sbjct: 259 KCGSLTYSRRIFDSMPE--RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 316
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHY-------GFDLDVSVINTLISMYSKCGDIDSA 298
+++LS C ++ R + I Y GF+ ++ ++ ++ + G ++ A
Sbjct: 317 FLAVLSG--CSHGGMEDRGLE---IFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 370
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 265/474 (55%), Gaps = 4/474 (0%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
+++ +K VH+ G+ D+ V N + AK DL A L+F +EER VSW+
Sbjct: 14 RNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEER--DPVSWSV 71
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M+ G ++ +R ++ G + D ++ ++ + L+ GRL+HS + G
Sbjct: 72 MIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNG 131
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
LD V +TL+ MY+KCG ID+A+ LFD + + V+ T MI+GYA+ G +E+ LF
Sbjct: 132 LHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFD 191
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M G +PD V ++++++ C + GA+ + +Y C+ +V + A+IDMY+KCG
Sbjct: 192 QMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCG 251
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
SI +RE+F + +K V+SW+ MI +G+ EAL+LFH ++ + PNR+TF+++L
Sbjct: 252 SIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLY 311
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+H G ++ G + + G+ P++ HY+CM DLLGR G+L +AL +++M ++
Sbjct: 312 ACSHAGLVDDGLQLFSLMSVSYGV--RPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEK 369
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
D GIW L AC+IH +++ E A L L+ + Y+ ++N YA GRW VA IR
Sbjct: 370 DEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRN 429
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+M + ++KK PG + ++ F A D H S Y +L L+ Y
Sbjct: 430 LMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGY 483
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 180/358 (50%), Gaps = 8/358 (2%)
Query: 75 MIHGHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+IH IV + + K L A+ +F++M RD SW+ M+ GF + G E + F
Sbjct: 31 IIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFR 90
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
+ G + D ++ + +A L + + +HS + G+ D VC+T + YAKC
Sbjct: 91 ELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCG 150
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
+ A+ +F + + + +V+ M+AG K ++S + M +GF D +V++
Sbjct: 151 MIDNAKQLFDRMPK--KDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTI 208
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
+++ A+ + RLVH + + LDV + +I MY+KCG IDS+R +FD + +
Sbjct: 209 VNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNV 268
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDN 369
+SW+AMI Y G EAL LF M +G +P+ +T +S++ C +G ++ G + F
Sbjct: 269 ISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSL 328
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGE 426
+ S G++ +V ++D+ + G + A L + EK W + C ++ +
Sbjct: 329 MSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQ 386
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 158/368 (42%), Gaps = 34/368 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+ I V + + FR++ + +P+N + PF+ KAC LI ++IH ++
Sbjct: 69 WSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVL 128
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC +D A ++FD M +D+ + M+ G+A+ G
Sbjct: 129 KNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWV 188
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF MR G D V ++ + A ++ + VH + DV + I YA
Sbjct: 189 LFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYA 248
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + + +F +E+ + V+SW++M+ Y + ++L + M+ +G + T
Sbjct: 249 KCGSIDSSREIFDRMEQ--KNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITF 306
Query: 248 VSLLSSFVCPEA-LVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+SLL + C A LV +L + YG DV ++ + + G +D A L +
Sbjct: 307 ISLL--YACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIEN 364
Query: 305 I-CDRTRVSWTAMISG---YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+ ++ W A + + Q ++A +L +++ P +LS I
Sbjct: 365 MEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQN--PGHYILLSNIYA------ 416
Query: 361 LELGKWFD 368
G+W D
Sbjct: 417 -NAGRWKD 423
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 294/602 (48%), Gaps = 19/602 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + + L L+ +M + P+ TFP + + C + D + +H H+
Sbjct: 164 SWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHV 223
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
++ F KC + A K+FD MAV D SWNAM+ G + E L
Sbjct: 224 LRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGL 283
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M +Q + +T+ +T A+ + K +H F + G DV+ CN+ I Y
Sbjct: 284 ELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMY 343
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ A +F +E + +SW +M++G D +L Y M + D T
Sbjct: 344 TSLGRMGDAGKIFSRMETK--DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVT 401
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S L++ C L G +H + GF V V N L+ MY+K ID A +F +
Sbjct: 402 IASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA 461
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ VSW++MI+G+ EAL F M + P+ VT ++ +S C +GAL GK
Sbjct: 462 EKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVK-PNSVTFIAALSACAATGALRSGKE 520
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y G+ V NAL+D+Y KCG A F EK VVSW M++G +G
Sbjct: 521 IHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGL 580
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL LF+Q++E+ P+ VTF+A+L AC+ G + +GW + + S P L H
Sbjct: 581 GDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGW--ELFHMMTEKFSIVPNLKH 638
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM DLL R GKL EA + + MPIK DA +WG LL C+IH ++E+GE A + +LE
Sbjct: 639 YACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELE 698
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+ A +V + + Y G+W VA +R M+ +++ G S + G T F +D H
Sbjct: 699 PNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESH 758
Query: 607 AE 608
+
Sbjct: 759 PQ 760
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 206/388 (53%), Gaps = 3/388 (0%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+ + S V+ + A+++F +M RDV SWN M+ G+ ++GFLE L L+Y M G+
Sbjct: 134 GNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ D T + + + + VH+ + G +V V N ++ YAKC D+ A
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF G+ + +SWN+M+AG + + L + M+ N + ++ T+ S+ +
Sbjct: 254 VFDGMA--VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ + +H + GF +DV+ N+LI MY+ G + A +F + + +SWTAMI
Sbjct: 312 SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SGY + G D+AL ++ ME PD VT+ S ++ C G L++G A + G
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
V+V NAL++MY+K I A E+F + EK VVSW++MIAG N EAL F +
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM 491
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ ++PN VTF+A L AC TG L G
Sbjct: 492 LG-HVKPNSVTFIAALSACAATGALRSG 518
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 196/387 (50%), Gaps = 17/387 (4%)
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
SFG+ +G N +S + ++ A VF + ER V SWN MV G
Sbjct: 128 SFGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPER--DVFSWNVMVGGYGKVGF 177
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+++L+ Y M++ G R DV T +L + GR VH+H + +GF +V V+N
Sbjct: 178 LEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNA 237
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L++MY+KCGDI +AR +FDG+ +SW AMI+G+ + + + L LF M P+
Sbjct: 238 LVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPN 297
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
L+T+ S+ G + K +A G +V CN+LI MY+ G +GDA ++F
Sbjct: 298 LMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFS 357
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLE 463
+ K +SWT MI+G NG +AL+++ LMEL ++ P+ VT + L AC G L+
Sbjct: 358 RMETKDAMSWTAMISGYEKNGFPDKALEVY-ALMELHNVSPDDVTIASALAACACLGRLD 416
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G + + + I Y + + + ++ + + +A++ + M K D W +++
Sbjct: 417 VGIKLHELAQNKGFIRY---VVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMI 472
Query: 524 CA-CKIHLNIEIGEYVAYCLFKLEPHS 549
C H + E Y Y L ++P+S
Sbjct: 473 AGFCFNHRSFEALYYFRYMLGHVKPNS 499
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 179/623 (28%), Positives = 302/623 (48%), Gaps = 21/623 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I + N++ + L+ M++ IEP+ +T + +L IH H++
Sbjct: 108 WTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVI 167
Query: 82 KSPF----VKCDRLDCAY----------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + C+ L AY ++F M +D ++N+++ G++ G E +
Sbjct: 168 KLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIE 227
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + GI+ T L AA+ + VH F + +V V N + Y+
Sbjct: 228 LFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYS 287
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D + +F + E +S+N ++ + +F +S + +R + + F
Sbjct: 288 KHDQVDEVGKLFYEMPEL--DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPF 345
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+LLS L GR +H I G + + V N L+ MY+KC A+ +FD I
Sbjct: 346 ATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIAC 405
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
++ V WTAMIS Y QKG +E + +F M G D T S++ C ++ LG+
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL 465
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ G NV +AL+D Y+KCG + DA + F +PE+ VSW +I+ A NG
Sbjct: 466 HSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNV 525
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDH 486
L+ F Q+++ +P+ V+FL+VL AC+H GF+E+ W + + + P+ +H
Sbjct: 526 DGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT---QIYEVTPKREH 582
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+ M D+L R G+ EA + MP + +W ++L +C+IH N E+ + A LF +E
Sbjct: 583 YTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNME 642
Query: 547 P-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
AAPY+ M+N YA+ G+WD VA ++ M+ V+K P S I +T F+A D+
Sbjct: 643 DLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKS 702
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H E + ++ L+ ++ Y
Sbjct: 703 HPEMKKILRKINALSKEMEKKGY 725
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 214/459 (46%), Gaps = 12/459 (2%)
Query: 75 MIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL 134
MI GH+ K +L A ++FD M R SW ++ G+ Q + RL+ +MR
Sbjct: 80 MISGHL------KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRR 133
Query: 135 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
GI+ D+VT++ L + +++ +H+ I +G + ++ VCN+ + +Y K L +
Sbjct: 134 GGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYL 193
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
A +F + + V++NS++ G + ++++ + + +G + T +LLS+
Sbjct: 194 ASQLFKHMLN--KDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA 251
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
V + G+ VH + F +V V N L+ YSK +D LF + + +S+
Sbjct: 252 VGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYN 311
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
+I+ YA G E+ LF ++ +++S S L +G+ A +
Sbjct: 312 VVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITV 371
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G V NAL+DMY+KC +A+++F + K V WT MI+ G+ E +++F
Sbjct: 372 GANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVF 431
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
+ + ++ TF ++L+AC + + G + + +S + S + D
Sbjct: 432 SDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS---NVYSGSALLDTY 488
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ G + +A+ MP ++ W L+ A + N++
Sbjct: 489 AKCGCMTDAIKSFGEMPERNSVS-WNALISAYAQNGNVD 526
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 156/337 (46%), Gaps = 37/337 (10%)
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV-INTLISMYSKC 292
H++ GF + + S+F L +G LVH+H + ++ +N +IS + K
Sbjct: 33 HIVKTGFNPN-----TCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKF 87
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + AR LFDG+ +RT VSWT +I GY Q EA RL+ M G PD VT+++++
Sbjct: 88 GKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL 147
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
SG G+ + + G + N+MVCN+L+D Y K + A +LF + K V
Sbjct: 148 SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTV 207
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT----------GFL 462
++ +++ G + G EA++LF +L ++P+ TF A+L A GF+
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFV 267
Query: 463 EKG---WAISI-----------IQYDDKGISYN--PELD--HYSCMADLLGRKGKLKEAL 504
K W + + Q D+ G + PELD Y+ + G+ KE+
Sbjct: 268 LKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESF 327
Query: 505 DF---VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
D +Q + TLL LN+ +G +
Sbjct: 328 DLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQI 364
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 307/617 (49%), Gaps = 24/617 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQND--IEPNNLTFPFIAKACAKLSDLIYSQMI 76
I W S I+ V N + + L+LF M+ D + P+ + KAC + S++ Y + +
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H + VK+ + + ++D + ++F EM R+ +W A++ G G
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L F M +D T +A + + K++H+ I G + V N+
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y +C +++ +F + ER VVSW S++ + ++ + M +
Sbjct: 251 ATMYTECGEMQDGLCLFENMSER--DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T S+ S+ LV G +H + + G + +SV N+++ MYS CG++ SA VLF
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
G+ R +SW+ +I GY Q G +E + F M +G P + S++S G +E
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ A GL+ N V ++LI+MYSKCGSI +A +F +VS T MI G A
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN- 481
+G+ EA+DLF + +++ RP+ VTF++VL ACTH+G L+ G+ ++ +YN
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHY----FNMMQETYNM 544
Query: 482 -PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P +HY CM DLL R G+L +A + M K D +W TLL ACK +IE G A
Sbjct: 545 RPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAE 604
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+ +L+P A V +AN Y+ G + AN+R MK V K PG S I F
Sbjct: 605 RILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFV 664
Query: 601 AEDRYHAESELTYPVLD 617
+ DR+H +SE Y +L+
Sbjct: 665 SGDRFHPQSEDIYNILE 681
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 216/484 (44%), Gaps = 35/484 (7%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV--GIQADFV 142
+ L A ++FD+M D+ SW +++ + + L LF MR+V + D
Sbjct: 50 LINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTS 109
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ + +A + +++ +S+H++ + + + V V ++ + Y + + + VF
Sbjct: 110 VLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFS-- 167
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R V+W +++ G + ++ + L ++ M + D T L + +
Sbjct: 168 EMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKY 227
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H+H I GF + V N+L +MY++CG++ LF+ + +R VSWT++I Y +
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +A+ F M + P+ T SM S C L G+ S GL D++ V
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSV 347
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+++ MYS CG++ A LF + + ++SW+T+I G G E F + +
Sbjct: 348 SNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT 407
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAI-----------------SIIQYDDK--------- 476
+P ++L + +E G + S+I K
Sbjct: 408 KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASM 467
Query: 477 --GISYNPELDHYSCMADLLGRKGKLKEALD-FVQSMPI--KSDAGIWGTLLCACKIHLN 531
G + ++ + M + GK KEA+D F +S+ + + D+ + ++L AC
Sbjct: 468 IFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQ 527
Query: 532 IEIG 535
+++G
Sbjct: 528 LDLG 531
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TT +SLL V E +V+ S+ + FD + S + +LI+ G++ +AR +FD
Sbjct: 16 TTSISLLQKPV-EENIVR----ISNQVMVKFDPN-SHLRSLIN----AGNLRAARQVFDK 65
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL--PDLVTVLSMISGCGQSGALE 362
+ VSWT++I Y + DEAL LF AM PD + ++ CGQS +
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ YA L +V V ++L+DMY + G I + +F +P + V+WT +I G
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
G + E L F ++ + + TF L+AC ++ G AI
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 268/513 (52%), Gaps = 6/513 (1%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKS-VHSF 166
WN L A+ L L+ M G + + F L A A L +L S H
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCA--ALSLPILGSQFHGQ 65
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+G + V IS Y K + A VF + V +N++V+G K
Sbjct: 66 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
D++ +R M G ++ T++ L+ + V P L G +H + YGFD DVSV+N I
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
+MY KCG ++ A+ LFD + + +SW AM+SGYAQ G L L+ M+ G PD V
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++ ++S C GA +G + + G N + NALI+MY++CG++ A+ +F +
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
PE+ +VSWT +I G ++G A+ LF +++ + P+ F+ VL AC+H G ++G
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG- 364
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + + P +HYSCM DLLGR G+LKEA ++SMPIK D +WG LL AC
Sbjct: 365 -LEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGAC 423
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
KIH N+E+ E + +LEP + YV ++N Y+ GV IR MMK ++KK PG
Sbjct: 424 KIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPG 483
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
S + G+ F DR H +S+ Y VL+ L
Sbjct: 484 CSYVELKGRVHPFIVGDRNHLQSDEIYRVLEEL 516
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 234/479 (48%), Gaps = 22/479 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+Q+RE + + + L L+ QM ++ PN TFPF K+CA LS I HG I
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 82 K-----SPFV---------KCDRLDCAYKIFDE--MAVRDVASWNAMLVGFAQMGFLENV 125
K PFV K +D A K+F+E + + +NA++ G+ +
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF M G+ + VT++GL A + +L L S+H + G D+DVSV N +I+
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC + A+ +F E ++ ++SWN+MV+G + L YR+M NG D
Sbjct: 188 YMKCGSVNYAQKLF--DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+V +LSS A G V GF + + N LI+MY++CG++ A+ +FDG+
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG- 364
+RT VSWTA+I GY G + A++LF M +G PD + ++S C +G + G
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 365
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCAL 423
++F + L+ + ++D+ + G + +A+ L ++P K W ++ C +
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ A F +++EL+ P + + +L KG I +K + +P
Sbjct: 426 HKNVELAELAFERVIELE--PENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 482
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 180/592 (30%), Positives = 301/592 (50%), Gaps = 31/592 (5%)
Query: 49 DIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCA 94
DI P+ +AC + ++ +M+H ++ F K R+ +
Sbjct: 159 DIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDS 218
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
K+F+ + R+ SWNAM+ GF G F M I+ + + +++A
Sbjct: 219 CKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQL 278
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF------CGIEERLRT 208
+ + ++ IG+ +++ V I +AKC + + VF CG+
Sbjct: 279 GDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVN----- 333
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
+ WN+M++G T ++++ + M N + DV T S L+S +L + +H
Sbjct: 334 -LPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHG 392
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
G + VS+ N L+ Y+KCG++D+ R LFD + ++SWT +++ Y+Q + ++
Sbjct: 393 MIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWED 451
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL +F M G P+ VT +++ C +LE G+ + C G + V + LID
Sbjct: 452 ALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLID 511
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRV 447
MY+KCGS+ DA ++F +L + V+SWT MI+G A +G +AL+LF + MEL L PN
Sbjct: 512 MYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRK-MELVLPNPNSA 570
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
TFL +L AC+H G +++G + + G+ PE++HY+C+ D+LGR G+L EA F+
Sbjct: 571 TFLCLLFACSHGGLVDEGLRYFHLMEERYGLV--PEIEHYACVVDILGRVGRLTEAWKFI 628
Query: 508 QSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWD 567
MPI+ D +W TLL AC++H NI++ + A + P A V ++N Y G +
Sbjct: 629 MKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIE 688
Query: 568 GVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
G N+R MMK ++K G S I GK F + D+YH + + Y L+ L
Sbjct: 689 GGLNVRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTLNVL 740
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 201/428 (46%), Gaps = 8/428 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC A ++FDE+ + V SW ++VG + GF + + F + I D +
Sbjct: 108 YSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYAL 167
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
QA I + + + VH+ I G + V + + YAK + + VF +E
Sbjct: 168 SAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLEN 227
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R + VSWN+M++G + ++ N + M+ R +V +S+ + + +GR
Sbjct: 228 RNQ--VSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGR 285
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS--WTAMISGYAQ 322
++ G ++ V LI M++KCG + + +F V+ W AMISG+
Sbjct: 286 YINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTI 345
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +EA+ LF M D+ T S ++ +LE K G V +
Sbjct: 346 SGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSL 404
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
CNAL+D Y+KCG + R+LF E +SWTT++ + + E+ +AL +F Q+ E+
Sbjct: 405 CNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGF 464
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+PN+VTF VL +C LE G + + G + + ++ S + D+ + G +++
Sbjct: 465 QPNQVTFSGVLASCASLCSLEYGQQVHSLTC-KTGFARDKCVE--SVLIDMYAKCGSVRD 521
Query: 503 ALDFVQSM 510
A+ +S+
Sbjct: 522 AIKVFESL 529
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 195/429 (45%), Gaps = 35/429 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WN+ I V+ + F +M +I PN F ++KA +L D+ + I+
Sbjct: 233 WNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAF 292
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVAS------WNAMLVGFAQMGF 121
G + F KC + ++ +F V + + WNAM+ GF G
Sbjct: 293 EIGMQSNIHVGTALIDMFAKCGCVTESWSVF----VSNFSGCGVNLPWNAMISGFTISGH 348
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E + LF M I+ D T + + L +K +H G VS+CN
Sbjct: 349 GEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSLCNA 407
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ +YAKC +L +F EE + +SW ++V + +++D+L+ + M GF+
Sbjct: 408 LMDAYAKCGELDAMRKLFDTWEESNQ--ISWTTLVTAYSQSSEWEDALSVFSQMREMGFQ 465
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T +L+S +L G+ VHS GF D V + LI MY+KCG + A +
Sbjct: 466 PNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKV 525
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + D +SWTAMISGYAQ G +AL LF ME P+ T L ++ C G +
Sbjct: 526 FESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLV 585
Query: 362 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP----EKIVVSWTT 416
+ G ++F GL + ++D+ + G + +A + +P EK+ W+T
Sbjct: 586 DEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKV---WST 642
Query: 417 MIAGCALNG 425
++ C ++G
Sbjct: 643 LLGACRVHG 651
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 166/326 (50%), Gaps = 6/326 (1%)
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSV-CNTWISSYAKCDDLKMAELVF 199
+++ L + + + L KS+H F I ++ ++V N + +Y+KC D A VF
Sbjct: 62 TSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVF 121
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
I ++ +V SW ++ G T + D ++++ ++ D + + + + + ++
Sbjct: 122 DEIPQK--SVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDS 179
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+V G +VH+ I GF V +L+ MY+K G I + +F+ + +R +VSW AMISG
Sbjct: 180 IVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISG 239
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+ G EA F M P++ +S+ GQ G +E G++ + A G++ N
Sbjct: 240 FVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSN 299
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVS--WTTMIAGCALNGEFVEALDLFHQL 437
+ V ALIDM++KCG + ++ +F + V+ W MI+G ++G EA+ LF ++
Sbjct: 300 IHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRM 359
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLE 463
+ +++ + T+ + L + LE
Sbjct: 360 CQNNIKRDVYTYCSTLNSIADMRSLE 385
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 7/262 (2%)
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDIDSARVL 301
T+++ L+ L + + +H I + L V ++N L+ YSKC D SAR +
Sbjct: 62 TSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTV-MLNQLVIAYSKCSDFGSARQV 120
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD I ++ SWT ++ G + G + + F + +PD + + I C ++
Sbjct: 121 FDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSI 180
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+G+ + G V +L+ MY+K G IGD+ ++F +L + VSW MI+G
Sbjct: 181 VVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGF 240
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
NG + EA + F +++ ++RPN F++V +A G +EKG I+ I ++ I
Sbjct: 241 VSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFE---IGMQ 297
Query: 482 PELDHYSCMADLLGRKGKLKEA 503
+ + + D+ + G + E+
Sbjct: 298 SNIHVGTALIDMFAKCGCVTES 319
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 279/535 (52%), Gaps = 4/535 (0%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+++I D+ ++ +N M+ G + + ++++MR G+ D T + +A
Sbjct: 61 SFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACAR 120
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
L +HS + G +AD V + I+ Y KC + A VF I ++ SW
Sbjct: 121 VLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDK--NFASWT 178
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+ ++G K ++++ +R ++ G R D ++V +LS+ L G + +
Sbjct: 179 ATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITEN 238
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G +V V L+ Y KCG+++ AR +FDG+ ++ VSW++MI GYA G EAL LF
Sbjct: 239 GMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLF 298
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
F M G PD ++ ++ C + GALELG W N DN ++ ALIDMY+KC
Sbjct: 299 FKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKC 358
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + A E+F + +K V W I+G A++G +AL LF Q+ + ++P+R TF+ +L
Sbjct: 359 GRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLL 418
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
ACTH G +E+G + + PE++HY CM DLLGR G L EA ++SMP++
Sbjct: 419 CACTHAGLVEEGR--RYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPME 476
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
++A +WG LL C++H + ++ E V L LEP + YV ++N YA +W+ A IR
Sbjct: 477 ANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIR 536
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
++M VKK PG S ++G F D H SE Y L LA + Y
Sbjct: 537 SIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGY 591
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 215/427 (50%), Gaps = 20/427 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ I +N+ IR V + +++ ++ M++ + P++ TFPF+ KACA++ D
Sbjct: 69 KEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGV 128
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H +VK+ + KC +D A+K+FD++ ++ ASW A + G+ +G
Sbjct: 129 KMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVG 188
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ +F + +G++ D +++ + A L + + + G+ +V V
Sbjct: 189 KCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVAT 248
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ Y KC +++ A VF G+ E + +VSW+SM+ G ++L+ + M+ G
Sbjct: 249 ALVDFYGKCGNMERARSVFDGMLE--KNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGL 306
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSAR 299
+ D +V +L S AL G S+ I+ LD SV+ T LI MY+KCG +D A
Sbjct: 307 KPDCYAMVGVLCSCARLGALELGDWA-SNLINGNEFLDNSVLGTALIDMYAKCGRMDRAW 365
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F G+ + RV W A ISG A G + +AL LF ME +G PD T + ++ C +G
Sbjct: 366 EVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAG 425
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
+E G ++F++ C L + ++D+ + G + +A +L ++P E + W +
Sbjct: 426 LVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGAL 485
Query: 418 IAGCALN 424
+ GC L+
Sbjct: 486 LGGCRLH 492
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 200/428 (46%), Gaps = 40/428 (9%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L LK +H+ + +G+D D + N + + + + +E + +N+M+
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKE--PNIFLFNTMI 80
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ--GRLVHSHGIHYG 274
G D F +S+ Y M G D T +L + C L G +HS + G
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKA--CARVLDSELGVKMHSLVVKAG 138
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ D V +LI++Y+KCG ID+A +FD I D+ SWTA ISGY G EA+ +F
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
+ G PD +++ ++S C ++G L G+W D Y G+ NV V AL+D Y KCG
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCG 258
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
++ AR +F + EK +VSW++MI G A NG EALDLF +++ L+P+ + VL
Sbjct: 259 NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLC 318
Query: 455 ACTHTGFLEKG-WAISII---QYDDKGISYNPELDHYSCMADL----------------- 493
+C G LE G WA ++I ++ D + +D Y+ +
Sbjct: 319 SCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVV 378
Query: 494 -------LGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHLNIEIGEYV---AY 540
L G +K+AL M IK D + LLCAC +E G
Sbjct: 379 WNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSME 438
Query: 541 CLFKLEPH 548
C+F L P
Sbjct: 439 CVFTLTPE 446
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 12/264 (4%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
L+ F C + L + +H+ + G D D ++N ++ G+ + + + D +
Sbjct: 16 LIQGFSCLKHL---KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPN 72
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
+ MI G E++ ++ +M G PD T ++ C + ELG +
Sbjct: 73 IFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHS 132
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
G + + V +LI++Y+KCG I +A ++F +P+K SWT I+G G+ E
Sbjct: 133 LVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCRE 192
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY-- 487
A+D+F +L+E+ LRP+ + + VL AC TG L G ++ D+ I+ N + +
Sbjct: 193 AIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG------EWIDEYITENGMVRNVFV 246
Query: 488 -SCMADLLGRKGKLKEALDFVQSM 510
+ + D G+ G ++ A M
Sbjct: 247 ATALVDFYGKCGNMERARSVFDGM 270
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 269/513 (52%), Gaps = 14/513 (2%)
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LRLF +M I+ D T+ L AA SL ++ H+ IG++ ++ I+
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y+ DD A VF GI R VVSWN+M+ + +R M+ G +
Sbjct: 197 YSYLDDPGAARKVFDGIPTR--DVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEG-TVAPN 253
Query: 246 TVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
V + C + LV GR V ++D V + L+ MY KCG+I AR +FD
Sbjct: 254 VVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFD 313
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I D+ V+W AMI+GYAQ G +EA+ LF +M AG PD +T+ ++S C GALEL
Sbjct: 314 TIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALEL 373
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G D YA GL NV V AL+DMY+KCG + A E+F +P K V SW +I G A
Sbjct: 374 GSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAF 433
Query: 424 NGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGIS 479
NG EA+ F QLM E L+P+ +TF+ VL AC H G ++ G W S+
Sbjct: 434 NGRGDEAIQHF-QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPE----FQ 488
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P+++HYSCM DLL R G L+EA DF++ +P K DA + G LL AC+ N+EIGE V
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVI 548
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
+ +LEP ++ YV + YA R D A +R +M+ V K PG S ++GK F
Sbjct: 549 NRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEF 608
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
A D ++ Y VLD L R E Y +L
Sbjct: 609 YAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNL 641
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 192/407 (47%), Gaps = 20/407 (4%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG-----------HIV 81
+ H +L LF M ++ I P++ T PF+ A A+ ++ H H V
Sbjct: 131 SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTV 190
Query: 82 KSPFVKCDRLD---CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
S LD A K+FD + RDV SWNAM+ + ++G V R+F +M G
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 139 ADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
A V + + AA + L L + V + ++ D V + + Y KC ++ A
Sbjct: 251 APNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF I + + +V+WN+M+ G +++++ + M G R D T+ +LS+
Sbjct: 311 VFDTIID--KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAV 368
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
AL G + + G +V V L+ MY+KCGD+D A +F + + SW A+I
Sbjct: 369 GALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALI 428
Query: 318 SGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG 375
G A G DEA++ F M G PD +T + ++S C +G ++ GK WF++
Sbjct: 429 CGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQ 488
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
+ + + ++D+ ++ G + +A + +P+K+ V ++A C
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 139/305 (45%), Gaps = 19/305 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WN+ ++ + +FR M K+ + PN +T + AC DL+ + +
Sbjct: 221 WNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWS 280
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G + + KC + A ++FD + +D+ +WNAM+ G+AQ G +
Sbjct: 281 WSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAI 340
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF++MR+ G++ D +T+ G+ A L L + + G+ ++V V + Y
Sbjct: 341 SLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMY 400
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVT 245
AKC DL A VF + + V SWN+++ G + + D+++ ++ M G + D
Sbjct: 401 AKCGDLDKAIEVFRKMP--CKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDI 458
Query: 246 TVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T + +LS+ V + G R +S + + + ++ + ++ G ++ A +
Sbjct: 459 TFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEK 518
Query: 305 ICDRT 309
I D+
Sbjct: 519 IPDKV 523
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 269/513 (52%), Gaps = 14/513 (2%)
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LRLF +M I+ D T+ L AA SL ++ H+ IG++ ++ I+
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y+ DD A VF GI R VVSWN+M+ + +R M+ G +
Sbjct: 197 YSYLDDPGAARKVFDGIPTR--DVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEG-TVAPN 253
Query: 246 TVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
V + C + LV GR V ++D V + L+ MY KCG+I AR +FD
Sbjct: 254 AVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFD 313
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I D+ V+W AMI+GYAQ G +EA+ LF +M AG PD +T+ ++S C GALEL
Sbjct: 314 TIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALEL 373
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G D YA GL NV V AL+DMY+KCG + A E+F +P K V SW +I G A
Sbjct: 374 GSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAF 433
Query: 424 NGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGIS 479
NG EA+ F QLM E L+P+ +TF+ VL AC H G ++ G W S+
Sbjct: 434 NGRGDEAIQHF-QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPE----FQ 488
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P+++HYSCM DLL R G L+EA DF++ +P K DA + G LL AC+ N+EIGE V
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVI 548
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
+ +LEP ++ YV + YA R D A +R +M+ V K PG S ++GK F
Sbjct: 549 NRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEF 608
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
A D ++ Y VLD L R E Y +L
Sbjct: 609 YAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNL 641
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 191/407 (46%), Gaps = 20/407 (4%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG-----------HIV 81
+ H +L LF M ++ I P++ T PF+ A A+ ++ H H V
Sbjct: 131 SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTV 190
Query: 82 KSPFVKCDRLD---CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
S LD A K+FD + RDV SWNAM+ + ++G V R+F +M G
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 139 ADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
A + + AA + L L + V + ++ D V + + Y KC ++ A
Sbjct: 251 APNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF I + + +V+WN+M+ G +++++ + M G R D T+ +LS+
Sbjct: 311 VFDTIID--KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAV 368
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
AL G + + G +V V L+ MY+KCGD+D A +F + + SW A+I
Sbjct: 369 GALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALI 428
Query: 318 SGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG 375
G A G DEA++ F M G PD +T + ++S C +G ++ GK WF++
Sbjct: 429 CGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQ 488
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
+ + + ++D+ ++ G + +A + +P+K+ V ++A C
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 139/305 (45%), Gaps = 19/305 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WN+ ++ + +FR M K+ + PN +T + AC DL+ + +
Sbjct: 221 WNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWS 280
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G + + KC + A ++FD + +D+ +WNAM+ G+AQ G +
Sbjct: 281 WSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAI 340
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF++MR+ G++ D +T+ G+ A L L + + G+ ++V V + Y
Sbjct: 341 SLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMY 400
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVT 245
AKC DL A VF + + V SWN+++ G + + D+++ ++ M G + D
Sbjct: 401 AKCGDLDKAIEVFRKMP--CKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDI 458
Query: 246 TVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T + +LS+ V + G R +S + + + ++ + ++ G ++ A +
Sbjct: 459 TFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEK 518
Query: 305 ICDRT 309
I D+
Sbjct: 519 IPDKV 523
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 247/441 (56%), Gaps = 37/441 (8%)
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+V W +++ G + +LNFY M+ G + T S+L +CP + G+ +H
Sbjct: 39 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK--LCP--IEPGKALH 94
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDI-------------------------------D 296
S + GFD D+ V L+ +Y++ GD+ D
Sbjct: 95 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 154
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+ARVLFDG+ +R V W MI GY Q G +EAL LF M A P+ VTVLS++S CG
Sbjct: 155 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 214
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
Q GALE G+W +Y + G++ NV V AL+DMYSKCGS+ DAR +F + +K VV+W +
Sbjct: 215 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 274
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
MI G A+ G EAL LF + + L P +TF+ +L AC H+G++ +GW I D+
Sbjct: 275 MIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEY 334
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
GI P+++HY CM +LLGR G +++A + V++M I+ D +WGTLL AC++H I +GE
Sbjct: 335 GIE--PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGE 392
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
+ L ++ Y+ ++N YA G WDGVA +RTMMK + VKK PG S +N K
Sbjct: 393 KIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKV 452
Query: 597 CTFTAEDRYHAESELTYPVLD 617
F A H + + Y +L+
Sbjct: 453 HEFLAGGLNHPKRKEIYMMLE 473
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 182/396 (45%), Gaps = 41/396 (10%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
++ + RLD + +F V W A++ G A G E L + M G++ +
Sbjct: 15 LQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPN 74
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV---------------------- 178
T + + + K++HS + +G D+D+ V
Sbjct: 75 AFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFD 130
Query: 179 ---------CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
++ YAK +L A ++F G+EER V WN M+ G T +++L
Sbjct: 131 TMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEER--DGVCWNVMIDGYTQNGMPNEAL 188
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+R M+ + + TV+S+LS+ AL GR VHS+ + G +V V L+ MY
Sbjct: 189 VLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMY 248
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
SKCG ++ AR++FD I D+ V+W +MI GYA G EAL+LF +M G P +T +
Sbjct: 249 SKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFI 308
Query: 350 SMISGCGQSGALELGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
++S CG SG + G W F+ G++ + ++++ + G + A EL +
Sbjct: 309 GILSACGHSGWVTEG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN 367
Query: 408 -EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
E V W T++ C L+G+ + L++ +L
Sbjct: 368 IEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNL 403
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 40/254 (15%)
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
++ L Y+ G +D + LF + + WTA+I G+A +G ++AL + M G
Sbjct: 12 LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
P+ T S++ C +E GK + A G ++ V L+D+Y++ G + A++
Sbjct: 72 EPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127
Query: 402 LFYALPEKIVVS-------------------------------WTTMIAGCALNGEFVEA 430
LF +PEK +VS W MI G NG EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSC 489
L LF ++++ +PN VT L+VL AC G LE G W S I+ + GI +N + +
Sbjct: 188 LVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE--NNGIQFNVHVG--TA 243
Query: 490 MADLLGRKGKLKEA 503
+ D+ + G L++A
Sbjct: 244 LVDMYSKCGSLEDA 257
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I ++ L+LFR+M + +PN +T + AC +L L + +H +I
Sbjct: 171 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 230
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC L+ A +FD++ +DV +WN+M+VG+A GF + L+
Sbjct: 231 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQ 290
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF +M +G+ +T +G+ A H+
Sbjct: 291 LFKSMCRMGLHPTNITFIGILSACGHS 317
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y+ G + + LF V WT +I G AL G +AL+ + Q++ + PN TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
++L+ C +E G A + + ++ +L + + D+ R G + A +
Sbjct: 79 SSILKLCP----IEPGKA---LHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDT 131
Query: 510 MPIKSDAGIWGTLLCACK 527
MP KS + L C K
Sbjct: 132 MPEKSLVSLTAMLTCYAK 149
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 280/520 (53%), Gaps = 12/520 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAA 151
AY +F V DV +WN+ML F L+ + M R + F T L +
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRF-TFPSLLKGC 89
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTV 209
+ K +H + + +D+ + T ++ YA C DLK A +F ER+ R
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF----ERMGHRNK 145
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V W SM++G +++L Y+ M +GF D T+ +L+S+ + L G +HSH
Sbjct: 146 VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSH 205
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ + + L++MY+KCGD+ +AR +FD + D+ +W+A+I GY + EA
Sbjct: 206 IREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEA 265
Query: 330 LRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
L+LF + + P+ VT+L++IS C Q G LE G+W +Y +V + N+LID
Sbjct: 266 LQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLID 325
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
M+SKCG I A+ +F ++ K ++SW +M+ G AL+G EAL FH + DL+P+ +T
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEIT 385
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F+ VL AC+H G +++G + G+ E HY CM DLL R G L EA +F++
Sbjct: 386 FIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSE--HYGCMVDLLCRAGLLAEAREFIR 443
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
MP++ D IWG++L AC+++ N+E+GE A CL +LEP + Y+ ++N YA W+
Sbjct: 444 VMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNE 503
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
V +R +M ++K PG S I+ +F A D H E
Sbjct: 504 VKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPE 543
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 213/444 (47%), Gaps = 32/444 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS +R VN N + L + +M + P+ TFP + K CA L + +++HG +
Sbjct: 46 WNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQV 105
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + + C L A +F+ M R+ W +M+ G+ + L
Sbjct: 106 VKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEAL 165
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC----NTW 182
L+ M G D VT+ L A K L + +HS HI + D+ +C +
Sbjct: 166 LLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS---HIR-EMDMKICAVLGSAL 221
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFR 241
++ YAKC DLK A VF + + + V +W++++ G ++ ++L +R + + R
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSD--KDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMR 279
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T+++++S+ L GR VH + VS+ N+LI M+SKCGDID+A+ +
Sbjct: 280 PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRI 339
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + +SW +M++G A G EAL F M+ PD +T + +++ C +G +
Sbjct: 340 FDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLV 399
Query: 362 ELGK--WFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
+ GK +++ A G LK C ++D+ + G + +ARE +P + W +M
Sbjct: 400 QEGKKLFYEIEALYGVRLKSEHYGC--MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSM 457
Query: 418 IAGCALNGEFVEALDLFHQLMELD 441
+ C + + L+EL+
Sbjct: 458 LGACRVYNNLELGEEAARCLLELE 481
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 310/601 (51%), Gaps = 23/601 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQND--IEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WNS + + ++ LF+ + D + P+ T + CA+ ++ + HG
Sbjct: 265 WNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGL 324
Query: 80 IVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+K + KC L C ++ + ++V SWN+M+ G+++
Sbjct: 325 ALKLGLCGELKVNSSLLDMYSKCGYL-CEARVLFDTNEKNVISWNSMIGGYSKDRDFRGA 383
Query: 126 LRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 183
L M++ ++ + VT++ + LK +H + + G + +D V N ++
Sbjct: 384 FELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFV 443
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ YAKC L AE VFCG+E ++ V SWN+++ G +L+ Y M +G D
Sbjct: 444 AGYAKCGSLHYAEGVFCGMESKM--VSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPD 501
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ T+ SLLS+ ++L G+ +H + GF+LD + +L+S+Y +CG I A++ FD
Sbjct: 502 LFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFD 561
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ ++ V W MI+G++Q +AL +F M ++ PD ++++ + C Q AL L
Sbjct: 562 NMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRL 621
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK +A L ++ V +LIDMY+KCG + ++ +F + K V+W +I G +
Sbjct: 622 GKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGI 681
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G +A++LF + RP+ VTF+A+L AC H G + +G + + P+
Sbjct: 682 HGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEG--LEYLGQMQSLFGIKPK 739
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
L+HY+C+ D+LGR G+L EAL+ V +P K D+ IW +LL +C+ + +++IGE VA L
Sbjct: 740 LEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLL 799
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+L P A YV ++N YA G+WD V +R MK ++K G S I GK F D
Sbjct: 800 ELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGD 859
Query: 604 R 604
Sbjct: 860 E 860
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 254/537 (47%), Gaps = 32/537 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYS 73
R + WN+ + + + + +F +M + P+N T P + KAC + D+
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215
Query: 74 QMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +HG +K+ + K ++ A K+FD+M R++ SWN+++ +
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275
Query: 120 GFLENVLRLFYNMRL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
G E LF + G+ D T++ + + L H + +G+ ++
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELK 335
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM-M 236
V ++ + Y+KC L A ++F + + V+SWNSM+ G + F + R M M
Sbjct: 336 VNSSLLDMYSKCGYLCEARVLF---DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQM 392
Query: 237 YNGFRLDVTTVVSLLSSFVCPEAL--VQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCG 293
+ +++ T++++L VC E + ++ + +H + + +GF D V N ++ Y+KCG
Sbjct: 393 EDKVKVNEVTLLNVLP--VCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCG 450
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+ A +F G+ + SW A+I G+ Q G +AL L+ M +G PDL T+ S++S
Sbjct: 451 SLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLS 510
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C + +L GK G + + +C +L+ +Y +CG I A+ F + EK +V
Sbjct: 511 ACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVC 570
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W TMI G + N +ALD+FHQ++ + P+ ++ + L AC+ L G +
Sbjct: 571 WNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAV 630
Query: 474 DDKGISYNPELDHYSC-MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S+ E +C + D+ + G ++++ + + +K + W L+ IH
Sbjct: 631 K----SHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEV-TWNVLITGYGIH 682
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 235/509 (46%), Gaps = 36/509 (7%)
Query: 42 FRQMKQNDIEPNNLTFP-----FIAKACAKLSDLIYSQMIHGHIVKSPFVKCD-----RL 91
F Q ND+ ++ + P + + C + ++ + IH I SP + D RL
Sbjct: 76 FLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRL 135
Query: 92 DCAYKI----------FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQAD 140
Y I F+ +++ WNA+L G+ + + + +F M L D
Sbjct: 136 VTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPD 195
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T+ + +A + + L ++VH F + V +DV V N I+ Y K ++ A VF
Sbjct: 196 NFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFD 255
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCPE 258
+ + R +VSWNS++ C F++S ++ ++ G DV T+V+++
Sbjct: 256 KMPQ--RNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQG 313
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
+ G + H + G ++ V ++L+ MYSKCG + ARVLFD ++ +SW +MI
Sbjct: 314 EVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIG 372
Query: 319 GYAQKGDLDEALRLFFAMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGG-L 376
GY++ D A L M+ ++ + VT+L+++ C + K YA G +
Sbjct: 373 GYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFI 432
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ + +V NA + Y+KCGS+ A +F + K+V SW +I G NG +ALDL+
Sbjct: 433 QSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLL 492
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLL 494
+ L P+ T ++L AC L G I + ELD + C++ L
Sbjct: 493 MRGSGLEPDLFTIASLLSACARLKSLSCGKEI-----HGSMLRNGFELDEFICISLVSLY 547
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ GK+ A F +M K + W T++
Sbjct: 548 VQCGKILLAKLFFDNMEEK-NLVCWNTMI 575
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 167/371 (45%), Gaps = 30/371 (8%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
S ++ WN+ I V K L L+ M+ + +EP+ T + ACA+L L +
Sbjct: 463 ESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGK 522
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG ++++ F V+C ++ A FD M +++ WN M+ GF+Q
Sbjct: 523 EIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNE 582
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
F + L +F+ M I D ++++G A L L K +H F + + V
Sbjct: 583 FPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTC 642
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I YAKC ++ ++ +F + L+ V+WN ++ G ++ ++ M GF
Sbjct: 643 SLIDMYAKCGCMEQSQNIFDRV--HLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGF 700
Query: 241 RLDVTTVVSLLSSFVCPEA-LVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDS 297
R D T ++LL++ C A LV L + + +G + ++ M + G ++
Sbjct: 701 RPDSVTFIALLTA--CNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNE 758
Query: 298 ARVLFDGICDR--TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
A L + + D+ +R+ W++++S DLD ++ + G PD +IS
Sbjct: 759 ALELVNELPDKPDSRI-WSSLLSSCRNYRDLDIGEKVANKLLELG--PDKAENYVLIS-- 813
Query: 356 GQSGALELGKW 366
+ LGKW
Sbjct: 814 --NFYARLGKW 822
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 194/621 (31%), Positives = 310/621 (49%), Gaps = 48/621 (7%)
Query: 47 QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG-----HIVKSPFVKCDRLDCAYKIFDEM 101
+N + N + ++ A L+ ++ +M H +++ + + + RL A +FD M
Sbjct: 62 RNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSM 121
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
+DV SWNAML G+ + G ++ +F M + ++ GL A + + L +
Sbjct: 122 PEKDVVSWNAMLSGYVRSGHVDEARDVFDRM----PHKNSISWNGLLAAYVRSGRLEEAR 177
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+ D ++ CN + Y K + L A +F I +R ++SWN+M++G
Sbjct: 178 RL----FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIP--VRDLISWNTMISGYAQ 231
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR----------------L 265
D L+ R + DV T +++ ++V L + R +
Sbjct: 232 ----DGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVM 287
Query: 266 VHSHGIHYGFDL-----------DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
+ + + D+ ++ N +IS Y + GD+ AR LFD + R VSW
Sbjct: 288 IAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWA 347
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
A+I+GYAQ G +EA+ + M+ GE + T +S C ALELGK
Sbjct: 348 AIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRT 407
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G + +V NAL+ MY KCG I +A ++F + K +VSW TM+AG A +G +AL +F
Sbjct: 408 GYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVF 467
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++ ++P+ +T + VL AC+HTG ++G D GI+ P HY+CM DLL
Sbjct: 468 ESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGIT--PNSKHYACMIDLL 525
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
GR G L+EA + +++MP + DA WG LL A +IH N+E+GE A +FK+EPH++ YV
Sbjct: 526 GRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYV 585
Query: 555 EMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYP 614
++N YA GRW V+ +R M++ V+K PG S + K TFT D +H E Y
Sbjct: 586 LLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYA 645
Query: 615 VLDCLALHSREEAYSSHLKWI 635
L+ L L + E Y S K +
Sbjct: 646 FLEELDLKMKHEGYVSSTKLV 666
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 197/435 (45%), Gaps = 33/435 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYS-----QM 75
WN+ + V + +F +M +N I N L ++ + + ++ ++
Sbjct: 129 WNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWEL 188
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
I + + +VK + L A ++FD++ VRD+ SWN M+ G+AQ G L RLF +
Sbjct: 189 ISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVR 248
Query: 136 GIQADFVTVMGLTQAAI------------HAKHLSLLKSVHSFGIHIGVD---------- 173
+ V Q + + +S + + + +D
Sbjct: 249 DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMP 308
Query: 174 -ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
++ N IS Y + DL A +F + + R VSW +++AG +++++N
Sbjct: 309 FPNIGSWNIMISGYCQNGDLAQARNLFDMMPQ--RDSVSWAAIIAGYAQNGLYEEAMNML 366
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M +G L+ +T LS+ AL G+ VH + G++ V N L+ MY KC
Sbjct: 367 VEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKC 426
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G ID A +F G+ + VSW M++GYA+ G +AL +F +M AG PD +T++ ++
Sbjct: 427 GCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVL 486
Query: 353 SGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKI 410
S C +G + G ++F + G+ N +ID+ + G + +A+ L +P E
Sbjct: 487 SACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPD 546
Query: 411 VVSWTTMIAGCALNG 425
+W ++ ++G
Sbjct: 547 AATWGALLGASRIHG 561
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 73/350 (20%)
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA------ 339
IS + + G D A +FD + R VS+ AMISGY + A LF M
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99
Query: 340 -------------------GELP--DLVTVLSMISGCGQSGALELGK-WFDN-------- 369
+P D+V+ +M+SG +SG ++ + FD
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS 159
Query: 370 -------YACSGGLKD-----------NVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
Y SG L++ ++ CN L+ Y K +GDAR+LF +P + +
Sbjct: 160 WNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDL 219
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
+SW TMI+G A +G+ +A LF + D+ T+ A++ A G L++ +
Sbjct: 220 ISWNTMISGYAQDGDLSQARRLFEESPVRDV----FTWTAMVYAYVQDGMLDEARRVFDE 275
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA-CKIHL 530
+ +SYN + Y+ + ++ + + MP + G W ++ C+
Sbjct: 276 MPQKREMSYNVMIAGYA-------QYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQ--- 324
Query: 531 NIEIGEYVAYCLFKLEPH-SAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
N ++ + A LF + P + + + YA G ++ N+ MKR+
Sbjct: 325 NGDLAQ--ARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRD 372
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 277/502 (55%), Gaps = 4/502 (0%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M + G++ +F + I + + VH+ I + V + I Y KC
Sbjct: 468 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 527
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
L A V + ER VVSW +M++G + ++L+ + M+ +G + T ++L
Sbjct: 528 LGDARRVLDEMPER--NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL 585
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
+S GR +HS I F+ + V ++L+ MY+K G I AR +FDG+ +R V
Sbjct: 586 TSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVV 645
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
S TA+ISGYAQ G +EAL LF ++ G + VT S+++ AL+ G+ ++
Sbjct: 646 SCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV 705
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
L V++ N+LIDMYSKCGS+ +R +F ++PE+ V+SW M+ G + +G EA+
Sbjct: 706 LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 765
Query: 432 DLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
+LF + E + ++P+ VTFLAVL C+H G ++G I + K + PE++HY C+
Sbjct: 766 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD-GFEPEIEHYGCV 824
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSA 550
DL GR G+++EA +F++ MP + A IWG+LL AC++H N+ IGE+VA L ++E +A
Sbjct: 825 VDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENA 884
Query: 551 APYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
YV ++N YA GRWD V +R +MK V K PG+S ++ TF A DR H E
Sbjct: 885 GNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKE 944
Query: 611 LTYPVLDCLALHSREEAYSSHL 632
+ + L++ +E Y L
Sbjct: 945 EVFAKVRELSIKIKEAGYVPEL 966
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 204/422 (48%), Gaps = 32/422 (7%)
Query: 37 KTLLLFRQMKQ-------NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS---PFV 86
KTL RQ+K+ +E + + C + + Q +H H++K+ P V
Sbjct: 453 KTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPV 512
Query: 87 -----------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
KC L A ++ DEM R+V SW AM+ G++Q G+ L LF M +
Sbjct: 513 YLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMS 572
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G + T + + + L + +HS I ++ + V ++ + YAK + A
Sbjct: 573 GTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEA 632
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
VF G+ E R VVS ++++G +++L+ +R + G R + T S+L++
Sbjct: 633 RRVFDGLPE--RDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS 690
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
AL GR VHSH + V + N+LI MYSKCG + +R +FD + +RT +SW A
Sbjct: 691 GLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNA 750
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGK--WFDNYAC 372
M+ GY++ G EA+ LF M+ ++ PD VT L+++SGC G + G +++
Sbjct: 751 MLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQ 810
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN-----GE 426
G + + ++D++ + G + +A E +P E W +++ C ++ GE
Sbjct: 811 KDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGE 870
Query: 427 FV 428
FV
Sbjct: 871 FV 872
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 29/299 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + A + L LF +M + PN TF + +C S + IH ++
Sbjct: 546 WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI 605
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K ++ A ++FD + RDV S A++ G+AQ+G E L
Sbjct: 606 KTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALD 665
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF ++ G+++++VT + A L + VHS + + V + N+ I Y+
Sbjct: 666 LFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYS 725
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTT 246
KC L + +F + E RTV+SWN+M+ G + +++ ++ M N + D T
Sbjct: 726 KCGSLTYSRRIFDSMPE--RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 783
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHY-------GFDLDVSVINTLISMYSKCGDIDSA 298
+++LS C ++ R + I Y GF+ ++ ++ ++ + G ++ A
Sbjct: 784 FLAVLSG--CSHGGMEDRGLE---IFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 837
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 269/513 (52%), Gaps = 14/513 (2%)
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LRLF +M I+ D T+ L AA SL ++ H+ IG++ ++ I+
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y+ DD A VF GI R VVSWN+M+ + +R M+ G +
Sbjct: 197 YSYLDDPGAARKVFDGIPTR--DVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEG-TVAPN 253
Query: 246 TVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
V + C + LV GR V ++D V + L+ MY KCG+I AR +FD
Sbjct: 254 VVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFD 313
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I D+ V+W AMI+GYAQ G +EA+ LF +M AG PD +T+ ++S C GALEL
Sbjct: 314 TIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALEL 373
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G D YA GL NV V AL+DMY+KCG + A E+F +P K V SW +I G A
Sbjct: 374 GSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAF 433
Query: 424 NGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGIS 479
NG EA+ F QLM E L+P+ +TF+ VL AC H G ++ G W S+
Sbjct: 434 NGRGDEAIQHF-QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPE----FQ 488
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P+++HYSCM DLL R G L+EA DF++ +P K DA + G LL AC+ N+EIGE V
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVI 548
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
+ +LEP ++ YV + YA R D A +R +M+ V K PG S ++GK F
Sbjct: 549 NRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEVSGKVLEF 608
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHL 632
A D ++ Y VLD L R E Y +L
Sbjct: 609 YAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNL 641
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 192/407 (47%), Gaps = 20/407 (4%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG-----------HIV 81
+ H +L LF M ++ I P++ T PF+ A A+ ++ H H V
Sbjct: 131 SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTV 190
Query: 82 KSPFVKCDRLD---CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
S LD A K+FD + RDV SWNAM+ + ++G V R+F +M G
Sbjct: 191 HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTV 250
Query: 139 ADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
A V + + AA + L L + V + ++ D V + + Y KC ++ A
Sbjct: 251 APNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARR 310
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF I + + +V+WN+M+ G +++++ + M G R D T+ +LS+
Sbjct: 311 VFDTIID--KDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAV 368
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
AL G + + G +V V L+ MY+KCGD+D A +F + + SW A+I
Sbjct: 369 GALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALI 428
Query: 318 SGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG 375
G A G DEA++ F M G PD +T + ++S C +G ++ GK WF++
Sbjct: 429 CGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQ 488
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
+ + + ++D+ ++ G + +A + +P+K+ V ++A C
Sbjct: 489 IIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 139/305 (45%), Gaps = 19/305 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WN+ ++ + +FR M K+ + PN +T + AC DL+ + +
Sbjct: 221 WNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWS 280
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G + + KC + A ++FD + +D+ +WNAM+ G+AQ G +
Sbjct: 281 WSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAI 340
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF++MR+ G++ D +T+ G+ A L L + + G+ ++V V + Y
Sbjct: 341 SLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMY 400
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVT 245
AKC DL A VF + + V SWN+++ G + + D+++ ++ M G + D
Sbjct: 401 AKCGDLDKAIEVFRKMP--CKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDI 458
Query: 246 TVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T + +LS+ V + G R +S + + + ++ + ++ G ++ A +
Sbjct: 459 TFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEK 518
Query: 305 ICDRT 309
I D+
Sbjct: 519 IPDKV 523
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 294/602 (48%), Gaps = 19/602 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + + L L+ +M + P+ TFP + + C + D + +H H+
Sbjct: 164 SWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHV 223
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
++ F KC + A K+FD MAV D SWNAM+ G + E L
Sbjct: 224 LRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGL 283
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M +Q + +T+ +T A+ + K +H F + G DV+ CN+ I Y
Sbjct: 284 ELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMY 343
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ A +F +E + +SW +M++G D +L Y M + D T
Sbjct: 344 TSLGRMGDAGKIFSRMETK--DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVT 401
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S L++ C L G +H + GF V V N L+ MY+K ID A +F +
Sbjct: 402 IASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA 461
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ VSW++MI+G+ EAL F M + P+ VT ++ +S C +GAL GK
Sbjct: 462 EKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVK-PNSVTFIAALSACAATGALRSGKE 520
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y G+ V NAL+D+Y KCG A F EK VVSW M++G +G
Sbjct: 521 IHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGL 580
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL LF+Q++E+ P+ VTF+A+L AC+ G + +GW + + S P L H
Sbjct: 581 GDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGW--ELFHMMTEKFSIVPNLKH 638
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM DLL R GKL EA + + MPIK DA +WG LL C+IH ++E+GE A + +LE
Sbjct: 639 YACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELE 698
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+ A +V + + Y G+W VA +R M+ +++ G S + G T F +D H
Sbjct: 699 PNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESH 758
Query: 607 AE 608
+
Sbjct: 759 PQ 760
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 207/391 (52%), Gaps = 3/391 (0%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+ + S V+ + A+++F +M RDV SWN M+ G+ ++GFLE L L+Y M G+
Sbjct: 134 GNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ D T + + + + VH+ + G +V V N ++ YAKC D+ A
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF G+ + +SWN+M+AG + + L + M+ N + ++ T+ S+ +
Sbjct: 254 VFDGMA--VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ + +H + GF +DV+ N+LI MY+ G + A +F + + +SWTAMI
Sbjct: 312 SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SGY + G D+AL ++ ME PD VT+ S ++ C G L++G A + G
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
V+V NAL++MY+K I A E+F + EK VVSW++MIAG N EAL F +
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM 491
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ ++PN VTF+A L AC TG L G I
Sbjct: 492 LG-HVKPNSVTFIAALSACAATGALRSGKEI 521
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 196/387 (50%), Gaps = 17/387 (4%)
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
SFG+ +G N +S + ++ A VF + ER V SWN MV G
Sbjct: 128 SFGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPER--DVFSWNVMVGGYGKVGF 177
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+++L+ Y M++ G R DV T +L + GR VH+H + +GF +V V+N
Sbjct: 178 LEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNA 237
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L++MY+KCGDI +AR +FDG+ +SW AMI+G+ + + + L LF M P+
Sbjct: 238 LVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPN 297
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
L+T+ S+ G + K +A G +V CN+LI MY+ G +GDA ++F
Sbjct: 298 LMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFS 357
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLE 463
+ K +SWT MI+G NG +AL+++ LMEL ++ P+ VT + L AC G L+
Sbjct: 358 RMETKDAMSWTAMISGYEKNGFPDKALEVY-ALMELHNVSPDDVTIASALAACACLGRLD 416
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G + + + I Y + + + ++ + + +A++ + M K D W +++
Sbjct: 417 VGIKLHELAQNKGFIRY---VVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMI 472
Query: 524 CA-CKIHLNIEIGEYVAYCLFKLEPHS 549
C H + E Y Y L ++P+S
Sbjct: 473 AGFCFNHRSFEALYYFRYMLGHVKPNS 499
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 294/592 (49%), Gaps = 60/592 (10%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRD 105
+ +AC + L ++ IH H +K+ ++ C+++ A ++FDE+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V WN ++ +A G + + L+++M +G++ + T + +A + +HS
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
G+++DV VC + YAKC L A+ +F + R VV+WN+M+AGC+
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR--DVVAWNAMIAGCSLYGLC 191
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
DD++ M G +CP + +T+
Sbjct: 192 DDAVQLIMQMQEEG---------------ICPNS-----------------------STI 213
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+ + C + AR +FD + R VSW+AMI GY + EAL +F M+ +G PDL
Sbjct: 214 VGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDL 273
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T+L ++ C AL+ G Y G + ++CNALIDMYSKCG I ARE+F
Sbjct: 274 TTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 333
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ +VSW MI G ++G +EAL LFH L+ L L+P+ +TF+ +L +C+H+G + +G
Sbjct: 334 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 393
Query: 466 --WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
W ++ + S P ++H CM D+LGR G + EA F+++MP + D IW LL
Sbjct: 394 RLWFDAM----SRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALL 449
Query: 524 CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
AC+IH NIE+GE V+ + L P S +V ++N Y+ GRWD A+IR K +KK
Sbjct: 450 SACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKK 509
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
PG S ING F D+ H + L+ L + + Y + ++
Sbjct: 510 IPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFV 561
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 189/435 (43%), Gaps = 56/435 (12%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L RL + ++ WN IR + L+ M + PN T+PF+ KAC+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 66 KLSDLIYSQMIHGH--------------IVKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
L + IH H + + KC L A ++F M+ RDV +WNA
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ G + G ++ ++L M+ GI + T++G+
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGV------------------------ 216
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
C L A +F + +R VSW++M+ G D ++L+
Sbjct: 217 --------------LPTCQCLLYARKIFDVMG--VRNEVSWSAMIGGYVASDCMKEALDI 260
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+R M +G D+TT++ +L + AL G H + I GF D + N LI MYSK
Sbjct: 261 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSK 320
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG I AR +F+ + VSW AMI GY G EAL LF + A G PD +T + +
Sbjct: 321 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 380
Query: 352 ISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 409
+S C SG + G+ WFD + + + C ++D+ + G I +A +P E
Sbjct: 381 LSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 440
Query: 410 IVVSWTTMIAGCALN 424
V W+ +++ C ++
Sbjct: 441 DVRIWSALLSACRIH 455
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
L ++ C QS +L K + + V + L +Y C + AR LF +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
V+ W +I A NG F A+DL+H ++ L +RPN+ T+ VL+AC+ +E G
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG--- 128
Query: 469 SIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
++ + E D + C A D + G L EA SM + D W ++ C
Sbjct: 129 --VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Query: 527 KIH 529
++
Sbjct: 186 SLY 188
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 287/544 (52%), Gaps = 13/544 (2%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
R+ A ++FD++ ++A WN+M G+AQ V+ LF+ M+ + I+ + T + +
Sbjct: 148 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 207
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ L + VH F I G + V T I Y+ + A +FC + ER V
Sbjct: 208 SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFER--NV 265
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V+W SM+ G L R + DV ++S ++ +V+ R +
Sbjct: 266 VAWTSMINGYI----LSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXE 321
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ DV NT++ Y+ G++++ LF+ + +R SW A+I GYA G E
Sbjct: 322 MP----NRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEV 377
Query: 330 LRLFFAMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
L F M + ++P + T+++++S C + GAL+LGKW YA S GLK NV V NAL+D
Sbjct: 378 LGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMD 437
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+KCG I +A +F + K ++SW T+I G A++ +AL+LF Q+ +P+ +T
Sbjct: 438 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 497
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F+ +L ACTH G +E G+A DD I P+++HY CM D+L R G+L++A FV+
Sbjct: 498 FIGILCACTHMGLVEDGFAYFQSMADDYLIM--PQIEHYGCMVDMLARAGRLEQAXAFVR 555
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
MP+++D IW LL AC+I+ N+E+ E L +LEP + A YV ++N Y GRW+
Sbjct: 556 KMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWED 615
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
VA ++ M+ KK PG SL +N F + D H + E Y VL L R Y
Sbjct: 616 VARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY 675
Query: 629 SSHL 632
L
Sbjct: 676 VPDL 679
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 203/443 (45%), Gaps = 27/443 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WNS R + + LF QMK DI PN TFP + K+C K++ LI + +H
Sbjct: 163 NIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVH 222
Query: 78 GHIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
++K +PFV +D AYKIF EM R+V +W +M+ G+ L
Sbjct: 223 CFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLV 282
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ RLF + + V G + + L + + DV NT +
Sbjct: 283 SARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMP--------NRDVMFWNTVL 334
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRL 242
YA +++ E +F + E R + SWN+++ G + F + L ++ M+
Sbjct: 335 KGYATNGNVEALEGLFEEMPE--RNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPP 392
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T+V++LS+ AL G+ VH + G +V V N L+ MY+KCG I++A +F
Sbjct: 393 NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVF 452
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
G+ + +SW +I G A +AL LFF M+ AG+ PD +T + ++ C G +E
Sbjct: 453 RGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVE 512
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAG 420
G +F + A + + ++DM ++ G + A +P E V W ++
Sbjct: 513 DGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGA 572
Query: 421 CALNGEFVEALDLFHQLMELDLR 443
C + A +L+EL+ +
Sbjct: 573 CRIYKNVELAELALQRLIELEPK 595
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+ + I GF + + L+++ + + AR LFD I D W +M GYAQ
Sbjct: 120 IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSES 179
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
E + LFF M+ P+ T ++ CG+ AL G+ + G + N V
Sbjct: 180 YREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTT 239
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LIDMYS G++GDA ++F + E+ VV+WT+MI G L+ + V A LF DL P
Sbjct: 240 LIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF------DLAPE 293
Query: 446 RVTFLAVLQACTHTGFLEKG 465
R VL +G++E G
Sbjct: 294 RDV---VLWNIMVSGYIEGG 310
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 320/648 (49%), Gaps = 51/648 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I + + L LF +M + P LT+ + AC + Y M+HG I
Sbjct: 192 WNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRI 251
Query: 81 VKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+K+ + KC L A ++F+ ++ +DV SWNAM+ Q G EN L
Sbjct: 252 IKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALG 311
Query: 128 LFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LF M V +Q + VT + L A L + +H+ + ++ D S+ N+ I+
Sbjct: 312 LFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITF 371
Query: 186 YAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC ++ A +F ERL R ++SWNSM+AG ++ + ++ MM +G D
Sbjct: 372 YSKCREVGKAREIF----ERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPD 427
Query: 244 VTTVVSLLSSFVCPEA----LVQGRLVHSHGIHY----GFDLDVSVINTLISMYSKCGDI 295
++ + ++ + +G+ +H + + G L VS N ++ MY+K I
Sbjct: 428 SHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVS--NAILKMYAKFNRI 485
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
A +F G+ +R SW AM+ GY++ ++ L +F + G D V++ +++ C
Sbjct: 486 ADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSC 545
Query: 356 GQSGALELGKWFDNYACSGGL--------KDNVM-VCNALIDMYSKCGSIGDARELFYAL 406
G+ +L+LGK F +A L +D+++ + NALI MYSKCGSI DA ++F +
Sbjct: 546 GRLVSLQLGKQF--HAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKM 603
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
K V SWT MI GCA +G VEAL LF ++ ++PN+VTFLA+L AC H G +++G
Sbjct: 604 ERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGS 663
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ-----SMPIKSDA-GIWG 520
Y+D G+S P ++HY+CM DL GR G+ A V+ P D +W
Sbjct: 664 YYFDSMYNDYGLS--PSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWK 721
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
LL AC +++G A + +LEP A Y+ +AN YA G W+ +R M+
Sbjct: 722 VLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKG 781
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
++K G S + F A D YH + + Y L L R Y
Sbjct: 782 LRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGY 829
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 16/416 (3%)
Query: 46 KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRD 105
KQ + + + + FI + C+ S + SQ H +RL CA ++FD RD
Sbjct: 38 KQLEFQNHGFSSQFIFR-CSACSKFLVSQSEH-----------ERLKCAQQLFDNFPNRD 85
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V SW+A++ +++ G LF M G+Q + ++ L + + + L + +H
Sbjct: 86 VISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHG 145
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ I G D + WI+ Y++C L+ A+ VF ++ WNS++A + +
Sbjct: 146 WSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCW 205
Query: 226 DDSLNFYRHMMYNGFRLDVT-TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+ L + M+ G T S++++ G +VH I G + ++ N+
Sbjct: 206 VEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLE-ATNLWNS 264
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--L 342
L++ Y KCG++ A LF+ I + VSW AMI+ Q+G+ + AL LF M
Sbjct: 265 LVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQ 324
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ VT LS++S AL G+ + L+ + + N+LI YSKC +G ARE+
Sbjct: 325 PNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREI 384
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
F L + ++SW +M+AG N + D+F ++M + P+ + + A +
Sbjct: 385 FERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASR 440
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 244/529 (46%), Gaps = 55/529 (10%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------V 86
LF++M ++PN + + K ++ + +HG +++ F
Sbjct: 108 LFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYS 167
Query: 87 KCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA----D 140
+C L+ A ++FDE ++ D+ WN+++ + G VLRLF M VG+ A
Sbjct: 168 RCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELT 227
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
+ +V+ ++ K+ ++ VH I G++A ++ N+ ++ Y KC +L+ A +F
Sbjct: 228 YASVVNACGSSGEEKYGAM---VHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFE 283
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCPE 258
I + VVSWN+M+A + +++L +R M+ + + T +SLLS+
Sbjct: 284 RISR--KDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLS 341
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL GR +H+H ++D S+ N+LI+ YSKC ++ AR +F+ + R +SW +M++
Sbjct: 342 ALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLA 401
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPD--LVTVLSMISGCGQSGAL--ELGKWFDNY---- 370
GY Q +F M +G PD +T++ + SG + GK Y
Sbjct: 402 GYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR 461
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
GG+ ++ V NA++ MY+K I DA ++F + + SW M+ G + N +F +
Sbjct: 462 ITPGGV--SLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDV 519
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII----------QYDDKGISY 480
L +F +++ + V+ +L +C L+ G + + D +S
Sbjct: 520 LMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSI 579
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
N + + + + G +K+A M + D W ++ C H
Sbjct: 580 N------NALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGCAHH 621
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%), Gaps = 42/319 (13%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK-LSDLIY---SQ 74
I WNS + + + +F++M + IEP++ + I A ++ S LIY +
Sbjct: 393 IISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGK 452
Query: 75 MIHGHIVK--SP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
IHG+I++ +P + K +R+ A KIF M RD SWNAM+ G+++
Sbjct: 453 EIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSR 512
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-------G 171
E+VL +F ++ G D V++ L + L L K H+ +
Sbjct: 513 NAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPH 572
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
D+ +S+ N IS Y+KC +K A VF +E + V SW +M+ GC + ++L
Sbjct: 573 QDSLLSINNALISMYSKCGSIKDAAQVFLKMER--KDVFSWTAMITGCAHHGLAVEALQL 630
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH-------YGFDLDVSVINT 284
+ M +G + + T ++LL A G LV + YG +
Sbjct: 631 FERMKTDGIKPNQVTFLALLM------ACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYAC 684
Query: 285 LISMYSKCGDIDSARVLFD 303
+I ++ + G D A+ L +
Sbjct: 685 MIDLFGRSGQFDRAKSLVE 703
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
F N+ S C+ + S+ + A++LF P + V+SW+ +IA + G
Sbjct: 42 FQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGN 101
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE-----KGWAISIIQYDDKGISYN 481
F +A LF ++M L+PN + ++L+ TG + GW+I D GI
Sbjct: 102 FAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIR-- 159
Query: 482 PELDHYSCMADLLGRKGKLKEALD-FVQSMPIKSDAGIWGTLLCACKIH 529
+ + R G L++A F ++ + D +W +++ A H
Sbjct: 160 ------AAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFH 202
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 290/556 (52%), Gaps = 33/556 (5%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +F+ + ++ WN M G A + L+L+ M +G+ + T L
Sbjct: 39 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 98
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--- 205
++ +K + +H + +G D D+ V + IS Y + L+ A VF R
Sbjct: 99 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVV 158
Query: 206 --------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
++ VVSWN+M++G + ++L ++ MM
Sbjct: 159 SYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 218
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R D +T+V+++S+ ++ GR VHS +GF ++ ++N LI +YSKCG++++A
Sbjct: 219 VRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETAC 278
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF+G+ + +SW +I GY EAL LF M +GE P+ VT+LS++ C G
Sbjct: 279 GLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 338
Query: 360 ALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
A+++G+W Y G+ + + +LIDMY+KCG I A ++F ++ K + SW M
Sbjct: 339 AIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 398
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I G A++G + D+F ++ + + P+ +TF+ +L AC+H+G L+ G I D
Sbjct: 399 IFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYK 458
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
++ P+L+HY CM DLLG G KEA + + +M ++ D IW +LL ACK+H N+E+GE
Sbjct: 459 MT--PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGES 516
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A L K+EP + YV ++N YA GRW+ VAN R ++ +KK PG S I+
Sbjct: 517 FAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVH 576
Query: 598 TFTAEDRYHAESELTY 613
F D++H + Y
Sbjct: 577 EFIIGDKFHPRNREIY 592
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 225/466 (48%), Gaps = 56/466 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R ++ L L+ M + PN+ TFPF+ K+CAK Q IHGH++
Sbjct: 59 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 118
Query: 82 K--------------SPFVKCDRLDCAYKI------------------------------ 97
K S +V+ RL+ A+K+
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQK 178
Query: 98 -FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
FDE+ V+DV SWNAM+ G+A+ G + L LF +M ++ D T++ + A +
Sbjct: 179 MFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 238
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
+ L + VHS+ G +++ + N I Y+KC +L+ A CG+ E L + V+SWN+
Sbjct: 239 IELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETA----CGLFEGLPYKDVISWNT 294
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIH 272
++ G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H +
Sbjct: 295 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 354
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G S+ +LI MY+KCGDI++A +F+ I ++ SW AMI G+A G D + +
Sbjct: 355 KGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDI 414
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYS 391
F M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 415 FSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLG 474
Query: 392 KCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
G +A E+ + E V W +++ C ++G VE + F Q
Sbjct: 475 HSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN-VELGESFAQ 519
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 39/303 (12%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS---ARVLFDGICDRTRVSWTAMISGY 320
R++H+ I G ++ LI D A +F+ I + + W M G+
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
A D AL+L+ M + G LP+ T ++ C +S A + G+ + G ++
Sbjct: 67 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT------------------------ 416
V +LI MY + G + DA ++F P + VVS+T
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186
Query: 417 -------MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
MI+G A G + EAL+LF +M+ ++RP+ T + V+ AC +G +E G +
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 246
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
DD G N L + + DL + G+L+ A + +P K D W TL+ H
Sbjct: 247 -SWIDDHGFGSN--LKIVNALIDLYSKCGELETACGLFEGLPYK-DVISWNTLI-GGYTH 301
Query: 530 LNI 532
+N+
Sbjct: 302 MNL 304
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 301/609 (49%), Gaps = 52/609 (8%)
Query: 62 KACAKLSDL--IYSQMIHGHIVKSPFV-----------KCDRLDCAYKIFDEMAVRDVAS 108
+AC ++ + I++QMI ++ F + LD KI + A + S
Sbjct: 62 EACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFS 121
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
WN + G+ + N + L+ NM G D T L + +
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
I +G D+D+ V N I C +L A +F E +R +VSWNS++ G D+
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLF--DESCVRDLVSWNSIINGYVRCGLADE 239
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+ + Y M D T++ ++S+ E L GR +H G +L V + N L+
Sbjct: 240 AFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMD 299
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD-------------------- 327
MY KC +I++A++LF+ + +T VSWT M+ GYA+ G L+
Sbjct: 300 MYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNAL 359
Query: 328 -----------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
EAL LF M+A+ PD +TV++ +S C Q GAL++G W +Y L
Sbjct: 360 IGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNL 419
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
NV + AL+DMY+KCG+I A ++F +P + ++WT +I G AL+G+ A+ F +
Sbjct: 420 TMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSE 479
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
++ + L P+ +TF+ VL AC H G +++G GIS P+L HYSC+ DLLGR
Sbjct: 480 MISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGIS--PKLKHYSCLVDLLGR 537
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G L+EA + ++SMP + DA +WG L +IH N+ +GE A L +L+PH YV +
Sbjct: 538 AGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLL 597
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
AN Y W+ +R MM+ V+K PG S +NG F D+ H +SE Y
Sbjct: 598 ANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIY--- 654
Query: 617 DCLALHSRE 625
+CL +R+
Sbjct: 655 ECLTRLTRQ 663
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 218/466 (46%), Gaps = 46/466 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN IR V +LL+R M ++ P+N T+P + K CA S + I GH+
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
++ F V C L A K+FDE VRD+ SWN+++ G+ + G +
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L+Y M + + D VT++G+ A+ ++L+L + +H +G++ V + N + Y
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMY 301
Query: 187 AKCDDLKMAELVFCGIEERL-----------------------------RTVVSWNSMVA 217
KC +++ A+++F + ++ + VV WN+++
Sbjct: 302 IKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIG 361
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G + ++L + M + D TVV+ LS+ AL G +H + + +
Sbjct: 362 GFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM 421
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+V++ L+ MY+KCG+I A +F+ + R ++WTA+I G A G A+ F M
Sbjct: 422 NVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMI 481
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G +PD +T + ++S C G ++ G+ +F G+ + + L+D+ + G +
Sbjct: 482 SIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFL 541
Query: 397 GDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+A EL ++P E V W + G ++G +L+ELD
Sbjct: 542 EEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELD 587
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 292/560 (52%), Gaps = 11/560 (1%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ S + KC + A K+F E + RD SWN M+ GF +G E L +M+ G D
Sbjct: 40 IISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVD 99
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
+ + + ++ + + VHS + +G + +V + + YAKC+ ++ A VF
Sbjct: 100 GYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFK 159
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH--MMYNGFRLDVTTVVSLLSSFVCPE 258
I +R V+WN++++G Y D F+ M G +D T LL+ P+
Sbjct: 160 SI--NIRNSVTWNALISG--YAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPD 215
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC---DRTRVSWTA 315
VH+ + +G D +V N +I+ YS+CG I+ A +FDG D VSW +
Sbjct: 216 LHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNS 275
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+++G++Q G ++AL+ F M + + D +++ C L+LG+ G
Sbjct: 276 ILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSG 335
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+ N V ++LI MYSKCG I DAR+ F A P+ ++W ++I G A +G ALDLF
Sbjct: 336 FEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFF 395
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+ + ++ + +TF+AVL AC+H G +E+GW+ D GI P ++HY+CM DLLG
Sbjct: 396 LMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIP--PRMEHYACMIDLLG 453
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G+L EA +++MP + DA +W TLL AC+ +IE+ VA L +LEP YV
Sbjct: 454 RAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVL 513
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
+++ + RW+ A+I+ +MK VKK PG S + + +F AEDR H E Y
Sbjct: 514 LSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLR 573
Query: 616 LDCLALHSREEAYSSHLKWI 635
L L R Y ++ +++
Sbjct: 574 LGELMEEIRRLDYVANSEFL 593
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 209/437 (47%), Gaps = 17/437 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I VN L + MK+ + +F I K A + + Q +H +V
Sbjct: 68 WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMV 127
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC+R++ A+++F + +R+ +WNA++ G+AQ+G
Sbjct: 128 KMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFW 187
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M L G++ D T L L VH+ + G+ +D +VCN I++Y+
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247
Query: 188 KCDDLKMAELVFCG-IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C ++ AE VF G IE R VSWNS++ G + +D+L F+ +M +D
Sbjct: 248 ECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYA 307
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
++L S L G+ VH + GF+ + V ++LI MYSKCG I+ AR FD
Sbjct: 308 FSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATP 367
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ ++W ++I GYAQ G AL LFF M+ D +T +++++ C G +E G
Sbjct: 368 KDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWS 427
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+ + G+ + +ID+ + G + +A+ L A+P E + W T++ C
Sbjct: 428 FLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTC 487
Query: 425 GEFVEALDLFHQLMELD 441
G+ A + L+EL+
Sbjct: 488 GDIELASQVASHLLELE 504
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 5/311 (1%)
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H I G A + N IS YAKC ++++A +F E R VSWN+M+AG
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFG--ETSQRDAVSWNTMIAGFVNLG 79
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
F+ +L F + M GF +D + S+L C + G+ VHS + G++ +V +
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGS 139
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MY+KC ++ A +F I R V+W A+ISGYAQ GD A L ME G
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEI 199
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T +++ +L GL + VCNA+I YS+CGSI DA +F
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259
Query: 404 YALPEKIV---VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
E VSW +++ G + +G +AL F + + + F AVL++C+
Sbjct: 260 DGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 319
Query: 461 FLEKGWAISII 471
L+ G + ++
Sbjct: 320 TLQLGQQVHVL 330
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
SSF AL + + H I G + N +IS Y+KCG+I A +F R V
Sbjct: 10 SSFT---ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAV 66
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SW MI+G+ G+ + AL +M+ G D + S++ G G +E+G+ +
Sbjct: 67 SWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMM 126
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G + NV +AL+DMY+KC + DA E+F ++ + V+W +I+G A G+
Sbjct: 127 VKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGD 181
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
A G ++ N +I Y+KCG I A ++F ++ VSW TMIAG G F A
Sbjct: 25 AIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETA 84
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
L+ + + +F ++L+ G++E G + + + Y + S +
Sbjct: 85 LEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVK---MGYEGNVFAGSAL 141
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
D+ + ++++A + +S+ I++ W L+
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSV-TWNALI 173
>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 584
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 269/507 (53%), Gaps = 12/507 (2%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQM-----GFLENVLRLFYNMRLVGIQADFVTVM 145
L A ++FD RD WN +L A L+L+ MR G+ D T
Sbjct: 70 LAYARRVFDAAPRRDAYMWNTLLRAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYP 129
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE- 204
+ A A+ L ++ H + + D V + I+ Y + D+ AE VF
Sbjct: 130 IVLPACAAARAPRLGRAAHGDAVRFALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAV 189
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
RTVVSW +MVAG F ++ + M+ G + T++S L E L G
Sbjct: 190 GARTVVSWTAMVAGYAQNCLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGE 249
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+VH + GFD ++ ++N LI+MY KCG I +A+ LFDG+ T VSW M++ Y Q G
Sbjct: 250 MVHGFVVKLGFDANLPLVNALIAMYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNG 309
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
D A++ F M + D VT++S++S C + GALE GKW A S GL + + N
Sbjct: 310 DGVRAIKFFHRMLSEKVGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGN 369
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
L+DMY+KCG I AR+ F L E VVSW+ MI+ A +GE EAL+LF + + ++P
Sbjct: 370 VLVDMYAKCGEIAYARQAFDGLREPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKP 429
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
N T AVL AC H+G +++G AI SI++ D IS P L++Y+CM D+LGR G+L E
Sbjct: 430 NSFTLTAVLVACGHSGLVDEGLAIFNSIVR--DYHIS--PTLENYACMVDMLGRAGRLVE 485
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A + ++ M ++ D IWG L C++H N+E+ E+VA LF+ + YV MAN Y
Sbjct: 486 AYEIIRGMSMQPDKCIWGAFLGGCRLHGNLELAEFVAKDLFQSGSNDVTFYVLMANMYFE 545
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSL 589
G + R MK ++KK G SL
Sbjct: 546 AGMLEDAERTRRAMKEMELKKTAGHSL 572
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 219/476 (46%), Gaps = 68/476 (14%)
Query: 22 WNSQIR-----EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
WN+ +R +A + A L L+++M+ + P+ T+P + ACA +
Sbjct: 88 WNTLLRAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAA 147
Query: 77 HGHIVKSPFVK------------CDRLDC--AYKIF---DEMAVRDVASWNAMLVGFAQM 119
HG V+ + C D A ++F + R V SW AM+ G+AQ
Sbjct: 148 HGDAVRFALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQN 207
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ +F M G+ + +T++ + L+ + VH F + +G DA++ +
Sbjct: 208 CLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLV 267
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I+ Y KC + A+ +F G+ TVVSWN+MVA ++ F+ M+
Sbjct: 268 NALIAMYGKCGSIAAAKELFDGMAA--HTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEK 325
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D T+VS+LS+ AL G+ VH G D D + N L+ MY+KCG+I AR
Sbjct: 326 VGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYAR 385
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
FDG+ + VSW+AMIS YA G+ +EAL LF AM+ G P+ T+ +++ CG SG
Sbjct: 386 QAFDGLREPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSG 445
Query: 360 ALELG--------------KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
++ G +NYAC ++DM + G + +A E+
Sbjct: 446 LVDEGLAIFNSIVRDYHISPTLENYAC-------------MVDMLGRAGRLVEAYEIIRG 492
Query: 406 L---PEKIVVSWTTMIAGCALNG-----EFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ P+K + W + GC L+G EFV A DLF N VTF ++
Sbjct: 493 MSMQPDKCI--WGAFLGGCRLHGNLELAEFV-AKDLFQS------GSNDVTFYVLM 539
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 182/385 (47%), Gaps = 23/385 (5%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L +H+ + +GV A+ + +++ A C L A VF R WN+++
Sbjct: 36 LRALLPIHARAVLLGVAANPAFATRLLAAAAPCS-LAYARRVFDAAPRR--DAYMWNTLL 92
Query: 217 -----AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
A G +L Y+ M G D T +L + A GR H +
Sbjct: 93 RAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAV 152
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLF---DGICDRTRVSWTAMISGYAQKGDLDE 328
+ D V + LI+MY + GD+ A +F + RT VSWTAM++GYAQ +
Sbjct: 153 RFALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQ 212
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
A+ +F AM A G LP+ +T++S + L G+ + G N+ + NALI
Sbjct: 213 AVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIA 272
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY KCGSI A+ELF + VVSW TM+A NG+ V A+ FH+++ + + VT
Sbjct: 273 MYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVT 332
Query: 449 FLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL---KEAL 504
++VL ACT G LE G W + + +G+ + + + + D+ + G++ ++A
Sbjct: 333 LVSVLSACTRQGALETGKWVHELAR--SRGLDTDARIGN--VLVDMYAKCGEIAYARQAF 388
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
D ++ + S W ++ A H
Sbjct: 389 DGLREPGVVS----WSAMISAYANH 409
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 159/408 (38%), Gaps = 52/408 (12%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ T+ W + + + + +F M + PN +T L +M
Sbjct: 191 ARTVVSWTAMVAGYAQNCLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEM 250
Query: 76 IHGHIVKS------PFV--------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG +VK P V KC + A ++FD MA V SWN M+ + Q G
Sbjct: 251 VHGFVVKLGFDANLPLVNALIAMYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGD 310
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
++ F+ M + D VT++ + A L K VH G+D D + N
Sbjct: 311 GVRAIKFFHRMLSEKVGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNV 370
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YAKC ++ A F G+ E VVSW++M++ + +++LN + M G +
Sbjct: 371 LVDMYAKCGEIAYARQAFDGLRE--PGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVK 428
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARV 300
+ T+ ++L + C H G D +++ N+++ Y ++
Sbjct: 429 PNSFTLTAVLVA--CG--------------HSGLVDEGLAIFNSIVRDYHISPTLE---- 468
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
++ M+ + G L EA + M PD + + GC G
Sbjct: 469 -----------NYACMVDMLGRAGRLVEAYEIIRGMSMQ---PDKCIWGAFLGGCRLHGN 514
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
LEL ++ G D V + +MY + G + DA A+ E
Sbjct: 515 LELAEFVAKDLFQSGSND-VTFYVLMANMYFEAGMLEDAERTRRAMKE 561
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 196/641 (30%), Positives = 318/641 (49%), Gaps = 27/641 (4%)
Query: 22 WNSQI---REAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
WNS I + + ++ + LFR+M+ DI PN T I KA + L + H
Sbjct: 83 WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE- 123
+VK + K ++ K+F M R+ +W+ M+ G+A G +E
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 124 --NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
V LF + G +D+V L+ A ++ L + +H I G+ V++ N
Sbjct: 203 AIKVFNLFLREKEEGSDSDYVFTAVLSSLAA-TIYVGLGRQIHCITIKNGLLGFVALSNA 261
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ Y+KC+ L A +F +R ++W++MV G + + +++ + M G +
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDR--NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T+V +L++ L +G+ +HS + GF+ + L+ MY+K G + AR
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + +R WT++ISGY Q D +EAL L+ M+ AG +P+ T+ S++ C L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
ELGK + G V + +AL MYSKCGS+ D +F P K VVSW MI+G
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+ NG+ EAL+LF +++ + P+ VTF+ ++ AC+H GF+E+GW + D G+ +
Sbjct: 500 SHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGL--D 557
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P++DHY+CM DLL R G+LKEA +F++S I +W LL ACK H E+G Y
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEK 617
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L L ++ YV+++ Y GR V + M+ N V K G S + + F
Sbjct: 618 LMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVV 677
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHL--KWIPEHEA 640
D H E T ++ ++ EE + + L ++ E E
Sbjct: 678 GDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEEG 718
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 223/439 (50%), Gaps = 23/439 (5%)
Query: 47 QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLD 92
Q ++ P+ T ++ +L+ + +HG I+++ + KC +L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 93 CAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN---VLRLFYNMRLVGIQADFVTVMGLTQ 149
A+ IF+ + +DV SWN+++ G++Q G + + V++LF MR I + T+ G+ +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A + ++ + H+ + + D+ V + + Y K ++ VF + E R
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE--RNT 184
Query: 210 VSWNSMVAGCTYGDKFDDSL---NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+W++MV+G + ++++ N + G D ++LSS + GR +
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQI 243
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H I G V++ N L++MYSKC ++ A +FD DR ++W+AM++GY+Q G+
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
EA++LF M +AG P T++ +++ C LE GK ++ G + ++ AL
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+K G + DAR+ F L E+ V WT++I+G N + EAL L+ ++ + PN
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 447 VTFLAVLQACTHTGFLEKG 465
T +VL+AC+ LE G
Sbjct: 424 PTMASVLKACSSLATLELG 442
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 5/233 (2%)
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+T++ L+ LV GR VH I G + N L++ Y+KCG + A +F+
Sbjct: 14 TSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFN 73
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEA---LRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
I + VSW ++I+GY+Q G + + ++LF M A LP+ T+ + +
Sbjct: 74 AIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQS 133
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+G+ ++ V +L+ MY K G + D ++F +PE+ +W+TM++G
Sbjct: 134 STVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSG 193
Query: 421 CALNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
A G EA+ +F+ + + + + F AVL + T ++ G I I
Sbjct: 194 YATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 195/630 (30%), Positives = 308/630 (48%), Gaps = 40/630 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V N L F++M++ + + + + ++CA LS+L +H H +
Sbjct: 207 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 266
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KCD + A +FD + S+NAM+ G++Q L
Sbjct: 267 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 326
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ + G+ D +++ G+ +A K LS ++ I + DV V N I Y
Sbjct: 327 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 386
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A VF E R R VSWN+++A K ++L + M+ + D T
Sbjct: 387 KCQALAEAFRVF--DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 444
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +L G +HS + G + SV +LI MYSKCG I+ A +
Sbjct: 445 GSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 503
Query: 308 RTRVS--------------------WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
R VS W ++ISGY K ++A LF M G PD T
Sbjct: 504 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 563
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+++ C + LGK L+ +V +C+ L+DMYSKCG + D+R +F
Sbjct: 564 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 623
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ V+W MI G A +G+ EA+ LF +++ +++PN VTF+++L+AC H G ++KG
Sbjct: 624 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 683
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ D G+ +P+L HYS M D+LG+ GK+K AL+ ++ MP ++D IW TLL C
Sbjct: 684 YFYMMKRDYGL--DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 741
Query: 528 IHL-NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
IH N+E+ E L +L+P ++ Y ++N YA G W+ V+++R M+ ++KK PG
Sbjct: 742 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 801
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVL 616
S + + F D+ H E Y L
Sbjct: 802 CSWVELKDELHVFLVGDKAHPRWEEIYEEL 831
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 214/440 (48%), Gaps = 17/440 (3%)
Query: 67 LSDLI-YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
L D++ +++MI+G+ + K A F+ M VRDV SWN+ML G+ Q G
Sbjct: 69 LRDVVSWNKMINGYSKSNDMFK------ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 122
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ +F +M GI+ D T + + + SL +H + +G D DV + +
Sbjct: 123 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDM 182
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAK + VF GI E+ VSW++++AGC + +L F++ M + +
Sbjct: 183 YAKGKRFVESLRVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 240
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
S+L S L G +H+H + F D V + MY+KC ++ A++LFD
Sbjct: 241 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 300
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ R S+ AMI+GY+Q+ +AL LF + ++G D +++ + C L G
Sbjct: 301 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 360
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
A L +V V NA IDMY KC ++ +A +F + + VSW +IA NG
Sbjct: 361 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 420
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPE 483
+ E L LF ++ + P+ TF ++L+ACT G L G I SI++ G++ N
Sbjct: 421 KGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK---SGMASNSS 476
Query: 484 LDHYSCMADLLGRKGKLKEA 503
+ + D+ + G ++EA
Sbjct: 477 VG--CSLIDMYSKCGMIEEA 494
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 239/545 (43%), Gaps = 47/545 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + E+ K++ +F M + IE + TF I K C+ L D IHG +V
Sbjct: 106 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 165
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K R + ++F + ++ SW+A++ G Q L L+
Sbjct: 166 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 225
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M+ V + ++ L L +H+ + AD V + YA
Sbjct: 226 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 285
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KCD+++ A+++F E R S+N+M+ G + + +L + +M +G D ++
Sbjct: 286 KCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ + + L +G ++ I LDV V N I MY KC + A +FD +
Sbjct: 344 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 403
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ + Q G E L LF +M + PD T S++ C G+L G
Sbjct: 404 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEI 462
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL---FYALP----------------- 407
+ G+ N V +LIDMYSKCG I +A ++ F+
Sbjct: 463 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 522
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+++ VSW ++I+G + + +A LF ++ME+ + P++ T+ VL C + G
Sbjct: 523 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG-- 580
Query: 468 ISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLC 524
Q + I + D Y C + D+ + G L ++ L F +S ++ D W ++C
Sbjct: 581 ---KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS--LRRDFVTWNAMIC 635
Query: 525 ACKIH 529
H
Sbjct: 636 GYAHH 640
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 39/242 (16%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL G+ H+H I GF V+N L+ +Y+ D SA ++FD + R VSW MI+
Sbjct: 21 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 80
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG----ALEL-------GKWF 367
GY++ D+ +A F M + D+V+ SM+SG Q+G ++E+ G F
Sbjct: 81 GYSKSNDMFKANSFFNMM----PVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 136
Query: 368 DNYA-------CS-----------------GGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D CS G +V+ +AL+DMY+K ++ +F
Sbjct: 137 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 196
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+PEK VSW+ +IAGC N AL F ++ +++ ++ + +VL++C L
Sbjct: 197 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 256
Query: 464 KG 465
G
Sbjct: 257 LG 258
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNAL---------------------------- 386
C + GALELGK + G + V N L
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 387 ---IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
I+ YSK + A F +P + VVSW +M++G NGE ++++++F + +
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
+ TF +L+ C+ FLE I + + ++ S + D+ + + E+
Sbjct: 136 FDGRTFAIILKVCS---FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 192
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
L Q +P K+ W ++ C
Sbjct: 193 LRVFQGIPEKNSVS-WSAIIAGC 214
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 188/624 (30%), Positives = 317/624 (50%), Gaps = 23/624 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I + + L ++ +++ + I P++ T + A A L + Q +HG
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFT 233
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+KS ++K R A ++FDEM VRD ++N M+ G+ ++ +E +
Sbjct: 234 LKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESV 293
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
++F L + D +TV + A H + LSL K ++++ + G + +V N I Y
Sbjct: 294 KMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVY 352
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC D+ A VF +E + VSWNS+++G +++ ++ MM + D T
Sbjct: 353 AKCGDMITARDVFNSME--CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ L+S L G+ +HS+GI G +D+SV N LI MY+KCG++ + +F+ +
Sbjct: 411 YLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG 470
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
V+W +IS + GD L++ M +PD+ T L + C A LGK
Sbjct: 471 TLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G + + + NALI+MYSKCG + + +F + + VV+WT MI + GE
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPEL 484
+AL+ F + + + P+ V F+A++ AC+H+G +EKG A ++ Y +P +
Sbjct: 591 GEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLAC----FEKMKTHYKIDPMI 646
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+C+ DLL R K+ +A +F+Q+MPI+ DA IW ++L AC+ ++E E V+ + +
Sbjct: 647 EHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIE 706
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L P + +N YA +WD V+ IR ++ +KK PG S I K F + D
Sbjct: 707 LNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDD 766
Query: 605 YHAESELTYPVLDCLALHSREEAY 628
+SE + L+ L +E Y
Sbjct: 767 SAPQSEAIHKSLEILYSLMAKEGY 790
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/532 (28%), Positives = 268/532 (50%), Gaps = 25/532 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA---- 65
R+ + + WNS IR K L + +++++ + P+ TFP + KACA
Sbjct: 62 FRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFD 121
Query: 66 -KLSDLIYSQMIH---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
++ DL+Y Q++ G+ + + + L A ++FDEM VRD+ SWN+++ G
Sbjct: 122 AEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISG 181
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
++ G+ E L +++ +R I D TV + A + + + +H F + GV++
Sbjct: 182 YSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSV 241
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V N ++ Y K A VF E +R V++N+M+ G + ++S+ +
Sbjct: 242 SVVNNGLLAMYLKFSRPTDARRVF--DEMVVRDSVTYNTMICGYLKLEMVEESVKMFLEN 299
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ + F+ D+ TV S+L + L + ++++ + GF L+ +V N LI +Y+KCGD+
Sbjct: 300 L-DQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDM 358
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+AR +F+ + + VSW ++ISGY Q GDL EA++LF M E D +T L +IS
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLS 418
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+ L+ GK + G+ ++ V NALIDMY+KCG +GD+ ++F ++ V+W
Sbjct: 419 TRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWN 478
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQY 473
T+I+ C G+F L + Q+ + + P+ TFL L C G I ++++
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
Y EL + + ++ + G L+ + + M + D W ++ A
Sbjct: 539 -----GYESELQIGNALIEMYSKCGCLESSFRVFERMS-RRDVVTWTGMIYA 584
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 4/313 (1%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+++A + +L+ L+ +H+ I +G+D I Y+ + VF +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSP-A 68
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ V WNS++ + F +L FY + + D T S++ + G LV
Sbjct: 69 KNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
+ + GF+ D+ V N L+ MYS+ G + AR +FD + R VSW ++ISGY+ G
Sbjct: 129 YKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EAL ++ + + +PD TV S++ ++ G+ + G+ +V N L
Sbjct: 189 EEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGL 248
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRPN 445
+ MY K DAR +F + + V++ TMI G L E V E++ +F + ++ +P+
Sbjct: 249 LAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICG-YLKLEMVEESVKMFLENLD-QFKPD 306
Query: 446 RVTFLAVLQACTH 458
+T +VL AC H
Sbjct: 307 ILTVTSVLCACGH 319
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 296/607 (48%), Gaps = 54/607 (8%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+VK +D A K+FDE+ R+ +W ++ GF++ G E V +LF MR G + T+
Sbjct: 334 YVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTL 393
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
L + +L L K VH++ + G+DADV + N+ + Y KC + AE VF + E
Sbjct: 394 SSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNE 453
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-------------------------- 238
VVSWN M++ + SL+ +R + Y
Sbjct: 454 G--DVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLY 511
Query: 239 -----GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
G V T L + GR +H + +GF D + ++L+ MY KCG
Sbjct: 512 CMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCG 571
Query: 294 DIDSARVLFDGI-------------CDRTR---VSWTAMISGYAQKGDLDEALRLFFAME 337
+D+A ++ + C + VSW M+SGY G ++ L+ F M
Sbjct: 572 RMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMV 631
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+ D+ TV ++IS C +G LE G+ Y G + + V ++LIDMYSK GS+
Sbjct: 632 RELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLD 691
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
DA +F E +V WT+MI+GCAL+G+ +A+ LF +++ + PN VTFL VL AC
Sbjct: 692 DAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACC 751
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
H G LE+G + D I NP ++H + M DL GR G L E +F+ I
Sbjct: 752 HAGLLEEGCRYFRMMKDAYCI--NPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTS 809
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK 577
+W + L +C++H N+E+G++V+ L ++ P YV ++N A RWD A +R++M
Sbjct: 810 VWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMH 869
Query: 578 RNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI-- 635
+ +KK PGQS + + TF DR H + E Y LD L +E YS +K +
Sbjct: 870 QRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQ 929
Query: 636 -PEHEAG 641
E E G
Sbjct: 930 DVEEEQG 936
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 190/449 (42%), Gaps = 69/449 (15%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--------------GHIVKSPFV 86
LFR+M+ PN T + K C+ +L + +H G+ + ++
Sbjct: 377 LFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYL 436
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLV-------------------------------G 115
KC + A ++F+ M DV SWN M+ G
Sbjct: 437 KCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDG 496
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
Q G+ L Y M G + VT + + L + +H + G D
Sbjct: 497 LMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRD 556
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGI--------------EERLRTVVSWNSMVAGCTY 221
+ ++ + Y KC + A +V + +E +VSW MV+G +
Sbjct: 557 GFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVW 616
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
K++D L +R M+ +D+ TV +++S+ L GR VH++ G +D V
Sbjct: 617 NGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYV 676
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
++LI MYSK G +D A +F + V WT+MISG A G +A+ LF M G
Sbjct: 677 GSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGI 736
Query: 342 LPDLVTVLSMISGCGQSGALELG-KWF----DNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+P+ VT L +++ C +G LE G ++F D Y + G++ C +++D+Y + G +
Sbjct: 737 IPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEH----CTSMVDLYGRAGHL 792
Query: 397 GDARE-LFYALPEKIVVSWTTMIAGCALN 424
+ + +F + W + ++ C L+
Sbjct: 793 TETKNFIFENGISHLTSVWKSFLSSCRLH 821
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+ + G ++ N L+++Y K ++D AR LFD I R +WT +ISG+++ G
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ +LF M A G P+ T+ S+ C L+LGK + G+ +V++ N+
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
++D+Y KC A +F + E VVSW MI+ G+ ++LD+F +L D+
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDV 487
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 173/427 (40%), Gaps = 73/427 (17%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
L ++H+ + G ++ N ++ Y K ++ A +F I +R +W +++G
Sbjct: 308 LGTLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQR--NTQTWTILISGF 365
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ + +R M G + T+ SL L G+ VH+ + G D DV
Sbjct: 366 SRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADV 425
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF------ 333
+ N+++ +Y KC + A +F+ + + VSW MIS Y + GD++++L +F
Sbjct: 426 VLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYK 485
Query: 334 -------------------------FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+ M G +VT + +ELG+
Sbjct: 486 DVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLH 545
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP----------------EKIVV 412
G + + ++L++MY KCG + +A + +P + +V
Sbjct: 546 GMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIV 605
Query: 413 SWTTMIAGCALNGEFVEALDLF----HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
SW M++G NG++ + L F +L+ +D+R T ++ AC + G LE G +
Sbjct: 606 SWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIR----TVTTIISACANAGILEFGRHV 661
Query: 469 SIIQYDDKGISYNPELDHY------SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
+YN ++ H S + D+ + G L +A + + + W ++
Sbjct: 662 H---------AYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTN-EPNIVFWTSM 711
Query: 523 LCACKIH 529
+ C +H
Sbjct: 712 ISGCALH 718
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 30/223 (13%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH- 77
I W + V + L FR M + + + T I ACA L + + +H
Sbjct: 604 IVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHA 663
Query: 78 -----GHIVKS--------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
GH + + + K LD A+ IF + ++ W +M+ G A G +
Sbjct: 664 YNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQ 723
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDADVS 177
+ LF M GI + VT +G+ A HA ++ ++K + ++ V
Sbjct: 724 AICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYC------INPGVE 777
Query: 178 VCNTWISSYAKCDDL-KMAELVFCGIEERLRTVVSWNSMVAGC 219
C + + Y + L + +F L +V W S ++ C
Sbjct: 778 HCTSMVDLYGRAGHLTETKNFIFENGISHLTSV--WKSFLSSC 818
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 282/549 (51%), Gaps = 22/549 (4%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVAS 108
KAC + +D Y + +H +VK+ + K L+ A K+FD + R+V S
Sbjct: 131 KACVRSADFRYGRRLHCDVVKAGGADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVS 190
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
W +ML G Q G E L LF MR + T++ + A L + +H I
Sbjct: 191 WTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVI 250
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
G+ + + + + YAKC+ ++ A VF +E +V W +M+ G T + D+
Sbjct: 251 KYGLSTNSFISASLLDMYAKCEKVEDARRVFDELE--FVDIVLWTAMIVGYTQNKRPLDA 308
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
L + H + + T+ +++S+ L GR VH+ G+ G V N L+ M
Sbjct: 309 LQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDM 368
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y+KC + A +F I + V+W +M++GY++ G +E+L LF M G PD ++V
Sbjct: 369 YAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISV 428
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
++ +S C L +GK F YA N+ V AL+++YSKC + A+ +F + +
Sbjct: 429 VNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTD 488
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ V+W+ MI G + G+ ++DLF+++++ ++ PN V F ++L AC+HTG + G
Sbjct: 489 RNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEY 548
Query: 469 SIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+D +N P + HY+CM D++ R G L+EAL+F+Q+MPIK+ +WG+ L C
Sbjct: 549 ----FDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGC 604
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
K+H +E GE + L P + YV M+N Y GRWD IR M+ + K PG
Sbjct: 605 KLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPG 664
Query: 587 -QSLFHING 594
S+ H NG
Sbjct: 665 CSSVGHENG 673
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 225/427 (52%), Gaps = 20/427 (4%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W S + ++ A + L+LF +M+Q+++ P+ T + ACA L L + IHG +
Sbjct: 190 SWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSV 249
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+K + KC++++ A ++FDE+ D+ W AM+VG+ Q + L
Sbjct: 250 IKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDAL 309
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+LF + + V I + VT+ + A+ +HL L +SVH+ G+ +G V N + Y
Sbjct: 310 QLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMY 369
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC L A +F I ++ VV+WNSM+AG + ++SL + M G D +
Sbjct: 370 AKCQALPEANSIFGRI--LIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAIS 427
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
VV+ LS+ VC L G+ H++ I Y F ++ V L+++YSKC D+ SA+ +F+ +
Sbjct: 428 VVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMT 487
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK- 365
DR V+W+AMI GY +GD ++ LF M P+ V S++S C +G + GK
Sbjct: 488 DRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKE 547
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN 424
+FD+ A + ++ ++D+ ++ G++ +A E +P K +S W + + GC L+
Sbjct: 548 YFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLH 607
Query: 425 G--EFVE 429
EF E
Sbjct: 608 SRLEFGE 614
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME---AAGE 341
L+S Y+ GD+ SAR + DG ++ M+ G +A+ L M A
Sbjct: 61 LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
D+V L++ C +S G+ G D V N+L+DMY+K G + +AR+
Sbjct: 121 QADVVLSLAL-KACVRSADFRYGRRLHCDVVKAGGADG-FVMNSLVDMYAKAGDLENARK 178
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F +PE+ VVSWT+M++G NG E L LF+++ + ++ P+ T ++VL AC G
Sbjct: 179 VFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGG 238
Query: 462 LEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
L +G I S+I+Y G+S N + + + D+ + K+++A
Sbjct: 239 LHQGRWIHGSVIKY---GLSTNSFIS--ASLLDMYAKCEKVEDA 277
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/630 (30%), Positives = 308/630 (48%), Gaps = 40/630 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V N L F++M++ + + + + ++CA LS+L +H H +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KCD + A +FD + S+NAM+ G++Q L
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ + G+ D +++ G+ +A K LS ++ I + DV V N I Y
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A VF E R R VSWN+++A K ++L + M+ + D T
Sbjct: 429 KCQALAEAFRVF--DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +L G +HS + G + SV +LI MYSKCG I+ A +
Sbjct: 487 GSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 308 RTRVS--------------------WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
R VS W ++ISGY K ++A LF M G PD T
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+++ C + LGK L+ +V +C+ L+DMYSKCG + D+R +F
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ V+W MI G A +G+ EA+ LF +++ +++PN VTF+++L+AC H G ++KG
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ D G+ +P+L HYS M D+LG+ GK+K AL+ ++ MP ++D IW TLL C
Sbjct: 726 YFYMMKRDYGL--DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
Query: 528 IHL-NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
IH N+E+ E L +L+P ++ Y ++N YA G W+ V+++R M+ ++KK PG
Sbjct: 784 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 843
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVL 616
S + + F D+ H E Y L
Sbjct: 844 CSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 214/440 (48%), Gaps = 17/440 (3%)
Query: 67 LSDLI-YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
L D++ +++MI+G+ + K A F+ M VRDV SWN+ML G+ Q G
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFK------ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ +F +M GI+ D T + + + SL +H + +G D DV + +
Sbjct: 165 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDM 224
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAK + VF GI E+ VSW++++AGC + +L F++ M + +
Sbjct: 225 YAKGKRFVESLRVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 282
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
S+L S L G +H+H + F D V + MY+KC ++ A++LFD
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 342
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ R S+ AMI+GY+Q+ +AL LF + ++G D +++ + C L G
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
A L +V V NA IDMY KC ++ +A +F + + VSW +IA NG
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPE 483
+ E L LF ++ + P+ TF ++L+ACT G L G I SI++ G++ N
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK---SGMASNSS 518
Query: 484 LDHYSCMADLLGRKGKLKEA 503
+ + D+ + G ++EA
Sbjct: 519 VG--CSLIDMYSKCGMIEEA 536
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 239/545 (43%), Gaps = 47/545 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + E+ K++ +F M + IE + TF I K C+ L D IHG +V
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K R + ++F + ++ SW+A++ G Q L L+
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M+ V + ++ L L +H+ + AD V + YA
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KCD+++ A+++F E R S+N+M+ G + + +L + +M +G D ++
Sbjct: 328 KCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ + + L +G ++ I LDV V N I MY KC + A +FD +
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ + Q G E L LF +M + PD T S++ C G+L G
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEI 504
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL---FYALP----------------- 407
+ G+ N V +LIDMYSKCG I +A ++ F+
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+++ VSW ++I+G + + +A LF ++ME+ + P++ T+ VL C + G
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Query: 468 ISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLC 524
I + I + D Y C + D+ + G L ++ L F +S+ + D W ++C
Sbjct: 625 IHA-----QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL--RRDFVTWNAMIC 677
Query: 525 ACKIH 529
H
Sbjct: 678 GYAHH 682
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 44/269 (16%)
Query: 237 YNGFRLDVTTVVSLLSSFVCPE-----ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ F V +V + SFV E AL G+ H+H I GF V+N L+ +Y+
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
D SA ++FD + R VSW MI+GY++ D+ +A F M + D+V+ SM
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMM----PVRDVVSWNSM 151
Query: 352 ISGCGQSG----ALEL-------GKWFDNYA-------CS-----------------GGL 376
+SG Q+G ++E+ G FD CS G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+V+ +AL+DMY+K ++ +F +PEK VSW+ +IAGC N AL F +
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ +++ ++ + +VL++C L G
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLG 300
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNAL---------------------------- 386
C + GALELGK + G + V N L
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 387 ---IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
I+ YSK + A F +P + VVSW +M++G NGE ++++++F + +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
+ TF +L+ C+ FLE I + + ++ S + D+ + + E+
Sbjct: 178 FDGRTFAIILKVCS---FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
L Q +P K+ W ++ C
Sbjct: 235 LRVFQGIPEKNSVS-WSAIIAGC 256
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 299/582 (51%), Gaps = 53/582 (9%)
Query: 60 IAKACAKLSDL--IYSQMIHGHIVKSPFV-----------KCDRLDCAYKIFDEMAVRDV 106
I + C L L I +QM+ ++++ F + LD +I + +V
Sbjct: 63 ILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNV 122
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
SWNA + G+ + G +E L+ M L G ++ D T L + L V
Sbjct: 123 FSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLG 182
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ G + D+ V N I+ C +L +A VF + R+R +V+WNSM+ GC
Sbjct: 183 HVLKFGFECDIFVHNASITMLLSCGELSVAYDVFN--KSRVRDLVTWNSMITGCVKRGLA 240
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
+++ Y+ M R + T++ ++SS + L G+ H + +G + + + N L
Sbjct: 241 IEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNAL 300
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD------------------ 327
+ MY KCG++ +ARVLFD + +T VSWT M+ GYA+ G LD
Sbjct: 301 MDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWN 360
Query: 328 -------------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
EAL LF M+ PD VT+++ +S C Q GAL++G W +Y
Sbjct: 361 AIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERH 420
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
L +V + AL+DMY+KCG+I A ++F +P++ ++WT +I G AL+G +AL F
Sbjct: 421 KLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYF 480
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMAD 492
+++ + + P+ +TFL VL AC H G +E+G + + +N P+L HYSCM D
Sbjct: 481 SKMIHIGIVPDEITFLGVLSACCHGGLVEEGRK----YFSEMSSKFNVSPKLKHYSCMVD 536
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
LLGR G L+EA + V++MP+ +DA + G L AC+++ N++IGE A+ L +++P +
Sbjct: 537 LLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGN 596
Query: 553 YVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
YV +A+ Y+ W + R +M V+K PG SL ING
Sbjct: 597 YVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEING 638
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 204/442 (46%), Gaps = 47/442 (10%)
Query: 13 IYRSSTIN--QWNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSD 69
+YR +N WN+ IR V + +L+++M ++P+N T+P + K C
Sbjct: 114 LYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYS 173
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ GH++K F + C L AY +F++ VRD+ +WN+M+ G
Sbjct: 174 SCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITG 233
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ G ++++ M ++ + +T++G+ + + L+L K H + G++
Sbjct: 234 CVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFT 293
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERL----------------------------- 206
+ + N + Y KC +L A ++F + ++
Sbjct: 294 IPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPE 353
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++VV WN++++GC + ++L + M D T+V+ LS+ AL G +
Sbjct: 354 KSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWI 413
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + + +DV++ L+ MY+KCG+I A +F+ I R ++WTA+I G A G+
Sbjct: 414 HHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNA 473
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNA 385
+AL F M G +PD +T L ++S C G +E G K+F + + + +
Sbjct: 474 QDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSC 533
Query: 386 LIDMYSKCGSIGDARELFYALP 407
++D+ + G + +A EL +P
Sbjct: 534 MVDLLGRAGHLEEAEELVKNMP 555
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 256/490 (52%), Gaps = 45/490 (9%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD-------LKMAELVFCGIEERLRTV 209
L+ LK +H++ I + DV + I A C D + A +F I+ +
Sbjct: 30 LTHLKIIHAYMIRTHIICDVFAASRLI---AFCVDPSSGTSLIDYASRIFSQIQNP--NL 84
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+N+M+ G + D + +FY G D T L+ S + G H H
Sbjct: 85 FIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGH 144
Query: 270 GIHYGFDLDVSVINTLISMYS-------------------------------KCGDIDSA 298
I +GF+ DV V N+L+ MY+ KCGD++SA
Sbjct: 145 IIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESA 204
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R LFD + ++ V+W+ MISGYAQ D+A+ LF +++ G + ++S+IS C
Sbjct: 205 RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL 264
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GALELG+ +Y G+ N+++ AL+DMY++CGSI A +F LPE+ +SWT +I
Sbjct: 265 GALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALI 324
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
AG A++G +L F ++E L P +TF AVL AC+H G +E+G+ I D +
Sbjct: 325 AGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRV 384
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
P L+HY CM DLLGR GKL+EA FV MP+K +A +WG LL AC+IH N EIGE V
Sbjct: 385 --EPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERV 442
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
L +L P + YV ++N YA W+ V +R MMK +KK PG SL ++G+
Sbjct: 443 GKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHK 502
Query: 599 FTAEDRYHAE 608
FT D H E
Sbjct: 503 FTIGDSSHPE 512
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 182/412 (44%), Gaps = 46/412 (11%)
Query: 59 FIAKACAKLSDL--IYSQMIHGHIV-------------KSPFVKCDRLDCAYKIFDEMAV 103
F + C+ L+ L I++ MI HI+ P +D A +IF ++
Sbjct: 22 FSLETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQN 81
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
++ +NAM+ G + + + + G+ D +T L ++ +S+
Sbjct: 82 PNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQA 141
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--------------------CGIE 203
H I G + DV V N+ + YA D + A L+F CG
Sbjct: 142 HGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDV 201
Query: 204 ERLR---------TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
E R +V+W++M++G + FD ++ ++ + G R + T +VS++SS
Sbjct: 202 ESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSC 261
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
AL G H + + G L++ + L+ MY++CG ID A +F+ + +R +SWT
Sbjct: 262 AHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWT 321
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACS 373
A+I+G A G + +L+ F M AG P +T +++S C G +E G + F++
Sbjct: 322 ALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRD 381
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN 424
++ + ++D+ + G + +A +P K W ++ C ++
Sbjct: 382 HRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIH 433
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 129/313 (41%), Gaps = 57/313 (18%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ IR + + Q ++ + P+NLTFPF+ K+C KL + HGHI+
Sbjct: 87 FNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHII 146
Query: 82 KSPFVK---------------------------------------------CDRLDCAYK 96
K F K C ++ A K
Sbjct: 147 KHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARK 206
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD+M +++ +W+ M+ G+AQ + + LF ++ G++A+ ++ + + H
Sbjct: 207 LFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGA 266
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L + H + + G+ ++ + + YA+C + A VF + E R +SW +++
Sbjct: 267 LELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPE--RDTLSWTALI 324
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS----------FVCPEALVQGRLV 266
AG + SL ++ M+ G T ++LS+ F E++ + V
Sbjct: 325 AGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRV 384
Query: 267 HSHGIHYGFDLDV 279
HYG +D+
Sbjct: 385 EPRLEHYGCMVDL 397
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 130/315 (41%), Gaps = 40/315 (12%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM----YSKCGDIDSARVLFDGI 305
L S C + L +++H++ I DV + LI+ S ID A +F I
Sbjct: 21 LFSLETCSD-LTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQI 79
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ + AMI G++ + D+A + + G LPD +T ++ C + + +G
Sbjct: 80 QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGS 139
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT--------- 416
+ G + +V V N+L+ MY+ G A +F + VVSWT+
Sbjct: 140 QAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCG 199
Query: 417 ----------------------MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
MI+G A N F +A++LF L +R N ++V+
Sbjct: 200 DVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVIS 259
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
+C H G LE G + G++ N L + + D+ R G + +A+ + +P +
Sbjct: 260 SCAHLGALELGERAHDYVVKN-GMTLNLILG--TALVDMYARCGSIDKAVWVFEDLP-ER 315
Query: 515 DAGIWGTLLCACKIH 529
D W L+ +H
Sbjct: 316 DTLSWTALIAGLAMH 330
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 313/621 (50%), Gaps = 19/621 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ + + WNS I + + L LFR+M++ + N T +AC S
Sbjct: 68 FDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSF 127
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
IH I+KS V+ ++ A +IFDE+ +D +WN+M+ G
Sbjct: 128 KKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAG 187
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F Q G L+ F ++ ++ D V+++ + A+ +L K +H++ + +D++
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ + NT I Y+KC + A LVF + + ++SW +++A + ++L R +
Sbjct: 248 LRIGNTLIDMYSKCCCVAYAGLVFDKMINK--DLISWTTVIAAYAQNNCHTEALKLLRKV 305
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G +D + S L + L + VH + + G D+ + N +I +Y+ CG+I
Sbjct: 306 QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNI 364
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ A +F+ I + VSWT+MIS Y G +EAL +F+ M+ PD +T++S++S
Sbjct: 365 NYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAA 424
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL GK + G N+L+DMY+ CGS+ +A ++F K +V WT
Sbjct: 425 ASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWT 484
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
TMI ++G A++LF + + L P+ +TFLA+L AC+H+G + +G +++
Sbjct: 485 TMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEG--KRLLETMK 542
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
P +HY+C+ DLLGR L+EA FV+SM I+ A +W L AC+IH N ++G
Sbjct: 543 CKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLG 602
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E A L L+P S YV ++N +A GRW V +R MK +KK PG S + K
Sbjct: 603 EIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNK 662
Query: 596 TCTFTAEDRYHAESELTYPVL 616
TF D+ H ES Y L
Sbjct: 663 VHTFLVRDKSHPESYKIYQKL 683
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 231/460 (50%), Gaps = 22/460 (4%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIF 98
++ TFP + KAC + D+ IHG I+K S + KC+ + A K+F
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68
Query: 99 DEMAVR-DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
D M R DV SWN+++ ++ G L LF M+ G+ A+ T++ QA +
Sbjct: 69 DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFK 128
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
L +H+ + DV V N ++ + + + A +F ++E + ++WNSM+A
Sbjct: 129 KLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDE--KDNITWNSMIA 186
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G T ++++L F+ + + D +++S+L++ L+ G+ +H++ + D
Sbjct: 187 GFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDS 246
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
++ + NTLI MYSKC + A ++FD + ++ +SWT +I+ YAQ EAL+L ++
Sbjct: 247 NLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQ 306
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G D + + S + C L K Y GL D +M+ N +ID+Y+ CG+I
Sbjct: 307 TKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSD-LMMQNMIIDVYADCGNIN 365
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A +F ++ K VVSWT+MI+ NG EAL +F+ + E + P+ +T +++L A
Sbjct: 366 YATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAA 425
Query: 458 HTGFLEKGWAISIIQYDD----KGISYNPELDHYSCMADL 493
L KG I + +G + N +D Y+C L
Sbjct: 426 SLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSL 465
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 174/328 (53%), Gaps = 5/328 (1%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
MR++G+ D T + +A + + +H I G D+ V V N+ +S YAKC+D
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+ A +F + ER VVSWNS+++ + + ++L +R M G + T+V+ L
Sbjct: 61 ILGARKLFDRMNER-NDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAAL 119
Query: 252 SSFVCPEALVQ--GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
+ C ++ + G +H+ + LDV V N L++M+ + G + A +FD + ++
Sbjct: 120 QA--CEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKD 177
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
++W +MI+G+ Q G +EAL+ F ++ A PD V+++S+++ G+ G L GK
Sbjct: 178 NITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHA 237
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
YA L N+ + N LIDMYSKC + A +F + K ++SWTT+IA A N E
Sbjct: 238 YAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTE 297
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACT 457
AL L ++ + + + + L AC+
Sbjct: 298 ALKLLRKVQTKGMDVDTMMIGSTLLACS 325
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 120/231 (51%), Gaps = 1/231 (0%)
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G D T +L + E + +G +H I G+D V V N+L+SMY+KC DI A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 299 RVLFDGICDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
R LFD + +R VSW ++IS Y+ G EAL LF M+ AG + T+++ + C
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
S +LG +V V NAL+ M+ + G + A +F L EK ++W +M
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
IAG NG + EAL F L + +L+P+ V+ +++L A G+L G I
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEI 235
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+ + + W S I V+ A++ L +F MK+ +EP+++T I A A LS
Sbjct: 369 RMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLS 428
Query: 69 DLIYSQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLV 114
L + IHG I + F+ C L+ AYK+F + + W M+
Sbjct: 429 ALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMIN 488
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ G + + LF M + D +T + L A H+
Sbjct: 489 AYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHS 528
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 295/599 (49%), Gaps = 49/599 (8%)
Query: 71 IYSQMIHGHIVKSPFV-----------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
I +QMI ++ PF + LD + KI + ++ SWN + GF++
Sbjct: 72 IQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSES 131
Query: 120 GFLENVLRLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
+ L+ M G + D T L + + SL + + + ++
Sbjct: 132 ENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVS 191
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
V N I +A C D++ A VF E +R +VSWN ++ G + + ++ Y+ M
Sbjct: 192 HVHNASIHMFASCGDMENARKVF--DESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME 249
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
G + D T++ L+SS L +G+ + + G + + ++N L+ M+SKCGDI
Sbjct: 250 SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIH 309
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLD----------------------------- 327
AR +FD + RT VSWT MISGYA+ G LD
Sbjct: 310 EARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKR 369
Query: 328 --EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+AL LF M+ + PD +T++ +S C Q GAL++G W Y L NV + +
Sbjct: 370 GQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTS 429
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY+KCG+I +A +F+ + + +++T +I G AL+G+ A+ F+++++ + P+
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TF+ +L AC H G ++ G + NP+L HYS M DLLGR G L+EA
Sbjct: 490 EITFIGLLSACCHGGMIQTGR--DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADR 547
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
++SMP+++DA +WG LL C++H N+E+GE A L +L+P + YV + Y
Sbjct: 548 LMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANM 607
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
W+ R MM V+K PG S +NG C F D+ ESE Y L CL H R
Sbjct: 608 WEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 312/622 (50%), Gaps = 22/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I +V+ K+L F QM+ + + +T + C +L + + +HG +V
Sbjct: 229 WNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVV 288
Query: 82 KSPFVK----CDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS C+ L Y +F +M RD+ SWN+M+ G L
Sbjct: 289 KSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALE 348
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M ++VT T A +L LK VH+F I +G+ ++ + N ++ Y
Sbjct: 349 LLIEMLQTRKATNYVT---FTTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYG 405
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + A+ V C I R V+WN+++ G + + ++ + + G ++ T+
Sbjct: 406 KFGSMAAAQRV-CKIMPD-RDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITI 463
Query: 248 VSLLSSFVCPEALV-QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V+LLS+F+ P+ L+ G +H+H + GF+L+ V ++LI+MY++CGD++++ +FD +
Sbjct: 464 VNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLA 523
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ +W A++S A G +EAL+L M G D + + G L+ G+
Sbjct: 524 NKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQ 583
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G + N V NA +DMY KCG I D + + SW +I+ A +G
Sbjct: 584 LHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGF 643
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
F +A + FH++++L LRP+ VTF+++L AC+H G +++G A G+ ++H
Sbjct: 644 FQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTG--IEH 701
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
C+ DLLGR GKL EA +F+ MP+ +W +LL ACKIH N+E+ A LF+L+
Sbjct: 702 CVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELD 761
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
+ YV +N A RW V N+R M+ + +KK P S + + TF D+YH
Sbjct: 762 SSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYH 821
Query: 607 AESELTYPVLDCLALHSREEAY 628
++ Y L+ L RE Y
Sbjct: 822 PQNAEIYAKLEELKKIIREAGY 843
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 211/440 (47%), Gaps = 10/440 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K ++ A +FD+M R+ ASWN ++ GF ++G+ + ++ F +M G++
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 145 MGLTQAAIHAKHLSLLK-SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
L A + ++ VH+ I G+ DV V + + Y + ++VF IE
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
E +VSW S++ G Y + ++ YR + +G + + +++ S + G
Sbjct: 122 EP--NIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
V I G D VSV N+LISM+ C I+ A +FD + +R +SW ++I+
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G +++L F M D +T+ +++ CG + L G+ GL+ NV VC
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
N+L+ MYS+ G DA +F+ + E+ ++SW +M+A NG + AL+L ++++
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
N VTF L AC + L+ A I+ G+ +N + + + + G+ G + A
Sbjct: 360 TNYVTFTTALSACYNLETLKIVHAFVILL----GLHHNLIIG--NALVTMYGKFGSMAAA 413
Query: 504 LDFVQSMPIKSDAGIWGTLL 523
+ MP + D W L+
Sbjct: 414 QRVCKIMPDR-DEVTWNALI 432
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 232/511 (45%), Gaps = 30/511 (5%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+ + ++R+++++ + N + ++C L D + + G ++KS
Sbjct: 143 EVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLI 202
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
F CD ++ A +FD+M RD SWN+++ G E L F MR + D++
Sbjct: 203 SMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYI 262
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ L A++L + +H + G++++V VCN+ +S Y++ + AE VF +
Sbjct: 263 TISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKM 322
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R ++SWNSM+A + +L M+ + T + LS+ E L
Sbjct: 323 RE--RDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL-- 378
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
++VH+ I G ++ + N L++MY K G + +A+ + + DR V+W A+I G+A
Sbjct: 379 -KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHAD 437
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISG-CGQSGALELGKWFDNYACSGGLKDNVM 381
+ + A+ F + G + +T+++++S L+ G + G +
Sbjct: 438 NKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETF 497
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V ++LI MY++CG + + +F L K +W +++ A G EAL L ++
Sbjct: 498 VQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDG 557
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELDHYSCMA--DLLGRKG 498
+ ++ +F + L++G + S+I I + E + Y A D+ G+ G
Sbjct: 558 IHLDQFSFSVAHAIIGNLTLLDEGQQLHSLI------IKHGFESNDYVLNATMDMYGKCG 611
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ + + P W L+ A H
Sbjct: 612 EIDDVFRIL-PQPRSRSQRSWNILISALARH 641
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 197/441 (44%), Gaps = 16/441 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL---- 70
R + WNS + V+ + L L +M Q N +TF AC L L
Sbjct: 323 RERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVH 382
Query: 71 -------IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
++ +I G+ + + + K + A ++ M RD +WNA++ G A
Sbjct: 383 AFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPN 442
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTW 182
+ F +R G+ +++T++ L A + L +H+ + G + + V ++
Sbjct: 443 AAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSL 502
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I+ YA+C DL + +F + + + +WN++++ + +++L M +G L
Sbjct: 503 ITMYAQCGDLNTSNYIFDVLANKNSS--TWNAILSANAHYGPGEEALKLIIKMRNDGIHL 560
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + + L +G+ +HS I +GF+ + V+N + MY KCG+ID +
Sbjct: 561 DQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRIL 620
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
R++ SW +IS A+ G +A F M G PD VT +S++S C G ++
Sbjct: 621 PQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVD 680
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAG 420
G +F + + G+ + C +ID+ + G + +A +P + W +++A
Sbjct: 681 EGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAA 740
Query: 421 CALNGEFVEALDLFHQLMELD 441
C ++G A +L ELD
Sbjct: 741 CKIHGNLELARKAADRLFELD 761
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSK G I+ A+ +FD + +R SW ++SG+ + G +A++ F M G P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 348 VLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
S+++ C +SG + G + + GL +V V +L+ Y G + + +F +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
E +VSWT+++ G A NG E + ++ +L + N V+++C
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSC 170
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MYSK GSI A+ +F +PE+ SW +++G G + +A+ F ++E +RP+
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 449 FLAVLQACTHTGFLEKG 465
+++ AC +G + +G
Sbjct: 61 AASLVTACDRSGCMTEG 77
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/638 (31%), Positives = 319/638 (50%), Gaps = 29/638 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + ++ +TL +M+Q+ + P+ +TF +C L IH +V
Sbjct: 26 WTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVV 85
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMA-VRDVASWNAMLVGFAQMGFLENVL 126
S + KC L A ++F +M R+V SW+ M A G + L
Sbjct: 86 DSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEAL 145
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
R F M L+GI+A ++ + A + + +HS G ++++ V N ++ Y
Sbjct: 146 RHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMY 205
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C ++ A VF ++E LR VVSWN M++ + D+ D++ Y+ M R D T
Sbjct: 206 GRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---LRPDKVT 262
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
VSLLS+ E + GR++H ++ + +V V N L+SMY+KCG AR +FD +
Sbjct: 263 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 322
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAM---EAAGE----LPDLVTVLSMISGCGQSG 359
R+ +SWT +IS Y ++ + EA LF M E G PD + +++++ C
Sbjct: 323 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVS 382
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMI 418
ALE GK A S GL + V A++++Y KCG I +AR +F A+ + V W MI
Sbjct: 383 ALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMI 442
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYDDKG 477
A A G+ EAL LF ++ +RP+ +F+++L AC+HTG ++G + + + + +
Sbjct: 443 AVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRN 502
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
++ + H+ C+ADLLGR G+LKEA +F++ +P+K DA W +LL AC+ H +++ +
Sbjct: 503 VTRT--IQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKE 560
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA L +LEP A YV ++N YA +W VA +R M VKK G S I
Sbjct: 561 VANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMH 620
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
F D H + L L +E Y K +
Sbjct: 621 DFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMV 658
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 228/448 (50%), Gaps = 16/448 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ CD A FD + R++ SW ++ FA G + LR MR G++ D VT
Sbjct: 2 YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + + L +H + ++ D V N ++ Y KC L A+ VF + E
Sbjct: 62 ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM-E 120
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R R V+SW+ M ++L +R M+ G + + +V++LS+ P + GR
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR--VSWTAMISGYAQ 322
++HS GF+ ++ V N +++MY +CG ++ AR +FD + + R VSW M+S Y
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+A++L+ M+ PD VT +S++S C + + LG+ + L+ NV+V
Sbjct: 241 NDRGKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD- 441
NAL+ MY+KCGS +AR +F + ++ ++SWTT+I+ EA LF Q++EL+
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 357
Query: 442 ------LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
++P+ + F+ +L AC LE+G +S Q G+S + + + + +L G
Sbjct: 358 NGSSQRVKPDALAFVTILNACADVSALEQGKMVS-EQAASCGLSSDKAVG--TAVVNLYG 414
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ G+++EA ++ + D +W ++
Sbjct: 415 KCGEIEEARRIFDAVCSRPDVQLWNAMI 442
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY+ C A+ FD + R SWT +++ +A G E LR M G PD VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
++ + CG +L G L+ + V NAL++MY KCGS+ A+ +F +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 408 E-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
+ V+SW+ M AL+G EAL F ++ L ++ + + +L AC+ ++ G
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 467 AI-SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
I S I + EL + + + GR G ++EA +M
Sbjct: 181 MIHSCIALS----GFESELLVANAVMTMYGRCGAVEEARKVFDAM 221
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/621 (29%), Positives = 311/621 (50%), Gaps = 25/621 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WN+ + V + +T+ +F+ M++ D+E ++ TF + AC L L + +H
Sbjct: 392 NIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVH 451
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+K+ + K +D A +F + +D SWNA++VG A E
Sbjct: 452 CITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEE 511
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ + M+ GI D V+ A + + K +H I V ++ +V ++ I
Sbjct: 512 EAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLI 571
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+K D++ + V ++ ++V N+++ G ++ D+++ ++ ++ +GF+
Sbjct: 572 DLYSKFGDVESSRKVLAHVDAS--SMVPINALITGLVQNNREDEAIELFQQVLKDGFKPS 629
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLF 302
T S+LS P + V G+ VHS+ + + D S+ +L+ +Y KC ++ A L
Sbjct: 630 NFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLL 689
Query: 303 DGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
+ D + V WTA ISGYAQ G D++L +F+ M + D T S++ C + AL
Sbjct: 690 AEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAAL 749
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAG 420
GK G +AL+DMYSKCG + + E+F L K ++ W +MI G
Sbjct: 750 TDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVG 809
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A NG EAL LF ++ E L+P+ VT L VL AC+H G + +G + +D Y
Sbjct: 810 FAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNL----FDSMSQVY 865
Query: 481 N--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
P +DHY+C+ DLLGR G L+EA + + +P ++D IW T L AC++H + E G+
Sbjct: 866 GIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVA 925
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L ++EP ++ YV +++ +A G W R M+ V KFPG S + KT
Sbjct: 926 AKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNL 985
Query: 599 FTAEDRYHAESELTYPVLDCL 619
F +D +H ++ Y +LD L
Sbjct: 986 FVVQDTHHPDTLGIYKMLDDL 1006
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 200/436 (45%), Gaps = 23/436 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I + L LF +M++ P+ +T+ I A +
Sbjct: 229 WASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMG------------- 275
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
RL A + + + +WNA++ ++Q G V L+ +M+ G+
Sbjct: 276 --------RLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTR 327
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T + AA + +H+ + G+DA+V V ++ I+ Y K + A+ VF
Sbjct: 328 STFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 387
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
E+ +V WN+M+ G D ++++ +++M D T VS+L + + ++L
Sbjct: 388 STEK--NIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLD 445
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
GR VH I D D+ V N ++ MYSK G ID A+ LF I + VSW A+I G A
Sbjct: 446 IGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLA 505
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ +EA+ + M+ G PD V+ + I+ C A E GK + + N
Sbjct: 506 HNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHA 565
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V ++LID+YSK G + +R++ + +V +I G N EA++LF Q+++
Sbjct: 566 VGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDG 625
Query: 442 LRPNRVTFLAVLQACT 457
+P+ TF ++L CT
Sbjct: 626 FKPSNFTFASILSGCT 641
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 207/468 (44%), Gaps = 58/468 (12%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKI 97
P+ + AC++L L + +H ++KS F KC + A ++
Sbjct: 158 PDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRV 217
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
FD +A D W +M+ G+ ++G + L LF M +G D VT +
Sbjct: 218 FDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYV------------ 265
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
T IS+ A L A + I+ + + V+WN++++
Sbjct: 266 -----------------------TIISTLASMGRLSDARTLLKRIQ--MPSTVAWNAVIS 300
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
+ + Y+ M G +T S+LS+ A +G+ +H+ + +G D
Sbjct: 301 SYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDA 360
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+V V ++LI++Y K G I A+ +FD ++ V W AM+ G+ Q +E +++F M
Sbjct: 361 NVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMR 420
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
A D T +S++ C +L++G+ + ++ V NA++DMYSK G+I
Sbjct: 421 RADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAID 480
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A+ LF +P K VSW +I G A N E EA+ + ++ + P+ V+F + AC+
Sbjct: 481 VAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACS 540
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEA 503
+ E G I I YN +H S + DL + G ++ +
Sbjct: 541 NIRATETGKQIHC-----ASIKYNVCSNHAVGSSLIDLYSKFGDVESS 583
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 10/214 (4%)
Query: 257 PEALVQGR---LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDGICDRTRVS 312
P Q R ++H+ + G L + + L+ +Y + G + A R L G C S
Sbjct: 66 PHRTHQARACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRAL--GCCTGAPAS 123
Query: 313 WTA---MISGYAQKGDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKWFD 368
A ++S +A+ G + L F + + G PD + ++S C + GALE G+
Sbjct: 124 GAAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVH 183
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
G + L+DMY+KC + DAR +F + + W +MIAG G +
Sbjct: 184 CDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQ 243
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
+AL LF ++ ++ P++VT++ ++ G L
Sbjct: 244 QALALFSRMEKMGSAPDQVTYVTIISTLASMGRL 277
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/611 (30%), Positives = 315/611 (51%), Gaps = 21/611 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+S + V +A + L +F QM +EP+++T + +AC++L L + +HG++V
Sbjct: 169 WSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVV 228
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K L A ++F+ + R A W M+ + Q G + L
Sbjct: 229 RREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALN 288
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS-Y 186
+F M+ ++ + VT++G+ A + +SVH F I +D ++ + Y
Sbjct: 289 VFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 348
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A +L+ VF I+E+ T++SWN++++ T + +++L + M G D +
Sbjct: 349 ADTGNLRDCHKVFETIKEK--TILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 406
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S LS+ G +H + I G + + V N LI MY+KCG + SA +F+ I
Sbjct: 407 LASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIK 465
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+++ V+W +MI G++Q G EA+ LF M D +T LS+I C G LE GKW
Sbjct: 466 EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKW 525
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ GL+ + + AL DMYSKCG + A +F + E+ +VSW+ MIAG ++G+
Sbjct: 526 VHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQ 585
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+ LF+Q++ ++PN +TF+ +L AC+H G +E+G + + G+ P+ DH
Sbjct: 586 INATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG-KLYFNSMSEFGV--EPKHDH 642
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
++CM DLL R G L A + S+P +++ IWG LL C+IH I+I + + L ++
Sbjct: 643 FACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVD 702
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
Y ++N YA G WD +R+MMK ++K PG S I+ K F D H
Sbjct: 703 TADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSH 762
Query: 607 AESELTYPVLD 617
++++ Y L+
Sbjct: 763 SQTKDIYRFLE 773
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 258/531 (48%), Gaps = 40/531 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W EAV+ L + Q+ + +N FP + KAC+ DL +HG ++
Sbjct: 76 WGGFFEEAVS--------LYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVI 127
Query: 82 KSPF----------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K F + C LD A K FD M +RDV +W+++++ F Q G
Sbjct: 128 KCGFESDAVVETSLLCMYGEMSC--LDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEG 185
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L +F M ++ D VT++ +T+A L L +SVH + + ++++ S+ N+ I
Sbjct: 186 LDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVM 245
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y K DL AE +F + R+ W M++ F ++LN + M +
Sbjct: 246 YGKLGDLYSAERLFENVPCRM--TAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQV 303
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFDG 304
T+V +L + + +GR VH I D ++ + L+ +Y+ G++ +F+
Sbjct: 304 TMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFET 363
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I ++T +SW +IS + + G +EAL LF M+ G +PD ++ S +S CG +LG
Sbjct: 364 IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 423
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
Y G N V NALIDMY+KCG + A ++F + EK +V+W +MI G + N
Sbjct: 424 AQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQN 482
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPE 483
G VEA+ LF Q+ ++ +++TFL+V+QAC+H G+LEKG W K I Y
Sbjct: 483 GYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWV------HHKLIMYGLR 536
Query: 484 LDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
D Y + + D+ + G+L+ A M +S W ++ +H I
Sbjct: 537 KDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVS-WSVMIAGYGMHGQI 586
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 177/378 (46%), Gaps = 28/378 (7%)
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ L +H+ G+ I SYA+ + ++ VF + W ++
Sbjct: 15 TTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKP--DSFMWGVLIK 72
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ---------GRLVHS 268
+G F+++++ Y M+Y D T + S+FV P L G VH
Sbjct: 73 CYVWGGFFEEAVSLYHEMVYQ----DQTQI----SNFVFPSVLKACSGFGDLSVGGKVHG 124
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
I GF+ D V +L+ MY + +D A FD + R V+W++++ + Q G E
Sbjct: 125 RVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASE 184
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
L +F M + PD VT+LS+ C + G+L LG+ Y ++ N + N+LI
Sbjct: 185 GLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIV 244
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY K G + A LF +P ++ WT MI+ +G F EAL++F ++ E + PN+VT
Sbjct: 245 MYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVT 304
Query: 449 FLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYS-CMADLLGRKGKLKEALD 505
+ VL AC G +++G ++ +I+ + +PELD + +L G L++
Sbjct: 305 MVGVLCACARLGRVKEGRSVHGFVIRR-----AMDPELDFLGPALMELYADTGNLRDCHK 359
Query: 506 FVQSMPIKSDAGIWGTLL 523
+++ K+ W TL+
Sbjct: 360 VFETIKEKTILS-WNTLI 376
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 201/439 (45%), Gaps = 13/439 (2%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQ 149
+ + ++FD D W ++ + GF E + L++ M Q + +
Sbjct: 49 FESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLK 108
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A LS+ VH I G ++D V + + Y + L A F + +R V
Sbjct: 109 ACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMP--IRDV 166
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVH 267
V+W+S+V + + L+ + M+ D T++S+ + C E +L GR VH
Sbjct: 167 VAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEA--CSELGSLRLGRSVH 224
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ + + + S+ N+LI MY K GD+ SA LF+ + R WT MIS Y Q G
Sbjct: 225 GYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQ 284
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV-MVCNAL 386
EAL +F M+ P+ VT++ ++ C + G ++ G+ + + + + AL
Sbjct: 285 EALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPAL 344
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+++Y+ G++ D ++F + EK ++SW T+I+ NG+ EAL LF Q+ L P+
Sbjct: 345 MELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDS 404
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+ + L AC F + G I Y K ++N + + + D+ + G + A
Sbjct: 405 YSLASSLSACGTISFSQLGAQIH--GYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKM 460
Query: 507 VQSMPIKSDAGIWGTLLCA 525
+ + KS W +++C
Sbjct: 461 FEKIKEKSLV-TWNSMICG 478
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ TI WN+ I + + LLLF QM+ + P++ + AC +S
Sbjct: 365 KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGA 424
Query: 75 MIHGHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IHG+I+K+ + KC + A K+F+++ + + +WN+M+ GF+Q G+
Sbjct: 425 QIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGY 484
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ LF M + ++ D +T + + QA H +L K VH I G+ D +
Sbjct: 485 SVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTA 544
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
Y+KC +L+MA VF + E R++VSW+ M+AG + + +++ + M+ +G +
Sbjct: 545 LTDMYSKCGELQMAHGVFDRMSE--RSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIK 602
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T + +LS+ A+ +G+L + +G + ++ + S+ GD++ A +
Sbjct: 603 PNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQI 662
Query: 302 FDGICDRTRVS-WTAMISG 319
+ S W A+++G
Sbjct: 663 ITSLPFPANSSIWGALLNG 681
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/620 (29%), Positives = 310/620 (50%), Gaps = 23/620 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + +L LF M ++++ P+ I AC+ L L + IH +++
Sbjct: 211 WTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVL 270
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + KC R+ +FD + V+++ SW M+ G+ Q + +
Sbjct: 271 RSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVE 330
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M +G + D + + L + +HS+ I + ++ D V N I Y+
Sbjct: 331 LVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYS 390
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC+ L A+ VF + +VV +N+M+ G + +L ++ M T
Sbjct: 391 KCNALDDAKRVFDVVT--CHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTF 448
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VSLL L + +H I YGF LD + LI +YSKC I AR +F+G +
Sbjct: 449 VSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTN 508
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ V W ++ SGY + +EA +L+ ++ + E P+ T ++ + +L G+ F
Sbjct: 509 KDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQF 568
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
N GL+ + + NAL+DMY+KCGS+ +A ++F + K W +MI+ A +G+
Sbjct: 569 HNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKV 628
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPELD 485
EAL +F ++ ++ PN VTF++VL AC+H GF+E G +Q+ + Y P ++
Sbjct: 629 EEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDG-----LQHYNSMARYGIEPGIE 683
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+ + LLGR G+L EA +F++ M I+ A +W +LL AC++ N+E+ ++ A +
Sbjct: 684 HYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISI 743
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + YV ++N +A G W V +R M N V K PGQS +NG+ F + D+
Sbjct: 744 DPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKV 803
Query: 606 HAESELTYPVLDCLALHSRE 625
H E++L Y LD L ++
Sbjct: 804 HDETDLIYLALDELTTQMKD 823
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 236/529 (44%), Gaps = 25/529 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W+S + K LL F + ++ ++ N I +AC + +H ++
Sbjct: 109 WSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYV 168
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+KS F K +D A +FD + ++ +W A++ G+ + G E L
Sbjct: 169 IKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSL 228
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+LF M + D + + A +L K +H++ + DVS N I Y
Sbjct: 229 QLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFY 288
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC +K + +F ++ ++ ++SW +M+AG +++ M G++ D
Sbjct: 289 TKCGRVKAGKALFDRLD--VKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYA 346
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+L+S +AL GR +HS+ I + D V N LI MYSKC +D A+ +FD +
Sbjct: 347 CSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVT 406
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ V + AMI GY+++G L AL +F M P +T +S++ L+L K
Sbjct: 407 CHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQ 466
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G + +ALID+YSKC I DAR +F K +V W ++ +G L +
Sbjct: 467 IHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLK 526
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EA L+ L RPN TF A+ A + L G Q+ ++ + E D
Sbjct: 527 SEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQ-----QFHNQVMKMGLESDP 581
Query: 487 Y--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ + + D+ + G ++EA + + S + D W +++ H +E
Sbjct: 582 FITNALVDMYAKCGSVEEA-EKIFSSSVWKDTACWNSMISMYAQHGKVE 629
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 214/443 (48%), Gaps = 11/443 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI-QADFVTVMGLTQAAI 152
A +FD+M R++ SW++++ + Q+G+ E L F + + + + + + +A +
Sbjct: 94 AGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACV 153
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
VHS+ I G DV V + + YAK ++ A LVF G+ L+T V+W
Sbjct: 154 QRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGL--VLKTPVTW 211
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
+++ G T + + SL + MM + D + S+L++ L G+ +H++ +
Sbjct: 212 TAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLR 271
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
+DVS N LI Y+KCG + + + LFD + + +SWT MI+GY Q EA+ L
Sbjct: 272 SETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVEL 331
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
M G PD S+++ CG AL+ G+ +Y L+ + V NALIDMYSK
Sbjct: 332 VGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSK 391
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
C ++ DA+ +F + VV + MI G + G AL++F ++ + P+ +TF+++
Sbjct: 392 CNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSL 451
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSM 510
L L+ I + I Y LD + S + D+ + +++A +V
Sbjct: 452 LGLSAALLCLQLSKQIHGLI-----IKYGFSLDKFTSSALIDVYSKCSCIRDA-RYVFEG 505
Query: 511 PIKSDAGIWGTLLCACKIHLNIE 533
D +W +L + L E
Sbjct: 506 TTNKDIVVWNSLFSGYNLQLKSE 528
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 196/424 (46%), Gaps = 21/424 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W + I + + + + L +M + +P+ + +C + L + + IH
Sbjct: 309 IISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHS 368
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+++K + KC+ LD A ++FD + V +NAM+ G+++ G+L
Sbjct: 369 YVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCG 428
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L +F MRL + F+T + L + L L K +H I G D + I
Sbjct: 429 ALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALID 488
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+KC ++ A VF G + +V WNS+ +G K +++ Y + + R +
Sbjct: 489 VYSKCSCIRDARYVFEGTTN--KDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNE 546
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T +L ++ +L G+ H+ + G + D + N L+ MY+KCG ++ A +F
Sbjct: 547 FTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSS 606
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ W +MIS YAQ G ++EALR+F M + P+ VT +S++S C G +E G
Sbjct: 607 SVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDG 666
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIAGC 421
N G++ + +++ + + G + +ARE + P +V W ++++ C
Sbjct: 667 LQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALV--WRSLLSAC 724
Query: 422 ALNG 425
+ G
Sbjct: 725 RVFG 728
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 166/323 (51%), Gaps = 3/323 (0%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L A + K + + VH + G+ DV + N + SY K + A +F + R
Sbjct: 46 LLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNR- 104
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRL 265
+VSW+S+V+ T + +L ++ +L+ + S++ + V + G
Sbjct: 105 -NLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQ 163
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
VHS+ I GF DV V +L+ +Y+K G+ID AR++FDG+ +T V+WTA+I+GY + G
Sbjct: 164 VHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGR 223
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ +L+LF M + +PD + S+++ C G L+ GK Y K +V N
Sbjct: 224 SEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNV 283
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LID Y+KCG + + LF L K ++SWTTMIAG N EA++L ++ + +P+
Sbjct: 284 LIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPD 343
Query: 446 RVTFLAVLQACTHTGFLEKGWAI 468
+VL +C L+ G I
Sbjct: 344 EYACSSVLTSCGSVDALQHGRQI 366
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 142/283 (50%), Gaps = 11/283 (3%)
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +LL + V ++++ R VH + +G DV + N L+ Y K G + A LFD +
Sbjct: 43 LANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMP 102
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLF--FAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+R VSW++++S Y Q G ++AL F F +L + + + S+I C Q E G
Sbjct: 103 NRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYI-LASIIRACVQRDGGEPG 161
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+Y G ++V V +L+ +Y+K G I AR +F L K V+WT +I G +
Sbjct: 162 SQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS 221
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNP 482
G +L LF+ +ME ++ P++ ++L AC+ G+L+ G I +++ + K
Sbjct: 222 GRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETK-----M 276
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
++ Y+ + D + G++K + +K+ W T++
Sbjct: 277 DVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIIS-WTTMIAG 318
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/513 (34%), Positives = 268/513 (52%), Gaps = 6/513 (1%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKS-VHSF 166
WN L A+ L L+ M G + + F L A A L +L S H
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCA--ALSLPILGSQFHGQ 74
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+G + V IS Y K + A VF + V +N++V+G K
Sbjct: 75 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+++ +R M G ++ T++ L+ + V P L G +H + YGFD DVSV+N I
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
+MY KCG ++ A+ LFD + + +SW AM+SGYAQ G L L+ M+ G PD V
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++ ++S C GA +G + + G N + NALI+MY++CG++ A+ +F +
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
PE+ +VSWT +I G ++G A+ LF +++ + P+ F+ VL AC+H G ++G
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG- 373
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + + P +HYSCM DLLGR G+LKEA ++SMPIK D +WG LL AC
Sbjct: 374 -LEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGAC 432
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
KIH N+E+ E + +LEP + YV ++N Y+ GV IR MMK ++KK PG
Sbjct: 433 KIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPG 492
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
S + G+ F DR H +S+ Y VL+ L
Sbjct: 493 CSYVELKGRVHPFIVGDRNHLQSDEIYRVLEEL 525
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 233/479 (48%), Gaps = 22/479 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+Q+RE + + + L L+ QM ++ PN TFPF K+CA LS I HG I
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 82 K-----SPFV---------KCDRLDCAYKIFDE--MAVRDVASWNAMLVGFAQMGFLENV 125
K PFV K +D A K+F+E + + +NA++ G+
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF M G+ + VT++GL A + +L L S+H + G D+DVSV N +I+
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC + A+ +F E ++ ++SWN+MV+G + L YR+M NG D
Sbjct: 197 YMKCGSVNYAQKLF--DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+V +LSS A G V GF + + N LI+MY++CG++ A+ +FDG+
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG- 364
+RT VSWTA+I GY G + A++LF M +G PD + ++S C +G + G
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 374
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCAL 423
++F + L+ + ++D+ + G + +A+ L ++P K W ++ C +
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ A F +++EL+ P + + +L KG I +K + +P
Sbjct: 435 HKNVELAELAFERVIELE--PENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 491
>gi|297833250|ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 676
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 283/539 (52%), Gaps = 9/539 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG--IQAD 140
S +VKC +L A K+FDEM VRDV S N + GF + E+ L M G QA
Sbjct: 98 SLYVKCGKLGDALKLFDEMPVRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDQAT 157
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
V+ + + + K +H+ I G D ++SV N I+SY KC VF
Sbjct: 158 LTIVLSVCDTP---EFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRWVFS 214
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
E R V++W ++++G + +D L + M + T +S L++ + +
Sbjct: 215 --EMAHRNVITWTAVISGLIENELHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMI 272
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
V+G+ +H+ +G + ++ + + L+ MYSKCG I+ A +F+ + VS T ++ G
Sbjct: 273 VEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGL 332
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
AQ G +EA++ F M AG D V +++ +L LGK + N
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNT 392
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V N LI+MYSKCG + D++ +F +P++ VSW +MIA A +G + AL L+ ++ L
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
+++P VTFL++L AC+H G ++KG + + GI P +HY+C+ D+LGR G +
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI--KPRTEHYTCIIDMLGRAGLM 510
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
KEA F+ S+P+K D IW LL AC H + E+GEY A LF+ P S+A ++ MAN Y
Sbjct: 511 KEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFETAPDSSAAHILMANIY 570
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+ G+W A MK V K G S + KT +F ED+ H ++E Y VL L
Sbjct: 571 SSRGKWKERAKTIKRMKEMGVTKETGISWIEMEKKTHSFVVEDKMHPQAEAIYDVLSGL 629
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 136/323 (42%), Gaps = 20/323 (6%)
Query: 22 WNSQIREAVNKNEAHKT-LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W + I + +NE H+ L LF M++ + PN++T+ AC+ ++ Q IH +
Sbjct: 224 WTAVISGLI-ENELHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMIVEGQQIHALL 282
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + KC ++ A+KIF+ D S +LVG AQ G E +
Sbjct: 283 WKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGLAQNGSEEEAI 342
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ F M G++ D V + + L L K +HS I + V N I+ Y
Sbjct: 343 QFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNTFVNNGLINMY 402
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC DL ++ VF + + R VSWNSM+A +L Y M + T
Sbjct: 403 SKCGDLTDSQTVFRRMPK--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Query: 247 VVSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+SLL + + +GR L++ +G +I M + G + A+ D +
Sbjct: 461 FLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKSFIDSL 520
Query: 306 CDRTRVS-WTAMISGYAQKGDLD 327
+ W A++ + GD +
Sbjct: 521 PLKPDCKIWQALLGACSFHGDTE 543
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/577 (31%), Positives = 288/577 (49%), Gaps = 26/577 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S+ + WN I H L LF M + PN T + +C + + +
Sbjct: 106 SADVVSWNVLICGYSQHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRS 165
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H +K S + KCD L+ + +F EM ++V SWN M+ + Q GF
Sbjct: 166 VHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGF 225
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ + F M G Q VT+M L A ++ ++VH + I G D SV +
Sbjct: 226 EDKAVLCFKEMLKEGWQPSPVTMMNLMSAN------AVPETVHCYIIKCGFTGDASVVTS 279
Query: 182 WISSYAKCDDLKMAELVF-CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ YAK MA+L++ C + ++S +++ + + + ++ + +
Sbjct: 280 LVCLYAKQGFTDMAKLLYEC---YPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDI 336
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D ++S+L P G H +G+ G D V N LIS YS+ +I +A
Sbjct: 337 KPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALS 396
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LF ++ ++W +MISG Q G +A+ LF M G+ PD +T+ S++SGC Q G
Sbjct: 397 LFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGY 456
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L +G+ Y +K ALIDMY+KCG + A ++FY++ + +V+W ++I+G
Sbjct: 457 LRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISG 516
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
+L G +A F +L E L P+++TFL VL ACTH G + G I + G+
Sbjct: 517 YSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLM- 575
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P L HY+C+ LLGR G KEA++ + +M I+ D+ +WG LL AC I +++GE +A
Sbjct: 576 -PTLQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSACWIQQEVKLGECLAK 634
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK 577
LF L + YV ++N YA+ GRWD VA +R MM+
Sbjct: 635 NLFLLNYKNGGFYVSLSNLYAIVGRWDDVARVRDMMR 671
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 234/456 (51%), Gaps = 31/456 (6%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS--------------DLIYSQMIHG 78
++A LL+FRQ+ Q+ PN+LTF + KAC S + I +Q++
Sbjct: 13 HDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKR 72
Query: 79 HIVKSPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
I + +V +D A ++F+++ DV SWN ++ G++Q G + L+LF
Sbjct: 73 GIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLF 132
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
+M + + T+ L + + +SVH+FGI G+ D + N S YAKC
Sbjct: 133 VHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKC 192
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
DDL+ ++L+F + E + V+SWN+M+ D ++ ++ M+ G++ T+++
Sbjct: 193 DDLEASQLLFQEMGE--KNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMN 250
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
L+S+ PE VH + I GF D SV+ +L+ +Y+K G D A++L++ +
Sbjct: 251 LMSANAVPET------VHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKD 304
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
+S T +IS Y++KG+++ A+ F PD V ++S++ G +G F
Sbjct: 305 LISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHG 364
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
Y GL ++ +V N LI YS+ I A LF+ EK +++W +MI+GC G+ +
Sbjct: 365 YGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSD 424
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
A++LF Q+ +P+ +T ++L C G+L G
Sbjct: 425 AMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIG 460
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G+ + V ALID Y K G AR+LF LP VVSW +I G + +G +AL LF
Sbjct: 73 GIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLF 132
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
++ RPN+ T ++L +C +G ++ G+ +P+L +
Sbjct: 133 VHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGI-KAGLGLDPQLSN 183
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 289/556 (51%), Gaps = 33/556 (5%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +F+ + ++ WN M G A + L L+ M +G+ + T L
Sbjct: 36 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 95
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--- 205
++ +K + +H + +G D D+ V + IS Y + L+ A VF R
Sbjct: 96 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 155
Query: 206 --------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
++ VVSWN+M++G ++L ++ MM
Sbjct: 156 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 215
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R D +T+VS++S+ ++ GR VHS +GF ++ ++N LI +Y KCG++++A
Sbjct: 216 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 275
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF+G+ + +SW +I GY EAL LF M +GE P+ VT+LS++ C G
Sbjct: 276 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 335
Query: 360 ALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
A+E+G+W Y G+ + +LIDMY+KCG I A+++F ++ + + SW M
Sbjct: 336 AIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAM 395
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I G A++G A D+F ++ + ++ P+ +TF+ +L AC+H+G L+ G I +D
Sbjct: 396 IFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYK 455
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I+ P+L+HY CM DLLG G KEA + + +M ++ D IW +LL ACK+H N+E+GE
Sbjct: 456 IT--PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGES 513
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A L K+EP + YV ++N YA GRW+ VA IR ++ +KK PG S I+
Sbjct: 514 YAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 573
Query: 598 TFTAEDRYHAESELTY 613
F D++H + Y
Sbjct: 574 EFIIGDKFHPRNREIY 589
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 218/459 (47%), Gaps = 63/459 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R ++ L L+ M + PN TFPF+ K+CAK Q IHGH++
Sbjct: 56 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMA------------------------- 102
K S +V+ RL+ A K+FD+ +
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 175
Query: 103 ------VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
++DV SWNAM+ G+A+ G + L LF M ++ D T++ + A +
Sbjct: 176 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
+ L + VHS+ G +++ + N I Y KC +++ A CG+ E L + V+SWN+
Sbjct: 236 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA----CGLFEGLSYKDVISWNT 291
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIH 272
++ G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H +
Sbjct: 292 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRL 351
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G S +LI MY+KCGDI++A+ +FD I +R+ SW AMI G+A G + A +
Sbjct: 352 KGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDI 411
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALI 387
F M PD +T + ++S C SG L+LG+ ++Y + L+ +I
Sbjct: 412 FSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEH----YGCMI 467
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
D+ G +A E+ + E V W +++ C ++G
Sbjct: 468 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 506
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 129/303 (42%), Gaps = 39/303 (12%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS---ARVLFDGICDRTRVSWTAMISGY 320
R++H+ I G ++ LI D A +F+ I + + W M G+
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
A D AL L+ M + G LP+ T ++ C +S A G+ + G ++
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT------------------------ 416
V +LI MY + G + DAR++F + VVS+T
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183
Query: 417 -------MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
MI+G A G EAL+LF ++M+ ++RP+ T ++V+ AC + +E G +
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
DD G N L + + DL + G+++ A + + K D W TL+ H
Sbjct: 244 -SWIDDHGFGSN--LKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLI-GGYTH 298
Query: 530 LNI 532
+N+
Sbjct: 299 MNL 301
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 295/603 (48%), Gaps = 56/603 (9%)
Query: 63 ACAKLSDLIYSQMIHGHIVKSPFVKCDR------------------LDCAYKIFDEMAVR 104
A + + L + + +H I++S K DR LD A +F+ +
Sbjct: 29 ALSSATSLTHLKQVHAQILRS---KLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKP 85
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+ N L ++ E L ++ MR G+ D + L +A K L +H
Sbjct: 86 ETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIH 145
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+G D+D V + YA C + A L+F + R VV+W+ M+ G
Sbjct: 146 GLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHR--DVVTWSIMIDGYCQSGL 203
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
F+D+L + M D + ++LS+ L G+++H + +D + +
Sbjct: 204 FNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSA 263
Query: 285 LISMYSKCGDID-------------------------------SARVLFDGICDRTRVSW 313
L++MY+ CG +D +AR +F+ + + V W
Sbjct: 264 LVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCW 323
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
+AMISGYA+ EAL LF M++ G PD VT+LS+I+ C GAL+ KW +
Sbjct: 324 SAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDK 383
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
G + + NALI+MY+KCGS+ AR +F +P K V+SWT MI+ A++G+ AL
Sbjct: 384 NGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRF 443
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADL 493
FHQ+ + ++ PN +TF+ VL AC+H G +E+G I ++ I+ P+ HY CM DL
Sbjct: 444 FHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNIT--PKHVHYGCMVDL 501
Query: 494 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPY 553
GR L+EAL+ V++MP+ + IWG+L+ AC++H IE+GE+ A L +L+P +
Sbjct: 502 FGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAH 561
Query: 554 VEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTY 613
V ++N YA RW+ V +R +MK + K G S F +N + F DR H ++ Y
Sbjct: 562 VFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIY 621
Query: 614 PVL 616
L
Sbjct: 622 EKL 624
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 218/464 (46%), Gaps = 45/464 (9%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N +RE E KTLL++ +M+ + + +FP + KA +++ L+ IHG K
Sbjct: 91 NRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAK 150
Query: 83 -----SPFVK---------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
PFV+ C R+ A +FD+M RDV +W+ M+ G+ Q G + L L
Sbjct: 151 LGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M+ ++ D + + + A A +LS K +H F + + D + + ++ YA
Sbjct: 211 FEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYAS 270
Query: 189 CDDLKMAELVF--------------------CGIEERLRTV---------VSWNSMVAGC 219
C + +A +F G E R+V V W++M++G
Sbjct: 271 CGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGY 330
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
D ++LN + M G + D T++S++++ AL Q + +H GF +
Sbjct: 331 AESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGAL 390
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+ N LI MY+KCG ++ AR +FD + + +SWT MIS +A GD ALR F ME
Sbjct: 391 PINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDE 450
Query: 340 GELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
P+ +T + ++ C +G +E G K F + + + ++D++ + + +
Sbjct: 451 NIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLRE 510
Query: 399 ARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
A EL A+P V+ W +++A C ++GE +L+ELD
Sbjct: 511 ALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELD 554
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 263/450 (58%), Gaps = 5/450 (1%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+++H+ + D+ + N ++ YAKC L+ A+ +F + + +VSW +++G +
Sbjct: 125 RAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTK--DMVSWTVLISGYS 182
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+ ++L + M++ GF+ + T+ SLL + + GR +H+ + YG+D++V
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V ++L+ MY++ + A+V+F+ + + VSW A+I+G+A+KG+ + +RLF M G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQG 302
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
P T S+ + C SG+LE GKW + G + + N LIDMY+K GSI DA+
Sbjct: 303 FEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAK 362
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++F L ++ +VSW ++I+G A +G EAL LF Q+++ ++PN +TFL+VL AC+H+G
Sbjct: 363 KVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 422
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
L++G + K ++ H+ + DLLGR G+L EA F++ MPIK A +WG
Sbjct: 423 LLDEGQYYFELMKKHK---IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWG 479
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
LL +C++H N+++G Y A +F+L+PH + P+V ++N YA GR A +R MMK +
Sbjct: 480 ALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESG 539
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
VKK P S I + F A D H E
Sbjct: 540 VKKEPACSWVEIENEVHVFVANDDSHPMRE 569
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 195/407 (47%), Gaps = 17/407 (4%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAY 95
+EP + + C L L + IH HI S F KC L+ A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
+FD+M +D+ SW ++ G++Q G L LF M +G Q + T+ L +A+
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ +H+F + G D +V V ++ + YA+ ++ A+++F + + VVSWN++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA--KNVVSWNAL 278
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+AG + + + + M+ GF T S+ ++ +L QG+ VH+H I G
Sbjct: 279 IAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG 338
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+ NTLI MY+K G I A+ +F + + VSW ++ISGYAQ G EAL+LF
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 398
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M A P+ +T LS+++ C SG L+ G+++ ++ V ++D+ + G
Sbjct: 399 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 458
Query: 396 IGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELD 441
+ +A + +P K + W ++ C ++ + Q+ ELD
Sbjct: 459 LNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELD 505
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 17/321 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I +A + L LF +M +PN T + KA + + +H +
Sbjct: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSL 233
Query: 82 KSPF-----VKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + V LD A IF+ +A ++V SWNA++ G A+ G E+V+R
Sbjct: 234 KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMR 293
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G + T + A + L K VH+ I G + NT I YA
Sbjct: 294 LFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYA 353
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K +K A+ VF + + + +VSWNS+++G ++L + M+ + + T
Sbjct: 354 KSGSIKDAKKVFRRLVK--QDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITF 411
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+S+L++ L +G+ + + V+ T++ + + G ++ A + +
Sbjct: 412 LSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPI 471
Query: 308 R-TRVSWTAMISGYAQKGDLD 327
+ T W A++ ++D
Sbjct: 472 KPTAAVWGALLGSCRMHKNMD 492
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 70/113 (61%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ M++ C L+ G+ + S +D++++ N +++MY+KCGS+ +A++L
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
F +P K +VSWT +I+G + +G+ EAL LF +++ L +PN T ++L+A
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 215
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ + WN+ I K E + LF QM + EP + T+ + ACA L +
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKW 328
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H H++KS + K + A K+F + +D+ SWN+++ G+AQ G
Sbjct: 329 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 388
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+LF M +Q + +T + + A H+
Sbjct: 389 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHS 421
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 314/643 (48%), Gaps = 46/643 (7%)
Query: 20 NQWNSQIREAVN---KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
N ++ QI++ + +N++ ++ + + P + I A A + Y++ +
Sbjct: 4 NYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV 63
Query: 77 HGHIVKSPFVKCDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
I + + L AY F+++ RD +WN ++ G++ G + +
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 127 RLFYNMRLVGIQADF--VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ YN + A+ VT+M + + + H+SL K +H I +G ++ + V + +
Sbjct: 124 KA-YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182
Query: 185 SYAKCDDLKMAELVFCGIEER----------------------------LRTVVSWNSMV 216
YA + A+ VF G+++R + VSW +M+
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMI 242
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G +++ +R M G ++D S+L + A+ +G+ +H+ I F
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ V + LI MY KC + A+ +FD + + VSWTAM+ GY Q G +EA+++F M
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ +G PD T+ IS C +LE G F A + GL V V N+L+ +Y KCG I
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
D+ LF + + VSWT M++ A G VE + LF ++++ L+P+ VT V+ AC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+ G +EKG + + GI P + HYSCM DL R G+L+EA+ F+ MP DA
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIV--PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA 540
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
W TLL AC+ N+EIG++ A L +L+PH A Y +++ YA G+WD VA +R M
Sbjct: 541 IGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGM 600
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+ VKK PGQS GK +F+A+D + Y L+ L
Sbjct: 601 REKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEEL 643
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + W + + A + + +F M+++ I+P++ T ACA +S L
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
HG + S + KC +D + ++F+EM VRD SW AM+ +AQ G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
++LF M G++ D VT+ G+ A A
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/606 (31%), Positives = 299/606 (49%), Gaps = 18/606 (2%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-----SPFVKCDRLDC-- 93
LF ++ E N F + K + +++HG ++K + F+ +D
Sbjct: 33 LFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYS 92
Query: 94 -------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
A ++FDE++ +D+ SW M+ +A+ L F MR+ G + + T G
Sbjct: 93 VSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAG 152
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ +A + ++ K+VH + + D+ V + Y +C D A F + +
Sbjct: 153 VLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKN- 211
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
V+ W+ M++ + + +L + M + T S+L + E+L + +
Sbjct: 212 -DVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTI 270
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H H + G DV V N L++ Y+KCG I+ + LF+ + DR VSW +I Y Q GD
Sbjct: 271 HGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDG 330
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+ AL LF M VT S++ C ALELG +V V NAL
Sbjct: 331 ERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNAL 390
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY+KCGSI DAR +F L + VSW +I G +++G VEA+ +F+ + E +P+
Sbjct: 391 IDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDE 450
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TF+ VL AC++TG L++G D GI P ++HY+CM L+GR G L +A+ F
Sbjct: 451 LTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIE--PCMEHYTCMVWLMGRSGNLDQAVKF 508
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
++ +P + IW LL AC IH ++E+G A + +LEP A +V ++N YA RW
Sbjct: 509 IEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRW 568
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
VA +R MKR VKK PG S G FT D HA+ +L +L+ L + +R+
Sbjct: 569 GNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKA 628
Query: 627 AYSSHL 632
YS L
Sbjct: 629 GYSPQL 634
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 208/444 (46%), Gaps = 18/444 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + W I + + L F QM+ +PNN TF + KAC L + +
Sbjct: 109 SKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKT 168
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H ++K+ + +C D A++ F +M DV W+ M+ FAQ G
Sbjct: 169 VHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQ 228
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E L +F MR + + T + QA+ + L L K++H + G+ DV V N
Sbjct: 229 SEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNA 288
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ YAKC ++ + +F + + R VSWN+++ + +L+ + +M+ +
Sbjct: 289 LMACYAKCGCIEQSMELFEALSD--RNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQ 346
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T S+L + AL G VH + DV+V N LI MY+KCG I AR +
Sbjct: 347 ATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFM 406
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + R +VSW A+I GY+ G EA+++F M+ PD +T + ++S C +G L
Sbjct: 407 FDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRL 466
Query: 362 ELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
+ GK +F + G++ + ++ + + G++ A + +P E V+ W ++
Sbjct: 467 DEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLG 526
Query: 420 GCALNGEFVEALDLFHQLMELDLR 443
C ++ + +++EL+ R
Sbjct: 527 ACVIHNDVELGRISAQRVLELEPR 550
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 204/433 (47%), Gaps = 6/433 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FDEM R+ S+ ++ G+AQ LF + G + + + + + +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + VH + +G ++ + I +Y+ + MA VF I + +VSW M+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSK--DMVSWTGMI 119
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
A D F ++L F+ M GF+ + T +L + + + G+ VH + ++
Sbjct: 120 ASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
D+ V L+ +Y++CGD D A F + + W+ MIS +AQ G ++AL +F M
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
A +P+ T S++ +L+L K +A GL +V V NAL+ Y+KCG I
Sbjct: 240 RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCI 299
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+ ELF AL ++ VSW T+I G+ AL LF ++ ++ VT+ ++L+AC
Sbjct: 300 EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRAC 359
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
LE G + + K I Y ++ + + D+ + G +K+A F+ M D
Sbjct: 360 ATLAALELGLQVHCLTA--KTI-YGQDVAVGNALIDMYAKCGSIKDA-RFMFDMLDLRDK 415
Query: 517 GIWGTLLCACKIH 529
W ++C +H
Sbjct: 416 VSWNAIICGYSMH 428
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 6/160 (3%)
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-ELPDLV--TVLSMISGCG 356
++FD + +R VS+ +I GYAQ EA LF + G EL V TVL ++
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ ELG+ G N + ALID YS G + ARE+F + K +VSWT
Sbjct: 61 WA---ELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTG 117
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
MIA A N F EAL+ F Q+ +PN TF VL+AC
Sbjct: 118 MIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC 157
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 326/634 (51%), Gaps = 27/634 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I+ + + L L+ +M + ++ ++ T+PF+ K+ +S L + IH ++
Sbjct: 94 WNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVI 153
Query: 82 KSPFVK----CD-------RLDCAY---KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K FV C+ +L C++ K+F+EM RD+ SWN+M+ G+ + L
Sbjct: 154 KLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLM 213
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISSY 186
LF M G + D + M A H ++ K +H + ++ DV V + + Y
Sbjct: 214 LFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMY 273
Query: 187 AKCDDLKMAELVF-CGIEERLRTVVSWNSMVAGCTYGDKFDDS-LNFYRHMMYNGFRLDV 244
+K ++ AE +F C I+ R +V+WN ++ + D+ L F + NG + DV
Sbjct: 274 SKYGEVSYAERIFKCIIQ---RNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDV 330
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+++LL + C A+++GR +H + + GF + + LI MY + G + SA V+FD
Sbjct: 331 ITLINLLPA--C--AILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDR 386
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I ++ +SW ++I+ Y Q G AL LF + + LPD T+ S++ +S +L G
Sbjct: 387 IAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEG 446
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ Y N ++ N+L+ MY+ CG + DAR+ F + K VVSW ++I A++
Sbjct: 447 RQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVH 506
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G ++ LF +++ + PN+ TF ++L AC+ +G +++GW + GI +P +
Sbjct: 507 GFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGI--DPGI 564
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY M DL+GR G A F++ MP A IWG+LL A + H +I + E+ A +FK
Sbjct: 565 EHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFK 624
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
+E + YV + N YA RW+ V I+ +M+ + + +S KT T DR
Sbjct: 625 MEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNGDR 684
Query: 605 YHAESELTYPVLDCLA-LHSREEAYSSHLKWIPE 637
H E+ Y VLD ++ + EE S++ ++ +
Sbjct: 685 SHVETNKIYEVLDIVSRMIGEEEEEDSYVHYVSK 718
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 154/574 (26%), Positives = 264/574 (45%), Gaps = 42/574 (7%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWN 110
+P L K +L+D ++ + G F ++ A ++FDEM D WN
Sbjct: 42 KPVRLVLRDRYKVTKQLNDPALTRALRG------FADSGLMEDALQLFDEMNKADTFVWN 95
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
M+ GF G L+L+ M G++AD T + ++ L K +H+ I +
Sbjct: 96 VMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKL 155
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
+DV VCN+ IS Y K AE VF + E R +VSWNSM++G + SL
Sbjct: 156 RFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE--RDIVSWNSMISGYLALEDGFRSLM 213
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMY 289
++ M+ GF+ D + +S L + + G+ +H H + + DV V+ +++ MY
Sbjct: 214 LFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMY 273
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTV 348
SK G++ A +F I R V+W +I YA+ + +A F M E G PD++T+
Sbjct: 274 SKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITL 333
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
++++ C A+ G+ YA G ++++ ALIDMY + G + A +F + E
Sbjct: 334 INLLPAC----AILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAE 389
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
K ++SW ++IA NG+ AL+LF +L + L P+ T ++L A + L +G I
Sbjct: 390 KNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQI 449
Query: 469 SII----QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
+Y I N + Y+ D L++A + +K D W +++
Sbjct: 450 HAYIVKSRYGSNTIILNSLVHMYAMCGD-------LEDARKCFNHVLLK-DVVSWNSIIM 501
Query: 525 ACKIHLNIEIGEYVAYCLF------KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
A +H G ++ CLF K++P+ + + + ++ G D MKR
Sbjct: 502 AYAVH---GFGR-ISVCLFSEMIASKVDPNKST-FASLLAACSISGMVDEGWEYFESMKR 556
Query: 579 NQVKKFPGQS----LFHINGKTCTFTAEDRYHAE 608
+ PG + + G+T F++ R+ E
Sbjct: 557 -EYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIRE 589
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 193/406 (47%), Gaps = 23/406 (5%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WNS I + + ++L+LF++M + +P+ + AC+ + + +H
Sbjct: 192 IVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHC 251
Query: 79 HIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
H V+S + K + A +IF + R++ +WN ++ +A+ +
Sbjct: 252 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVT 311
Query: 124 NVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ F M G+Q D +T++ L A + +++H + + G + +
Sbjct: 312 DAFLCFQKMSEQNGLQPDVITLINLLPACAILEG----RTIHGYAMRRGFLPHIVLDTAL 367
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I Y + LK AE++F I E + ++SWNS++A K +L ++ + +
Sbjct: 368 IDMYGEWGQLKSAEVIFDRIAE--KNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLP 425
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D TT+ S+L ++ +L +GR +H++ + + + ++N+L+ MY+ CGD++ AR F
Sbjct: 426 DSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCF 485
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ + + VSW ++I YA G ++ LF M A+ P+ T S+++ C SG ++
Sbjct: 486 NHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVD 545
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
G ++F++ G+ + ++D+ + G+ A+ +P
Sbjct: 546 EGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMP 591
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 288/539 (53%), Gaps = 6/539 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+D A +FD++ +D+ SW M+ +A+ F E L+LF MR++G + + T+ G ++
Sbjct: 187 VDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKS 246
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT-V 209
+ + ++ KSVH + D D+ V + YAK ++ A+ +F EE +T +
Sbjct: 247 CLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLF---EEMPKTDL 303
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+ W+ M+A D+ ++L+ + M + T S+L + +L G+ +HS
Sbjct: 304 IPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSC 363
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ +G + +V V N ++ +Y+KCG+I+++ LF+ + DR V+W +I GY Q GD + A
Sbjct: 364 VLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERA 423
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+ LF M P VT S++ ALE G + + +V N+LIDM
Sbjct: 424 MNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDM 483
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y+KCG I DAR F + ++ VSW MI G +++G +EAL+LF + D +PN++TF
Sbjct: 484 YAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTF 543
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+ VL AC++ G L KG A + K P ++HY+CM LLGR G+ EA+ +
Sbjct: 544 VGVLSACSNAGLLYKGQA--HFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGE 601
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
+ + +W LL AC IH +++G A + ++EPH A +V ++N YA GRWD V
Sbjct: 602 IAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNV 661
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
A +R M++ +V+K PG S G F+ D H + +L +L+ L +R+ Y
Sbjct: 662 AFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGY 720
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 223/476 (46%), Gaps = 20/476 (4%)
Query: 68 SDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAML 113
+D I + +H HI+K +V+ + L A K+FDEM + S+ +
Sbjct: 49 ADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLA 108
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G+++ L + G + + L + + L ++H+ +G
Sbjct: 109 QGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHH 168
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
AD V I +Y+ ++ +A VF I + +VSW MVA +++SL +
Sbjct: 169 ADAFVGTALIDAYSVRGNVDVARHVFDDI--CCKDMVSWTGMVACYAENCFYEESLQLFN 226
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M G++ + T+ L S + EA G+ VH + +D D+ V L+ +Y+K G
Sbjct: 227 QMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSG 286
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+I A+ LF+ + + W+ MI+ YAQ EAL LF M +P+ T S++
Sbjct: 287 EIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQ 346
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C S +L+LGK + GL NV V NA++D+Y+KCG I ++ +LF LP++ V+
Sbjct: 347 ACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVT 406
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W T+I G G+ A++LF ++E D++P VT+ +VL+A LE G I +
Sbjct: 407 WNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTI 466
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
YN + + + D+ + G++ +A M K D W ++C +H
Sbjct: 467 K---TMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMH 518
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 195/406 (48%), Gaps = 18/406 (4%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-------------- 82
++L LF QM+ +PNN T K+C L + +HG +K
Sbjct: 220 ESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALL 279
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ K + A ++F+EM D+ W+ M+ +AQ + L LF MR + +
Sbjct: 280 ELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNF 339
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + QA + L L K +HS + G++++V V N + YAKC +++ + +F +
Sbjct: 340 TFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEEL 399
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+ R V+WN+++ G + ++N + HM+ + + T S+L + AL
Sbjct: 400 PD--RNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEP 457
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G +HS I ++ D V N+LI MY+KCG I+ AR+ FD + R VSW AMI GY+
Sbjct: 458 GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSM 517
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVM 381
G EAL LF M+ P+ +T + ++S C +G L G+ F++ + +K +
Sbjct: 518 HGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIE 577
Query: 382 VCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGE 426
++ + + G +A +L + + V+ W ++ C ++ +
Sbjct: 578 HYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKK 623
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 20/315 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+ I + + + L LF +M+Q + PNN TF + +ACA L + IH ++
Sbjct: 306 WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL 365
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC ++ + K+F+E+ R+ +WN ++VG+ Q+G E +
Sbjct: 366 KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMN 425
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M +Q VT + +A+ L +HS I + D V N+ I YA
Sbjct: 426 LFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYA 485
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A L F + + R VSWN+M+ G + ++LN + M + + + T
Sbjct: 486 KCGRINDARLTFDKMNK--RDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTF 543
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV--INTLISMYSKCGDIDSARVLFDGI 305
V +LS+ L +G+ H + +D+ + ++ + + G D A L I
Sbjct: 544 VGVLSACSNAGLLYKGQ-AHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEI 602
Query: 306 CDRTRV-SWTAMISG 319
+ V W A++
Sbjct: 603 AYQPSVMVWRALLGA 617
>gi|6729044|gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
Length = 770
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 287/553 (51%), Gaps = 5/553 (0%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + KC +L A K+FDEM +RDV S N + GF + E+ L M G D
Sbjct: 98 SLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHA 156
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + + + K +H+ I G D ++SV N I+SY KC VF G+
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM 216
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R V++ ++++G + +D L + M + T +S L++ + +V+
Sbjct: 217 SHR--NVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVE 274
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H+ YG + ++ + + L+ MYSKCG I+ A +F+ + VS T ++ G AQ
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +EA++ F M AG D V +++ +L LGK + N V
Sbjct: 335 NGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV 394
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N LI+MYSKCG + D++ +F +P++ VSW +MIA A +G + AL L+ ++ L++
Sbjct: 395 NNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV 454
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+P VTFL++L AC+H G ++KG + + GI P +HY+C+ D+LGR G LKE
Sbjct: 455 KPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI--EPRTEHYTCIIDMLGRAGLLKE 512
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A F+ S+P+K D IW LL AC H + E+GEY A LF+ P S++ ++ +AN Y+
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSS 572
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
G+W A MK V K G S I KT +F ED+ H ++E Y VL L
Sbjct: 573 RGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPV 632
Query: 623 SREEAYSSHLKWI 635
+E Y ++I
Sbjct: 633 MVDEGYRPDKRFI 645
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 19/313 (6%)
Query: 32 KNEAHKT-LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-------- 82
+NE H+ L LF M++ + PN++T+ AC+ ++ Q IH + K
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 83 ------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
+ KC ++ A+ IF+ D S +LVG AQ G E ++ F M G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ D V + + L L K +HS I + V N I+ Y+KC DL ++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
VF + + R VSWNSM+A +L Y M + T +SLL +
Sbjct: 413 TVFRRMPK--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSH 470
Query: 257 PEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WT 314
+ +GR L++ +G + +I M + G + A+ D + + W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 315 AMISGYAQKGDLD 327
A++ + GD +
Sbjct: 531 ALLGACSFHGDTE 543
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 287/560 (51%), Gaps = 41/560 (7%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D A +F + + WN ML G+A + L+L+ M +G+ + T L
Sbjct: 14 DGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLL 73
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--- 205
++ +K + +H + +G + D+ V + IS YA+ L+ A VF R
Sbjct: 74 KSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVV 133
Query: 206 --------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
++ VVSWN+M++G + ++L ++ MM
Sbjct: 134 SYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN 193
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R D T+V++LS+ ++ GR VHS +GF ++ ++N LI +YSKCG +++A
Sbjct: 194 VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETAC 253
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF+G+ + VSW +I GY EAL LF M +GE P+ VT++S++ C G
Sbjct: 254 GLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLG 313
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNA------LIDMYSKCGSIGDARELFYALPEKIVVS 413
A+++G+W Y LKD V NA LIDMY+KCG I A ++F ++ K + S
Sbjct: 314 AIDIGRWIHVY-IDKKLKD---VTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 369
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W MI G A++G DLF ++ + + P+ +TF+ +L AC+H+G L+ G I
Sbjct: 370 WNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMT 429
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
D I+ P+L+HY CM DLLG G KEA + +++MP++ D IW +LL AC+ H N+E
Sbjct: 430 QDYDIT--PKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+ E A L K+EP + YV ++N YA G WD VA +R ++ +KK PG S I+
Sbjct: 488 LAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEID 547
Query: 594 GKTCTFTAEDRYHAESELTY 613
+ F D+ H + Y
Sbjct: 548 SEVHEFIVGDKLHPRNREIY 567
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 226/471 (47%), Gaps = 55/471 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ +R ++ L L+ M + PN+ TFPF+ K+CAK Q IHGH++
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93
Query: 82 K--------------SPFVKCDRLDCAYKI------------------------------ 97
K S + + RL+ A+K+
Sbjct: 94 KLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQE 153
Query: 98 -FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
FDE+ V+DV SWNAM+ G+A+ G + L LF M ++ D T++ + A ++
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
+ L + VHS+ G +++ + N I Y+KC ++ A CG+ E L + VVSWN+
Sbjct: 214 VELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA----CGLFEGLSCKDVVSWNT 269
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++ G T+ + + ++L ++ M+ +G + T+VS+L + A+ GR +H +
Sbjct: 270 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKL 329
Query: 275 FDLD--VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
D+ S+ +LI MY+KCGDI++A +F+ + ++ SW AMI G+A G + L
Sbjct: 330 KDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDL 389
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYS 391
F M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 390 FSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLG 449
Query: 392 KCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
G +A+E+ +P E V W +++ C +G A LM+++
Sbjct: 450 HSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVE 500
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/632 (28%), Positives = 305/632 (48%), Gaps = 18/632 (2%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WNS I + + +F++M+Q + +TF I AC L + + +
Sbjct: 225 SVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVR 284
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I ++ F +C + A ++F M ++ +W+A++ FA G
Sbjct: 285 ESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCG 344
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LR F M+ GI + VT + L L L +H G+D ++ N +
Sbjct: 345 EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALV 404
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y +C+ A VF +E L ++SWNSM+ ++ DD+L +R M G + D
Sbjct: 405 NVYGRCESPDDARTVFDQLE--LPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPD 462
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+++L + +LVH G V +L++MY+K G++D A V+
Sbjct: 463 RVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQ 522
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ ++ +W +I+GYA G EAL + ++ D VT +S+++ C S +L
Sbjct: 523 EMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAE 582
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK + A GL +V+V NAL +MYSKCGS+ +AR +F ++P + VSW M+ A
Sbjct: 583 GKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQ 642
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+GE E L L ++ + ++ N +TF++VL +C+H G + +G D+GI E
Sbjct: 643 HGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTE 702
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
HY C+ DLLGR GKL+EA ++ MP++ W +LL AC++ +++ G+ A L
Sbjct: 703 --HYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLL 760
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+L+P +++ V ++N Y+ G W A +R M +VKK PG S + K F D
Sbjct: 761 ELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRD 820
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
H + Y ++ L RE Y K +
Sbjct: 821 TSHPRAAEIYDKVEELCFAMREAGYVPDTKMV 852
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 247/530 (46%), Gaps = 21/530 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R+ + WN I + + L LF M + PN +T + +C +L
Sbjct: 19 RARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGI 78
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++H ++ F KC L A +F+EMA ++V +WNAML ++ G
Sbjct: 79 LVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQG 138
Query: 121 FL-ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ + LF M L G++A+ +T + + + + L K +HS DV V
Sbjct: 139 CCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVN 198
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+++Y KC L A VF G+ R+V +WNSM++ + ++ ++ ++ M G
Sbjct: 199 TALVNTYTKCGSLTDARKVFDGMP--CRSVGTWNSMISAYSISERSGEAFFIFQRMQQEG 256
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R D T +S+L + V PE L G+ V F+LD+ V LI+MY++C + A
Sbjct: 257 ERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAA 316
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F + ++W+A+I+ +A G EALR F M+ G LP+ VT +S+++G
Sbjct: 317 QVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPS 376
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
LE GL D + NAL+++Y +C S DAR +F L ++SW +MI
Sbjct: 377 GLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIG 436
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+AL LF + + ++P+RV F+ +L ACT G + + ++ G+
Sbjct: 437 IYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLG 495
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+P + + + ++ + G+L A +Q M + W L+ +H
Sbjct: 496 GSPLVQ--TSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLINGYALH 542
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 245/535 (45%), Gaps = 45/535 (8%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ +C L A F ++ R+V SWN M+ ++ + L LF+ M L G+ + +T+
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + + + L VH+ + G + V ++ Y KC L A+ VF + E
Sbjct: 62 VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121
Query: 205 RLRTVVSWNSMVA-----GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ VV+WN+M+ GC + ++ + M+ G + +V T +++L+S V P+A
Sbjct: 122 K--NVVTWNAMLGVYSLQGCCW----KLAVELFTRMLLEGVKANVITFLNVLNSVVDPDA 175
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L +G+ +HS LDV V L++ Y+KCG + AR +FDG+ R+ +W +MIS
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y+ EA +F M+ GE D VT LS++ C L+ GK + +
Sbjct: 236 YSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELD 295
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V ALI MY++C S DA ++F + + +++W+ +I A +G EAL F + +
Sbjct: 296 LFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQ 355
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISII----QYDDKGISYN-------------- 481
+ PNRVTF+++L T LE+ I ++ DD N
Sbjct: 356 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDD 415
Query: 482 ----------PELDHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKI 528
P L ++ M + + + +AL ++M I+ D + T+L AC I
Sbjct: 416 ARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTI 475
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVE--MANKYALGGRWDGVANIRTMMKRNQV 581
+ + V C+ + +P V+ + N YA G D I M Q+
Sbjct: 476 GSHGRTRKLVHQCV-EESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQI 529
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYS+CG + A F I R VSW MIS Y+ EAL LF AM G P+ +T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
++++++ CG L G + G N +V AL++MY KCG++ DA+ +F +
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 408 EKIVVSWTTMIAGCALNG-EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
EK VV+W M+ +L G + A++LF +++ ++ N +TFL VL + L KG
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 467 AI-SIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
I S ++ + LD + + + + + G L +A MP +S G W +++
Sbjct: 181 FIHSCVRESEHS------LDVFVNTALVNTYTKCGSLTDARKVFDGMPCRS-VGTWNSMI 233
Query: 524 CACKI 528
A I
Sbjct: 234 SAYSI 238
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/558 (32%), Positives = 290/558 (51%), Gaps = 33/558 (5%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A +F + + SWN M+ G A + L L+ M +G+ + T L ++
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER----- 205
+K K +H+ + G+ D+ V + IS YA+ ++ A VF R
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 206 ------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ VVSWN+M++G ++ ++L + MM +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D +T+ ++LS+ + GR +HS ++GF ++ ++N LI +YSKCG+++ A L
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+G+ + +SW +I GYA EAL +F M GE P+ VT+LS++ C GA+
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 362 ELGKWFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
++G+W Y G+ N + +LIDMY+KCG+I A ++F + K + S MI
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A++G A DL ++ + + P+ +TF+ +L AC+H G + G I D I
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P+L+HY CM DLLGR G KEA + + SM ++ D IWG+LL ACKIH N+E+GE +A
Sbjct: 448 --PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIA 505
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L K+EP + YV ++N YA RWD VA +RT++ +KK PG S I+ F
Sbjct: 506 QKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEF 565
Query: 600 TAEDRYHAESELTYPVLD 617
D++H +++ Y +L+
Sbjct: 566 LIGDKFHPQNKEIYKMLE 583
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 232/488 (47%), Gaps = 56/488 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR ++ L L+ M + PN+ TFPF+ K+CAK + IH I+
Sbjct: 46 WNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQIL 105
Query: 82 K---------------------------------------------SPFVKCDRLDCAYK 96
K + + +D A K
Sbjct: 106 KYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQK 165
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FDE+ ++DV SWNAM+ G+A++G + L LF M + ++ D T+ + H+ +
Sbjct: 166 MFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGN 225
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L + +HS+ + G +++ + N I Y+KC +++ A +F G++ + V+SWN+++
Sbjct: 226 VELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQ--YKDVISWNTLI 283
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIHYG 274
G Y + ++L ++ M+ G + T++S+L + A+ GR +H + G
Sbjct: 284 GGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKG 343
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ S+ +LI MY+KCG+I++A +FD I +++ S AMI G+A G D A L
Sbjct: 344 IITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLS 403
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M+ G PD +T + ++S C +G +LG K F + ++ + +ID+ +
Sbjct: 404 RMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRS 463
Query: 394 GSIGDARELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR-PNRVTF 449
G +A EL ++ P+ ++ W +++ C ++ + +LM+++ + P
Sbjct: 464 GLFKEAEELINSMTMEPDGVI--WGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVL 521
Query: 450 LAVLQACT 457
L+ + A +
Sbjct: 522 LSNIYATS 529
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 200/663 (30%), Positives = 326/663 (49%), Gaps = 53/663 (7%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI ++ WNS I E + FR M EP++ T +A AC+ L
Sbjct: 70 FDRITERDQVS-WNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRK 128
Query: 70 ---LIYSQMIHG-------------HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
L + IHG + + + + K RLD A + RD+ +WN+M+
Sbjct: 129 RDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMI 188
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
F+Q L M L G++ D VT + A H L K +H++ +
Sbjct: 189 SSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALR---- 244
Query: 174 ADVSVCNTWISS-----YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
D + N+++ S Y C ++ LVF + +R + WN+M+AG + + +
Sbjct: 245 TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDR--KIGLWNAMIAGYAQSEHDEKA 302
Query: 229 LNFYRHM-MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
L + M G + TT+ S++ ++V E + + +H + I G + + + N LI
Sbjct: 303 LMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALID 362
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL----- 342
MYS+ GDI +++ +FD + DR VSW +I+ Y G +AL L M+ E
Sbjct: 363 MYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDG 422
Query: 343 -----------PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
P+ +T+++++ GC AL GK YA L V V +AL+DMY+
Sbjct: 423 DYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYA 482
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-----DLRPNR 446
KCG + AR +F +P + V++W +I ++G+ E+L+LF ++ +++P
Sbjct: 483 KCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTE 542
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
VTF+A+ +C+H+G +++G ++ ++ GI P DHY+C+ DL+GR GK++EA
Sbjct: 543 VTFIALFASCSHSGMVDEGLSLFHKMKNEHGI--EPAPDHYACIVDLVGRAGKVEEAYGL 600
Query: 507 VQSMPIKSD-AGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
V +MP D G W +LL AC+I+ NIEIGE A L +L+P A+ YV ++N Y+ G
Sbjct: 601 VNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGL 660
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
WD N+R MK VKK PG S + F A D H +SE + L+ L+ ++
Sbjct: 661 WDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKK 720
Query: 626 EAY 628
E Y
Sbjct: 721 EGY 723
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 241/515 (46%), Gaps = 44/515 (8%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVK----------------SPFVKCDRLDCAY 95
P+N FP + KA A + +L + IH H+ K + + KC L AY
Sbjct: 8 PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
K+FD + RD SWN+++ + E ++ F M + G + T++ + A + +
Sbjct: 68 KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLR 127
Query: 156 H---LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L L K +H G S N ++ YAK L A+ + E+ R +V+W
Sbjct: 128 KRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFED--RDLVTW 184
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
NSM++ + ++F ++L F R M+ G + D T S+L + + L G+ +H++ +
Sbjct: 185 NSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALR 244
Query: 273 YGFDLDVSVINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
++ S + + L+ MY CG ++S R++FD + DR W AMI+GYAQ ++AL
Sbjct: 245 TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALM 304
Query: 332 LFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF MEAA L + T+ S++ + + + Y GL+ N + NALIDMY
Sbjct: 305 LFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMY 364
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD--------- 441
S+ G I ++ +F ++ ++ +VSW T+I + G +AL L H++ ++
Sbjct: 365 SRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDY 424
Query: 442 -------LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
+PN +T + VL C L KG I + S ++ S + D+
Sbjct: 425 NDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLAS---QVTVGSALVDMY 481
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G L A MPI+ + W ++ A +H
Sbjct: 482 AKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMH 515
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 8/240 (3%)
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKC 292
M+ +GF D ++L + + L G+ +H+H +G+ V++ NTL++MY KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + A +FD I +R +VSW ++IS + + + A++ F M G P T++SM
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 353 SGCG---QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
C + L LGK C NAL+ MY+K G + DA+ L ++
Sbjct: 121 LACSNLRKRDGLWLGKQIHG-CCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAI 468
+V+W +MI+ + N F+EAL +F +LM L+ ++P+ VTF +VL AC+H L G I
Sbjct: 180 DLVTWNSMISSFSQNERFMEAL-MFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEI 238
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 296/572 (51%), Gaps = 51/572 (8%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK----SPFV---------K 87
+ +M+ + E +N+ F I KAC++L +++ + +H IVK FV K
Sbjct: 1205 FYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDSFVMTGLIDMYGK 1264
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C +++C+ +F+E+ ++V SW +M+ G+ Q E L LF MR ++++ T+ +
Sbjct: 1265 CGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSI 1324
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A + L K VH + I + + T++ Y KC + A +++ + L
Sbjct: 1325 INAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIY----DELP 1380
Query: 208 TV--VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
T+ VSW M+ G T + +D L + + R D+ +LL F
Sbjct: 1381 TIDLVSWTVMIVGYTQARQPNDGLRLF----ADEIRSDLLPNSALLQVFF---------- 1426
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
V +N LI MY+KC I A +F G+ ++ ++W +MISGYAQ G
Sbjct: 1427 -----------QRVRFLNALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGS 1475
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL-KDNVMVCN 384
+ALRLF M + PD +T++S +S GA+++G Y+ GGL N+ +
Sbjct: 1476 AYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGT 1535
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
AL++ Y+KCG AR +F ++ K +++W+ MI G + G+ +L +F +++ DL+P
Sbjct: 1536 ALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKP 1595
Query: 445 NRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
N V F VL AC+++G +E+G + S+IQ ++ P + HY+CM DLL R GKL E
Sbjct: 1596 NEVIFTTVLSACSYSGMVEEGGRYFKSMIQ----DYNFVPSMKHYACMVDLLARSGKLDE 1651
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
ALDF++ MP++ D ++G L C ++ ++GE V + +L + A YV ++N YA
Sbjct: 1652 ALDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYAS 1711
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G+W V +R +M + + K PG SL N
Sbjct: 1712 DGKWGQVNEVRDLMLQRGLNKVPGYSLVETNA 1743
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 192/423 (45%), Gaps = 44/423 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I V N A + L+LF +M+ +E N T I A KL L + +HG+ +
Sbjct: 1286 WTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTKLRALHQGKWVHGYAI 1345
Query: 82 KS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ +VKC + A I+DE+ D+ SW M+VG+ Q + LR
Sbjct: 1346 KNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLR 1405
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + I++D + L Q V N I YA
Sbjct: 1406 LFAD----EIRSDLLPNSALLQVFFQR---------------------VRFLNALIDMYA 1440
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F G+ E + V++WNSM++G D+L + M D T+
Sbjct: 1441 KCHTISDAYAIFHGVLE--KDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITL 1498
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
VS LS+ A+ G +H++ + G F ++ + L++ Y+KCGD SAR++FD +
Sbjct: 1499 VSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMG 1558
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL-GK 365
+ ++W+AMI GY +GD +L +F M P+ V +++S C SG +E G+
Sbjct: 1559 VKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGMVEEGGR 1618
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+F + ++ ++D+ ++ G + +A + +P ++ V + + GC L
Sbjct: 1619 YFKSMIQDYNFVPSMKHYACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHGCGLY 1678
Query: 425 GEF 427
F
Sbjct: 1679 SRF 1681
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 145/329 (44%), Gaps = 28/329 (8%)
Query: 178 VCNT-WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+C+T + Y D++ A +VF + +W M+ D F D + FY M
Sbjct: 1153 LCDTKLVGVYGALGDVRSARMVFDQMPNP--DFYAWKVMIRWYFLNDLFVDVIPFYNRMR 1210
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+ D +L + +V+GR VH + G D V+ LI MY KCG ++
Sbjct: 1211 MSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVG-GPDSFVMTGLIDMYGKCGQVE 1269
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+ +F+ I D+ VSWT+MI+GY Q +E L LF M A + T+ S+I+
Sbjct: 1270 CSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFT 1329
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ AL GKW YA + + + +DMY KCG DAR ++ LP +VSWT
Sbjct: 1330 KLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTV 1389
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPN---------RVTFLAVL---QACTHT----- 459
MI G + + L LF + DL PN RV FL L A HT
Sbjct: 1390 MIVGYTQARQPNDGLRLFADEIRSDLLPNSALLQVFFQRVRFLNALIDMYAKCHTISDAY 1449
Query: 460 ----GFLEKG---WAISIIQYDDKGISYN 481
G LEK W I Y G +Y+
Sbjct: 1450 AIFHGVLEKDVITWNSMISGYAQNGSAYD 1478
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL N++ L+ +Y G + AR +F +P +W MI LN FV+ + F
Sbjct: 1147 GLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIP-F 1205
Query: 435 HQLMELDLRP-NRVTFLAVLQACTH 458
+ M + R + + F +L+AC+
Sbjct: 1206 YNRMRMSFRECDNIIFSIILKACSE 1230
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 289/556 (51%), Gaps = 33/556 (5%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +F+ + ++ WN M G A + L L+ M +G+ + T L
Sbjct: 51 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 110
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--- 205
++ +K + +H + +G D D+ V + IS Y + L+ A VF R
Sbjct: 111 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 170
Query: 206 --------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
++ VVSWN+M++G ++L ++ MM
Sbjct: 171 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 230
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R D +T+VS++S+ ++ GR VHS +GF ++ ++N LI +Y KCG++++A
Sbjct: 231 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 290
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF+G+ + +SW +I GY EAL LF M +GE P+ VT+LS++ C G
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 350
Query: 360 ALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
A+E+G+W Y G+ + +LIDMY+KCG I A+++F ++ + + SW M
Sbjct: 351 AIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAM 410
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I G A++G A D+F ++ + ++ P+ +TF+ +L AC+H+G L+ G I +D
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYK 470
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I+ P+L+HY CM DLLG G KEA + + +M ++ D IW +LL ACK++ N+E+GE
Sbjct: 471 IT--PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGES 528
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A L K+EP + YV ++N YA GRW+ VA IR ++ +KK PG S I+
Sbjct: 529 YAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 588
Query: 598 TFTAEDRYHAESELTY 613
F D++H + Y
Sbjct: 589 EFIIGDKFHPRNREIY 604
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 216/457 (47%), Gaps = 63/457 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R ++ L L+ M + PN TFPF+ K+CAK Q IHGH++
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 130
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMA------------------------- 102
K S +V+ RL+ A K+FD+ +
Sbjct: 131 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 190
Query: 103 ------VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
++DV SWNAM+ G+A+ G + L LF M ++ D T++ + A +
Sbjct: 191 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 250
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
+ L + VHS+ G +++ + N I Y KC +++ A CG+ E L + V+SWN+
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA----CGLFEGLSYKDVISWNT 306
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIH 272
++ G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H +
Sbjct: 307 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRL 366
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G S +LI MY+KCGDI++A+ +FD I +R+ SW AMI G+A G + A +
Sbjct: 367 KGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDI 426
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALI 387
F M PD +T + ++S C SG L+LG+ ++Y + L+ +I
Sbjct: 427 FSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHY----GCMI 482
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCAL 423
D+ G +A E+ + E V W +++ C +
Sbjct: 483 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 519
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 129/303 (42%), Gaps = 39/303 (12%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS---ARVLFDGICDRTRVSWTAMISGY 320
R++H+ I G ++ LI D A +F+ I + + W M G+
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
A D AL L+ M + G LP+ T ++ C +S A G+ + G ++
Sbjct: 79 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 138
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT------------------------ 416
V +LI MY + G + DAR++F + VVS+T
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198
Query: 417 -------MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
MI+G A G EAL+LF ++M+ ++RP+ T ++V+ AC + +E G +
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
DD G N L + + DL + G+++ A + + K D W TL+ H
Sbjct: 259 -SWIDDHGFGSN--LKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLI-GGYTH 313
Query: 530 LNI 532
+N+
Sbjct: 314 MNL 316
>gi|42563517|ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g05340
gi|332640702|gb|AEE74223.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 658
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 287/553 (51%), Gaps = 5/553 (0%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + KC +L A K+FDEM +RDV S N + GF + E+ L M G D
Sbjct: 98 SLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHA 156
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + + + K +H+ I G D ++SV N I+SY KC VF G+
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM 216
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R V++ ++++G + +D L + M + T +S L++ + +V+
Sbjct: 217 SHR--NVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVE 274
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H+ YG + ++ + + L+ MYSKCG I+ A +F+ + VS T ++ G AQ
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +EA++ F M AG D V +++ +L LGK + N V
Sbjct: 335 NGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV 394
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N LI+MYSKCG + D++ +F +P++ VSW +MIA A +G + AL L+ ++ L++
Sbjct: 395 NNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV 454
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+P VTFL++L AC+H G ++KG + + GI P +HY+C+ D+LGR G LKE
Sbjct: 455 KPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI--EPRTEHYTCIIDMLGRAGLLKE 512
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A F+ S+P+K D IW LL AC H + E+GEY A LF+ P S++ ++ +AN Y+
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSS 572
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
G+W A MK V K G S I KT +F ED+ H ++E Y VL L
Sbjct: 573 RGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPV 632
Query: 623 SREEAYSSHLKWI 635
+E Y ++I
Sbjct: 633 MVDEGYRPDKRFI 645
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 19/313 (6%)
Query: 32 KNEAHKT-LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-------- 82
+NE H+ L LF M++ + PN++T+ AC+ ++ Q IH + K
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 83 ------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
+ KC ++ A+ IF+ D S +LVG AQ G E ++ F M G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ D V + + L L K +HS I + V N I+ Y+KC DL ++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
VF + + R VSWNSM+A +L Y M + T +SLL +
Sbjct: 413 TVFRRMPK--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSH 470
Query: 257 PEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WT 314
+ +GR L++ +G + +I M + G + A+ D + + W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 315 AMISGYAQKGDLD 327
A++ + GD +
Sbjct: 531 ALLGACSFHGDTE 543
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 195/630 (30%), Positives = 309/630 (49%), Gaps = 40/630 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V N L F++M++ + + + + ++CA LS+L +H H +
Sbjct: 207 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 266
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KCD + A +FD+ + S+NAM+ G++Q L
Sbjct: 267 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALL 326
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ + G+ D +++ G+ +A K LS ++ I + DV V N I Y
Sbjct: 327 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYG 386
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A VF E R R VSWN+++A K ++L + M+ + D T
Sbjct: 387 KCQALAEAFRVF--DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 444
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +L G +HS + G + SV +LI MYSKCG I+ A +
Sbjct: 445 GSVLKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 503
Query: 308 RTRVS--------------------WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
RT VS W ++ISGY K ++A LF M G PD T
Sbjct: 504 RTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 563
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+++ C + LGK L+ +V + + L+DMYSKCG + D+R +F
Sbjct: 564 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSL 623
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ V+W MI G A +G+ EA+ LF +++ +++PN VTF+++L+AC H G ++KG
Sbjct: 624 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 683
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ D G+ +P+L HYS M D+LG+ GK+K AL+ ++ MP ++D IW TLL C
Sbjct: 684 YFYMMKRDYGL--DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 741
Query: 528 IHL-NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
IH N+E+ E L +L+P ++ Y ++N YA G W+ V+++R M+ ++KK PG
Sbjct: 742 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 801
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVL 616
S + + F D+ H E Y L
Sbjct: 802 CSWVELKDELHVFLVGDKAHPRWEEIYEEL 831
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 215/440 (48%), Gaps = 17/440 (3%)
Query: 67 LSDLI-YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
L D++ +++MI+G+ + VK A F+ M VRDV SWN+ML G+ Q G
Sbjct: 69 LRDVVSWNKMINGYAKSNNMVK------ASFFFNMMPVRDVVSWNSMLSGYLQNGETLKS 122
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ +F +M G + D T + + + SL +H + +G D DV + +
Sbjct: 123 IEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDM 182
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAK + VF GI E+ VSW++++AGC + +L F++ M + +
Sbjct: 183 YAKGKRFVESLRVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 240
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
S+L S L G +H+H + F D V + MY+KC ++ A++LFD
Sbjct: 241 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKS 300
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ R S+ AMI+GY+Q+ +AL LF + ++G D +++ + C L G
Sbjct: 301 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 360
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ A L +V V NA IDMY KC ++ +A +F + + VSW +IA NG
Sbjct: 361 QIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 420
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPE 483
+ E L LF ++ + P+ TF +VL+ACT G L G I SI++ G++ N
Sbjct: 421 KGYETLFLFVSMLRSRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSIVK---SGMASNSS 476
Query: 484 LDHYSCMADLLGRKGKLKEA 503
+ + D+ + G ++EA
Sbjct: 477 VG--CSLIDMYSKCGMIEEA 494
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 239/545 (43%), Gaps = 47/545 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + E K++ +F M + E + TF I K C+ L D IHG +V
Sbjct: 106 WNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVV 165
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K R + ++F + ++ SW+A++ G Q L L+
Sbjct: 166 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 225
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M+ V + ++ L L +H+ + AD V + YA
Sbjct: 226 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 285
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KCD+++ A+++F E R S+N+M+ G + + +L + +M +G D ++
Sbjct: 286 KCDNMQDAQILFDKSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ + + L +G ++ I LDV V N I MY KC + A +FD +
Sbjct: 344 SGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 403
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ + Q G E L LF +M + PD T S++ C G+L G
Sbjct: 404 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKAC-TGGSLGYGMEI 462
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL---FYALP----------------- 407
+ G+ N V +LIDMYSKCG I +A ++ F+
Sbjct: 463 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRL 522
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH--TGFLEKG 465
+++ VSW ++I+G + + +A LF ++ME+ + P++ T+ VL C + + L K
Sbjct: 523 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 582
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLC 524
+I+ + + Y S + D+ + G L ++ L F +S ++ D W ++C
Sbjct: 583 IHAQVIKKELQSDVYIS-----STLVDMYSKCGDLHDSRLMFEKS--LRRDFVTWNAMIC 635
Query: 525 ACKIH 529
H
Sbjct: 636 GYAHH 640
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 39/242 (16%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL G+ H+H I GF V+N L+ +Y+ D SA ++FD + R VSW MI+
Sbjct: 21 ALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMIN 80
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG----ALEL-------GKWF 367
GYA+ ++ +A FF M + D+V+ SM+SG Q+G ++E+ G F
Sbjct: 81 GYAKSNNMVKA-SFFFNMMP---VRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEF 136
Query: 368 DNYA-------CSG-----------------GLKDNVMVCNALIDMYSKCGSIGDARELF 403
D CS G +V+ +AL+DMY+K ++ +F
Sbjct: 137 DGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 196
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+PEK VSW+ +IAGC N AL F ++ +++ ++ + +VL++C L
Sbjct: 197 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 256
Query: 464 KG 465
G
Sbjct: 257 LG 258
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 35/203 (17%)
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNAL---------------------------- 386
C + GALELGK + G + V N L
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 387 ---IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
I+ Y+K ++ A F +P + VVSW +M++G NGE ++++++F +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
+ TF +L+ C+ G I + + + ++ S + D+ + + E+
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVR---VGCDTDVVAASALLDMYAKGKRFVES 192
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
L Q +P K+ W ++ C
Sbjct: 193 LRVFQGIPEKNSVS-WSAIIAGC 214
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 313/619 (50%), Gaps = 27/619 (4%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+ L +R+M + P+ F C+ DL Q++H I+++
Sbjct: 41 EALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTAL 100
Query: 85 ---FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM---RLVGIQ 138
+ +C L+ A K FDEM + + +WNA++ G+++ G L+++ +M G++
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D +T A +S + + + + G +D V N I+ Y+KC L+ A V
Sbjct: 161 PDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F ++ R V++WN+M++G +L ++ M N + +V T + LL++ E
Sbjct: 221 FDRLKNR--DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLE 278
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARVLFDGICDRTRVSWTAMI 317
L QGR +H +G++ D+ + N L++MY+KC ++ AR +F+ + R ++W +I
Sbjct: 279 DLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILI 338
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
Y Q G +AL +F M+ P+ +T+ +++S C GA GK SG K
Sbjct: 339 VAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCK 398
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V++ N+L++MY++CGS+ D +F A+ +K +VSW+T+IA A +G L+ F +L
Sbjct: 399 ADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWEL 458
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
++ L + VT ++ L AC+H G L++G + D G++ P+ H+ CM DLL R
Sbjct: 459 LQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLA--PDYRHFLCMVDLLSRA 516
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE-M 556
G+L+ A + + MP DA W +LL CK+H + + VA LF+LE V +
Sbjct: 517 GRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLL 576
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+N YA GRWD ++R R +K PG S IN F A D+ H E EL +
Sbjct: 577 SNVYAEAGRWD---DVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEI 633
Query: 617 DCLALHSREEAYSSHLKWI 635
L+ ++ Y ++ +
Sbjct: 634 KRLSKQMKDAGYVPDMRMV 652
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 227/459 (49%), Gaps = 17/459 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---F 141
+ KC + A +F + + SW ++ FA+ G L + M L G++ D F
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKMAELVFC 200
V +G+ ++ K LL H+ + ++ D+ + I+ YA+C DL++A F
Sbjct: 62 VVAIGVCSSSKDLKQGQLL---HAMILETQLLEFDIILGTALITMYARCRDLELARKTF- 117
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN---GFRLDVTTVVSLLSSFVCP 257
E +T+V+WN+++AG + +L Y+ M+ G + D T S L +
Sbjct: 118 -DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVV 176
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ QGR + + + G+ D V N LI+MYSKCG ++SAR +FD + +R ++W MI
Sbjct: 177 GDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SGYA++G +AL LF M P++VT + +++ C LE G+ G +
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYE 296
Query: 378 DNVMVCNALIDMYSKC-GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
++++ N L++MY+KC S+ +AR++F L + V++W +I G+ +ALD+F Q
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ ++ PN +T VL AC G +G A+ + + ++ + + ++ R
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGR---CKADVVLENSLMNMYNR 413
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
G L + + ++ KS W TL+ A H + G
Sbjct: 414 CGSLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTG 451
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY KCG + A +F I VSWT +++ +A+ G EAL + M G PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYAL 406
+ I C S L+ G+ L + ++++ ALI MY++C + AR+ F +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD---LRPNRVTFLAVLQACTHTGFLE 463
+K +V+W +IAG + NG+ AL ++ ++ ++P+ +TF + L AC+ G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 464 KGWAI 468
+G I
Sbjct: 181 QGREI 185
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R+ + WN I V +A L +F+QM+ ++ PN +T + ACA L +
Sbjct: 327 RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGK 386
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H I + +C LD +F + + + SW+ ++ +AQ G
Sbjct: 387 AVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----GIHIGVDADV 176
L F+ + G+ AD VT++ A H L + V SF G H G+ D
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK--EGVQSFLSMVGDH-GLAPDY 503
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ ++ L+ AE + + L V+W S+++GC
Sbjct: 504 RHFLCMVDLLSRAGRLEAAENLIHDM-PFLPDAVAWTSLLSGC 545
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 270/492 (54%), Gaps = 14/492 (2%)
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGV-----DADVSVCNTWISSYAKCDDLKMAELVF 199
+ L Q +KH LK +H+F I GV D + T +S A + A VF
Sbjct: 21 ISLLQFCASSKHK--LKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAP---MSYAYNVF 75
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
I V +WN+++ G D + FYR M+ + D T LL +
Sbjct: 76 TVIHNP--NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLN 133
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+ +G +HS I GF+ V V N+L+ +Y+ CGD +SA +F+ + +R V+W +MI+G
Sbjct: 134 VREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMING 193
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+A G +EAL LF M G PD TV+S++S + GALELG+ Y GL N
Sbjct: 194 FALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKN 253
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V N+L+D+Y+KCG+I +A+ +F + E+ VSWT++I G A+NG EAL+LF ++
Sbjct: 254 SHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEG 313
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
L P+ +TF+ VL AC+H G L++G+ ++ GI P ++HY CM DLL R G
Sbjct: 314 QGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGII--PRIEHYGCMVDLLSRAGL 371
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
+K+A +++Q+MP++ +A IW TLL AC IH ++ +GE L LEP + YV ++N
Sbjct: 372 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNL 431
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
YA RW V IR M ++ VKK PG SL + + FT DR H +S+ Y +L+ +
Sbjct: 432 YASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKI 491
Query: 620 ALHSREEAYSSH 631
+ E Y H
Sbjct: 492 TELLKLEGYVPH 503
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 170/336 (50%), Gaps = 4/336 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
AY +F + +V +WN ++ G+A+ + M + ++ D T L +A
Sbjct: 71 AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISK 130
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ ++ +++HS I G ++ V V N+ + YA C D + A VF ++E R +V+WN
Sbjct: 131 SLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKE--RDLVAWN 188
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
SM+ G + +++L +R M G D TVVSLLS+ AL GR VH + +
Sbjct: 189 SMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKV 248
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G + V N+L+ +Y+KCG I A+ +F + +R VSWT++I G A G +EAL LF
Sbjct: 249 GLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELF 308
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSK 392
ME G +P +T + ++ C G L+ G ++F G+ + ++D+ S+
Sbjct: 309 KEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSR 368
Query: 393 CGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEF 427
G + A E +P + V W T++ C ++G
Sbjct: 369 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL 404
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ + + WN+ IR + L +RQM + +EP+ T+PF+ KA +K ++
Sbjct: 77 VIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVRE 136
Query: 73 SQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ IH +++ F C + AYK+F+ M RD+ +WN+M+ GFA
Sbjct: 137 GEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFAL 196
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G L LF M + G++ D TV+ L A+ L L + VH + + +G+ + V
Sbjct: 197 NGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHV 256
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N+ + YAKC ++ A+ VF + E R VSW S++ G +++L ++ M
Sbjct: 257 TNSLLDLYAKCGAIREAQRVFSEMSE--RNAVSWTSLIVGLAVNGFGEEALELFKEMEGQ 314
Query: 239 GFRLDVTTVVSLL 251
G T V +L
Sbjct: 315 GLVPSEITFVGVL 327
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ L LFR+M +EP+ T + A A+L L + +H +++
Sbjct: 187 WNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLL 246
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC + A ++F EM+ R+ SW +++VG A GF E L
Sbjct: 247 KVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALE 306
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIH 153
LF M G+ +T +G+ A H
Sbjct: 307 LFKEMEGQGLVPSEITFVGVLYACSH 332
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 237/419 (56%), Gaps = 2/419 (0%)
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWNS++ GC +D+L+F++ M ++D T+ S+L+SF + + VH
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I GF+ V N LI MY+K G +D A ++F + D+ VSWT++++GY+ G +EA
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
++LF M +G PD + V S++S C + ++ G+ GL+ ++ V N+L+ M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y+KCGSI DA F +P + V+SWT +I G A NG +L + Q++ +P+ +TF
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+ +L AC+H G L G A + DK P +HY+CM DLLGR GKL EA +
Sbjct: 247 IGLLFACSHNGLLGSGRA--YFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
M + DA +W LL AC++H +E+GE A LF+LEP ++ PYV ++N Y+ G+W+
Sbjct: 305 MVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDA 364
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
A IR +M+ + K PG S N K TF +EDR H Y +D + + +E Y
Sbjct: 365 ARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGY 423
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 168/333 (50%), Gaps = 12/333 (3%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M D SWN++++G + GF E+ L F MR ++ D T+ + + K +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
SVH I G +A V N I YAK L A +VF + ++ VVSW S+V G +
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDK--DVVSWTSLVTGYS 118
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ--GRLVHSHGIHYGFDLD 278
+ +++++ + M +G D V S+LS+ C E V G+ +H+ + G +
Sbjct: 119 HNGSYEEAIKLFCKMRISGVYPDQIAVASVLSA--CAELTVMDFGQQIHATLVKSGLESS 176
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+SV N+L++MY+KCG I A FD + R +SWTA+I GYAQ G +L+ + M A
Sbjct: 177 LSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIA 236
Query: 339 AGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G PD +T + ++ C +G L G+ +F+ G+K +ID+ + G +
Sbjct: 237 TGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLA 296
Query: 398 DARELFYAL---PEKIVVSWTTMIAGCALNGEF 427
+A+ L + P+ +V W ++A C ++ E
Sbjct: 297 EAKGLLNQMVVAPDAVV--WKALLAACRVHKEL 327
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 158/357 (44%), Gaps = 26/357 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I V + L F++M+ D++ + T P + + A + + + +H I+
Sbjct: 9 WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLII 68
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F K +LDCA +F +M +DV SW +++ G++ G E ++
Sbjct: 69 KTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIK 128
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF MR+ G+ D + V + A + + +H+ + G+++ +SV N+ ++ YA
Sbjct: 129 LFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYA 188
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A F + R V+SW +++ G + SL FY M+ G + D T
Sbjct: 189 KCGSIVDANRAFDNMPT--RDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246
Query: 248 VSLLSSFVCPEA--LVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ LL F C L GR + YG +I + + G + A+ L +
Sbjct: 247 IGLL--FACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304
Query: 305 -ICDRTRVSWTAMISGYAQKGDL---DEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
+ V W A+++ +L + A + F +E +P V + +M S G+
Sbjct: 305 MVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMP-YVMLSNMYSAAGK 360
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 292/561 (52%), Gaps = 35/561 (6%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +F+ + ++ WN M G A + L+L+ M +G+ + T L
Sbjct: 82 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 141
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--- 205
++ +K + +H + +G D D+ V + IS Y + L+ A VF R
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVV 201
Query: 206 --------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
++ VVSWN+M++G + ++L ++ MM
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN 261
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R D +T+V+++S+ ++ GR VHS +GF ++ ++N+L+ +YSKCG++++A
Sbjct: 262 IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETAC 321
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF+G+ + +SW +I GY EAL LF M +GE P+ VT+LS++ C G
Sbjct: 322 GLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLG 381
Query: 360 ALELGKWFDNYACSGGLKDNVMVCN---ALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
A+++G+W Y LK + +LIDMY+KCG I A ++F ++ K + SW
Sbjct: 382 AIDIGRWIHVY-IDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
MI G A++G A D+F ++ ++ + P+ +TF+ +L AC+ +G L+ G I D
Sbjct: 441 MIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDY 500
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
I+ P+L+HY CM DLLG G KEA + + +M ++ D IW +LL ACKI N+E+GE
Sbjct: 501 KIT--PKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGE 558
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A L K+EP + YV ++N YA GRW+ VA IR ++ +KK PG S I+
Sbjct: 559 SFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 597 CTFTAEDRYHAESELTYPVLD 617
F D++H + Y +L+
Sbjct: 619 HEFIIGDKFHPRNREIYGMLE 639
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 224/466 (48%), Gaps = 56/466 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R ++ L L+ M + PN+ TFPF+ K+CAK Q IHGH++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 161
Query: 82 K--------------SPFVKCDRL-------------------------------DCAYK 96
K S +V+ RL + A K
Sbjct: 162 KLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQK 221
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FDE+ V+DV SWNAM+ G+A+ G + L LF M I+ D T++ + A +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGS 281
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
+ L + VHS+ G +++ + N+ + Y+KC +L+ A CG+ E L + V+SWN+
Sbjct: 282 IELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETA----CGLFEGLLYKDVISWNT 337
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH-GIHY 273
++ G T+ + + ++L ++ M+ +G R + T++S+L + A+ GR +H +
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 274 GFDLDVSVINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
+ S + T LI MY+KCGDI++A +F+ I ++ SW AMI G+A G D A +
Sbjct: 398 KSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDI 457
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYS 391
F M G PD +T + ++S C +SG L+LG+ F + + +ID+
Sbjct: 458 FSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLG 517
Query: 392 KCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
G +A E+ + E V W +++ C + G VE + F Q
Sbjct: 518 HSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGN-VELGESFAQ 562
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 39/303 (12%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS---ARVLFDGICDRTRVSWTAMISGY 320
RL+H+ I G ++ L+ + D A +F+ I + + W M G+
Sbjct: 50 RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
A D AL+L+ M + G LP+ T ++ C +S A + G+ + G ++
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT------------------------ 416
V +LI +Y + G + DAR++F P + VVS+T
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229
Query: 417 -------MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
MI+G A G + EAL+LF ++M+ ++RP+ T + V+ AC +G +E G +
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
DD G N L + + DL + G+L+ A + + K D W TL+ H
Sbjct: 290 -SWIDDHGFGSN--LKIVNSLMDLYSKCGELETACGLFEGLLYK-DVISWNTLI-GGYTH 344
Query: 530 LNI 532
+N+
Sbjct: 345 MNL 347
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 296/560 (52%), Gaps = 37/560 (6%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D A +FD + ++ WN M G A + L+L+ M +G+ D T L
Sbjct: 37 DGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLL 96
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--------- 199
++ +K + +H + +G D D+ V + IS YA+ L+ A VF
Sbjct: 97 KSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVV 156
Query: 200 ------CGIEERL--------------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-N 238
G R + VVSWN+M++G + ++L ++ MM
Sbjct: 157 SYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMT 216
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
R D +T+V+++S+ +++ GR VHS +GF ++ ++N LI +YSK G++++A
Sbjct: 217 NVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETA 276
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
LFDG+ ++ +SW +I GY EAL LF M +GE P+ VT+LS++ C
Sbjct: 277 CELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 336
Query: 359 GALELGKW---FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKIVVSW 414
GA+++G+W + N G + + + +LIDMY+KCG I A+++F ++ + + +W
Sbjct: 337 GAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTW 396
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
MI+G A++G A D+F ++ + P+ +TF+ +L AC+H+G L+ G +I +
Sbjct: 397 NAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGR--NIFRSM 454
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+G P+L+HY CM DLLG G KEA + + +MP++ D IW +LL ACKIH N+E+
Sbjct: 455 TRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLEL 514
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK-RNQVKKFPGQSLFHIN 593
GE A L K+EP ++ YV ++N YA GRW+ VA IR ++ + KK PG S I+
Sbjct: 515 GESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEID 574
Query: 594 GKTCTFTAEDRYHAESELTY 613
F D+ H ++ Y
Sbjct: 575 SVVHEFIIGDKLHPQNREIY 594
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 226/472 (47%), Gaps = 54/472 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R ++ L L+ M + P++ TFPF+ K+CAK Q IHGH++
Sbjct: 57 WNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVL 116
Query: 82 K---------------------------------------------SPFVKCDRLDCAYK 96
K + +V ++ A K
Sbjct: 117 KLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQK 176
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAK 155
+FDE+ +DV SWNAM+ G+ + G + L LF M ++ ++ D T++ + A +
Sbjct: 177 LFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSD 236
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ L + VHS+ G +++ + N I Y+K +++ A +F G+ + V+SWN++
Sbjct: 237 SIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWN--KDVISWNTL 294
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIHY 273
+ G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H +
Sbjct: 295 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLK 354
Query: 274 GFDLDVSVINT-LISMYSKCGDIDSARVLFD-GICDRTRVSWTAMISGYAQKGDLDEALR 331
G +VS + T LI MY+KCGDID+A+ +FD + +R+ +W AMISG+A G + A
Sbjct: 355 GVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFD 414
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMY 390
+F M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 415 IFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLL 474
Query: 391 SKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
G +A E+ +P E V W +++ C ++G +L++++
Sbjct: 475 GHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE 526
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 302/629 (48%), Gaps = 33/629 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WN+ I + L LF++M+ + P +T CA + +Q IH
Sbjct: 196 WNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVR 252
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ S + + L A ++FD A RDV SWNAML +AQ G +
Sbjct: 253 ESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAAL 312
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI VT L A+ L + +H + G+D D+ + N + Y
Sbjct: 313 LFARMLHEGISPSKVT---LVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYT 369
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C + A +F I VSWN+M+AG + + ++ ++ M G T
Sbjct: 370 RCGSPEEARHLFKRIPC---NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATY 426
Query: 248 VSLLSSFVC-PE---ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
++LL + PE A+ +GR +HS + G+ + ++ ++ MY+ CG ID A F
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486
Query: 304 GICDRTR---VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
R VSW A+IS +Q G AL F M+ G P+ +T ++++ C + A
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAA 546
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
L G+ ++ G++ N+ V AL MY +CGS+ ARE+F + E+ VV + MIA
Sbjct: 547 LTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIA 606
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
+ NG EAL LF ++ + RP+ +F++VL AC+H G ++GW I GI+
Sbjct: 607 AYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIA 666
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P DHY+C D+LGR G L +A + ++ M +K +W TLL AC+ + +++ G
Sbjct: 667 --PSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLAN 724
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
+ +L+P + YV ++N A G+WD A +RT M+ ++K G+S I + F
Sbjct: 725 SMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEF 784
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAY 628
A DR H SE Y L+ L RE Y
Sbjct: 785 VAGDRSHPRSEEIYRELERLHAEIREIGY 813
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 252/527 (47%), Gaps = 38/527 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I +A + + +F +M+Q + + +TF + KACA+L DL + IH IV
Sbjct: 96 WTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIV 155
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + C + A +F++M RD+ SWNA + AQ G L L
Sbjct: 156 ESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALE 214
Query: 128 LFYNMRLVGIQADFVT-VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M+L G++ +T V+ LT A + +++H G++ + V S+Y
Sbjct: 215 LFQRMQLEGVRPARITLVIALTVCAT----IRQAQAIHFIVRESGLEQTLVVSTALASAY 270
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+ L A+ VF E R VVSWN+M+ ++ + M++ G T
Sbjct: 271 ARLGHLYQAKEVFDRAAE--RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI- 305
+V+ +S C +L GR++H + G D D+ + N L+ MY++CG + AR LF I
Sbjct: 329 LVN--ASTGCS-SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP 385
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG----QSGAL 361
C+ VSW MI+G +QKG + A+ LF M+ G P T L+++ ++ A+
Sbjct: 386 CN--AVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY--ALPEK-IVVSWTTMI 418
G+ + S G + A++ MY+ CG+I +A F A+ ++ VVSW +I
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAII 503
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+ + +G AL F ++ + PN++T +AVL AC L +G I+ +
Sbjct: 504 SSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG---EIVHDHLRHS 560
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
L + +A + GR G L+ A + + + ++ D I+ ++ A
Sbjct: 561 GMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 201/391 (51%), Gaps = 11/391 (2%)
Query: 65 AKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
A++ L + + H+++ ++KC+ L ++F + VRD ASW ++ + + G +
Sbjct: 53 ARIVSLGLEEELGNHLLR-LYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKR 111
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ +F+ M+ G++ D VT + + +A LS +S+H++ + G+ + N +
Sbjct: 112 AIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLH 171
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y C + A L+F +E R +VSWN+ +A +L ++ M G R
Sbjct: 172 IYGSCGCVASAMLLFEKME---RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPAR 228
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+V L+ VC + Q + +H G + + V L S Y++ G + A+ +FD
Sbjct: 229 ITLVIALT--VCA-TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDR 285
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+R VSW AM+ YAQ G + EA LF M G P VT+++ +GC +L G
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC---SSLRFG 342
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ A GL ++++ NAL+DMY++CGS +AR LF +P VSW TMIAG +
Sbjct: 343 RMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCN-AVSWNTMIAGSSQK 401
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
G+ A++LF ++ + P R T+L +L+A
Sbjct: 402 GQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+V LL + L QGR +H+ + G + ++ N L+ +Y KC + +F +
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLE 89
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R SWT +I+ Y + G A+ +F M+ G D VT L+++ C + G L G+
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ GLK ++ N L+ +Y CG + A LF + E+ +VSW IA A +G+
Sbjct: 150 IHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGD 208
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
AL+LF ++ +RP R+T + L C
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVCA 239
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 191/614 (31%), Positives = 299/614 (48%), Gaps = 19/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I +N + + R M+ E + TF + K A Q +H I+
Sbjct: 67 WNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC++L+ AY F ++ + SWNAM+ G+AQ G E
Sbjct: 127 KMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFW 186
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G + D T L A +L +H I G++ ++CN I+SY+
Sbjct: 187 LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYS 246
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A+ +F +R +V+WNS++A + D + M +GF D+ +
Sbjct: 247 KCGSLDDAKRIF-DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSY 305
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARVLFDGI 305
S++S+ GR +H I GF+ V + N LISMY K G + A +F+ +
Sbjct: 306 TSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESL 365
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ RVSW ++++G +Q G ++A++ F M +A D + +++ C +LG+
Sbjct: 366 EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQ 425
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
A GL+ N V ++LI MYSKCG I DAR F + ++W ++ G A +G
Sbjct: 426 QIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHG 485
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ ALDLF + E ++ + +TF+AVL AC+H G +E+G D G+ P ++
Sbjct: 486 QCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVP--PRME 543
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C DL GR G+L+EA ++ MP K D +W T L AC+ NIE+ VA L ++
Sbjct: 544 HYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEM 603
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP YV ++N Y RWD A ++ +MK VKK PG S +N F A+D
Sbjct: 604 EPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHS 663
Query: 606 HAESELTYPVLDCL 619
H + Y +L+ L
Sbjct: 664 HPSCQQIYFLLEVL 677
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 182/392 (46%), Gaps = 9/392 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC L A +FDEM +RD SWN M+ G G LE + MR G + D T
Sbjct: 43 YWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTF 102
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + A L + VHS I +G +V + + YAKC+ L+ A L F I +
Sbjct: 103 GSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISK 162
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
VSWN+M+ G + + M G ++D T LL +
Sbjct: 163 --HNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTS 220
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD---GICDRTRVSWTAMISGYA 321
+H I +G +L ++ N LI+ YSKCG +D A+ +FD GI R V+W ++++ Y
Sbjct: 221 QLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGI--RDLVTWNSLLAAYL 278
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ D A +L M+ G PDL + S+IS C G+ G + +V
Sbjct: 279 LRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVP 338
Query: 382 VCNALIDMYSKC--GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ NALI MY K GS+ +A +F +L K VSW +++ G + G +A+ F +
Sbjct: 339 ISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRS 398
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
+ + +F AVL++C+ + G I ++
Sbjct: 399 AAMDIDHYSFSAVLRSCSDLATFQLGQQIHVL 430
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 172/363 (47%), Gaps = 9/363 (2%)
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
HS + +G ADV CN ++ Y KC +L+ A+++F E +R VSWN+M+AG
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLF--DEMPMRDSVSWNTMIAGHINCG 78
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
+ S + R M GF LD T S+L G+ VHS I G+ +V +
Sbjct: 79 NLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MY+KC ++ A + F I VSW AMI+GYAQ GD + A L ME GE
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T ++ + L GL+ +CNALI YSKCGS+ DA+ +F
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 404 YALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
+ + +V+W +++A L + A L + E P+ ++ +++ AC +
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318
Query: 463 EKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
G ++ +I+ +G + + + L G +KEAL +S+ K D W
Sbjct: 319 NNGRSLHGLVIK---RGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFK-DRVSWN 374
Query: 521 TLL 523
++L
Sbjct: 375 SIL 377
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 118/269 (43%), Gaps = 7/269 (2%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL L HS + G DV N +++ Y KC ++ SA VLFD + R VSW MI+
Sbjct: 13 ALANLLLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIA 72
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
G+ G+L+ + + M + G D T SM+ G +G LG+ + G +
Sbjct: 73 GHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAE 132
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
NV +AL+DMY+KC + DA F ++ + VSW MI G A G+ A L +
Sbjct: 133 NVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCME 192
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL--GR 496
+ + + T+ +L F Q K I + EL + C A + +
Sbjct: 193 QEGEKVDDGTYAPLLPLLDDADFCNL-----TSQLHGKIIKHGLELVNTMCNALITSYSK 247
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
G L +A S D W +LL A
Sbjct: 248 CGSLDDAKRIFDSSAGIRDLVTWNSLLAA 276
>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 726
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 190/601 (31%), Positives = 322/601 (53%), Gaps = 28/601 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL-SDLIYSQMIHGHI 80
WN +R ++ + LLL+++M+++ ++ + TFP I +A L SD++ +M+H
Sbjct: 96 WNLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDA 155
Query: 81 VKSPF----VKCD-------RLDCAYK---IFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+K F C+ R C Y +FDEM+ RD+ SW +M+ G+ G + +
Sbjct: 156 MKLGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAF 215
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF MRL ++ + VT++ + + + S + +H + I G+ SV N+ + Y
Sbjct: 216 ELFNKMRL-EMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMY 274
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVT 245
+ K E +F +E R V+SWN+++ GD + F + M L
Sbjct: 275 SITGSAKEVESLF--VEIYRRDVISWNTLIGFYALRGDAEEMVCGF--NQMRGEVALSSE 330
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ ++S F LV+G +HS I G DV ++ +L+ Y+KCG++ ++ LF I
Sbjct: 331 TLTLVISVFAKIGNLVEGEKLHSFSIKVGLCDDV-LLASLLDFYAKCGELRNSVQLFGEI 389
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R+ +W M+SG Q G DEA+ LF M+A+G + S++ C G+L+L K
Sbjct: 390 PCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCK 449
Query: 366 WFDNYACSGGL----KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
Y DN+ + ++++MY +CGSI ARE F + K ++WT+MI G
Sbjct: 450 EIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGY 509
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
++G +EAL LF+Q++ + PNRVTFL++L AC+H+G + +G + + G+
Sbjct: 510 GIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGM--E 567
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P+LDHY+CM DLLGR GK+KEAL + M + +D+ IWG L+ +C++H + ++GE+ A
Sbjct: 568 PDLDHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQR 627
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L ++E + Y ++N A+ G+WD V +R ++ ++K PG S G+ F +
Sbjct: 628 LLEMESDNVGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCIVGKGRNYCFIS 687
Query: 602 E 602
E
Sbjct: 688 E 688
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 184/380 (48%), Gaps = 22/380 (5%)
Query: 155 KHLSLLKSVH-SFGIHIGVDADVSVCNT-WISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
K L LK +H S + G + +S +T IS Y+K +DL+ A VF ++E +SW
Sbjct: 39 KDLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQE--PNTLSW 96
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA-LVQGRLVHSHGI 271
N ++ ++L Y+ M +G + D T ++ + + ++ ++ G++VH +
Sbjct: 97 NLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAM 156
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
GF D+ NT+I +Y++CG + RV+FD + R VSWT+MISGY +G++ A
Sbjct: 157 KLGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFE 216
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
LF M E P+ VT++ M+ GC G+ Y GL V N+++ MYS
Sbjct: 217 LFNKMRLEME-PNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYS 275
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
GS + LF + + V+SW T+I AL G+ E + F+Q M ++ + T
Sbjct: 276 ITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQ-MRGEVALSSETLTL 334
Query: 452 VLQACTHTGFLEKG-----WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
V+ G L +G ++I + DD + + + D + G+L+ ++
Sbjct: 335 VISVFAKIGNLVEGEKLHSFSIKVGLCDDVLL---------ASLLDFYAKCGELRNSVQL 385
Query: 507 VQSMPIKSDAGIWGTLLCAC 526
+P +S + W ++ C
Sbjct: 386 FGEIPCRSSS-TWKLMMSGC 404
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 287/556 (51%), Gaps = 33/556 (5%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +FD + ++ WN M G A + L L+ M +G+ + T L
Sbjct: 51 DGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLL 110
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--- 205
+A +K + +H + +G D D+ V + I+ Y K + A VF R
Sbjct: 111 KACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVV 170
Query: 206 --------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
++ VVSWN++++G + ++L ++ MM
Sbjct: 171 SYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN 230
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D +T+V++LS+ ++ GR VHS +GF ++ ++N LI +Y KCG++++A
Sbjct: 231 VKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAS 290
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF+G+ + +SW +I GY EAL LF M +GE P+ VT+LS++ C G
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG 350
Query: 360 ALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
A+++G+W Y G+ + + +LIDMY+KCG I A+++F ++ + + SW M
Sbjct: 351 AIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I G A++G A D+F ++ + + P+ +TF+ +L AC+H+G L+ G I +D
Sbjct: 411 IFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYK 470
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I+ P+L+HY CM DLLG G KEA + + SM + D IW +LL ACK+H N+E+GE
Sbjct: 471 IT--PKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGES 528
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A L K+EP ++ YV ++N YA GRW+ VA R ++ +KK PG S I+
Sbjct: 529 FAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVH 588
Query: 598 TFTAEDRYHAESELTY 613
F D+ H + Y
Sbjct: 589 EFIIGDKLHPRNREIY 604
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 225/466 (48%), Gaps = 56/466 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R ++ L L+ M + PN+ TFPF+ KACAK Q IHGH++
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVL 130
Query: 82 K--------------SPFVKCDRLD-------------------------------CAYK 96
K + +VK R + A K
Sbjct: 131 KLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQK 190
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FDE+ V+DV SWNA++ G+A+ G + L LF M ++ D T++ + A +
Sbjct: 191 MFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSAS 250
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L + VHS+ G +++ + N I Y KC +++ A +F G+ + V+SWN+++
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLS--YKDVISWNTLI 308
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIHYG 274
G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H + G
Sbjct: 309 GGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 368
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
S+ +LI MY+KCGDI++A+ +FD + +R+ SW AMI G+A G + A +F
Sbjct: 369 VSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFS 428
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKC 393
M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 429 RMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHS 488
Query: 394 GSIGDARELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
G +A E+ ++ P+ ++ W +++ C ++G VE + F Q
Sbjct: 489 GLFKEAEEMINSMEMDPDGVI--WCSLLKACKMHGN-VELGESFAQ 531
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 39/303 (12%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS---ARVLFDGICDRTRVSWTAMISGY 320
R++H+ I G ++ LI D A +FD I + + W M G+
Sbjct: 19 RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
A D AL L+ M + G +P+ T ++ C +S A G+ + G ++
Sbjct: 79 ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN---------------- 424
V +LI MY K G DAR++F + VVS+T +I G A N
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198
Query: 425 ---------------GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
G + EAL+LF ++M+ +++P+ T + VL AC + +E G +
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
DD G N L + + DL + G+++ A + + K D W TL+ H
Sbjct: 259 -SWIDDHGFGSN--LKIVNALIDLYIKCGEVETASGLFEGLSYK-DVISWNTLI-GGYTH 313
Query: 530 LNI 532
+N+
Sbjct: 314 MNL 316
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 179/569 (31%), Positives = 298/569 (52%), Gaps = 33/569 (5%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A +F+ + ++ WN M G A + L+L+ M +G+ + T L ++
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF----------- 199
K +H + +G + D+ V + IS Y + + L+ A VF
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 200 ----CGIEER--------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
G R ++ VVSWN+M++G + ++L ++ MM R
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D +T+V+++S+ ++ GR VHS +GF ++ ++N LI YSKCG++++A L
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F G+ + +SW +I GY EAL LF M +GE P+ VT+LS++ C GA+
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 362 ELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
++G+W Y G+ + + +LIDMYSKCG I A ++F ++ K + +W MI
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A++G A D+F ++ + +++P+ +TF+ +L AC+H G L+ G I + I+
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P+L+HY CM DLLG G KEA + + +M ++ D IW +LL ACK+H N+E+GE A
Sbjct: 433 --PKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFA 490
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LFK+EP++ YV ++N YA GRW+ VA IR ++ +KK PG S I+ F
Sbjct: 491 QNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEF 550
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAY 628
D++H + Y +L+ + + +E +
Sbjct: 551 IIGDKFHPRNREIYGMLEEMEVLLQEAGF 579
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 226/477 (47%), Gaps = 61/477 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R + L L+ M + PN+ TFPF+ K+CAKL IHGH++
Sbjct: 31 WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVL 90
Query: 82 K--------------SPFVKCDRLDCAYKI------------------------------ 97
K S +V+ +RL+ A+K+
Sbjct: 91 KLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARN 150
Query: 98 -FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
FDE+ V+DV SWNAM+ G+ + G + L LF M ++ D T++ + A+ +
Sbjct: 151 MFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGS 210
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L + VHS+ G +++ + N I Y+KC +++ A +F G+ + V+SWN ++
Sbjct: 211 IELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLS--YKDVISWNILI 268
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIHYG 274
G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H + G
Sbjct: 269 GGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKG 328
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
S+ +LI MYSKCGDI++A +F+ + ++ +W AMI G+A G + A +F
Sbjct: 329 VTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFS 388
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDM 389
M PD +T + ++S C +G L+LG+ NY + L+ +ID+
Sbjct: 389 RMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEH----YGCMIDL 444
Query: 390 YSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
G +A E+ + E V W +++ C ++G VE + F Q + + PN
Sbjct: 445 LGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGN-VELGEKFAQNL-FKIEPN 499
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 172/372 (46%), Gaps = 37/372 (9%)
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
+ L A VF I+E ++ WN+M G +L Y M+ G + T
Sbjct: 11 EGLPYAISVFETIQEP--NLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPF 68
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL S +A +G +H H + G++LD+ V +LISMY + ++ A +FD R
Sbjct: 69 LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128
Query: 310 RVSWTAMISGYAQKGDLD-------------------------------EALRLFFAMEA 338
VS+TA+++GYA +G ++ EAL LF M
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
PD T++++IS +SG++ELG+ ++ G N+ + NALID YSKCG +
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A LF L K V+SW +I G + EAL LF +++ PN VT L++L AC H
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308
Query: 459 TGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
G ++ G W I KG++ L + + D+ + G ++ A SM KS
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLR--TSLIDMYSKCGDIEAAHQVFNSMLHKSLPA 366
Query: 518 IWGTLLCACKIH 529
W ++ +H
Sbjct: 367 -WNAMIFGFAMH 377
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 302/602 (50%), Gaps = 28/602 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE--PNNLTFPFIAKACAKLSDLIYSQ 74
S++ +N IR V H + +F +M I+ P+ T+PF+AKA +L +
Sbjct: 78 SSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGL 137
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+IHG I++S F + R++ A +FD M RDV SWN M+ G+ + G
Sbjct: 138 VIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNG 197
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
++ + L +F M G+ D T++ + H K L + ++VH + + V N
Sbjct: 198 YMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ Y KC + A VF +E R V++W M+ G +++L R M + G
Sbjct: 258 ALVNMYLKCGRMDEARFVFGRMERR--DVITWTCMINGYIEDGDVENALELCRLMQFEGV 315
Query: 241 RLDVTTVVSLLSSFVCPEALV--QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
R + T+ SL+S+ C +AL G+ +H I D+ + +LISMY+KC ID
Sbjct: 316 RPNAVTIASLVSA--CGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLC 373
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F G W+A+I+G Q + +AL LF M P++ T+ S++
Sbjct: 374 FRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATL 433
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK----IVVSW 414
L Y G ++ L+ +YSKCG++ A ++F + EK VV W
Sbjct: 434 ADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+I+G ++G+ AL +F +++ + PN +TF + L AC+H+G +E+G +++ +
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG--LTLFSFM 551
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+ +HY+C+ DLLGR G+L EA + + ++P + + IWG LL AC H N+++
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQL 611
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
GE A LF+LEP + YV +AN YA GRW + +R MM+ ++K PG S I
Sbjct: 612 GEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIRS 671
Query: 595 KT 596
+
Sbjct: 672 NS 673
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 224/478 (46%), Gaps = 13/478 (2%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKS---PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
I+K A +I + GHI+ + + C + A K+FDEM + S+N ++ +
Sbjct: 31 ISKTKALHCHVITGGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMY 90
Query: 117 AQMGFLENVLRLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ G + + +F M GI+ D T + +AA K +SL +H +
Sbjct: 91 VRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGM 150
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D V N ++ Y ++MA VF ++ R V+SWN+M++G +D+L +
Sbjct: 151 DKYVQNALLAMYMNFGRVEMARNVFDVMKNR--DVISWNTMISGYYRNGYMNDALMMFDW 208
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G D T+VS+L + L GR VH + V N L++MY KCG
Sbjct: 209 MVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D AR +F + R ++WT MI+GY + GD++ AL L M+ G P+ VT+ S++S
Sbjct: 269 MDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSA 328
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
CG + L GK +A + ++++ +LI MY+KC I +F W
Sbjct: 329 CGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPW 388
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+ +IAGC N +ALDLF ++ D+ PN T ++L A L + ++I Y
Sbjct: 389 SAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQ--TMNIHCYL 446
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEA---LDFVQSMPIKSDAGIWGTLLCACKIH 529
K + LD + + + + G L+ A + +Q D +WG L+ +H
Sbjct: 447 TK-TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 201/433 (46%), Gaps = 30/433 (6%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ ++ + WN+ I + L++F M ++P++ T + C L L
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEM 236
Query: 73 SQMIHGHI----------VKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ +H + VK+ V KC R+D A +F M RDV +W M+ G+ +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIE 296
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G +EN L L M+ G++ + VT+ L A A L+ K +H + I V +D+ +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIII 356
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ IS YAKC + + VF G W++++AGC + D+L+ ++ M
Sbjct: 357 ETSLISMYAKCKHIDLCFRVFSGASR--NHTGPWSAIIAGCVQNELVRDALDLFKRMRRE 414
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
++ T+ SLL ++ L Q +H + GF + L+ +YSKCG ++SA
Sbjct: 415 DVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 299 RVLFDGICDRTR----VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+F+GI ++ + V W A+ISGY GD AL++F M +G P+ +T S ++
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 355 CGQSGALELGK-----WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-E 408
C SG +E G ++Y + N C ++D+ + G + +A L +P E
Sbjct: 535 CSHSGLVEEGLTLFSFMLEHYKTLA--RSNHYTC--IVDLLGRAGRLDEAYNLITTIPFE 590
Query: 409 KIVVSWTTMIAGC 421
W ++A C
Sbjct: 591 PTSTIWGALLAAC 603
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 293/563 (52%), Gaps = 37/563 (6%)
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
P D L A +F+ + + WN M+ G A + L L+ M +G+ + T
Sbjct: 7 PSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYT 66
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV--------CNTW------------- 182
L ++ +K + + +H + +G D D+ V W
Sbjct: 67 FPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSS 126
Query: 183 ----------ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
I+ YA D++ A+ +F I ++ VVSWN+M++G + ++L +
Sbjct: 127 HRDVVSYTALITGYASRGDIRSAQKLFDEIP--VKDVVSWNAMISGYAETGCYKEALELF 184
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
MM R D +T V++LS+ ++ GR VHS +GFD ++ ++N LI +YSKC
Sbjct: 185 EEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKC 244
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G++++A LF G+ + +SW +I GY EAL LF M +GE P+ VT+LS++
Sbjct: 245 GEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVL 304
Query: 353 SGCGQSGALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
C GA+++G+W Y G+ + + +LIDMY+KCG I A ++F ++ K
Sbjct: 305 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS 364
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
+ SW MI G A++G + DLF ++ ++ + P+ +TF+ +L AC+H+G L+ G I
Sbjct: 365 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFR 424
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
D ++ P+L+HY CM DLLG G KEA + + +M ++ D IW +LL ACK+H
Sbjct: 425 SMTQDYKMT--PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
N+E+ E A L K+EP + + Y+ ++N YA GRW+ VA IR ++ +KK PG S
Sbjct: 483 NVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSI 542
Query: 591 HINGKTCTFTAEDRYHAESELTY 613
++ F D++H ++ Y
Sbjct: 543 EVDSVVFEFVVGDKFHPQNREIY 565
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 226/464 (48%), Gaps = 52/464 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR ++ +L L+ M + PN+ TFPF+ K+CAK Q IHG ++
Sbjct: 32 WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVL 91
Query: 82 K--------------SPFVKCDRLDCAYKI------------------------------ 97
K S +V+ RL+ AYK+
Sbjct: 92 KLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQK 151
Query: 98 -FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
FDE+ V+DV SWNAM+ G+A+ G + L LF M + ++ D T + + A H+
Sbjct: 152 LFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGS 211
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L + VHS+ G D+++ + N I Y+KC +++ A +F G+ + V+SWN+++
Sbjct: 212 IELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLS--YKDVISWNTLI 269
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIHYG 274
G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H + G
Sbjct: 270 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKG 329
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
S+ +LI MY+KCGDI++A +F+ + ++ SW AMI G+A G D + LF
Sbjct: 330 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFS 389
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKC 393
M G PD +T + ++S C SG L+LG+ F + + + +ID+
Sbjct: 390 RMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHS 449
Query: 394 GSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
G +A E+ + E V W +++ C ++G VE + F Q
Sbjct: 450 GLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN-VELAESFAQ 492
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 300/583 (51%), Gaps = 19/583 (3%)
Query: 61 AKACAKLSDLIYSQMIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDV 106
A KL DL Q IH I+ S +V C L A +IF ++V
Sbjct: 28 ASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNV 87
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
SW ++ G A+ + +F M + + + VT+ + A + + + KSVH F
Sbjct: 88 VSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ G + +V V + Y+K + +A +F + ER VV+WN++V+G + +
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER--NVVTWNAIVSGYSDHGFSE 205
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
++++ + M G +D T++SL+ + + L G +H I G++ D + L+
Sbjct: 206 EAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALM 265
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP-DL 345
+Y +D A +F + + +WT M++G++ D A++ F M L D
Sbjct: 266 DIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS 325
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+ ++ ++S C SGAL+ G+ A +N+ V +A+IDMY+ CG++ DA+ FY
Sbjct: 326 IALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ EK VV W MIAG +NG +A+DLF Q+ L P+ TF++VL AC+H G + +G
Sbjct: 386 MGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEG 445
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ I + K P L HY+C+ D+LGR G+L A F+ +MP + D ++ TLL A
Sbjct: 446 --LQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGA 503
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C+IH NI++G ++ +F++EP+ A YV ++N YAL G W+GV R ++ ++KK P
Sbjct: 504 CRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDP 563
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S IN + TF A ++ H + +L L L ++ Y
Sbjct: 564 GFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGY 606
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 208/430 (48%), Gaps = 21/430 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH-----GHIVKSPFVKCDRLD--- 92
+FR+M + +PN +T + A A L + ++ +H G + FV+ +D
Sbjct: 109 VFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYS 168
Query: 93 ------CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
A ++F+ M+ R+V +WNA++ G++ GF E + LF MR G+ DF T+M
Sbjct: 169 KFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMS 228
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L A++ L + +H F I G + D + + Y + + A VF E +
Sbjct: 229 LIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFS--EMSV 286
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ V +W M+ G + G +D ++ + M+ +LD ++ +LSS AL QGR
Sbjct: 287 KDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRR 346
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
VH+ I F ++ V + +I MY+ CG+++ A+ F G+ ++ V W AMI+G G
Sbjct: 347 VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGY 406
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCN 384
+A+ LF M+ +G PD T +S++ C +G + G + F + + + N+
Sbjct: 407 GTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYA 466
Query: 385 ALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ID+ + G + A +P + ++T++ C ++G ++ ++ E++
Sbjct: 467 CVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEME-- 524
Query: 444 PNRVTFLAVL 453
PN + +L
Sbjct: 525 PNDAGYYVLL 534
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 314/639 (49%), Gaps = 30/639 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + A K + LF +M+ P+ T+ I ACA L L + +H I+
Sbjct: 418 WNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII 477
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F KC L+ A + F+ + RD SWNA++VG+ Q +
Sbjct: 478 KHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFN 537
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M L GI D V++ + + + L + VH F + G+ + ++ I Y
Sbjct: 538 MFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYV 597
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A VF + R +VVS N+++AG D ++++ ++ M G T
Sbjct: 598 KCGAIEAARYVFSCMPSR--SVVSMNAIIAGYAQND-LVEAIDLFQEMQNEGLNPSEITF 654
Query: 248 VSLLSSFVCPEALVQGRLVH----SHGIHYGFD-LDVSVINTLISMYSKCGDIDSARVLF 302
SLL + P L GR +H G+ Y D L VS L+ MY A +LF
Sbjct: 655 ASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVS----LLVMYMNSQRKTDADILF 710
Query: 303 DGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
++ + WTA+ISG+ Q G +EAL+L+ M PD T S++ C +L
Sbjct: 711 SEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASL 770
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAG 420
G+ + GL + + +A++DMY+KCG + + ++F + K V+SW +MI G
Sbjct: 771 GDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVG 830
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A NG AL +F ++ +RP+ VTFL VL AC+H G + +G I I I
Sbjct: 831 FAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIV- 889
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P LDH +CM DLLGR G LKEA +F+ + + +A IW TLL AC+IH + G A
Sbjct: 890 -PRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAE 948
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L +LEP +++PYV ++N YA G WD V ++R M+ ++K PG S + KT F
Sbjct: 949 KLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFV 1008
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
A D++H + + +L L +E+ Y + + E E
Sbjct: 1009 AGDKFHPSAGEIHALLKDLIALMKEDGYIAETDSLLEDE 1047
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 236/463 (50%), Gaps = 25/463 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V + L +F M++ + P+ + F + AC L
Sbjct: 251 WTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLG------------- 297
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
RLD A +F +M +V +WN M+ G + G + F NM G+++
Sbjct: 298 --------RLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTR 349
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T+ + A + L+ VH+ I G++++V V ++ I+ YAKC+ ++ A+ VF
Sbjct: 350 STLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDA 409
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
++ER +V WN+M+ G + + M GF D T S+LS+ C E L
Sbjct: 410 LDER--NLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLE 467
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
GR +HS I + F+ ++ V NTL+ MY+KCG ++ AR F+ I +R VSW A+I GY
Sbjct: 468 MGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYV 527
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q+ D DEA +F M G PD V++ S++SGC ALE G+ + GL+ +
Sbjct: 528 QEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLY 587
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
++LIDMY KCG+I AR +F +P + VVS +IAG A N + VEA+DLF ++
Sbjct: 588 AGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEG 646
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
L P+ +TF ++L ACT L G I + +G+ Y+ +
Sbjct: 647 LNPSEITFASLLDACTGPYKLNLGRQIHCL-IQKRGLLYDGDF 688
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 220/458 (48%), Gaps = 51/458 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + + + F ++ + PN T+ + +CA+L D+ + +H ++
Sbjct: 150 WNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVI 209
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F KC L A KIFD + D SW AM+ G+ Q+G E L+
Sbjct: 210 KMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALK 269
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F +M+ +G+ D V + + A + L D V + NT
Sbjct: 270 VFEDMQKLGLVPDQVAFVTVITACVGLGRLD-----------DACDLFVQMPNT------ 312
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
VV+WN M++G ++++F+++M G + +T+
Sbjct: 313 --------------------NVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTL 352
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ EAL G LVH+ I G + +V V ++LI+MY+KC +++A+ +FD + +
Sbjct: 353 GSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDE 412
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V W AM+ GYAQ G + ++LF M G PD T S++S C LE+G+
Sbjct: 413 RNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQL 472
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
++ + N+ V N L+DMY+KCG++ +AR+ F + + VSW +I G +
Sbjct: 473 HSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDE 532
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
EA ++F +++ + P+ V+ ++L C + LE+G
Sbjct: 533 DEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQG 570
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 228/512 (44%), Gaps = 64/512 (12%)
Query: 13 IYRSSTIN---QWN-SQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPF------IAK 62
++RS++++ Q N S I+ VN+ HK ++ + + PF +A+
Sbjct: 36 LHRSNSLSFHHQSNFSTIQRQVNQTSEHKIFTHLLKICLQQCQRIKIRHPFDETPQRLAQ 95
Query: 63 ACAKLSDLIYSQMIH---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
A ++ S I++Q + G + + KC ++ A K F+++ RD+ +WN++L
Sbjct: 96 A-SRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVL 154
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
+++ G LE V+ F +++ G+ + T + + + L K VH I +G +
Sbjct: 155 SMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFE 214
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ + I Y+KC L A +F + + VSW +M+AG +++L +
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVDARKIFDAVVD--PDTVSWTAMIAGYVQVGLPEEALKVFE 272
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M G D V+++++ V G
Sbjct: 273 DMQKLGLVPDQVAFVTVITACV-----------------------------------GLG 297
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+D A LF + + V+W MISG+ ++G EA+ F M G T+ S++S
Sbjct: 298 RLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLS 357
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
AL G A GL NV V ++LI+MY+KC + A+++F AL E+ +V
Sbjct: 358 AIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVL 417
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--II 471
W M+ G A NG + + LF ++ P+ T+ ++L AC LE G + II
Sbjct: 418 WNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII 477
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
+++ YN +++ + D+ + G L+EA
Sbjct: 478 KHN---FEYNLFVEN--TLVDMYAKCGALEEA 504
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 147/276 (53%), Gaps = 14/276 (5%)
Query: 257 PEALVQG----RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
P+ L Q + +H+ + +GF + + ++ +Y+KCG+++ A F+ + R ++
Sbjct: 90 PQRLAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILA 149
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
W +++S Y+++G L++ + F +++ G P+ T ++S C + ++LGK
Sbjct: 150 WNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVI 209
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
G + N +LIDMYSKCGS+ DAR++F A+ + VSWT MIAG G EAL
Sbjct: 210 KMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALK 269
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
+F + +L L P++V F+ V+ AC G L+ + + + +++N + +
Sbjct: 270 VFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHV---- 325
Query: 493 LLGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCA 525
++G EA+DF ++M +KS G++L A
Sbjct: 326 ---KRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA 358
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 318/621 (51%), Gaps = 24/621 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ + + E K L +F+ M + +EP+ +T + + CA+L L ++ +HG I
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC L + +IF+++A ++ SW AM+ + + F E LR
Sbjct: 230 RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 289
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV-SVCNTWISSY 186
F M GI+ + VT+ + + + KSVH F + +D + S+ + Y
Sbjct: 290 SFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+C L E V + +R +V+WNS+++ + +L +R M+ + D T
Sbjct: 350 AECGKLSDCETVLRVVSDR--NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S +S+ + G+ +H H I D V N+LI MYSK G +DSA +F+ I
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R+ V+W +M+ G++Q G+ EA+ LF M + + VT L++I C G+LE GKW
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ GLKD + ALIDMY+KCG + A +F A+ + +VSW++MI ++G
Sbjct: 527 VHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGR 585
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELD 485
A+ F+Q++E +PN V F+ VL AC H+G +E+G + +++ K +P +
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM----KSFGVSPNSE 641
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H++C DLL R G LKEA ++ MP +DA +WG+L+ C+IH ++I + + L +
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDI 701
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
Y ++N YA G W+ +R+ MK + +KK PG S I+ K F A +
Sbjct: 702 VTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEEN 761
Query: 606 HAESELTYPVLDCLALHSREE 626
+++ Y L L + EE
Sbjct: 762 RIQTDEIYRFLGNLQNLTNEE 782
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 224/441 (50%), Gaps = 19/441 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSD-LIYSQMIHGHIVKSP--------------F 85
L+ ++ + + FP + +ACA + L +HG I+K +
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
+ L A K+FD M VRD+ +W+ ++ + G + LR+F M G++ D VT++
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ + L + +SVH D D ++CN+ ++ Y+KC DL +E +F I +
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAK- 265
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ VSW +M++ G+ + +L + M+ +G ++ T+ S+LSS + +G+
Sbjct: 266 -KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 266 VHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH + D + ++ L+ +Y++CG + + + DR V+W ++IS YA +G
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+ +AL LF M PD T+ S IS C +G + LGK + + D V N
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQN 443
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+LIDMYSK GS+ A +F + + VV+W +M+ G + NG VEA+ LF + L
Sbjct: 444 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 445 NRVTFLAVLQACTHTGFLEKG 465
N VTFLAV+QAC+ G LEKG
Sbjct: 504 NEVTFLAVIQACSSIGSLEKG 524
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 209/422 (49%), Gaps = 21/422 (4%)
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ FV L A +HLS+ VH I GVD D + + + Y + +L AE V
Sbjct: 99 SKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKV 158
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F G+ +R +V+W+++V+ C + +L ++ M+ +G D T++S++
Sbjct: 159 FDGMP--VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L R VH FDLD ++ N+L++MYSKCGD+ S+ +F+ I + VSWTAMIS
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y + ++ALR F M +G P+LVT+ S++S CG G + GK +A L
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 379 NVMVCN-ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N + AL+++Y++CG + D + + ++ +V+W ++I+ A G ++AL LF Q+
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYD-DKGISYNPELDHYSCMADLL 494
+ ++P+ T + + AC + G + G I +I+ D N +D YS
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYS------ 450
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
+ G + A + +S W ++LC + N A LF HS Y+
Sbjct: 451 -KSGSVDSASTVFNQIKHRS-VVTWNSMLCGFSQNGN----SVEAISLFDYMYHS---YL 501
Query: 555 EM 556
EM
Sbjct: 502 EM 503
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R+ I WNS I ++ + L LFRQM I+P+ T AC +
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 72 YSQMIHGHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ IHGH++++ + K +D A +F+++ R V +WN+ML GF+Q
Sbjct: 423 LGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQ 482
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G + LF M ++ + VT + + QA L K VH I G+ D+
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFT 541
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
I YAKC DL AE VF + R S SM+ + +++ + M+ +
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS--SMINAYGMHGRIGSAISTFNQMVES 599
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + + +++LS+ ++ +G+ + +G + I + S+ GD+ A
Sbjct: 600 GTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEA 659
Query: 299 -RVLFDGICDRTRVSWTAMISG--YAQKGDLDEALRLFFAMEAAGELPDLVT 347
R + + W ++++G QK D+ +A++ +L D+VT
Sbjct: 660 YRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK--------NDLSDIVT 703
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
+G L+ + + LI+ Y+ GS +R +F A P + +I A+D
Sbjct: 27 TGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAID 86
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHT-GFLEKGWAI--SIIQ--YDDKGISYNPELDHY 487
L+H+L+ + ++ F +VL+AC + L G + II+ DD + L
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLL--- 143
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV-AYCLFK 544
CM G+ G L +A MP++ D W TL+ +C +E GE V A +FK
Sbjct: 144 -CM---YGQTGNLSDAEKVFDGMPVR-DLVAWSTLVSSC-----LENGEVVKALRMFK 191
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 255/483 (52%), Gaps = 35/483 (7%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
LS LK +H+ I DV + IS + L A VF I+ + +NS +
Sbjct: 28 LSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNP--NLFIYNSFI 85
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G + D S +FY NG D T L+ + +L G H I +GFD
Sbjct: 86 RGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFD 145
Query: 277 LDVSVINTLISMYS-------------------------------KCGDIDSARVLFDGI 305
DV V N+L++MYS K GD+ SAR LFD +
Sbjct: 146 SDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKM 205
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ V+W+ MISGYA+ D+A+ L+F +++ G + ++S+I+ C GALELG+
Sbjct: 206 PEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGE 265
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+Y + N+++ AL+DMY++CGSI A +F LP + +SWTT+IAG A++G
Sbjct: 266 RAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHG 325
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+AL+ F ++ + L P +TF AVL AC+H G +E+G + + + + P L+
Sbjct: 326 YAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERG--LELFESMKRDYRIEPRLE 383
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY CM DLLGR GKL EA FV MP+K +A IWG LL AC+IH N EI E L +L
Sbjct: 384 HYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIEL 443
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + YV ++N YA +W+ V NIR MMK V K PG +LF ++GK FT D+
Sbjct: 444 KPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKT 503
Query: 606 HAE 608
H E
Sbjct: 504 HPE 506
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 47/277 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS IR + K+ + Q K+N + P+NLT+PF+ KAC + L HG I+
Sbjct: 81 YNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQII 140
Query: 82 KSPF---------------------------------------------VKCDRLDCAYK 96
+ F +K + A K
Sbjct: 141 RHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARK 200
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD+M +++ +W+ M+ G+A+ F + + L++ ++ G+ A+ ++ + + H
Sbjct: 201 LFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGA 260
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L + H + + + ++ + + YA+C + A VF + R +SW +++
Sbjct: 261 LELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPG--RDALSWTTLI 318
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
AG + +L ++ M G T ++LS+
Sbjct: 319 AGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSA 355
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+ I + K + L+ ++ + N + +CA L L + H +I+
Sbjct: 213 WSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYIL 272
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + +C +D A +FD++ RD SW ++ GFA G+ E L
Sbjct: 273 RNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALE 332
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
F M G+ +T + A H
Sbjct: 333 YFSRMEKAGLTPREITFTAVLSACSHG 359
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 175/539 (32%), Positives = 275/539 (51%), Gaps = 39/539 (7%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
IFD M RD S+N ++ GFA G L +F M+ G++ T + + A
Sbjct: 111 IFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLD 170
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +H I + +V VCN YA+C ++ A +F + +R VV+WN M+
Sbjct: 171 LRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMV--IRNVVTWNLMI 228
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G + + ++ + M + + D T S+L +++
Sbjct: 229 SGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYI--------------------- 267
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ G ID AR +F I ++ V WT MI G AQ G ++AL LF M
Sbjct: 268 --------------QAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEM 313
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
PD T+ S++S C + +L G+ A G+ D+++V +AL+DMY KCG
Sbjct: 314 LLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVT 373
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA +F + + VVSW +MI G ALNG+ +EAL L+ ++E +L+P+ VTF+ VL AC
Sbjct: 374 RDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSAC 433
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
H G +E+G D G+ P DHY+CM +L GR G + +A+D + SM + ++
Sbjct: 434 VHAGLVEEGKEYFCSMSDQHGLEPTP--DHYACMVNLFGRSGHMDKAVDLISSMSQEPNS 491
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
IW T+L C + +I+ GE A CL +L P +A PY+ ++N YA GRW VA+IR++M
Sbjct: 492 LIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLM 551
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
K VKKF S I+ + F A+DR H ++++ + L+ L +E +S + +
Sbjct: 552 KSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLV 610
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 193/436 (44%), Gaps = 53/436 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I L +F +M++ ++P T + AC +L DL + IHG I+
Sbjct: 123 YNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRII 182
Query: 82 --------------KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ +C +D A ++FD M +R+V +WN M+ G+ + E +
Sbjct: 183 ICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCID 242
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ M++ ++ D VT + A I A ++ + V FG
Sbjct: 243 LFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKV--FG-------------------- 280
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
E R + V W M+ GC K +D+L + M+ R D T+
Sbjct: 281 ---------------EIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTI 325
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S++SS +L G++VH G + D+ V + L+ MY KCG A +F +
Sbjct: 326 SSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQT 385
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-W 366
R VSW +MI GYA G EAL L+ M PD VT + ++S C +G +E GK +
Sbjct: 386 RNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEY 445
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F + + GL+ +++++ + G + A +L ++ E + WTT+++ C + G
Sbjct: 446 FCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505
Query: 426 EFVEALDLFHQLMELD 441
+ L+EL+
Sbjct: 506 DIKHGEMAARCLIELN 521
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 105/186 (56%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N ++S+Y+K G ++ RV+FD + R VS+ +ISG+A G AL +F M+ G
Sbjct: 93 NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P T +S+++ C Q L GK L NV VCNAL D+Y++CG I AR L
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRL 212
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + + VV+W MI+G N + + +DLFH++ +L+P++VT +VL A G++
Sbjct: 213 FDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYI 272
Query: 463 EKGWAI 468
++ +
Sbjct: 273 DEARKV 278
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 300/583 (51%), Gaps = 19/583 (3%)
Query: 61 AKACAKLSDLIYSQMIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDV 106
A KL DL Q IH I+ S +V C L A +IF ++V
Sbjct: 28 ASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNV 87
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
SW ++ G A+ + +F M + + + VT+ + A + + + KSVH F
Sbjct: 88 VSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ G + +V V + Y+K + +A +F + ER VVSWN++V+G + +
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER--NVVSWNAIVSGYSDHGFSE 205
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
++++ + M G +D T++SL+ + + L G +H I G++ D + L+
Sbjct: 206 EAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALM 265
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP-DL 345
+Y +D A +F + + +WT M++G++ D A++ F M L D
Sbjct: 266 DIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS 325
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+ ++ ++S C SGAL+ G+ A +N+ V +A+IDMY+ CG++ DA+ FY
Sbjct: 326 IVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ EK VV W MIAG +NG +A+DLF Q+ L P+ TF++VL AC+H G + +G
Sbjct: 386 MGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEG 445
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ I + K P L HY+C+ D+LGR G+L A F+ +MP + D ++ TLL A
Sbjct: 446 --LQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGA 503
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C+IH NI++G ++ +F++EP+ A YV ++N YAL G W+GV R ++ ++KK P
Sbjct: 504 CRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDP 563
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S IN + TF A ++ H + +L L L ++ Y
Sbjct: 564 GFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGY 606
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 207/430 (48%), Gaps = 21/430 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH-----GHIVKSPFVKCDRLD--- 92
+FR+M + +PN +T + A A L + ++ +H G + FV+ +D
Sbjct: 109 VFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYS 168
Query: 93 ------CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
A ++F+ M+ R+V SWNA++ G++ GF E + LF MR G+ DF T+M
Sbjct: 169 KFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMS 228
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L A++ L + +H F I G + D + + Y + + A VF E +
Sbjct: 229 LIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFS--EMFV 286
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ V +W M+ G + G +D ++ + M+ +LD ++ +LSS AL QGR
Sbjct: 287 KDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRR 346
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
VH+ I F ++ V + +I MY+ CG+++ A+ F G+ ++ V W AMI+G G
Sbjct: 347 VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGY 406
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCN 384
+A+ LF M+ +G PD T +S++ C +G + G + F + + N+
Sbjct: 407 GTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYA 466
Query: 385 ALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ID+ + G + A +P + ++T++ C ++G ++ ++ E++
Sbjct: 467 CVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEME-- 524
Query: 444 PNRVTFLAVL 453
PN + +L
Sbjct: 525 PNDAGYYVLL 534
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 197/638 (30%), Positives = 317/638 (49%), Gaps = 29/638 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + ++ +TL +M+Q+ + P+ +TF +C L IH +V
Sbjct: 113 WTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVV 172
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMA-VRDVASWNAMLVGFAQMGFLENVL 126
S + KC L A ++F +M R+V SW+ M A G + L
Sbjct: 173 DSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEAL 232
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
R F M L+GI+A ++ + A + + +HS G ++++ V N ++ Y
Sbjct: 233 RHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMY 292
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C ++ A VF ++E LR VVSWN M++ + D+ D++ Y+ M R D T
Sbjct: 293 GRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVT 349
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
VSLLS+ E + GR++H ++ + +V V N L+SMY+KCG AR +FD +
Sbjct: 350 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 409
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAM---EAAGE----LPDLVTVLSMISGCGQSG 359
R+ +SWT +IS Y ++ + EA LF M E G PD + +++++ C
Sbjct: 410 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVS 469
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMI 418
ALE GK A S GL + V A++++Y KCG I + R +F + + V W MI
Sbjct: 470 ALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMI 529
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYDDKG 477
A A G+ EAL LF ++ +RP+ +F+++L AC+HTG ++G + + + + +
Sbjct: 530 AVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRN 589
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
++ + H+ C+ADLLGR G+LKEA +F++ +P+K DA W +LL AC+ H +++ +
Sbjct: 590 VTRT--IQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKE 647
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA L +LEP A YV ++N YA +W VA +R M VKK G S I
Sbjct: 648 VANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMH 707
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
F D H + L L +E Y K +
Sbjct: 708 DFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMV 745
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 244/503 (48%), Gaps = 31/503 (6%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK---------------SPFVKCD 89
+++ + N T+ + + CA+ L + IH VK S + CD
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
A FD + R++ SW ++ FA G + LR MR G++ D VT +
Sbjct: 94 SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ + L +H + ++ D V N ++ Y KC L A+ VF + ER R V
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM-ERTRNV 212
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+SW+ M ++L +R M+ G + + +V++LS+ P + GRL+HS
Sbjct: 213 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSC 272
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR--VSWTAMISGYAQKGDLD 327
GF+ ++ V N +++MY +CG ++ AR +FD + + R VSW M+S Y
Sbjct: 273 IALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGK 332
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
+A++L+ M+ D VT +S++S C + + LG+ + L+ NV+V NAL+
Sbjct: 333 DAIQLYQRMQLRA---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALV 389
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD------ 441
MY+KCGS +AR +F + ++ ++SWTT+I+ EA LF Q++EL+
Sbjct: 390 SMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQ 449
Query: 442 -LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
++P+ + F+ +L AC LE+G +S Q G+S + + + + +L G+ G++
Sbjct: 450 RVKPDALAFVTILNACADVSALEQGKMVS-EQAASCGLSSDKAVG--TAVVNLYGKCGEI 506
Query: 501 KEALDFVQSMPIKSDAGIWGTLL 523
+E + + D +W ++
Sbjct: 507 EEGRRIFDGVCSRPDVQLWNAMI 529
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 8/292 (2%)
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDID 296
R + T LL +AL +GR +HS + H ++ + N ++SMY+ C
Sbjct: 37 QAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPG 96
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A+ FD + R SWT +++ +A G E LR M G PD VT ++ + CG
Sbjct: 97 DAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG 156
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWT 415
+L G L+ + V NAL++MY KCGS+ A+ +F + + V+SW+
Sbjct: 157 DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS 216
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYD 474
M AL+G EAL F ++ L ++ + + +L AC+ ++ G I S I
Sbjct: 217 IMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALS 276
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM-PIKSDAGIWGTLLCA 525
+ EL + + + GR G ++EA +M D W +L A
Sbjct: 277 ----GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSA 324
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 195/635 (30%), Positives = 317/635 (49%), Gaps = 29/635 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIA-KACAKLSDLIYSQMIHGH 79
WN+ I + K+L++FR+M K+ +N A +CA + L + IHG
Sbjct: 108 WNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGF 167
Query: 80 IVKSP--------------FVKCDRLDCAYKIFD-----EMAVRDVASWNAMLVGFAQMG 120
+VK ++KC + A +F+ E+ R++A WN M++G+
Sbjct: 168 LVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNE 227
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L L LF M +GI D TV+ + L++ K +H + +G+D DV V
Sbjct: 228 CLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGT 287
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-G 239
+ Y KC D + + +F + +V W S++ C +++L F+ M + G
Sbjct: 288 ALMEMYFKCGDPETSLQIF--KRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCG 345
Query: 240 FRLDVTTVVSLLS-SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
F V + +L + SF+ + +G +H I GFD DV V L+ Y KCGD++ A
Sbjct: 346 FPDPVILLAALRACSFLSLKP--RGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYA 403
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ +F G+ R VSW A+ISG+AQ DEAL+ F M++ P+ VT+ ++S C
Sbjct: 404 QQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHL 463
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
+ L K Y + N +V N+LI Y+KCG I +R +F LP + V+W +++
Sbjct: 464 SVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSIL 523
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
G ++G E F ++ E +++P+ TF ++L +C+H+G ++ GW +D +
Sbjct: 524 LGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNL 583
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
P ++ Y+CM DLLGR G L +A D + SMP D IWG+LL +CK H N ++ E V
Sbjct: 584 E--PRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVV 641
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A +F+L+ S V +AN Y G + V +RT +K+ +KK PG S ++
Sbjct: 642 ANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHI 701
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
F A D H S Y ++ L+L + Y H++
Sbjct: 702 FVAGDYSHDRSGDIYATIESLSLEMKRVGYVPHIQ 736
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 189/421 (44%), Gaps = 19/421 (4%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMA 102
FP + KA L D+ + IHGH++K F+ KC A +F+ M
Sbjct: 42 FPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERME 101
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLL 160
RD SWN M+ GF Q G L +F M G + V + + K L+
Sbjct: 102 ERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHG 161
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL---RTVVSWNSMVA 217
+H F + GVD+D + + I Y KC D+K AE VF I + R + WN M+
Sbjct: 162 LEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMIL 221
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G + +L + M+ G D +TVV +L L G+ +H + G D
Sbjct: 222 GYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDD 281
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV V L+ MY KCGD +++ +F + V W +++ AQ G +EAL F
Sbjct: 282 DVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFM 341
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
PD V +L+ + C G +A G +V V AL+D Y KCG +
Sbjct: 342 LDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDME 401
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A+++FY L + +VSW +I+G A N EAL F + ++PN VT +L CT
Sbjct: 402 YAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCT 461
Query: 458 H 458
H
Sbjct: 462 H 462
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 175/373 (46%), Gaps = 12/373 (3%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA-DFVTVMGLTQAAIHAKHLSLLKSV 163
DV+ N M+ + GF E+ +R++ + G +F L +A ++ K +
Sbjct: 2 DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQI 61
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYG 222
H + G D+ V N+ + Y KC A +F +EE R VSWN+M++G C G
Sbjct: 62 HGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEE--RDSVSWNTMISGFCQSG 119
Query: 223 DKFDDSLNFYRHMMYN--GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
D + SL +R M+ G + ++ LSS + L G +H + G D D
Sbjct: 120 D-YVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEF 178
Query: 281 VINTLISMYSKCGDIDSARVLFDGICD-----RTRVSWTAMISGYAQKGDLDEALRLFFA 335
+++ LI MY KCGDI +A +F+ I D R W MI GY L AL LF
Sbjct: 179 LVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVE 238
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M G PD TV+ ++ C Q L +GK GL D+V V AL++MY KCG
Sbjct: 239 MLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGD 298
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ ++F +V W +++ CA NG EAL+ F + M P+ V LA L+A
Sbjct: 299 PETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRA 358
Query: 456 CTHTGFLEKGWAI 468
C+ +G AI
Sbjct: 359 CSFLSLKPRGMAI 371
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 187/624 (29%), Positives = 313/624 (50%), Gaps = 18/624 (2%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
++ S I WN I V K+L L+ K + + + +F AC+
Sbjct: 200 FGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEV 259
Query: 70 LIYSQMIHGHIVK-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + + +H ++K P+V K ++ A K+FD++ ++V NAM+
Sbjct: 260 LDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISA 319
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F G + L L+ M+ D T+ L ++VH+ I + ++
Sbjct: 320 FIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN 379
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V++ + ++ Y KC + A+ VF ++ER VV+W SM+AG +F D+L+ +R M
Sbjct: 380 VAIQSALLTMYYKCGSTEDADSVFYTMKER--DVVAWGSMIAGFCQNRRFKDALDLFRAM 437
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G + D + S++S+ + E + G L+H I G + DV V +L+ MYSK G
Sbjct: 438 EKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFA 497
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+SA ++F + ++ V+W +MIS Y+ G + ++ L + G D V++ +++
Sbjct: 498 ESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAV 557
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL GK Y + ++ V NALIDMY KCG + A+ +F +P + +V+W
Sbjct: 558 SSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWN 617
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+MIAG +G EA+ LF ++ + P+ VTFLA++ +C+H+G +E+G + + +
Sbjct: 618 SMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIE 677
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
G+ P ++HY+ + DLLGR G+L +A F++ MPI +D +W LL AC+ H N+E+G
Sbjct: 678 YGV--EPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELG 735
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E VA L K+EP + YV + N Y WD AN+R MK +KK PG S + +
Sbjct: 736 ELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNR 795
Query: 596 TCTFTAEDRYHAESELTYPVLDCL 619
F + D Y L L
Sbjct: 796 VDVFFSGDSSSTRRIEIYKTLSSL 819
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 213/471 (45%), Gaps = 46/471 (9%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
NS+I+ V + + + L L + + + TFP + K CA LS+L + + IH IV
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83
Query: 83 --------------SPFVKCDRLDCAYKIFDEM-----AVRDVASWNAMLVGFAQMGFLE 123
+ +VKC L A ++FD+M + D+ WN ++ G+ + G E
Sbjct: 84 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F M+ + M Q +H + I + D + I
Sbjct: 144 EGLAQFCRMQ------ELSWYMAGRQ-------------IHGYIIRNMFEGDPYLETALI 184
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+ C A +F +E R +V+WN M+ G ++ SL Y +L
Sbjct: 185 GMYSSCSRPMEAWSLFGKLENR-SNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLV 243
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ ++ E L GR VH I F D V +L++MY+K G ++ A+ +FD
Sbjct: 244 SASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFD 303
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP-DLVTVLSMISGCGQSGALE 362
+ D+ AMIS + G +AL L+ M+ AGE P D T+ S++SGC G+ +
Sbjct: 304 QVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK-AGETPVDSFTISSLLSGCSVVGSYD 362
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ ++ NV + +AL+ MY KCGS DA +FY + E+ VV+W +MIAG
Sbjct: 363 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 422
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC-----THTGFLEKGWAI 468
N F +ALDLF + + ++ + +V+ A G L G+AI
Sbjct: 423 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAI 473
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 154/367 (41%), Gaps = 27/367 (7%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
S N+ + Q G L L + T L + +L +++H+
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT---VVSWNSMVAGCTYGDK 224
+ +G+ +D + + I+ Y KC L A VF + E + + WN ++ G
Sbjct: 82 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
F++ L + M LS ++ GR +H + I F+ D +
Sbjct: 142 FEEGLAQFCRMQE-------------LSWYMA------GRQIHGYIIRNMFEGDPYLETA 182
Query: 285 LISMYSKCGDIDSARVLFDGICDRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
LI MYS C A LF + +R+ V+W MI G+ + G +++L L+ A E
Sbjct: 183 LIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSL--AKNENC 240
Query: 344 DLVTV--LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
LV+ + C L+ G+ +D+ VC +L+ MY+K GS+ DA++
Sbjct: 241 KLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKK 300
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F + +K V MI+ NG +AL L++++ + + T ++L C+ G
Sbjct: 301 VFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGS 360
Query: 462 LEKGWAI 468
+ G +
Sbjct: 361 YDFGRTV 367
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 32/301 (10%)
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
S NS + K+ +L + ++ T SLL + L GR +H+
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-----WTAMISGYAQKGD 325
+ G D + +LI+MY KCG + SA +FD + + + W +I GY + G
Sbjct: 82 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+E L F M+ EL + G+ Y + + + A
Sbjct: 142 FEEGLAQFCRMQ---ELSWYMA----------------GRQIHGYIIRNMFEGDPYLETA 182
Query: 386 LIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
LI MYS C +A LF L + +V+W MI G NG + ++L+L+ + +
Sbjct: 183 LIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKL 242
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKE 502
+F AC+H L+ G Q I N + D Y C + + + G +++
Sbjct: 243 VSASFTGAFTACSHGEVLDFGR-----QVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVED 297
Query: 503 A 503
A
Sbjct: 298 A 298
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 255/461 (55%), Gaps = 3/461 (0%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+S+ +HS + +G+ +D V N+ I+ Y+ C A V + VSWN+++
Sbjct: 109 VSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVLDSAPQGACDTVSWNTII 168
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G G + +L + M+ LD T+++ L + + GRL HS + G
Sbjct: 169 SGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAG 228
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
++ + ++LISMY+KCG ++ AR +F G+ +R V WT+MISGY Q G EA+ LF M
Sbjct: 229 INCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDM 288
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G D T+ +++S C Q GAL+LG++ Y GL + V N+LIDMYSKCG I
Sbjct: 289 QITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYSKCGDI 348
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQA 455
A E+F L ++ V SWT MI G +NG EALDLF Q+ E + PN VTFL VL +
Sbjct: 349 NKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTS 408
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
C+H G +E+G+ Q P ++HY CM DLLGR L EA F+++MPI D
Sbjct: 409 CSHGGLVEQGF--HYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPD 466
Query: 516 AGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTM 575
+W +LL AC+ + + E+VA + +LEP A +V ++N YA RW V +RT
Sbjct: 467 VVVWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVYATTSRWVDVNELRTS 526
Query: 576 MKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
M +++ K PG S ++G F A D H E+E Y +L
Sbjct: 527 MDNSRMSKQPGCSFIEVDGCVHEFFAGDESHLETEAIYNIL 567
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 176/340 (51%), Gaps = 5/340 (1%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
D SWN ++ G+ + G L+ F M + D VT++ A+ A + + + H
Sbjct: 160 DTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCH 219
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
S + G + + ++ IS YAKC ++ A VF G+ E R VV W SM++G T K
Sbjct: 220 SLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHE--RNVVCWTSMISGYTQLGK 277
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
F +++N +R M G ++D T+ +++SS AL GR VH++ +G ++SV N+
Sbjct: 278 FKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNS 337
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LP 343
LI MYSKCGDI+ A +F G+ R SWTAMI G+ G EAL LF ME G+ +P
Sbjct: 338 LIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMP 397
Query: 344 DLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
+ VT L +++ C G +E G +F + L + ++D+ + + +A +
Sbjct: 398 NEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQF 457
Query: 403 FYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+P VV W +++ C GE A + +++EL+
Sbjct: 458 IKNMPIAPDVVVWRSLLFACRACGEVGLAEFVAERILELE 497
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 16/232 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + +K L F QM + + +++T A AK + ++ H +V
Sbjct: 164 WNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVV 223
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S + KC ++ A K+F M R+V W +M+ G+ Q+G + +
Sbjct: 224 VNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVN 283
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M++ G++ D T+ + + L L + VH++ G+ ++SV N+ I Y+
Sbjct: 284 LFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYS 343
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
KC D+ A +FCG+ + R V SW +M+ G T ++L+ + M G
Sbjct: 344 KCGDINKAHEIFCGLTK--RDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEG 393
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI--VVSWTTM 417
++ +G + + GL + V N+LI+MYS C AR++ + P+ VSW T+
Sbjct: 108 SVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVLDSAPQGACDTVSWNTI 167
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDK 476
I+G G +AL F Q+++ + + VT L L A G ++ G S++ +
Sbjct: 168 ISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGA 227
Query: 477 GIS---------------------------YNPELDHYSCMADLLGRKGKLKEALDFVQS 509
GI+ + + ++ M + GK KEA++ +
Sbjct: 228 GINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRD 287
Query: 510 MPI---KSDAGIWGTLLCACKIHLNIEIGEYV-AYC 541
M I K D G T++ +C +++G YV AYC
Sbjct: 288 MQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYC 323
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 188/604 (31%), Positives = 301/604 (49%), Gaps = 22/604 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR + E+HK + LF MK + ++ TF + CA DL H I+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC L+ A +IF+ M RD +WN ++ + Q
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M L GI +D + +A H L K VH + G+D D+ ++ I Y+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +K A VF + E +VVS N+++AG + + ++++ ++ M+ G T
Sbjct: 576 KCGIIKDARKVFSSLPEW--SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITF 632
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFDGIC 306
+++ + PE+L G H GF + + +L+ MY + A LF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 307 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ V WT M+SG++Q G +EAL+ + M G LPD T ++++ C +L G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALN 424
+ + + N LIDMY+KCG + + ++F + + VVSW ++I G A N
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G +AL +F + + + P+ +TFL VL AC+H G + G I + GI +
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI--EARV 870
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
DH +CM DLLGR G L+EA DF+++ +K DA +W +LL AC+IH + GE A L +
Sbjct: 871 DHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIE 930
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP +++ YV ++N YA G W+ +R +M+ VKK PG S + +T F A D+
Sbjct: 931 LEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDK 990
Query: 605 YHAE 608
H+E
Sbjct: 991 SHSE 994
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/594 (26%), Positives = 268/594 (45%), Gaps = 64/594 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W V + +L+F +M+ P++L F V
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV---------------------TV 267
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
+ +++ +L A +F EM+ DV +WN M+ G + G + F+NMR +++
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T+ + A +L L VH+ I +G+ +++ V ++ +S Y+KC+ ++ A VF
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+EE+ V WN+M+ G + + + + M +G+ +D T SLLS+ L
Sbjct: 388 LEEK--NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G HS I ++ V N L+ MY+KCG ++ AR +F+ +CDR V+W +I Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q + EA LF M G + D + S + C L GK + GL ++
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
++LIDMYSKCG I DAR++F +LPE VVS +IAG + N EA+ LF +++
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRG 624
Query: 442 LRPNRVTFLAVLQAC----------------THTGFLEKGWAISI----IQYDDKG---- 477
+ P+ +TF +++AC T GF +G + I + + +G
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA 684
Query: 478 ------ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKI 528
+S + ++ M + G +EAL F + M + D + T+L C +
Sbjct: 685 CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSV 744
Query: 529 HLNIEIGEYVAYCLF----KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
++ G + +F L+ ++ ++M YA G G + + M+R
Sbjct: 745 LSSLREGRAIHSLIFHLAHDLDELTSNTLIDM---YAKCGDMKGSSQVFDEMRR 795
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 237/507 (46%), Gaps = 54/507 (10%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WNS + + + K L F + +N I PN TF + CA+ +++ + + IH
Sbjct: 125 VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHC 184
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
++K + KCDR+ A ++F+ + + W + G+ + G E
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ +F MR G + D HL+ V+V NT+I
Sbjct: 245 AVLVFERMRDEGHRPD---------------HLAF----------------VTVINTYI- 272
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+ LK A L+F E VV+WN M++G ++ ++ +M + +
Sbjct: 273 ---RLGKLKDARLLFG--EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+T+ S+LS+ L G +VH+ I G ++ V ++L+SMYSKC +++A +F+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ ++ V W AMI GYA G+ + + LF M+++G D T S++S C S LE+G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
F + L N+ V NAL+DMY+KCG++ DAR++F + ++ V+W T+I +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
EA DLF ++ + + + L+ACTH L +G + + + +L
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK---CGLDRDL 564
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMP 511
S + D+ + G +K+A S+P
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 177/433 (40%), Gaps = 73/433 (16%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + K+VHS + +G+D++ + N + YAKC + AE F +E + V +WNSM+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE---KDVTAWNSML 132
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ + K L + + N + T +LS+ + GR +H I G +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ L+ MY+KC I AR +F+ I D V WT + SGY + G +EA+ +F M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 337 EAAGELPD---LVTVLS----------------------------MISGCGQSGA----- 360
G PD VTV++ MISG G+ G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 361 ------------------------------LELGKWFDNYACSGGLKDNVMVCNALIDMY 390
L+LG A GL N+ V ++L+ MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
SKC + A ++F AL EK V W MI G A NGE + ++LF + + TF
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
++L C + LE G I K L + + D+ + G L++A + M
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKK---LAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 511 PIKSDAGIWGTLL 523
D W T++
Sbjct: 490 -CDRDNVTWNTII 501
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 11/280 (3%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL G+ VHS + G D + + N ++ +Y+KC + A FD ++ +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y+ G + LR F ++ P+ T ++S C + +E G+ GL+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
N AL+DMY+KC I DAR +F + + V WT + +G G EA+ +F ++
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ RP+ + F+ V+ G L+ + G +P++ ++ M G++G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLF-------GEMSSPDVVAWNVMISGHGKRG 306
Query: 499 KLKEALDFVQSM---PIKSDAGIWGTLLCACKIHLNIEIG 535
A+++ +M +KS G++L A I N+++G
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/637 (29%), Positives = 318/637 (49%), Gaps = 38/637 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + L L+++M D++PN + + + ACA + L + IH I
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRIS 148
Query: 82 KSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ + KC L+ A ++F+ M+ R V+SWNAM+ +AQ G E +
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
RL+ +M ++ T + A + L + +H+ G + D+S+ N ++ Y
Sbjct: 209 RLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMY 265
Query: 187 AKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
A+C L A +F +RL R VVSW++M+A D FD+++ FY M G R +
Sbjct: 266 ARCKCLDDAAKIF----QRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNY 321
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T S+L + L GR VH + G+ + + L+ +Y+ G +D AR LFD
Sbjct: 322 YTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQ 381
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS-MISGCGQSGALEL 363
I +R WT +I GY+++G L L+ M+ ++P + S +IS C GA
Sbjct: 382 IENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFAD 441
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
+ + + G+ + ++ +L++MYS+ G++ AR++F + + ++WTT+IAG A
Sbjct: 442 ARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAK 501
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI-IQYDDKGISYNP 482
+GE AL L+ ++ P+ +TF+ VL AC+H G E+G + I IQ D + +P
Sbjct: 502 HGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSD---YAMHP 558
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+ HYSC+ DLL R G+L +A + + +MP++ + W +LL A +IH +++ + A +
Sbjct: 559 NIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQI 618
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
KL+P A YV ++N +A+ G G+A++R M VKK G S + + F
Sbjct: 619 TKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVG 678
Query: 603 DRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
D H + + L L+ +E Y +PE E
Sbjct: 679 DNSHPRFQEIFAELQRLSPKIKEAGY------VPESE 709
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 236/494 (47%), Gaps = 27/494 (5%)
Query: 66 KLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++S + + G+ + + KC + A FD +A ++ SW +ML +AQ G
Sbjct: 49 RISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAA 108
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS-FGIHIGVDADVSVCNTWIS 184
L L+ M L + TV+G A K L K++HS G+ DV + N+ ++
Sbjct: 109 LDLYKRMDLQPNPVVYTTVLG---ACASIKALEEGKAIHSRISGTKGLKLDVILENSLLT 165
Query: 185 SYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YAKC L+ A+ +F ER+ R+V SWN+M+A F++++ Y M
Sbjct: 166 MYAKCGSLEDAKRLF----ERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEP 218
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
V T S+LS+ L QGR +H+ G +LD+S+ N L++MY++C +D A +F
Sbjct: 219 SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIF 278
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ R VSW+AMI+ +A+ DEA+ + M+ G P+ T S++ C G L
Sbjct: 279 QRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLR 338
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ + G K ++ AL+D+Y+ GS+ +AR LF + + WT +I G +
Sbjct: 339 AGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYS 398
Query: 423 LNGEFVEALDLFHQLMELDLRP-NRVTFLAVLQACTHTG-FLEKGWAISIIQYDDKGISY 480
G L+L+ ++ P ++ + V+ AC G F + A S I+ D G+
Sbjct: 399 KQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD--GMIS 456
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY-VA 539
+ L + + ++ R G L+ A M + D W TL+ H GE+ +A
Sbjct: 457 DFVL--ATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKH-----GEHGLA 508
Query: 540 YCLFK-LEPHSAAP 552
L+K +E A P
Sbjct: 509 LGLYKEMELEGAEP 522
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 312/619 (50%), Gaps = 27/619 (4%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+ L +R+M + P+ F C+ DL Q++H I+++
Sbjct: 41 EALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTAL 100
Query: 85 ---FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM---RLVGIQ 138
+ +C L+ A K FDEM + + +WNA++ G+++ G L+++ +M G++
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D +T A +S + + + + G +D V N I+ Y+KC L+ A V
Sbjct: 161 PDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F ++ R V++WN+M++G +L ++ M N + +V T + LL++ E
Sbjct: 221 FDRLKNR--DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLE 278
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARVLFDGICDRTRVSWTAMI 317
L QGR +H G++ D+ + N L++MY+KC ++ AR +F+ + R ++W +I
Sbjct: 279 DLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILI 338
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
Y Q G +AL +F M+ P+ +T+ +++S C GA GK SG K
Sbjct: 339 VAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCK 398
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V++ N+L++MY++CGS+ D +F A+ +K +VSW+T+IA A +G L+ F +L
Sbjct: 399 ADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWEL 458
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
++ L + VT ++ L AC+H G L++G + D G++ P+ H+ CM DLL R
Sbjct: 459 LQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLA--PDYRHFLCMVDLLSRA 516
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE-M 556
G+L+ A + + MP DA W +LL CK+H + + VA LF+LE V +
Sbjct: 517 GRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLL 576
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+N YA GRWD ++R R +K PG S IN F A D+ H E EL +
Sbjct: 577 SNVYAEAGRWD---DVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEI 633
Query: 617 DCLALHSREEAYSSHLKWI 635
L+ ++ Y ++ +
Sbjct: 634 KRLSKQMKDAGYVPDMRMV 652
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 227/459 (49%), Gaps = 17/459 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---F 141
+ KC + A +F + + SW ++ FA+ G L + M L G++ D F
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKMAELVFC 200
V +G+ ++ K LL H+ + ++ D+ + I+ YA+C DL++A F
Sbjct: 62 VVAIGVCSSSKDLKQGQLL---HAMILETRLLEFDIILGTALITMYARCRDLELARKTF- 117
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN---GFRLDVTTVVSLLSSFVCP 257
E +T+V+WN+++AG + +L Y+ M+ G + D T S L +
Sbjct: 118 -DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVV 176
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ QGR + + + G+ D V N LI+MYSKCG ++SAR +FD + +R ++W MI
Sbjct: 177 GDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMI 236
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SGYA++G +AL LF M P++VT + +++ C LE G+ G +
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYE 296
Query: 378 DNVMVCNALIDMYSKC-GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
++++ N L++MY+KC S+ +AR++F + + V++W +I G+ +ALD+F Q
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ ++ PN +T VL AC G +G A+ + + ++ + + ++ R
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGR---CKADVVLENSLMNMYNR 413
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
G L + + ++ KS W TL+ A H + G
Sbjct: 414 CGSLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTG 451
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY KCG + A +F I VSWT +++ +A+ G EAL + M G PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYAL 406
+ I C S L+ G+ L + ++++ ALI MY++C + AR+ F +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD---LRPNRVTFLAVLQACTHTGFLE 463
+K +V+W +IAG + NG+ AL ++ ++ ++P+ +TF + L ACT G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 464 KGWAI 468
+G I
Sbjct: 181 QGREI 185
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R+ + WN I V +A L +F+QM+ ++ PN +T + ACA L +
Sbjct: 327 RTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGK 386
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H I + +C LD +F + + + SW+ ++ +AQ G
Sbjct: 387 AVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHG 446
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----GIHIGVDADV 176
L F+ + G+ AD VT++ A H L + V +F G H G+ D
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK--EGVQTFLSMVGDH-GLAPDY 503
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ ++ L+ AE + + L V+W S+++GC
Sbjct: 504 RHFLCMVDLLSRAGRLEAAENLIHDM-PFLPDAVAWTSLLSGC 545
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 281/548 (51%), Gaps = 43/548 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A IFD ++V +N M+ + L +F M D T + +A
Sbjct: 90 ARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSG 149
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+L + VH + +G+D ++ + N ++ Y KC L+ A V + R VVSWN
Sbjct: 150 LDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP--YRDVVSWN 207
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
SMVAG +FDD+L + M D T+ SL S VC +L + +H+
Sbjct: 208 SMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL-SPVVCYTSLENVQYIHN----- 261
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
+F+ + + +SW MI+ Y +EA+ LF
Sbjct: 262 ---------------------------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLF 294
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
ME G PD VT+ S++ CG AL LG+ Y G L+ N+++ NAL+DMY+KC
Sbjct: 295 LQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKC 354
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + +AR++F + + VVSWT+M++ +G+ +A+ LF ++++ P+ + F++VL
Sbjct: 355 GCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVL 414
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+HTG L++G + + GI P ++H++CM DL GR G+++EA F++ MP++
Sbjct: 415 SACSHTGLLDQGRHYFRMMTEQYGIV--PRIEHFACMVDLFGRAGEVEEAYSFIKQMPME 472
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+ +WG LL AC++H ++IG A LF+L P + YV ++N YA G W V N+R
Sbjct: 473 PNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVR 532
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
MK+ +KK PG S +NG+ TF A D+YH +++ Y LD L +E L
Sbjct: 533 YAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKE------LG 586
Query: 634 WIPEHEAG 641
+IP+ E+
Sbjct: 587 YIPQTESA 594
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 201/437 (45%), Gaps = 58/437 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N IR VN N + L +F+ M P++ TFP + KAC+ L +L +H IV
Sbjct: 105 FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + KC L A K+ D+M RDV SWN+M+ G+AQ G ++ L
Sbjct: 165 KVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALE 224
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M + + D T+ L+ VC Y
Sbjct: 225 ICKEMDSLNLNHDAGTMASLSPV---------------------------VC------YT 251
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
++++ +F ER+ + ++SWN M+A +++++ + M G + D
Sbjct: 252 SLENVQYIHNMF----ERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ SLL + AL GR +H + ++ + N L+ MY+KCG ++ AR +FD +
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R VSWT+M+S Y + G +A+ LF M +G+ PD + +S++S C +G L+ G+
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427
Query: 366 -WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCAL 423
+F G+ + ++D++ + G + +A +P E W +++ C +
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487
Query: 424 NGEF---VEALDLFHQL 437
+ + + A DL QL
Sbjct: 488 HSKMDIGLVAADLLFQL 504
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 168/371 (45%), Gaps = 41/371 (11%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K L+ L S H+ +D +++ + +Y+ + +A +F E+ VV +N
Sbjct: 52 KTLNKLHSKIVINEHLRIDPTLAI--KLMRAYSAQGETSVARYIFDRSLEK--NVVFFNV 107
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M+ + + ++L+ ++ M+ F D T +L + + L G VH + G
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG 167
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
D ++ + N L++MY KCG + AR + D + R VSW +M++GYAQ G D+AL +
Sbjct: 168 LDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICK 227
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M++ D T+ S+ + +VC Y+
Sbjct: 228 EMDSLNLNHDAGTMASL---------------------------SPVVC------YTSLE 254
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
++ +F + +K ++SW MIA N EA+ LF Q+ E ++P+ VT ++L
Sbjct: 255 NVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLP 314
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC L G + +Y +KG + P L + + D+ + G L+EA D M ++
Sbjct: 315 ACGDLSALFLGRRLH--KYIEKG-NLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLR- 370
Query: 515 DAGIWGTLLCA 525
D W +++ A
Sbjct: 371 DVVSWTSMMSA 381
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 8/259 (3%)
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
I+ +D ++ L+ YS G+ AR +FD ++ V + MI Y EAL
Sbjct: 63 INEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEAL 122
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
+F M + PD T ++ C L +G + GL N+ + NAL+ MY
Sbjct: 123 SIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMY 182
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KCG + +AR++ +P + VVSW +M+AG A +G+F +AL++ ++ L+L + T
Sbjct: 183 GKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA 242
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
++ +T + ++ + K L ++ M + EA+ M
Sbjct: 243 SLSPVVCYTSLENVQYIHNMFERMTK-----KNLISWNVMIAIYVNNSMPNEAVSLFLQM 297
Query: 511 P---IKSDAGIWGTLLCAC 526
+K DA +LL AC
Sbjct: 298 EECGMKPDAVTIASLLPAC 316
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/627 (29%), Positives = 320/627 (51%), Gaps = 27/627 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ---NDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
W++ I N + + LL F M Q N I PN F + ++C+ I
Sbjct: 110 WSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFA 169
Query: 79 HIVKSPF------VKCDRLD----------CAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
++K+ + V C +D A +FD+M +++ +W M+ ++Q+G L
Sbjct: 170 FLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLL 229
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
++ + LF + + D T+ L A + + SL K +HS+ I G+ +DV V T
Sbjct: 230 DDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTL 289
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAK ++ + +F + V+SW ++++G + +++ + +M++
Sbjct: 290 VDMYAKSAAVENSRKIFNTMLHH--NVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTP 347
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T S+L + G+ +H I G V N+LI+MY++ G ++ AR F
Sbjct: 348 NCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAF 407
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ + ++ +S+ A+ D DE+ G P T ++SG G +
Sbjct: 408 NILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASP--FTYACLLSGAACIGTIV 465
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ G N+ + NALI MYSKCG+ A ++F + + V++WT++I+G A
Sbjct: 466 KGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFA 525
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA-ISIIQYDDKGISYN 481
+G +AL+LF++++E+ ++PN VT++AVL AC+H G +++ W + + Y+ S +
Sbjct: 526 KHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNH---SIS 582
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++HY+CM DLLGR G L EA++F+ SMP +DA +W T L +C++H N ++GE+ A
Sbjct: 583 PRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKK 642
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ + EPH A Y+ ++N YA GRWD VA +R MK+ ++ K G S ++ + F
Sbjct: 643 ILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHV 702
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
D H ++ Y LD LAL + Y
Sbjct: 703 GDTSHPQARKIYDELDELALKIKNLGY 729
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 165/315 (52%), Gaps = 5/315 (1%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L +A I + +L L K +H I G+ D + N+ I+ Y+KC D + A +F +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY---NGFRLDVTTVVSLLSSFVCPEALVQG 263
R +VSW+++++ +L + HM+ N + +LL S P G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 264 RLVHSHGIHYG-FDLDVSVINTLISMYSKCG-DIDSARVLFDGICDRTRVSWTAMISGYA 321
+ + + G FD V V LI M++K G DI SAR++FD + + V+WT MI+ Y+
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q G LD+A+ LF + + PD T+ S++S C + LGK ++ GL +V
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V L+DMY+K ++ ++R++F + V+SWT +I+G + + EA+ LF ++
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344
Query: 442 LRPNRVTFLAVLQAC 456
+ PN TF +VL+AC
Sbjct: 345 VTPNCFTFSSVLKAC 359
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 194/431 (45%), Gaps = 25/431 (5%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMA-- 102
+ KAC + +L +++H ++ S + KC + A IF M
Sbjct: 44 LLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHH 103
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSL 159
RD+ SW+A++ FA L F +M I + L ++ + +
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 160 LKSVHSFGIHIG-VDADVSVCNTWISSYAKCD-DLKMAELVFCGIEERLRTVVSWNSMVA 217
++ +F + G D+ V V I + K D++ A +VF ++ + +V+W M+
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQH--KNLVTWTLMIT 221
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
+ DD+++ + ++ + + D T+ SLLS+ V E G+ +HS I G
Sbjct: 222 RYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLAS 281
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV V TL+ MY+K ++++R +F+ + +SWTA+ISGY Q EA++LF M
Sbjct: 282 DVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNML 341
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
P+ T S++ C +GK GL V N+LI+MY++ G++
Sbjct: 342 HGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTME 401
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
AR+ F L EK ++S+ T A + E+ + H++ + + T+ +L
Sbjct: 402 CARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAA 459
Query: 458 HTGFLEKGWAI 468
G + KG I
Sbjct: 460 CIGTIVKGEQI 470
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 21/274 (7%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ W + I V + + + LF M + PN TF + KACA L D + +HG
Sbjct: 314 VMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K + + + ++CA K F+ + +++ S+N A L++
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNT--AADANAKALDS 431
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ + G+ A T L A + + +H+ + G ++ + N IS
Sbjct: 432 DESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALIS 491
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+KC + + A VF + R V++W S+++G +L + M+ G + +
Sbjct: 492 MYSKCGNKEAALQVFNDMG--YRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNE 549
Query: 245 TTVVSLLSSFVCPE-ALVQGRLVHSHGIHYGFDL 277
T +++LS+ C L+ H + +HY +
Sbjct: 550 VTYIAVLSA--CSHVGLIDEAWKHFNSMHYNHSI 581
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 292/574 (50%), Gaps = 28/574 (4%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVK-----------CDRLDC---AYKI 97
P+ T + CA+ ++ + +HG VK K + C + I
Sbjct: 274 PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMI 333
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG---IQADFVTVMGLTQAAIHA 154
F ++V SWN M+ GF+ G + L M L G ++AD VT++
Sbjct: 334 FKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQM-LAGSEDVKADEVTILNAVPVCFDE 392
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
L LK +H + + D + N +++SYAKC L A+ VF GI R +T+ SWN+
Sbjct: 393 SVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGI--RSKTLNSWNA 450
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++ G SL+ + M +G D TV SLLS+ ++L G+ VH I
Sbjct: 451 LIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 510
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ D+ V +++S+Y CG++ + +VLFD + D + VSW +I+G+ Q G + AL LF
Sbjct: 511 LERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFR 570
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M G P ++++++ C +L LG+ YA L+DN + ++IDMY+K G
Sbjct: 571 QMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNG 630
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+I + ++F L EK SW MI G ++G EA+ LF ++ P+ +TFL VL
Sbjct: 631 AITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLT 690
Query: 455 ACTHTGFLEKGWAISIIQYDDK---GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
AC H+G L +G ++Y D+ P L HY+C+ D+LGR G+L AL M
Sbjct: 691 ACNHSGLLHEG-----LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMS 745
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
+ D GIW +LL C+IH N+E+GE VA LF LEP YV ++N YA G+WD V
Sbjct: 746 EEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQ 805
Query: 572 IRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+R MK ++K G S +NGK +F +R+
Sbjct: 806 VRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERF 839
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 218/460 (47%), Gaps = 31/460 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYS 73
RS + QWN+ I H+ L +F +M + + P+N TFP + KACA +SD+
Sbjct: 147 RSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIG 206
Query: 74 QMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+HG +VK+ V+ + A K+FD M R++ SWN+M+ F+
Sbjct: 207 LAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN 266
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G D TV+ + + + + K VH + + + +D ++ V
Sbjct: 267 G------------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVN 314
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N + Y+K + ++++F + VVSWN+MV G + + + R M+
Sbjct: 315 NALMDMYSKWGCIIDSQMIF--KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGS 372
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRL--VHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ V L + VC + V L +H + + F D + N ++ Y+KCG +
Sbjct: 373 EDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSY 432
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A+ +F GI +T SW A+I GYAQ D +L M+ +G LPD TV S++S C +
Sbjct: 433 AQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSK 492
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+L LGK + L+ ++ V +++ +Y CG + + LF A+ + +VSW T+
Sbjct: 493 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTV 552
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
I G NG AL LF Q++ ++P ++ + V AC+
Sbjct: 553 ITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACS 592
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 206/431 (47%), Gaps = 20/431 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSD 69
++ + + WN+ + + + H T L RQM D++ + +T C S
Sbjct: 335 KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESV 394
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +H + +K FV KC L A ++F + + + SWNA++ G
Sbjct: 395 LPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGG 454
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+AQ L M+ G+ D TV L A K L L K VH F I ++ D
Sbjct: 455 YAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 514
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V + +S Y C +L +++F +E+ ++VSWN+++ G + +L +R M
Sbjct: 515 LFVYLSVLSLYIHCGELCTVQVLFDAMED--NSLVSWNTVITGHLQNGFPERALGLFRQM 572
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G + +++++ + +L GR H++ + + + + + ++I MY+K G I
Sbjct: 573 VLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAI 632
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ +F+G+ +++ SW AMI GY G EA++LF M+ G PD +T L +++ C
Sbjct: 633 TQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTAC 692
Query: 356 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS- 413
SG L G ++ D S GLK N+ +IDM + G + +A + + E+ V
Sbjct: 693 NHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGI 752
Query: 414 WTTMIAGCALN 424
W ++++ C ++
Sbjct: 753 WNSLLSWCRIH 763
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 193/443 (43%), Gaps = 29/443 (6%)
Query: 26 IREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF 85
+REA+ LLL K+ DIE ++ + SD + I + +
Sbjct: 83 VREALG-------LLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRI-----ITMY 130
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTV 144
C D + FD + +++ WNA++ +++ VL +F M + D T
Sbjct: 131 AMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTF 190
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A + + +VH + G+ D+ V N +S Y + A +F + E
Sbjct: 191 PCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPE 250
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R +VSWNSM+ + D DD F DV TVV++L + G+
Sbjct: 251 --RNLVSWNSMIR--VFSDNGDDG----------AFMPDVATVVTVLPVCAREREIGVGK 296
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH + D ++ V N L+ MYSK G I ++++F ++ VSW M+ G++ +G
Sbjct: 297 GVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEG 356
Query: 325 DLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
D+ L M A E D VT+L+ + C L K Y+ + ++
Sbjct: 357 DIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELL 416
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
NA + Y+KCGS+ A+ +F+ + K + SW +I G A + + +LD Q+ L
Sbjct: 417 ANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGL 476
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
P+ T ++L AC+ L G
Sbjct: 477 LPDNFTVCSLLSACSKLKSLRLG 499
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 164/373 (43%), Gaps = 30/373 (8%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
RS T+N WN+ I ++ +L QMK + + P+N T + AC+KL L +
Sbjct: 441 RSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGK 500
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+HG I++ S ++ C L +FD M + SWN ++ G Q G
Sbjct: 501 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNG 560
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
F E L LF M L GIQ +++M + A L L + H++ + ++ + +
Sbjct: 561 FPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIAC 620
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ I YAK + + VF G++E ++ SWN+M+ G + +++ + M G
Sbjct: 621 SIIDMYAKNGAITQSSKVFNGLKE--KSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGR 678
Query: 241 RLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D T + +L++ L +G R + +G ++ +I M + G +D+A
Sbjct: 679 NPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNAL 738
Query: 300 VLFDGICDRTRVS-WTAMISGYAQKGDLDEALRL---FFAMEAAGELPDLVTVLSMISGC 355
+ + + V W +++S +L+ ++ F +E E P+ +LS +
Sbjct: 739 RVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEP--EKPENYVLLSNLYA- 795
Query: 356 GQSGALELGKWFD 368
LGKW D
Sbjct: 796 ------GLGKWDD 802
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS------MISGCGQSGALELGKWFDNY 370
IS + + GDLD++ R+ E V +L ++ G+ +E+G+ +
Sbjct: 50 ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHL 109
Query: 371 AC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
S L+ + ++C +I MY+ CGS D+R F AL K + W +I+ + N + E
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHE 169
Query: 430 ALDLFHQLM-ELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
L++F +++ + L P+ TF V++AC + G A+
Sbjct: 170 VLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 302/607 (49%), Gaps = 72/607 (11%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
V S K +LD A+ +F M D SWNAM+ GFAQ E LR F +M D
Sbjct: 91 VLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMH----SED 146
Query: 141 FVTVMGLTQAAIHA----KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
FV +A+ A L++ +H+ DV + + + Y+KC + A+
Sbjct: 147 FVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQ 206
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
F G+ +R +VSWNS++ +L + MM NG D T+ S++S+
Sbjct: 207 RAFDGMA--VRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACAS 264
Query: 257 PEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDG----------- 304
A+ +G +H+ + + D+ + N L+ MY+KC ++ AR++FD
Sbjct: 265 WSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETS 324
Query: 305 -ICDRTR-------------------VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+C R VSW A+I+GY Q G+ +EA+RLF ++ P
Sbjct: 325 MVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT 384
Query: 345 LVTVLSMISGCGQSGALELGK-----------WFDNYACSGGLKDNVMVCNALIDMYSKC 393
T ++++ C L+LG+ WF + G + ++ V N+LIDMY KC
Sbjct: 385 HYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQS-----GEESDIFVGNSLIDMYMKC 439
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + D +F + E+ VVSW MI G A NG AL++F +++ +P+ VT + VL
Sbjct: 440 GMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVL 499
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G +E+G + G++ P DH++CM DLLGR G L EA D +Q+MP++
Sbjct: 500 SACSHAGLVEEGRRYFHSMRTELGLA--PMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQ 557
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
D +WG+LL ACK+H NIE+G+YVA L +++P ++ PYV ++N YA GRW V +R
Sbjct: 558 PDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVR 617
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
M++ V K PG S I + F +D+ H + + VL L + +K
Sbjct: 618 KQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFL---------TEQMK 668
Query: 634 W---IPE 637
W +PE
Sbjct: 669 WAGYVPE 675
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 213/472 (45%), Gaps = 52/472 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + + + L F M D N +F ACA L+DL IH I
Sbjct: 119 WNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALIS 178
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS ++ KC + CA + FD MAVR++ SWN+++ + Q G L
Sbjct: 179 KSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALE 238
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISSY 186
+F M G++ D +T+ + A + +H+ + D+ + N + Y
Sbjct: 239 VFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMY 298
Query: 187 AKCDDLKMAELVF---------------CGIEE-------RL-------RTVVSWNSMVA 217
AKC + A LVF CG RL + VVSWN+++A
Sbjct: 299 AKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIA 358
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-- 275
G T + ++++ + + T +LL++ L GR H+ + +GF
Sbjct: 359 GYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWF 418
Query: 276 ----DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
+ D+ V N+LI MY KCG ++ ++F+ + +R VSW AMI GYAQ G AL
Sbjct: 419 QSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALE 478
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMY 390
+F M +G+ PD VT++ ++S C +G +E G ++F + GL ++D+
Sbjct: 479 IFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLL 538
Query: 391 SKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ G + +A +L +P + V W +++A C ++G + +LME+D
Sbjct: 539 GRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEID 590
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 136/306 (44%), Gaps = 37/306 (12%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
LD + LL S V ++ + R +H+ I F ++ + N L+ Y KCG + AR +
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 302 FDGICDRT-------------------------------RVSWTAMISGYAQKGDLDEAL 330
FD + R + SW AM+SG+AQ +EAL
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
R F M + + + + S +S C L +G +V + +AL+DMY
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
SKCG + A+ F + + +VSW ++I NG +AL++F +M+ + P+ +T
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256
Query: 451 AVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
+V+ AC + +G I +++ D Y +L + + D+ + ++ EA
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRD----KYRNDLVLGNALVDMYAKCRRVNEARLVFD 312
Query: 509 SMPIKS 514
MP+++
Sbjct: 313 RMPLRN 318
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 156/402 (38%), Gaps = 89/402 (22%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WNS I A K L +F M N +EP+ +T + ACA S + IH
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIH 275
Query: 78 GHIVKSP---------------FVKCDRLDCAYKIFDEMAVR------------------ 104
+VK + KC R++ A +FD M +R
Sbjct: 276 ARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASV 335
Query: 105 -------------DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
+V SWNA++ G+ Q G E +RLF ++ I T L A
Sbjct: 336 KAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNAC 395
Query: 152 IHAKHLSLLKSVHS------FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ L L + H+ F G ++D+ V N+ I Y KC ++ LVF + E
Sbjct: 396 ANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVE- 454
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-R 264
R VVSWN+M+ G ++L +R M+ +G + D T++ +LS+ + +G R
Sbjct: 455 -RDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRR 513
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
HS G L M + +T M+ + G
Sbjct: 514 YFHSMRTELG----------LAPM---------------------KDHFTCMVDLLGRAG 542
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
LDEA L M PD V S+++ C G +ELGK+
Sbjct: 543 CLDEANDLIQTMPMQ---PDNVVWGSLLAACKVHGNIELGKY 581
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 309/610 (50%), Gaps = 20/610 (3%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAK-----ACAKLSDLIY---------SQMIHGHIVKSPFV 86
LF ++ + E N F I K CA+L+ ++ S G + +
Sbjct: 28 LFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYA 87
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
C ++ A + FD +A +D+ SW M+ +A+ ++ L+LF MR+VG + T G
Sbjct: 88 VCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAG 147
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ +A I + S+ KSVH + + D+ V + Y K D VF EE
Sbjct: 148 VLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVF---EEMP 204
Query: 207 R-TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ V+ W+ M++ ++ +++ + M + T S+L S E L G+
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQ 264
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
VH H + G D +V V N L+ +Y+KCG +D++ LF + +R V+W MI GY Q GD
Sbjct: 265 VHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGD 324
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
D+AL L+ M VT S++ C A+ELG + + +V+V NA
Sbjct: 325 GDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNA 384
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LIDMY+KCGSI +AR +F L E+ +SW MI+G +++G EAL F + E + PN
Sbjct: 385 LIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPN 444
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
++TF+++L AC++ G L+ G D GI P ++HY+CM LLGR G L +A+
Sbjct: 445 KLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE--PCMEHYTCMVWLLGRSGHLDKAVK 502
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
++ +P++ + +W LL AC IH ++++G A + +++P A +V ++N YA R
Sbjct: 503 LIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRR 562
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
W+ VA++R MK VKK PG S G F+ D H + ++ +L+ L + + +
Sbjct: 563 WNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEK 622
Query: 626 EAYSSHLKWI 635
Y L +
Sbjct: 623 AGYVPDLNAV 632
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 212/436 (48%), Gaps = 18/436 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + +L LF +M+ PN+ TF + KAC L + +HG ++
Sbjct: 110 WTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVL 169
Query: 82 KS-----PFVKCDRLDCAYK---------IFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ +V LD K +F+EM DV W+ M+ +AQ +
Sbjct: 170 KTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVE 229
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF MR + + T + Q+ ++L L K VH + +G+D +V V N + YA
Sbjct: 230 LFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYA 289
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L + +F +E R V+WN+M+ G D +L+ Y++M+ + T
Sbjct: 290 KCGRLDNSMKLF--MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTY 347
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + A+ G +HS + +D DV V N LI MY+KCG I +AR++FD + +
Sbjct: 348 SSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSE 407
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-W 366
R +SW AMISGY+ G + EAL+ F M+ +P+ +T +S++S C +G L++G+ +
Sbjct: 408 RDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNY 467
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F + G++ + ++ + + G + A +L +P E V W ++ C ++
Sbjct: 468 FKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHN 527
Query: 426 EFVEALDLFHQLMELD 441
+ + Q++++D
Sbjct: 528 DVDLGIMSAQQILQID 543
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 208/429 (48%), Gaps = 6/429 (1%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M R+ S+ ++ G+ Q L+ V+ LF + G + + + + + + L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
S+H+ +G +++ V I +YA C + A F I + +VSW MVA
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIA--CKDMVSWTGMVACYA 118
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
D+F DSL + M GF + T +L + + EA G+ VH + +++D+
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V L+ +Y+K GD + +F+ + + W+ MIS YAQ EA+ LF M A
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
LP+ T S++ C L+LGK + GL NV V NAL+D+Y+KCG + ++
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+LF LP + V+W TMI G +G+ +AL L+ ++E ++ + VT+ +VL+AC
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+E G I + K I Y+ ++ + + D+ + G +K A V M + D W
Sbjct: 359 AMELGTQIHSLSL--KTI-YDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWN 414
Query: 521 TLLCACKIH 529
++ +H
Sbjct: 415 AMISGYSMH 423
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/622 (30%), Positives = 313/622 (50%), Gaps = 18/622 (2%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
++ S I WN I V K+L L+ K + + + +F AC+ L
Sbjct: 607 KLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLD 666
Query: 72 YSQMIHGHIVK-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ + +H ++K P+V K ++ A K+FD++ ++V NAM+ F
Sbjct: 667 FGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFI 726
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
G + L L+ M+ D T+ L ++VH+ I + ++V+
Sbjct: 727 GNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVA 786
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ + ++ Y KC + A+ VF ++ER VV+W SM+AG +F D+L+ +R M
Sbjct: 787 IQSALLTMYYKCGSTEDADSVFYTMKER--DVVAWGSMIAGFCQNRRFKDALDLFRAMEK 844
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G + D + S++S+ + E + G L+H I G + DV V +L+ MYSK G +S
Sbjct: 845 EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAES 904
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A ++F + ++ V+W +MIS Y+ G + ++ L + G D V++ +++
Sbjct: 905 AEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSS 964
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
AL GK Y + ++ V NALIDMY KCG + A+ +F +P + +V+W +M
Sbjct: 965 VAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSM 1024
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG +G EA+ LF ++ + P+ VTFLA++ +C+H+G +E+G + + + G
Sbjct: 1025 IAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYG 1084
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
+ P ++HY+ + DLLGR G+L +A F++ MPI +D +W LL AC+ H N+E+GE
Sbjct: 1085 V--EPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGEL 1142
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA L K+EP + YV + N Y WD AN+R MK +KK PG S + +
Sbjct: 1143 VADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVD 1202
Query: 598 TFTAEDRYHAESELTYPVLDCL 619
F + D Y L L
Sbjct: 1203 VFFSGDSSSTRRIEIYKTLSSL 1224
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 217/469 (46%), Gaps = 27/469 (5%)
Query: 25 QIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-- 82
+I+ V + + + L L + + + TFP + K CA LS+L + + IH IV
Sbjct: 412 EIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471
Query: 83 ------------SPFVKCDRLDCAYKIFDEM-----AVRDVASWNAMLVGFAQMGFLENV 125
+ +VKC L A ++FD+M + D+ WN ++ G+ + G E
Sbjct: 472 LQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEG 531
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L F M+ +GI+ D ++ + + +H + I + D + I
Sbjct: 532 LAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGM 591
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y+ C A +F +E R +V+WN M+ G ++ SL Y +L
Sbjct: 592 YSSCSRPMEAWSLFGKLENR-SNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSA 650
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+ ++ E L GR VH I F D V +L++MY+K G ++ A+ +FD +
Sbjct: 651 SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV 710
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP-DLVTVLSMISGCGQSGALELG 364
D+ AMIS + G +AL L+ M+ AGE P D T+ S++SGC G+ + G
Sbjct: 711 LDKEVELRNAMISAFIGNGRAYDALGLYNKMK-AGETPVDSFTISSLLSGCSVVGSYDFG 769
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ ++ NV + +AL+ MY KCGS DA +FY + E+ VV+W +MIAG N
Sbjct: 770 RTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQN 829
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQAC-----THTGFLEKGWAI 468
F +ALDLF + + ++ + +V+ A G L G+AI
Sbjct: 830 RRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAI 878
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/530 (26%), Positives = 245/530 (46%), Gaps = 21/530 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN I + L F +M++ I P+ + + C +LS + + IHG
Sbjct: 512 ITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHG 571
Query: 79 HIVKS-----PFVK---------CDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQMGFLE 123
+I+++ P+++ C R A+ +F ++ R ++ +WN M+ GF + G E
Sbjct: 572 YIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWE 631
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L L+ + + + G A H + L + VH I + D VC + +
Sbjct: 632 KSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLL 691
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ YAK ++ A+ VF + + + V N+M++ + D+L Y M +D
Sbjct: 692 TMYAKSGSVEDAKKVFDQVLD--KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVD 749
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+ SLLS + GR VH+ I +V++ + L++MY KCG + A +F
Sbjct: 750 SFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFY 809
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ +R V+W +MI+G+ Q +AL LF AME G D + S+IS +EL
Sbjct: 810 TMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVEL 869
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G +A GL+ +V V +L+DMYSK G A +F ++P K +V+W +MI+ +
Sbjct: 870 GHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSW 929
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG +++L Q+++ + V+ VL A + L KG + Q + +
Sbjct: 930 NGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIR---LQIPSD 986
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
L + + D+ + G LK A ++MP + + W +++ H N E
Sbjct: 987 LQVENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCE 1035
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 123/288 (42%), Gaps = 13/288 (4%)
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
K+ +L + ++ T SLL + L GR +H+ + G D +
Sbjct: 421 KYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIAT 480
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVS-----WTAMISGYAQKGDLDEALRLFFAMEA 338
+LI+MY KCG + SA +FD + + + W +I GY + G +E L F M+
Sbjct: 481 SLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQE 540
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G PD ++ ++ C + G+ Y + + + ALI MYS C +
Sbjct: 541 LGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPME 600
Query: 399 ARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A LF L + +V+W MI G NG + ++L+L+ + + +F AC+
Sbjct: 601 AWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACS 660
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEA 503
H L+ G Q I N + D Y C + + + G +++A
Sbjct: 661 HGEVLDFGR-----QVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDA 703
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 188/630 (29%), Positives = 314/630 (49%), Gaps = 24/630 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + + + L QM+ + PN TF + A A S + +H IV
Sbjct: 173 WTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIV 232
Query: 82 KSPF----VKCDRLDCAY----------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F C+ L C Y +FD M VRD +WN M+ G+A +GF +
Sbjct: 233 KNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQ 292
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F+ MRL G++ + + L+ K +H + G + + + +Y+
Sbjct: 293 MFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYS 352
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F + + VV+W +M+ G + + +++ + M G R + T
Sbjct: 353 KCSSVDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTY 411
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DSARVLFDGIC 306
++L+ P +L+ +H+ I ++ SV L+ Y K G++ +SARV + I
Sbjct: 412 STVLAG--KPSSLLSQ--LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYS-IP 466
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA-LELGK 365
+ V+W+AM++G AQ D ++A+ +F + G P+ T S+I+ C S A +E GK
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
A G + + V +AL+ MYSK G+I A ++F E+ +VSW +MI G +G
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ +AL++F + L + VTF+ VL ACTH G +E+G I D I + +++
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHI--DKKIE 644
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HYSCM DL R G +A+D + MP + IW TLL AC++H N+E+G+ A L L
Sbjct: 645 HYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSL 704
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P+ A YV ++N +A+ G W+ A++R +M +VKK G S I + +F A D
Sbjct: 705 QPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVS 764
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKWI 635
H S+L Y L+ L++ ++ Y ++
Sbjct: 765 HPFSDLVYAKLEELSIKLKDMGYQPDTNYV 794
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 217/467 (46%), Gaps = 41/467 (8%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I+ +N + + N + L LF+ + + + + LT K C L D + + +H
Sbjct: 69 ISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHC 128
Query: 79 HIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+KS F+ K + + IFDEM +++V SW ++L G+A+ G +
Sbjct: 129 QSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDE 188
Query: 125 VLRLFYNMRLVGIQAD---FVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
V+ L M++ G+ + F TV+G L +I + VH+ + G + VCN
Sbjct: 189 VIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGV----QVHAMIVKNGFEFTTFVCN 244
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I Y K + + AE VF + +R V+WN M+ G + + + M G
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSM--VVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+L T + L L + +H + G++ + L+ YSKC +D A
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362
Query: 301 LFDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG---- 354
LF + D V+WTAMI G+ Q + ++A+ LF M G P+ T ++++G
Sbjct: 363 LFS-MADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421
Query: 355 -CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
Q A + +++ V AL+D Y K G++ ++ +FY++P K +V+
Sbjct: 422 LLSQLHAQIIKAYYEKVPS---------VATALLDAYVKTGNVVESARVFYSIPAKDIVA 472
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
W+ M+ G A + +A+++F QL++ ++PN TF +V+ AC+ +
Sbjct: 473 WSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSA 519
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 192/442 (43%), Gaps = 12/442 (2%)
Query: 84 PFVKC-DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
PF+ R A+++FDE ++D++ +N +L F++ L LF ++ G+ D +
Sbjct: 46 PFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGL 105
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + + + VH + G DVSV + + Y K +D + +F
Sbjct: 106 TLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFD-- 163
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E ++ VVSW S+++G D+ ++ M G + T ++L + +
Sbjct: 164 EMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEG 223
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G VH+ + GF+ V N LI MY K + A +FD + R V+W MI GYA
Sbjct: 224 GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAA 283
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G E ++F M AG + + C Q L K G + +
Sbjct: 284 IGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDI 343
Query: 383 CNALIDMYSKCGSIGDARELF-YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
AL+ YSKC S+ +A +LF A VV+WT MI G N +A+DLF Q+
Sbjct: 344 RTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREG 403
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+RPN T+ VL A + L + A I Y +K S + + D + G +
Sbjct: 404 VRPNHFTYSTVL-AGKPSSLLSQLHAQIIKAYYEKVPSVA------TALLDAYVKTGNVV 456
Query: 502 EALDFVQSMPIKSDAGIWGTLL 523
E+ S+P K D W +L
Sbjct: 457 ESARVFYSIPAK-DIVAWSAML 477
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/625 (29%), Positives = 318/625 (50%), Gaps = 24/625 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WNS I V + L LFR+M+ + N+ T + + CA+L+ L + + +H
Sbjct: 230 VASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHA 289
Query: 79 HIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++K + +C +D A ++F E+ +D SWN+ML + Q
Sbjct: 290 ALLKCGTEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEA 349
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ F M G D ++ L A H L + VH++ + +D+D+ + NT +
Sbjct: 350 IDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDM 409
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC ++ + VF + R++ VSW +++A ++ +++ +R G ++D
Sbjct: 410 YIKCYSVECSARVFDRM--RIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+ S+L + +++ + VHS+ I G LD+ + N +I +Y +CG++ A +F+ +
Sbjct: 468 MMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEML 526
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ V+WT+M++ +A+ G L EA+ LF M AG PD V ++ ++ +L GK
Sbjct: 527 DKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGK 586
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ G V ++L+DMYS CGS+ A ++F K VV WT MI ++G
Sbjct: 587 EIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHG 646
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS---YNP 482
+A+ +F +++E + P+ V+FLA+L AC+H+ +++G Y D +S P
Sbjct: 647 HGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKF-----YLDMMVSKYKLQP 701
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+HY+C+ DLLGR G+ +EA F++SMP++ + +W LL AC+IH N E+ L
Sbjct: 702 WQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKL 761
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
+LEP + YV ++N +A G+W+ V IRT M ++K P S I TFTA
Sbjct: 762 LELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTAR 821
Query: 603 DRYHAESELTYPVLDCLALHSREEA 627
D H +S+ + L + R E
Sbjct: 822 DHSHRDSQAIHLKLAEITEKLRREG 846
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 259/544 (47%), Gaps = 30/544 (5%)
Query: 8 PRLNRIY---RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQND----IEPNNLTFPFI 60
P +R++ + T+ WN+ I ++ A + + ++R M+ ++ P+ T +
Sbjct: 110 PDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASV 169
Query: 61 AKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMA-VRD 105
KAC D +HG VKS + KC LD A ++F+ M RD
Sbjct: 170 LKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRD 229
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
VASWN+ + G Q G L LF M+ G + T +G+ Q L+ + +H+
Sbjct: 230 VASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHA 289
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ G + ++ CN + YA+C + A VF I + + +SWNSM++ +
Sbjct: 290 ALLKCGTEFNIQ-CNALLVMYARCGWVDSALRVFREIGD--KDYISWNSMLSCYVQNRLY 346
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
++++F+ M+ NGF D +VSLLS+ L+ GR VH++ + D D+ + NTL
Sbjct: 347 AEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTL 406
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+ MY KC ++ + +FD + + VSWT +I+ YAQ EA+ F + G D
Sbjct: 407 MDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDP 466
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+ + S++ C ++ L K +YA GL D +++ N +ID+Y +CG + A +F
Sbjct: 467 MMMGSILEACSGLKSISLLKQVHSYAIRNGLLD-LILKNRIIDIYGECGEVCYALNIFEM 525
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
L +K +V+WT+M+ A NG EA+ LF +++ ++P+ V + +L A L KG
Sbjct: 526 LDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKG 585
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
I K + E S + D+ G + AL K D +W ++ A
Sbjct: 586 KEIHGFLIRGK---FPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINA 641
Query: 526 CKIH 529
+H
Sbjct: 642 TGMH 645
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 188/379 (49%), Gaps = 10/379 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR----LVGIQAD 140
+ KC RL A+++FD M R V SWNA++ G + ++ MR + G D
Sbjct: 103 YGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPD 162
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T+ + +A VH + G+D V N + YAKC L A VF
Sbjct: 163 GCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFE 222
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE-- 258
+ + R V SWNS ++GC F ++L+ +R M +GF ++ T V +L VC E
Sbjct: 223 WMRDG-RDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQ--VCAELA 279
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L GR +H+ + G + ++ N L+ MY++CG +DSA +F I D+ +SW +M+S
Sbjct: 280 QLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLS 338
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y Q EA+ F M G PD ++S++S G G L G+ YA L
Sbjct: 339 CYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDS 398
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ + N L+DMY KC S+ + +F + K VSWTT+IA A + + EA+ F
Sbjct: 399 DLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQ 458
Query: 439 ELDLRPNRVTFLAVLQACT 457
+ ++ + + ++L+AC+
Sbjct: 459 KEGIKVDPMMMGSILEACS 477
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
Query: 258 EALVQGRLVHSHGIHYGF--DLDVSVINT-LISMYSKCGDIDSARVLFDGICDRTRVSWT 314
A+ +GR +H+H + G D D + T L+ MY KCG + A LFDG+ RT SW
Sbjct: 69 RAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWN 128
Query: 315 AMISGYAQKGDLDEALRLFFAMEA----AGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
A+I G EA+ ++ AM A AG PD T+ S++ CG G G
Sbjct: 129 ALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGL 188
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFVE 429
A GL + +V NAL+ MY+KCG + A +F + + + V SW + I+GC NG F+E
Sbjct: 189 AVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLE 248
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
ALDLF ++ N T + VLQ C L G
Sbjct: 249 ALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHG 284
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 35/225 (15%)
Query: 322 QKGDLDEALRLFFAMEAAGELP----------DLVTVLSMISGCGQ--SGALELGKWFDN 369
+ GDL EALR A A G P DLV V +S Q + A+ G D+
Sbjct: 31 KDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDD 90
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
D + L+ MY KCG + DA LF +P + V SW +I C +G E
Sbjct: 91 --------DAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGE 142
Query: 430 ALDLFHQLMELD----LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
A+ ++ + + P+ T +VL+AC G G + G++ LD
Sbjct: 143 AVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEV-------HGLAVKSGLD 195
Query: 486 HYSCMADLL----GRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ +A+ L + G L AL + M D W + + C
Sbjct: 196 RSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 281/548 (51%), Gaps = 43/548 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A IFD ++V +N M+ + L +F M D T + +A
Sbjct: 90 ARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSG 149
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+L + VH + +G+D ++ + N ++ Y KC L+ A V + R VVSWN
Sbjct: 150 LDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP--YRDVVSWN 207
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
SMVAG +FDD+L + M D T+ SL S VC +L + +H+
Sbjct: 208 SMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL-SPVVCYTSLENVQYIHN----- 261
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
+F+ + + +SW MI+ Y +EA+ LF
Sbjct: 262 ---------------------------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLF 294
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
ME G PD VT+ S++ CG AL LG+ Y G L+ N+++ NAL+DMY+KC
Sbjct: 295 LQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKC 354
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + +AR++F + + VVSWT+M++ +G+ +A+ LF ++++ P+ + F++VL
Sbjct: 355 GCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVL 414
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+HTG L++G + + GI P ++H++CM DL GR G+++EA F++ MP++
Sbjct: 415 SACSHTGLLDQGRHYFRMMTEQYGIV--PRIEHFACMVDLFGRAGEVEEAYSFIKQMPME 472
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+ +WG LL AC++H ++IG A LF+L P + YV ++N YA G W V N+R
Sbjct: 473 PNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVR 532
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
MK+ +KK PG S +NG+ TF A D+YH +++ Y LD L +E L
Sbjct: 533 YAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKE------LG 586
Query: 634 WIPEHEAG 641
+IP+ E+
Sbjct: 587 YIPQTESA 594
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 201/437 (45%), Gaps = 58/437 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N IR VN N + L +F+ M P++ TFP + KAC+ L +L +H IV
Sbjct: 105 FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + KC L A K+ D+M RDV SWN+M+ G+AQ G ++ L
Sbjct: 165 KVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALE 224
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M + + D T+ L+ VC Y
Sbjct: 225 ICKEMDSLNLNHDAGTMASLSPV---------------------------VC------YT 251
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
++++ +F ER+ + ++SWN M+A +++++ + M G + D
Sbjct: 252 SLENVQYIHNMF----ERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ SLL + AL GR +H + ++ + N L+ MY+KCG ++ AR +FD +
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R VSWT+M+S Y + G +A+ LF M +G+ PD + +S++S C +G L+ G+
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427
Query: 366 -WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCAL 423
+F G+ + ++D++ + G + +A +P E W +++ C +
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487
Query: 424 NGEF---VEALDLFHQL 437
+ + + A DL QL
Sbjct: 488 HSKMDIGLVAADLLFQL 504
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 168/371 (45%), Gaps = 41/371 (11%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K L+ L S H+ +D +++ + +Y+ + +A +F E+ VV +N
Sbjct: 52 KTLNKLHSKIVINEHLRIDPTLAI--KLMRAYSAQGETSVARYIFDRSLEK--NVVFFNV 107
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M+ + + ++L+ ++ M+ F D T +L + + L G VH + G
Sbjct: 108 MIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG 167
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
D ++ + N L++MY KCG + AR + D + R VSW +M++GYAQ G D+AL +
Sbjct: 168 LDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICK 227
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M++ D T+ S+ + +VC Y+
Sbjct: 228 EMDSLNLNHDAGTMASL---------------------------SPVVC------YTSLE 254
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
++ +F + +K ++SW MIA N EA+ LF Q+ E ++P+ VT ++L
Sbjct: 255 NVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLP 314
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC L G + +Y +KG + P L + + D+ + G L+EA D M ++
Sbjct: 315 ACGDLSALFLGRRLH--KYIEKG-NLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR- 370
Query: 515 DAGIWGTLLCA 525
D W +++ A
Sbjct: 371 DVVSWTSMMSA 381
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 8/259 (3%)
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
I+ +D ++ L+ YS G+ AR +FD ++ V + MI Y EAL
Sbjct: 63 INEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEAL 122
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
+F M + PD T ++ C L +G + GL N+ + NAL+ MY
Sbjct: 123 SIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMY 182
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KCG + +AR++ +P + VVSW +M+AG A +G+F +AL++ ++ L+L + T
Sbjct: 183 GKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA 242
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
++ +T + ++ + K L ++ M + EA+ M
Sbjct: 243 SLSPVVCYTSLENVQYIHNMFERMTK-----KNLISWNVMIAIYVNNSMPNEAVSLFLQM 297
Query: 511 P---IKSDAGIWGTLLCAC 526
+K DA +LL AC
Sbjct: 298 EECGMKPDAVTIASLLPAC 316
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 289/550 (52%), Gaps = 15/550 (2%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
++ A+K+FD++ + + WNAM G++Q ++V+ LF M+ + + + T + ++
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ L + VH F I G A+ V T I YA + A VF + ER V+
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIER--NVI 118
Query: 211 SWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+W +M+ G T D L R + D+ +++S ++ + +++ R +
Sbjct: 119 AWTAMINGYITCCD-----LVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDK 173
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ DV NT+++ Y+ GD+ + LF+ + +R SW A+I GY + G E
Sbjct: 174 MPNK----DVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEV 229
Query: 330 LRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
L F M G + P+ T+++++S C + GAL+LGKW YA S G K NV V NAL+D
Sbjct: 230 LSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMD 289
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+KCG + A ++F ++ K ++SW T+I G A++G +AL+LF + P+ +T
Sbjct: 290 MYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGIT 349
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F+ +L ACTH G +E G++ DD I P ++HY C+ DLLGR G L A+DF++
Sbjct: 350 FIGILCACTHMGLVEDGFSYFKSMTDDYSIV--PRIEHYGCIVDLLGRAGLLAHAVDFIR 407
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
MPI++DA IW LL AC+++ N+E+ E L + EP + A YV ++N Y GRW
Sbjct: 408 KMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKD 467
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
VA ++ M+ KK PG SL +N F + D H E E Y L L R Y
Sbjct: 468 VARLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSGY 527
Query: 629 SSHLKWIPEH 638
L + E
Sbjct: 528 VPGLMELDER 537
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 209/418 (50%), Gaps = 29/418 (6%)
Query: 22 WNSQIREAVNKNEAHK-TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ R ++NE+HK ++LFRQMK D+ PN TFP I K+C K++ L + +H +
Sbjct: 19 WNAMFR-GYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINALKEGEEVHCFV 77
Query: 81 VKS-----PFVKCDRLD---------CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+KS PFV +D AY++F EM R+V +W AM+ G+ L
Sbjct: 78 IKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVTAR 137
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
RLF + + D V + I AK ++++ F + DV NT ++ Y
Sbjct: 138 RLFD----LAPERDIVLWNTMISGYIEAK--DVIRARELFDKM--PNKDVMSWNTVLNGY 189
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVT 245
A D+ E +F + E R V SWN+++ G T F + L+ ++ M+ +G + +
Sbjct: 190 ASNGDVMACERLFEEMPE--RNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDA 247
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+V++LS+ AL G+ VH + +G+ +V V N L+ MY+KCG +++A +F +
Sbjct: 248 TLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSM 307
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG- 364
++ +SW +I G A G +AL LF M+ AGE PD +T + ++ C G +E G
Sbjct: 308 DNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGF 367
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
+F + + + ++D+ + G + A + +P E V W ++ C
Sbjct: 368 SYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGAC 425
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/606 (31%), Positives = 293/606 (48%), Gaps = 56/606 (9%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
V + K LD A +F M RD +WN+M+ GFAQ E L F M G +
Sbjct: 92 VVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLN 151
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T A ++ +HS +DV + + + Y+KC ++ A+ VF
Sbjct: 152 EYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFD 211
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ +R VVSWNS++ ++L ++ M+ + D T+ S++S+ A+
Sbjct: 212 EMGDR--NVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAI 269
Query: 261 VQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGI-------------- 305
G+ VH+ + D+ + N + MY+KC I AR +FD +
Sbjct: 270 KVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSG 329
Query: 306 -----------------CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
+R VSW A+I+GY Q G+ +EAL LF ++ P T
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTF 389
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLK------DNVMVCNALIDMYSKCGSIGDAREL 402
+++ C L LG + G K D++ V N+LIDMY KCG + + +
Sbjct: 390 ANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F + E+ VSW MI G A NG EAL+LF ++++ +P+ +T + VL AC H GF+
Sbjct: 450 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFV 509
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
E+G D G++ P DHY+CM DLLGR G L+EA ++ MP++ D+ IWG+L
Sbjct: 510 EEGRHYFSSMTRDFGVA--PLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSL 567
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L ACK+H NI +G+YVA LF++E ++ PYV ++N YA G+W N+R +M++ V
Sbjct: 568 LAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVT 627
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL--------------ALHSREEAY 628
K PG S I G F +D+ H + + +LD L +L S E Y
Sbjct: 628 KQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMRQKQDHAETGSLSSEEMDY 687
Query: 629 SSHLKW 634
SS L W
Sbjct: 688 SSSLLW 693
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 217/475 (45%), Gaps = 58/475 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + + L F M + N TF AC+ L+D+ IH I
Sbjct: 120 WNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIA 179
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KSP + KC ++ A ++FDEM R+V SWN+++ + Q G L+
Sbjct: 180 KSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALK 239
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSY 186
+F M ++ D VT+ + A + + + VH+ + + + D+ + N ++ Y
Sbjct: 240 VFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMY 299
Query: 187 AKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVA 217
AKC +K A +F + R R VVSWN+++A
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G T + +++L+ + + T ++L + L G H H + +GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKF 419
Query: 278 ------DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
D+ V N+LI MY KCG ++ ++F + +R VSW AMI G+AQ G +EAL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG---LKDNVMVCNALI 387
LF M +GE PD +T++ ++S CG +G +E G+ +F + G L+D+ ++
Sbjct: 480 LFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY---TCMV 536
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
D+ + G + +A+ + +P + V W +++A C ++ + +L E++
Sbjct: 537 DLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVE 591
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 169/367 (46%), Gaps = 61/367 (16%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER-------------- 205
++ VH+ I G +V + N I +YAKC L+ +F + +R
Sbjct: 39 VRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTK 98
Query: 206 ---------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
R +WNSMV+G D+ +++L ++ M GF L+ T S
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASG 158
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
LS+ + +G +HS DV + + L+ MYSKCG+++ A+ +FD + DR
Sbjct: 159 LSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNV 218
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW ++I+ Y Q G EAL++F M + PD VT+ S+IS C A+++G+
Sbjct: 219 VSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHAR 278
Query: 371 ACS-GGLKDNVMVCNALIDMYSKCGSIGDARELFYALP---------------------- 407
L++++++ NA +DMY+KC I +AR +F ++P
Sbjct: 279 VVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKA 338
Query: 408 ---------EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
E+ VVSW +IAG NGE EAL LF L + P TF +L+AC
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACAD 398
Query: 459 TGFLEKG 465
L G
Sbjct: 399 LADLHLG 405
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 45/288 (15%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R VH+ I GF +V + N LI Y+KCG ++ R LFD + R +W ++++G +
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF-----------DNY-- 370
G LDEA LF +M D T SM+SG Q E ++ + Y
Sbjct: 100 GFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTF 155
Query: 371 -----ACSG------GLK-----------DNVMVCNALIDMYSKCGSIGDARELFYALPE 408
ACSG G++ +V + +AL+DMYSKCG++ DA+++F + +
Sbjct: 156 ASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGD 215
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ VVSW ++I NG VEAL +F ++E + P+ VT +V+ AC ++ G +
Sbjct: 216 RNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 469 --SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
+++ D ++ + D+ + ++KEA SMPI++
Sbjct: 276 HARVVKMD----KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 264/508 (51%), Gaps = 43/508 (8%)
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT-VVSWNS 214
+L L H F + G+D D + + +I + C L + + R + +N+
Sbjct: 53 NLKHLHQTHCFMLSRGLDQDNILLSRFIEA---CSSLGFSHYSHSIFTHKTRPDIYLYNT 109
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++ + + +++ Y ++ + R D ++ +L + V A+ GR +H I G
Sbjct: 110 IIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTG 169
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGIC---------------------------- 306
D+ V+ LI MYS CG + AR LFDG+C
Sbjct: 170 LVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFE 229
Query: 307 ---DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+R +SWTA+I+GYAQ +EA+ +F M+ PD + +L+ +S C GALEL
Sbjct: 230 RMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALEL 289
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+W NY GL V + NALIDMY+KCG I A E+F + K V++WT+MI G AL
Sbjct: 290 GEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLAL 349
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISY-- 480
+G EAL++F + ++PN +TF+A+L AC H G +E G W + G Y
Sbjct: 350 HGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCM-----GTKYGI 404
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P++ HY CM DLLGR G L+EA + V+ MP +++A IWG+LL A +IH + E+G+
Sbjct: 405 KPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQ 464
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L K+EPH++ Y ++N YA +W+ +R +M+ VKK PG S +N + F
Sbjct: 465 HLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFV 524
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAY 628
A D+ H +SE + VL J L S+ Y
Sbjct: 525 AGDKLHPQSERIFEVLCKJNLQSKIAMY 552
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 154/367 (41%), Gaps = 54/367 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
+N+ I+ N A + +LL+ ++ +D+ + + PF+ KA +L + + IH
Sbjct: 107 YNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAI 166
Query: 79 --------HIVKS----------------------------------PFVKCDRLDCAYK 96
H+V + + K +D A
Sbjct: 167 GTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARH 226
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F+ M R+V SW A++ G+AQM + +F M+L ++ D + ++ A H
Sbjct: 227 LFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGA 286
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L + +H++ G+ V + N I YAKC ++ A VF +E ++V++W SM+
Sbjct: 287 LELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEH--KSVITWTSMI 344
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ-GR-LVHSHGIHYG 274
G ++L + M N + + T V++LS+ C LV+ GR G YG
Sbjct: 345 DGLALHGLGREALEMFSCMERNRIKPNEITFVAILSA-CCHVGLVEMGRWYFKCMGTKYG 403
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLD---EAL 330
+ +I + + G + A+ L G+ W ++++ GD + +AL
Sbjct: 404 IKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQAL 463
Query: 331 RLFFAME 337
+ +E
Sbjct: 464 QHLIKVE 470
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 197/598 (32%), Positives = 296/598 (49%), Gaps = 31/598 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQ----NDIEPNNLTFPFIAKACAKLSDL 70
R + W + + V E L +M + PN+ T +AC L +L
Sbjct: 176 RERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDEL 235
Query: 71 IYSQMIHGHIVK-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
+ +HG+ VK SP V KC + A +F E+ +DV SW +++ +
Sbjct: 236 NSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIY 295
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
G + + LF M G+Q D V V L ++ ++ K+ H+ + +V
Sbjct: 296 CWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNV 355
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
V N IS Y K + + A VF + +R SWN M+ G L YR M
Sbjct: 356 LVGNALISMYGKFELVDNAGRVFRLLHQR--DADSWNLMIVGYCKAGCDVKCLELYREMQ 413
Query: 237 YNG---FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
+ F D ++VS +SS L GR H + I + D D SV N LI MY +CG
Sbjct: 414 FRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCG 473
Query: 294 DIDSARVLFD-GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
D A +F V+W +IS YA G + A+ L+ M G P+ T++++I
Sbjct: 474 KFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVI 533
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S C ALE G+ +Y G +V + ALIDMY+KCG +G AR +F ++ + VV
Sbjct: 534 SACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVV 593
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SI 470
+W MI+G ++GE +AL+LF ++ ++PN VTFLA+L AC H+G LE+G + +
Sbjct: 594 AWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRM 653
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
+Y S P L HY+CM DLLG+ G L+EA D V +MP++ D GIWGTLL ACK+H
Sbjct: 654 GKY-----SLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHD 708
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+ E+G +A F + + Y+ ++N Y +WD + +R MK + V+K G S
Sbjct: 709 DFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEIEKLREAMKNHGVQKGAGWS 766
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 242/535 (45%), Gaps = 34/535 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS IR ++ L R+M + P+ T P A A A+L L +H + V
Sbjct: 78 WNSLIRTHHCASDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCV 137
Query: 82 KSP------------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + +C + A K+F+EM RDV +W A++ G + G
Sbjct: 138 RYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECG 197
Query: 124 NVLRLFYNM-RLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ LR M RL G + + T+ +A L+ + +H + + +GV V
Sbjct: 198 DGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVI 257
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ S Y+KC + A +F + E + VVSW S++ + +++ ++ MM +G
Sbjct: 258 SALFSMYSKCHSTEDACSLFPELPE--KDVVSWTSLIGIYCWRGLIREAMELFQEMMESG 315
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D V LLS + G+ H+ + F +V V N LISMY K +D+A
Sbjct: 316 LQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAG 375
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE---LPDLVTVLSMISGCG 356
+F + R SW MI GY + G + L L+ M+ L D +++S IS C
Sbjct: 376 RVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCS 435
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKIVVSWT 415
+ L LG+ Y+ L ++ V N LI MY +CG A ++F A + VV+W
Sbjct: 436 RLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWN 495
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYD 474
T+I+ A G A+ L+ Q++ L PN T + V+ AC + LE+G I S ++
Sbjct: 496 TLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVK-- 553
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G Y+ ++ + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 554 EMGWDYDVSIN--TALIDMYAKCGQLGTARRIFDSM-LQHDVVAWNVMISGYGMH 605
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 13/218 (5%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
VH+ + G ++ L+S YS G A + F W ++I + D
Sbjct: 31 VHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASD 90
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL----KDNVM 381
AL M A+ P TV S + GAL +G Y GL +V
Sbjct: 91 FVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVA 150
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL- 440
V ++L+ MY++CG + DA +LF + E+ VV+WT +++GC NGE + L +++ L
Sbjct: 151 VPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLA 210
Query: 441 ---DLRPNRVTFLAVLQACT-----HTGFLEKGWAISI 470
RPN T + L+AC ++G G+A+ +
Sbjct: 211 GDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKV 248
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/602 (29%), Positives = 305/602 (50%), Gaps = 28/602 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE--PNNLTFPFIAKACAKLSDLIYSQ 74
S++ +N IR V + H + +F +M ++ P+ T+PF+AKA +L +
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++HG I++S F + +++ A +FD M RDV SWN M+ G+ + G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
++ + L +F M + D T++ + H K L + ++VH + + V N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ Y KC + A VF +E R V++W M+ G T +++L R M + G
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERR--DVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 241 RLDVTTVVSLLSSFVCPEALV--QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
R + T+ SL+S VC +AL G+ +H + D+ + +LISMY+KC +D
Sbjct: 316 RPNAVTIASLVS--VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F G W+A+I+G Q + +AL LF M P++ T+ S++
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK----IVVSW 414
L Y G ++ L+ +YSKCG++ A ++F + EK VV W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+I+G ++G+ AL +F +++ + PN +TF + L AC+H+G +E+G +++ ++
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG--LTLFRFM 551
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+ +HY+C+ DLLGR G+L EA + + ++P + + +WG LL AC H N+++
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQL 611
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
GE A LF+LEP + YV +AN YA GRW + +R+MM+ ++K PG S I
Sbjct: 612 GEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Query: 595 KT 596
+
Sbjct: 672 NS 673
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 225/478 (47%), Gaps = 13/478 (2%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKS---PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
I+K A +I + GHI+ + + C + A K+F+EM + S+N ++ +
Sbjct: 31 ISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMY 90
Query: 117 AQMGFLENVLRLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ G + + +F M G++ D T + +AA K + L VH +
Sbjct: 91 VREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR 150
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D V N ++ Y ++MA VF ++ R V+SWN+M++G +D+L +
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNR--DVISWNTMISGYYRNGYMNDALMMFDW 208
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ LD T+VS+L + L GR VH + V N L++MY KCG
Sbjct: 209 MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D AR +FD + R ++WT MI+GY + GD++ AL L M+ G P+ VT+ S++S
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSV 328
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
CG + + GK +A + ++++ +LI MY+KC + +F + W
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+ +IAGC N +AL LF ++ D+ PN T ++L A L + A++I Y
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ--AMNIHCYL 446
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEA---LDFVQSMPIKSDAGIWGTLLCACKIH 529
K + LD + + + + G L+ A + +Q D +WG L+ +H
Sbjct: 447 TK-TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/641 (28%), Positives = 317/641 (49%), Gaps = 32/641 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + W + I + + L LF +M+ +PN+ TF A+
Sbjct: 159 KERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGL 218
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H +VK+ ++KC + A +FD+ V+ V +WN+M+ G+A G
Sbjct: 219 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 278
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L +FY+MRL ++ + + + + K L + +H + G D ++
Sbjct: 279 LDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRT 338
Query: 181 TWISSYAKC----DDLKM-AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ +Y+KC D L++ E F G VVSW +M++G D ++++ + M
Sbjct: 339 ALMVAYSKCMAMLDALRLFKETGFLG------NVVSWTAMISGFLQNDGKEEAVGLFSEM 392
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
G R + T +L++ ++ VH+ + ++ +V L+ Y K G +
Sbjct: 393 KRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 448
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
D A +F GI ++ V+W+AM++GYAQ G+ + A+++F + G P+ T S+++ C
Sbjct: 449 DEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVC 508
Query: 356 GQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
+ A + GK F +A L ++ V +AL+ MY+K G I A E+F EK +VSW
Sbjct: 509 AATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSW 568
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+MI+G A +G+ ++ALD+F ++ + ++ + VTF+ V ACTH G +E+G I
Sbjct: 569 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVR 628
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D I+ P +H SCM DL R G+L++A+ + +MP + + IW T+L AC++H E+
Sbjct: 629 DCKIA--PTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTEL 686
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G A + + P +A YV ++N YA G W A +R +M VKK PG S +
Sbjct: 687 GRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 746
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
KT F A DR H + Y L+ L+ ++ Y ++
Sbjct: 747 KTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV 787
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 207/440 (47%), Gaps = 33/440 (7%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------------- 86
LF ++ +E + F + K A L D ++ + +H +K F+
Sbjct: 84 LFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 143
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVT 143
K +FDEM R+V +W ++ G+A+ E VL LF M+ G Q + F
Sbjct: 144 KGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAA 203
Query: 144 VMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+G L + + + L VH+ + G+D + V N+ I+ Y KC +++ A ++F
Sbjct: 204 ALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT 259
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E +++VV+WNSM++G ++L + M N RL ++ S++ + L
Sbjct: 260 E--VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRF 317
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSARVLFDGICDRTRVSWTAMISGYA 321
+H + YGF D ++ L+ YSKC +D+ R+ + VSWTAMISG+
Sbjct: 318 TEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFL 377
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF--DNYACSGGLKDN 379
Q +EA+ LF M+ G P+ T +++ E+ NY S
Sbjct: 378 QNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS----- 432
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V AL+D Y K G + +A ++F + K +V+W+ M+AG A GE A+ +F +L +
Sbjct: 433 -TVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTK 491
Query: 440 LDLRPNRVTFLAVLQACTHT 459
++PN TF ++L C T
Sbjct: 492 GGVKPNEFTFSSILNVCAAT 511
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 178/369 (48%), Gaps = 7/369 (1%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
RL A+ +FD+ RD S+ ++L GF++ G + RLF N++ +G++ D + +
Sbjct: 46 RLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLK 105
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ + +H I G DVSV + + +Y K + K VF ++E R V
Sbjct: 106 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKE--RNV 163
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR--LVH 267
V+W ++++G ++ L + M G + + T + L V E V GR VH
Sbjct: 164 VTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALG--VLAEEGVGGRGLQVH 221
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ + G D + V N+LI++Y KCG++ AR+LFD ++ V+W +MISGYA G
Sbjct: 222 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 281
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EAL +F++M + S+I C L + G + + AL+
Sbjct: 282 EALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALM 341
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
YSKC ++ DA LF VVSWT MI+G N EA+ LF ++ +RPN
Sbjct: 342 VAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNE 401
Query: 447 VTFLAVLQA 455
T+ +L A
Sbjct: 402 FTYSVILTA 410
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 9/294 (3%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL--SSFVCPEALVQGR 264
R S+ S++ G + + ++ + ++ + G +D + S+L S+ +C E GR
Sbjct: 60 RDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELF--GR 117
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H I +GF DVSV +L+ Y K + R +FD + +R V+WT +ISGYA+
Sbjct: 118 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNS 177
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+E L LF M+ G P+ T + + + G G GL + V N
Sbjct: 178 LNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 237
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+LI++Y KCG++ AR LF K VV+W +MI+G A NG +EAL +F+ + +R
Sbjct: 238 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRL 297
Query: 445 NRVTFLAVLQACTHTGFLE--KGWAISIIQYD---DKGISYNPELDHYSCMADL 493
+ +F ++++ C + L + S+++Y D+ I + + CMA L
Sbjct: 298 SESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAML 351
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/579 (31%), Positives = 295/579 (50%), Gaps = 21/579 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + NE + L F +M+ + P+ T + C DL ++ IH + V
Sbjct: 411 WNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAV 470
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ F C + +Y +F +M VR + SWN M+ GFA++G E L
Sbjct: 471 RNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLT 530
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + D VT++GL + ++ + +SVHS I G +DVS+ N I+ YA
Sbjct: 531 LFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYA 590
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
C ++ + +F R +++N++++G + + L + M+ N + ++ T+
Sbjct: 591 NCGIVEAGQQLFNSFCSR--NTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTL 648
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LL VC L QG+ +HS+ + L+ + + + MYS+ +I+ R +F +
Sbjct: 649 LNLLP--VCQSQL-QGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSA 705
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R + W A +S Q D + F M PD VT+L++IS C Q G +
Sbjct: 706 RNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACI 765
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G N++V NALID +S+CGSI ARELF + EK V+W MI +++G
Sbjct: 766 MAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGNG 825
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
ALDLF +++ + P+ +TF+++L AC+H G +E+G + D GI+ P ++HY
Sbjct: 826 EAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGIT--PRMEHY 883
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM DLLGR G L EA D V+SMP + +LL AC+ H N +IGE V L K E
Sbjct: 884 ACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKIGESVGKLLIKSEY 943
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+ YV ++N YA G+W +R M+ ++K G
Sbjct: 944 GKSRSYVMLSNIYASAGKWSDCEQLRLDMEAKGLRKNVG 982
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 214/420 (50%), Gaps = 21/420 (5%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIF 98
+N TFP + +AC S L + +H ++++ + K ++D + ++F
Sbjct: 138 DNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVF 197
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D M +RD+ SWNAM+ G++ G + M+ G+ + T++G+ A
Sbjct: 198 DCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRV 257
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
S+H+F + G D S+ + IS YA DDL + LVF + ++ +VS+NSM++
Sbjct: 258 AGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVF--DLQPVKDLVSFNSMISA 315
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV---QGRLVHSHGIHYGF 275
+ ++ +R M G ++ T+VS+L S C + L G VH I G
Sbjct: 316 YMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPS--CSDLLFGINHGESVHGMIIKLGL 373
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
VSV++ L+SMYSK G +DS+ +LF ++ + W +MISGY + + AL F
Sbjct: 374 AEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCK 433
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M+ AG PD TV+++ISGC + L + K YA + V NAL+ MY+ CG
Sbjct: 434 MQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGD 493
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
I + LF + ++++SW TMI+G A G+ +L LF Q+ ++ + VT + ++ +
Sbjct: 494 ISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISS 553
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 225/453 (49%), Gaps = 23/453 (5%)
Query: 22 WNSQIRE-AVNK--NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
WN+ + +VN EA +TL ++M+Q + PN T I C D + +H
Sbjct: 208 WNAMVSGYSVNGCFREAVETL---QEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHA 264
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K S + D L + +FD V+D+ S+N+M+ + Q +
Sbjct: 265 FALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKE 324
Query: 125 VLRLFYNMRLVGIQADFVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+F M G+ + +T++ L + ++ +SVH I +G+ VSV + +
Sbjct: 325 AFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALV 384
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
S Y+K L + L+FC E + + WNSM++G ++++ +L+ + M G D
Sbjct: 385 SMYSKLGKLDSSSLLFCCFTE--KNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPD 442
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
TTV++++S + L + +H++ + F+ SV+N L++MY+ CGDI ++ LF
Sbjct: 443 ATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQ 502
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R +SW MISG+A+ GD + +L LF M DLVT++ +IS S +
Sbjct: 503 KMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIV 562
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ + A G +V + NALI MY+ CG + ++LF + + +++ +++G
Sbjct: 563 GESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRK 622
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
N + L LF Q+++ D +PN VT L +L C
Sbjct: 623 NNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVC 655
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 12/411 (2%)
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V S N ++ F+ GF +L L+ L G +D T + +A A L L + VH
Sbjct: 106 VYSLNLVVRCFSDHGFHRELLDLYRG--LCGFGSDNFTFPPVIRACTAASCLQLGRQVHC 163
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF-CGIEERLRTVVSWNSMVAGCTYGDK 224
+ G ++V V + YAK + ++ VF C + LR ++SWN+MV+G +
Sbjct: 164 RVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMV---LRDLISWNAMVSGYSVNGC 220
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
F +++ + M G + +T+V ++ V G +H+ + G D S+ +
Sbjct: 221 FREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSA 280
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LISMY+ D+ S+R++FD + VS+ +MIS Y Q + EA +F M AG P+
Sbjct: 281 LISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPN 340
Query: 345 LVTVLSMISGCGQS-GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
L+T++S++ C + G+ GL + V V +AL+ MYSK G + + LF
Sbjct: 341 LITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLF 400
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
EK + W +MI+G +N E+ ALD F ++ + P+ T + V+ C +T L
Sbjct: 401 CCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLH 460
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCM-ADLLGRKGKLKEALDFVQSMPIK 513
+I ++ SY ++ M AD G + + Q M ++
Sbjct: 461 VAKSIHAYAVRNRFESYQSVMNALLAMYADC----GDISTSYTLFQKMEVR 507
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 4/306 (1%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L+ +H+ G D V + Y A L+F V S N +V
Sbjct: 54 LKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLN-LV 112
Query: 217 AGCTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
C F + L+ YR + GF D T ++ + L GR VH + G
Sbjct: 113 VRCFSDHGFHRELLDLYRGLC--GFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGH 170
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+V V L+ MY+K G ID +R +FD + R +SW AM+SGY+ G EA+
Sbjct: 171 GSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQE 230
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M+ G P+ T++ ++ CG +G G +A GG D+ + +ALI MY+
Sbjct: 231 MQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDD 290
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ +R +F P K +VS+ +MI+ + + EA ++F + + PN +T ++VL +
Sbjct: 291 LSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPS 350
Query: 456 CTHTGF 461
C+ F
Sbjct: 351 CSDLLF 356
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 276/565 (48%), Gaps = 36/565 (6%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
F + V +W +++ F L F MR G D + ++ L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKC-------------------------DDL 192
+SVH F + +G+D D+ N ++ YAK +D+
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 193 KMAELVFC-GIEERLRT--------VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
K + GI+ R VVS+N+++AG ++D+L R M + D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+ S+L F +++G+ +H + I G D DV + ++L+ MY+K I+ + +F
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R +SW ++++GY Q G +EALRLF M A P V S+I C L L
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK Y GG N+ + +AL+DMYSKCG+I AR++F + VSWT +I G AL
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G EA+ LF ++ ++PN+V F+AVL AC+H G +++ W K N E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG--YFNSMTKVYGLNQE 479
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
L+HY+ +ADLLGR GKL+EA +F+ M ++ +W TLL +C +H N+E+ E VA +F
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
++ + YV M N YA GRW +A +R M++ ++K P S + KT F + D
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
Query: 604 RYHAESELTYPVLDCLALHSREEAY 628
R H + L + +E Y
Sbjct: 600 RSHPSMDKINEFLKAVMEQMEKEGY 624
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 225/485 (46%), Gaps = 60/485 (12%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
+ +S + W S IR +++ K L F +M+ + P++ FP + K+C + DL
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 72 YSQMIHGHIVKSPFVKCD-------------RLDCAYKI-----FDEMAVR--------- 104
+ + +HG IV+ + CD L KI FDEM R
Sbjct: 123 FGESVHGFIVRLG-MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 105 ------------------------DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
DV S+N ++ G+AQ G E+ LR+ M ++ D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 141 FVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
T+ + I ++++ ++ K +H + I G+D+DV + ++ + YAK ++ +E V
Sbjct: 242 SFTLSSVL--PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F + R +SWNS+VAG +++++L +R M+ + S++ +
Sbjct: 300 FSRL--YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L G+ +H + + GF ++ + + L+ MYSKCG+I +AR +FD + VSWTA+I
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLK 377
G+A G EA+ LF M+ G P+ V +++++ C G + E +F++ GL
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ A+ D+ + G + +A + E W+T+++ C+++ A + +
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537
Query: 437 LMELD 441
+ +D
Sbjct: 538 IFTVD 542
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 292/599 (48%), Gaps = 20/599 (3%)
Query: 31 NKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------ 84
N E H+ R M + I N ++ ++ K C L L ++ H + +
Sbjct: 72 NLREVHE---FIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMANSNKFI 128
Query: 85 -------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
+ C A + FD++ +D++SW+ ++ + + G ++ +RLF M +GI
Sbjct: 129 DNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGI 188
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ L + L L K +HS I IG A++S+ + Y KC L AE+
Sbjct: 189 TPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEV 248
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
+ + V+ ++ G T + D+L + M+ G LD +L +
Sbjct: 249 ATNKMTRK--NAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAAL 306
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
L G+ +HS+ I G + +VSV L+ Y KC ++AR F+ I + SW+A+I
Sbjct: 307 GDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALI 366
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+GY Q G D AL +F A+ + G L + ++ C L G A GL
Sbjct: 367 AGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLV 426
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ +A+I MYSKCG + A + F + + V+WT +I A +G+ EAL LF ++
Sbjct: 427 AYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEM 486
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+RPN VTF+ +L AC+H+G +++G I D+ G+ NP +DHY+CM D+ R
Sbjct: 487 QGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGV--NPTIDHYNCMIDVYSRA 544
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G L+EAL+ ++S+P + D W +LL C H N+EIG A +F+L+P +A YV M
Sbjct: 545 GLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMF 604
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
N YAL G+WD A R MM ++K S + GK F DR+H ++E Y L
Sbjct: 605 NLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKL 663
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 199/419 (47%), Gaps = 18/419 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
++ W++ I + + + LF +M I PN+ F + + S L + IH
Sbjct: 157 LSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHS 216
Query: 79 HIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+++ F VKC LD A ++M ++ + ++VG+ + +
Sbjct: 217 QLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRD 276
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L LF M G++ D + +A L K +HS+ I +G++++VSV +
Sbjct: 277 ALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVD 336
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC + A F I E SW++++AG +FD +L ++ + G L+
Sbjct: 337 FYVKCARFEAARQAFESIHE--PNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNS 394
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
++ + L+ G +H+ I G +S + +ISMYSKCG +D A F
Sbjct: 395 FIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLT 454
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I V+WTA+I +A G EALRLF M+ +G P+ VT + +++ C SG ++ G
Sbjct: 455 IDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEG 514
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
K D+ + G+ + N +ID+YS+ G + +A E+ +LP E V+SW +++ GC
Sbjct: 515 KKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGC 573
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/608 (30%), Positives = 306/608 (50%), Gaps = 41/608 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I VN L + MK+ + +F I K A + + Q +H IV
Sbjct: 68 WNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIV 127
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC+R++ A+++F + +R+ +WNA++ G+A +G
Sbjct: 128 KIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFW 187
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M L G++ D T L L VH+ + G+ +D +VCN I++Y+
Sbjct: 188 LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYS 247
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C ++ AE VF G E R +V+WNSM+A ++ +++ + M GF D+ T
Sbjct: 248 ECGSIEDAERVFDGAIET-RDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTY 306
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY--SKCGDIDSARVLFDGI 305
S++S+ QG+ +H I G + V + N+LI+MY S +D A +F+ +
Sbjct: 307 TSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL 366
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ VSW ++++G++Q G ++AL+ F M + + D +++ C L+LG+
Sbjct: 367 ENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 426
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
++ CG I DAR+ F A P+ ++W ++I G A +G
Sbjct: 427 ----------------------QVHVLCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 464
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
ALDLF + + ++ + +TF+AVL AC+H G +E+GW+ D GI P ++
Sbjct: 465 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIP--PRME 522
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DLLGR G+L EA +++MP + DA +W TLL AC+ +IE+ VA L +L
Sbjct: 523 HYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLEL 582
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP YV +++ + RW+ A+I+ +MK VKK PG S + + +F AEDR
Sbjct: 583 EPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVHSFNAEDRS 642
Query: 606 HAESELTY 613
H E Y
Sbjct: 643 HPNCEEIY 650
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 173/361 (47%), Gaps = 5/361 (1%)
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H I G A + N IS YAKC ++++A +F E R VSWN+M+AG
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFD--ETSQRDAVSWNTMIAGXVNFG 79
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
F+ +L F + M GF +D + S+L C + G+ VHS + G++ +V +
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGS 139
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MY+KC ++ A +F I R V+W A+ISGYA GD A L ME G
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEI 199
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T +++ +L GL + VCNA+I YS+CGSI DA +F
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259
Query: 404 -YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
A+ + +V+W +M+A +N + EA +LF ++ L P+ T+ +V+ A
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQ 319
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
+G ++ + +G+ + + + L + EAL+ +S+ K D W ++
Sbjct: 320 GQGKSLHGLVI-KRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENK-DHVSWNSI 377
Query: 523 L 523
L
Sbjct: 378 L 378
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
SSF AL + + H I G + N +IS Y+KCG+I A +FD R V
Sbjct: 10 SSFT---ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAV 66
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SW MI+G G+ + AL +M+ G D + S++ G G +E+G+ +
Sbjct: 67 SWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMI 126
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G + NV +AL+DMY+KC + DA E+F ++ + V+W +I+G A G+
Sbjct: 127 VKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGD 181
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 190/605 (31%), Positives = 305/605 (50%), Gaps = 57/605 (9%)
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
I G+ + + + K L+ A+K+F+E+ DV SW ++ GFA++G +VL LF M+
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381
Query: 136 GIQAD-FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
G+ + F + L + + + K +H + + G+D D + N+ + Y KC
Sbjct: 382 GVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGY 441
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM---------------MYNG 239
AE +F + E+ VSWN M++ S++ +R + M NG
Sbjct: 442 AEKLFGLMAEK--DTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNG 499
Query: 240 F-------------------RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+L + + L SS L G+ +H+ + G D
Sbjct: 500 CERVALELLYKMVAAGPAFNKLTFSIALVLASSL---SVLGLGKQIHTQVLKVGVLDDGF 556
Query: 281 VINTLISMYSKCGDIDSARVLFDGI------------CDRT---RVSWTAMISGYAQKGD 325
V N+LI MY KCG+++ A V+F + CD VSW++M+SGY Q G
Sbjct: 557 VRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGR 616
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
++AL+ F M + D T+ S++S C +G LELG+ Y G +V + ++
Sbjct: 617 FEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSS 676
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
+IDMY KCGS+ DA +F ++ VV WT+MI+GCAL+G+ EA+ LF ++ + PN
Sbjct: 677 IIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPN 736
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
V+F+ VL AC+H G LE+G + + GI P +H++CM DL GR G+L E +
Sbjct: 737 EVSFVGVLTACSHAGLLEEGCKYFRLMREVYGI--RPGAEHFTCMVDLYGRAGRLNEIKE 794
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+ + I + +W + L +C++H NIE+G +V L +LEP A PY+ ++ A R
Sbjct: 795 FIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHR 854
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
W+ A IR++M++ VKK P QS + + +F DR H + Y LD L +E
Sbjct: 855 WEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKE 914
Query: 626 EAYSS 630
YS+
Sbjct: 915 IGYST 919
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 218/465 (46%), Gaps = 61/465 (13%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKAC-AKLSDLIYSQMIHGHIVKSP------------ 84
L LF +M+ + PN T + K+C + ++D + IHG I+++
Sbjct: 371 VLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSIL 430
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF----------YNM 132
+VKC A K+F MA +D SWN M+ + Q+G ++ + LF +N
Sbjct: 431 DYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNT 490
Query: 133 RLVGIQADFVTVMGL------------------TQAAIHAKHLSLL---KSVHSFGIHIG 171
+ G+ + + L + A + A LS+L K +H+ + +G
Sbjct: 491 MIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVG 550
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV-------------VSWNSMVAG 218
V D V N+ I Y KC +++ A ++F + + + VSW+SMV+G
Sbjct: 551 VLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSG 610
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+F+D+L + M+ + +D T+ S++S+ L GR VH + G LD
Sbjct: 611 YVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLD 670
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V + +++I MY KCG ++ A ++F+ DR V WT+MISG A G EA+RLF M
Sbjct: 671 VFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMIN 730
Query: 339 AGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G P+ V+ + +++ C +G LE G K+F G++ ++D+Y + G +
Sbjct: 731 EGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLN 790
Query: 398 DARELFY-ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ +E + K+ W + ++ C ++ + + +L+EL+
Sbjct: 791 EIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELE 835
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 125/311 (40%), Gaps = 38/311 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + L L +M N LTF + LS L + IH ++
Sbjct: 488 WNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVL 547
Query: 82 K--------------SPFVKCDRLDCAYKIFDEM---------------AVRDVASWNAM 112
K + KC ++ A IF + AV + SW++M
Sbjct: 548 KVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSM 607
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
+ G+ Q G E+ L+ F M ++ D T+ + A A L L + VH + IG
Sbjct: 608 VSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGH 667
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
DV + ++ I Y KC L A L+F + + R VV W SM++GC + +++ +
Sbjct: 668 GLDVFLGSSIIDMYVKCGSLNDAWLIFN--QAKDRNVVLWTSMISGCALHGQGREAVRLF 725
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQG----RLVHSHGIHYGFDLDVSVINTLISM 288
M+ G + + V +L++ L +G RL+ YG ++ +
Sbjct: 726 ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMRE---VYGIRPGAEHFTCMVDL 782
Query: 289 YSKCGDIDSAR 299
Y + G ++ +
Sbjct: 783 YGRAGRLNEIK 793
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/583 (31%), Positives = 294/583 (50%), Gaps = 22/583 (3%)
Query: 62 KACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVA 107
K AKL L + +H H++K +VKC + K+FDEM +++V
Sbjct: 81 KISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVV 140
Query: 108 SWNAMLVGFAQMGFLENVLRL----FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
SWN ++ G + ++RL F M L + + +T+ GL +A+I + + + +
Sbjct: 141 SWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQL 200
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H F + G D++ V + + SYAK + A+ F + R +V WN MV+
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSR--DLVLWNVMVSCYALNG 258
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
+ ++ M G + D T S+++S + G+ VH I FDLDV V +
Sbjct: 259 VQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVAS 318
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MYSK +I+ AR FDG+ + VSWT M GY Q GD E +RL M P
Sbjct: 319 ALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYP 378
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D + + S++S CG A Y G + + + NAL+ YSKCGSIG A + F
Sbjct: 379 DELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSF 438
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
++ E ++SWT+++ A +G + +D+F +++ ++RP++V FL VL AC H GF+
Sbjct: 439 SSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVL 498
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+G + + I P+ +HY+ + DLLGR G L EA++ + SMP++ + G L
Sbjct: 499 EGLHYFNLMINVYQIM--PDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFL 556
Query: 524 CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
ACK++ N+ + + + LF +EP+ Y M+N YA G W VA +R +M+ K
Sbjct: 557 GACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFK 616
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
PG S G+ TF + D+ H + Y +LD L +EE
Sbjct: 617 VPGCSWMETAGEVHTFVSRDKTHPRAVQVYGMLDLLVRLMKEE 659
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 187/411 (45%), Gaps = 25/411 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLL----FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ WN+ I V N + L FRQM + PN +T + +A +L+D+
Sbjct: 138 NVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGIC 197
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +H I+KS F K +D A FDE++ RD+ WN M+ +A
Sbjct: 198 RQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALN 257
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G +F MRL G++ D T + + L K VH I + D DV V
Sbjct: 258 GVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVA 317
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD--DSLNFYRHMMY 237
+ + Y+K ++++ A F G+ ++ +VSW +M G YG D + + + M+
Sbjct: 318 SALVDMYSKNENIEDARKAFDGM--JVKNIVSWTTMXVG--YGQHGDGKEXMRLLQEMIR 373
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
D + S+LSS A + VH++ + GF+ +S+ N L+S YSKCG I S
Sbjct: 374 VYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGS 433
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A F + + +SWT+++ YA G + + +F + ++ PD V L ++S C
Sbjct: 434 AFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAH 493
Query: 358 SG-ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
G LE +F+ + + ++ID+ + G + +A L ++P
Sbjct: 494 GGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMP 544
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/638 (30%), Positives = 323/638 (50%), Gaps = 31/638 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R T+ WN+ I V + + F M + I+P+ ++F + A + L D +
Sbjct: 171 RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNAN 230
Query: 75 MIHGHIVK--SPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++HG +VK S +V + L+ A K+FD R+ WN M+ F Q
Sbjct: 231 VVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQ 290
Query: 119 MGF-LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
F LE + F + D VT++ AA H + L + +H+F I V
Sbjct: 291 NNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVC 350
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V N I+ Y++C+ + + +F + E+ VVSWN+M++ D++L + M
Sbjct: 351 VMNALIAMYSRCNSIDTSFKIFDNMPEK--DVVSWNTMISAFVQNGLNDEALMLFYEMKK 408
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+D TV +LLS+ G+ H + + G + + + LI MY+K G I++
Sbjct: 409 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEA 467
Query: 298 ARVLFDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
A+ +F+ +R + +W +M+SGY Q G +D+A + M +P++VT+ S++ C
Sbjct: 468 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPAC 527
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
SG ++ GK ++ L NV V ALIDMYSK GSI A +F EK +V+++
Sbjct: 528 NPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYS 587
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
TMI G +G AL +FH++ + ++P+ VT +AVL AC++ G +++G I ++
Sbjct: 588 TMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI----FES 643
Query: 476 KGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCACKIHLNI 532
YN P +H+ C+AD+LGR G++ +A +FV + K + IWG+LL AC+IH
Sbjct: 644 MRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQF 703
Query: 533 EIGEYVAYCLFKLEPHSAAP--YVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
E+G+ VA L ++E + +V ++N YA W+ V +R M+ +KK G S
Sbjct: 704 ELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWI 763
Query: 591 HINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
I G F ++DR H +S+ Y +L+ L + + Y
Sbjct: 764 EIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGY 801
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 240/527 (45%), Gaps = 49/527 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQN--DIEPNNLTFPFIAKACAKLSDLIY 72
R ST+ WN+ I V N + LL + MK + ++ ++ T+ + KACA +L+
Sbjct: 56 RPSTV-LWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVV 114
Query: 73 SQMIHGHIVK-----------------------SPFVKC----DRLDCAYKIFDEMAVRD 105
+ +H H ++ +P K R D K+FD M R
Sbjct: 115 GKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRT 174
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V +WN ++ + + ++ F M +GI+ V+ + + A VH
Sbjct: 175 VVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHG 234
Query: 166 FGIHIGVD--ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
+ +G + D+ V ++ I YA+ L+ A+ VF ER V WN+M++ +
Sbjct: 235 MLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV--WNTMISAFVQNN 292
Query: 224 KFDDSLN-FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ + F++ + +D T++S +S+ + +H+ I V V+
Sbjct: 293 FSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVM 352
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N LI+MYS+C ID++ +FD + ++ VSW MIS + Q G DEAL LF+ M+ +
Sbjct: 353 NALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLM 412
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
D VTV +++S ++GK Y G++ M + LIDMY+K G I A+ +
Sbjct: 413 VDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM-DSYLIDMYAKSGLIEAAQNV 471
Query: 403 FYA--LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
F E+ +W +M++G NG +A + Q+++ + PN VT ++L AC +G
Sbjct: 472 FEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSG 531
Query: 461 FLEKGWAISIIQYDDKGISYNPELDH----YSCMADLLGRKGKLKEA 503
+++ G + G S +LD + + D+ + G + A
Sbjct: 532 YIDWGKQL-------HGFSIRNDLDQNVFVATALIDMYSKSGSIAHA 571
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 211/462 (45%), Gaps = 43/462 (9%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA--DFVTVMGL 147
+L A ++FD + WN +++G F + L + NM+ Q D T +
Sbjct: 43 QLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSV 102
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE--- 204
+A ++L + K+VH+ + ++ V N+ ++ Y+ C + G
Sbjct: 103 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 162
Query: 205 --------RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
R RTVV+WN+++A +++ +++ + MM G + + V++ +F
Sbjct: 163 VRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSS 222
Query: 257 PEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
+VH + G + D+ V+++ I MY++ G ++ A+ +FD +R W
Sbjct: 223 LGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWN 282
Query: 315 AMISGYAQKGDLDEALRLFF-AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
MIS + Q E ++LFF A+E+ D VT+LS IS EL + +
Sbjct: 283 TMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIK 342
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
V V NALI MYS+C SI + ++F +PEK VVSW TMI+ NG EAL L
Sbjct: 343 NVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALML 402
Query: 434 FHQLMELDLRPNRVTFLAVLQAC-----------THTGFLEKGWAISIIQYDDKGISYNP 482
F+++ + DL + VT A+L A TH L G IQ++
Sbjct: 403 FYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-----IQFEG------- 450
Query: 483 ELDHYSCMADLLGRKGKLKEALD-FVQSMPIKSDAGIWGTLL 523
+D Y + D+ + G ++ A + F +S + D W +++
Sbjct: 451 -MDSY--LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 489
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+H + + I +S + G + AR LFD + + V W +I G
Sbjct: 19 LHTHST----NPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNF 74
Query: 326 LDEALRLFFAMEAAGELP--DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
DEAL + M+++ D T S++ C + L +GK + + + +V
Sbjct: 75 PDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVY 134
Query: 384 NALIDMYSKCGSIGD-------------ARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
N+L++MYS C S R++F + ++ VV+W T+IA + EA
Sbjct: 135 NSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEA 194
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+ F +M++ ++P+ V+F+ V A + G
Sbjct: 195 VKQFSMMMKIGIKPSPVSFVNVFPAFSSLG 224
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 271/524 (51%), Gaps = 4/524 (0%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F ++ ++ WN M+ G ++ + L+ +MR G + T+ + +A
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L +HS + G D DV V + +S Y KCD+ A VF I ++ VVSW +++
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK--NVVSWTAII 187
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G F +++ ++ ++ G + D ++V +L++ G + + G
Sbjct: 188 TGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG 247
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+V V +L+ MY KCG+++ A ++F + ++ VSW+ MI GYA G +AL LFF M
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQM 307
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
++ PD T++ ++S C GAL+LG W + N ++ ALIDMYSKCGS+
Sbjct: 308 QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
A E+F A+ +K V W M+ G ++NG LF + + +RP+ TF+ +L C
Sbjct: 368 TQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
TH GF+ +G + S P ++HY CM DLLGR G L EA + +MP+K +A
Sbjct: 428 THGGFVNEG--RQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNA 485
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
+WG LL CK+H + + E V L +LEP ++ YV+++N Y+ RW+ IR+ M
Sbjct: 486 VVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTM 545
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
K Q++K S I+G F D+ H SE Y LD L
Sbjct: 546 KEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELG 589
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 204/395 (51%), Gaps = 13/395 (3%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
LK +H+ + + +D D + N + ++LVF ++E + WN+M+ G
Sbjct: 32 LKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEP--NIFLWNTMIRGL 89
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
D FDD+++ Y M GF + T+ +L + + G +HS + G+D DV
Sbjct: 90 VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V +L+S+Y KC + D A +FD I D+ VSWTA+I+GY G EA+ F +
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD +++ +++ C + G G+W D Y G+ NV V +L+DMY KCG++ A
Sbjct: 210 GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F A+PEK +VSW+TMI G A NG +ALDLF Q+ +L+P+ T + VL AC
Sbjct: 270 NLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATL 329
Query: 460 GFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
G L+ G WA S++ D NP L + + D+ + G + +A + +M K D +
Sbjct: 330 GALDLGIWASSLM--DRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMK-KKDRVV 384
Query: 519 WGTLLCACKIHLNIEIGEYVAYCLFKL-EPHSAAP 552
W ++ + L++ + LF L E H P
Sbjct: 385 WNAMM----VGLSMNGHAKAVFSLFSLVEKHGIRP 415
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 206/443 (46%), Gaps = 18/443 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ I WN+ IR V+K+ + L+ M+ PNN T PF+ KACA+ D+
Sbjct: 75 KEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGL 134
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH +VK S +VKCD D A K+FD++ ++V SW A++ G+ G
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ F + +G++ D +++ + A + + + + G+ +V V
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ + Y KC +L+ A L+F + E + +VSW++M+ G + +L+ + M
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPE--KDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D T+V +LS+ AL G S F + + LI MYSKCG + A
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F + + RV W AM+ G + G LF +E G PD T + ++ GC G
Sbjct: 373 IFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 361 LELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMI 418
+ G+ +F+N L ++ ++D+ + G + +A +L +P K V W ++
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 419 AGCALNGEFVEALDLFHQLMELD 441
GC L+ + A + +L+EL+
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELE 515
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 278/540 (51%), Gaps = 9/540 (1%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
RL A +I D + A+++ +L Q+ L+ +++ + + G V +
Sbjct: 73 RLREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILD 132
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
I L K + + D+ N IS YAK L+ A +F + ER
Sbjct: 133 MYIKCNSLVNAKRL----FDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTER--DN 186
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
SW +M +G D+ +++L +R M + F+ + T+ S L++ ++L G+ +H
Sbjct: 187 FSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHG 246
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
H + G DLD V + L MY KCG I AR +FD DR VSWTAMI Y ++G +E
Sbjct: 247 HILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREE 306
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
LF + +G P+ T +++ C A ELGK Y G + + L+
Sbjct: 307 GFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVH 366
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+KCG+I +AR +F +P +VSWT++I+G A NG+ EAL F L++ +P+ +T
Sbjct: 367 MYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHIT 426
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F+ VL ACTH G ++KG + G+++ DHY+C+ DLL R G+L+EA D +
Sbjct: 427 FVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTA--DHYACLIDLLSRSGRLQEAEDIID 484
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
MPI+ D +W +LL C+IH N+++ + A LF++EP + A Y +AN YA G W G
Sbjct: 485 KMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGG 544
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
VA +R +M V K PG S I + F D HA+S+ + L L+ +EE Y
Sbjct: 545 VAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGY 604
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 236/535 (44%), Gaps = 60/535 (11%)
Query: 5 SLPPRLNRIYRSSTINQW------NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFP 58
S PP N ++S ++ ++ +EA++ K L Q+ + P+ T+
Sbjct: 34 SKPPIHNTFFKSGAKDELVKRLCKDNNFKEAIDILCEQKRLREAIQILDHVDRPSAATYS 93
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVR 104
+ + C +L L +H H S FV KC+ L A ++FDEMA R
Sbjct: 94 TLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAER 153
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNM-------------------------------- 132
D+ SWN M+ G+A+ G L+ +LF M
Sbjct: 154 DLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQ 213
Query: 133 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDL 192
R + + T+ A+ + L L K +H + IG+D D V + Y KC +
Sbjct: 214 RHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSI 273
Query: 193 KMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLS 252
A +F + R VVSW +M+ + ++ + ++ +G + T +L+
Sbjct: 274 GEARHIFDKTVD--RDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLN 331
Query: 253 SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
+ A G+ VH + GFD +TL+ MY+KCG+I +AR +F+G+ VS
Sbjct: 332 ACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVS 391
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYA 371
WT++ISGYAQ G DEAL+ F + +G PD +T + ++S C +G ++ G ++FD+
Sbjct: 392 WTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIK 451
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEA 430
GL LID+ S+ G + +A ++ +P E W +++ GC ++G A
Sbjct: 452 EKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLA 511
Query: 431 LDLFHQLMELDLR-PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
L E++ P T LA + A T L G A D +G+ P L
Sbjct: 512 KRAAEALFEIEPENPATYTTLANIYA---TAGLWGGVAEVRKVMDARGVVKKPGL 563
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/614 (32%), Positives = 310/614 (50%), Gaps = 41/614 (6%)
Query: 35 AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCA 94
HK+L L RQ + F+A + LI++ I H S V
Sbjct: 35 THKSLKLTRQSHSRILSLGLSQNSFLA------TKLIFAYAICQHPYHSRLV-------- 80
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
FD + ++V WN+++ G + +LF M + D T+ L++ +
Sbjct: 81 ---FDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSEL 137
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
L KS+H I G +D V N+ +S Y KC + + VF E +R SWN
Sbjct: 138 GALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVF--DEMTIRNSGSWNV 195
Query: 215 MVAG------CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ---GRL 265
++AG C + + ++ F + M + R D T+ SLL +C + + GR
Sbjct: 196 LIAGYAVSGNCNFRE---ETWEFVKQMQMDEVRPDAYTISSLLP--LCDGDMGKWDYGRE 250
Query: 266 VHSHGIH----YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+H + + G D DV + LI MYS+ + R +FD + R SWTAMI+GY
Sbjct: 251 LHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYV 310
Query: 322 QKGDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+ GD DEAL LF M+ G P+ V+++S++ C L G+ +A L + V
Sbjct: 311 ENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEV 370
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+CNALIDMYSKCGS+ AR +F K +SW++MI+G L+G+ EA+ L+ ++++
Sbjct: 371 SLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQ 430
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+RP+ +T + +L AC +G + +G I +D GI P L+ +C+ D+LGR G+
Sbjct: 431 AGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGI--EPTLEICACIVDMLGRAGQ 488
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L ALDF++++P++ +WG L+ IH ++E+ E L +LEP + + YV ++N
Sbjct: 489 LDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNL 548
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
YA RWD VA +R MMK +++K PG S IN KT F D+ H S Y +LD L
Sbjct: 549 YASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIYNMLDDL 608
Query: 620 ALHSREEAYSSHLK 633
L + S HL+
Sbjct: 609 LLTMNDAICSPHLE 622
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 264/508 (51%), Gaps = 43/508 (8%)
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT-VVSWNS 214
+L L H F + G+D D + + +I + C L + + R + +N+
Sbjct: 53 NLKHLHQTHCFMLSRGLDQDNILLSRFIEA---CSSLGFSHYSHSIFTHKTRPDIYLYNT 109
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++ + + +++ Y ++ + R D ++ +L + V A+ GR +H I G
Sbjct: 110 IIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTG 169
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGIC---------------------------- 306
D+ V+ LI MYS CG + AR LFDG+C
Sbjct: 170 LVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFE 229
Query: 307 ---DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+R +SWTA+I+GYAQ +EA+ +F M+ PD + +L+ +S C GALEL
Sbjct: 230 RMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALEL 289
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+W NY GL V + NALIDMY+KCG I A E+F + K V++WT+MI G AL
Sbjct: 290 GEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLAL 349
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISY-- 480
+G EAL++F + ++PN +TF+A+L AC H G +E G W + G Y
Sbjct: 350 HGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCM-----GTKYGI 404
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P++ HY CM DLLGR G L+EA + V+ MP +++A IWG+LL A +IH + E+G+
Sbjct: 405 KPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQ 464
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L K+EPH++ Y ++N YA +W+ +R +M+ VKK PG S +N + F
Sbjct: 465 HLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFV 524
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAY 628
A D+ H +SE + VL + L S+ Y
Sbjct: 525 AGDKLHPQSERIFEVLCKINLQSKIAMY 552
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 154/367 (41%), Gaps = 54/367 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
+N+ I+ N A + +LL+ ++ +D+ + + PF+ KA +L + + IH
Sbjct: 107 YNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAI 166
Query: 79 --------HIVKS----------------------------------PFVKCDRLDCAYK 96
H+V + + K +D A
Sbjct: 167 GTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARH 226
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F+ M R+V SW A++ G+AQM + +F M+L ++ D + ++ A H
Sbjct: 227 LFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGA 286
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L + +H++ G+ V + N I YAKC ++ A VF +E ++V++W SM+
Sbjct: 287 LELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEH--KSVITWTSMI 344
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ-GR-LVHSHGIHYG 274
G ++L + M N + + T V++LS+ C LV+ GR G YG
Sbjct: 345 DGLALHGLGREALEMFSCMERNRIKPNEITFVAILSA-CCHVGLVEMGRWYFKCMGTKYG 403
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLD---EAL 330
+ +I + + G + A+ L G+ W ++++ GD + +AL
Sbjct: 404 IKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQAL 463
Query: 331 RLFFAME 337
+ +E
Sbjct: 464 QHLIKVE 470
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 190/614 (30%), Positives = 298/614 (48%), Gaps = 19/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I +N + + R M+ E + TF + K A Q +H I+
Sbjct: 67 WNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC++L+ AY F ++ + SWNAM+ G+AQ G E
Sbjct: 127 KMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFW 186
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G + D T L A +L +H I G++ ++CN I+SY+
Sbjct: 187 LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYS 246
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A+ +F +R +V+WNS++A + D + M +GF D+ +
Sbjct: 247 KCGSLDDAKRIF-DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSY 305
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARVLFDGI 305
S++S+ GR +H I GF+ V + N LISMY K G + A +F+ +
Sbjct: 306 TSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESL 365
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ RVSW ++++G +Q G ++A++ F M +A D + +++ C +LG+
Sbjct: 366 EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQ 425
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
A GL+ N V ++LI MYSKCG I DAR F + ++W ++ G A +G
Sbjct: 426 QIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHG 485
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ ALDLF + ++ + +TF+AVL AC+H G +E+G D G+ P ++
Sbjct: 486 QCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVP--PRME 543
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C DL GR G+L+EA ++ MP K D +W T L AC+ NIE+ VA L ++
Sbjct: 544 HYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEM 603
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP YV ++N Y RWD A ++ +MK VKK PG S +N F A+D
Sbjct: 604 EPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHS 663
Query: 606 HAESELTYPVLDCL 619
H + Y +L+ L
Sbjct: 664 HPSCQQIYFLLEVL 677
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 182/392 (46%), Gaps = 9/392 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC L A +FDEM +RD SWN M+ G G LE + MR G + D T
Sbjct: 43 YWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTF 102
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + A L + VHS I +G +V + + YAKC+ L+ A L F I +
Sbjct: 103 GSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISK 162
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
VSWN+M+ G + + M G ++D T LL +
Sbjct: 163 --HNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTS 220
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD---GICDRTRVSWTAMISGYA 321
+H I +G +L ++ N LI+ YSKCG +D A+ +FD GI R V+W ++++ Y
Sbjct: 221 QLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGI--RDLVTWNSLLAAYL 278
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ D A +L M+ G PDL + S+IS C G+ G + +V
Sbjct: 279 LRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVP 338
Query: 382 VCNALIDMYSKC--GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ NALI MY K GS+ +A +F +L K VSW +++ G + G +A+ F +
Sbjct: 339 ISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRS 398
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
+ + +F AVL++C+ + G I ++
Sbjct: 399 AAMDIDHYSFSAVLRSCSDLATFQLGQQIHVL 430
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 172/363 (47%), Gaps = 9/363 (2%)
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
HS + +G ADV CN ++ Y KC +L+ A+++F E +R VSWN+M+AG
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLF--DEMPMRDSVSWNTMIAGHINCG 78
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
+ S + R M GF LD T S+L G+ VHS I G+ +V +
Sbjct: 79 NLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MY+KC ++ A + F I VSW AMI+GYAQ GD + A L ME GE
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T ++ + L GL+ +CNALI YSKCGS+ DA+ +F
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 404 YALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
+ + +V+W +++A L + A L + E P+ ++ +++ AC +
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318
Query: 463 EKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
G ++ +I+ +G + + + L G +KEAL +S+ K D W
Sbjct: 319 NNGRSLHGLVIK---RGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFK-DRVSWN 374
Query: 521 TLL 523
++L
Sbjct: 375 SIL 377
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 118/269 (43%), Gaps = 7/269 (2%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL L HS + G DV N +++ Y KC ++ SA VLFD + R VSW MI+
Sbjct: 13 ALANLLLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIA 72
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
G+ G+L+ + + M + G D T SM+ G +G LG+ + G +
Sbjct: 73 GHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAE 132
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
NV +AL+DMY+KC + DA F ++ + VSW MI G A G+ A L +
Sbjct: 133 NVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCME 192
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL--GR 496
+ + + T+ +L F Q K I + EL + C A + +
Sbjct: 193 QEGEKVDDGTYAPLLPLLDDADFCNL-----TSQLHGKIIKHGLELVNTMCNALITSYSK 247
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
G L +A S D W +LL A
Sbjct: 248 CGSLDDAKRIFDSSAGIRDLVTWNSLLAA 276
>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
Length = 917
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/606 (30%), Positives = 309/606 (50%), Gaps = 31/606 (5%)
Query: 6 LPPRLNRIYRSS---TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
+P +++ S+ + WN+ I+ V + L + RQM+ + +P+ T I
Sbjct: 317 MPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN-QPDVATLVTIVS 375
Query: 63 ACAKLSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVA 107
CA L + +HG++++ ++KCD A +F M RD+
Sbjct: 376 GCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLI 435
Query: 108 SWNAMLVGFAQMGFL-ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
SWN M+ G+++ G L E +F + G T++ + + + LS K++HSF
Sbjct: 436 SWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEELSFGKALHSF 495
Query: 167 GIHIG-VDADVSVCNTWISSYAKCDDLKMAELVFCGIEE--RLRTVVSWNSMVAGCTYGD 223
+ G + VS N I Y C D A F IE + ++SWN+++ GC +
Sbjct: 496 SLKCGFTSSGVSAVNALIHMYMSCGDPLAA---FSLIERIIPVSDIISWNTVIVGCLQNE 552
Query: 224 KFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
D+L +R M + D T+VS+LS+ L G+ +H + + F ++ V
Sbjct: 553 LHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVK 612
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N+L++MY + GD SA ++F + D SW MISG+AQ AL+ + ME
Sbjct: 613 NSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKMEDFE-- 670
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ ++V+ +I C Q G GK + L +NV + +L+DMY KCG + A +
Sbjct: 671 PNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRV 730
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F A EK + W ++I+ +G ++++DLF ++ + ++ + TF+A+L AC+H+G +
Sbjct: 731 FEASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLSACSHSGLV 790
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
++GW + + GI+ PE H+ C+ D+LGR G+L+EA FV+S+P + GIWG L
Sbjct: 791 DEGWKYYCLMSEKFGITPAPE--HHVCIVDMLGRAGRLQEAHKFVESLPSQQTHGIWGAL 848
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L AC +++GE +A L LEP ++ YV AN YA W GVA +R++++ +
Sbjct: 849 LNACSSRSELKMGESIAKHLLHLEPGNSGYYVTAANLYAYKDMWSGVAQVRSVLQDKGLV 908
Query: 583 KFPGQS 588
K G+S
Sbjct: 909 KPHGRS 914
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 212/470 (45%), Gaps = 26/470 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + LFR+M + E ++ T + ++ +L +HG
Sbjct: 130 WNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHGMAA 189
Query: 82 KS---------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
KS + KC A +F M RD SWN+++ G G E
Sbjct: 190 KSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSA 249
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGVD--ADVSVCNTWI 183
F M Q D V++ + A L S +SVHS + +G + A SV N+ +
Sbjct: 250 CYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLV 309
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y++ + A+ VF R +VSWN+M+ G ++ ++L R M + D
Sbjct: 310 TFYSEFGMPEAAKKVFA--SNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN-QPD 366
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLF 302
V T+V+++S L +G +H + I G + S+ N+L+ +Y KC + +A +LF
Sbjct: 367 VATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLF 426
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFF-AMEAAGELPDLVTVLSMISGCGQSGAL 361
+ R +SW MISGY++ G L E +L F + + G L T+L++I C L
Sbjct: 427 MTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEEL 486
Query: 362 ELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELF-YALPEKIVVSWTTMIA 419
GK +++ G + V NALI MY CG A L +P ++SW T+I
Sbjct: 487 SFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIV 546
Query: 420 GCALNGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
GC N +AL++F + L + P+ +T ++VL AC L G +I
Sbjct: 547 GCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSI 596
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 5/261 (1%)
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
V+ WN+ V T ++DD+ +R M D TTVV +LS L +G +H
Sbjct: 127 VILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHG 186
Query: 269 HGIHYGFDLD-VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ N L+ MY+KCG+ SA V+F + R SW ++ISG G +
Sbjct: 187 MAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAE 246
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNV--MVCN 384
+ F M + PD V++ S++S C + L G+ + A G +D V N
Sbjct: 247 VSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVAN 306
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+L+ YS+ G A+++F + + +VSW MI G N EAL + Q M L+ +P
Sbjct: 307 SLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQ-MRLENQP 365
Query: 445 NRVTFLAVLQACTHTGFLEKG 465
+ T + ++ C G L +G
Sbjct: 366 DVATLVTIVSGCADQGLLSEG 386
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/634 (30%), Positives = 318/634 (50%), Gaps = 47/634 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V N L +F++M++ + + + + K+CA L DL +H H +
Sbjct: 250 WSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHAL 309
Query: 82 KSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS FVK C+ + A ++FD ++ S+NAM+ G++Q L
Sbjct: 310 KSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALL 369
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + + D +++ G +A K LS +H ++ V N +I Y
Sbjct: 370 LFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYG 429
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC+ L A VF E + VSWN+++A ++ +LN M+ +G D T
Sbjct: 430 KCEALDEACRVF--DEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTF 487
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD---- 303
S+L + ++L G +H+ + G + + ++L+ MYSKCG ID A + +
Sbjct: 488 GSVLKA-CAGDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFI 546
Query: 304 -------------------GICDRTR----VSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
GI DR VSW A+ISGY + ++A R F M G
Sbjct: 547 GIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMG 606
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
PD T +++ C ++ LGK + L+ +V +C+ L+DMYSKCG++ D+R
Sbjct: 607 ITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSR 666
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F P + V+W MI G A +G EA+ LF ++ +++ PN TF+++L+AC H G
Sbjct: 667 LMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMG 726
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+E+G + + G+ +P L+HYS M D+LG+ G++++AL+ +Q MP ++D IW
Sbjct: 727 LVERGLDYFHMMKKEYGL--DPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWR 784
Query: 521 TLLCACKIH-LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
TLL ACKI+ N+E E A L +L+P ++ Y+ ++N YA G WD + +RT M+ +
Sbjct: 785 TLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSD 844
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTY 613
++KK PG S I + TF D+ H + Y
Sbjct: 845 KLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIY 878
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/551 (23%), Positives = 243/551 (44%), Gaps = 52/551 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + E +++ +F +M ++ +E +N +F I K C+ L + IHG +
Sbjct: 149 WNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIAL 208
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC RLD ++ +F M ++ SW+A++ G Q FL+ L+
Sbjct: 209 RMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLK 268
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ VG+ + ++ L L +H+ + D V + YA
Sbjct: 269 MFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYA 328
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC++++ A+ +F + E L + S+N+M+ G + D +L +R + + D ++
Sbjct: 329 KCNNMQDAQRLF-DMSENL-NLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISL 386
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
L + + L +G +H F ++ V N I MY KC +D A +FD +
Sbjct: 387 SGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGR 446
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW A+I+ + Q + + L + +M +G PD T S++ C +L G
Sbjct: 447 KDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEI 505
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-------------PEKI---- 410
G+ N + ++L+DMYSKCG I +A ++ + PE I
Sbjct: 506 HTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPK 565
Query: 411 ----------VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+VSW +I+G + + +A F+++ME+ + P++ T+ VL C +
Sbjct: 566 GIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLA 625
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGI 518
+ G I I + D Y C + D+ + G L ++ + PI+ D
Sbjct: 626 SIGLGKQIHA-----HVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIR-DFVT 679
Query: 519 WGTLLCACKIH 529
W ++C H
Sbjct: 680 WNAMICGYAHH 690
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 218/495 (44%), Gaps = 55/495 (11%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEM 101
F F+ K CAK + H H++ S F + C L A K+FD M
Sbjct: 51 NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110
Query: 102 AVRDVASWNAMLVGFAQM--------------------------GFL---ENV--LRLFY 130
+RDV SWNAM+ G+A GFL EN+ +++F
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M G++ D + + + ++ L +H + +G D DV + + YAKC
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
L + VF + ++ +SW++++AGC + D L ++ M G + + S+
Sbjct: 231 RLDESFTVFYAMPQK--NWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASV 288
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L S L G +H+H + F D V + MY+KC ++ A+ LFD +
Sbjct: 289 LKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNL 348
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
S+ AMI+GY+QK + AL LF + + D +++ + C L G
Sbjct: 349 QSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGL 408
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
A N+ V NA IDMY KC ++ +A +F + K VSW +IA N E +
Sbjct: 409 ATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKT 468
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYS 488
L++ ++ + P+ TF +VL+AC L G I +I++ G++ NP + S
Sbjct: 469 LNILVSMLRSGMEPDEYTFGSVLKACAGDS-LNHGMEIHTTIVKL---GMASNPYIG--S 522
Query: 489 CMADLLGRKGKLKEA 503
+ D+ + G + EA
Sbjct: 523 SLVDMYSKCGMIDEA 537
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 215/457 (47%), Gaps = 42/457 (9%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL + + + +N+ I K+ + LLLFR++ ++ + + ++ +ACA +
Sbjct: 338 RLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVK 397
Query: 69 DLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L +HG KS F KC+ LD A ++FDEM +D SWNA++
Sbjct: 398 GLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIA 457
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
Q L + +M G++ D T G A L+ +H+ + +G+ +
Sbjct: 458 AHEQNEERSKTLNILVSMLRSGMEPDEYT-FGSVLKACAGDSLNHGMEIHTTIVKLGMAS 516
Query: 175 DVSVCNTWISSYAKCDDLKMAE----LVFCGI--------------------EERLRT-V 209
+ + ++ + Y+KC + AE +F GI + R++ +
Sbjct: 517 NPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMI 576
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWN++++G + +D+ F+ MM G D T ++L + ++ G+ +H+H
Sbjct: 577 VSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAH 636
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I DV + +TL+ MYSKCG++ +R++F+ R V+W AMI GYA G +EA
Sbjct: 637 VIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEA 696
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALID 388
++LF +M +P+ T +S++ C G +E G +F GL + + ++D
Sbjct: 697 IKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVD 756
Query: 389 MYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+ K G + A EL +P E V W T+++ C +N
Sbjct: 757 ILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKIN 793
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 41/206 (19%)
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C + A ELGK + G + V V N L+ +Y CG++G A +LF +P + VVSW
Sbjct: 59 CAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSW 118
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG--------FLEKGW 466
MI G A + + V A F + D+ V++ ++L TG F+E G
Sbjct: 119 NAMIFGYAASNDMVRASLCFEMMPTRDV----VSWNSMLSGFLQTGENLESVKVFIEMGR 174
Query: 467 AISIIQYDDKGIS--------------------------YNPELDHYSCMADLLGRKGKL 500
S +++D+K S Y+ ++ S + D+ + +L
Sbjct: 175 --SGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRL 232
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCAC 526
E+ +MP K+ W ++ C
Sbjct: 233 DESFTVFYAMPQKNWIS-WSAIIAGC 257
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 270/524 (51%), Gaps = 4/524 (0%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F ++ ++ WN M+ G ++ + L+ +MR G + T+ + +A
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L +HS + G D DV V + +S Y KCD+ A VF I ++ VVSW +++
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK--NVVSWTAII 187
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G F +++ ++ ++ G + D ++V +L++ G + + G
Sbjct: 188 TGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG 247
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+V V +L+ MY KCG+++ A ++F + ++ VSW+ MI GYA G +AL LFF M
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQM 307
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
++ PD T++ ++S C GAL+LG W + N ++ ALIDMYSKCGS+
Sbjct: 308 QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
A E+F A+ K V W M+ G ++NG LF + + +RP+ TF+ +L C
Sbjct: 368 TQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
TH GF+ +G + S P ++HY CM DLLGR G L EA + +MP+K +A
Sbjct: 428 THGGFVNEG--RQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNA 485
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
+WG LL CK+H + + E V L +LEP ++ YV+++N Y+ RW+ IR+ M
Sbjct: 486 VVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTM 545
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
K Q++K S I+G F D+ H SE Y LD L
Sbjct: 546 KEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELG 589
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 204/395 (51%), Gaps = 13/395 (3%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
LK +H+ + + +D D + N + ++LVF ++E + WN+M+ G
Sbjct: 32 LKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEP--NIFLWNTMIRGL 89
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
D FDD+++ Y M GF + T+ +L + + G +HS + G+D DV
Sbjct: 90 VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V +L+S+Y KC + D A +FD I D+ VSWTA+I+GY G EA+ F +
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G PD +++ +++ C + G G+W D Y G+ NV V +L+DMY KCG++ A
Sbjct: 210 GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+F A+PEK +VSW+TMI G A NG +ALDLF Q+ +L+P+ T + VL AC
Sbjct: 270 NLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATL 329
Query: 460 GFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
G L+ G WA S++ D NP L + + D+ + G + +A + +M + D +
Sbjct: 330 GALDLGIWASSLM--DRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFTAMK-RKDRVV 384
Query: 519 WGTLLCACKIHLNIEIGEYVAYCLFKL-EPHSAAP 552
W ++ + L++ + LF L E H P
Sbjct: 385 WNAMM----VGLSMNGHAKAVFSLFSLVEKHGIRP 415
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 206/443 (46%), Gaps = 18/443 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ I WN+ IR V+K+ + L+ M+ PNN T PF+ KACA+ D+
Sbjct: 75 KEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGL 134
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH +VK S +VKCD D A K+FD++ ++V SW A++ G+ G
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ F + +G++ D +++ + A + + + + G+ +V V
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ + Y KC +L+ A L+F + E + +VSW++M+ G + +L+ + M
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPE--KDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ D T+V +LS+ AL G S F + + LI MYSKCG + A
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F + + RV W AM+ G + G LF +E G PD T + ++ GC G
Sbjct: 373 IFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 361 LELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMI 418
+ G+ +F+N L ++ ++D+ + G + +A +L +P K V W ++
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 419 AGCALNGEFVEALDLFHQLMELD 441
GC L+ + A + +L+EL+
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELE 515
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/629 (28%), Positives = 322/629 (51%), Gaps = 21/629 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
++ S I WN I +L + K +++ + +F AC +
Sbjct: 197 FKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEF 256
Query: 70 LIYSQMIHGHIVK-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ + + +H +K P+V KC ++ A K+F+E+ +++ WNA++
Sbjct: 257 VSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISA 316
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ G+ + LR++ M+L + +D T++ + ++ A L + +H+ + + +
Sbjct: 317 YVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSS 376
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+++ + ++ Y+K D A +F ++ER VV+W S+++G K+ ++L+F+R M
Sbjct: 377 ITIQSALLTMYSKFGDSNYANSIFSTMKER--DVVAWGSVISGFCQNRKYKEALDFFRAM 434
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ + D + S++S+ E + G +H I G LDV V ++L+ MYSK G
Sbjct: 435 EADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFP 494
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ A +F + + V+W ++IS Y + D ++ LF + PD V+ S+++
Sbjct: 495 ERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAI 554
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
AL GK Y + ++ V N LIDMY KCG + A+ +F + EK +V+W
Sbjct: 555 SSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWN 614
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+MI G +GE +A++LF ++ ++P+ VTFL++L +C H+G +E+G + +
Sbjct: 615 SMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMK 674
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
GI P ++HY + DL GR G L +A FV++MP++ D IW +LLC+CKIHLN+E+G
Sbjct: 675 FGI--EPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELG 732
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E VA L +EP + YV++ N Y WD AN+R MK +KK PG S + K
Sbjct: 733 EMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNK 792
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSR 624
F + D S +T + D L+ R
Sbjct: 793 VDVFYSGD---CSSPITTEIYDTLSSLKR 818
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 251/529 (47%), Gaps = 54/529 (10%)
Query: 25 QIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP 84
+I+ V + + + L L+ ++ + T+P + KACA LS+L Y + IH I+ +
Sbjct: 27 EIKSLVQQRQYIEALKLY---TKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTG 83
Query: 85 --------------FVKCDRLDCAYKIFDEM-----AVRDVASWNAMLVGFAQMGFLENV 125
+VKC A K+FD++ +V DV WN+++ G+ + G LE
Sbjct: 84 LHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEG 143
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ F M+ G + K +HS+ + ++ D + I +
Sbjct: 144 MVQFGRMQSSGYKEG--------------------KQIHSYIVRNMLNFDPFLETALIDT 183
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC A +F +++R +V+WN M+ G +++SL +Y ++ +
Sbjct: 184 YFKCGRPTEARYLFKKLKDR-SNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSS 242
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+ LS+ E + G+ VH I GF+ D V +L++MY KC I+SA +F+ +
Sbjct: 243 SFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEV 302
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
D+ W A+IS Y G +ALR++ M+ L D T+L++++ +G +LG+
Sbjct: 303 PDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGR 362
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
L+ ++ + +AL+ MYSK G A +F + E+ VV+W ++I+G N
Sbjct: 363 LIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNR 422
Query: 426 EFVEALDLFHQLMELDL-RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
++ EALD F + ME DL +P+ +++ ACT ++ G I I +L
Sbjct: 423 KYKEALDFF-RAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFV-----IKSGLQL 476
Query: 485 DHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL-CACKIHL 530
D + S + D+ + G + A + MP+K+ W +++ C C+ +L
Sbjct: 477 DVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVA-WNSIISCYCRNNL 524
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 264/450 (58%), Gaps = 6/450 (1%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+++H+ + D+ + N ++ YAKC L+ A+ +F + + +VSW +++G +
Sbjct: 125 RAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTK--DMVSWTVLISGYS 182
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+ ++L + M++ GF+ + T+ SLL + + GR +H+ + YG+D++V
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V ++L+ MY++ + A+V+F+ + + VSW A+I+G+A+KG+ + +RLF M G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQG 302
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
P T S+++ C SG+LE GKW + G + + N LIDMY+K GSI DA+
Sbjct: 303 FEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAK 361
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++F L ++ +VSW ++I+G A +G EAL LF Q+++ ++PN +TFL+VL AC+H+G
Sbjct: 362 KVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 421
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
L++G + K ++ H+ + DLLGR G+L EA F++ MPIK A +WG
Sbjct: 422 LLDEGQYYFELMKKHK---IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWG 478
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
LL AC++H N+++G Y A +F+L+PH + P+V ++N YA GR A +R MMK +
Sbjct: 479 ALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESG 538
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
VKK P S I + F A D H E
Sbjct: 539 VKKEPACSWVEIENEVHVFVANDDSHPMRE 568
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 195/407 (47%), Gaps = 18/407 (4%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAY 95
+EP + + C L L + IH HI S F KC L+ A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
+FD+M +D+ SW ++ G++Q G L LF M +G Q + T+ L +A+
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ +H+F + G D +V V ++ + YA+ ++ A+++F + + VVSWN++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA--KNVVSWNAL 278
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+AG + + + + M+ GF T S+L+ +L QG+ VH+H I G
Sbjct: 279 IAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLAC-ASSGSLEQGKWVHAHVIKSGG 337
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+ NTLI MY+K G I A+ +F + + VSW ++ISGYAQ G EAL+LF
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 397
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M A P+ +T LS+++ C SG L+ G+++ ++ V ++D+ + G
Sbjct: 398 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 457
Query: 396 IGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELD 441
+ +A + +P K + W ++ C ++ + Q+ ELD
Sbjct: 458 LNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELD 504
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 147/272 (54%), Gaps = 9/272 (3%)
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L QGR +H+H F+ D+ ++N +++MY+KCG ++ A+ LFD + + VSWT +ISG
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y+Q G EAL LF M G P+ T+ S++ G + G+ ++ G N
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V V ++L+DMY++ + +A+ +F +L K VVSW +IAG A GE + LF Q++
Sbjct: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLR 300
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKG-WAIS-IIQYDDKGISYNPELDHYSCMADLLGRK 497
P T+ +VL AC +G LE+G W + +I+ + I+Y + + D+ +
Sbjct: 301 QGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIG-----NTLIDMYAKS 354
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G +K+A + + +K D W +++ H
Sbjct: 355 GSIKDAKKVFRRL-VKQDIVSWNSIISGYAQH 385
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 22/323 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I +A + L LF +M +PN T + KA + + +H +
Sbjct: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSL 233
Query: 82 KSPF-----VKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + V LD A IF+ +A ++V SWNA++ G A+ G E+V+R
Sbjct: 234 KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMR 293
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G + T + A + L K VH+ I G + NT I YA
Sbjct: 294 LFXQMLRQGFEPTHFTYSSVLACA-SSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYA 352
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
K +K A+ VF RL + +VSWNS+++G ++L + M+ + +
Sbjct: 353 KSGSIKDAKKVF----RRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEI 408
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T +S+L++ L +G+ + + V+ T++ + + G ++ A + +
Sbjct: 409 TFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM 468
Query: 306 CDR-TRVSWTAMISGYAQKGDLD 327
+ T W A++ ++D
Sbjct: 469 PIKPTAAVWGALLGACRMHKNMD 491
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 70/113 (61%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ M++ C L+ G+ + S +D++++ N +++MY+KCGS+ +A++L
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
F +P K +VSWT +I+G + +G+ EAL LF +++ L +PN T ++L+A
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 215
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ + WN+ I K E + LF QM + EP + T+ + ACA L +
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKW 327
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H H++KS + K + A K+F + +D+ SWN+++ G+AQ G
Sbjct: 328 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 387
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+LF M +Q + +T + + A H+
Sbjct: 388 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHS 420
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL-------- 70
I WNS I + L LF QM + ++PN +TF + AC+ L
Sbjct: 372 IVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE 431
Query: 71 ------IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVAS-WNAML 113
I +Q+ H V + RL+ A K +EM ++ A+ W A+L
Sbjct: 432 LMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 481
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 308/587 (52%), Gaps = 52/587 (8%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF---LENVLRLFYNMRLVGIQADF 141
+ K + L A+K+FD++ +++ SWNAML+G++ N+L + ++ D
Sbjct: 79 YSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDN 138
Query: 142 VTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T+ + +A ++ L K V F + G D+D+ V N I+ Y++CD+ +A ++F
Sbjct: 139 FTITCVLKALSVLFPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFD 198
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPEA 259
+ + R +VSWNSM+AG + G ++D YR M+ G R + TVVS+L +
Sbjct: 199 RMHD--RDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTND 256
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
LV G VH I ++DVS N+LI +Y+KCG +D AR LF+ + ++ V++ +++SG
Sbjct: 257 LVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSG 316
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS----GALEL------------ 363
Y G +D+A+ LF M+ P L T ++ISG Q+ G LEL
Sbjct: 317 YMTHGFVDKAMDLFREMKN----PRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPN 372
Query: 364 -------------------GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
GK YA G N+ V ++ID Y+K G + A+ +F
Sbjct: 373 AVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFD 432
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
++ ++ WT +I+ + +G+ AL LF ++ +P+ VTF AVL AC H+G + +
Sbjct: 433 QSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNE 492
Query: 465 GWAISIIQYDDKGISY--NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
W I +D+ + Y P ++HY+CM +L R G L EA +F+ MPI+ +A +WG L
Sbjct: 493 AWKI----FDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGAL 548
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L + ++E+G++V LF +EP + YV MAN Y+ GRW+ NIR MK+ +K
Sbjct: 549 LNGVSVSGDVELGKFVCDHLFNMEPENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLK 608
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
K PG S +G +F A D SE Y +L+ L REE Y+
Sbjct: 609 KIPGTSWIETSGGLRSFIARDVSSERSEEIYGMLEGLLGLMREEGYT 655
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 198/423 (46%), Gaps = 47/423 (11%)
Query: 51 EPNNLTFPFIAKACAKL-SDLIYSQMIHGHIVKSPF--------------VKCDRLDCAY 95
+P+N T + KA + L D I ++ + +++ F +CD A
Sbjct: 135 KPDNFTITCVLKALSVLFPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIAR 194
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHA 154
+FD M RD+ SWN+M+ G++Q GF E+ L+ M G++ + VTV+ + QA
Sbjct: 195 ILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQT 254
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI------------ 202
L VH F I V+ DVS N+ I YAKC L A +F +
Sbjct: 255 NDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIV 314
Query: 203 -----------------EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
E + + +WN++++G + + L + M GFR +
Sbjct: 315 SGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAV 374
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ S+L +F C L G+ +H++ I G+ ++ V ++I Y+K G + A+ +FD
Sbjct: 375 TLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQS 434
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELG 364
DR+ + WTA+IS Y+ GD + ALRLF M + G PD VT ++++ C SG + E
Sbjct: 435 KDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAW 494
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCAL 423
K FD G + V ++ + S+ G + +A E +P E W ++ G ++
Sbjct: 495 KIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSV 554
Query: 424 NGE 426
+G+
Sbjct: 555 SGD 557
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 184/365 (50%), Gaps = 9/365 (2%)
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D+ L Q + L K +H+ + + D + + I+ Y+K + L A VF
Sbjct: 33 DYGAFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVF 92
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF---RLDVTTVVSLLS--SF 254
I ++ + SWN+M+ G + + +LN ++ + + D T+ +L S
Sbjct: 93 DKILDK--NIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSV 150
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
+ P++++ + V + +GFD D+ V+N LI+ YS+C + AR+LFD + DR VSW
Sbjct: 151 LFPDSIL-AKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWN 209
Query: 315 AMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
+MI+GY+Q G ++ L+ M ++ G P+ VTV+S++ C Q+ L G +
Sbjct: 210 SMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIE 269
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
++ +V N+LI +Y+KCGS+ ARELF + K V++ ++++G +G +A+DL
Sbjct: 270 RKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDL 329
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADL 493
F ++ L ++Q + G LE + + ++ + L +SC ++L
Sbjct: 330 FREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNL 389
Query: 494 LGRKG 498
G K
Sbjct: 390 KGGKA 394
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L Q + +H+ + D + + LI+ YSK + A +FD I D+ SW AM+ G
Sbjct: 50 LRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIG 109
Query: 320 YAQKG---DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE-LGKWFDNYACSGG 375
Y+ L + PD T+ ++ L K + G
Sbjct: 110 YSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLRHG 169
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
++ V NALI YS+C G AR LF + ++ +VSW +MIAG + G + + +L+
Sbjct: 170 FDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYR 229
Query: 436 QLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++++ LRPN VT ++VLQAC T L G + + K ++ ++ + L
Sbjct: 230 KMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERK---VEMDVSAHNSLIGLY 286
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G L A + M K D +G+++ H
Sbjct: 287 AKCGSLDYARELFNEMSNK-DEVTYGSIVSGYMTH 320
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 154/357 (43%), Gaps = 50/357 (14%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WNS I L+R+M + PN +T + +ACA+ +DL++ +H
Sbjct: 205 IVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVH 264
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRD------------------ 105
I++ + KC LD A ++F+EM+ +D
Sbjct: 265 QFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVD 324
Query: 106 -------------VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAI 152
+++WNA++ G Q E +L L M+ G + + VT+ +
Sbjct: 325 KAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFS 384
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+L K++H++ I G ++ V + I +YAK L+ A+ VF + + R+++ W
Sbjct: 385 CFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVF--DQSKDRSLIVW 442
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHSHGI 271
++++ + + +L + M+ NG + D T ++L++ + + ++ +
Sbjct: 443 TAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFL 502
Query: 272 HYGFDLDVSVINTLISMYSKCGDI-DSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
YGF V ++ + S+ G + ++A + + W A+++G + GD++
Sbjct: 503 KYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVE 559
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L R ++ ++ WN+ I V N L L ++M++ PN +T I + S+
Sbjct: 329 LFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSN 388
Query: 70 LIYSQMIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + IH + +++ + K L A +FD+ R + W A++
Sbjct: 389 LKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISA 448
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
++ G LRLF +M G Q D VT + A H+
Sbjct: 449 YSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHS 487
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 305/590 (51%), Gaps = 37/590 (6%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWN 110
+PN+L I+ L D YS +I HI P D A+ I M +W+
Sbjct: 51 KPNHLLSQSIS-----LKDFTYSTLIFSHITPHPN------DYAFNI---MLRATTTTWH 96
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
+ L L++ M+ + I + T + A + + + + + H +
Sbjct: 97 DYPL----------TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKL 146
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSL 229
G+D D N+ ++ Y +C + +A VF I E+ +VSWNS+++G G +
Sbjct: 147 GLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEK--DLVSWNSLLSGYAKLGFAREAVE 204
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLIS 287
F R +GF D ++VS+L + C E L GR V + G ++ + + LIS
Sbjct: 205 VFGRLREESGFEPDEMSLVSVLGA--CGELGDLELGRWVEGFVVERGMKVNSYIGSALIS 262
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSKCG++ S+R +FDG+ R ++W A IS YAQ G DEA+ LF +M+ G P+ VT
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVT 322
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ +++S C GAL+LGK D YA GL+ ++ V ALIDMY+KCGS+ A+ +F +P
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP 382
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNRVTFLAVLQACTHTGFLEKG 465
K SW MI+ A +G+ EAL LF ++ + RPN +TF+++L AC H G +++G
Sbjct: 383 RKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEG 442
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + + G+ P+++HYSCM DLL R G L EA D ++ MP K D G L A
Sbjct: 443 YRLFDMMSTLFGLV--PKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSA 500
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C+ N++IGE V L +L+P ++ Y+ + Y WD A +R +M+ N V K P
Sbjct: 501 CQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTP 560
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
G S + + F + D +S ++D L ++E Y S+ WI
Sbjct: 561 GCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELKKEGYLSY--WI 608
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 202/390 (51%), Gaps = 20/390 (5%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------S 83
TL L+ QMK +I PNN TFPF+ ACA L ++ +++ H + K +
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR-LVGIQADFV 142
+ +C A K+FDE+ +D+ SWN++L G+A++GF + +F +R G + D +
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+++ + A L L + V F + G+ + + + IS Y+KC +L + +F G+
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R ++WN+ ++ D++++ + M NG + T+ ++LS+ AL
Sbjct: 281 PS--RDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ + + H G D+ V LI MY+KCG ++SA+ +F+ + + SW AMIS A
Sbjct: 339 GKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALAS 398
Query: 323 KGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 379
G EAL LF M E P+ +T +S++S C +G ++ G + FD + GL
Sbjct: 399 HGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 458
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEK 409
+ + ++D+ S+ G + +A ++ +PEK
Sbjct: 459 IEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------I 71
WN+ I A + + LF MK+N ++PN +T + ACA + L
Sbjct: 288 WNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYAT 347
Query: 72 YSQMIHGHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + H V + + KC L+ A ++F++M ++ ASWNAM+ A G + L
Sbjct: 348 HRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALS 407
Query: 128 LFYNMRLVGIQA--DFVTVMGLTQAAIHA 154
LF M G A + +T + L A +HA
Sbjct: 408 LFERMSDEGGSARPNDITFVSLLSACVHA 436
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 260/464 (56%), Gaps = 39/464 (8%)
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
SYA L + VF +E V S+++++ FD + +Y M+ G +
Sbjct: 88 SYAALGRLDCSVFVFNTFDEP--NVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNA 145
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV----------------------- 281
T S+L S C +L G+++H I G D+ V
Sbjct: 146 FTFSSVLKS--C--SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDK 201
Query: 282 --------INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
+ T+++ YSK G++D AR LF+G+ +R V W MI GYAQ G +E+L+LF
Sbjct: 202 MPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLF 261
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M A +P+ VTVL+++S CGQ GALE G+W +Y + G++ NV V ALIDMYSKC
Sbjct: 262 RRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKC 321
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
GS+ DAR +F + +K VV+W +MI G A++G AL LF ++ E +P +TF+ +L
Sbjct: 322 GSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGIL 381
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H G +E+G + + D GI P+++HY CM +LLGR G L+EA V++M I
Sbjct: 382 SACGHGGLVEEGRSFFRLMRDKYGI--EPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIA 439
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+D +WGTLL C++H+NI++GE +A L + ++ YV ++N YA G W+GVA +R
Sbjct: 440 ADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMR 499
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
T+MK + ++K G S ++ K F A +R H +S+ Y +L+
Sbjct: 500 TLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLN 543
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 180/395 (45%), Gaps = 55/395 (13%)
Query: 71 IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+Y I ++ + RLDC+ +F+ +V S++A++ Q + +
Sbjct: 75 LYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYS 134
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M G++ + T + ++ L K +H I +G+ +D+ V + YA+
Sbjct: 135 QMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGG 190
Query: 191 DL--------------------------KMAEL-----VFCGIEERLRTVVSWNSMVAGC 219
D+ KM EL +F G++ER VV WN M+ G
Sbjct: 191 DVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKER--DVVCWNVMIGGY 248
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
++SL +R M+ + TV+++LS+ AL GR +HS+ + G ++V
Sbjct: 249 AQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINV 308
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V LI MYSKCG ++ AR++FD I D+ V+W +MI GYA G AL+LF M
Sbjct: 309 HVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTET 368
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDMYSKCG 394
G P +T + ++S CG G +E G+ F D Y G++ + ++++ + G
Sbjct: 369 GHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKY----GIEPKIEHYGCMVNLLGRAG 424
Query: 395 SIGDARELFYALPEKIVVS-----WTTMIAGCALN 424
+ +A Y L + + ++ W T++ C L+
Sbjct: 425 HLEEA----YGLVKNMTIAADPVLWGTLLGCCRLH 455
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I +++L LFR+M PN +T + AC +L L + IH +I
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ KC L+ A +FD + +DV +WN+M+VG+A GF ++ L+
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M G + +T +G+ A H
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHG 387
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/632 (29%), Positives = 312/632 (49%), Gaps = 36/632 (5%)
Query: 20 NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
N++N Q+ E LF M+ P+ T + A A + IH
Sbjct: 181 NRFNDQVWE------------LFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHAL 228
Query: 80 IVKSPFVKCDRLDC---------------AYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+VK F + +RL C A +FD M +D SWN+M+ G G
Sbjct: 229 VVKLGF-ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLE 287
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
F NM+L G + T + ++ K L L++ +H + G+ + +V +
Sbjct: 288 AFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMV 347
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+ KC ++ A +F + +++VVSW +M++G D ++N + M G + +
Sbjct: 348 ALTKCKEIDDAFSLF-SLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNH 406
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T ++L+ + V +H+ I ++ SV L+ + K G+I A +F+
Sbjct: 407 FTYSTILTV----QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFEL 462
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC-GQSGALEL 363
I + ++W+AM++GYAQ G+ +EA ++F + G P+ T S+I+ C + ++E
Sbjct: 463 IETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQ 522
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK F YA L + + V ++L+ +Y+K G+I A E+F E+ +VSW +MI+G A
Sbjct: 523 GKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQ 582
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G+ +AL++F ++ + +L + +TF+ V+ AC H G + KG I +D I NP
Sbjct: 583 HGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHI--NPT 640
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HYSCM DL R G L +A+D + MP A +W +L A ++H NIE+G+ A +
Sbjct: 641 MEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKII 700
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
LEP +A YV ++N YA G W N+R +M + +VKK PG S + KT +F A D
Sbjct: 701 SLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGD 760
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
H S+ Y L L R+ Y ++
Sbjct: 761 LSHPLSDHIYSKLSELNTRLRDVGYQPDTNYV 792
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 247/517 (47%), Gaps = 34/517 (6%)
Query: 33 NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV------ 86
++ + L LF + ++ + P++ T + CA + + +H VK V
Sbjct: 81 DQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVG 140
Query: 87 --------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
K + ++FDEM RDV SWN++L G++ F + V LF M++ G +
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D+ TV + A + +++ +H+ + +G + + VCN+ IS +K L+ A +V
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F +E + VSWNSM+AG + ++ + +M G + T S++ S +
Sbjct: 261 FDNMEN--KDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLK 318
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD---GICDRTRVSWTA 315
L R++H + G + +V+ L+ +KC +ID A LF G+ ++ VSWTA
Sbjct: 319 ELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGV--QSVVSWTA 376
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF--DNYACS 373
MISGY Q GD D+A+ LF M G P+ T ++++ E+ NY S
Sbjct: 377 MISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKS 436
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
V AL+D + K G+I DA ++F + K V++W+ M+AG A GE EA +
Sbjct: 437 SS------VGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKI 490
Query: 434 FHQLMELDLRPNRVTFLAVLQACTH-TGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
FHQL ++PN TF +++ ACT T +E+G Y K + N L S +
Sbjct: 491 FHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFH--AYAIK-LRLNNALCVSSSLVT 547
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
L ++G ++ A + + + D W +++ H
Sbjct: 548 LYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQH 583
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 209/432 (48%), Gaps = 13/432 (3%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD+ +RD+ N +L +++ + L LF ++ G+ D T+ +
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + ++ + VH + G+ +SV N+ + Y K +++ VF + +R VVSWN
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDR--DVVSWN 172
Query: 214 SMVAGCTYGDKFDDSL-NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
S++ G ++ ++F+D + + M G+R D TV +++++ A+ G +H+ +
Sbjct: 173 SLLTGYSW-NRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVK 231
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GF+ + V N+LISM SK G + ARV+FD + ++ VSW +MI+G+ G EA
Sbjct: 232 LGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFET 291
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+ AG P T S+I C L L + GL N V AL+ +K
Sbjct: 292 FNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTK 351
Query: 393 CGSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
C I DA LF + + VVSWT MI+G NG+ +A++LF + ++PN T+
Sbjct: 352 CKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYST 411
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
+L H F IS I + +Y + + D + G + +A+ + +
Sbjct: 412 IL-TVQHAVF------ISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIE 464
Query: 512 IKSDAGIWGTLL 523
K D W +L
Sbjct: 465 TK-DVIAWSAML 475
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 191/532 (35%), Positives = 269/532 (50%), Gaps = 11/532 (2%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
S+N L FA LRLF M ++ D T+ L AA A +S H+
Sbjct: 84 SYNVTLRFFASTR-PRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSAHALL 142
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+G+ A ++ ++ Y+ D A VF GI R VVSWN+M+ D
Sbjct: 143 CRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRR--DVVSWNAMMKAYERAGMAAD 200
Query: 228 SLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+R M+ G + TV +L++ LV GR + ++ V + L+
Sbjct: 201 VARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALV 260
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY KCG++ AR +FDGI + V+W AMI+GYAQ G EA+ LF +M G PD +
Sbjct: 261 GMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKI 320
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++ ++S C GALELG D YA GL NV V AL+DMYSKCG + A ++F L
Sbjct: 321 TLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKL 380
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQACTHTGFLEKG 465
P K +W +I G A NG EA+ F + E LRP+ +TF+ VL AC H G L+ G
Sbjct: 381 PCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDG 440
Query: 466 --WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
W S+ P+++HYSCM DLL R G L+EA DFV+ +P K+DA + G LL
Sbjct: 441 RRWFNSLTSE----FQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALL 496
Query: 524 CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
AC+ N+E+ E V + +LEP ++ YV + YA R D A +R +M+ V K
Sbjct: 497 AACRKCKNVEVSERVINRIMQLEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVSK 556
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
PG S ++GK F A D ++ Y + D L R E Y +L +
Sbjct: 557 IPGCSWVEVSGKVLEFYAGDESQHGADDMYQLHDMLIDEMRLEGYVPNLDLV 608
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 195/422 (46%), Gaps = 20/422 (4%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG-----------HIVKSPFV 86
L LF +M + + P+ T PF+ A A+ + +++ H H V S
Sbjct: 100 ALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSAHALLCRLGLQAHDHTVHSLVT 159
Query: 87 KCDRLD---CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFV 142
L A ++FD + RDV SWNAM+ + + G +V R+F +M G + + V
Sbjct: 160 MYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPNEV 219
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
TV + A A L L + + + ++ V + + Y KC ++ A VF GI
Sbjct: 220 TVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGI 279
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+ VV+WN+M+ G +++ + M G D T+V +LS+ AL
Sbjct: 280 AH--KDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALEL 337
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G + ++ H G +V V L+ MYSKCGD+D A +F + + +W A+I G A
Sbjct: 338 GTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAF 397
Query: 323 KGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 380
G EA+R F M G PD +T + ++S C +G L+ G +WF++ + +
Sbjct: 398 NGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKI 457
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ ++D+ ++ G + +A + +P K V ++A C + + +++M+
Sbjct: 458 EHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCKNVEVSERVINRIMQ 517
Query: 440 LD 441
L+
Sbjct: 518 LE 519
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+ WN+ ++ A +FR M + + PN +T + AC DL+ + +
Sbjct: 182 VVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLE 241
Query: 78 ----------GHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G +V S V KC + A ++FD +A +DV +WNAM+ G+AQ G +
Sbjct: 242 EWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSK 301
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF++MR G D +T++G+ A L L + ++ H G+ +V V +
Sbjct: 302 EAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALV 361
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRL 242
Y+KC DL A VF + + +WN+++ G + + +++ + M G R
Sbjct: 362 DMYSKCGDLDKAVQVFGKLP--CKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRP 419
Query: 243 DVTTVVSLLSSFVCPEALVQGR 264
D T + +LS+ V L GR
Sbjct: 420 DDITFIGVLSACVHAGLLKDGR 441
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 291/548 (53%), Gaps = 20/548 (3%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + C L + +F+ + + V WN+++ G+ + L LF M G+ D
Sbjct: 71 SAYATCGELATSRFVFESVEAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDY 130
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + + + L K +H GI IG +DV V N+ +S Y +C + A VF
Sbjct: 131 TLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVF--D 188
Query: 203 EERLRTVVSWNSMVAGCTYGDK-----FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
E R V S+N +++GC + DD NF+ M GF+ D TV SLL VC
Sbjct: 189 ETPHRNVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLP--VCC 246
Query: 258 EALVQ---GRLVHSHGIHYGFDL----DVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
+ GR +H + + G DL DV + ++LI MYS+ + R +FD + +R
Sbjct: 247 GDTGKWDYGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNV 306
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKWFDN 369
WTAMI+GY Q G D+AL L AM+ G P+ V+++S + CG L GK
Sbjct: 307 YVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHG 366
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFV 428
++ L D+V +CNALIDMYSKCGS+ AR F K ++W++MI+ L+G
Sbjct: 367 FSIKMELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGE 426
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS 488
EA+ ++++++ +P+ +T + VL AC+ +G +++G ISI + P ++ +
Sbjct: 427 EAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEG--ISIYKSLMTKYEIKPTVEICA 484
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPH 548
C+ D+LGR G+L +AL+F++ MP+ +WG+LL A IH N + L +LEP
Sbjct: 485 CVVDMLGRSGQLDQALEFIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPE 544
Query: 549 SAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
+ + Y+ ++N YA RWD V +RT+MK +KK PG S I+GKT +F+ D+ H
Sbjct: 545 NPSNYISLSNTYASDRRWDVVTEVRTIMKERGLKKVPGCSWITISGKTHSFSVADKAHPS 604
Query: 609 SELTYPVL 616
S L Y +L
Sbjct: 605 SSLIYEML 612
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 217/454 (47%), Gaps = 30/454 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ ++ WNS I V ++ + L LFR+M +N + P++ T + K +L DL+ ++
Sbjct: 91 AKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGKL 150
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM-- 119
IHG ++ FV +C A K+FDE R+V S+N ++ G A +
Sbjct: 151 IHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALEN 210
Query: 120 -GFL--ENVLRLFYNMRLVGIQADFVTVMGLTQAAI-HAKHLSLLKSVHSF----GIHIG 171
F +++ F M+ G +AD TV L + +H + G+ +
Sbjct: 211 CNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLK 270
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+D+DV + ++ I Y++ + + VF ++ R V W +M+ G DD+L
Sbjct: 271 MDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKN--RNVYVWTAMINGYVQNGAPDDALVL 328
Query: 232 YRHM-MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
R M M +G R + +++S L + L+ G+ +H I + DVS+ N LI MYS
Sbjct: 329 LRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYS 388
Query: 291 KCGDIDSARVLFDGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
KCG +D AR F+ + ++W++MIS Y G +EA+ ++ M G PD++TV+
Sbjct: 389 KCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITVV 448
Query: 350 SMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
++S C +SG ++ G + + +K V +C ++DM + G + A E +P
Sbjct: 449 GVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFIKEMPL 508
Query: 409 KIVVS-WTTMIAGCALNGEFVEALDLFHQLMELD 441
S W +++ ++G + L+EL+
Sbjct: 509 DPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELE 542
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 210/470 (44%), Gaps = 24/470 (5%)
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
+Y V + +++ L Q I + L + H+ + G + + +S+YA
Sbjct: 16 YYTSATVSLAHTPQSLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYAT 75
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C +L + VF +E ++V WNS++ G F +L +R M NG D T+
Sbjct: 76 CGELATSRFVFESVEA--KSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLA 133
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
++ F E LV G+L+H GI GF DV V N+L+SMY +CG+ A +FD R
Sbjct: 134 TVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHR 193
Query: 309 TRVSWTAMISGYAQKGDL-----DEALRLFFAMEAAGELPDLVTVLSMIS-GCGQSGALE 362
S+ +ISG A + D+ F M+ G D TV S++ CG +G +
Sbjct: 194 NVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWD 253
Query: 363 LGKWFDNYACSGGL----KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
G+ Y GL +V + ++LIDMYS+ + R +F + + V WT MI
Sbjct: 254 YGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMI 313
Query: 419 AGCALNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
G NG +AL L + M+ +RPN+V+ ++ L AC L G I
Sbjct: 314 NGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIK--- 370
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
+ N ++ + + D+ + G L A ++ DA W +++ A +H GE
Sbjct: 371 MELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGR---GEE 427
Query: 538 VAYCLFKLEPHSAAP----YVEMANKYALGGRWD-GVANIRTMMKRNQVK 582
+K+ P V + + + G D G++ +++M + ++K
Sbjct: 428 AIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIK 477
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 190/613 (30%), Positives = 309/613 (50%), Gaps = 20/613 (3%)
Query: 32 KNEAHKTL-LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----- 85
+N+ H + LFR M DIE N+ T F KAC L D I V+ F
Sbjct: 122 RNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLY 181
Query: 86 ---------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
VK L A K+FD M +DV WN+++ G+ Q G +++F M G
Sbjct: 182 VGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGG 241
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ VT+ L +A + + HS+ + +G+ DV V + + Y+ D A
Sbjct: 242 LRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAA 301
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
LVF + R +++SWN+M++G +S +R ++ +G D T+VSL+
Sbjct: 302 LVFDSMCSR--SLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQ 359
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
L GR++HS I + + + ++ MYSKCG I A ++F + + ++WTAM
Sbjct: 360 TSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAM 419
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
+ G +Q G ++AL+LF M+ + VT++S++ C G+L G+ + G
Sbjct: 420 LVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGY 479
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELF-YALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+ ++ +ALIDMY+KCG I A +LF K V+ +MI G ++G AL ++
Sbjct: 480 AFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYS 539
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+++E L+PN+ TF+++L AC+H+G +E+G A+ D + P+ HY+C+ DL
Sbjct: 540 RMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDV--RPQHKHYACLVDLHS 597
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G+L+EA + V+ MP + + LL C+ H N +G +A L L+ ++ YV
Sbjct: 598 RAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVM 657
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
++N YA +W+ V IR +M+ +KK PG SL + K TF A D H Y +
Sbjct: 658 LSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQL 717
Query: 616 LDCLALHSREEAY 628
L+ L L E Y
Sbjct: 718 LENLRLEVEAEGY 730
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 230/470 (48%), Gaps = 31/470 (6%)
Query: 58 PFIAKACAKLSDL--------IYSQMIHGHIVKS--------------PFVKCDRLDCAY 95
PF +A + S L I+ + IH I+K+ + L A
Sbjct: 40 PFFNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHAR 99
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
+FD+ ++ + A NAM+ GF + V RLF M I+ + T M +A
Sbjct: 100 NVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLL 159
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ + + G + V ++ ++ K L A+ VF G+ E+ VV WNS+
Sbjct: 160 DDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEK--DVVCWNSI 217
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ--GRLVHSHGIHY 273
+ G F +S+ + M+ G R T+ +LL + C ++ ++ G HS+ +
Sbjct: 218 IGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKA--CGQSGLKKVGMCAHSYVLAL 275
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G DV V+ +L+ MYS GD SA ++FD +C R+ +SW AMISGY Q G + E+ LF
Sbjct: 276 GMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALF 335
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ +G D T++S+I GC Q+ LE G+ + L+ ++++ A++DMYSKC
Sbjct: 336 RRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKC 395
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G+I A +F + +K V++WT M+ G + NG +AL LF Q+ E + N VT ++++
Sbjct: 396 GAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLV 455
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
C H G L KG + + G +++ + S + D+ + GK+ A
Sbjct: 456 HCCAHLGSLTKGRTVH-AHFIRHGYAFDAVIT--SALIDMYAKCGKIHSA 502
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 139/298 (46%), Gaps = 16/298 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S ++ WN+ I V ++ LFR++ Q+ ++ T + + C++ SDL ++
Sbjct: 309 SRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRI 368
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H I++ + KC + A +F M ++V +W AMLVG +Q G+
Sbjct: 369 LHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGY 428
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E+ L+LF M+ + A+ VT++ L H L+ ++VH+ I G D + +
Sbjct: 429 AEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSA 488
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I YAKC + AE +F E L+ V+ NSM+ G +L Y M+ +
Sbjct: 489 LIDMYAKCGKIHSAEKLFNN-EFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLK 547
Query: 242 LDVTTVVSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ TT VSLL++ + +G+ L HS + L+ ++S+ G ++ A
Sbjct: 548 PNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEA 605
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 193/638 (30%), Positives = 323/638 (50%), Gaps = 31/638 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R T+ WN+ I V + + F M + I+P+ ++F + A + L D +
Sbjct: 147 RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNAN 206
Query: 75 MIHGHIVK--SPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++HG +VK S +V + L+ A K+FD R+ WN M+ F Q
Sbjct: 207 VVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQ 266
Query: 119 MGF-LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
F LE + F + D VT++ AA H + L + +H+F I V
Sbjct: 267 NNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVC 326
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V N I+ Y++C+ + + +F + E+ VVSWN+M++ D++L + M
Sbjct: 327 VMNALIAMYSRCNSIDTSFKIFDNMPEK--DVVSWNTMISAFVQNGLNDEALMLFYEMKK 384
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+D TV +LLS+ G+ H + + G + + + LI MY+K G I++
Sbjct: 385 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEA 443
Query: 298 ARVLFDGIC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
A+ +F+ +R + +W +M+SGY Q G +D+A + M +P++VT+ S++ C
Sbjct: 444 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPAC 503
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
SG ++ GK ++ L NV V ALIDMYSK GSI A +F EK +V+++
Sbjct: 504 NPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYS 563
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
TMI G +G AL +FH++ + ++P+ VT +AVL AC++ G +++G I ++
Sbjct: 564 TMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI----FES 619
Query: 476 KGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCACKIHLNI 532
YN P +H+ C+AD+LGR G++ +A +FV + K + IWG+LL AC+IH
Sbjct: 620 MRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQF 679
Query: 533 EIGEYVAYCLFKLEPHSAAP--YVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
E+G+ VA L ++E + +V ++N YA W+ V +R M+ +KK G S
Sbjct: 680 ELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWI 739
Query: 591 HINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
I G F ++DR H +S+ Y +L+ L + + Y
Sbjct: 740 EIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGY 777
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 241/527 (45%), Gaps = 49/527 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQN--DIEPNNLTFPFIAKACAKLSDLIY 72
R ST+ WN+ I V N + LL + MK + ++ ++ T+ + KACA +L+
Sbjct: 32 RPSTV-LWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVV 90
Query: 73 SQMIHGHIVK---SP-----------FVKCD-------------RLDCAYKIFDEMAVRD 105
+ +H H ++ +P + C R D K+FD M R
Sbjct: 91 GKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRT 150
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V +WN ++ + + ++ F M +GI+ V+ + + A VH
Sbjct: 151 VVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHG 210
Query: 166 FGIHIGVD--ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
+ +G + D+ V ++ I YA+ L+ A+ VF ER V WN+M++ +
Sbjct: 211 MLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV--WNTMISAFVQNN 268
Query: 224 KFDDSLN-FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ + F++ + +D T++S +S+ + +H+ I V V+
Sbjct: 269 FSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVM 328
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N LI+MYS+C ID++ +FD + ++ VSW MIS + Q G DEAL LF+ M+ +
Sbjct: 329 NALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLM 388
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
D VTV +++S ++GK Y G++ M + LIDMY+K G I A+ +
Sbjct: 389 VDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM-DSYLIDMYAKSGLIEAAQNV 447
Query: 403 FYA--LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
F E+ +W +M++G NG +A + Q+++ + PN VT ++L AC +G
Sbjct: 448 FEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSG 507
Query: 461 FLEKGWAISIIQYDDKGISYNPELDH----YSCMADLLGRKGKLKEA 503
+++ G + G S +LD + + D+ + G + A
Sbjct: 508 YIDWGKQL-------HGFSIRNDLDQNVFVATALIDMYSKSGSIAHA 547
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 212/462 (45%), Gaps = 43/462 (9%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG--IQADFVTVMGL 147
+L A ++FD + WN +++G F + L + NM+ ++ D T +
Sbjct: 19 QLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSV 78
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE--- 204
+A ++L + K+VH+ + ++ V N+ ++ Y+ C + G
Sbjct: 79 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 138
Query: 205 --------RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
R RTVV+WN+++A +++ +++ + MM G + + V++ +F
Sbjct: 139 VRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSS 198
Query: 257 PEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
+VH + G + D+ V+++ I MY++ G ++ A+ +FD +R W
Sbjct: 199 LGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWN 258
Query: 315 AMISGYAQKGDLDEALRLFF-AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
MIS + Q E ++LFF A+E+ D VT+LS IS EL + +
Sbjct: 259 TMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIK 318
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
V V NALI MYS+C SI + ++F +PEK VVSW TMI+ NG EAL L
Sbjct: 319 NVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALML 378
Query: 434 FHQLMELDLRPNRVTFLAVLQAC-----------THTGFLEKGWAISIIQYDDKGISYNP 482
F+++ + DL + VT A+L A TH L G IQ++
Sbjct: 379 FYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-----IQFEG------- 426
Query: 483 ELDHYSCMADLLGRKGKLKEALD-FVQSMPIKSDAGIWGTLL 523
+D Y + D+ + G ++ A + F +S + D W +++
Sbjct: 427 -MDSY--LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 465
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP--DLVTVLS 350
G + AR LFD + + V W +I G DEAL + M+++ D T S
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD------------ 398
++ C + L +GK + + + +V N+L++MYS C S
Sbjct: 78 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137
Query: 399 -ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
R++F + ++ VV+W T+IA + EA+ F +M++ ++P+ V+F+ V A +
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197
Query: 458 HTG 460
G
Sbjct: 198 SLG 200
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 199/660 (30%), Positives = 310/660 (46%), Gaps = 97/660 (14%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMA 102
F + C K + ++++H I+K+ F KC L+ A K+FD M
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
R+ SWNA+L + G L+ L LF M + V G Q + L +
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 163 VHS---------FG-----------IHIGVDA-----------DVSVCNTWISSYAKCDD 191
+HS FG + IGV DV + + + Y+KC
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRV 201
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+ A+ F ++ +R +VSWNS++ +L + MM G D T+ S+
Sbjct: 202 VASAQRAFDDMD--VRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVA 259
Query: 252 SSFVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFD------- 303
S+ A+ +G +H+ + H + D+ + N L+ MY+KC ++ AR++FD
Sbjct: 260 SACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDV 319
Query: 304 ------------------------GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+ +R VSW A+I+GY Q G+ +EA+RLF ++
Sbjct: 320 VSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379
Query: 340 GELPDLVTVLSMISGCGQSGALELGK-----------WFDNYACSGGLKDNVMVCNALID 388
P T ++++ C L+LG+ WF + G ++ V N+LID
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKS-----GEDSDIFVGNSLID 434
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY KCG + D R +F + E+ VSW MI G A NG EAL++F +++ RP+ VT
Sbjct: 435 MYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVT 494
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
+ VL AC+H G +E+G + G+ P DHY+CM DLLGR G L EA + +Q
Sbjct: 495 MIGVLSACSHAGLVEEGRCYFQSMTIEHGLV--PVKDHYTCMVDLLGRAGCLDEANNLIQ 552
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
+MP++ DA +WG+LL ACK+H NI +G+YVA L +++P ++ PYV ++N YA GRW
Sbjct: 553 TMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKD 612
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
V +R M++ V K PG S I F +D+ H + Y +L L + Y
Sbjct: 613 VVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGY 672
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 220/477 (46%), Gaps = 62/477 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + ++ + L M D N +F ACA L DL IHG I
Sbjct: 119 WNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIA 178
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC + A + FD+M VR++ SWN+++ + Q G L
Sbjct: 179 KSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALE 238
Query: 128 LFYNMRLVGIQADFVTVMGLTQA-----------AIHAKHLSLLKSVHSFGI-HIGVDA- 174
+F M GI+ D +T+ + A IHA+ + K + + + VD
Sbjct: 239 VFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMY 298
Query: 175 -------------------DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
DV + +S YAK +K A L+F + E R VVSWN++
Sbjct: 299 AKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMME--RNVVSWNAL 356
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+AG T + ++++ + + T +LL++ L GR H+H + +GF
Sbjct: 357 IAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGF 416
Query: 276 ------DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
D D+ V N+LI MY KCG ++ R++F+ + +R VSW AMI GYAQ G EA
Sbjct: 417 WFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEA 476
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGL---KDNVMVCNA 385
L +F M +GE PD VT++ ++S C +G +E G+ +F + GL KD+
Sbjct: 477 LEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY---TC 533
Query: 386 LIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
++D+ + G + +A L +P E V W +++A C ++G + +L+E+D
Sbjct: 534 MVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEID 590
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 37/305 (12%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
LD + LL + V +++ + RLVH+ I F ++ + N L+ +Y KCG ++ AR +
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 302 FD--------------------GICD-----------RTRVSWTAMISGYAQKGDLDEAL 330
FD G D R + SW AM+SG+AQ+ +EAL
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
R M + + + + S +S C L +G +V + +AL+DMY
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMY 196
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
SKC + A+ F + + +VSW ++I NG +AL++F ++M + P+ +T
Sbjct: 197 SKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLA 256
Query: 451 AVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
+V AC + +G I ++++D Y +L + + D+ + ++ EA
Sbjct: 257 SVASACASLSAIREGLQIHARVMKHD----KYRNDLVLGNALVDMYAKCRRVNEARLVFD 312
Query: 509 SMPIK 513
MP++
Sbjct: 313 RMPLR 317
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 158/404 (39%), Gaps = 93/404 (23%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WNS I A K L +F +M IEP+ +T +A ACA LS + IH
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH 275
Query: 78 GHIVKSP---------------FVKCDRLDCAYKIFDEMAVRD----------------- 105
++K + KC R++ A +FD M +RD
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSV 335
Query: 106 --------------VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
V SWNA++ G+ Q G E +RLF ++ I T L A
Sbjct: 336 KAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNAC 395
Query: 152 IHAKHLSLLKSVHS------FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ L L + H+ F G D+D+ V N+ I Y KC ++ LVF ER
Sbjct: 396 ANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVF----ER 451
Query: 206 L--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+ R VSWN+M+ G ++L +R M+ +G R D T++ +LS+ + +G
Sbjct: 452 MLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEG 511
Query: 264 R-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
R S I +G V V + +T M+ +
Sbjct: 512 RCYFQSMTIEHGL---VPV----------------------------KDHYTCMVDLLGR 540
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
G LDEA L M PD V S+++ C G + LGK+
Sbjct: 541 AGCLDEANNLIQTMPME---PDAVVWGSLLAACKVHGNITLGKY 581
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 287/550 (52%), Gaps = 40/550 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A KIF+ + + +N M+ +A+ G L VL LF +R G+ D T + +A
Sbjct: 196 AEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGC 255
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + + V F + G+D D V N+ I Y + +++ A+ +F E R VSWN
Sbjct: 256 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLF--DEMTTRDSVSWN 313
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
M++G +F+D++N +R M G + D TVVS LS+ + L G +H++ +
Sbjct: 314 VMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VR 372
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL------ 326
+ N L+ MY+KCG ++ AR +FD + + + WT+MISGY GDL
Sbjct: 373 KELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDL 432
Query: 327 -------------------------DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
D+A+ LF M+ PD TV+++++GC Q GAL
Sbjct: 433 FDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGAL 492
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E GKW Y + +V+V ALI+MYSKCG + + E+FY L +K SWT++I G
Sbjct: 493 EQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGL 552
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A+NG+ EAL LF ++ + +P+ +TF+ VL AC+H G +E+G K
Sbjct: 553 AMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGR--RFFNSMKKVHRIE 610
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKS---DAGIWGTLLCACKIHLNIEIGEYV 538
P+++HY C+ DLLGR G L EA + +Q +PI++ ++G LL AC+IH N+++GE +
Sbjct: 611 PKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERL 670
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +E ++ + +AN YA RW+ +R MK VKK PG SL ++G
Sbjct: 671 AKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHE 730
Query: 599 FTAEDRYHAE 608
F D H E
Sbjct: 731 FLVGDPSHPE 740
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 212/452 (46%), Gaps = 50/452 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N ++ + K LLLF+Q++++ + P+ T+PF+ KA L D+ + + G IV
Sbjct: 211 YNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 270
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + + ++ A K+FDEM RD SWN M+ G+ + E+ +
Sbjct: 271 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 330
Query: 128 LFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M+ G + D TV+ A K+L L +H++ + + + N + Y
Sbjct: 331 TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTTRIDNALLDMY 389
Query: 187 AKCDDLKMAELVF--------------------CG--IEER-------LRTVVSWNSMVA 217
AKC L +A +F CG E R +R VV W +M+
Sbjct: 390 AKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMIN 449
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G FDD++ +R M + D TVV+LL+ AL QG+ +H + +
Sbjct: 450 GYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITM 509
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV V LI MYSKCG +D + +F + D+ SWT++I G A G EALRLF ME
Sbjct: 510 DVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEME 569
Query: 338 AAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G PD +T + ++S C G +E G ++F++ ++ V +ID+ + G +
Sbjct: 570 RVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLL 629
Query: 397 GDARELFYALP----EKIVVSWTTMIAGCALN 424
+A EL +P E +V + +++ C ++
Sbjct: 630 DEAEELIQEIPIENCEIVVPLYGALLSACRIH 661
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 185/408 (45%), Gaps = 43/408 (10%)
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD--DLKMAELVFCGIEERLRTVV 210
+ K + LK + S IG++ D N ++ A +L+ AE +F +++ ++
Sbjct: 152 NCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP--SLF 209
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+N MV L ++ + +G D T +L + C + QG V
Sbjct: 210 VYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFI 269
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ G DLD V N+LI MY + ++++A+ LFD + R VSW MISGY + ++A+
Sbjct: 270 VKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAI 329
Query: 331 RLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
F M+ G E PD TV+S +S C LELG NY L + NAL+DM
Sbjct: 330 NTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDM 388
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH-------------- 435
Y+KCG + AR +F + K V+ WT+MI+G G+ EA DLF
Sbjct: 389 YAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMI 448
Query: 436 ----QLMELD-------------LRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKG 477
Q D ++P++ T + +L C G LE+G W + D+
Sbjct: 449 NGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL--DENR 506
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
I+ + + + + ++ + G + ++L+ + K D W +++C
Sbjct: 507 ITMDVVVG--TALIEMYSKCGCVDKSLEIFYELEDK-DTASWTSIICG 551
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 13/291 (4%)
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALV------QGRLVHSHGIHYGFDLDVSVINTLI 286
RH + + V +S L+ C E L Q + + S G + D IN L+
Sbjct: 123 RHFSSSPHLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLM 182
Query: 287 SMY--SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+ S G++ A +F+ + D + + M+ YA++G L + L LF + G PD
Sbjct: 183 AFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPD 242
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T ++ G + G+ + G+ + V N+LIDMY + ++ +A++LF
Sbjct: 243 GFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFD 302
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLE 463
+ + VSW MI+G F +A++ F ++ E + +P+ T ++ L ACT LE
Sbjct: 303 EMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLE 362
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
G I Y K + + +D+ + D+ + G L A + M +K+
Sbjct: 363 LGDEIH--NYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMKN 409
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 139/366 (37%), Gaps = 52/366 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN I V + FR+M+Q E P+ T AC L +L IH ++
Sbjct: 312 WNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 371
Query: 81 VKS-------------PFVKCDRLDCAYKIFDEMA------------------------- 102
K + KC L+ A IFDEM+
Sbjct: 372 RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARD 431
Query: 103 ------VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
VRDV W AM+ G+ Q ++ + LF M++ ++ D TV+ L
Sbjct: 432 LFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGA 491
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +H + + DV V I Y+KC + + +F +E+ + SW S++
Sbjct: 492 LEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELED--KDTASWTSII 549
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGF 275
G K ++L + M G + D T + +LS+ + +G R +S +
Sbjct: 550 CGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRI 609
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGI----CDRTRVSWTAMISGYAQKGDLDEALR 331
+ V +I + + G +D A L I C+ + A++S ++D R
Sbjct: 610 EPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGER 669
Query: 332 LFFAME 337
L +E
Sbjct: 670 LAKKLE 675
>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 286/508 (56%), Gaps = 12/508 (2%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C +L ++K+F +M +R+ SWN ++ G G + + L + M+ ++ D VT++ +
Sbjct: 665 CGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISI 724
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
++L ++H + I G DVS+ N IS Y C D+ + +F + R
Sbjct: 725 IPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMP--WR 782
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
++VSWN+++ G + ++ + + M+ G + + T+++LL S C L+QG+ +H
Sbjct: 783 SIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPS--C-XTLLQGKSIH 839
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ + G ++ +I +LISMY++ +I+S LF+ W A++S Y Q +
Sbjct: 840 AFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAK 899
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
E++ F + A PD +T LS+IS C Q +L L Y G ++++ NALI
Sbjct: 900 ESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALI 959
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
D++++CG+I A+++F L K VSW+TMI G L+G+ AL L Q+ ++P+ +
Sbjct: 960 DLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGI 1019
Query: 448 TFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
T+ +VL AC+H GF+++GW I S+++ +G+ ++HY+CM DLLGR G+L EA D
Sbjct: 1020 TYASVLSACSHGGFIDQGWMIFNSMVE---EGVPR--RMEHYACMVDLLGRTGQLNEAYD 1074
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
FV+ +P K + +LL AC IH N+++GE + LF+L+P ++ YV + N YA GR
Sbjct: 1075 FVEKLPCKPSVSLLESLLXACIIHGNVKLGEKICSLLFELDPKNSGSYVMLYNIYAAAGR 1134
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHIN 593
W +R+ M+ Q++K PG SL N
Sbjct: 1135 WMDANRVRSDMEERQLRKIPGFSLVEGN 1162
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 241/512 (47%), Gaps = 34/512 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ + +F+QM + +++PN +TF I C ++ + +H H++
Sbjct: 515 WNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVM 574
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQAD 140
K Y++ +++V A+L +A++G + +FY M R +
Sbjct: 575 K------------YRLDSQLSVA-----TALLSMYAKLGDXNSAXFIFYQMPRKTSYRDS 617
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG--VDADVSVCNTWISSYAKCDDLKMAELV 198
++ G+ + ++ + I G D+ +++ N ++ Y+ C L + +
Sbjct: 618 MISGYGIMSM---GRPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKL 674
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F + LR +SWN++++GC + ++ M LD+ T++S++ E
Sbjct: 675 FQKMP--LRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXE 732
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L+QG +H + I GF DVS++N LISMY CGDI++ + LF+ + R+ VSW A+I+
Sbjct: 733 NLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALIT 792
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY +E + F M G+ P+ VT+L+++ C L GK +A G+
Sbjct: 793 GYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSC---XTLLQGKSIHAFAVRTGVIV 849
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ +LI MY++ +I LF ++ + W +++ E++ F +L+
Sbjct: 850 ETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELL 909
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY-DDKGISYNPELDHYSCMADLLGRK 497
+ P+ +TFL+++ AC L + S++ Y KG ++ + + + DL R
Sbjct: 910 HARVEPDYITFLSLISACVQLSSL--NLSNSVMAYVIQKG--FDKHIVISNALIDLFARC 965
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G + A + + K DA W T++ +H
Sbjct: 966 GNISIAKKIFEGLSSK-DAVSWSTMINGYGLH 996
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 199/418 (47%), Gaps = 47/418 (11%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIF 98
++ TFPF+ KAC+ L + ++ +H ++++ F K R+ A +
Sbjct: 344 DDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVL 403
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D+++ D+ +WNA++ G++ GF + V + + +G++ + T + K L
Sbjct: 404 DKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLD 463
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
+ KS+H F + G +D + IS YA +L +A +F E + VV WNSM++
Sbjct: 464 IGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAE--KNVVIWNSMISA 521
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
K ++ ++ M+ + +V T VS++ G+ +H+H + Y D
Sbjct: 522 YAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQ 581
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+SV L+SMY+K GD +SA +F + +T +MISGY + R FF +
Sbjct: 582 LSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYR-DSMISGYG----IMSMGRPFFWVRL 636
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
L A++ GK FD+ + + NAL+ YS CG +
Sbjct: 637 LMHL-----------------AIKTGKEFDSX---------LNISNALLAFYSDCGKLSS 670
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+ +LF +P + +SW T+I+GC NG+ +A+ L H++ + + + VT ++++ C
Sbjct: 671 SFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPIC 728
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 202/493 (40%), Gaps = 50/493 (10%)
Query: 46 KQNDIEPNNLTFPFIAKACAKLSDL--------IYSQMIHGHIVKSPFVKCDRL---DCA 94
K N P +F + C + +L + M ++V + C L + A
Sbjct: 239 KHNSSNPKVTSFLRLFDLCRNIENLKPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELA 298
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
F+ + V N M+ G E+VL ++ R++G +D T + +A
Sbjct: 299 LSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSAL 358
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
+ + + VH + + ++ + + YAK + A LV I + +V+WN+
Sbjct: 359 GAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQP--DLVTWNA 416
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+++G + + R ++ G + +V+T S++ + L G+ +H + G
Sbjct: 417 LISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSG 476
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
F D + LISMY+ G++ AR LFD ++ V W +MIS YAQ EA ++F
Sbjct: 477 FSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQ 536
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M A P++VT +S+I C S GK + L + V AL+ MY+K G
Sbjct: 537 QMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLG 596
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
A +FY +P K +MI+G + +M + RP F
Sbjct: 597 DXNSAXFIFYQMPRKTSYR-DSMISG--------------YGIMSMG-RP----FF---- 632
Query: 455 ACTHTGFLEKGWAISIIQYDDK-GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
W ++ K G ++ L+ + + GKL + Q MP++
Sbjct: 633 -----------WVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLR 681
Query: 514 SDAGIWGTLLCAC 526
+A W TL+ C
Sbjct: 682 -NAISWNTLISGC 693
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 130/295 (44%), Gaps = 19/295 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+I WN+ I ++ + F QM +PN +T + +C L + + IH
Sbjct: 783 SIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCXTL---LQGKSIH 839
Query: 78 ------GHIVKSPFV--------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G IV++P + + + ++ +F+ D+A WNA++ + Q +
Sbjct: 840 AFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAK 899
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ F + ++ D++T + L A + L+L SV ++ I G D + + N I
Sbjct: 900 ESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALI 959
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+A+C ++ +A+ +F G+ + VSW++M+ G + +L M +G + D
Sbjct: 960 DLFARCGNISIAKKIFEGLSS--KDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPD 1017
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T S+LS+ + QG ++ + + G + ++ + + G ++ A
Sbjct: 1018 GITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEA 1072
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 285/570 (50%), Gaps = 24/570 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I L LF QM + P T + +C +L + + IHG +
Sbjct: 511 WNALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGI 570
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC L+ A +F+EM + V SWN M+ + Q GF + +
Sbjct: 571 KSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMF 630
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M G++ VT+M L A + + S+H + I +G+ D SV + I YA
Sbjct: 631 VFKRMIGAGVEVSQVTIMSLPSANANPE------SIHCYTIKVGLADDASVVTSLICMYA 684
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ AEL++ + ++ +VS +++ + + M + D +
Sbjct: 685 RYGSTDHAELLYWSLPQK--NLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAM 742
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+S+L P + G + H + I G D V N LISMYSK ++++ LF G+ +
Sbjct: 743 LSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHE 802
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ +SW ++ISG Q G A+ LF M+ G PD +T+ S++SGC Q G L+ G+
Sbjct: 803 KPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERL 862
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+Y L+ V ALI MY+KCGSI A +F ++ + + +W MI+G + G
Sbjct: 863 HSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFE 922
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+AL + ++ E + P+++TFL VL ACTH G + +G Q K P L H
Sbjct: 923 HKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEG--RRYFQIMTKVYDMVPTLQHC 980
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM LL R G +EAL F+++M + D+ +WG L AC IH +++GEY+A L+ L+
Sbjct: 981 ACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDC 1040
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMK 577
+ YV M+N YA+ GRWD VA +R MMK
Sbjct: 1041 RNGGLYVLMSNLYAVTGRWDDVARVREMMK 1070
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 204/382 (53%), Gaps = 10/382 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
++K R+ A+ FD M +RDV SWNA++ G+++ G+ + L LF M +G T+
Sbjct: 487 YMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLKLGFCPRQTTL 546
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+GL + + + KS+H FGI G+ D V N S YAKC DL+ AE +F EE
Sbjct: 547 VGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLF---EE 603
Query: 205 RL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+ ++VVSWN+M+ FD+++ ++ M+ G + T++SL S+ PE+
Sbjct: 604 MMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANANPES---- 659
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+H + I G D SV+ +LI MY++ G D A +L+ + + VS TA+I+ YA+
Sbjct: 660 --IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEA 717
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G+L + F M PD V +LS++ G + +G F YA GL +V
Sbjct: 718 GNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVT 777
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
N LI MYSK ++ LF + EK ++SW ++I+GC G A++LF Q+
Sbjct: 778 NGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCN 837
Query: 444 PNRVTFLAVLQACTHTGFLEKG 465
P+ +T ++L C+ G+L+ G
Sbjct: 838 PDAITIASLLSGCSQLGYLQFG 859
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 148/288 (51%), Gaps = 8/288 (2%)
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
I G+D V V + Y K + A F + +R VVSWN+++ G +
Sbjct: 469 IKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMP--IRDVVSWNALICGYSRNGYDFS 526
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+L + M+ GF TT+V LL S E + QG+ +H GI G LD V N L S
Sbjct: 527 ALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTS 586
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY+KCGD+++A LF+ + D++ VSW MI Y Q G DEA+ +F M AG VT
Sbjct: 587 MYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVT 646
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
++S+ S ++ Y GL D+ V +LI MY++ GS A L+++LP
Sbjct: 647 IMSLPSANANPESIHC------YTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLP 700
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+K +VS T +I A G ++ F Q+ +L+++P+ V L++L
Sbjct: 701 QKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHG 748
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 97/190 (51%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+ +H I G D V V L+ +Y K G + A FD + R VSW A+I GY++ G
Sbjct: 464 IQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGY 523
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
AL LF M G P T++ ++ CGQ + GK + GL + V NA
Sbjct: 524 DFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNA 583
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L MY+KCG + A LF + +K VVSW TMI NG F EA+ +F +++ + +
Sbjct: 584 LTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVS 643
Query: 446 RVTFLAVLQA 455
+VT +++ A
Sbjct: 644 QVTIMSLPSA 653
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
N+ G+ V V AL+D+Y K G + A F +P + VVSW +I G + NG
Sbjct: 466 NHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDF 525
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS 488
AL+LF Q+++L P + T + +L +C + +G +I G+ +P++ +
Sbjct: 526 SALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGI-KSGLHLDPQVKN-- 582
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + + G L+ A + M KS W T++ A
Sbjct: 583 ALTSMYAKCGDLEAAEYLFEEMMDKSVVS-WNTMIGA 618
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 190/588 (32%), Positives = 295/588 (50%), Gaps = 37/588 (6%)
Query: 74 QMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR 133
++ G+ + S + + ++F + RD S+NA+L GF++ G + +
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 134 L--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA----------------- 174
G++ +T+ G+ A +L + VH + +G A
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 175 --------------DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+V +CNT I+ +C + A +F IEER ++W +MV G T
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEER--DSITWTTMVTGLT 253
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
++L+ +R M G +D T S+L++ AL +G+ +H++ ++ +V
Sbjct: 254 QNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVF 313
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V + L+ MYSKC + A +F + + +SWTAMI GY Q G +EA+R+F M+ G
Sbjct: 314 VGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG 373
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
PD T+ S+IS C +LE G F A GL+ V V NAL+ +Y KCGSI DA
Sbjct: 374 IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAH 433
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
LF + VSWT ++ G A G+ E +DLF +++ ++P+ VTF+ VL AC+ +G
Sbjct: 434 RLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSG 493
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
++KG + D I P DHY+CM DL R G LK+A +F++ MP DA W
Sbjct: 494 LVDKGRSYFHSMQQDHDIV--PLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWA 551
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
TLL AC++ ++EIG++ A L KL+P + A YV + + +A G W+ VA +R M+ Q
Sbjct: 552 TLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQ 611
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
VKK PG S K F+A+D+ H S Y L L EE Y
Sbjct: 612 VKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGY 659
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 145/364 (39%), Gaps = 59/364 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + L +FR+M+ + + TF I AC L+ L + IH +I
Sbjct: 245 WTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 304
Query: 82 KS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A +F M +++ SW AM+VG+ Q G E +R
Sbjct: 305 RTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVR 364
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ GI+ D T+ + + + L H + G+ V+V N ++ Y
Sbjct: 365 VFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYG 424
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F E VSW ++V G K ++++ + M+ G + D T
Sbjct: 425 KCGSIEDAHRLF--DEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTF 482
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ +LS+ C S+ G +D R F +
Sbjct: 483 IGVLSA--C---------------------------------SRSGLVDKGRSYFHSMQQ 507
Query: 308 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ +T MI Y++ G L +A M PD +++S C G +E
Sbjct: 508 DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMP---RCPDAFGWATLLSACRLRGDME 564
Query: 363 LGKW 366
+GKW
Sbjct: 565 IGKW 568
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W + I + + +F +M+++ I+P++ T + +CA L+ L H
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHC 402
Query: 79 HIVKS---PFV-----------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+ S P+V KC ++ A+++FDEM+ D SW A+++G+AQ G +
Sbjct: 403 LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKE 462
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT--- 181
+ LF M G++ D VT +G+ A + L+ S+ + D D+ +
Sbjct: 463 TIDLFEKMLSKGVKPDGVTFIGVLSACSRS---GLVDKGRSYFHSMQQDHDIVPLDDHYT 519
Query: 182 -WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
I Y++ LK AE F R W ++++ C
Sbjct: 520 CMIDLYSRSGWLKQAE-EFIKQMPRCPDAFGWATLLSAC 557
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 280/543 (51%), Gaps = 24/543 (4%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+W ++ +A G L + L F +R GI D L +A+ KH +L +S+H+
Sbjct: 43 AWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAV 102
Query: 168 IHIGVDADVSVCNTWISSYAKCD--------------------DLKMAELVFCGIEERLR 207
I +G D+ N ++ Y+K +K+ + +R
Sbjct: 103 IRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVR 162
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VVSWN+++AG ++++LN + M R D T+ S+L F + +G+ +H
Sbjct: 163 DVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIH 222
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ I +GFD DV + ++LI MY+KC ++ + F + +R +SW ++I+G Q G D
Sbjct: 223 GYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFD 282
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
+ L F M P V+ S+I C AL LGK Y G DN + ++L+
Sbjct: 283 QGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLL 342
Query: 388 DMYSKCGSIGDARELFYALP--EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
DMY+KCG+I AR +F + ++ +VSWT +I GCA++G ++A+ LF +++ ++P
Sbjct: 343 DMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPC 402
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
V F+AVL AC+H G +++GW D G++ P L+HY+ +ADLLGR G+L+EA D
Sbjct: 403 YVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVA--PGLEHYAAVADLLGRAGRLEEAYD 460
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+ +M + +W TLL AC+ H NIE+ E V + ++P + +V M+N Y+ R
Sbjct: 461 FISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQR 520
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
W A +R M++ +KK P S + K TF A D+ H + L+ L +
Sbjct: 521 WRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEK 580
Query: 626 EAY 628
E Y
Sbjct: 581 EGY 583
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 186/356 (52%), Gaps = 6/356 (1%)
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
++D K+FD M VRDV SWN ++ G AQ G E L + M ++ D T+ +
Sbjct: 148 KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILP 207
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+++ K +H + I G D DV + ++ I YAKC ++++ F + R
Sbjct: 208 IFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSN--RDA 265
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+SWNS++AGC +FD L F+R M+ + + S++ + AL G+ +H++
Sbjct: 266 ISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAY 325
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI--CDRTRVSWTAMISGYAQKGDLD 327
I GFD + + ++L+ MY+KCG+I AR +F+ I CDR VSWTA+I G A G
Sbjct: 326 IIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHAL 385
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNAL 386
+A+ LF M G P V +++++ C +G ++ G K+F++ G+ + A+
Sbjct: 386 DAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAV 445
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELD 441
D+ + G + +A + + E+ S W+T++A C + A + ++++ +D
Sbjct: 446 ADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVD 501
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 117/246 (47%), Gaps = 14/246 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + L + ++M + ++ P++ T I + +++ + IHG+ +
Sbjct: 167 WNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAI 226
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC +++ + F ++ RD SWN+++ G Q G + L
Sbjct: 227 RHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLG 286
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M ++ V+ + A H L+L K +H++ I +G D + + ++ + YA
Sbjct: 287 FFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYA 346
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++KMA +F IE R +VSW +++ GC D+++ + M+ +G +
Sbjct: 347 KCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAF 406
Query: 248 VSLLSS 253
+++L++
Sbjct: 407 MAVLTA 412
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
++W +I YA G L +L F + + G PD S++ L +
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 371 ACSGGLKDNVMVCNALIDMYSK----------------------CGSIGDARELFYALPE 408
G ++ NAL++MYSK I R+LF +P
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ VVSW T+IAG A NG + EAL++ ++ + +LRP+ T ++L T + KG I
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 182/622 (29%), Positives = 306/622 (49%), Gaps = 19/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS ++ +F M++ E N+ T + + + + IHG +V
Sbjct: 319 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 378
Query: 82 KSPFVK----CDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F C+ L Y +F +M +D+ SWN+++ F G + L
Sbjct: 379 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 438
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L +M G ++VT A + +H + G+ + + N +S Y
Sbjct: 439 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 498
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K ++ + V + R VV+WN+++ G + D +L ++ M G + TV
Sbjct: 499 KIGEMSESRRVLLQMPRR--DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 556
Query: 248 VSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
VS+LS+ + P L++ G+ +H++ + GF+ D V N+LI+MY+KCGD+ S++ LF+G+
Sbjct: 557 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 616
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R ++W AM++ A G +E L+L M + G D + +S + LE G+
Sbjct: 617 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 676
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
A G + + + NA DMYSKCG IG+ ++ + + SW +I+ +G
Sbjct: 677 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 736
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
F E FH+++E+ ++P VTF+++L AC+H G ++KG A + D G+ P ++H
Sbjct: 737 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGL--EPAIEH 794
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
C+ DLLGR G+L EA F+ MP+K + +W +LL +CKIH N++ G A L KLE
Sbjct: 795 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLE 854
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + YV +N +A GRW+ V N+R M +KK S + K +F DR H
Sbjct: 855 PEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTH 914
Query: 607 AESELTYPVLDCLALHSREEAY 628
++ Y L+ + +E Y
Sbjct: 915 PQTMEIYAKLEDIKKLIKESGY 936
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 207/460 (45%), Gaps = 43/460 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM-IHGHI 80
WN+ + V + + FR+M I+P++ + AC + + + +HG +
Sbjct: 141 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 200
Query: 81 VKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
KS + + C+ K+F+EM R+V SW +++VG++ G E V+
Sbjct: 201 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 260
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
++ K SL + + + G+++ ++V N+ IS
Sbjct: 261 DIY-------------------------KDESLGRQIIGQVVKSGLESKLAVENSLISML 295
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++ A +F + E R +SWNS+ A ++S + M ++ TT
Sbjct: 296 GSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 353
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V +LLS + GR +H + GFD V V NTL+ MY+ G A ++F +
Sbjct: 354 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 413
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW ++++ + G +AL L +M ++G+ + VT S ++ C E G+
Sbjct: 414 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 473
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
GL N ++ NAL+ MY K G + ++R + +P + VV+W +I G A + +
Sbjct: 474 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 533
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG-FLEKG 465
+AL F + + N +T ++VL AC G LE+G
Sbjct: 534 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 573
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 208/457 (45%), Gaps = 36/457 (7%)
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
L+ ++H + + + + K R+ A +FD M VR+ SWN M+ G ++G + F
Sbjct: 102 LVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFF 161
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK---SVHSFGIHIGVDADVSVCNTWISSY 186
M +GI+ + L A + S+ + VH F G+ +DV V + Y
Sbjct: 162 RKMCDLGIKPSSFVIASLVTAC--GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY 219
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ + VF + +R VVSW S++ G + + ++ ++ Y+
Sbjct: 220 GVYGLVSCSRKVFEEMPDR--NVVSWTSLMVGYSDKGEPEEVIDIYK------------- 264
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
E+L GR + + G + ++V N+LISM G++D A +FD +
Sbjct: 265 ----------DESL--GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 312
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R +SW ++ + YAQ G ++E+ R+F M + + TV +++S G + G+
Sbjct: 313 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 372
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G V VCN L+ MY+ G +A +F +P K ++SW +++A +G
Sbjct: 373 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 432
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
++AL L ++ N VTF + L AC F EKG + + G+ YN + +
Sbjct: 433 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGN 491
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + G+ G++ E+ + MP + D W L+
Sbjct: 492 --ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 525
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 1/173 (0%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR VH+ + L V NTLI+MY+K G + AR LFD + R VSW M+SG +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVM 381
G E + F M G P + S+++ CG+SG++ G + GL +V
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
V A++ +Y G + +R++F +P++ VVSWT+++ G + GE E +D++
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 263
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 372 CSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
C GL + +V+ N LI+MY+K G + AR LF +P + VSW TM++G G ++E
Sbjct: 98 CVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEG 157
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++ F ++ +L ++P+ +++ AC +G
Sbjct: 158 MEFFRKMCDLGIKPSSFVIASLVTACGRSG 187
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 285/553 (51%), Gaps = 30/553 (5%)
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
R ASW L + + + M + G + D + +A + L + +
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 164 HSFGIHIGV-DADVSVCNTWISSYAKCD---DLKMAELVFCGIEERL------------- 206
H+ + G + V+V NT ++ Y KC D + +L
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174
Query: 207 --RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R +VSWN+M++ + D+F ++L F+R M+ G LD T+ S+L + E L G+
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234
Query: 265 LVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+H++ + ++ S + + L+ MY C ++S R +FD I R W AMISGYA+
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294
Query: 324 GDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQS-GALELGKWFDNYACSGGLKDNVM 381
G ++AL LF M + AG LP+ T+ S++ C S A+ GK YA L ++
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDIT 354
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL- 440
V +AL+DMY+KCG + +R +F +P K V++W +I C ++G+ EAL+LF ++
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEA 414
Query: 441 ----DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ +PN VTF+ V AC+H+G + +G + D G+ P DHY+C+ DLLGR
Sbjct: 415 GRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE--PTSDHYACVVDLLGR 472
Query: 497 KGKLKEALDFVQSMPIKSD-AGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
G+L+EA + V +MP + D G W +LL AC+IH N+E+GE A L LEP+ A+ YV
Sbjct: 473 AGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVL 532
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
++N Y+ G W+ +R M++ VKK PG S + F A D H +SE +
Sbjct: 533 LSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGF 592
Query: 616 LDCLALHSREEAY 628
L+ L+ R+E Y
Sbjct: 593 LETLSEKMRKEGY 605
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 219/502 (43%), Gaps = 62/502 (12%)
Query: 3 VSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
S PP+ RS+ W +R N+ + + + +M + P+N FP + K
Sbjct: 43 TSKTPPKPTSPSRSTA--SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLK 100
Query: 63 ACAKLSDLIYSQMIHGHIVK-----------------------------------SPFVK 87
A + L DL + IH VK + + K
Sbjct: 101 AVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAK 160
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
R+D + +F+ RD+ SWN M+ F+Q L F M L G++ D VT+ +
Sbjct: 161 LGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASV 220
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVS-VCNTWISSYAKCDDLKMAELVFCGIEERL 206
A H + L + K +H++ + + S V + + Y C ++ VF I
Sbjct: 221 LPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILG-- 278
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCP-EALVQGR 264
R + WN+M++G + +L + M+ G + TT+ S++ + V A+ +G+
Sbjct: 279 RRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGK 338
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H++ I D++V + L+ MY+KCG ++ +R +F+ + ++ ++W +I G
Sbjct: 339 EIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHG 398
Query: 325 DLDEALRLFFAMEA----AGEL-PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKD 378
+EAL LF M A GE P+ VT +++ + C SG + G F G++
Sbjct: 399 KGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEP 458
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKI--VVSWTTMIAGCALN-----GEFVEAL 431
++D+ + G + +A EL +P + V +W++++ C ++ GE V A
Sbjct: 459 TSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGE-VAAK 517
Query: 432 DLFHQLMELDLRPNRVTFLAVL 453
+L H L PN + +L
Sbjct: 518 NLLH------LEPNVASHYVLL 533
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 188/628 (29%), Positives = 313/628 (49%), Gaps = 32/628 (5%)
Query: 32 KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI----YSQMIHGHIVKSPFV- 86
+++ + +F++MK + +E N+ + + + S+L Q +H ++ +S V
Sbjct: 430 QHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVD 488
Query: 87 --------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM 132
KC +D A +F M +D SWN+M+ G E + F+ M
Sbjct: 489 ARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTM 548
Query: 133 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDL 192
+ G+ +V+ + L+L + +H G G+D DVSV N ++ YA+ D +
Sbjct: 549 KRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSI 608
Query: 193 KMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+ VF + E + VSWNS + Y +L ++ MM G+R + T +++L
Sbjct: 609 NECQKVFFQMPEYDQ--VSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINIL 666
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT-R 310
++ L G +H+ + Y D ++ N L++ Y KC ++ ++F + +R
Sbjct: 667 AAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDE 726
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW +MISGY G L +A+ L + M G+ D T +++S C LE G
Sbjct: 727 VSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHAC 786
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
A L+ +V+V +AL+DMY+KCG I A F +P + + SW +MI+G A +G +A
Sbjct: 787 AVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKA 846
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPELDHYS 488
L +F ++ + P+ VTF+ VL AC+H G +++G+ + G Y +P ++H+S
Sbjct: 847 LKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYK----HFKSMGEVYGLSPRIEHFS 902
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC--KIHLNIEIGEYVAYCLFKLE 546
CM DLLGR G +K+ DF+++MP+ + IW T+L AC N E+G+ A L +LE
Sbjct: 903 CMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELE 962
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P +A YV ++N +A GG W+ V R M++ VKK G S ++ F A D+ H
Sbjct: 963 PQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTH 1022
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKW 634
E E Y L L R+ Y K+
Sbjct: 1023 PEKEKIYEKLKELMNKIRDAGYVPETKY 1050
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 260/557 (46%), Gaps = 35/557 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE----PNNLTFPFIAKACAKLSD---LIYSQ 74
WNS I + +A LF M+ +E PN T + A L+D ++ Q
Sbjct: 313 WNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQ 372
Query: 75 MIH-------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
M+ G + + F + +DCA IF +M R+ + N ++VG A+
Sbjct: 373 MLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQ 432
Query: 122 LENVLRLFYNMR-LVGIQADFVTVM--GLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVS 177
E ++F M+ LV I ++ + V+ T+ + + + VH++ G VDA +S
Sbjct: 433 GEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARIS 492
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ N ++ Y KC + A VF + + VSWNSM++G + ++F+++++ + M
Sbjct: 493 IGNALVNMYGKCTAIDNACSVFQLMPS--KDTVSWNSMISGLDHNERFEEAVSCFHTMKR 550
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
NG +V+S LSS L GR +H G +G DLDVSV N L+++Y++ I+
Sbjct: 551 NGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINE 610
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQ-KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+ +F + + +VSW + I A+ + + +AL+ F M AG P+ VT +++++
Sbjct: 611 CQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVS 670
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWT 415
L LG + D+ + NAL+ Y KC + D +F + E+ VSW
Sbjct: 671 SFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWN 730
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+MI+G +G +A+DL +M+ + + TF VL AC LE+G +
Sbjct: 731 SMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVR- 789
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
++ S + D+ + GK+ A F + MP+++ W +++ H + G
Sbjct: 790 --ACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYS-WNSMISGYARHGH---G 843
Query: 536 EYVAYCLFKLEPHSAAP 552
+ +++ H +P
Sbjct: 844 QKALKIFTRMKQHGQSP 860
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 211/448 (47%), Gaps = 21/448 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + + + F MK+N + P+N + +C+ L L + IHG
Sbjct: 525 WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGF 584
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM-GFLENVL 126
K + + + D ++ K+F +M D SWN+ + A+ + L
Sbjct: 585 KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQAL 644
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ F M G + + VT + + A L L +H+ + V D ++ N ++ Y
Sbjct: 645 KYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFY 704
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC+ ++ E++F + ER R VSWNSM++G + +++ MM G +LD T
Sbjct: 705 GKCEQMEDCEIIFSRMSER-RDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFT 763
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
++LS+ L +G VH+ + + DV V + L+ MY+KCG ID A F+ +
Sbjct: 764 FATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMP 823
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
R SW +MISGYA+ G +AL++F M+ G+ PD VT + ++S C G ++ G K
Sbjct: 824 VRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYK 883
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMI-AGCAL 423
F + GL + + ++D+ + G + + +P + ++ W T++ A C
Sbjct: 884 HFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRA 943
Query: 424 NGEFVEALDLFHQLMELDLRP-NRVTFL 450
NG E L M ++L P N V ++
Sbjct: 944 NGRNTE-LGQRAAKMLIELEPQNAVNYV 970
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 193/417 (46%), Gaps = 26/417 (6%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+V+ L A K+FDEM +++ SW+ ++ G+ Q + LF + G+ + V
Sbjct: 185 YVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAV 244
Query: 145 MGLTQAAIH--AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD-DLKMAELVFCG 201
+A + + L +H+F + +D+ + N +S Y+ C + A VF
Sbjct: 245 GSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVF-- 302
Query: 202 IEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV----- 255
E + R V+WNS+++ C GD + + M G L++ L S V
Sbjct: 303 DEIKFRNSVTWNSIISVYCRRGDAVS-AFKLFSVMQMEGVELNLRPNEYTLCSLVTAACS 361
Query: 256 ---CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
C L++ L GF D+ V + L++ +++ G +D A+++F + DR V+
Sbjct: 362 LADCGLVLLEQMLTRIE--KSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVT 419
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGEL--PDLVTVLSMISGCGQ-SGALELGKWFDN 369
++ G A++ +EA ++F M+ E+ LV +LS + G+
Sbjct: 420 MNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHA 479
Query: 370 YACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
Y GL D + + NAL++MY KC +I +A +F +P K VSW +MI+G N F
Sbjct: 480 YLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFE 539
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EA+ FH + + P+ + ++ L +C+ G+L G Q +G + +LD
Sbjct: 540 EAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG-----RQIHGEGFKWGLDLD 591
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 20/261 (7%)
Query: 213 NSMVAGCTYGD-----------KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
N+ VAGC + + K++ + F RH ++ +L + S + +L
Sbjct: 100 NTCVAGCDFPEMASHLFMRLLNKYNSTYTFLRHYTFSHSQLQ--QLDSEFDRYKTSSSLY 157
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+H GF DV NTLI++Y + G++ SAR LFD + + VSW+ +ISGY
Sbjct: 158 DANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYT 217
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA--LELGKWFDNYACSGGLKDN 379
Q DEA LF + ++G LP+ V S + C Q G+ ++LG + C +
Sbjct: 218 QNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSD 277
Query: 380 VMVCNALIDMYSKC-GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL- 437
+++ N L+ MYS C GSI DA +F + + V+W ++I+ G+ V A LF +
Sbjct: 278 MILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQ 337
Query: 438 ---MELDLRPNRVTFLAVLQA 455
+EL+LRPN T +++ A
Sbjct: 338 MEGVELNLRPNEYTLCSLVTA 358
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G D+V CN LI++Y + G++ AR+LF +P+K +VSW+ +I+G N EA LF
Sbjct: 170 GFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLF 229
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTG 460
++ L PN + L+AC G
Sbjct: 230 KGVISSGLLPNHFAVGSALRACQQCG 255
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 304/612 (49%), Gaps = 48/612 (7%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAY----------KIFDEMAVRDVASW 109
+ A AK + Y++ + + + + L +Y ++F M RD+ SW
Sbjct: 50 LVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSW 109
Query: 110 NAMLVGFAQMGFLENVLR----LFYN--MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV 163
N+++ +A GFL ++ + YN L I + ++ Q +H L + V
Sbjct: 110 NSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLG-LQVHGHV 168
Query: 164 HSFGIHIGV---------------------------DADVSVCNTWISSYAKCDDLKMAE 196
FG V + +V + NT I+ +C ++ +
Sbjct: 169 VKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSR 228
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
+F ++E+ +SW +M+AG T ++++ +R M +D T S+L++
Sbjct: 229 QLFYDMQEK--DSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGG 286
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
AL +G+ VH++ I + ++ V + L+ MY KC I SA +F + + VSWTAM
Sbjct: 287 VMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAM 346
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
+ GY Q G +EA+++F M+ G PD T+ S+IS C +LE G F A GL
Sbjct: 347 LVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL 406
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ V NAL+ +Y KCGSI D+ LF + VSWT +++G A G+ E L LF
Sbjct: 407 ISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFES 466
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
++ +P++VTF+ VL AC+ G ++KG I + I P DHY+CM DL R
Sbjct: 467 MLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRII--PIEDHYTCMIDLFSR 524
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G+L+EA F+ MP DA W +LL +C+ H N+EIG++ A L KLEPH+ A Y+ +
Sbjct: 525 AGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILL 584
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
++ YA G+W+ VAN+R M+ ++K PG S + F+A+D+ + S+ Y L
Sbjct: 585 SSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSEL 644
Query: 617 DCLALHSREEAY 628
+ L +E Y
Sbjct: 645 EKLNYKMVQEGY 656
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 158/364 (43%), Gaps = 59/364 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + + LFR+M+ ++E + TF + AC + L + +H +I+
Sbjct: 242 WTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYII 301
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A +F +M ++V SW AMLVG+ Q G+ E ++
Sbjct: 302 RTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVK 361
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F +M+ GI+ D T+ + + + L H + G+ + ++V N ++ Y
Sbjct: 362 IFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYG 421
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ + +F E VSW ++V+G K +++L + M+ +GF+ D T
Sbjct: 422 KCGSIEDSHRLFS--EMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTF 479
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ +LS+ C S+ G + +F+ +
Sbjct: 480 IGVLSA--C---------------------------------SRAGLVQKGNQIFESMIK 504
Query: 308 RTRV-----SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
R+ +T MI +++ G L+EA + M + PD + S++S C +E
Sbjct: 505 EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFS---PDAIGWASLLSSCRFHRNME 561
Query: 363 LGKW 366
+GKW
Sbjct: 562 IGKW 565
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 133/329 (40%), Gaps = 79/329 (24%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ +H H I + ++ ++N L+S Y+K I AR +FD + R SW ++S Y++
Sbjct: 29 KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISG----------------------------- 354
L E R+F AM D+V+ S+IS
Sbjct: 89 ACLPEMERVFHAMPTR----DMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIA 144
Query: 355 -------CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK--------------- 392
+ G + LG + G + V V + L+DMYSK
Sbjct: 145 LSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMP 204
Query: 393 ----------------CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
C I D+R+LFY + EK +SWT MIAG NG EA+DLF +
Sbjct: 205 EKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFRE 264
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLL 494
+ +L ++ TF +VL AC L++G + II+ D Y + S + D+
Sbjct: 265 MRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-----YQDNIFVGSALVDMY 319
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ +K A + M K+ W +L
Sbjct: 320 CKCKSIKSAETVFRKMNCKNVVS-WTAML 347
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/598 (30%), Positives = 294/598 (49%), Gaps = 40/598 (6%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------K 87
F K+ D EPN +TF + +C + DL ++ IH H+V S F K
Sbjct: 416 FDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGK 475
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C +D A+ IF+ + R V +WN+ML FA G E L+L+ M L G + D +T + +
Sbjct: 476 CGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAV 535
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A + + ++ D++ N +S+YA+C LK A+ F I+ +
Sbjct: 536 LDAC------QSVSEARRYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWK-N 588
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V+WN+M++G + +L + M G R + T ++ L + + L +GR +H
Sbjct: 589 NAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLH 648
Query: 268 SH----GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ IH + ++ N +I+MY KCG +D A F + +R +SW MI+ YAQ
Sbjct: 649 ARILLENIH-----EANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQH 703
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG--LKDNVM 381
G +AL F M+ G PD T L I CG +L LGK + + L+ +
Sbjct: 704 GSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPG 763
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V AL+ MY++CGS+ DA+ +F+ + +V+W+ +IA CA +G EALDLF ++
Sbjct: 764 VATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQG 823
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+P+ +TF ++ AC+ G ++ G I + + +HY CM ++LGR GKL+
Sbjct: 824 TKPDALTFSTLVAACSRRGVVKDG-GRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLE 882
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS-AAPYVEMANKY 560
EA +Q MP K+ IW LL AC ++E G A +L+P S AA +A Y
Sbjct: 883 EAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRAANRAQQLDPGSFAASMAMLAELY 942
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFP-GQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
GRW+ A +R ++ ++ P G+S +N + F +D L P LD
Sbjct: 943 GAAGRWEDAARVRKAVESRNARREPGGRSWIEVNNRVHEFGEDD-----DRLQGPRLD 995
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 257/528 (48%), Gaps = 39/528 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I + +F+ M + PN+ TF + AC+ L DL + H I
Sbjct: 195 WNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERI 254
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVAS---WNAMLVGFAQMGFLE 123
+++ F KC +D A +F++M +RDV S W ++ FA G L
Sbjct: 255 IRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLL 314
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LFY M L G+ + VT + + +A L+ + + + H+G++ D ++ ++
Sbjct: 315 EAFVLFYKMDLEGVLPNKVTFVTVLRACTT---LAQCEKIFARVKHLGLELDTTLGTAFV 371
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
S++AK DL A VF + R VVSW M+ + + Y+ M +
Sbjct: 372 STFAKLGDLAAARDVFENLGSS-RNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPN 427
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T ++++ S + PE L + +H+H + GF+ DV + L++MY KCG +DSA +F+
Sbjct: 428 AVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFE 487
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ +R+ V+W +M+S +A G + +L+L+ M G PD +T L+++ C
Sbjct: 488 NLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEAR- 546
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-IVVSWTTMIAGCA 422
YA + L+ ++ NA + Y++CGS+ +A+ F A+ K V+W MI+G A
Sbjct: 547 -----RYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLA 601
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN- 481
+GE +AL+ F ++ +R N VT+LA L+AC+ L +G Q + + N
Sbjct: 602 QHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGR-----QLHARILLENI 656
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
E + + + ++ G+ G L EA+D MP + D W T++ H
Sbjct: 657 HEANLSNAVINMYGKCGSLDEAMDEFVKMP-ERDVISWNTMIATYAQH 703
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS--DLIYSQM 75
++ W I + + +LF +M + PN +TF + +AC L+ + I++++
Sbjct: 296 SVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFARV 355
Query: 76 IH---------GHIVKSPFVKCDRLDCAYKIFDEM-AVRDVASWNAMLVGFAQMGFLENV 125
H G S F K L A +F+ + + R+V SW M+ +AQ GF+
Sbjct: 356 KHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAA 415
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L+ M + + VT M + + + + L + +H+ + G ++DV + ++
Sbjct: 416 FDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTM 472
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC + A +F ++E R+VV+WNSM++ ++ SL Y M+ G + D
Sbjct: 473 YGKCGSVDSAWSIFENLKE--RSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKI 530
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T +++L + +++ + R + + +LD++ N +S Y++CG + A+ FD I
Sbjct: 531 TYLAVLDAC---QSVSEAR---RYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAI 584
Query: 306 C-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
V+W AMISG AQ G+ +AL F+ ME G + VT L+ + C L G
Sbjct: 585 QWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRG 644
Query: 365 KWFDNYACSGGLKDNVM---VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ L +N+ + NA+I+MY KCGS+ +A + F +PE+ V+SW TMIA
Sbjct: 645 RQLHARI----LLENIHEANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATY 700
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQ-------- 472
A +G +AL+ F Q+ P+R T+L + AC L G I SI+
Sbjct: 701 AQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQ 760
Query: 473 ------------------YDDKGI---SYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
+D K + S++ L +S + + G+ EALD + M
Sbjct: 761 DPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQ 820
Query: 512 I---KSDAGIWGTLLCAC 526
+ K DA + TL+ AC
Sbjct: 821 LQGTKPDALTFSTLVAAC 838
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 255/545 (46%), Gaps = 42/545 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W + I + + L FR+M+ + +P+ F + AC+ L + IH
Sbjct: 95 WTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVV 154
Query: 78 ---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
G+ + + + KC R+ A +F+ + R++ SWNA++ AQ G ++ +++
Sbjct: 155 LAGMETQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQV 214
Query: 129 FYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M L G ++ + T + + A + L KS H I G D+ + V N+ ++ Y
Sbjct: 215 FQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYG 274
Query: 188 KCDDLKMAELVFCGIEERLR---TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
KC + A LVF + RLR +V SW ++A + ++ + M G +
Sbjct: 275 KCGSVDHARLVFEKM--RLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNK 332
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T V++L + L Q + + H G +LD ++ +S ++K GD+ +AR +F+
Sbjct: 333 VTFVTVLRACT---TLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFEN 389
Query: 305 I-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R VSWT MI YAQ+G + A L+ M+ P+ VT ++++ C + L
Sbjct: 390 LGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPR 446
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
+ + + G + +V++ L+ MY KCGS+ A +F L E+ VV+W +M++ A
Sbjct: 447 AEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFAS 506
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG + +L L+ +++ +P+++T+LAVL AC S+ + ++ E
Sbjct: 507 NGCYERSLKLYERMLLEGTKPDKITYLAVLDACQ-----------SVSEARRYAATFELE 555
Query: 484 LD--HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
LD + R G LKEA ++ K++A W ++ H + C
Sbjct: 556 LDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGE---SKQALEC 612
Query: 542 LFKLE 546
+K+E
Sbjct: 613 FWKME 617
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 238/503 (47%), Gaps = 36/503 (7%)
Query: 44 QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCD 89
Q+K++ + + + CA+ +++H HI+ S + KC
Sbjct: 16 QLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCG 75
Query: 90 RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
L A ++F+ + +V SW A++ +A+ G L VL F M+L G + D +
Sbjct: 76 CLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLT 135
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--R 207
A A L+ K++H + G++ V V N ++ Y KC + A+ VF ERL R
Sbjct: 136 ACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVF----ERLPER 190
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLV 266
+VSWN+++A D++ ++ M +G R + T VS++ + L +G+
Sbjct: 191 NLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKST 250
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR---TRVSWTAMISGYAQK 323
H I GFD + V N+L++MY KCG +D AR++F+ + R + SWT +I+ +A
Sbjct: 251 HERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHN 310
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G L EA LF+ M+ G LP+ VT ++++ C E K F GL+ + +
Sbjct: 311 GHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCE--KIFARVK-HLGLELDTTLG 367
Query: 384 NALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
A + ++K G + AR++F L + VVSWT MI A G A DL+ + +D
Sbjct: 368 TAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKR---MDC 424
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
PN VTF+AV+ +C L + I + ++ C+ + G+ G +
Sbjct: 425 EPNAVTFMAVMDSCLRPEDLPRA---EQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDS 481
Query: 503 ALDFVQSMPIKSDAGIWGTLLCA 525
A +++ +S W ++L A
Sbjct: 482 AWSIFENLKERSVVA-WNSMLSA 503
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 182/622 (29%), Positives = 307/622 (49%), Gaps = 19/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS ++ +F M++ E N+ T + + + + IHG +V
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 82 KSPFVK----CDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F C+ L Y +F +M +D+ SWN+++ F G + L
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L +M G ++VT A + +H + G+ + + N +S Y
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K ++ + V ++ R VV+WN+++ G + D +L ++ M G + TV
Sbjct: 409 KIGEMSESRRVL--LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 466
Query: 248 VSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
VS+LS+ + P L++ G+ +H++ + GF+ D V N+LI+MY+KCGD+ S++ LF+G+
Sbjct: 467 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 526
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R ++W AM++ A G +E L+L M + G D + +S + LE G+
Sbjct: 527 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 586
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
A G + + + NA DMYSKCG IG+ ++ + + SW +I+ +G
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
F E FH+++E+ ++P VTF+++L AC+H G ++KG A + D G+ P ++H
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGL--EPAIEH 704
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
C+ DLLGR G+L EA F+ MP+K + +W +LL +CKIH N++ G A L KLE
Sbjct: 705 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLE 764
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + YV +N +A GRW+ V N+R M +KK S + K +F DR H
Sbjct: 765 PEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTH 824
Query: 607 AESELTYPVLDCLALHSREEAY 628
++ Y L+ + +E Y
Sbjct: 825 PQTMEIYAKLEDIKKLIKESGY 846
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 216/460 (46%), Gaps = 18/460 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM-IHGHI 80
WN+ + V + + FR+M I+P++ + AC + + + +HG +
Sbjct: 26 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85
Query: 81 VKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
KS + + C+ K+F+EM R+V SW +++VG++ G E V+
Sbjct: 86 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 145
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
++ MR G+ + ++ + + K SL + + + G+++ ++V N+ IS
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 205
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++ A +F + E R +SWNS+ A ++S + M ++ TT
Sbjct: 206 GSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V +LLS + GR +H + GFD V V NTL+ MY+ G A ++F +
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW ++++ + G +AL L +M ++G+ + VT S ++ C E G+
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
GL N ++ NAL+ MY K G + ++R + +P + VV+W +I G A + +
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG-FLEKG 465
+AL F + + N +T ++VL AC G LE+G
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 207/442 (46%), Gaps = 11/442 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K R+ A +FD M VR+ SWN M+ G ++G + F M +GI+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 145 MGLTQAAIHAKHLSLLK---SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
L A + S+ + VH F G+ +DV V + Y + + VF
Sbjct: 62 ASLVTAC--GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ +R VVSW S++ G + + ++ ++ Y+ M G + ++ ++SS +
Sbjct: 120 MPDR--NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
GR + + G + ++V N+LISM G++D A +FD + +R +SW ++ + YA
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q G ++E+ R+F M + + TV +++S G + G+ G V
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
VCN L+ MY+ G +A +F +P K ++SW +++A +G ++AL L ++
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
N VTF + L AC F EKG + + G+ YN + + + + G+ G++
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGN--ALVSMYGKIGEMS 414
Query: 502 EALDFVQSMPIKSDAGIWGTLL 523
E+ + MP + D W L+
Sbjct: 415 ESRRVLLQMP-RRDVVAWNALI 435
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY+K G + AR LFD + R VSW M+SG + G E + F M G P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 348 VLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
+ S+++ CG+SG++ G + GL +V V A++ +Y G + +R++F +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
P++ VVSWT+++ G + GE E +D++ + + N + V+ +C
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+K G + AR LF +P + VSW TM++G G ++E ++ F ++ +L ++P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 449 FLAVLQACTHTG 460
+++ AC +G
Sbjct: 61 IASLVTACGRSG 72
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 189/592 (31%), Positives = 302/592 (51%), Gaps = 29/592 (4%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFD--EMAVRD 105
++CA ++L + +H H++K+ F KC +D + ++F+ ++
Sbjct: 37 QSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNKN 96
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V ++NA++ GF + L L+ MR +GI D T + +A ++ +H
Sbjct: 97 VFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHG 156
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+G++ DV V + +++Y K + A VF E +R VV WN+MV G +F
Sbjct: 157 LMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVF--EELPVRDVVLWNAMVNGFAQIGRF 214
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
+++L +R M NG TV +LS F GR VH G++ V V N L
Sbjct: 215 EEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNAL 274
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PD 344
I MY KC + A +F+ + + SW +++S + + GD LRLF M + + PD
Sbjct: 275 IDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPD 334
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLK--------DNVMVCNALIDMYSKCGSI 396
LVTV +++ C AL G+ Y GL D+V++ NAL+DMY+KCG++
Sbjct: 335 LVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNM 394
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DAR +F + EK V SW MI G ++G EALD+F ++ + + PN ++F+ +L AC
Sbjct: 395 RDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSAC 454
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+H G +++G G+S P ++HY+C+ D+L R G+L EA D V +MP K+D
Sbjct: 455 SHAGMVKEGLGFLSEMESKYGVS--PSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADP 512
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
W +LL AC++H + ++ E A + +LEP YV M+N Y + GR++ V R M
Sbjct: 513 VGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTM 572
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K+ VKK PG S + F DR H ++E Y L+ L +E Y
Sbjct: 573 KQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNSLTAVLQEHGY 624
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 211/441 (47%), Gaps = 33/441 (7%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ + + +N+ I + + L L+ QM+ I P+ TFP + +AC D
Sbjct: 92 HHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVV 151
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
IHG + K + ++K + AY++F+E+ VRDV WNAM+ GFAQ+
Sbjct: 152 TKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQI 211
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G E L +F M G+ TV G+ ++VH F +G ++ V V
Sbjct: 212 GRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVS 271
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA---GCTYGDKFDDSLNFYRHMM 236
N I Y KC + A VF ++E + SWNS+++ C GD + F R M
Sbjct: 272 NALIDMYGKCKCVGDALSVFEMMDE--IDIFSWNSIMSVHERC--GDHYGTLRLFDRMMG 327
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI---------HYGFDLDVSVINTLIS 287
+ + D+ TV ++L + AL+ GR +H + + H FD DV + N L+
Sbjct: 328 SSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFD-DVLLNNALMD 386
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY+KCG++ AR++F + ++ SW MI+GY G EAL +F M A +P+ ++
Sbjct: 387 MYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEIS 446
Query: 348 VLSMISGCGQSGALELGKWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
+ ++S C +G ++ G F G+ ++ +IDM + G + +A +L +
Sbjct: 447 FVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTM 506
Query: 407 PEKI-VVSWTTMIAGCALNGE 426
P K V W +++A C L+ +
Sbjct: 507 PFKADPVGWRSLLAACRLHND 527
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 9/261 (3%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID-SARVL 301
D+ T ++ L S L +G+ +H+H + F I +LI+MYSKC ID S RV
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF 87
Query: 302 -FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F ++ ++ A+I+G+ AL L+ M G PD T +I CG
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDD 147
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+ GL+ +V V +AL++ Y K +G+A +F LP + VV W M+ G
Sbjct: 148 GFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNG 207
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA----ISIIQYDDK 476
A G F EAL +F ++ + P R T VL + G + G A ++ + Y+
Sbjct: 208 FAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESG 267
Query: 477 GISYNPELDHYS---CMADLL 494
+ N +D Y C+ D L
Sbjct: 268 VVVSNALIDMYGKCKCVGDAL 288
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 189/624 (30%), Positives = 318/624 (50%), Gaps = 24/624 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ + + E K L +F+ M + +EP+ +T + + CA+L L ++ +HG I
Sbjct: 728 WSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 787
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC L + KIF+++A ++ SW AM+ + + F E LR
Sbjct: 788 RKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 847
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV-SVCNTWISSY 186
F M GI+ + VT+ + + + KSVH F I +D + S+ + Y
Sbjct: 848 SFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELY 907
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+C L E + + +R +V WNS ++ + ++L +R M+ + D T
Sbjct: 908 AECGRLGDCETILHVVGDR--NIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFT 965
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S++S+ + G+ +H H I D V N++I MYSK G ++ A +FD I
Sbjct: 966 LASIISACENTGLVRLGKQIHGHVIRTDVS-DEFVQNSVIDMYSKSGFVNLACTVFDQIK 1024
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R+ V+W +M+ G++Q G+ EA+ LF M + + VT L++I C G+LE G+W
Sbjct: 1025 HRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRW 1084
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G+KD + ALIDMY+KCG + A +F A+ + +VSW++MI ++G
Sbjct: 1085 VHHKLIVCGIKD-LFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGR 1143
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELD 485
A+ F+Q++E +PN V F+ VL AC H+G +E+G + +++ K +P +
Sbjct: 1144 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM----KLFGVSPNSE 1199
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H++C DLL R G LKEA ++ MP +DA +WG+L+ C+IH ++I + + + +
Sbjct: 1200 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDI 1259
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
Y ++N YA G W+ +R+ MK +KK PG S I+ K F A +
Sbjct: 1260 VTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYSAIEIDKKVFRFGAGEET 1319
Query: 606 HAESELTYPVLDCLALHSREEAYS 629
++E Y L L + EE YS
Sbjct: 1320 CFQTEEIYMFLGNLQNLTLEEDYS 1343
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 225/441 (51%), Gaps = 19/441 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSD-LIYSQMIHGHIVKSP--------------F 85
L+ ++ + + FP + +ACA + L + +HG I+KS +
Sbjct: 645 LYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMY 704
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
+ L A K+FD M VRD+ +W+ ++ + + LR+F M G++ D VT++
Sbjct: 705 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMI 764
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ + L + +SVH D D ++CN+ ++ Y+KC DL +E +F I +
Sbjct: 765 SVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAK- 823
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ VSW +M++ G+ + +L + M+ +G ++ T+ S+LSS + +G+
Sbjct: 824 -KNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKS 882
Query: 266 VHSHGIHYGFDLDV-SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH I D + S+ L+ +Y++CG + + + DR V W + IS YA +G
Sbjct: 883 VHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRG 942
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+ EAL LF M PD T+ S+IS C +G + LGK + + D V N
Sbjct: 943 MVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDE-FVQN 1001
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
++IDMYSK G + A +F + + +V+W +M+ G + NG +EA++LF + L
Sbjct: 1002 SVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEI 1061
Query: 445 NRVTFLAVLQACTHTGFLEKG 465
N+VTFLAV+QAC+ G LEKG
Sbjct: 1062 NKVTFLAVIQACSSIGSLEKG 1082
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 18/227 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ +I WNS + + + + LF M + +E N +TF + +AC+ + L +
Sbjct: 1024 KHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGR 1083
Query: 75 MIHGHIVK-------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H ++ + KC L+ A +F M+ R + SW++M+ + G
Sbjct: 1084 WVHHKLIVCGIKDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGR 1143
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ + + F M G + + V M + A H+ + K + GV +
Sbjct: 1144 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFAC 1203
Query: 182 WISSYAKCDDLKMAELVFCGIEER--LRTVVSWNSMVAGCTYGDKFD 226
+I ++ DLK A + I+E L W S+V GC K D
Sbjct: 1204 FIDLLSRSGDLKEA---YRTIKEMPFLADASVWGSLVNGCRIHQKMD 1247
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
+G L+ + + LI+ Y+ GS +R +F A P + +I A+D
Sbjct: 585 TGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAID 644
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHT-GFLEKGWAI--SIIQ--YDDKGISYNPELDHY 487
L+H+L+ + ++ F +VL+AC + L G + II+ DD + L
Sbjct: 645 LYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLL--- 701
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
CM G+ G L +A MP++ D W TL+ +C
Sbjct: 702 -CM---YGQTGNLSDAEKVFDGMPVR-DLVAWSTLVSSC 735
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 287/550 (52%), Gaps = 40/550 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A KIF+ + + +N M+ +A+ G L VL LF +R G+ D T + +A
Sbjct: 150 AEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGC 209
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + + V F + G+D D V N+ I Y + +++ A+ +F E R VSWN
Sbjct: 210 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLF--DEMTTRDSVSWN 267
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
M++G +F+D++N +R M G + D TVVS LS+ + L G +H++ +
Sbjct: 268 VMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VR 326
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL------ 326
+ N L+ MY+KCG ++ AR +FD + + + WT+MISGY GDL
Sbjct: 327 KELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDL 386
Query: 327 -------------------------DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
D+A+ LF M+ PD TV+++++GC Q GAL
Sbjct: 387 FDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGAL 446
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E GKW Y + +V+V ALI+MYSKCG + + E+FY L +K SWT++I G
Sbjct: 447 EQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGL 506
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A+NG+ EAL LF ++ + +P+ +TF+ VL AC+H G +E+G K
Sbjct: 507 AMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGR--RFFNSMKKVHRIE 564
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKS---DAGIWGTLLCACKIHLNIEIGEYV 538
P+++HY C+ DLLGR G L EA + +Q +PI++ ++G LL AC+IH N+++GE +
Sbjct: 565 PKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERL 624
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +E ++ + +AN YA RW+ +R MK VKK PG SL ++G
Sbjct: 625 AKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHE 684
Query: 599 FTAEDRYHAE 608
F D H E
Sbjct: 685 FLVGDPSHPE 694
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 212/452 (46%), Gaps = 50/452 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N ++ + K LLLF+Q++++ + P+ T+PF+ KA L D+ + + G IV
Sbjct: 165 YNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 224
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + + ++ A K+FDEM RD SWN M+ G+ + E+ +
Sbjct: 225 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 284
Query: 128 LFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M+ G + D TV+ A K+L L +H++ + + + N + Y
Sbjct: 285 TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTTRIDNALLDMY 343
Query: 187 AKCDDLKMAELVF--------------------CG--IEER-------LRTVVSWNSMVA 217
AKC L +A +F CG E R +R VV W +M+
Sbjct: 344 AKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMIN 403
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G FDD++ +R M + D TVV+LL+ AL QG+ +H + +
Sbjct: 404 GYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITM 463
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV V LI MYSKCG +D + +F + D+ SWT++I G A G EALRLF ME
Sbjct: 464 DVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEME 523
Query: 338 AAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G PD +T + ++S C G +E G ++F++ ++ V +ID+ + G +
Sbjct: 524 RVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLL 583
Query: 397 GDARELFYALP----EKIVVSWTTMIAGCALN 424
+A EL +P E +V + +++ C ++
Sbjct: 584 DEAEELIQEIPIENCEIVVPLYGALLSACRIH 615
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 184/408 (45%), Gaps = 43/408 (10%)
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD--DLKMAELVFCGIEERLRTVV 210
+ K + LK + S IG++ D N ++ A +L+ AE +F +++ ++
Sbjct: 106 NCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP--SLF 163
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+N MV L ++ + +G D T +L + C + QG V
Sbjct: 164 VYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFI 223
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ G DLD V N+LI MY + ++++A+ LFD + R VSW MISGY + ++A+
Sbjct: 224 VKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAI 283
Query: 331 RLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
F M+ G E PD TV+S +S C LELG NY L + NAL+DM
Sbjct: 284 NTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDM 342
Query: 390 YSKCGSIG-------------------------------DARELFYALPEKIVVSWTTMI 418
Y+KCG + +AR+LF P + VV WT MI
Sbjct: 343 YAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMI 402
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKG 477
G F +A+ LF ++ ++P++ T + +L C G LE+G W + D+
Sbjct: 403 NGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYL--DENR 460
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
I+ + + + + ++ + G + ++L+ + K D W +++C
Sbjct: 461 ITMDVVVG--TALIEMYSKCGCVDKSLEIFYELEDK-DTASWTSIICG 505
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 139/366 (37%), Gaps = 52/366 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN I V + FR+M+Q E P+ T AC L +L IH ++
Sbjct: 266 WNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 325
Query: 81 VKS-------------PFVKCDRLDCAYKIFDEMA------------------------- 102
K + KC L+ A IFDEM+
Sbjct: 326 RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARD 385
Query: 103 ------VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
VRDV W AM+ G+ Q ++ + LF M++ I+ D TV+ L
Sbjct: 386 LFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGA 445
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +H + + DV V I Y+KC + + +F +E+ + SW S++
Sbjct: 446 LEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELED--KDTASWTSII 503
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGF 275
G K ++L + M G + D T + +LS+ + +G R +S +
Sbjct: 504 CGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRI 563
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGI----CDRTRVSWTAMISGYAQKGDLDEALR 331
+ V +I + + G +D A L I C+ + A++S ++D R
Sbjct: 564 EPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGER 623
Query: 332 LFFAME 337
L +E
Sbjct: 624 LAKKLE 629
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 182/622 (29%), Positives = 307/622 (49%), Gaps = 19/622 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS ++ +F M++ E N+ T + + + + IHG +V
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Query: 82 KSPFVK----CDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F C+ L Y +F +M +D+ SWN+++ F G + L
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L +M G ++VT A + +H + G+ + + N +S Y
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K ++ + V ++ R VV+WN+++ G + D +L ++ M G + TV
Sbjct: 392 KIGEMSESRRVL--LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 449
Query: 248 VSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
VS+LS+ + P L++ G+ +H++ + GF+ D V N+LI+MY+KCGD+ S++ LF+G+
Sbjct: 450 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 509
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R ++W AM++ A G +E L+L M + G D + +S + LE G+
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 569
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
A G + + + NA DMYSKCG IG+ ++ + + SW +I+ +G
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
F E FH+++E+ ++P VTF+++L AC+H G ++KG A + D G+ P ++H
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGL--EPAIEH 687
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
C+ DLLGR G+L EA F+ MP+K + +W +LL +CKIH N++ G A L KLE
Sbjct: 688 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLE 747
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + YV +N +A GRW+ V N+R M +KK S + K +F DR H
Sbjct: 748 PEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTH 807
Query: 607 AESELTYPVLDCLALHSREEAY 628
++ Y L+ + +E Y
Sbjct: 808 PQTMEIYAKLEDIKKLIKESGY 829
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 245/529 (46%), Gaps = 33/529 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + +K E + + +++ M+ + N + + +C L D + I G +V
Sbjct: 111 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 170
Query: 82 KSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS +D A IFD+M+ RD SWN++ +AQ G +E R
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR + + TV L H H + +H + +G D+ V VCNT + YA
Sbjct: 231 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 290
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
A LVF + + ++SWNS++A + D+L M+ +G ++ T
Sbjct: 291 GAGRSVEANLVFKQMPT--KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L++ P+ +GR++H + G + + N L+SMY K G++ +R + +
Sbjct: 349 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 408
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG-ALELGKW 366
R V+W A+I GYA+ D D+AL F M G + +TV+S++S C G LE GK
Sbjct: 409 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 468
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y S G + + V N+LI MY+KCG + +++LF L + +++W M+A A +G
Sbjct: 469 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 528
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
E L L ++ + ++ +F L A LE+G + G++ +H
Sbjct: 529 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-------HGLAVKLGFEH 581
Query: 487 ----YSCMADLLGRKGKLKEALDFVQSMPIKSDAGI--WGTLLCACKIH 529
++ AD+ + G++ E V+ +P + + W L+ A H
Sbjct: 582 DSFIFNAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRH 627
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 216/460 (46%), Gaps = 18/460 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM-IHGHI 80
WN+ + V + + FR+M I+P++ + AC + + + +HG +
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 81 VKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
KS + + C+ K+F+EM R+V SW +++VG++ G E V+
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
++ MR G+ + ++ + + K SL + + + G+++ ++V N+ IS
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++ A +F + E R +SWNS+ A ++S + M ++ TT
Sbjct: 189 GSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V +LLS + GR +H + GFD V V NTL+ MY+ G A ++F +
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW ++++ + G +AL L +M ++G+ + VT S ++ C E G+
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
GL N ++ NAL+ MY K G + ++R + +P + VV+W +I G A + +
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG-FLEKG 465
+AL F + + N +T ++VL AC G LE+G
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 199/426 (46%), Gaps = 11/426 (2%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M VR+ SWN M+ G ++G + F M +GI+ + L A + S+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC--GRSGSMF 58
Query: 161 K---SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ VH F G+ +DV V + Y + + VF + +R VVSW S++
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTSLMV 116
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G + + ++ ++ Y+ M G + ++ ++SS + GR + + G +
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
++V N+LISM G++D A +FD + +R +SW ++ + YAQ G ++E+ R+F M
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+ + TV +++S G + G+ G V VCN L+ MY+ G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+A +F +P K ++SW +++A +G ++AL L ++ N VTF + L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
F EKG + + G+ YN + + + + G+ G++ E+ + MP + D
Sbjct: 357 TPDFFEKGRILHGLVVVS-GLFYNQIIGN--ALVSMYGKIGEMSESRRVLLQMP-RRDVV 412
Query: 518 IWGTLL 523
W L+
Sbjct: 413 AWNALI 418
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 292/562 (51%), Gaps = 41/562 (7%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +F+ + + WN M G A + L+L+ M +G+ +F T L
Sbjct: 23 DGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLL 82
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--------- 199
++ +K + +H + +G D D+ V + IS YA+ L+ A+ VF
Sbjct: 83 KSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142
Query: 200 ------CGIEER--------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
G R ++ VVSWN+M++G + +L ++ MM
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D +T+ +++S+ ++ GR VHS +GF ++ ++N LI +YSKCG++++A
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
L +G+ ++ +SW +I GY EAL LF M +GE P+ VT+LS++ C G
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNA------LIDMYSKCGSIGDARELFYALP-EKIVV 412
A+++G+W Y LK V+V NA LIDMY+KCG I A ++ + + +
Sbjct: 323 AIDIGRWIHVY-IDKKLK-GVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLS 380
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
+W MI G A++G A D+F ++ + + P+ +TF+ +L AC+H+G L+ G I
Sbjct: 381 TWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 440
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
D I+ P+L+HY CM DLLG G KEA + + +MP++ D IW +LL ACKIH N+
Sbjct: 441 RQDYNIT--PKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNL 498
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK-RNQVKKFPGQSLFH 591
E+GE A L K+EP + YV ++N YA G+W+ V IRT++ + KK PG S
Sbjct: 499 ELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIE 558
Query: 592 INGKTCTFTAEDRYHAESELTY 613
I+ F D+ H ++ Y
Sbjct: 559 IDSVVHEFIIGDKLHPQNREIY 580
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 218/475 (45%), Gaps = 60/475 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN R ++ L L+ M + PN TFPF+ K+CAK Q IHGH++
Sbjct: 43 WNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVL 102
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMA------------------------- 102
K S + + RL+ A K+FD +
Sbjct: 103 KLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQK 162
Query: 103 ------VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
++DV SWNAM+ G+A+ G + L LF M ++ D T+ + A +
Sbjct: 163 MFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGS 222
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L + VHS+ G +++ + N I Y+KC +++ A + G+ + V+SWN+++
Sbjct: 223 IELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN--KDVISWNTLI 280
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H ++
Sbjct: 281 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH---VYIDKK 337
Query: 277 LDVSVI-------NTLISMYSKCGDIDSARVLFDGIC-DRTRVSWTAMISGYAQKGDLDE 328
L V+ +LI MY+KCGDID+A + D +R+ +W AMI G+A G +
Sbjct: 338 LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANA 397
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALI 387
A +F M G PD +T + ++S C SG L+LG+ F + + + +I
Sbjct: 398 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMI 457
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
D+ G +A E+ +P E V W +++ C ++G +L++++
Sbjct: 458 DLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE 512
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 284/542 (52%), Gaps = 6/542 (1%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C +CA ++FD + +D+ SW M+ + + E L+LF MR+VG + + T +
Sbjct: 193 CGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASV 252
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+A + + ++ K+VH ++ V I Y K D+ A VF EE +
Sbjct: 253 LKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVF---EEMPK 309
Query: 208 T-VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
V+ W+ M+A ++ ++++ + M + T+ SLL + L G +
Sbjct: 310 DDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQI 369
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H H + G D++V V N L+ MY+KCG ++++ LF + T VSW +I GY Q G+
Sbjct: 370 HCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNG 429
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
++AL LF M VT S++ C ALE G + + N +V NAL
Sbjct: 430 EKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNAL 489
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY+KCG+I DAR +F L E VSW MI+G +++G + EAL F ++E + +P++
Sbjct: 490 IDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDK 549
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
VTF+ +L AC++ G L++G A ++ I P +HY+CM LLGR G L +A
Sbjct: 550 VTFVGILSACSNAGLLDRGQAYFKSMVEEYDIE--PCAEHYTCMVWLLGRSGHLDKAAKL 607
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
V +P + +W LL AC IH ++E+G A + ++EP A +V ++N YA RW
Sbjct: 608 VHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRW 667
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
VA+IRT MKR ++K PG S G+ F+ D H +++L +L+ L + +R E
Sbjct: 668 GNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNE 727
Query: 627 AY 628
Y
Sbjct: 728 GY 729
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 236/511 (46%), Gaps = 34/511 (6%)
Query: 40 LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------F 85
L ++ + E N + + ++C + D + +H I+K +
Sbjct: 30 FLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFY 89
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FV 142
VK D L A K+FDEM R+ S+ ++ G++Q + LF ++ G + + F
Sbjct: 90 VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFS 149
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
TV+ L +A AK L SVH+ +G D+D V I Y+ C + A VF I
Sbjct: 150 TVLKLLVSAEWAK---LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI 206
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E + +VSW MVA + F++SL + M GF+ + T S+L + V E
Sbjct: 207 E--YKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNV 264
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ VH + ++ V LI +Y K GD+D A +F+ + + W+ MI+ YAQ
Sbjct: 265 GKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQ 324
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+EA+ +F M LP+ T+ S++ C L+LG + GL NV V
Sbjct: 325 SEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFV 384
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
NAL+DMY+KCG + ++ +LF P VSW T+I G G +AL LF ++E +
Sbjct: 385 SNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQV 444
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQ----YDDKGISYNPELDHYSCMADLLGRKG 498
+ VT+ +VL+AC LE G I + YD + N +D Y+ + G
Sbjct: 445 QGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYA-------KCG 497
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+K+A V M + D W ++ +H
Sbjct: 498 NIKDA-RLVFDMLREHDQVSWNAMISGYSVH 527
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 200/421 (47%), Gaps = 18/421 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + V ++L LF +M+ +PNN TF + KAC L + +HG
Sbjct: 214 WTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAF 273
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ ++K +D A ++F+EM DV W+ M+ +AQ E +
Sbjct: 274 KTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIE 333
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR + + T+ L QA L L +H + +G+D +V V N + YA
Sbjct: 334 MFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYA 393
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ + +F E T VSWN+++ G + +L ++ M+ + T
Sbjct: 394 KCGRMENSLQLFS--ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTY 451
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + AL G +HS + +D + V N LI MY+KCG+I AR++FD + +
Sbjct: 452 SSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLRE 511
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-W 366
+VSW AMISGY+ G EAL+ F +M PD VT + ++S C +G L+ G+ +
Sbjct: 512 HDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAY 571
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F + ++ ++ + + G + A +L + +P E V+ W +++ C ++
Sbjct: 572 FKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHN 631
Query: 426 E 426
+
Sbjct: 632 D 632
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 142/322 (44%), Gaps = 18/322 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+ I ++ + + +F +M++ + PN T + +ACA L DL IH H+V
Sbjct: 315 WSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVV 374
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC R++ + ++F E SWN ++VG+ Q G E L
Sbjct: 375 KVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALI 434
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M +Q VT + +A L +HS + D + V N I YA
Sbjct: 435 LFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYA 494
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++K A LVF + E + VSWN+M++G + + ++L + M+ + D T
Sbjct: 495 KCGNIKDARLVFDMLREHDQ--VSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTF 552
Query: 248 VSLLSSFVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V +LS+ L +G+ + Y + ++ + + G +D A L I
Sbjct: 553 VGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIP 612
Query: 307 -DRTRVSWTAMISGYAQKGDLD 327
+ + + W A++S D++
Sbjct: 613 FEPSVMVWRALLSACVIHNDVE 634
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 245/436 (56%), Gaps = 5/436 (1%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D+ + NT ++ YAKC L+ A VF + +R V+W ++++G + D+ D+L F+
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQR--DFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G+ + T+ S++ + G +H + GFD +V V + L+ +Y++ G
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D A+++FD + R VSW A+I+G+A++ ++AL LF M G P + S+
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C +G LE GKW Y G K N L+DMY+K GSI DAR++F L ++ VVSW
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+++ A +G EA+ F ++ + +RPN ++FL+VL AC+H+G L++GW +
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D GI PE HY + DLLGR G L AL F++ MPI+ A IW LL AC++H N E+
Sbjct: 392 D-GIV--PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G Y A +F+L+P P+V + N YA GGRW+ A +R MK + VKK P S I
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Query: 595 KTCTFTAEDRYHAESE 610
F A D H + E
Sbjct: 509 AIHMFVANDERHPQRE 524
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 205/443 (46%), Gaps = 28/443 (6%)
Query: 6 LPPRL-NRIYRSSTINQWNSQIREAVNKNEAHK---TLLLFRQMKQNDIE----PNNLTF 57
PPRL +++ S +N + + E +++E+ K LL R ND+E P + F
Sbjct: 5 FPPRLLSQLKLSRRLNSLPAPVSED-SEDESLKFPSNDLLLR-TSSNDLEGSYIPADRRF 62
Query: 58 -PFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMA 102
+ K C LI +++H HI++S F KC L+ A K+F++M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
RD +W ++ G++Q + L F M G + T+ + +AA +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H F + G D++V V + + Y + + A+LVF +E R VSWN+++AG
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNALIAGHARR 240
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ +L ++ M+ +GFR + SL + L QG+ VH++ I G L
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NTL+ MY+K G I AR +FD + R VSW ++++ YAQ G EA+ F M G
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ ++ LS+++ C SG L+ G + G+ ++D+ + G + A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 403 FYALP-EKIVVSWTTMIAGCALN 424
+P E W ++ C ++
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMH 443
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 8/283 (2%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
+LL + L+QGR+VH+H + F D+ + NTL++MY+KCG ++ AR +F+ + R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
V+WT +ISGY+Q +AL F M G P+ T+ S+I G
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
+ G NV V +AL+D+Y++ G + DA+ +F AL + VSW +IAG A
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAIS-IIQYDDKGISYNPELDH 486
+AL+LF ++ RP+ ++ ++ AC+ TGFLE+G W + +I+ +K +++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG---- 300
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G + +A + K D W +LL A H
Sbjct: 301 -NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 188/630 (29%), Positives = 312/630 (49%), Gaps = 24/630 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + + + L QM+ + PN TF + A A S + +H IV
Sbjct: 173 WTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIV 232
Query: 82 KSPF----VKCDRLDCAY----------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F C+ L C Y +FD M VRD +WN M+ G+A +GF +
Sbjct: 233 KNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQ 292
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F+ MRL G++ + + L+ K +H + G + + + +Y+
Sbjct: 293 MFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYS 352
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A +F + + VV+W +M+ G + +++ + M G R + T
Sbjct: 353 KCSSVDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTY 411
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DSARVLFDGIC 306
++L+ P +L+ +H+ I ++ SV L+ Y K G++ +SARV + I
Sbjct: 412 STVLAG--KPSSLLSQ--LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYS-IP 466
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA-LELGK 365
+ V+W+AM++G AQ D ++A+ +F + G P+ T S+I+ C S A +E GK
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
A G + + V +AL+ MYSK G+I A ++F E+ +VSW +MI G +G
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ +AL++F + L + VTF+ VL ACTH G +E+G I D I + + +
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHI--DKKXE 644
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HYSCM DL R G +A+D + MP + IW TLL AC++H N+E+G+ A L L
Sbjct: 645 HYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSL 704
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P+ A YV ++N +A+ G W+ A++R +M +VKK G S I + +F A D
Sbjct: 705 QPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVS 764
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKWI 635
H S+L Y L+ L++ ++ Y ++
Sbjct: 765 HPFSDLVYAKLEELSIKLKDMGYQPDTNYV 794
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 216/467 (46%), Gaps = 41/467 (8%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I+ +N + + N + L LF+ + + + + LT K C L D + + +H
Sbjct: 69 ISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHC 128
Query: 79 HIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+KS F+ K + + IFDEM +++V SW ++L G+A+ G +
Sbjct: 129 QSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDE 188
Query: 125 VLRLFYNMRLVGIQAD---FVTVMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
V+ L M++ G+ + F TV+G L +I + VH+ + G + VCN
Sbjct: 189 VIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGV----QVHAMIVKNGFEFTTFVCN 244
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I Y K + + AE VF + +R V+WN M+ G + + + M G
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSM--VVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+L T + L L + +H + G++ + L+ YSKC +D A
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362
Query: 301 LFDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG---- 354
LF + D V+WTAMI G+ Q + +A+ LF M G P+ T ++++G
Sbjct: 363 LFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421
Query: 355 -CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
Q A + +++ V AL+D Y K G++ ++ +FY++P K +V+
Sbjct: 422 LLSQLHAQIIKAYYEKVPS---------VATALLDAYVKTGNVVESARVFYSIPAKDIVA 472
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
W+ M+ G A + +A+++F QL++ ++PN TF +V+ AC+ +
Sbjct: 473 WSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSA 519
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 192/442 (43%), Gaps = 12/442 (2%)
Query: 84 PFVKC-DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
PF+ R A+++FDE ++D++ +N +L F++ L LF ++ G+ D +
Sbjct: 46 PFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGL 105
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + + + VH + G DVSV + + Y K +D + +F
Sbjct: 106 TLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFD-- 163
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E ++ VVSW S+++G D+ ++ M G + T ++L + +
Sbjct: 164 EMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEG 223
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G VH+ + GF+ V N LI MY K + A +FD + R V+W MI GYA
Sbjct: 224 GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAA 283
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G E ++F M AG + + C Q L K G + +
Sbjct: 284 IGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDI 343
Query: 383 CNALIDMYSKCGSIGDARELF-YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
AL+ YSKC S+ +A +LF A VV+WT MI G N +A+DLF Q+
Sbjct: 344 RTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREG 403
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+RPN T+ VL A + L + A I Y +K S + + D + G +
Sbjct: 404 VRPNHFTYSTVL-AGKPSSLLSQLHAQIIKAYYEKVPSVA------TALLDAYVKTGNVV 456
Query: 502 EALDFVQSMPIKSDAGIWGTLL 523
E+ S+P K D W +L
Sbjct: 457 ESARVFYSIPAK-DIVAWSAML 477
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 196/642 (30%), Positives = 313/642 (48%), Gaps = 37/642 (5%)
Query: 22 WNSQIREAVNKNEAHKTLL----LFRQ--MKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
WN I A ++ +AH L LFRQ M I PN T + A + LSD +
Sbjct: 79 WNCLIN-AFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQ 137
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H VK+ + K + A +FDEM R+ SW M+ G+A
Sbjct: 138 AHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQEL 197
Query: 122 LENVLRLFYNMR--LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ LF MR G + + A ++ + VHS + G+ VSV
Sbjct: 198 ADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVA 257
Query: 180 NTWISSYAKC----DDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRH 234
N ++ Y KC D LK EL + ++W++MV G +GD D +L +
Sbjct: 258 NALVTMYVKCGSLEDALKTFEL------SGNKNSITWSAMVTGFAQFGDS-DKALKLFYD 310
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M +G T+V ++++ A+V+GR +H + + G++L + V++ L+ MY+KCG
Sbjct: 311 MHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGS 370
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
I AR F+ I V WT++I+GY Q GD + AL L+ M+ G +P+ +T+ S++
Sbjct: 371 IVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKA 430
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C AL+ GK + + +AL MY+KCGS+ D +F+ +P + V+SW
Sbjct: 431 CSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISW 490
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
MI+G + NG E L+LF ++ +P+ VTF+ +L AC+H G +++GW + +D
Sbjct: 491 NAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFD 550
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+ I+ P ++HY+CM D+L R GKL EA +F++S + +W LL A K H + ++
Sbjct: 551 EFNIA--PTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDL 608
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G Y L +L ++ YV +++ Y G+W+ V +R MMK V K PG S +
Sbjct: 609 GAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKS 668
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIP 636
T F D H + + L L ++E Y L +P
Sbjct: 669 LTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDEGYQPLLDSLP 710
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 231/448 (51%), Gaps = 17/448 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE---NVLRLFYNMRLV--GIQA 139
+ KC A +FD + +DV SWN ++ F+Q +V+ LF + + I
Sbjct: 55 YAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVP 114
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
+ T+ G+ AA + H+ + DV ++ ++ Y K + A +F
Sbjct: 115 NAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLF 174
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCP 257
+ ER VSW +M++G + D++ ++ M + G + S+LS+ C
Sbjct: 175 DEMPER--NAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCY 232
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ GR VHS + G VSV N L++MY KCG ++ A F+ ++ ++W+AM+
Sbjct: 233 MLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMV 292
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+G+AQ GD D+AL+LF+ M +GELP T++ +I+ C + A+ G+ Y+ G +
Sbjct: 293 TGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYE 352
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ V +AL+DMY+KCGSI DAR+ F + + VV WT++I G NG++ AL+L+ ++
Sbjct: 353 LQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKM 412
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLG 495
+ PN +T +VL+AC++ L++G + II+Y+ ++ E+ S ++ +
Sbjct: 413 QLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYN-----FSLEIPIGSALSAMYA 467
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ G L + MP + D W ++
Sbjct: 468 KCGSLDDGYRIFWRMPAR-DVISWNAMI 494
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 175/377 (46%), Gaps = 15/377 (3%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K L +++H+ + G + + N+ I+ YAKC A LVF I + VVSWN
Sbjct: 24 KQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINN--KDVVSWNC 81
Query: 215 MVAGCTYGDKFDDSL---NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ---GRLVHS 268
++ + SL + +R ++ + V +L F L GR H+
Sbjct: 82 LINAFSQQQAHAPSLHVMHLFRQLVM-AHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHA 140
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ DV ++L++MY K G + AR LFD + +R VSW MISGYA + DE
Sbjct: 141 LAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADE 200
Query: 329 ALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
A LF M E G+ + S++S + G+ + A GL V V NAL
Sbjct: 201 AFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANAL 260
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ MY KCGS+ DA + F K ++W+ M+ G A G+ +AL LF+ + + P+
Sbjct: 261 VTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSE 320
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
T + V+ AC+ + +G + Y K + Y +L S + D+ + G + +A
Sbjct: 321 FTLVGVINACSDACAIVEGRQMH--GYSLK-LGYELQLYVLSALVDMYAKCGSIVDARKG 377
Query: 507 VQSMPIKSDAGIWGTLL 523
+ + + D +W +++
Sbjct: 378 FECIQ-QPDVVLWTSII 393
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+ VL + C + L G+ G + + N+LI++Y+KC A +F +
Sbjct: 11 LQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDS 70
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-----DLRPNRVTFLAVLQACTHTG 460
+ K VVSW +I + +L + H +L + PN T V A +
Sbjct: 71 INNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLS 130
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
G + + + ++ S + ++ + G + EA D MP + +A W
Sbjct: 131 DSRAGRQAHALAVK---TACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP-ERNAVSWA 186
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPH 548
T++ + + E+ + A+ LFKL H
Sbjct: 187 TMISG---YASQELADE-AFELFKLMRH 210
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 275/543 (50%), Gaps = 45/543 (8%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C L A K+FDEM R V SW M+ GF Q G +E LFY M I A + G
Sbjct: 70 CADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGY 129
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
CN + D L++ + + C R
Sbjct: 130 ------------------------------CCNGRVE-----DGLRLFQEMPC------R 148
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT--TVVSLLSSFVCPEALVQGRL 265
V+SW SM+ G + +++L +R MM G + T T ++++ AL QG
Sbjct: 149 NVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQ 208
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+H G+ D + LI+ Y+ C ++ + +F G V WTA+++GY
Sbjct: 209 IHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK 268
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
++AL++F M G LP+ + S ++ C AL+ G+ A GL+ +V V N+
Sbjct: 269 HEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNS 328
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LI MY +CG++ D +F + +K +VSW ++I GCA +G + AL F+Q++ + P+
Sbjct: 329 LIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPD 388
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TF +L AC+H+G +KG + +Y + S +LDHY+CM D+LGR GKL+EA +
Sbjct: 389 EITFTGLLSACSHSGMSQKGRC--LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEE 446
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
+++MP+K+++ +W LL AC +H +E+ E A C+ LEPH ++ YV ++N YA R
Sbjct: 447 LIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASR 506
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
W V+ IR MK+ + K PG+S I G F + DR H S+ Y L+ L +E
Sbjct: 507 WSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKE 566
Query: 626 EAY 628
Y
Sbjct: 567 LGY 569
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 18/248 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE--PNNLTFPFIAKACAKLSDLIYSQMIHGH 79
W S I + + L LFRQM +E P + T+ + ACA S L IH H
Sbjct: 153 WTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAH 212
Query: 80 IVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+ K + + C +++ + ++F +V W A++ G+ E+
Sbjct: 213 VFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDA 272
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L++F M G+ + + + + L + +H+ + +G++ DV V N+ I
Sbjct: 273 LKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVM 332
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y +C +L ++F I + + +VSWNS++ GC +L F+ M+ + D
Sbjct: 333 YYRCGNLNDGVVIFKRISK--KNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEI 390
Query: 246 TVVSLLSS 253
T LLS+
Sbjct: 391 TFTGLLSA 398
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
ID AR +FD + +T MI+GYA+ D AL+LF+ M + D+V+ SMI G
Sbjct: 11 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM----PVKDVVSWNSMIKG 66
Query: 355 CGQSGALELGK-------------W---------FDNYACSGGL-----KDNVMVCNALI 387
C L + + W F + GL ++ N++I
Sbjct: 67 CFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMI 126
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM--ELDLRPN 445
Y G + D LF +P + V+SWT+MI G +G EAL LF Q+M ++++P
Sbjct: 127 YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPT 186
Query: 446 RVTFLAVLQACTHTGFLEKGWAI 468
T+ V+ AC + L +G I
Sbjct: 187 SSTYCCVITACANASALYQGVQI 209
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V + +I Y++ A +LFY +P K VVSW +MI GC + A LF ++
Sbjct: 25 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 84
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
E + V++ ++ G +E + ++N + Y C G
Sbjct: 85 ERSV----VSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCC-------NG 133
Query: 499 KLKEALDFVQSMPIKS 514
++++ L Q MP ++
Sbjct: 134 RVEDGLRLFQEMPCRN 149
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 288/564 (51%), Gaps = 10/564 (1%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+++ + K L A F + + + SWN ++ +AQ G LF+ M G+
Sbjct: 70 GNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGV 129
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ + VT+ A A++L+L + ++ ++ D V ++ I+ Y +C +++ AE
Sbjct: 130 RPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAER 189
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F E+ VV W +M++ + + +L R M G +L + T VSLL +
Sbjct: 190 AFDRSPEK--DVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACAST 247
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVI-NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
L G H G D +V+ TL+++Y KCG +D AR + D + RT VSWTAM
Sbjct: 248 MDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAM 307
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD-NYACSGG 375
I+ YAQ G+ EA+ LF M+ G P +T++S++ C G L LGK S
Sbjct: 308 IAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPS 367
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKIVVSWTTMIAGCALNGEFVEALDL 433
++M+ NA+I MY KCG++ ARE+F +P + VV+WT MI A NG EA++L
Sbjct: 368 FSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIEL 427
Query: 434 FHQ-LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
F + L++ PNRVTFL+VL AC+H G LE+ W D G+ P DHY C+ D
Sbjct: 428 FQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVP--PAGDHYCCLVD 485
Query: 493 LLGRKGKLKEALD-FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAA 551
LLGR G+L EA ++ ++D W L AC+++ ++E + A + +LEP + A
Sbjct: 486 LLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVA 545
Query: 552 PYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESEL 611
V ++N YA GR VA IR MK + VKKF G+S IN + F D H
Sbjct: 546 GRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLE 605
Query: 612 TYPVLDCLALHSREEAYSSHLKWI 635
Y L+ L +E Y K +
Sbjct: 606 IYSELERLHREIKEAGYVPDTKMV 629
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 195/447 (43%), Gaps = 30/447 (6%)
Query: 20 NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA---------KLSDL 70
+ WN + LF M + PN +T AC KL++L
Sbjct: 99 HSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNEL 158
Query: 71 IYSQM--IHGHIVKSPFV---KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
I S+ I H+ S +C ++ A + FD +DV W AM+ +A
Sbjct: 159 IASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRA 218
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 184
L L M L GI+ T + L A L + H IG+D + V T ++
Sbjct: 219 LELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVN 278
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC + A V + +RT VSW +M+A +++N ++ M G
Sbjct: 279 LYGKCGRVDDARRVLDAMP--VRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSD 336
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T++S++ S L G+ +H+ F + ++N +I+MY KCG+++ AR +F+
Sbjct: 337 ITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFE 396
Query: 304 GICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEA-AGELPDLVTVLSMISGCGQSGA 360
+ RTR V+WTAMI YAQ G +EA+ LF M G P+ VT LS++ C G
Sbjct: 397 CVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQ 456
Query: 361 LELGKWFDNYACSGGLKDNVMVCN----ALIDMYSKCGSIGDARELFYALP--EKIVVSW 414
LE W + CS G V L+D+ + G +G+A +L E VV W
Sbjct: 457 LEQA-W--EHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCW 513
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELD 441
++ C +NG+ + ++ EL+
Sbjct: 514 IAFLSACQMNGDLERSQRAAKRVSELE 540
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 13/267 (4%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H+ D + + N L+ YSK G + A++ F I SW +++ YAQ
Sbjct: 52 RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G A LF M + G P+ VT+ + + C + L LG+ + S L+ + V
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVE 171
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
++LI MY +C I +A F PEK VV WT MI+ A N AL+L ++ ++
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIK 231
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS-----CMADLLGRKG 498
T++++L AC T L G + + + + LD S + +L G+ G
Sbjct: 232 LGLPTYVSLLDACASTMDLRNG-----VAFHQRAAAIG--LDRSSTVVAGTLVNLYGKCG 284
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCA 525
++ +A + +MP+++ W ++ A
Sbjct: 285 RVDDARRVLDAMPVRTSVS-WTAMIAA 310
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 283/567 (49%), Gaps = 21/567 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I+ V+K L +F M P+ TFP + KAC+ +S L +IHG
Sbjct: 151 WNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRA 210
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ S F + C ++ A ++F+ M R V SWN M+ G+ Q G E L
Sbjct: 211 LVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEAL 270
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F +M ++ D T++ + H K L L VH + + V N + Y
Sbjct: 271 AVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMY 330
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++C + A LVF E + + V++W SM+ G +L M +G + T
Sbjct: 331 SRCGGMDEASLVFA--ETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ SLLS+ L QG+ +H+ + D DV V+ LI MY+KC + + +F
Sbjct: 389 LASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTS 448
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ V W A++SG EA+ LF +M + T S+I L+
Sbjct: 449 MKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMN 508
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKIVVSWTTMIAGCALN 424
+Y G + V LIDMYSKCGS+ A ++F +P EK ++ W+ +IAG ++
Sbjct: 509 LHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 568
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G A+ LF+Q++ ++PN +TF +VL AC+H G ++ G +++ +Y + +P
Sbjct: 569 GHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDG--LTLFKYMIENYPSSPLP 626
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+C+ DLLGR G+L EA D ++SMP + + IWG LL AC IH N+E+GE A LF+
Sbjct: 627 NHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFE 686
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVAN 571
LEP S Y+ +AN YA GRW N
Sbjct: 687 LEPESTGNYILLANIYAAVGRWKDAEN 713
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 225/476 (47%), Gaps = 24/476 (5%)
Query: 73 SQMIHGHIVKS-----------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
++++HGH + S + C + A K+FD+++ + WNA++
Sbjct: 98 TKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKM 157
Query: 116 FAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ GF + LR+F +M G D T + +A L++ +H + G +
Sbjct: 158 YVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSS 217
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
++ V N+ ++ Y C + +A VF + +R +VVSWN+M++G + +++L +
Sbjct: 218 NMFVQNSLLAMYMNCGKVGLARQVFNVMLKR--SVVSWNTMISGWFQNGRPEEALAVFNS 275
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
MM D T+VS L S + L G VH + V N L+ MYS+CG
Sbjct: 276 MMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGG 335
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D A ++F ++ ++WT+MI+GY G+ AL L AM+ G +P+ VT+ S++S
Sbjct: 336 MDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSA 395
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C L+ GK + L +V+V ALIDMY+KC ++ + ++F K V W
Sbjct: 396 CASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPW 455
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+++G N EA+ LF ++ ++ N TF +V+ A L++ +++ Y
Sbjct: 456 NALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQ--VMNLHSYL 513
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTLLCACKIH 529
+ + ++ + + D+ + G L A +P K D +W L+ +H
Sbjct: 514 VRS-GFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 568
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 206/445 (46%), Gaps = 39/445 (8%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ I + L +F M +EP++ T +C L +L +H
Sbjct: 249 SVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVH 308
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ K+ + +C +D A +F E +DV +W +M+ G+ G +
Sbjct: 309 KLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAK 368
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ L L M+L G+ + VT+ L A L KS+H++ + +D+DV V I
Sbjct: 369 SALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALI 428
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC+ + + VF + ++ V WN++++G + + +++ ++ M+ +
Sbjct: 429 DMYAKCNAVSYSFQVFA--KTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 486
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T S++ ++ L Q +HS+ + GF ++VI LI MYSKCG +D A +FD
Sbjct: 487 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 546
Query: 304 GICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG-- 359
I ++ + + W+ +I+GY G + A+ LF M +G P+ +T S++ C G
Sbjct: 547 EIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLV 606
Query: 360 --ALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WT 415
L L K+ +NY S N C ++D+ + G + +A +L ++P + S W
Sbjct: 607 DDGLTLFKYMIENYPSSP--LPNHYTC--VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWG 662
Query: 416 TMIAGCALNGEFVEALDLFHQLMEL 440
++ C L HQ +EL
Sbjct: 663 ALLGAC-----------LIHQNVEL 676
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 181/634 (28%), Positives = 317/634 (50%), Gaps = 20/634 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N+I TI+ WNS + ++ +F M++ E N+ T + +
Sbjct: 319 FNQISERDTIS-WNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDH 377
Query: 70 LIYSQMIHGHIVKSPF--VKC------------DRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ + IHG +VK F V C R + A +F +M +D+ SWN+++
Sbjct: 378 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMAS 437
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F G + L + +M G ++VT A + + +H + G+ +
Sbjct: 438 FVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDN 497
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ N +S Y K + + V ++ R VV+WN+++ G + D +L ++ +
Sbjct: 498 QIIGNALVSMYGKIGGMSTSRRVL--LQMPRRDVVAWNALIGGYAENEDPDKALAAFQTL 555
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
G + TVVS+LS+ + P L++ G+ +H++ + GF+ D V N+LI+MY+KCGD
Sbjct: 556 RVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 615
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ S++ LF+G+ +R+ ++W A+++ A G +E L+L M + G D + +S
Sbjct: 616 LSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSA 675
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
+ LE G+ A G + + + NA DMYSKCG IG+ ++ + + SW
Sbjct: 676 AAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 735
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+I+ +G F E + FH+++E+ ++P VTF+++L AC+H G +++G A +
Sbjct: 736 NILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAK 795
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D G+ P ++H C+ DLLGR G+L EA F+ MP+K + +W +LL +CKIH +++
Sbjct: 796 DFGL--EPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDR 853
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G A L KLEP + +V +N +A GRW+ V N+R M +KK S +
Sbjct: 854 GRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 913
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K +F DR H ++ Y L+ + +E Y
Sbjct: 914 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 947
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 219/460 (47%), Gaps = 18/460 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM-IHGHI 80
WN+ + V + + F++M I+P++ + AC + + + +HG +
Sbjct: 127 WNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 186
Query: 81 VKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
KS + + C+ K+F+EM R+V SW +++VG++ G E V+
Sbjct: 187 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 246
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
++ +MR G++ + ++ + + K SL + + I G+++ ++V N+ IS +
Sbjct: 247 DIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMF 306
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++ A +F I E R +SWNS+VA ++S + M ++ TT
Sbjct: 307 GNMGNVDYANYIFNQISE--RDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTT 364
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V +LLS + GR +H + GFD V V NTL+ MY+ G + A ++F +
Sbjct: 365 VSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP 424
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW ++++ + G +AL + +M G+ + VT S ++ C + G+
Sbjct: 425 TKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRI 484
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
GL DN ++ NAL+ MY K G + +R + +P + VV+W +I G A N +
Sbjct: 485 LHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENED 544
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG-FLEKG 465
+AL F L + N +T ++VL AC G LE+G
Sbjct: 545 PDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERG 584
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 193/399 (48%), Gaps = 7/399 (1%)
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
L+ ++H + + + + K R+ A +FD+M VR+ SWN M+ G ++G + F
Sbjct: 88 LVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFF 147
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK---SVHSFGIHIGVDADVSVCNTWISSY 186
M +GI+ + L A + S+ + VH F G+ +DV V + Y
Sbjct: 148 QKMCDLGIKPSSFVIASLVTAC--GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY 205
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ + VF + +R VVSW S++ G + + ++ ++ Y+ M G + +
Sbjct: 206 GVYGLVSCSRKVFEEMPDR--NVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENS 263
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++SS + GR + I G + ++V N+LISM+ G++D A +F+ I
Sbjct: 264 MSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQIS 323
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R +SW ++++ YAQ G ++E+ R+F M + + TV +++S G + G+
Sbjct: 324 ERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRG 383
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G V VCN L+ MY+ G +A +F +P K ++SW +++A +G
Sbjct: 384 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGR 443
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
++AL + ++ N VTF + L AC F +KG
Sbjct: 444 SLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKG 482
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 1/195 (0%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H+ + L V NTLI+MY+K G + AR LFD + R VSW M+SG +
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVM 381
G E + F M G P + S+++ CG+SG++ G + GL +V
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V A++ +Y G + +R++F +P++ VVSWT+++ G + GE E +D++ +
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256
Query: 442 LRPNRVTFLAVLQAC 456
+ N + V+ +C
Sbjct: 257 VECNENSMSLVISSC 271
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%)
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ G ++ +V+ N LI+MY+K G + AR LF +P + VSW TM++G
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
G ++E ++ F ++ +L ++P+ +++ AC +G
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSG 173
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 245/436 (56%), Gaps = 5/436 (1%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D+ + NT ++ YAKC L+ A VF + +R V+W ++++G + D+ D+L F+
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQR--DFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G+ + T+ S++ + G +H + GFD +V V + L+ +Y++ G
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D A+++FD + R VSW A+I+G+A++ ++AL LF M G P + S+
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C +G LE GKW Y G K N L+DMY+K GSI DAR++F L ++ VVSW
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+++ A +G EA+ F ++ + +RPN ++FL+VL AC+H+G L++GW +
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D GI PE HY + DLLGR G L AL F++ MPI+ A IW LL AC++H N E+
Sbjct: 392 D-GIV--PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G Y A +F+L+P P+V + N YA GGRW+ A +R MK + VKK P S I
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Query: 595 KTCTFTAEDRYHAESE 610
F A D H + E
Sbjct: 509 AIHMFVANDERHPQRE 524
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 205/443 (46%), Gaps = 28/443 (6%)
Query: 6 LPPRL-NRIYRSSTINQWNSQIREAVNKNEAHK---TLLLFRQMKQNDIE----PNNLTF 57
PPRL +++ S +N + + E +++E+ K LL R ND+E P + F
Sbjct: 5 FPPRLLSQLKLSRRLNSLPAPVSED-SEDESLKFPSNDLLLR-TSSNDLEGSYIPADRRF 62
Query: 58 -PFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMA 102
+ K C LI +++H HI++S F KC L+ A K+F++M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
RD +W ++ G++Q + L F M G + T+ + +AA +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H F + G D++V V + + Y + + A+LVF +E R VSWN+++AG
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNALIAGHARR 240
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ +L ++ M+ +GFR + SL + L QG+ VH++ I G L
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NTL+ MY+K G I AR +FD + R VSW ++++ YAQ G EA+ F M G
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ ++ LS+++ C SG L+ G + G+ ++D+ + G + A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 403 FYALP-EKIVVSWTTMIAGCALN 424
+P E W ++ C ++
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMH 443
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 8/283 (2%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
+LL + L+QGR+VH+H + F D+ + NTL++MY+KCG ++ AR +F+ + R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
V+WT +ISGY+Q +AL F M G P+ T+ S+I G
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
+ G NV V +AL+D+Y++ G + DA+ +F AL + VSW +IAG A
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAIS-IIQYDDKGISYNPELDH 486
+AL+LF ++ RP+ ++ ++ AC+ TGFLE+G W + +I+ +K +++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG---- 300
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G + +A + K D W +LL A H
Sbjct: 301 -NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 301/583 (51%), Gaps = 35/583 (6%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWN 110
+PN+L I+ L D YS +I HI P D A+ I M +W+
Sbjct: 51 KPNHLLSQSIS-----LKDFTYSTLIFSHITPHPN------DYAFNI---MLRATTTTWH 96
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
+ L L++ M+ + I + T + A + + + + + H +
Sbjct: 97 DYPL----------TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKL 146
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSL 229
G+D D N+ ++ Y +C + +A VF I E+ +VSWNS+++G G +
Sbjct: 147 GLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEK--DLVSWNSLLSGYAKLGFAREAVE 204
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLIS 287
F R +GF D ++VS+L + C E L GR V + G ++ + + LIS
Sbjct: 205 VFGRLREESGFEPDEMSLVSVLGA--CGELGDLELGRWVEGFVVERGMKVNSYIGSALIS 262
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSKCG++ S+R +FDG+ R ++W A IS YAQ G DEA+ LF +M+ G P+ VT
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVT 322
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ +++S C GAL+LGK D YA GL+ ++ V ALIDMY+KCGS+ A+ +F +P
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP 382
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNRVTFLAVLQACTHTGFLEKG 465
K SW MI+ A +G+ EAL LF ++ + RPN +TF+++L AC H G +++G
Sbjct: 383 RKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEG 442
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + + G+ P+++HYSCM DLL R G L EA D ++ MP K D G L A
Sbjct: 443 YRLFDMMSTLFGLV--PKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSA 500
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C+ N++IGE V L +L+P ++ Y+ + Y WD A +R +M+ N V K P
Sbjct: 501 CQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTP 560
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S + + F + D +S ++D L ++E Y
Sbjct: 561 GCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELKKEGY 603
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 202/390 (51%), Gaps = 20/390 (5%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------S 83
TL L+ QMK +I PNN TFPF+ ACA L ++ +++ H + K +
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR-LVGIQADFV 142
+ +C A K+FDE+ +D+ SWN++L G+A++GF + +F +R G + D +
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+++ + A L L + V F + G+ + + + IS Y+KC +L + +F G+
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R ++WN+ ++ D++++ + M NG + T+ ++LS+ AL
Sbjct: 281 PS--RDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ + + H G D+ V LI MY+KCG ++SA+ +F+ + + SW AMIS A
Sbjct: 339 GKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALAS 398
Query: 323 KGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 379
G EAL LF M E P+ +T +S++S C +G ++ G + FD + GL
Sbjct: 399 HGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 458
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEK 409
+ + ++D+ S+ G + +A ++ +PEK
Sbjct: 459 IEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------I 71
WN+ I A + + LF MK+N ++PN +T + ACA + L
Sbjct: 288 WNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYAT 347
Query: 72 YSQMIHGHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + H V + + KC L+ A ++F++M ++ ASWNAM+ A G + L
Sbjct: 348 HRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALS 407
Query: 128 LFYNMRLVGIQA--DFVTVMGLTQAAIHA 154
LF M G A + +T + L A +HA
Sbjct: 408 LFERMSDEGGSARPNDITFVSLLSACVHA 436
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 275/543 (50%), Gaps = 45/543 (8%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C L A K+FDEM R V SW M+ GF Q G +E LFY M I A + G
Sbjct: 86 CADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGY 145
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
CN + D L++ + + C R
Sbjct: 146 ------------------------------CCNGRVE-----DGLRLFQEMPC------R 164
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT--TVVSLLSSFVCPEALVQGRL 265
V+SW SM+ G + +++L +R MM G + T T ++++ AL QG
Sbjct: 165 NVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQ 224
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+H G+ D + LI+ Y+ C ++ + +F G V WTA+++GY
Sbjct: 225 IHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK 284
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
++AL++F M G LP+ + S ++ C AL+ G+ A GL+ +V V N+
Sbjct: 285 HEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNS 344
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LI MY +CG++ D +F + +K +VSW ++I GCA +G + AL F+Q++ + P+
Sbjct: 345 LIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPD 404
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TF +L AC+H+G +KG + +Y + S +LDHY+CM D+LGR GKL+EA +
Sbjct: 405 EITFTGLLSACSHSGMSQKGRC--LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEE 462
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
+++MP+K+++ +W LL AC +H +E+ E A C+ LEPH ++ YV ++N YA R
Sbjct: 463 LIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASR 522
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
W V+ IR MK+ + K PG+S I G F + DR H S+ Y L+ L +E
Sbjct: 523 WSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKE 582
Query: 626 EAY 628
Y
Sbjct: 583 LGY 585
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 18/248 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE--PNNLTFPFIAKACAKLSDLIYSQMIHGH 79
W S I + + L LFRQM +E P + T+ + ACA S L IH H
Sbjct: 169 WTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAH 228
Query: 80 IVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+ K + + C +++ + ++F +V W A++ G+ E+
Sbjct: 229 VFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDA 288
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L++F M G+ + + + + L + +H+ + +G++ DV V N+ I
Sbjct: 289 LKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVM 348
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y +C +L ++F I + + +VSWNS++ GC +L F+ M+ + D
Sbjct: 349 YYRCGNLNDGVVIFKRISK--KNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEI 406
Query: 246 TVVSLLSS 253
T LLS+
Sbjct: 407 TFTGLLSA 414
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
++I+ + + ID AR +FD + +T MI+GYA+ D AL+LF+ M +
Sbjct: 15 QSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM----PV 70
Query: 343 PDLVTVLSMISGCGQSGALELGK-------------W---------FDNYACSGGL---- 376
D+V+ SMI GC L + + W F + GL
Sbjct: 71 KDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM 130
Query: 377 -KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
++ N++I Y G + D LF +P + V+SWT+MI G +G EAL LF
Sbjct: 131 PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 190
Query: 436 QLM--ELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
Q+M ++++P T+ V+ AC + L +G I
Sbjct: 191 QMMGCGVEVKPTSSTYCCVITACANASALYQGVQI 225
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V + +I Y++ A +LFY +P K VVSW +MI GC + A LF ++
Sbjct: 41 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 100
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
E + V++ ++ G +E + ++N + Y C G
Sbjct: 101 ERSV----VSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCC-------NG 149
Query: 499 KLKEALDFVQSMPIKS 514
++++ L Q MP ++
Sbjct: 150 RVEDGLRLFQEMPCRN 165
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 292/588 (49%), Gaps = 23/588 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLS---------DLI 71
WN+ I+ V+ + + L + M + + + T+P + KACA L + +
Sbjct: 109 WNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENV 168
Query: 72 YSQMIHGHIVKSPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
+ ++ G + S FV+C +D A +F+ M RD+A+W AM+ G G
Sbjct: 169 EADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDW 228
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ + LF MR G AD V + + A AK L +H + GV D V N
Sbjct: 229 LDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNAL 288
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y KC L MA+ VF I + VVSW++++AG + K S+N + M+ G +
Sbjct: 289 VDMYCKCGCLGMADRVFWSIG--FKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKP 346
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T+ S+L S + G+ +H + GFD + + I YS+ G I A ++
Sbjct: 347 NSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVL 406
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ + R V W +M++GYA G+ D AL F A++ G PD VTV+S++ C L
Sbjct: 407 ELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLI 466
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
GK Y + V NALIDMY KC + +E+F + ++ ++ T+I+
Sbjct: 467 QGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFG 526
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+G EA+ LF + + P++VTF+A+L +C+H G +EKG I D IS P
Sbjct: 527 KHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNIS--P 584
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+HYSC+ DL R GKL +A FV S+ +++ + G LL AC++H ++I E VA +
Sbjct: 585 GKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRI 644
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
F+ P ++ ++N YA G W V IRTM++ +K G SL
Sbjct: 645 FEQNPSDPGYHILLSNIYANAGMWSHVTRIRTMIENRSLKNKTGNSLI 692
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARVLFDGICDR 308
LL CP L + R +H+ + G +V+ L+ Y++ G+ A + DG+ R
Sbjct: 46 LLRLRSCP-TLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMR 104
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKW- 366
+W A I G G EAL ++AM G + D T +I C G +E G+
Sbjct: 105 NSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMV 164
Query: 367 ---FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
+ G + +V V AL+DM++KCG +G+AR +F ++ E+ + +WT MI G
Sbjct: 165 RENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVH 224
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC-----THTGFLEKGWAISIIQYDDKGI 478
G++++A+ LF ++ + V V+ AC TG + G A+ DD +
Sbjct: 225 AGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCV 284
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
S N +D Y C LG ++ ++ F D W TL+
Sbjct: 285 S-NALVDMY-CKCGCLGMADRVFWSIGF-------KDVVSWSTLI 320
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 282/563 (50%), Gaps = 32/563 (5%)
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHA 154
++F M RD S+NA++ GF+ G ++L+ +R ++ +T+ + A
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL-------- 206
+L SVH + +G A V + + YAK ++ A VF +E +
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 207 ---------------------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
R ++W +MV G T ++L+ +R M G +D
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L++ AL +G+ +H++ ++ +V V + L+ MYSKC I A +F +
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R +SWTAMI GY Q +EA+R F M+ G PD T+ S+IS C +LE G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
F A GL + V NAL+ +Y KCGSI DA LF + VSWT ++ G A G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ E +DLF +++ L+P+ VTF+ VL AC+ G +EKG D GI P D
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV--PIDD 517
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DL R G+ KEA +F++ MP DA W TLL +C++ N+EIG++ A L +
Sbjct: 518 HYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLET 577
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + A YV + + +A G+W VA++R M+ QVKK PG S K F+A+D+
Sbjct: 578 DPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQS 637
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H S Y L+ L EE Y
Sbjct: 638 HPFSSRIYEKLEWLNSKMAEEGY 660
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 211/478 (44%), Gaps = 57/478 (11%)
Query: 1 MAVSSLPPRLNRIYRSSTIN---QWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLT 56
+A S L P + R++ S +N+ I + +++ L+R + ++ + P +T
Sbjct: 89 LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVK----------SPFV-------------------- 86
+ + LSD +H +++ SP V
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208
Query: 87 ---------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
+C ++ A +F M RD +W M+ G Q G L +F
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
MR G+ D T + A L K +H++ + +V V + + Y+KC
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS 328
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+++AE VF + R ++SW +M+ G ++++ + M +G + D T+ S++
Sbjct: 329 IRLAEAVFRRMT--CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVI 386
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
SS +L +G H + G ++V N L+++Y KCG I+ A LFD + +V
Sbjct: 387 SSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 446
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNY 370
SWTA+++GYAQ G E + LF M A G PD VT + ++S C ++G +E G +FD+
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSM 506
Query: 371 ACSGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNG 425
G+ D+ C +ID+YS+ G +A E +P W T+++ C L G
Sbjct: 507 QKDHGIVPIDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 151/328 (46%), Gaps = 40/328 (12%)
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D ++ N +S+ A + E +F + ER VS+N+++ G + S+ Y
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPER--DAVSYNALITGFSSTGSPARSVQLY 133
Query: 233 RHMM----YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
R ++ R+ ++ ++ +++S + AL G VH + GF V + L+ M
Sbjct: 134 RALLREESVRPTRITLSAMI-MVASALSDRAL--GHSVHCQVLRLGFGAYAFVGSPLVDM 190
Query: 289 YSK-------------------------------CGDIDSARVLFDGICDRTRVSWTAMI 317
Y+K C I+ A+ LF + DR ++WT M+
Sbjct: 191 YAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMV 250
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+G Q G EAL +F M A G D T S+++ CG ALE GK Y +
Sbjct: 251 TGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYE 310
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
DNV V +AL+DMYSKC SI A +F + + ++SWT MI G N EA+ F ++
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG 465
++P+ T +V+ +C + LE+G
Sbjct: 371 QMDGIKPDDFTLGSVISSCANLASLEEG 398
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 150/360 (41%), Gaps = 51/360 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + L +FR+M+ + + TF I AC L+ L + IH +I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 305
Query: 82 KS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A +F M R++ SW AM+VG+ Q E +R
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M++ GI+ D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F E VSW ++V G K ++++ + M+ NG + D T
Sbjct: 426 KCGSIEDAHRLF--DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTF 483
Query: 248 VSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +LS+ C A LV+ G Y FD SM G + I
Sbjct: 484 IGVLSA--CSRAGLVE------KGCDY-FD----------SMQKDHGIVP--------ID 516
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D +T MI Y++ G EA M + PD +++S C G +E+GKW
Sbjct: 517 DH----YTCMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGKW 569
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 36/249 (14%)
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D ++ N L+S + + LF + +R VS+ A+I+G++ G +++L+ A
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135
Query: 336 M-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
+ P +T+ +MI LG G V + L+DMY+K G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195
Query: 395 SIGDARELFYALPEKIVV-------------------------------SWTTMIAGCAL 423
I DAR +F + K VV +WTTM+ G
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA----ISIIQYDDKGIS 479
NG +EALD+F ++ + ++ TF ++L AC LE+G I+ Y+D
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFV 315
Query: 480 YNPELDHYS 488
+ +D YS
Sbjct: 316 GSALVDMYS 324
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 290/581 (49%), Gaps = 29/581 (4%)
Query: 73 SQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+Q++HGH++K+ + KC ++ A ++FD M R+V +W ++VGF Q
Sbjct: 86 TQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQ 145
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
++ + +F M G T+ + A + L L H++ I VD D SV
Sbjct: 146 NSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASV 205
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ S Y+KC L+ A F I E+ V+SW S V+ C L + M+
Sbjct: 206 GSALCSLYSKCGRLEDALKTFSRIREK--NVISWTSAVSACADNGAPVKGLRLFVEMIAV 263
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ + T+ S LS +L G V+S I +G++ ++ V N+L+ +Y K G I A
Sbjct: 264 DIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEA 323
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDL-----------DEALRLFFAMEAAGELPDLVT 347
LF+ + D + V+W AMI+G+AQ +L EAL+LF + +G PDL T
Sbjct: 324 HRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFT 383
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ S++S C + A+E G+ G +V+V +LI MYSKCGSI A + F +
Sbjct: 384 LSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMS 443
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ +++WT+MI G + +G +AL +F + +RPN VTF+ VL AC+H G + + A
Sbjct: 444 TRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQ--A 501
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
++ + K P +DHY CM D+ R G+L++AL+F++ M + IW + CK
Sbjct: 502 LNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCK 561
Query: 528 IHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQ 587
H N+E+G Y A L L+P YV + N Y R++ V+ +R MM+ +V K
Sbjct: 562 SHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDW 621
Query: 588 SLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
S I K +F + H +S L L+ L + Y
Sbjct: 622 SWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGY 662
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 210/459 (45%), Gaps = 47/459 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + V ++ + +F++M P+ T + AC+ L L H +I+
Sbjct: 136 WTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYII 195
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + KC RL+ A K F + ++V SW + + A G LR
Sbjct: 196 KYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLR 255
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M V I+ + T+ L L V+S I G ++++ V N+ + Y
Sbjct: 256 LFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYL 315
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAG--------------CTYGDKFDDSLNFYR 233
K + A +F +++ ++V+WN+M+AG C G ++L +
Sbjct: 316 KSGCIVEAHRLFNRMDD--ASMVTWNAMIAGHAQMMELTKDNLSACHRG---SEALKLFS 370
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ +G + D+ T+ S+LS VC A+ QG +H+ I GF DV V +LISMYSK
Sbjct: 371 KLNLSGMKPDLFTLSSVLS--VCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSK 428
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG I+ A F + RT ++WT+MI+G++Q G +AL +F M AG P+ VT + +
Sbjct: 429 CGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGV 488
Query: 352 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA----RELFYAL 406
+S C +G + +F+ +K + ++DM+ + G + A +++ Y
Sbjct: 489 LSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEP 548
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
E I W+ IAGC +G QL L L+P
Sbjct: 549 SEFI---WSNFIAGCKSHGNLELGFYAAEQL--LSLKPK 582
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 13/333 (3%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L Q + + S + VH + G + V + ++ YAKC +++ A VF + R
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRR- 131
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
VV+W +++ G + +++ ++ M+Y G V T+ ++L + ++L G
Sbjct: 132 -NVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQF 190
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H++ I Y D D SV + L S+YSKCG ++ A F I ++ +SWT+ +S A G
Sbjct: 191 HAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAP 250
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+ LRLF M A P+ T+ S +S C + +LELG + G + N+ V N+L
Sbjct: 251 VKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSL 310
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-----------EALDLFH 435
+ +Y K G I +A LF + + +V+W MIAG A E EAL LF
Sbjct: 311 LYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFS 370
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+L ++P+ T +VL C+ +E+G I
Sbjct: 371 KLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQI 403
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 121/221 (54%)
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V LL + + + ++VH H + G + V++ L+++Y+KCG+++ AR +FD +
Sbjct: 71 VPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLR 130
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V+WT ++ G+ Q A+ +F M AG P + T+ +++ C +L+LG F
Sbjct: 131 RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQF 190
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
Y + + V +AL +YSKCG + DA + F + EK V+SWT+ ++ CA NG
Sbjct: 191 HAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAP 250
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
V+ L LF +++ +D++PN T + L C LE G +
Sbjct: 251 VKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQV 291
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 145/352 (41%), Gaps = 36/352 (10%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + W S + + K L LF +M DI+PN T C ++ L
Sbjct: 230 REKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGT 289
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++ +K ++K + A+++F+ M + +WNAM+ G AQM
Sbjct: 290 QVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMM 349
Query: 121 FL-----------ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
L L+LF + L G++ D T+ + + + +H+ I
Sbjct: 350 ELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIK 409
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G +DV V + IS Y+KC ++ A F +E RT+++W SM+ G + +L
Sbjct: 410 TGFLSDVIVSTSLISMYSKCGSIERASKAF--LEMSTRTMIAWTSMITGFSQHGMSQQAL 467
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI---HYGFDLDVSVINTLI 286
+ + M G R + T V +LS+ C A + + ++ I Y + ++
Sbjct: 468 HIFEDMSLAGVRPNAVTFVGVLSA--CSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMV 525
Query: 287 SMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
M+ + G ++ A + + + W+ I+G G+L+ F+A E
Sbjct: 526 DMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELG---FYAAE 574
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 272/499 (54%), Gaps = 4/499 (0%)
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
+M L G+ +F + + + + + VH+ I V + I Y KCD
Sbjct: 48 HMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCD 107
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
L+ A VF + ER VVSW +M++ + +L+ + M+ +G + T ++
Sbjct: 108 SLRDARHVFDVMPER--NVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATV 165
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L+S + V GR +HSH I ++ V V ++L+ MY+K G I AR +F + +R
Sbjct: 166 LTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDV 225
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VS TA+ISGYAQ G +EAL LF ++ G + VT S+++ AL+ GK N+
Sbjct: 226 VSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNH 285
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
+ V++ N+LIDMYSKCG++ AR +F L E+ V+SW M+ G + +GE E
Sbjct: 286 LLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREV 345
Query: 431 LDLFHQLM-ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
L+LF+ ++ E ++P+ VT LAVL C+H G +KG I K IS P+ HY C
Sbjct: 346 LELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGK-ISVQPDSKHYGC 404
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
+ D+LGR G+++ A +FV+ MP + A IWG LL AC +H N++IGE+V + L ++EP +
Sbjct: 405 VVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPEN 464
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAES 609
A YV ++N YA GRW+ V ++R +M + V K PG+S ++ TF A D H
Sbjct: 465 AGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRR 524
Query: 610 ELTYPVLDCLALHSREEAY 628
E + L+ +E Y
Sbjct: 525 EEVSAKVQELSARFKEAGY 543
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 218/457 (47%), Gaps = 37/457 (8%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
PRL + S++ + N I + + LL M ++ N + + C +
Sbjct: 19 PRLLSTFPSNSHHVLNIHIHDT----RLREALL---HMALRGLDTNFQDYNTVLNECLRK 71
Query: 68 SDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAML 113
+ Q +H H++K+ + VKCD L A +FD M R+V SW AM+
Sbjct: 72 RAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMI 131
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
++Q G+ L LF M G + + T + + I + L + +HS I + +
Sbjct: 132 SAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYE 191
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
A V V ++ + YAK + A +F + E R VVS ++++G +++L +R
Sbjct: 192 AHVYVGSSLLDMYAKDGKIHEARGIFQCLPE--RDVVSCTAIISGYAQLGLDEEALELFR 249
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
+ G + + T S+L++ AL G+ VH+H + V + N+LI MYSKCG
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCG 309
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMI 352
++ AR +FD + +RT +SW AM+ GY++ G+ E L LF M ++ PD VTVL+++
Sbjct: 310 NLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVL 369
Query: 353 SGCGQSGALELGK--WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 409
SGC G + G ++D + ++ + ++DM + G + A E +P E
Sbjct: 370 SGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEP 429
Query: 410 IVVSWTTMIAGCALN-----GEFVEALDLFHQLMELD 441
W ++ C+++ GEFV HQL++++
Sbjct: 430 SAAIWGCLLGACSVHSNLDIGEFVG-----HQLLQIE 461
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 298/582 (51%), Gaps = 21/582 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+S I V+K EA++ L +FR + ++ + + + +AC+KL L ++ IHG+IV
Sbjct: 168 WSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIV 227
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + CD L A +IF MA + SW +M+ + + G+ +
Sbjct: 228 RRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFE 287
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISSY 186
+F M + ++ + +T+MG+ ++ L K +H + + G+ D + I Y
Sbjct: 288 IFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELY 347
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A C L E V I ER VVSWN++++ F+++L + M G LD +
Sbjct: 348 AGCGKLGYCEKVLLAIGER--NVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFS 405
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S +S+ +L GR +H + I L V N LI MYS+CG DSA ++F+ I
Sbjct: 406 LSSAISACGNVGSLQLGRQIHGYAIKRCI-LGEFVKNALIGMYSRCGFSDSAYMIFNDIK 464
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ V+W ++ISG+ Q G+ EA+ L M V LS I C LE GKW
Sbjct: 465 QKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKW 524
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G++ ++ + AL DMY+KCG + A +F+++ EK VVSW+ MI+G ++G
Sbjct: 525 LHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGR 584
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
A+ F+Q++EL ++PN +TF+ +L AC+H+G +E+G + D P +H
Sbjct: 585 IDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLMRD---FGVEPSSEH 641
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
++C+ DLL R G + A + SMP +DA + G LL C+IH +++ + L K+
Sbjct: 642 FACLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLNGCRIHQRMDMIPEIEKDLLKIR 701
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
Y ++N YA G W N R +M+R+ KK PG S
Sbjct: 702 TSDTGHYSLLSNIYAEIGNWAARENTRGIMERSGYKKVPGYS 743
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 155/538 (28%), Positives = 259/538 (48%), Gaps = 28/538 (5%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
Y++ W I+ V + + +LL+ +M N+ + + FP + +ACA D+
Sbjct: 59 YQNPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIG 118
Query: 74 QMIHGHIVK-----SPFVKCD------RLDC---AYKIFDEMAVRDVASWNAMLVGFAQM 119
+HG I+K PF++ L C A K+FD++ VRD+ SW++++ +
Sbjct: 119 AKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDK 178
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G L +F + ++ D+V ++ +T+A L L KS+H + + VD ++
Sbjct: 179 GEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALD 238
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ I Y+ CDDL AE +F + +T +SW SM+ F ++ + M+
Sbjct: 239 NSLIEMYSSCDDLYSAERIFVNMAN--KTFISWTSMIYCYNRSGWFKEAFEIFVKMLELK 296
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSA 298
+V T++ +L S L +G+L+H + + G D + LI +Y+ CG +
Sbjct: 297 VEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYC 356
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ I +R VSW ++S A++G +EAL LF M+ G + D ++ S IS CG
Sbjct: 357 EKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNV 416
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
G+L+LG+ YA + V NALI MYS+CG A +F + +K V+W ++I
Sbjct: 417 GSLQLGRQIHGYAIKRCILGE-FVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSII 475
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKG 477
+G +G +EA+ L Q+ L+ V FL+ +QAC LEKG W K
Sbjct: 476 SGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKW------LHHKL 529
Query: 478 ISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
I Y E D Y + + D+ + G L+ A SM KS W ++ +H I+
Sbjct: 530 IMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVS-WSAMISGYGMHGRID 586
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 199/409 (48%), Gaps = 22/409 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ T W S I + +F +M + +EPN +T + K+C+ LS L ++
Sbjct: 263 NKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKL 322
Query: 76 IH---------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH G ++ + C +L K+ + R+V SWN +L A+ G
Sbjct: 323 IHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQG 382
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
E L LF M+ G+ DF ++ A + L L + +H + I + + V N
Sbjct: 383 LFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGEF-VKN 441
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I Y++C A ++F I+++ + V+WNS+++G ++++ M N
Sbjct: 442 ALIGMYSRCGFSDSAYMIFNDIKQK--SSVAWNSIISGFVQSGNSIEAIHLVDQMYLNC- 498
Query: 241 RLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
L +T VV L + C + L +G+ +H I YG + D+ + L MY+KCGD+ +A
Sbjct: 499 -LKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTA 557
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F + +++ VSW+AMISGY G +D A+ F M G P+ +T ++++S C S
Sbjct: 558 EGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHS 617
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
G++E GK++ + G++ + L+D+ S+ G + A ++ ++P
Sbjct: 618 GSVEQGKFYFDLMRDFGVEPSSEHFACLVDLLSRAGDVNGAYKIINSMP 666
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 191/607 (31%), Positives = 306/607 (50%), Gaps = 41/607 (6%)
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
LI+ + H++ + +D A + D+ SWN+++ + G +N L L+
Sbjct: 23 LIHGLPLQTHLIPK-LIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLY 81
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
M + T + +A + + +H+ + +G +D+ VCN+ I Y KC
Sbjct: 82 LKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKC 141
Query: 190 ----------DDL---------------------KMAELVFCGIEERLRTVVSWNSMVAG 218
DD+ + A +F + R R VV W +M+ G
Sbjct: 142 FRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMR-RNVVCWTAMING 200
Query: 219 CTYGDKFDDSLNFYRHMMYNG--FRLDVTTVVSLLS--SFVCPEALVQGRLVHSHGIHYG 274
F + L+ +R M+ + + + T+V LLS S +C + GR +
Sbjct: 201 YGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEV--GRFLSVFIDVNK 258
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
L+ ++ LI MYSKCGD++ A +FDG+ + SW A+I+G Q G L+EA+ L+
Sbjct: 259 IPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYR 318
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M+A P+ +T+++++S C GALELG+ Y GL NV++ AL+DMY+KCG
Sbjct: 319 HMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCG 378
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
I DA +F EK V W MI G A +G+ ++L +F Q++ ++PN VTF+ VL
Sbjct: 379 KIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLS 438
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC H+G +E+G D G+S P+L+HY+CM DLLGR G LKEA + VQ+M I
Sbjct: 439 ACNHSGLVEEGRVQFSSMADKHGLS--PKLEHYACMVDLLGRAGHLKEAYELVQNMLIPP 496
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
D+ IWG LL AC+IH N+E+ + ++ + + + + ++N YA GRW VA +R
Sbjct: 497 DSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRR 556
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
+K ++KK G S ++G F ED H +S Y + L H + E Y ++ +
Sbjct: 557 QVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILVNHLKAEGYVANFDF 616
Query: 635 IPEHEAG 641
I + G
Sbjct: 617 IANNING 623
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 222/461 (48%), Gaps = 56/461 (12%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S T WNS IR +L L+ +M ++ +P+N TFPF+ KAC+ L ++ +
Sbjct: 55 SPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQ 114
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH H+++ F KC RLD A +D+M RD SWN+++ G+ Q G
Sbjct: 115 IHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQ 174
Query: 122 LENVLRLFYNMRL-------------VGIQADFVTVMGLTQAAI---------HAKHLSL 159
+E LF M + G + DFV ++ L + + A + L
Sbjct: 175 VEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCL 234
Query: 160 LKSVHSF-----GIHIGVDADVS-------VCNTWISSYAKCDDLKMAELVFCGIEERLR 207
L + + G + V DV+ + I Y+KC D++ A +F G+ +
Sbjct: 235 LSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVS--CK 292
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+ SWN+++ GC G +++++ YRHM + + T+V++LS+ AL GR VH
Sbjct: 293 NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVH 352
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ G DL+V + L+ MY+KCG ID A ++F ++ W AMI G A GD
Sbjct: 353 LYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGR 412
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNAL 386
++L +F M AG P+ VT + ++S C SG +E G+ F + A GL + +
Sbjct: 413 DSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACM 472
Query: 387 IDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIAGCALN 424
+D+ + G + +A EL + P+ I+ W +++ C ++
Sbjct: 473 VDLLGRAGHLKEAYELVQNMLIPPDSII--WGALLSACRIH 511
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 42/311 (13%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LLS +L Q +H+ + +G L +I LI ++S ID AR + D T
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPT 57
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
SW ++I Y G +L L+ M + P T ++ C G++ G+
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 370 YACSGGLKDNVMVCNALIDMYSKC-------------------------------GSIGD 398
+ G ++ VCN+LIDMY KC G +
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEK 177
Query: 399 ARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQA 455
AR+LF +P + VV WT MI G G+FVE L LF Q++ +++PN T + +L A
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSA 237
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
C+ E G +S+ D I N L + + D+ + G +++A + K+
Sbjct: 238 CSTLCNYEVGRFLSVF-IDVNKIPLNTIL--VTALIDMYSKCGDVEKAWRIFDGVSCKNL 294
Query: 516 AGIWGTLLCAC 526
W ++ C
Sbjct: 295 PS-WNAIITGC 304
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 250/457 (54%), Gaps = 2/457 (0%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
K +H G + V + IS Y KC + A +F + + V +NS+++G
Sbjct: 30 KQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYA 89
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+ D + + M G ++ T++ L+ P L G VH + +G D+D S
Sbjct: 90 LNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSS 149
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V N L++MY K G+ID R LFD + + ++W AMI+GYAQ G + L L+ ME+ G
Sbjct: 150 VGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKG 209
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
PD +T++ ++S C GAL +GK + G N + NAL++MY++CG++ AR
Sbjct: 210 FCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKAR 269
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++F +P K VVSWT +I G ++G+ A+ LF +++ ++P+ F++VL AC+H G
Sbjct: 270 DIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAG 329
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
KG + G+ P +HYSCM DLLGR G+L EA + ++SM +++D +WG
Sbjct: 330 LTNKGLDYFGVMERKYGL--RPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWG 387
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
LL ACKIH N+E+ E + +LEP + YV ++N Y G +G+ +R +M++ +
Sbjct: 388 ALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRK 447
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
+KK PG S G+ F A DR H ++ Y L+
Sbjct: 448 LKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLN 484
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 226/460 (49%), Gaps = 28/460 (6%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS-----PFV---------KCDR 90
M ++ PN TFPF K+CA LS I + +H H+ K+ PFV KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 91 LDCAYKIFDE--MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
+D A K+FDE + + +N++L G+A +++V+ LF MR +G++ + VT++GL
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
Q +L L VH F + G+D D SV N ++ Y K ++ +F E +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLF--DEMPRKG 178
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
+++WN+M+ G ++ L Y+ M GF D T+V +LSS AL G+ V
Sbjct: 179 LITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+GF + + N L++MY++CG++ AR +FDG+ ++ VSWTA+I GY G +
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALI 387
A+ LF M G PD +S++S C +G G +F GL+ + ++
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358
Query: 388 DMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
D+ + G + +AREL ++ + + W ++ C ++ A F Q++EL+ P
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELE--PTN 416
Query: 447 VTFLAVLQAC-THTGFLEKGWAISIIQY-----DDKGISY 480
+ +L T G LE + ++ D G SY
Sbjct: 417 TGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSY 456
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 5/256 (1%)
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD--GICDRTRVSWTAMIS 318
+ G+ +H H G L+ V +LISMY KC ID+AR LFD + V + +++S
Sbjct: 27 ITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLS 86
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GYA + + + LF M G + VT+L ++ CG G L LG + GL
Sbjct: 87 GYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDM 146
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ V N L+ MY K G I R+LF +P K +++W MI G A NG L+L+ ++
Sbjct: 147 DSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEME 206
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
P+ +T + VL +C H G L G + + + G S NP L++ + ++ R G
Sbjct: 207 SKGFCPDPLTLVGVLSSCAHLGALSVGKEVE-RKMEGFGFSSNPFLNN--ALVNMYARCG 263
Query: 499 KLKEALDFVQSMPIKS 514
LK+A D MP+KS
Sbjct: 264 NLKKARDIFDGMPVKS 279
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 22/315 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS + + ++LF +M++ +E N +T + + C +L +HG V
Sbjct: 81 YNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCV 140
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + +VK +DC K+FDEM + + +WNAM+ G+AQ G NVL
Sbjct: 141 KFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLE 200
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ M G D +T++G+ + H LS+ K V G ++ + N ++ YA
Sbjct: 201 LYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYA 260
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C +LK A +F G+ +++VVSW +++ G + + ++ + M+ G + D T
Sbjct: 261 RCGNLKKARDIFDGMP--VKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAF 318
Query: 248 VSLLSSFVCPEALVQGRLVHSHGI---HYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
VS+LS+ C A + + + G+ YG + ++ + + G ++ AR L +
Sbjct: 319 VSVLSA--CSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIES 376
Query: 305 ICDRTRVS-WTAMIS 318
+ R + W A++
Sbjct: 377 MQVRADGALWGALLG 391
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 184/574 (32%), Positives = 296/574 (51%), Gaps = 45/574 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A K+FDE+ V WN M+ G++++ E+ + L+ M + I+ D T L +
Sbjct: 88 ARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK 147
Query: 154 AKHLSLLKSVHSFG-IHIGVDADVSVCNTWISSYAKCDDLKMAELVFC---GIEERLRTV 209
L K + + IH +D+++ V +I ++ C + A +F G E V
Sbjct: 148 DMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWE-----V 202
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNG--FRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V+WN +++G ++++S + M + T+V +LS+ + LV G+ ++
Sbjct: 203 VTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIY 262
Query: 268 SHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFD----------------------- 303
+ I G + ++ + N LI M++ CG++D+AR +FD
Sbjct: 263 NKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRI 322
Query: 304 --------GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ +R VSWTAMI GY + E L LF M+ + PD T++S+++ C
Sbjct: 323 DLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTAC 382
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
GALELG+W Y +K++ + NALIDMY KCG++ A+++F + +K +WT
Sbjct: 383 AHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWT 442
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
MI G A NG EAL +F ++E + P+ +T++ V+ ACTH G + KG
Sbjct: 443 AMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQ 502
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
GI P L HY CM DLLGR G LKEAL+ + +MP+K ++ +WG+LL AC++H N+++
Sbjct: 503 HGIK--PNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLA 560
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E A + +LEP + A YV + N YA +W + N+R MM +KK PG SL +NG
Sbjct: 561 EMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGI 620
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
F A D+ H +S+ Y L+ + YS
Sbjct: 621 VYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYS 654
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 216/469 (46%), Gaps = 49/469 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ------M 75
WN+ I+ N + + L++ M ++I+P+ TFPF+ K K L Y + +
Sbjct: 103 WNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAV 162
Query: 76 IHGHIVKSPFVK---------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
IHG + + FV+ C ++ A KIFD +V +WN +L G+ + E
Sbjct: 163 IHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESK 222
Query: 127 RLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWI 183
RLF M + + + VT++ + A K L K +++ I G V+ ++ + N I
Sbjct: 223 RLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALI 282
Query: 184 SSYAKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNS 214
+A C ++ A VF ++ R R VSW +
Sbjct: 283 DMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTA 342
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
M+ G ++F + L +R M + + D T+VS+L++ AL G ++
Sbjct: 343 MIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNK 402
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
D + N LI MY KCG+++ A+ +F+ + + + +WTAMI G A G +EAL +F
Sbjct: 403 IKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFS 462
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKC 393
M A PD +T + ++ C G + GK +F N A G+K N+ ++D+ +
Sbjct: 463 YMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRA 522
Query: 394 GSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
G + +A E+ +P K + W +++ C ++ A ++++EL+
Sbjct: 523 GHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELE 571
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 14/275 (5%)
Query: 266 VHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+HS I G + + +I + GD+ AR +FD I + W MI GY++
Sbjct: 54 IHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRI 113
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD-NVMV 382
+ + L+ M PD T ++ G + AL+ GK N+A G D N+ V
Sbjct: 114 NCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFV 173
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD- 441
I ++S CG + AR++F VV+W +++G + E+ LF + ME
Sbjct: 174 QKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIE-MEKKC 232
Query: 442 --LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+ PN VT + +L AC+ L G I +Y +GI P L + + D+ G+
Sbjct: 233 ECVSPNSVTLVLMLSACSKLKDLVGGKCI-YNKYIKEGI-VEPNLILENALIDMFASCGE 290
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCA----CKIHL 530
+ A M + D W +++ C+I L
Sbjct: 291 MDAARGVFDEMKTR-DVISWTSIVTGFANTCRIDL 324
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 286/537 (53%), Gaps = 5/537 (0%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ + + + + A +F++M R + +WN+M++ +++ + + VL L+Y M GI+ D
Sbjct: 26 ASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMISEGIKPDSS 85
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T +A L + + + + + G DV V ++ ++ YAK + A++VF +
Sbjct: 86 TFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFDKM 145
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+R VVSW +M+ G + D+++ YR M D +V L+ +
Sbjct: 146 VKR--DVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKF 203
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G VH H + ++D + +LI MY+K G ++ A +F+GI ++ +SW A+ISG+AQ
Sbjct: 204 GLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGALISGFAQ 263
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G ++ L M+ +G PDLV+++S +S C Q G L++GK + D V
Sbjct: 264 NGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLYLDKV-S 322
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
ALIDMY+KCG++ AR LF + + ++ W MI+ ++G+ +EAL LF ++ E ++
Sbjct: 323 GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNI 382
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
P+ TF ++L AC+H+G +E+G + D I P HY+CM DLL R G+++E
Sbjct: 383 TPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKI--QPSEKHYACMVDLLSRAGQVEE 440
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A ++SM IK IW LL C H N+ IGE VA + + P YV ++N +++
Sbjct: 441 AYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILESNPDDLGIYVLVSNFFSM 500
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+WD A R +MK ++K PG S +NG F ED+ H + + +LD L
Sbjct: 501 AKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGDLQAFLMEDKNHNQYQDILQILDIL 557
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 204/420 (48%), Gaps = 19/420 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+IN WNS I N + L L+ +M I+P++ TF KAC+ L DL ++I
Sbjct: 48 SINAWNSMIIAYSRTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIW 107
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
V + + K ++D A +FD+M RDV SW M+ GFAQ G
Sbjct: 108 NQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPL 167
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ + ++ M+ + D V ++GL QA SVH + ++ D + + I
Sbjct: 168 DAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLI 227
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAK L++A VF GI ++V+SW ++++G + +L M +GF+ D
Sbjct: 228 DMYAKNGKLELASRVFEGIP--YKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPD 285
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ +++S LS+ L G+ +H H + + LD LI MY+KCG + AR LFD
Sbjct: 286 LVSLISSLSACAQVGNLKVGKSLHGHIVKRLY-LDKVSGTALIDMYAKCGALTFARALFD 344
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I R + W AMIS Y GD EAL LF M+ PD T S++S C SG +E
Sbjct: 345 QIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEE 404
Query: 364 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
G+ WF ++ + ++D+ S+ G + +A +L ++ K ++ W +++GC
Sbjct: 405 GQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGC 464
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 127/250 (50%), Gaps = 8/250 (3%)
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D + I LI+ Y + +I AR +F+ + R+ +W +MI Y++ DE L L++ M
Sbjct: 17 DANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMI 76
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+ G PD T + C L++G+ N A G +V V ++++++Y+K G +
Sbjct: 77 SEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMD 136
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A+ +F + ++ VVSWTTMI G A +G ++A+D++ + + + V + ++QACT
Sbjct: 137 KAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACT 196
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSD 515
G + G ++ + +D+ + + D+ + GKL+ A + +P KS
Sbjct: 197 SLGDSKFGLSVH-----GHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSV 251
Query: 516 AGIWGTLLCA 525
WG L+
Sbjct: 252 IS-WGALISG 260
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 190/611 (31%), Positives = 298/611 (48%), Gaps = 19/611 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + + L L+ +M P+ TFP + ++C + DL + +H H+
Sbjct: 162 SWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHV 221
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
++ + + KC ++ A K+FD M++ D SWNAM+ G + E L
Sbjct: 222 LRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGL 281
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF +M ++ + +T+ +T A+ L K +H+ + G DV+ CN+ I Y
Sbjct: 282 ELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMY 341
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ + A VF +E R +SW +M++G D +L Y M N D T
Sbjct: 342 SSLGRMGEACTVFSRMETR--DAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVT 399
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V S L++ L G +H GF + V N L+ MY+K I+ A +F +
Sbjct: 400 VASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMP 459
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D+ +SW++MI+G+ EAL F M A + P+ VT ++ ++ C +G+L GK
Sbjct: 460 DKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVK-PNSVTFIAALAACAATGSLRCGKE 518
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G+ V NAL+D+Y KCG G A F A K VVSW M+AG +G
Sbjct: 519 IHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGH 578
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL F++++E P+ VTF+A+L C+ G + +GW + + S P L H
Sbjct: 579 GDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGW--ELFHSMTEKYSIVPNLKH 636
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM DLL R G+L E +F+ MPI DA +WG LL C+IH NIE+GE A + +LE
Sbjct: 637 YACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELE 696
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+ A +V +++ YA G W V+ +R M+ ++ G S + G F +D H
Sbjct: 697 PNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESH 756
Query: 607 AESELTYPVLD 617
+ + VLD
Sbjct: 757 PQIKEINDVLD 767
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 206/375 (54%), Gaps = 3/375 (0%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A+K+F +M RDV SWN M+ G+ + GFLE L L++ M G + D T + ++
Sbjct: 148 AWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGG 207
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
L++ + VH+ + G+ +V V N ++ YAKC D++ A VF G+ L +SWN
Sbjct: 208 VPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMS--LTDCISWN 265
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+M+AG + + L + HM+ + ++ T+ S+ + L + +H+ +
Sbjct: 266 AMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKR 325
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GF DV+ N+LI MYS G + A +F + R +SWTAMISGY + G D+AL ++
Sbjct: 326 GFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVY 385
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
ME PD VTV S ++ C G L++G A S G ++V NAL++MY+K
Sbjct: 386 ALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKS 445
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
I A E+F +P+K V+SW++MIAG N + EAL F ++ D++PN VTF+A L
Sbjct: 446 KIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA-DVKPNSVTFIAAL 504
Query: 454 QACTHTGFLEKGWAI 468
AC TG L G I
Sbjct: 505 AACAATGSLRCGKEI 519
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 197/387 (50%), Gaps = 17/387 (4%)
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+FG+ +G N +S + + A VF + ER V SWN MV G
Sbjct: 126 TFGLRLG--------NAMLSMLVRFGETWHAWKVFAKMPER--DVFSWNVMVGGYGKAGF 175
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+++L+ Y M++ G R DV T +L S L GR VH+H + +G ++V V+N
Sbjct: 176 LEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNA 235
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L++MY+KCGD+++AR +FDG+ +SW AMI+G+ + + + L LF M P+
Sbjct: 236 LVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPN 295
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
L+T+ S+ G L+ K A G +V CN+LI MYS G +G+A +F
Sbjct: 296 LMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFS 355
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLE 463
+ + +SWT MI+G NG +AL+++ LME+ ++ P+ VT + L AC G L+
Sbjct: 356 RMETRDAMSWTAMISGYEKNGFPDKALEVY-ALMEVNNVSPDDVTVASALAACASLGRLD 414
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G + + I Y + + + ++ + +++A++ + MP K D W +++
Sbjct: 415 VGIKLHELATSKGFIRY---IVVANALVEMYAKSKIIEKAIEVFKYMPDK-DVISWSSMI 470
Query: 524 CA-CKIHLNIEIGEYVAYCLFKLEPHS 549
C H N E Y + L ++P+S
Sbjct: 471 AGFCFNHKNFEALYYFRHMLADVKPNS 497
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 194/614 (31%), Positives = 317/614 (51%), Gaps = 37/614 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI-YSQMIH--- 77
WNS I+ V+ LL + +M++ + ++ TFP I +A L + Y + +H
Sbjct: 117 WNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVA 176
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G+ + +VKC + A K+FDEM RD+ SW +++ G+
Sbjct: 177 MKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGF 236
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+LF MR+ ++ + VT++ + QA + ++ + +HS+ I G D SV N+ + Y
Sbjct: 237 KLFNKMRM-EMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMY 295
Query: 187 AKCDDL-KMAELVFCGIEERLRTVVSWNSMVAGCTY-GDKFDDSLNFYRHMMYNGFRLDV 244
K + E F IEER ++SWN ++A ++ GD + + F N R +V
Sbjct: 296 TKTGGSGEEVETFFSEIEER--DIISWNILIAFYSFRGDIAEVAERF------NEMRREV 347
Query: 245 TTVVSLLSSFVCPEA----LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
T+ + L+ V A L +G ++H I G D ++ L+++Y+KCG ++ +
Sbjct: 348 TSSIESLTLVVSAIANCANLSEGGMLHCSAIKTGLH-DTVLMTCLLALYAKCGALEISAQ 406
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LF I R ++W++M+SG+ Q G EA+ L+ M A+G P+ + +++ GA
Sbjct: 407 LFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGA 466
Query: 361 LELGK----WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
L+LGK +F S +D+ + +L++MY +CGSI A F + K VV+WT+
Sbjct: 467 LQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTS 526
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
MI G +G EAL F ++E +++PN VTFL++L AC+H+G + +G +
Sbjct: 527 MIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREG--CEVFHSMKW 584
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
G P+L+HY+CM DLLGR GKLKEAL + + D+ IWG LL A ++H + ++GE
Sbjct: 585 GFRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGE 644
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
Y A L +LEP + Y +N A RW V +R +M +KK PG S + G
Sbjct: 645 YAAEKLLELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMI 704
Query: 597 CTFTAEDRYHAESE 610
F + D H + E
Sbjct: 705 HGFVSGDTSHHQVE 718
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+SV + LI++YS+ D SA + + + V W ++I + G AL + M
Sbjct: 83 LSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRE 142
Query: 339 AGELPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G D T + G +E G+ A G +V N ++++Y KCGSIG
Sbjct: 143 LGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIG 202
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+A +LF + + +VSWT++I+G F LF++ M +++ PN VT + +LQAC+
Sbjct: 203 NASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNK-MRMEMEPNSVTMVVMLQACS 261
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/617 (30%), Positives = 299/617 (48%), Gaps = 25/617 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I H+ + LF++ + +D+ + TF C + DL ++IH I
Sbjct: 9 WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S + KC R+D A +F+ D SWN+++ G+ ++G + +LR
Sbjct: 69 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128
Query: 128 LFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L M G+ + + +A + + + K +H + +G+D DV V + +
Sbjct: 129 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDT 188
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC----TYGDKF-DDSLNFYRHMMYNGF 240
YAK DL+ A +F + + VV +N+M+AG T D+F ++++ + M G
Sbjct: 189 YAKIGDLEDATKIFKLMPDP--NVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 246
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ T S+L + EA G+ +H+ Y D + N L+ +YS G I+
Sbjct: 247 KPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLK 306
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F VSWT++I G+ Q G + L LF + +G PD T+ M+S C A
Sbjct: 307 CFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAA 366
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
++ G+ YA G+ + ++ N+ I MY+KCG I A F +VSW+ MI+
Sbjct: 367 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 426
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A +G EA+DLF + + PN +TFL VL AC+H G +E+G I D GI+
Sbjct: 427 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGIT- 485
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P + H +C+ DLLGR G+L EA F+ + D +W +LL AC++H + G+ VA
Sbjct: 486 -PNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAE 544
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+ +LEP +AA YV + N Y G IR +MK VKK PG S + +F
Sbjct: 545 RVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFV 604
Query: 601 AEDRYHAESELTYPVLD 617
A DR H S++ Y L+
Sbjct: 605 AGDRSHPNSQVIYVQLE 621
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 211/447 (47%), Gaps = 41/447 (9%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M R+V SWN+++ G+ QMGF V+ LF R+ ++ D T L L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+ +H+ G+ V + N+ I Y KC + A LVF +E VSWNS++AG
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADE--LDSVSWNSLIAGYV 118
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL----SSFVCPEALVQGRLVHSHGIHYGFD 276
D+ L M+ +G L+ + S L S+F ++ G+++H + G D
Sbjct: 119 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNF--SSSIECGKMLHGCAVKLGLD 176
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL-----DEALR 331
LDV V L+ Y+K GD++ A +F + D V + AMI+G+ Q + +EA+
Sbjct: 177 LDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 236
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
LFF M++ G P T S++ C A E GK L+ + + NAL+++YS
Sbjct: 237 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS 296
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
GSI D + F++ P+ VVSWT++I G NG+F L LFH+L+ +P+ T
Sbjct: 297 LSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 356
Query: 452 VLQACTHTGFLEKGWAI------------SIIQ------------YDDKGISY----NPE 483
+L AC + ++ G I +IIQ D +++ NP+
Sbjct: 357 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPD 416
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSM 510
+ +S M + G KEA+D + M
Sbjct: 417 IVSWSVMISSNAQHGCAKEAVDLFELM 443
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 195/650 (30%), Positives = 317/650 (48%), Gaps = 49/650 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI-YSQMIHGHI 80
WNS I E +L LFR M +++P + T +A AC+ + + + +H +
Sbjct: 401 WNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYT 460
Query: 81 VKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+++ + + R++ A +F +D+ SWN ++ +Q E L
Sbjct: 461 LRNGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALM 520
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT-WISSY 186
Y M + G++ D VT+ + A + L + + +H + + G + S T + Y
Sbjct: 521 YVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMY 580
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVT 245
C K LVF G+ R TV WN+++AG + D +L + M+ F + T
Sbjct: 581 CNCKQPKKGRLVFDGVVRR--TVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNAT 638
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L + V + +H + + GF D V N L+ MYS+ G ++ ++ +F +
Sbjct: 639 TFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRM 698
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA-AGE-----------------LPDLVT 347
R VSW MI+G G D+AL L M+ GE P+ VT
Sbjct: 699 NKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVT 758
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+++++ GC AL GK YA L +V V +AL+DMY+KCG + A +F +P
Sbjct: 759 LMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMP 818
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD------LRPNRVTFLAVLQACTHTGF 461
+ V++W +I ++G+ EAL+LF + +RPN VT++A+ AC+H+G
Sbjct: 819 IRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGM 878
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI---KSDAGI 518
+++G + G+ P DHY+C+ DLLGR G++KEA + + +MP K DA
Sbjct: 879 VDEGLHLFHTMKASHGVE--PRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDA-- 934
Query: 519 WGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
W +LL AC+IH ++E GE A LF LEP+ A+ YV M+N Y+ G WD +R MK
Sbjct: 935 WSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKE 994
Query: 579 NQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
V+K PG S + F + D H +S+ + L+ L+ R+E Y
Sbjct: 995 MGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGY 1044
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 147/547 (26%), Positives = 250/547 (45%), Gaps = 44/547 (8%)
Query: 20 NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
+QW +R + + + + M P+N FP + KA A + DL + IH H
Sbjct: 296 SQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAH 355
Query: 80 IVK---SP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ K +P + KC L A ++FD++ RD SWN+M+ + E
Sbjct: 356 VFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWE 415
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTW 182
L LF M + T++ + A H + + L K VH++ + G D N
Sbjct: 416 LSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNAL 474
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
++ YA+ + A+ +F + + +VSWN++++ + D+F+++L + M+ +G R
Sbjct: 475 VTMYARLGRVNDAKALFGVFDG--KDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRP 532
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARVL 301
D T+ S+L + E L GR +H + + G ++ S + T L+ MY C R++
Sbjct: 533 DGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLV 592
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGA 360
FDG+ RT W A+++GYA+ D+ALRLF M + E P+ T S++ C +
Sbjct: 593 FDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKV 652
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+ Y G + V NAL+DMYS+ G + ++ +F + ++ +VSW TMI G
Sbjct: 653 FSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITG 712
Query: 421 CALNGEFVEALDLFHQLME------------------LDLRPNRVTFLAVLQACTHTGFL 462
C + G + +AL+L H++ + +PN VT + VL C L
Sbjct: 713 CIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAAL 772
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
KG I K ++ S + D+ + G L A MPI+ + W L
Sbjct: 773 GKGKEIHAYAVKQK---LAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVL 828
Query: 523 LCACKIH 529
+ A +H
Sbjct: 829 IMAYGMH 835
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R+ W ++ T+ F D+++ Y M+ D ++L + L G+ +
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 267 HSHGIHYGF--DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
H+H +G V+V N+L++MY KCGD+ +AR +FD I DR VSW +MI+ +
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ-SGALELGKWFDNYACSGGLKDNVMVC 383
+ + +L LF M + P T++S+ C G + LGK Y G
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTN 471
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NAL+ MY++ G + DA+ LF K +VSW T+I+ + N F EAL + ++ +R
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
P+ VT +VL AC+ L G I
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREI 556
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 295/572 (51%), Gaps = 23/572 (4%)
Query: 67 LSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+S L Y+Q I I+ S F+ LD A ++F++ D +NAM+ ++ +
Sbjct: 31 ISSLSYTQFIITKIINS-FLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAI 89
Query: 127 RLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
++ MR I D T + +A + K VH + IG + D + ++ ++
Sbjct: 90 SIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNF 149
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDV 244
Y C ++ A+ VF E + VV WN+++ G DS ++ M+ R +
Sbjct: 150 YMVCGEIGNAQQVF--DEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNE 207
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHG-----IHYGFDLDVSVINTLISMYSKCGDIDSAR 299
T++ L+ + + + L GR +H + + G L+ ++IN +Y KCG +D AR
Sbjct: 208 GTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALIN----LYVKCGYLDGAR 263
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LFD I ++ V W ++I GY Q G L+E + L M + PD TV ++S C Q G
Sbjct: 264 KLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMG 323
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
A LG W +A G+ D V + ALIDMY+KCG IG AR++F + E+ V +W +++
Sbjct: 324 AFNLGNWVHRFAEKKGIWD-VFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILS 382
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A +G+ A++LF ++ E RP+ +TFLAVL AC H+G +E G QY D +
Sbjct: 383 GYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGK-----QYFDLMLQ 437
Query: 480 Y---NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
Y P ++HY CM DLLGR G L+EA + ++ M ++ + +WG LL AC IH NIEIGE
Sbjct: 438 YYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGE 497
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
+ A+ + KL YV +AN YA R++ V +R MM + K G S+ I
Sbjct: 498 WAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVV 557
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F D+ H SE Y VLD L+ + Y
Sbjct: 558 HEFVVADKMHPRSEEIYSVLDELSKKLKMAGY 589
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 209/423 (49%), Gaps = 22/423 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N+ IR + + ++ +M+ +I + T+PF+ KACA + + +HG I
Sbjct: 72 YNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVI 131
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ + ++ C + A ++FDE +DV WNA++ G+A+ G + +
Sbjct: 132 VRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSF 191
Query: 127 RLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH-IGVDADVSVCNTWIS 184
+F M V ++ + T+MGL A I +K+L L +++H + + + + V + I+
Sbjct: 192 GVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALIN 251
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC L A +F I E + V WNS++ G ++ + R M + + D
Sbjct: 252 LYVKCGYLDGARKLFDEIPE--KNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDR 309
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TV +LS+ A G VH G DV + LI MY+KCG I +AR +FD
Sbjct: 310 FTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQ 368
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +R +W A++SGYA G + A+ LF M +G PD +T L+++ C SG +E G
Sbjct: 369 MNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENG 428
Query: 365 K-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCA 422
K +FD + V ++D+ + G + +AREL + E VV W +++ C+
Sbjct: 429 KQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACS 488
Query: 423 LNG 425
++G
Sbjct: 489 IHG 491
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/623 (28%), Positives = 300/623 (48%), Gaps = 21/623 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I N+ + L+ +M ++ ++P+++TF + + L IH HI+
Sbjct: 111 WTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHII 170
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K LD A ++F EM +D S+N M+ G+ + GF E L+
Sbjct: 171 RFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALK 230
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF MR + Q T + ++ ++ + + +H I D+ V N + Y+
Sbjct: 231 LFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYS 290
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D + +A+ +F + E VS+N ++ G + +++ S + ++ + F
Sbjct: 291 KHDYIDLAKNLFDEMPEL--DGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPF 348
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++LS L GR H+ + +V V N L+ MY+KC + A +F +
Sbjct: 349 ATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAY 408
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V WTA+IS Y QKG +EAL++F M D T S + ++ LGK
Sbjct: 409 RNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQL 468
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ GL +V + L+DMY+ CGS+ DA E+F +P++ +V W +I+ + NG+
Sbjct: 469 HSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDA 528
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDH 486
F ++E L P+ V+FL+VL AC+H G +EK W + + + +P H
Sbjct: 529 EATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMT---QVYKLDPRRKH 585
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+ M D+L R G+ EA + + MP + D +W ++L +C+IH N ++ + A LFK++
Sbjct: 586 YATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMD 645
Query: 547 P-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
AA YV M+N YA G+W+ A ++ M+ VKK S I+ + FTA DR
Sbjct: 646 ALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRT 705
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H ++E ++ L +E Y
Sbjct: 706 HPQTEQIRRKINSLVELMDKEGY 728
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 214/471 (45%), Gaps = 16/471 (3%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
IAKA ++ Y +++ S +VK L A ++F+ M R+ SW M+ G++Q
Sbjct: 62 IAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQN 121
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ L+ M G++ D +T L L + +HS I G A + V
Sbjct: 122 NQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVF 181
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT-YGDKFDDSLNFYRHMMYN 238
N+ + SY K L +A +F E + VS+N M+ G T YG + +++L + M
Sbjct: 182 NSLVDSYCKTCCLDIASQLFS--EMPTKDSVSFNVMITGYTKYGFR-EEALKLFMQMRNM 238
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
F+ T ++L V E ++ G+ +H I + D+ V N L+ YSK ID A
Sbjct: 239 DFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLA 298
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ LFD + + VS+ +I+GYA G +++ LF ++ +M+S
Sbjct: 299 KNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIE 358
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
L +G+ A V V NAL+DMY+KC DA +F L + V WT +I
Sbjct: 359 LNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAII 418
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDK 476
+ G EAL +F ++ ++ ++ TF + L+A + + G + S+I+
Sbjct: 419 SIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIR---- 474
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI--WGTLLCA 525
+ + S + D+ G +K+A++ + MP D I W L+ A
Sbjct: 475 -LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP---DRNIVCWNALISA 521
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
V + + GFD ++S N + + I AR LFD + R S M+SGY + +
Sbjct: 33 VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92
Query: 326 LDEALRLFFAMEAAGEL-------------------------------PDLVTVLSMISG 354
L A LF +M + E+ PD +T +++SG
Sbjct: 93 LFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSG 152
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
+ L+ ++ G +++V N+L+D Y K + A +LF +P K VS+
Sbjct: 153 FDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSF 212
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
MI G G EAL LF Q+ +D +P+ TF A+L
Sbjct: 213 NVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML 251
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 282/563 (50%), Gaps = 32/563 (5%)
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHA 154
++F M RD S+NA++ GF+ G ++L+ +R ++ +T+ + A
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL-------- 206
+L SVH + +G A V + + YAK ++ A VF +E +
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 207 ---------------------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
R ++W +MV G T ++L+ +R M G +D
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L++ AL +G+ +H++ ++ +V V + L+ MYSKC I A +F +
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R +SWTAMI GY Q +EA+R F M+ G PD T+ S+IS C +LE G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
F A GL + V NAL+ +Y KCGSI DA LF + VSWT ++ G A G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ E +DLF +++ L+P+ VTF+ VL AC+ G +EKG D GI P D
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV--PIDD 517
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DL R G+ KEA +F++ MP DA W TLL +C++ N+EIG++ A L +
Sbjct: 518 HYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLET 577
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + A YV + + +A G+W VA++R M+ QVKK PG S K F+A+D+
Sbjct: 578 DPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQS 637
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H S Y L+ L EE Y
Sbjct: 638 HPFSSRIYEKLEWLNSKMAEEGY 660
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 211/478 (44%), Gaps = 57/478 (11%)
Query: 1 MAVSSLPPRLNRIYRSSTIN---QWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLT 56
+A S L P + R++ S +N+ I + +++ L+R + ++ + P +T
Sbjct: 89 LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVK----------SPFV-------------------- 86
+ + LSD +H +++ SP V
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208
Query: 87 ---------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
+C ++ A +F M RD +W M+ G Q G L +F
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
MR G+ D T + A L K +H++ + +V V + + Y+KC
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS 328
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+++AE VF + R ++SW +M+ G ++++ + M +G + D T+ S++
Sbjct: 329 IRLAEAVFRRMT--CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVI 386
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
SS +L +G H + G ++V N L+++Y KCG I+ A LFD + +V
Sbjct: 387 SSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 446
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNY 370
SWTA+++GYAQ G E + LF M A G PD VT + ++S C ++G +E G +FD+
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSM 506
Query: 371 ACSGGLK--DNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNG 425
G+ D+ C +ID+YS+ G +A E +P W T+++ C L G
Sbjct: 507 QKDHGIVPIDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 151/328 (46%), Gaps = 40/328 (12%)
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D ++ N +S+ A + E +F + ER VS+N+++ G + S+ Y
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPER--DAVSYNALITGFSSTGSPARSVQLY 133
Query: 233 RHMM----YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
R ++ R+ ++ ++ +++S + AL G VH + GF V + L+ M
Sbjct: 134 RALLREESVRPTRITLSAMI-MVASALSDRAL--GHSVHCQVLRLGFGAYAFVGSPLVDM 190
Query: 289 YSK-------------------------------CGDIDSARVLFDGICDRTRVSWTAMI 317
Y+K C I+ A+ LF + DR ++WT M+
Sbjct: 191 YAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMV 250
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+G Q G EAL +F M A G D T S+++ CG ALE GK Y +
Sbjct: 251 TGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYE 310
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
DNV V +AL+DMYSKC SI A +F + + ++SWT MI G N EA+ F ++
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG 465
++P+ T +V+ +C + LE+G
Sbjct: 371 QMDGIKPDDFTLGSVISSCANLASLEEG 398
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 150/360 (41%), Gaps = 51/360 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + L +FR+M+ + + TF I AC L+ L + IH +I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 305
Query: 82 KS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A +F M R++ SW AM+VG+ Q E +R
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M++ GI+ D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F E VSW ++V G K ++++ + M+ NG + D T
Sbjct: 426 KCGSIEDAHRLF--DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTF 483
Query: 248 VSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +LS+ C A LV+ G Y FD SM G + I
Sbjct: 484 IGVLSA--CSRAGLVE------KGCDY-FD----------SMQKDHGIVP--------ID 516
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D +T MI Y++ G EA M + PD +++S C G +E+GKW
Sbjct: 517 DH----YTCMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGKW 569
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 36/249 (14%)
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D ++ N L+S + + LF + +R VS+ A+I+G++ G +++L+ A
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135
Query: 336 M-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
+ P +T+ +MI LG G V + L+DMY+K G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195
Query: 395 SIGDARELFYALPEKIVV-------------------------------SWTTMIAGCAL 423
I DAR +F + K VV +WTTM+ G
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA----ISIIQYDDKGIS 479
NG +EALD+F ++ + ++ TF ++L AC LE+G I+ Y+D
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFV 315
Query: 480 YNPELDHYS 488
+ +D YS
Sbjct: 316 GSALVDMYS 324
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 306/629 (48%), Gaps = 26/629 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ + + ++ WNS I H+ + LF++ + +D+ + TF C + D
Sbjct: 77 FDRMPKRNVVS-WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLD 135
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L ++IH I S + KC R+D A +F+ D SWN+++ G
Sbjct: 136 LRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAG 195
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGIHIGVD 173
+ ++G + +LRL M G+ + + +A + + + K +H + +G+D
Sbjct: 196 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 255
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC----TYGDKF-DDS 228
DV V + +YAK DL+ A +F + + VV +N+M+AG T D+F +++
Sbjct: 256 LDVVVGTALLDTYAKIGDLEDATKIFKLMPDP--NVVMYNAMIAGFLQMETMADEFANEA 313
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
+ + M G + T S+L + EA G+ +H+ Y D + N L+ +
Sbjct: 314 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 373
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
YS G I+ F VSWT++I G+ Q G + L LF + +G PD T+
Sbjct: 374 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 433
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
M+S C A++ G+ YA G+ + ++ N+ I MY+KCG I A F
Sbjct: 434 SIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKN 493
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+VSW+ MI+ A +G EA+DLF + + PN +TFL VL AC+H G +E+G
Sbjct: 494 PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 553
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
I D GI+ P + H +C+ DLLGR G+L EA F+ + D +W +LL AC++
Sbjct: 554 FEIMKKDHGIT--PNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRV 611
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
H + G+ VA + +LEP +AA YV + N Y G IR +MK VKK PG S
Sbjct: 612 HKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLS 671
Query: 589 LFHINGKTCTFTAEDRYHAESELTYPVLD 617
+ +F A DR H S++ Y L+
Sbjct: 672 WIEVGNVVHSFVAGDRSHPNSQVIYVQLE 700
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 239/509 (46%), Gaps = 55/509 (10%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIF 98
+++T+ + + + LI+ ++ H H++K+ F KC D A K+F
Sbjct: 18 DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D M R+V SWN+++ G+ QMGF V+ LF R+ ++ D T L
Sbjct: 78 DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
L + +H+ G+ V + N+ I Y KC + A LVF +E VSWNS++AG
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADE--LDSVSWNSLIAG 195
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL----SSFVCPEALVQGRLVHSHGIHYG 274
D+ L M+ +G L+ + S L S+F ++ G+++H + G
Sbjct: 196 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNF--SSSIECGKMLHGCAVKLG 253
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL-----DEA 329
DLDV V L+ Y+K GD++ A +F + D V + AMI+G+ Q + +EA
Sbjct: 254 LDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEA 313
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+ LFF M++ G P T S++ C A E GK L+ + + NAL+++
Sbjct: 314 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 373
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
YS GSI D + F++ P+ VVSWT++I G NG+F L LFH+L+ +P+ T
Sbjct: 374 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 433
Query: 450 LAVLQACTHTGFLEKGWAI------------SIIQ------------YDDKGISY----N 481
+L AC + ++ G I +IIQ D +++ N
Sbjct: 434 SIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKN 493
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSM 510
P++ +S M + G KEA+D + M
Sbjct: 494 PDIVSWSVMISSNAQHGCAKEAVDLFELM 522
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 110/220 (50%)
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
Y G LD T L+ +L+ G+L H H I F + ++N L+ MY KCG+ D
Sbjct: 12 YLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETD 71
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A+ LFD + R VSW ++ISGY Q G E + LF + D T + +S CG
Sbjct: 72 VAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG 131
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
++ L LG+ GL V++ N+LIDMY KCG I AR +F + E VSW +
Sbjct: 132 RTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+IAG G E L L +++ L N + L+AC
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKAC 231
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 252/455 (55%), Gaps = 3/455 (0%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ + +G+ +D V NT I+ Y+ C A V + VSWN+++AG +
Sbjct: 115 LHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHA 174
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ +L + M LD T+++ L + + G+L H+ + GF+++ +
Sbjct: 175 GLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMG 234
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
++LISMY+KCG ++ AR +FDG+ DR V WT+MISGY Q G EA++LF M+ AG
Sbjct: 235 SSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVK 294
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
D T+ +++S CGQ GAL+LG++ Y GL ++ V N+LIDMYSKCG I A ++
Sbjct: 295 VDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGF 461
F + ++ SWT +I G A NG EALDLF Q+ E + PN +TFL VL +C+H G
Sbjct: 355 FCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGL 414
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
+E+G+ GI+ P ++HY CM DLLGR L EA F++ MPI DA +W +
Sbjct: 415 VEQGYRHFHRMSSIYGIA--PRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRS 472
Query: 522 LLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV 581
LL AC+ + + EYVA + LEP+ V ++ YA RW +RT + +
Sbjct: 473 LLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRK 532
Query: 582 KKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
K PG S ++G F A D H E+E Y L
Sbjct: 533 TKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTL 567
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 145/286 (50%), Gaps = 10/286 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D ++ + LS+ ++V G +H+ + G D V+NTLI+MYS C +AR +
Sbjct: 91 IDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSV 150
Query: 302 FD----GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
D G D VSW +I+GY G ++AL+ F M + D VT+L+ + C +
Sbjct: 151 LDSAPKGASD--TVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACAR 208
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+ +++GK + G + N + ++LI MY+KCG + DAR +F +P++ V WT+M
Sbjct: 209 TCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSM 268
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+G G+ EA+ LF + ++ + T V+ +C G L+ G + D G
Sbjct: 269 ISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVH-AYCDIHG 327
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ ++ + + D+ + G +K+A D M +K D W ++
Sbjct: 328 L--GKDISVKNSLIDMYSKCGDIKKAYDIFCGM-VKRDNFSWTVII 370
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 16/238 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S WN+ I ++ +K L F QM + + +++T ACA+ + ++
Sbjct: 158 ASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKL 217
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H +V + F KC +++ A +IFD M R+ W +M+ G+ Q+G
Sbjct: 218 CHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQ 277
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ ++LF +M++ G++ D T+ + + L L + VH++ G+ D+SV N+
Sbjct: 278 SKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNS 337
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
I Y+KC D+K A +FCG+ +R SW ++ G ++L+ + M G
Sbjct: 338 LIDMYSKCGDIKKAYDIFCGMVKRDN--FSWTVIIMGFAANGLSGEALDLFAQMEEEG 393
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 181/612 (29%), Positives = 297/612 (48%), Gaps = 57/612 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFP-FIAKACAKLSDLIYSQMIHGHI 80
WNS + E L F +M + D+ NL F+ S + ++ + +
Sbjct: 174 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 233
Query: 81 VK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
V F + ++ A ++FD+M +R+V +WNAM+ + Q ++ + LF M
Sbjct: 234 VSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP-- 291
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
+ + ++ + + L + + + + V A ++ IS Y + + A
Sbjct: 292 --EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAM----ISGYVQNKRMDDA 345
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
+F I +R VV WN+M+AG + + D++L+ ++ M+
Sbjct: 346 RQIFNQIS--IRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKK----------------- 386
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
D+ NT+++ Y++ G +D+A +F+ + ++ VSW +
Sbjct: 387 ----------------------DIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNS 424
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+ISG Q G +AL+ F M G+ PD T +S C AL++GK G
Sbjct: 425 LISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSG 484
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
++ V NALI MY+KCGSI A LF + VVSW ++IA ALNG EAL LFH
Sbjct: 485 YATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFH 544
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
++ + P+ VTF+ +L AC+H G +++G + + + + + P +HY+CM DLLG
Sbjct: 545 KMEVEGVAPDEVTFVGILSACSHVGLIDQG--LKLFKCMVQAYNIEPLAEHYACMVDLLG 602
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G+L+EA V+ M I ++AGIWG LL AC+IH N+E+ ++ A L + EPH + YV
Sbjct: 603 RAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVL 662
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
++N A GRWD VA +R +MK +K PG S + + F +ED H + +
Sbjct: 663 LSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHI 722
Query: 616 LDCLALHSREEA 627
L L H R A
Sbjct: 723 LRSLTAHMRNTA 734
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 195/458 (42%), Gaps = 84/458 (18%)
Query: 71 IYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++ M H + V S F K R+ A ++FD M R++ SWN+M+ + +E
Sbjct: 37 VFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEA 96
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+LF M + + + + T+ L K+ + F + + + CN ++
Sbjct: 97 RQLFDKMPTRDLYSWTLMITCYTRNG------ELAKARNLFNL-LPYKWNPVCCNAMVAG 149
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM---------- 235
YAK A +F + + +VSWNSM+ G T + L F+ M
Sbjct: 150 YAKNRQFDEARRLFDAMPA--KDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNL 207
Query: 236 MYNGF-----------------RLDVTTVVSLLSSFVCPEALVQGR-------------- 264
M +GF + + V++L F + + R
Sbjct: 208 MVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAW 267
Query: 265 --LVHSHGIHYGFDLDVSVI-----------NTLISMYSKCGDIDSARVLFDGICDRTRV 311
++ ++ + D +S+ T+I+ Y + G +D AR L + + R
Sbjct: 268 NAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVA 327
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG----ALELGKWF 367
+ TAMISGY Q +D+A ++F + + D+V +MI+G Q G AL L K
Sbjct: 328 AQTAMISGYVQNKRMDDARQIFNQI----SIRDVVCWNTMIAGYSQCGRMDEALHLFKQM 383
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+K +++ N ++ Y++ G + A ++F + EK +VSW ++I+G NG +
Sbjct: 384 --------VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSY 435
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
++AL F + +P++ TF L +C H L+ G
Sbjct: 436 LDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVG 473
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 22/299 (7%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N++IS ++K G I AR LFDG+ R VSW +MI+ Y ++EA +LF M
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTR--- 106
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
DL + MI+ ++G L + N K N + CNA++ Y+K +AR L
Sbjct: 107 -DLYSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRL 162
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F A+P K +VSW +M+ G NGE L F ++ E D+ V++ ++ G L
Sbjct: 163 FDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDV----VSWNLMVDGFVEVGDL 218
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
W ++ +K NP + M R GK+ EA MPI++ W +
Sbjct: 219 NSSW-----EFFEK--IPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVA-WNAM 270
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV 581
+ A N + E ++ + E +S + + + N Y G+ D + M V
Sbjct: 271 IAAYV--QNCHVDEAISLFMEMPEKNSIS-WTTVINGYVRMGKLDEARQLLNQMPYRNV 326
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
N + N++I ++K G I DAR+LF +P++ +VSW +MIA N EA LF ++
Sbjct: 45 NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMP 104
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELDHYSCMADLLG-- 495
DL ++ ++ T G L K + +++ Y +NP C A + G
Sbjct: 105 TRDL----YSWTLMITCYTRNGELAKARNLFNLLPY-----KWNP----VCCNAMVAGYA 151
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
+ + EA +MP K D W ++L + + +G
Sbjct: 152 KNRQFDEARRLFDAMPAK-DLVSWNSMLTGYTRNGEMRLG 190
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 193/560 (34%), Positives = 294/560 (52%), Gaps = 44/560 (7%)
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ GF + G + L LF + + AD T++ +AA + S +++H G
Sbjct: 103 MMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSS--SPAEAIHCVAFKRG 160
Query: 172 -VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
+ V V N + YA L A +F + +R VVSW ++V G G D++
Sbjct: 161 FIGQSVLVGNALVHMYASSMSLPDARKLFDEMADR--DVVSWTTLVDGYARGGLPDEAWR 218
Query: 231 -FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
F R ++ G + T+V+ S+ L GR+VH + G + V++ N L+ M+
Sbjct: 219 VFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMF 278
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD---------------------- 327
KCG + SA+ +FDG+ + SWT+M+S YA+ GDL+
Sbjct: 279 GKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVA 338
Query: 328 ---------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLK 377
EA+R+F M AAG P T++S++S C Q G L++G+ +D Y S ++
Sbjct: 339 AYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVE 398
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
V + NA IDM++KCG +G A LF + +K VVSW TMI AL+G+ EAL LF +
Sbjct: 399 LTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKF 458
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLG 495
+ + P+ +T++ VL AC+H+G + +G + + I Y P +HY+CM DLLG
Sbjct: 459 KAIGIFPDEITYIGVLSACSHSGLVSEGR----YHFKEMKIVYGIEPRAEHYACMIDLLG 514
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
+ G L+EA + +SMP+ +D WG LL AC++H N+EIG+ A L L+P + YV
Sbjct: 515 KVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVL 574
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
M+ YA +W V IRT+M+ VKK PG S ++GK F A D HA SE Y
Sbjct: 575 MSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAA 634
Query: 616 LDCLALHSREEAYSSHLKWI 635
L+ + LHS+ E Y SH+ +
Sbjct: 635 LENIYLHSKLEGYISHVSCV 654
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 203/450 (45%), Gaps = 50/450 (11%)
Query: 24 SQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD-------------L 70
+ +R + + L LFR++ ++ + + T F KA S
Sbjct: 102 TMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSSSPAEAIHCVAFKRGF 161
Query: 71 IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
I ++ G+ + + L A K+FDEMA RDV SW ++ G+A+ G + R+F
Sbjct: 162 IGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFC 221
Query: 131 NMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN--------- 180
M + G + VT++ AA L L + VH + GV V++ N
Sbjct: 222 RMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKC 281
Query: 181 -------------------TW---ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
+W +S+YAKC DL+ A +F I R VSW+ MVA
Sbjct: 282 GCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPN--RNAVSWSCMVAA 339
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR-LVHSHGIHYGFDL 277
+ + ++++ + M+ G T+VS+LS+ L GR L ++ + + +L
Sbjct: 340 YSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVEL 399
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
V++ N I M++KCGD+ +A LF + D+ VSW MI +A G +EAL LF +
Sbjct: 400 TVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFK 459
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
A G PD +T + ++S C SG + G++ F G++ +ID+ K G +
Sbjct: 460 AIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLL 519
Query: 397 GDARELFYALPEKI-VVSWTTMIAGCALNG 425
+A E+ ++P W ++ C ++G
Sbjct: 520 EEAFEVARSMPVGADEAGWGALLNACRMHG 549
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 161/351 (45%), Gaps = 42/351 (11%)
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+M+ G K +L +R ++ + D T+V + + + + +H
Sbjct: 102 TMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSSSPAEA--IHCVAFKR 159
Query: 274 GF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GF V V N L+ MY+ + AR LFD + DR VSWT ++ GYA+ G DEA R+
Sbjct: 160 GFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRV 219
Query: 333 FFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
F M A G P+ VT+++ S GQ G L LG+ G++ +V + NAL+DM+
Sbjct: 220 FCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFG 279
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF------------------------ 427
KCG + A+E+F +P K V SWT+M++ A G+
Sbjct: 280 KCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAA 339
Query: 428 -------VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
EA+ +F+ ++ + P T ++VL AC G L+ G + YD +S+
Sbjct: 340 YSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCL----YDAYIVSH 395
Query: 481 NPEL--DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
EL + + D+ + G + A ++M K+ W T++ A +H
Sbjct: 396 KVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVS-WNTMIVAHALH 445
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + KC L+ A K+F E+ R+ SW+ M+ ++Q E +R+F +M G++
Sbjct: 307 SAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDA 366
Query: 143 TVMGLTQAAIHAKHLSLLKSVH-SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T++ + A L + + ++ ++ + V+ V++ N +I +AKC D+ A +F
Sbjct: 367 TLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRN 426
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+E+ + VVSWN+M+ + +++L+ ++ G D T + +LS+ +
Sbjct: 427 MED--KNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVS 484
Query: 262 QGRL-VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDGICDRTRVSWTAMISG 319
+GR I YG + +I + K G ++ A V W A+++
Sbjct: 485 EGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNA 544
Query: 320 YAQKGDLD 327
G+++
Sbjct: 545 CRMHGNVE 552
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL-----IYSQM 75
W+ + N + + +F M +EP + T + ACA+L L +Y
Sbjct: 332 SWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAY 391
Query: 76 IHGHIVK----------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
I H V+ F KC + A ++F M ++V SWN M+V A G E
Sbjct: 392 IVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEA 451
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
L LF + +GI D +T +G+ A H+ +S
Sbjct: 452 LHLFQKFKAIGIFPDEITYIGVLSACSHSGLVS 484
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/628 (30%), Positives = 318/628 (50%), Gaps = 32/628 (5%)
Query: 32 KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI----YSQMIHGHIVKSPFV- 86
+++ + +F++MK + +E N ++ + A + S+L Q +H +++++ V
Sbjct: 329 QHQGEEAAKIFKEMK-DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVD 387
Query: 87 --------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM 132
KC+ +D A IF M +D SWN+++ G E + F+ M
Sbjct: 388 VWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTM 447
Query: 133 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDL 192
R G+ +V+ + + L + +H GI G+D DVSV N ++ YA+ D +
Sbjct: 448 RRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCM 507
Query: 193 KMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+ + VF + E + VSWNS + T ++ ++ MM G++ + T +++L
Sbjct: 508 EEYQKVFFLMPEYDQ--VSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINIL 565
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT-R 310
S+ L GR +H+ + + D ++ NTL++ Y KC ++ ++F + +R
Sbjct: 566 SAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDE 625
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW AMISGY G L +A+ L + M G+ D T+ +++S C LE G
Sbjct: 626 VSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHAC 685
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
A L+ V+V +AL+DMY+KCG I A F +P + + SW +MI+G A +G +A
Sbjct: 686 AIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKA 745
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYS 488
L LF Q+ + P+ VTF+ VL AC+H G +++G+ + G Y P ++H+S
Sbjct: 746 LKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFE----HFKSMGEVYELAPRIEHFS 801
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC--KIHLNIEIGEYVAYCLFKLE 546
CM DLLGR G +K+ +F+++MP+ +A IW T+L AC N E+G A L +LE
Sbjct: 802 CMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELE 861
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P +A YV ++N +A GG+W+ V R M+ +VKK G S + F A D+ H
Sbjct: 862 PLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTH 921
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKW 634
E E Y L + R+ Y K+
Sbjct: 922 PEKEKIYDKLKEIMNKMRDLGYVPETKY 949
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 198/419 (47%), Gaps = 22/419 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + + + F M++N + P+ + +CA L ++ Q IHG +
Sbjct: 424 WNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGI 483
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA-QMGFLENVL 126
K + + + D ++ K+F M D SWN+ + A + +
Sbjct: 484 KCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAI 543
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ F M G + + VT + + A L L + +H+ + V D ++ NT ++ Y
Sbjct: 544 KYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFY 603
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC+ ++ E++F + ER R VSWN+M++G + ++ MM G RLD T
Sbjct: 604 GKCEQMEDCEIIFSRMSER-RDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFT 662
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++LS+ L +G VH+ I + +V V + L+ MY+KCG ID A F+ +
Sbjct: 663 LATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMP 722
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R SW +MISGYA+ G +AL+LF M+ G+LPD VT + ++S C G ++ G
Sbjct: 723 VRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEG-- 780
Query: 367 FDNYACSG---GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
F+++ G L + + ++D+ + G + E +P + W T++ C
Sbjct: 781 FEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGAC 839
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 242/527 (45%), Gaps = 33/527 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE----PNNLTFPFIAKACAKLSD- 69
+ T WNS I + +A LF M++ E PN TF + L D
Sbjct: 205 KMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDC 264
Query: 70 --LIYSQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAML 113
+ QM+ I KS FVK +D A IF++M R+ + N ++
Sbjct: 265 GLTLLEQML-ARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLM 323
Query: 114 VGFAQMGFLENVLRLFYNMR-LVGIQADFVTVM--GLTQAAIHAKHLSLLKSVHSFGIHI 170
VG A+ E ++F M+ LV I A V+ T+ + + + VH++ I
Sbjct: 324 VGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRN 383
Query: 171 G-VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
VD + + N ++ YAKC+ + A +F + + VSWNS+++G + ++F++++
Sbjct: 384 ALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPS--KDTVSWNSIISGLDHNERFEEAV 441
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M NG +V+S LSS ++ G+ +H GI G DLDVSV N L+++Y
Sbjct: 442 ACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLY 501
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYA-QKGDLDEALRLFFAMEAAGELPDLVTV 348
++ ++ + +F + + +VSW + I A + + +A++ F M AG P+ VT
Sbjct: 502 AETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTF 561
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
++++S LELG+ + D+ + N L+ Y KC + D +F + E
Sbjct: 562 INILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSE 621
Query: 409 KI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ VSW MI+G NG +A+ L +M+ R + T VL AC LE+G
Sbjct: 622 RRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGME 681
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
+ E+ S + D+ + GK+ A F + MP+++
Sbjct: 682 VHACAIR---ACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRN 725
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 195/406 (48%), Gaps = 33/406 (8%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
FV+ L A K+FDEM +++ SW+ ++ G+AQ G + LF + G+ + +
Sbjct: 84 FVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAI 143
Query: 145 MGLTQA--AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD-DLKMAELVFCG 201
+A + L L +H +D+ + N +S Y+ C + A VF
Sbjct: 144 GSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEE 203
Query: 202 IEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVT-------TVVSLLSS 253
I +++T SWNS+++ C GD + + M L+ ++V++ S
Sbjct: 204 I--KMKTSASWNSIISVYCRRGDAI-SAFKLFSSMQREATELNCRPNEYTFCSLVTVACS 260
Query: 254 FV-CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
V C L++ L F D+ V + L+S +++ G IDSA+++F+ + DR V+
Sbjct: 261 LVDCGLTLLEQMLARIE--KSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVT 318
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS-----MISGCGQSGALELGKW- 366
++ G A++ +EA ++F E+ DLV + + ++S + L+ GK
Sbjct: 319 MNGLMVGLARQHQGEEAAKIF------KEMKDLVEINASSYAVLLSAFTEFSNLKEGKRK 372
Query: 367 ---FDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
Y L D +++ NAL+++Y+KC +I +AR +F +P K VSW ++I+G
Sbjct: 373 GQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLD 432
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
N F EA+ FH + + P++ + ++ L +C G++ G I
Sbjct: 433 HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQI 478
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G DV NTL++++ + G++ SA+ LFD + + VSW+ ++SGYAQ G DEA LF
Sbjct: 69 GLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLF 128
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGA--LELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+ +AG LP+ + S + C + G L+LG ++++ N L+ MYS
Sbjct: 129 RGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYS 188
Query: 392 KC-GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM----ELDLRPNR 446
C SI DAR +F + K SW ++I+ G+ + A LF + EL+ RPN
Sbjct: 189 HCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNE 248
Query: 447 VTFLAVLQ-ACT 457
TF +++ AC+
Sbjct: 249 YTFCSLVTVACS 260
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 159/326 (48%), Gaps = 28/326 (8%)
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
H HL + K+ G+ +DV CNT ++ + + +L A+ +F + + + +VSW
Sbjct: 59 HQLHLQIYKT--------GLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQ--KNLVSW 108
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF--VCPEALVQGRLVHSHG 270
+ +V+G D++ +R ++ G + + S L + + P L G +H
Sbjct: 109 SCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLI 168
Query: 271 IHYGFDLDVSVINTLISMYSKC-GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ D+ + N L+SMYS C ID AR +F+ I +T SW ++IS Y ++GD A
Sbjct: 169 SKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISA 228
Query: 330 LRLFFAME-AAGEL---PD------LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+LF +M+ A EL P+ LVTV + CG + L + S +KD
Sbjct: 229 FKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLT---LLEQMLARIEKSSFVKD- 284
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V +AL+ +++ G I A+ +F + ++ V+ ++ G A + EA +F ++ +
Sbjct: 285 LYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKD 344
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKG 465
L + N ++ +L A T L++G
Sbjct: 345 L-VEINASSYAVLLSAFTEFSNLKEG 369
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/575 (31%), Positives = 306/575 (53%), Gaps = 20/575 (3%)
Query: 30 VNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS----PF 85
V+K H+ L ++++ +DI N P + KAC+ + + ++ ++KS F
Sbjct: 2 VSKGLNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDF 61
Query: 86 VKCDRL----------DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
V C+ + A K+FD M ++D SWN ++ G+ Q G+ +F M
Sbjct: 62 VICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYEC 121
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKM 194
GI V + + + L +++H+ + G + ++ V + + Y K D M
Sbjct: 122 GIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLM 181
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
A VF IE ++ VVSW ++V+GC+ ++ +L+ +R M NG R + T++++L +F
Sbjct: 182 ALRVFDQIE--VKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAF 239
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARVLFDGICDRTRVSW 313
G+ +H + +GFDLD +++LI +Y + + + A++ F+ + V W
Sbjct: 240 AELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMW 299
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
+++I Y + D EAL+LF M A G P+ VT+L++I+ C +L+ G Y
Sbjct: 300 SSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVK 359
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
GL + + NALI+MYSKCG + + ++F + K VSW+T+I L+G EAL L
Sbjct: 360 CGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCL 419
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADL 493
FH++ + P+ +TFLAVL AC H+G +++G I D +S E HY+C+ DL
Sbjct: 420 FHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVE--HYACLVDL 477
Query: 494 LGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPY 553
LG+ GK+ +A D +++MP+K IW +L+ ACKIH +EI E +A L K EP +AA +
Sbjct: 478 LGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANH 537
Query: 554 VEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
++ YA G W V ++R +M+ + K G S
Sbjct: 538 TLLSMIYAESGNWFAVEDVRRLMRVQGLSKCYGFS 572
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 208/438 (47%), Gaps = 22/438 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WN I + ++F++M + I P + C +L D+ + IH
Sbjct: 94 SWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRAIHALV 153
Query: 78 ---GHIVKSPFVKCDRLD---------CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
G I K FV +D A ++FD++ V++V SW A++ G +
Sbjct: 154 LIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMA 213
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L F M++ G++ + VT++ + A K +H + G D D ++ I
Sbjct: 214 LDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHI 273
Query: 186 YAKC-DDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLD 243
Y + + L++A+L F ++ VV W+S++ C D ++L +R M +G +
Sbjct: 274 YCRSREGLQLAKLTF--ERSNVKDVVMWSSIIGSYCRSADSI-EALKLFRWMRADGTEPN 330
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+++++++ +L G H + + G + D + N LI+MYSKCG + ++ +F
Sbjct: 331 SVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFK 390
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ + VSW+ +I+ Y G EAL LF M+ G PD +T L+++S C SG ++
Sbjct: 391 EMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKE 450
Query: 364 GKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
G+ FDN G + V L+D+ K G + DA ++ A+P K + W+++++ C
Sbjct: 451 GQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSAC 510
Query: 422 ALNGEFVEALDLFHQLME 439
++G A L +L++
Sbjct: 511 KIHGRLEIAERLAQELIK 528
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 277/520 (53%), Gaps = 12/520 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAA 151
AY +F DV +WN+ML F L+ + M R + F T L +
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRF-TFPSLLKGC 89
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTV 209
+ K +H + + +D+ + T ++ YA C DLK A +F ER+ R
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF----ERMGHRNK 145
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V W SM++G +++L Y+ M +GF D T+ +L+S+ + L G +HSH
Sbjct: 146 VVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSH 205
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ + + L++MY+KCGD+ +AR +FD + D+ +W+A+I GY + EA
Sbjct: 206 IREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEA 265
Query: 330 LRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
L+LF + + P+ VT+L++IS C Q G LE G+W +Y +V + N+LID
Sbjct: 266 LQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLID 325
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
M+SKCG I A+ +F ++ K ++SW +M+ G AL+G EAL F + DL+P+ +T
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEIT 385
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
F+ VL AC+H G +++G + G+ E HY CM DLL R G L EA +F++
Sbjct: 386 FIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSE--HYGCMVDLLCRAGLLAEAREFIR 443
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
MP++ D IWG++L AC+++ N+E+GE A L KLEP + Y+ ++N YA W+
Sbjct: 444 VMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNE 503
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
V +R +M ++K PG S I+ +F A D H E
Sbjct: 504 VKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPE 543
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 209/431 (48%), Gaps = 32/431 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYS 73
R + WNS +R VN N + L + +M + P+ TFP + K CA L +
Sbjct: 39 RELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVG 98
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+++HG +VK + + C L A +F+ M R+ W +M+ G+ +
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKN 158
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
L L+ M G D VT+ L A K L + +HS HI + D+ +C
Sbjct: 159 HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS---HIR-EMDMKIC 214
Query: 180 ----NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ ++ YAKC DLK A VF + + + V +W++++ G ++ ++L +R +
Sbjct: 215 AVLGSALVNMYAKCGDLKTARQVFDKLSD--KDVYAWSALIFGYVKNNRSTEALQLFREV 272
Query: 236 M-YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ R + T+++++S+ L GR VH + VS+ N+LI M+SKCGD
Sbjct: 273 AGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGD 332
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
ID+A+ +FD + + +SW +M++G+A G EAL F M+ PD +T + +++
Sbjct: 333 IDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTA 392
Query: 355 CGQSGALELGK--WFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKI 410
C +G ++ GK +++ A G LK C ++D+ + G + +ARE +P +
Sbjct: 393 CSHAGLVQEGKKLFYEIEALYGVRLKSEHYGC--MVDLLCRAGLLAEAREFIRVMPLQPD 450
Query: 411 VVSWTTMIAGC 421
W +M+ C
Sbjct: 451 GAIWGSMLGAC 461
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 318/638 (49%), Gaps = 39/638 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + L L+++M D++PN + + + ACA + L + IH I
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRIS 148
Query: 82 KSP---------------FVKCDRLDCAYKIFDEMA-VRDVASWNAMLVGFAQMGFLENV 125
+ + KC L+ A ++F+ M+ R V+SWNAM+ +AQ G E
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+RL+ +M ++ T + A + L + +H+ G + D+S+ N ++
Sbjct: 209 IRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTM 265
Query: 186 YAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YA+C L A +F +RL R VVSW++M+A D FD+++ FY M G R +
Sbjct: 266 YARCKCLDDAAKIF----QRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPN 321
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T S+L + L GR VH + G+ + + L+ +Y+ G +D AR LFD
Sbjct: 322 YYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFD 381
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS-MISGCGQSGALE 362
I +R WT +I GY+++G L L+ M+ ++P + S +IS C GA
Sbjct: 382 QIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFA 441
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
+ + + G+ + ++ +L++MYS+ G++ AR++F + + ++WTT+IAG A
Sbjct: 442 DARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYA 501
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI-IQYDDKGISYN 481
+GE AL L+ ++ P+ +TF+ VL AC+H G E+G + I IQ D + +
Sbjct: 502 KHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSD---YAMH 558
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P + HYSC+ DLL R G+L +A + + +MP++ + W +LL A +IH +++ + A
Sbjct: 559 PNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQ 618
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ KL+P A YV ++N +A+ G G+A++R M VKK G S + + F
Sbjct: 619 ITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNV 678
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
D H + + L L+ +E Y +PE E
Sbjct: 679 GDNSHPRFQEIFAELQRLSPKIKEAGY------VPESE 710
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 237/492 (48%), Gaps = 22/492 (4%)
Query: 66 KLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++S + + G+ + + KC + A FD +A ++ SW +ML +AQ G
Sbjct: 49 RISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAA 108
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS-FGIHIGVDADVSVCNTWIS 184
L L+ M L + TV+G A+I A L K++HS G+ DV + N+ ++
Sbjct: 109 LDLYKRMDLQPNPVVYTTVLGAC-ASIEA--LEEGKAIHSRISGTKGLKLDVILENSLLT 165
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC L+ A+ +F + R R+V SWN+M+A F++++ Y M V
Sbjct: 166 MYAKCGSLEDAKRLFERMSGR-RSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSV 221
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T S+LS+ L QGR +H+ G +LD+S+ N L++MY++C +D A +F
Sbjct: 222 RTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQR 281
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R VSW+AMI+ +A+ DEA+ + M+ G P+ T S++ C G L G
Sbjct: 282 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 341
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ + G K ++ AL+D+Y+ GS+ +AR LF + + WT +I G +
Sbjct: 342 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 401
Query: 425 GEFVEALDLFHQLMELDLRP-NRVTFLAVLQACTHTG-FLEKGWAISIIQYDDKGISYNP 482
G L+L+ ++ P ++ + V+ AC G F + A S I+ D G+ +
Sbjct: 402 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEAD--GMISDF 459
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY-VAYC 541
L + + ++ R G L+ A M + D W TL+ H GE+ +A
Sbjct: 460 VL--ATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKH-----GEHGLALG 511
Query: 542 LFK-LEPHSAAP 552
L+K +E A P
Sbjct: 512 LYKEMELEGAEP 523
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/613 (28%), Positives = 305/613 (49%), Gaps = 21/613 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLL--LFRQMKQNDIEPNNLTFPFIAKACAKL 67
+RI+ I+ WN I + + + LF++M+ ++I PN TF I A + L
Sbjct: 66 FDRIHNKDVIS-WNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNL 124
Query: 68 SDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
S + + Q H +K + + K L A ++FD M R+ +W M+
Sbjct: 125 SSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMI 184
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G+A +F MR + + A + + K +H + G+
Sbjct: 185 SGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLL 244
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+S+ N ++ YAKC L + VF ++ ++W++M+ G +L +
Sbjct: 245 VFLSILNALVTMYAKCGSLDDSLQVFEMSNDK--NSITWSAMITGYAQSGDSHKALKLFS 302
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M + G T+V +L++ A+ +G+ VH++ + GF+ + ++ L+ MY+K G
Sbjct: 303 RMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSG 362
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+ AR F+ + V WT+MI+GY Q G+ ++AL L+ M+ G LP+ +T+ S++
Sbjct: 363 VTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLK 422
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C A + G+ GL V + +AL MY+KCG++ + +F +PE+ ++S
Sbjct: 423 ACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIIS 482
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W MI+G + NG EAL+LF ++ + D +P+ VTF+ VL AC+H G ++ GW + +
Sbjct: 483 WNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMF 542
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
D+ G+ P+++HY+CM D+L R GKL EA +F++S I +W LL AC+ + N E
Sbjct: 543 DEFGLL--PKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYE 600
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+G Y L +L ++ YV ++ Y GR + V +R+MMK V K PG S +
Sbjct: 601 LGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELK 660
Query: 594 GKTCTFTAEDRYH 606
F D+ H
Sbjct: 661 SNVHVFVVGDQMH 673
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 227/443 (51%), Gaps = 12/443 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN--VLRLFYNMRLVGIQADFV 142
+ KC L A +FD + +DV SWN ++ G++Q G + V+ LF MR I +
Sbjct: 53 YAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAH 112
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T G+ AA + + + H+ I + DV V ++ ++ Y K L A VF +
Sbjct: 113 TFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRM 172
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R V+W +M++G ++ + M ++ S+LS+ PE +
Sbjct: 173 PE--RNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDS 230
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H + G + +S++N L++MY+KCG +D + +F+ D+ ++W+AMI+GYAQ
Sbjct: 231 GKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQ 290
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
GD +AL+LF M AG P T++ +++ C + A+E GK NY G + + +
Sbjct: 291 SGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYI 350
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+DMY+K G DAR+ F L + +V WT+MIAG NGE +AL L+ ++ +
Sbjct: 351 MTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGI 410
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKL 500
PN +T +VL+AC++ ++G Q + I Y L+ S ++ + + G L
Sbjct: 411 LPNELTMASVLKACSNLAAFDQGR-----QIHARTIKYGLGLEVTIGSALSTMYAKCGNL 465
Query: 501 KEALDFVQSMPIKSDAGIWGTLL 523
+E + MP + D W ++
Sbjct: 466 EEGNIVFRRMP-ERDIISWNAMI 487
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 185/377 (49%), Gaps = 15/377 (3%)
Query: 153 HAKHLSLLKSVHSFGIHIGVDAD-VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
H K L +++H+ I + + + + N+ I+ YAKC L A+LVF I + V+S
Sbjct: 19 HQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHN--KDVIS 76
Query: 212 WNSMVAGCTYGDKFDDS--LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
WN ++ G + S + ++ M + + T + ++ ++ G+ H+
Sbjct: 77 WNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAV 136
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I DV V ++L++MY K G + AR +FD + +R V+W MISGYA + EA
Sbjct: 137 AIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEA 196
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+F M E + S++S ++ GK A GL + + NAL+ M
Sbjct: 197 FEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTM 256
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y+KCGS+ D+ ++F +K ++W+ MI G A +G+ +AL LF ++ + P+ T
Sbjct: 257 YAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTL 316
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA---LDF 506
+ VL AC+ +E+G + Y K + + +L + + D+ + G ++A ++
Sbjct: 317 VGVLNACSDACAVEEGKQVH--NYLLK-LGFESQLYIMTALVDMYAKSGVTEDARKGFNY 373
Query: 507 VQSMPIKSDAGIWGTLL 523
+Q + D +W +++
Sbjct: 374 LQ----QPDLVLWTSMI 386
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARVLFDGICDRT 309
L F ++L +GR +H+ I + + N+LI+ Y+KC + A+++FD I ++
Sbjct: 14 LVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKD 73
Query: 310 RVSWTAMISGYAQKGDLDEA--LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+SW +I+GY+Q+G + + LF M A LP+ T + + ++ G+
Sbjct: 74 VISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQA 133
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A +V V ++L++MY K G + +ARE+F +PE+ V+W TMI+G A+
Sbjct: 134 HAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLA 193
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
EA ++F + + N F +VL A F++ G I
Sbjct: 194 GEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQI 234
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/564 (30%), Positives = 284/564 (50%), Gaps = 34/564 (6%)
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++F+ + +W +++ + G L F M G+ D + ++
Sbjct: 61 RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM-------AELVFCGIEERLRT 208
L+L +S+H + I +G+D D+ N ++ Y+K L+ A VF + ER R+
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180
Query: 209 V-----------------------VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
V VSWN+++AG ++++L R M + D
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSF 240
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DSARVLFDG 304
T+ S+L + +G+ +H I G D D+ V ++LI MY+KC + DS RV F
Sbjct: 241 TLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRV-FTL 299
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +R +SW ++I+G Q G DE LR F M A P + S++ C L LG
Sbjct: 300 LTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 359
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K Y G +N+ + ++L+DMY+KCG+I A+++F + + +VSWT MI GCAL+
Sbjct: 360 KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALH 419
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G+ +A++LF Q+ ++PN V F+AVL AC+H G +++ W D GI+ P +
Sbjct: 420 GQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIA--PGV 477
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+ ++DLLGR G+L+EA DF+ M I IW TLL AC++H NI++ E VA + +
Sbjct: 478 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILE 537
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
++P++ Y+ +AN Y+ RW A R M+R ++K P S + K F A D
Sbjct: 538 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 597
Query: 605 YHAESELTYPVLDCLALHSREEAY 628
H E ++ L +E Y
Sbjct: 598 SHPCYEKIREAMEVLVELMEKEGY 621
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 217/472 (45%), Gaps = 52/472 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S IR + H++L F M + + P++ FP + K+CA L DL + +HG+I+
Sbjct: 74 WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYII 133
Query: 82 KSPF----------------------------------------------VKCDRLDCAY 95
+ V D
Sbjct: 134 RVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVR 193
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
KIF+ M +D+ SWN ++ G A+ G E LR+ M ++ D T+ +
Sbjct: 194 KIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENV 253
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+S K +H I G+DAD+ V ++ I YAKC + + VF + E R +SWNS+
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTE--RDGISWNSI 311
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+AGC FD+ L F+R M+ + + S++ + L G+ +H + GF
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D ++ + ++L+ MY+KCG+I +A+ +FD + R VSWTAMI G A G +A+ LF
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431
Query: 336 MEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
ME G P+ V +++++ C G + E K+F++ G+ V A+ D+ + G
Sbjct: 432 METEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAG 491
Query: 395 SIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
+ +A + + S W T+++ C ++ A + ++++E+D PN
Sbjct: 492 RLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVD--PN 541
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 286/560 (51%), Gaps = 15/560 (2%)
Query: 69 DLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
DL S+++ + F RL C ++ + W++++ F+ L L
Sbjct: 36 DLFLSRLLRRCTAATQFRYARRLLC------QIQTPSIQLWDSLVGHFSGRVTLNRRLSF 89
Query: 129 --FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ MR G+ T L +A + + + H+ + G D+D+ V N+ IS Y
Sbjct: 90 LSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQ-FHAHILKFGFDSDLFVRNSLISGY 148
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ C + VF G E++ VVSW +M+ G D +++ ++ M +G + T
Sbjct: 149 SNCGLFEFGSRVFDGTEDK--DVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMT 206
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
VVS+L + E + GR +H + G DV + ++L+ MY KCG D A+ +FD +
Sbjct: 207 VVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEM 266
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R V+WTA+I+GY Q ++ + +F M + P+ T+ S++S C GAL G+
Sbjct: 267 PSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
Y ++ N V LID Y+KCG + +A +F L EK V +WT MI G A +G
Sbjct: 327 RVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHG 386
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ A+DLFH ++ + PN VTF+ VL AC H G +E+G + + + + P+ D
Sbjct: 387 YAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKER--FNLEPKAD 444
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DL GRKG L+EA ++ MP++ +WG L +C IH + E+G+Y A + KL
Sbjct: 445 HYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKL 504
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA-EDR 604
+P + Y +AN Y+ WD VA +R MK QV K PG S + GK F A +D+
Sbjct: 505 QPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKGKLHEFIAFDDK 564
Query: 605 YHAESELTYPVLDCLALHSR 624
ES+ Y LD + + R
Sbjct: 565 KPLESDDLYKTLDNVGVQMR 584
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 251/539 (46%), Gaps = 69/539 (12%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTL--LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
++ +I W+S + + ++ L L +RQM++N + P+ TFP + KA KL D
Sbjct: 63 QTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANP 122
Query: 73 SQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
Q H HI+K S + C + ++FD +DV SW AM+ GF +
Sbjct: 123 FQ-FHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVR 181
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVS 177
+ F M+ G+ A+ +TV+ + +A A+ + +S+H F + G V DV
Sbjct: 182 NDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVF 241
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ ++ + Y KC A+ VF E R VV+W +++AG G F+ + + M+
Sbjct: 242 IGSSLVDMYGKCGCYDDAQKVF--DEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLK 299
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ + T+ S+LS+ AL +GR VH + I +++ +V TLI Y+KCG ++
Sbjct: 300 SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEE 359
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A ++F+ + ++ +WTAMI+G+A G A+ LF M ++ P+ VT + ++S C
Sbjct: 360 AILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAH 419
Query: 358 SGALELGKWF--------------DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
G +E G+ D+YAC ++D++ + G + +A+ L
Sbjct: 420 GGLVEEGRRLFLSMKERFNLEPKADHYAC-------------MVDLFGRKGLLEEAKALI 466
Query: 404 YALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN---RVTFLAVLQACTHT 459
+P E W + C ++ ++ L + + L+P+ R T LA L + +
Sbjct: 467 ERMPMEPTNAVWGALFGSCLIHKDY--ELGKYAASRVIKLQPSHSGRYTLLANLYSES-- 522
Query: 460 GFLEKGW---AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
+ W A Q D+ + +P C + KGKL E + F P++SD
Sbjct: 523 ----QNWDDVARVRKQMKDQQVVKSP-----GC--SWIEVKGKLHEFIAFDDKKPLESD 570
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 266/485 (54%), Gaps = 5/485 (1%)
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
++ + QA + +SL ++VH G+ V + CNT + YAKC L A LVF +
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+RTVV+W S++A D+++ + M G D+ T+ ++L + C +L G
Sbjct: 61 --VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ VH++ ++ V N L+ MY+KCG ++ A +F + + +SW MI GY++
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+EAL LF M + PD T+ ++ C +L+ GK + G + V
Sbjct: 179 SLPNEALSLFGDMVLEMK-PDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NAL+DMY KCG AR LF +P K +++WT MIAG ++G A+ F+++ + +
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
P+ V+F+++L AC+H+G L++GW + D+ + P+L+HY+C+ DLL R GKL A
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNV--KPKLEHYACIVDLLARSGKLAMA 355
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALG 563
F++SMPI+ DA IWG LL C+IH ++++ E VA +F+LEP + YV +AN YA
Sbjct: 356 YKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEA 415
Query: 564 GRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHS 623
+W+ V +R + R +KK PG S + K F A + H +++ +L L
Sbjct: 416 EKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKM 475
Query: 624 REEAY 628
+EE Y
Sbjct: 476 KEEGY 480
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 204/410 (49%), Gaps = 21/410 (5%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRD 105
I +ACA D+ + +HG VK+ + KC LD A +FD M+VR
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
V +W +++ +A+ G + +RLF+ M G+ D T+ + A L K VH+
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ + +++ VCN + YAKC ++ A VF +E ++ ++SWN+M+ G +
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVF--LEMPVKDIISWNTMIGGYSKNSLP 181
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
+++L+ + M+ + D TT+ +L + +L +G+ VH H + GF D V N L
Sbjct: 182 NEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+ MY KCG AR+LFD I + ++WT MI+GY G + A+ F M AG PD
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300
Query: 346 VTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
V+ +S++ C SG L+ G ++F+ +K + ++D+ ++ G + A +
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360
Query: 405 ALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
++P E W +++GC ++ + A + + EL+ P + +L
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELE--PENTGYYVLL 408
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ W S I + + + + LF +M + + P+ T + ACA L + +H
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+I ++ + KC ++ A +F EM V+D+ SWN M+ G+++
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L LF +M ++ ++ D T+ + A L K VH + G +D V N +
Sbjct: 183 EALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y KC +A L+F I + +++W M+AG ++++ + M G D
Sbjct: 242 DMYVKCGVPVLARLLFDMIPT--KDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299
Query: 244 VTTVVSLL 251
+ +S+L
Sbjct: 300 EVSFISIL 307
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ I + ++ L LF M +++P+ T I ACA L+ L + +HG
Sbjct: 165 IISWNTMIGGYSKNSLPNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHG 223
Query: 79 HIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
HI+++ F VKC A +FD + +D+ +W M+ G+ GF N
Sbjct: 224 HILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNN 283
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ F MR GI+ D V+ + + A H+
Sbjct: 284 AITTFNEMRQAGIEPDEVSFISILYACSHS 313
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 190/625 (30%), Positives = 308/625 (49%), Gaps = 28/625 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + V + LF +M+ + PN TF + A A + + +H V
Sbjct: 169 WTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSV 228
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + KC ++ A +F +M RD+ SWN ++ G L+
Sbjct: 229 KFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQ 288
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF++ R + T + + + K L+L + +HS + G +D +V + +Y+
Sbjct: 289 LFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYS 348
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +L A +F + + VVSW +M+ GC + + M + + + T
Sbjct: 349 KCGELDDAFNIFL-LMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTY 407
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++L++ + P L Q +H+ I + SV L++ YSK G+ + A +F I
Sbjct: 408 STVLTASI-PILLPQ---IHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDH 463
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA-LELGKW 366
+ V+W+AM+S Y+Q GD D A +F M G P+ T+ S I C A ++ G+
Sbjct: 464 KDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQ 523
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
F + +D + V +AL+ MY++ GSI AR +F ++ +VSW +MI+G A +G
Sbjct: 524 FHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGY 583
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI---SYNPE 483
EALD F Q+ + + + TFLAV+ CTH G +++G QY D + + +P
Sbjct: 584 SKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQ-----QYFDSMVMDHNISPT 638
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HYSCM DL R GKL E ++ ++ MP + A +W TLL AC++H N+E+G+ A L
Sbjct: 639 MEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLL 698
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
LEP +A YV ++N YA GRW +R +M +VKK G S I K +F A D
Sbjct: 699 LLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACD 758
Query: 604 RYHAESELTYPVLDCLALHSREEAY 628
+ H SE Y L + ++E Y
Sbjct: 759 KSHPLSEQIYAKLKAMTTRLKQEGY 783
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 254/569 (44%), Gaps = 68/569 (11%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPF---------------VKCDRLDCAYKIFDEMAVR 104
+ K C + D + + +H VK F +KC ++ +F+ M R
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+V +W ++L G+ Q +V+ LF+ MR G+ + T + A + L + VH
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ + G + V VCN+ I+ Y+KC ++ A+ VF +E R +VSWN+++AG +
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMET--RDMVSWNTLMAGLLLNEH 282
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
++L + + +L +T +++ + L R +HS + +GF D +V+
Sbjct: 283 QLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTA 342
Query: 285 LISMYSKCGDIDSARVLFDGIC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
++ YSKCG++D A +F + + VSWTAMI G Q D+ A LF M P
Sbjct: 343 IMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKP 402
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM----VCNALIDMYSKCGSIGDA 399
+ T ++++ S + L + +K N V AL+ YSK G+ +A
Sbjct: 403 NEFTYSTVLTA---SIPILLPQIHAQI-----IKTNYQHAPSVGTALLASYSKLGNTEEA 454
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC-TH 458
+F + K VV+W+ M++ + G+ A ++F ++ ++PN T + + AC +
Sbjct: 455 LSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASP 514
Query: 459 TGFLEKGW---AISI---------------IQYDDKG------ISYNPELDH----YSCM 490
T +++G AISI Y KG I + + D ++ M
Sbjct: 515 TAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSM 574
Query: 491 ADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+ G KEALD + M I+ D + ++ C H + + E Y +
Sbjct: 575 ISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGC-THAGL-VKEGQQYFDSMVMD 632
Query: 548 HSAAPYVE----MANKYALGGRWDGVANI 572
H+ +P +E M + Y+ G+ D N+
Sbjct: 633 HNISPTMEHYSCMVDLYSRAGKLDETMNL 661
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 135/311 (43%), Gaps = 32/311 (10%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK-LSDLIYSQ 74
S + W + I + + LF +M++++++PN T+ + A L I++Q
Sbjct: 366 SQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQ 425
Query: 75 MIHGHIVKSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+I + +P V K + A IF + +DV +W+AML ++Q G +
Sbjct: 426 IIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGA 485
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+F M + G++ + T+ A A + + H+ I + V + ++
Sbjct: 486 TNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVT 545
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YA+ + A +VF + R +VSWNSM++G ++L+ +R M G +D
Sbjct: 546 MYARKGSIDSARIVF--ERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDG 603
Query: 245 TTVVSLLSSFVCPEALVQGR-----LVHSHGI-----HYGFDLDVSVINTLISMYSKCGD 294
T ++++ + +G+ +V H I HY + ++ +YS+ G
Sbjct: 604 ATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHY---------SCMVDLYSRAGK 654
Query: 295 IDSARVLFDGI 305
+D L +G+
Sbjct: 655 LDETMNLIEGM 665
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 301/604 (49%), Gaps = 22/604 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR + E+HK + LF MK + ++ TF + CA DL H I+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC L+ A +IF+ M RD SWN ++ G+ Q
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFD 515
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M GI +D + +A + L K VH + G+D + ++ I Y+
Sbjct: 516 LFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYS 575
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A VF + E +VVS N+++AG + + ++++ ++ M+ G T
Sbjct: 576 KCGIIEDARKVFSSMPEW--SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTKGVNPSEITF 632
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFDGIC 306
+++ + PE+L G H I +GF + + +L+ +Y + A LF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELS 692
Query: 307 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ V WT M+SG++Q G +EAL+ + M G LPD T ++++ C +L G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGR 752
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALN 424
+ + + N LIDMY+KCG + + ++F + + VVSW ++I G A N
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G +AL +F + + + P+ +TFL VL AC+H G + G I + GI +
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI--EARV 870
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
DH +CM DLLGR G L+EA DF+++ +K DA +W +LL AC+IH + GE A L +
Sbjct: 871 DHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIE 930
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP +++ YV ++N YA GRW+ +R M+ VKK PG S + + F A D+
Sbjct: 931 LEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQ 990
Query: 605 YHAE 608
H++
Sbjct: 991 SHSD 994
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 210/435 (48%), Gaps = 24/435 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W V + +++F +M+ P++L F V
Sbjct: 229 WTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFV---------------------TV 267
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
+ ++ +L A +F EM DV +WN M+ G + G + F NMR +++
Sbjct: 268 INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTR 327
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T+ + A +L L VH+ I +G+ +++ V ++ +S Y+KC+ ++ A VF
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+EER V WN+M+ G + + + + M +G+ +D T SLLS+ L
Sbjct: 388 LEER--NDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLE 445
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G HS I ++ V N L+ MY+KCG ++ AR +F+ +CDR VSW +I GY
Sbjct: 446 MGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYV 505
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q + EA LF M + G + D + S + C L GK + GL +
Sbjct: 506 QDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLH 565
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
++LIDMYSKCG I DAR++F ++PE VVS +IAG + N EA+ LF +++
Sbjct: 566 TGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKG 624
Query: 442 LRPNRVTFLAVLQAC 456
+ P+ +TF +++AC
Sbjct: 625 VNPSEITFATIVEAC 639
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 240/509 (47%), Gaps = 58/509 (11%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WNS + + + K L F + +N I PN TF + A+ +++ + + IH
Sbjct: 125 VTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHC 184
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
++K + KCDRL A ++FD + + W + G+ + G E
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ +F MR G + D HL+ V+V NT+IS
Sbjct: 245 AVIVFERMRGEGHRPD---------------HLAF----------------VTVINTYIS 273
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD--SLNFYRHMMYNGFRL 242
LK A L+F E VV+WN M++G +G + + ++ ++ +M + +
Sbjct: 274 ----LGKLKDARLLFG--EMPSPDVVAWNVMISG--HGKRGCEIVAIEYFLNMRKSSVKS 325
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+T+ S+LS+ L G +VH+ I G ++ V ++L+SMYSKC +++A +F
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ + +R V W AMI GYA G+ + + LF M+++G D T S++S C S LE
Sbjct: 386 EALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLE 445
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
+G F + L N+ V NAL+DMY+KCG++ DAR++F + ++ VSW T+I G
Sbjct: 446 MGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYV 505
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ EA DLF ++ + + + L+ACT+ L +G + + +
Sbjct: 506 QDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVK---CGLDR 562
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMP 511
L S + D+ + G +++A SMP
Sbjct: 563 VLHTGSSLIDMYSKCGIIEDARKVFSSMP 591
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 241/524 (45%), Gaps = 22/524 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + WN I + + F M+++ ++ T + A +++L +
Sbjct: 289 SPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H +K S + KC++++ A K+F+ + R+ WNAM+ G+A G
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGE 408
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
V+ LF +M+ G D T L + L + HS I + ++ V N
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNA 468
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ YAKC L+ A +F + + R VSWN+++ G + ++ + + M G
Sbjct: 469 LVDMYAKCGALEDARQIFEHMCD--RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIV 526
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D + S L + L QG+ VH + G D + ++LI MYSKCG I+ AR +
Sbjct: 527 SDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKV 586
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + + + VS A+I+GY+Q +L+EA+ LF M G P +T +++ C + +L
Sbjct: 587 FSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESL 645
Query: 362 ELGKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIA 419
LG F G + + +L+ +Y + +A LF L K +V WT M++
Sbjct: 646 TLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMS 705
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G + NG + EAL + ++ P++ TF+ VL+ C+ L +G AI + + ++
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFH---LA 762
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
++ + + + D+ + G +K + M +S+ W +L+
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLI 806
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/504 (25%), Positives = 216/504 (42%), Gaps = 53/504 (10%)
Query: 31 NKNEAHKTLL--------LFRQMKQNDIEPNNLTFPF-IAKACAKLSDL--IYSQMIHGH 79
N ++ H+ LL LF+ K D P+ L I KA S + I S+ G+
Sbjct: 40 NHDQIHQGLLEICLEQCKLFKSRKVFDEMPHRLALALRIGKAVHSKSLILGIDSEGRLGN 99
Query: 80 IVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
+ + KC ++ A K F+ + +DV +WN+ML ++ +G VLR F ++ I
Sbjct: 100 AIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFP 158
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
+ T + + ++ + +H I +G++ + + YAKCD L A+ VF
Sbjct: 159 NKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVF 218
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
GI + V W + +G ++++ + M G R D
Sbjct: 219 DGIVD--PNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPD---------------- 260
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
H F V+VINT IS+ G + AR+LF + V+W MISG
Sbjct: 261 ------------HLAF---VTVINTYISL----GKLKDARLLFGEMPSPDVVAWNVMISG 301
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+ ++G A+ F M + T+ S++S G L+LG A GL N
Sbjct: 302 HGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V ++L+ MYSKC + A ++F AL E+ V W MI G A NGE + ++LF +
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+ TF ++L C + LE G I K L + + D+ + G
Sbjct: 422 SGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKK---LTKNLFVGNALVDMYAKCGA 478
Query: 500 LKEALDFVQSMPIKSDAGIWGTLL 523
L++A + M + + W T++
Sbjct: 479 LEDARQIFEHMCDRDNVS-WNTII 501
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL G+ VHS + G D + + N ++ +Y+KC + A F+ + ++ +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y+ G + LR F ++ P+ T ++S + +E G+ GL+
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
N AL+DMY+KC +GDA+ +F + + V WT + +G G EA+ +F ++
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
RP+ + F+ V+ G L+ + G +P++ ++ M G++G
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLF-------GEMPSPDVVAWNVMISGHGKRG 306
Query: 499 KLKEALDFVQSM---PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
A+++ +M +KS G++L A I N+++G V KL
Sbjct: 307 CEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/592 (29%), Positives = 298/592 (50%), Gaps = 26/592 (4%)
Query: 19 INQWNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WN+ + A+N+ LL ++P+++T I CA+L L + +H
Sbjct: 242 IVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVH 301
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G ++ + KC + A +F + RD+ SWNAM+ G++Q G
Sbjct: 302 GLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSR 361
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LF + Q T++ + + ++ L +S+H + + +G + N+ +
Sbjct: 362 EAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLM 421
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRL 242
Y C DL +A +V WN+++AGCT F ++L + M +
Sbjct: 422 LMYINCGDL-VACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCH 480
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + +++S+ E L G +H + + D+ V N LI+MY +CG+I++AR++F
Sbjct: 481 DSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIF 540
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
C+R SW MIS ++Q D AL LF +E P+ +T++ ++S C Q G L
Sbjct: 541 GFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFE---PNEITIVGILSACTQLGVLR 597
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
GK + L+ N V AL DMYS CG + A ++F + PE+ V +W +MI+
Sbjct: 598 HGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFG 657
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ +A++LFH++ E RP + TF+++L AC+H+G + +G + Y + +N
Sbjct: 658 FHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEG----LWYYSNMLELFNV 713
Query: 483 ELD--HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
E D H+ CM D+LGR G+L EA +F++ MP + + G+WG LL AC H ++++G VA
Sbjct: 714 EADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAE 773
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
LF+LEP + Y+ ++N Y GRW +R +++ +KK SL +
Sbjct: 774 LLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPAAYSLIDV 825
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 228/448 (50%), Gaps = 10/448 (2%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ + + ++ +FDE+ RDV WNAM+ + + LF + G+ D
Sbjct: 15 TAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVGLDST 74
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T++ + A+ H +L+ + +H G+ +D +CN I YAKC +L +E VF G+
Sbjct: 75 TLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGM 134
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R ++SWNSM+ GC Y + SL +++ M Y+ + D ++ +S+ L
Sbjct: 135 E--YRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSF 192
Query: 263 GRLVHSHGIHYGFDLDV---SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
G+++H GI G+ D+ S N+LIS+YS+C DI +A +LF + + VSW AM+ G
Sbjct: 193 GQVIHGWGIKLGYK-DISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDG 251
Query: 320 YAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
A + EA L M+ G + PD VTV+ +I C + L G+ +
Sbjct: 252 LALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGL 311
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ V N+LIDMYSKC + A +F A+PE+ +VSW MI+G + NG EA LF QL+
Sbjct: 312 DFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLL 371
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ + + T LA+L +C + FL+ G +I Q G + NP L S M + G
Sbjct: 372 QSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQL-KLGFANNP-LAVNSLMLMYI-NCG 428
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCAC 526
L +Q++ +D W T++ C
Sbjct: 429 DLVACFSLLQTVSAAADIVCWNTVMAGC 456
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 226/474 (47%), Gaps = 27/474 (5%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+YR + WN+ I +V + LF ++ + ++ T + A + + +L
Sbjct: 34 LYRDVIL--WNAMITASVENQCFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQ 91
Query: 73 SQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+++HG K+ + KC L + +F M RD+ SWN+M+ G A
Sbjct: 92 GRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRGCAY 151
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD--ADV 176
+ + L F M QAD V++ A+ LS + +H +GI +G +
Sbjct: 152 NNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHN 211
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
S N+ IS Y++C D++ AE++F E + + +VSWN+M+ G + ++ + M
Sbjct: 212 SFENSLISLYSQCRDIQAAEILF--KEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQ 269
Query: 237 YNG-FRLDVTTVVSLLSSFVCPEALV--QGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
G + D TVV ++ +C E ++ +GR VH + LD SV N+LI MYSKC
Sbjct: 270 LLGCVQPDSVTVVIIIP--LCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCK 327
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
D+ A +F I +R VSW AMISGY+Q G EA LF + + L T+L+++
Sbjct: 328 DVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILP 387
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VV 412
C S L+ G+ + G +N + N+L+ MY CG + L + +V
Sbjct: 388 SCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIV 447
Query: 413 SWTTMIAGCALNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKG 465
W T++AGC NG F EAL F+ + + D+ + V V+ AC + L G
Sbjct: 448 CWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAG 501
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 9/331 (2%)
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
+G A + + +++Y++ D + +F E R V+ WN+M+ F ++
Sbjct: 1 MGALAHLPTSTSLLTAYSRAADFSSSWALF--DEILYRDVILWNAMITASVENQCFGVAV 58
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
N + +M G LD TT++ ++S+ L QGR++H G D + N LI MY
Sbjct: 59 NLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMY 118
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+KCG++ S+ +F G+ R +SW +M+ G A ++L F M + E D V++
Sbjct: 119 AKCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLT 178
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKD--NVMVCNALIDMYSKCGSIGDARELFYALP 407
+S G L G+ + G KD + N+LI +YS+C I A LF +
Sbjct: 179 CAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMK 238
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGW 466
K +VSW M+ G ALN EA DL H++ L ++P+ VT + ++ C L +G
Sbjct: 239 YKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGR 298
Query: 467 AI-SIIQYDDKGISY---NPELDHYSCMADL 493
A+ + + G+ + N +D YS D+
Sbjct: 299 AVHGLTLRREMGLDFSVTNSLIDMYSKCKDV 329
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/601 (32%), Positives = 310/601 (51%), Gaps = 93/601 (15%)
Query: 41 LFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG-----HIVKSP----FVKCDR 90
LF+ M + +I+PN + + K+ S L + ++ H V++ + K
Sbjct: 90 LFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGP 149
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
++ A K+FDEM R VA WN M+ G+ + G E LF+ VMG +
Sbjct: 150 IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH-------------VMGDQE- 195
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ +V T I+ +AK +LK A + F + ER +VV
Sbjct: 196 ---------------------ISRNVITWTTMITGHAKKGNLKTARMYFDKMPER--SVV 232
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSS---------------- 253
SWN+M++G G ++++ + M+ G + D TT V+++SS
Sbjct: 233 SWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRK 292
Query: 254 ----------FVCPEALVQ-----GRLVHSHGIH-----YGFDLDVSVINTLISMYSKCG 293
+ AL+ G L +H I Y + V N +IS Y++ G
Sbjct: 293 LDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVP-WNAMISAYARVG 351
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMI 352
D+ SAR LFD + R VSW +MI+GY Q G+ +A++LF M + PD VT++S+
Sbjct: 352 DLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVF 411
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S CG G L LG W + ++ ++ V N+LI MYS+CGS+ DA +F + + +V
Sbjct: 412 SACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLV 471
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
S+ T+I+G A +G +E+++L ++ E + P+R+T++A+L AC+H G L +G Q
Sbjct: 472 SYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEG------Q 525
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
+ I + P++DHY+CM D+LGR G+L+EA+ +QSMP++ AGI+G+LL A IH +
Sbjct: 526 RLFESIKF-PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQV 584
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
E+GE A LFK+EPH++ YV ++N YA GRW +R M++ VKK G S
Sbjct: 585 ELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLEH 644
Query: 593 N 593
N
Sbjct: 645 N 645
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 230/515 (44%), Gaps = 109/515 (21%)
Query: 71 IYSQMIH------GHIVKSPFVKCDRL--DCAYK--IFDEMAVRDVASWNAMLVGFAQMG 120
+++Q++H H V +C RL +Y IF DV + ML ++Q+G
Sbjct: 22 LHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVRVFTFMLKYYSQIG 81
Query: 121 FLENV-LRLFYNM-RLVGIQAD--FVTVMGLTQAAIHAKHLS-LLKSVHSFGIHIGVDAD 175
V + LF +M R I+ + F +VM + + L+ +LKS G D D
Sbjct: 82 VRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAHVLKS--------GYDRD 133
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V N + YAK ++ A +F + +R TV WN M++G
Sbjct: 134 HYVRNGILGIYAKYGPIEFARKLFDEMPDR--TVADWNVMISGY---------------- 175
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ C L H G +V T+I+ ++K G++
Sbjct: 176 ------------------WKCGNEEEASTLFHVMGDQ-EISRNVITWTTMITGHAKKGNL 216
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISG 354
+AR+ FD + +R+ VSW AM+SGYAQ G +E +RLF M + G + PD T +++IS
Sbjct: 217 KTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISS 276
Query: 355 CGQSG----ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS--------------- 395
C G + + + D+ G + N V AL+DM++KCG+
Sbjct: 277 CSSLGDPCLSESIVRKLDDTV---GFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYK 333
Query: 396 ----------------IGD---ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+GD AR LF +P++ VSW +MIAG NGE V+A+ LF +
Sbjct: 334 YRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEE 393
Query: 437 LMEL-DLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLL 494
++ D +P+ VT ++V AC H G L G WA+SI++ + IS + Y+ + +
Sbjct: 394 MISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQIS----ISVYNSLISMY 449
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
R G +++A+ Q M + D + TL+ H
Sbjct: 450 SRCGSMQDAVLIFQEMATR-DLVSYNTLISGFAEH 483
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 190/437 (43%), Gaps = 84/437 (19%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN I + LF M +I N +T ++ MI
Sbjct: 164 TVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVIT---------------WTTMIT 208
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG- 136
GH K L A FD+M R V SWNAML G+AQ G E +RLF +M G
Sbjct: 209 GH------AKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN 262
Query: 137 IQAD---FVTVMG---------LTQAAI----------------------HAKHLSLLKS 162
+Q D +VTV+ L+++ + HAK L++
Sbjct: 263 VQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAK-CGNLEA 321
Query: 163 VHSFGIHIGVDADVSVC--NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
H +GV S N IS+YA+ DL A +F + +R VSWNSM+AG T
Sbjct: 322 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQR--DTVSWNSMIAGYT 379
Query: 221 YGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ ++ + M+ + + D T+VS+ S+ L G S + +
Sbjct: 380 QNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISI 439
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
SV N+LISMYS+CG + A ++F + R VS+ +ISG+A+ G E++ L M+
Sbjct: 440 SVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKED 499
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWF---------DNYACSGGLKDNVMVCNALIDMY 390
G PD +T +++++ C +G L G+ D+YAC +IDM
Sbjct: 500 GIEPDRITYIAILTACSHAGLLGEGQRLFESIKFPDVDHYAC-------------MIDML 546
Query: 391 SKCGSIGDARELFYALP 407
+ G + +A +L ++P
Sbjct: 547 GRAGRLEEAMKLIQSMP 563
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 314/602 (52%), Gaps = 94/602 (15%)
Query: 41 LFRQMKQN-DIEPNNLTFPFIAKACAKLSDLIYSQMIHG-----HIVKSP----FVKCDR 90
LF+ M Q+ DI+PN + + K+ S L + ++ H V++ + K
Sbjct: 18 LFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGP 77
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
++ A K+FDEM R VA WN M+ G+ + G E LF+ VMG +
Sbjct: 78 IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH-------------VMGDQE- 123
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ +V T I+ +AK +LK A + F + ER +VV
Sbjct: 124 ---------------------ISRNVITWTTMITGHAKKGNLKTARMYFDKMPER--SVV 160
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTT---VVSLLSSFVCP---EALVQ- 262
SWN+M++G G ++++ + M+ G + D TT V+S SS P E++V+
Sbjct: 161 SWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRK 220
Query: 263 ------------------------GRLVHSHGIH-----YGFDLDVSVINTLISMYSKCG 293
G L +H I Y + V N +IS Y++ G
Sbjct: 221 LDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVP-WNAMISAYARVG 279
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA--GELPDLVTVLSM 351
D+ SA+ LFD + R VSW +MI+GY Q G+ +A++LF M ++ PD VT++S+
Sbjct: 280 DLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSV 339
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
S CG G L LG W + ++ ++ V N+LI+MYS+CGS+ DA +F + + +
Sbjct: 340 FSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDL 399
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
VS+ T+I+G A +G +E+++L ++ E + P+R+T++A+L AC+H G L++G
Sbjct: 400 VSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEG------ 453
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
Q + I + P++DHY+CM D+LGR G+L+EA+ +QSMP++ AGI+G+LL A IH
Sbjct: 454 QRLFESIKF-PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQ 512
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+E+GE A LFK+EPH++ Y ++N YA GRW +R M++ VKK G S
Sbjct: 513 VELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 572
Query: 592 IN 593
N
Sbjct: 573 HN 574
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 191/438 (43%), Gaps = 85/438 (19%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN I + LF M +I N +T ++ MI
Sbjct: 92 TVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVIT---------------WTTMIT 136
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG- 136
GH K L A FD+M R V SWNAML G+AQ G E +RLF +M G
Sbjct: 137 GH------AKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN 190
Query: 137 IQAD---FVTVMG---------LTQAAI----------------------HAKHLSLLKS 162
+Q D + TV+ L+++ + HAK L++
Sbjct: 191 VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAK-CGNLEA 249
Query: 163 VHSFGIHIGVDADVSVC--NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
H +GV S N IS+YA+ DL A+ +F + +R VSWNSM+AG T
Sbjct: 250 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQR--DTVSWNSMIAGYT 307
Query: 221 YGDKFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ ++ + M+ + + D T+VS+ S+ L G S +
Sbjct: 308 QNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQIS 367
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+SV N+LI+MYS+CG + A ++F + R VS+ +ISG+A+ G E++ L M+
Sbjct: 368 ISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKE 427
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWF---------DNYACSGGLKDNVMVCNALIDM 389
G PD +T +++++ C +G L+ G+ D+YAC +IDM
Sbjct: 428 DGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHYAC-------------MIDM 474
Query: 390 YSKCGSIGDARELFYALP 407
+ G + +A +L ++P
Sbjct: 475 LGRAGRLEEAMKLIQSMP 492
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 42/285 (14%)
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
++ ++HM+ + D+ S S + A + L +H + G+D D V N ++ +
Sbjct: 16 VSLFKHMLQH---CDIKPNASFYS-VMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGI 71
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y+K G I+ AR LFD + DRT W MISGY + G+ +EA LF M +++T
Sbjct: 72 YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITW 131
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
+MI+G ++K G++ AR F +PE
Sbjct: 132 TTMITG-----------------------------------HAKKGNLKTARMYFDKMPE 156
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ VVSW M++G A G E + LF+ ++ +++P+ T+ V+ +C+ G + +
Sbjct: 157 RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLG--DPCLS 214
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
SI++ D + + P + + D+ + G L+ A + + +
Sbjct: 215 ESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 259
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 188/633 (29%), Positives = 318/633 (50%), Gaps = 34/633 (5%)
Query: 22 WNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I A N + LLL R+M + PN +F I +C S L ++ IH +
Sbjct: 204 WNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARV 263
Query: 81 VKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ F+ +C +D + +F+ MAVR+ SWNAM+ FAQ G
Sbjct: 264 EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAF 323
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS--VHSFGIHIGVDADVSVCNTWIS 184
+++ M+ G + + +T + +AA + L +S +H + G++ DV V ++
Sbjct: 324 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 383
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD--KFDDSLNFYRHMMYNGFRL 242
Y + A F I + +VSWN+M+ YGD + +++ + M
Sbjct: 384 MYGSTGAIDRARAAFDAIPAK--NIVSWNAMLTA--YGDNGRAREAMELFAAMKRQSL-- 437
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVL 301
VS L+ C E + + R +H+ + G F + S+ N ++ M+++ G ++ A
Sbjct: 438 -APNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAA 496
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + VSW ++ + + DL A+ F+ M+ G PD T++S++ C G L
Sbjct: 497 FDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTL 556
Query: 362 ELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGS-IGDARELFYALPE--KIVVSWTTM 417
ELG+ + ++ +V+V +A+++M +KCGS + + LF +P+ K +V+W TM
Sbjct: 557 ELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTM 616
Query: 418 IAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
IA A +G +AL LF + + +RP+ TF++VL C+H G +E G + +
Sbjct: 617 IAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVL 676
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
GI P ++HY+C+ D+LGR G L+EA DF++ MP+ +D+ +W +LL AC + ++E GE
Sbjct: 677 GIEQQP-VEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGE 735
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK-FPGQSLFHINGK 595
A +L + YV ++N YA GRW+ +R M +VKK PG+S + +
Sbjct: 736 RAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNR 795
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F A DR H +S+ Y L+ L RE Y
Sbjct: 796 VHEFFARDRSHPQSDAIYAELERLKGLIREAGY 828
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 226/514 (43%), Gaps = 43/514 (8%)
Query: 43 RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKC 88
R K +D T + + C +DL + +H IVK + KC
Sbjct: 13 RSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC 72
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVG----------FAQMGFLENVLRLFYNMRLVGIQ 138
LD A F + R +A+WN ++ + +M E + ++ +
Sbjct: 73 RSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVL 132
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ + ++ A ++ + VH ++ D+ V + +Y KC ++ A V
Sbjct: 133 GAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEV 192
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGD-KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F I+ + ++ WN+ + C D + D +L R M G + + V++LSS
Sbjct: 193 FSRIQ--VPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDH 250
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+L R +H+ GF DV V L++MY +CG +D + +F+ + R VSW AMI
Sbjct: 251 SSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMI 310
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK--WFDNYACSGG 375
+ +AQ G A +++ M+ G P+ +T ++ + S + +LG+ + G
Sbjct: 311 AAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAG 370
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
L+ +VMV AL+ MY G+I AR F A+P K +VSW M+ NG EA++LF
Sbjct: 371 LEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFA 430
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD--- 492
+ L PN+V++LAVL C +S + + N S +A+
Sbjct: 431 AMKRQSLAPNKVSYLAVLGCCED---------VSEARSIHAEVVGNGLFAQESSIANGVV 481
Query: 493 -LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ R G L+EA+ + +K D+ W T + A
Sbjct: 482 RMFARSGSLEEAVAAFDATVVK-DSVSWNTKVAA 514
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 21/255 (8%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ I WN+ + + A + + LF MK+ + PN +++ + C +S+ ++
Sbjct: 403 AKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARS 459
Query: 76 IHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH +V + F + L+ A FD V+D SWN + +
Sbjct: 460 IHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSARE 519
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV-HSFGIHIGVDADVSVC 179
L + FY M+ G + D T++ + L L +S+ I V+ DV V
Sbjct: 520 DLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVA 579
Query: 180 NTWISSYAKC-DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY- 237
+ ++ AKC + E +F + + + +V+WN+M+A +L +R M
Sbjct: 580 SAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQR 639
Query: 238 NGFRLDVTTVVSLLS 252
+ R D +T VS+LS
Sbjct: 640 SSVRPDSSTFVSVLS 654
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 185/619 (29%), Positives = 314/619 (50%), Gaps = 25/619 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + TI+ WNS I ++ F M+ E N T + C +
Sbjct: 218 FNEMNERDTIS-WNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDY 276
Query: 70 LIYSQMIHGHIVK----SPFVKCDRLDCAYK----------IFDEMAVRDVASWNAMLVG 115
L + + +HG VK S C+ L Y IF M RD+ SWN+ML
Sbjct: 277 LKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLAC 336
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ Q G L++F M + + ++VT A + + + K +H F + +G+ +
Sbjct: 337 YVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDE 396
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV--VSWNSMVAGCTYGDKFDDSLNFYR 233
+ + NT I+ Y KC + A+ VF +R+ + V+WN+++ G + ++++ ++
Sbjct: 397 LIIGNTLITFYGKCHKMAEAKKVF----QRMPKLDKVTWNALIGGFANNAELNEAVAAFK 452
Query: 234 HMMYNGFR-LDVTTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSK 291
M +D T+V++L S + E L++ G +H+H + GFDLD V ++LI+MY+K
Sbjct: 453 LMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAK 512
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CGD+ S+ +FD + +T W A+I+ A+ G +EAL+L M +AG D +
Sbjct: 513 CGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTA 572
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+S LE G+ G + + + NA +DMY KCG + DA + ++
Sbjct: 573 LSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSR 632
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
+SW T+I+ A +G+F +A + FH +++L ++PN V+F+ +L AC+H G +++G A
Sbjct: 633 LSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYAS 692
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
GI P ++H CM DLLGR G+L EA F+ MPI + +W +LL +C+I+ N
Sbjct: 693 MTSVYGI--QPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRN 750
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+++G A L +L+P + YV +N +A GRW+ V ++R M ++++K P S
Sbjct: 751 LDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVK 810
Query: 592 INGKTCTFTAEDRYHAESE 610
G F D+ H + E
Sbjct: 811 WKGNISIFGMGDQTHPQME 829
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 236/526 (44%), Gaps = 26/526 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + + + + +++M+ I N + +C L D+I + GH +
Sbjct: 128 WTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHAL 187
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F C ++ A IF+EM RD SWN+++ AQ E R
Sbjct: 188 KFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFR 247
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F+ MRLV + ++ T+ L +L K VH + G+++++ +CNT +S Y+
Sbjct: 248 YFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYS 307
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K AEL+F + E R ++SWNSM+A + +L + M++ ++ T
Sbjct: 308 DAGRSKDAELIFRRMPE--RDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTF 365
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L++ + PE G+++H + G ++ + NTLI+ Y KC + A+ +F +
Sbjct: 366 TSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPK 425
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGC-GQSGALELGK 365
+V+W A+I G+A +L+EA+ F M E + D +T+++++ C ++ G
Sbjct: 426 LDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGI 485
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ G + V ++LI MY+KCG + + +F L K W +IA A G
Sbjct: 486 PIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYG 545
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EAL L ++ + ++ F L LE+G Q I ELD
Sbjct: 546 FGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQ-----QLHGSTIKLGFELD 600
Query: 486 HYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
H+ A D+ G+ G+L +AL + P W TL+ H
Sbjct: 601 HFIINAAMDMYGKCGELDDALRILPQ-PTDRSRLSWNTLISISARH 645
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 228/483 (47%), Gaps = 24/483 (4%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K R++ A +FD M+ R+ ASWN M+ G+ ++G + F ++ +GI+ +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 145 MGLTQA----AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
L A +I AK H F I G+ DV V +++ YA + A+ +F
Sbjct: 62 ASLVTACNKSSIMAKEGF---QFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFN 118
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ +R VVSW S++ + + +N Y+ M + G + + ++SS +
Sbjct: 119 EMPDR--NVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDI 176
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+ G + H + +G + VS N+LI M+ CGDI+ A +F+ + +R +SW ++IS
Sbjct: 177 ILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISAN 236
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
AQ +E+ R F M E + T+ ++S CG L+ GK A GL+ N+
Sbjct: 237 AQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNI 296
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+CN L+ +YS G DA +F +PE+ ++SW +M+A +G + AL +F +++ +
Sbjct: 297 CLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWM 356
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWA----ISIIQYDDKGISYNPELDHYSCMADLLGR 496
N VTF + L AC F G + ++ D+ I N + Y G+
Sbjct: 357 KKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFY-------GK 409
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV-AYCLFKLEPHSAAPYVE 555
K+ EA Q MP K D W L+ N E+ E V A+ L + S Y+
Sbjct: 410 CHKMAEAKKVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYIT 466
Query: 556 MAN 558
+ N
Sbjct: 467 IVN 469
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 212/464 (45%), Gaps = 19/464 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
WN + V + +L FR + I+P+ + AC K S +
Sbjct: 26 WNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSSIMAKEGFQFHGFA 85
Query: 71 IYSQMIHGHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
I +I+ V + FV + A K+F+EM R+V SW +++V ++ G + V+
Sbjct: 86 IKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVI 145
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ MR GI + + + + + L + + G++ VS N+ I +
Sbjct: 146 NTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMF 205
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
C D+ A +F + E R +SWNS+++ ++S ++ M ++ TT
Sbjct: 206 GGCGDINEACSIFNEMNE--RDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTT 263
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ LLS + L G+ VH + YG + ++ + NTL+S+YS G A ++F +
Sbjct: 264 LSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP 323
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R +SW +M++ Y Q G AL++F M + + VT S ++ C GK
Sbjct: 324 ERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKI 383
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ GL+D +++ N LI Y KC + +A+++F +P+ V+W +I G A N E
Sbjct: 384 LHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAE 443
Query: 427 FVEALDLFHQLMELDLRP-NRVTFLAVLQAC-THTGFLEKGWAI 468
EA+ F + E + +T + +L +C TH ++ G I
Sbjct: 444 LNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPI 487
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MYSK G I+ A+++FD + +R SW M+SGY + G EA+ F + G P
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 348 VLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
+ S+++ C +S + + G F +A GL +V V + + Y+ G + +A+++F +
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
P++ VVSWT+++ + NG E ++ + ++ + N V+ +C GFL
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSC---GFL 173
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MYSK G I A+ +F + E+ SW M++G G +VEA+ F + + ++P+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 449 FLAVLQACTHTGFLEK 464
+++ AC + + K
Sbjct: 61 IASLVTACNKSSIMAK 76
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/624 (30%), Positives = 325/624 (52%), Gaps = 40/624 (6%)
Query: 16 SSTINQWNS-----QIREAVNKNEAHKTLLLFRQMKQNDI----EPNNLTFPFIAKACAK 66
SST Q++S ++ E+ N EA L F Q + +D+ + + +AC +
Sbjct: 62 SSTNRQFSSLHEIKKLCESGNLKEA----LDFLQRESDDVVLDSAQRSEAMGVLLQACGQ 117
Query: 67 LSDLIYSQMIHGHIVKSP-----FVKCDRLDCAYK----------IFDEMAVRDVASWNA 111
D+ + +H + S FV R+ Y +FD++ +++ WNA
Sbjct: 118 RKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNA 177
Query: 112 MLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ + + E+ + +F + + + D T+ + +A L L + +H +
Sbjct: 178 IVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKM 237
Query: 171 GVDADVSVCNTWISSYAKCDDLKMA-ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
+ +DV V N I+ Y KC ++ A + VF ++ + TV SWN+++ G +L
Sbjct: 238 DLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTK--TVSSWNALLCGYAQNSDPRKAL 295
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ Y M +G D T+ SLL + ++L G +H + G +D + +L+S+Y
Sbjct: 296 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLY 355
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
CG +A+VLFDG+ R+ VSW MI+GY+Q G DEA+ LF M + G P + ++
Sbjct: 356 ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIM 415
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+ C Q AL LGK +A L +++ V +++IDMY+K G IG ++ +F L EK
Sbjct: 416 CVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK 475
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
V SW +IAG ++G EAL+LF +++ L L+P+ TF +L AC+H G +E G
Sbjct: 476 DVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG---- 531
Query: 470 IIQYDDKGISYN---PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
++Y ++ ++ + P+L+HY+C+ D+LGR G++ +AL ++ MP D+ IW +LL +C
Sbjct: 532 -LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSC 590
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+IH N+ +GE VA L +LEP YV ++N +A G+WD V +R MK ++K G
Sbjct: 591 RIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAG 650
Query: 587 QSLFHINGKTCTFTAEDRYHAESE 610
S + GK F D E E
Sbjct: 651 CSWIEVGGKVHNFLIGDEMLPELE 674
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/620 (29%), Positives = 309/620 (49%), Gaps = 25/620 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ + V +T+ +F+ M++ D+E ++ TF + AC L L + +H
Sbjct: 390 IVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHC 449
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K+ + K +D A +F + V+D SWNA++VG A
Sbjct: 450 ITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGE 509
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ + M+ GI D V+ A + + K +HS I V ++ +V ++ I
Sbjct: 510 AINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLID 569
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+K D++ + V ++ ++V N+++ G ++ D+++ ++ ++ +GF+
Sbjct: 570 LYSKFGDVESSRKVLAHVDAS--SIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSN 627
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFD 303
T S+LS P + V G+ VH + + + D S+ +L+ +Y KC ++ A L +
Sbjct: 628 FTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLE 687
Query: 304 GICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ D + V WTA ISGYAQ G ++L +F+ M + D T S++ C + AL
Sbjct: 688 EVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALT 747
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
GK G +AL+DMYSKCG + + E+F L + ++ W +MI G
Sbjct: 748 DGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGF 807
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A NG EAL LF ++ E ++P+ VT L VL AC+H G + +G +D Y
Sbjct: 808 AKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHF----FDSMSQVYG 863
Query: 482 --PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P +DHY+C+ DLLGR G L++A + + +P ++D IW T L AC++H + E G+ A
Sbjct: 864 IVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAA 923
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L ++EP S++ YV +++ +A G W R M+ V KFPG S + K F
Sbjct: 924 KKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVF 983
Query: 600 TAEDRYHAESELTYPVLDCL 619
+D +H ++ Y +LD L
Sbjct: 984 VVQDTHHPDALSIYKMLDDL 1003
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 253/525 (48%), Gaps = 23/525 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L RI +ST+ WN+ I + L++ MK+ + P TF I A A ++
Sbjct: 281 LKRIRMTSTV-AWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTA 339
Query: 70 LIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH VK + +VK + A K+FD +++ WNA+L G
Sbjct: 340 FDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYG 399
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
F Q E +++F MR ++AD T + + A I+ L L + VH I G+DAD
Sbjct: 400 FVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDAD 459
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V N + Y+K + +A+ +F I ++ VSWN+++ G + ++ +++N + M
Sbjct: 460 LFVANAMLDMYSKLGAIDVAKALFSLIP--VKDSVSWNALIVGLAHNEEEGEAINMLKRM 517
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G LD + + +++ A+ G+ +HS I Y + +V ++LI +YSK GD+
Sbjct: 518 KFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDV 577
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+S+R + + + V A+I+G Q DEA+ LF + G P T S++SGC
Sbjct: 578 ESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGC 637
Query: 356 GQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVS 413
+ + +GK Y S L + + +L+ +Y KC + DA +L +P+ K +V
Sbjct: 638 TRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVE 697
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
WT I+G A NG V++L +F ++ D+R + TF +VL+AC+ L G I +
Sbjct: 698 WTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIV 757
Query: 474 DDKGISYNPE----LDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
+SY +D YS D++ KE + MP S
Sbjct: 758 KSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNS 802
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 211/468 (45%), Gaps = 58/468 (12%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKI 97
P+ + AC++L L + + +H ++KS F KC +D A ++
Sbjct: 155 PDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRM 214
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
FD +A D W +M+ G+ ++G + L LF M +G D VT
Sbjct: 215 FDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVT-------------- 260
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
C T IS+ A L A + I R+ + V+WN+++A
Sbjct: 261 ---------------------CVTIISTLASMGRLGDARTLLKRI--RMTSTVAWNAVIA 297
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
+ + Y+ M G +T S+LS+ A +GR +H+ + +G D
Sbjct: 298 SYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDA 357
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+V V ++LI++Y K G I A+ +FD ++ V W A++ G+ Q +E +++F M
Sbjct: 358 NVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMR 417
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
A D T +S++ C +L+LG+ G+ ++ V NA++DMYSK G+I
Sbjct: 418 RADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAID 477
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A+ LF +P K VSW +I G A N E EA+++ ++ + + V+F + AC+
Sbjct: 478 VAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACS 537
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEA 503
+ +E G Q I YN +H S + DL + G ++ +
Sbjct: 538 NIWAIETGK-----QIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESS 580
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 23/436 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I + L LF +M++ P+ +T I A +
Sbjct: 226 WTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMG------------- 272
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
RL A + + + +WNA++ ++Q G V L+ +M+ G+
Sbjct: 273 --------RLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTR 324
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T + AA + + +H+ + G+DA+V V ++ I+ Y K + A+ VF
Sbjct: 325 STFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 384
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
E+ +V WN+++ G + ++++ +++M D T VS+L + + +L
Sbjct: 385 STEK--NIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLD 442
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
GR VH I G D D+ V N ++ MYSK G ID A+ LF I + VSW A+I G A
Sbjct: 443 LGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLA 502
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ EA+ + M+ G D V+ + I+ C A+E GK + + + N
Sbjct: 503 HNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHA 562
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V ++LID+YSK G + +R++ + +V +I G N EA++LF Q+++
Sbjct: 563 VGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDG 622
Query: 442 LRPNRVTFLAVLQACT 457
+P+ TF ++L CT
Sbjct: 623 FKPSNFTFTSILSGCT 638
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 139/307 (45%), Gaps = 22/307 (7%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S+I N+ I V N + + LF+Q+ ++ +P+N TF I C + + +
Sbjct: 589 ASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQ 648
Query: 76 IHGHIVKSP---------------FVKCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQM 119
+H + +KS ++KC L+ A K+ +E+ +++ W A + G+AQ
Sbjct: 649 VHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQN 708
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G+ L +F+ MR +++D T + +A L+ K +H + G + +
Sbjct: 709 GYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETAT 768
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ + Y+KC D+ + +F ++ R + ++ WNSM+ G +++L ++ M +
Sbjct: 769 SALMDMYSKCGDVISSFEIFKELKNR-QNIMPWNSMIVGFAKNGYANEALLLFQKMQESQ 827
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVH---SHGIHYGFDLDVSVINTLISMYSKCGDID 296
+ D T++ +L C A + +H S YG V LI + + G +
Sbjct: 828 IKPDDVTLLGVL--IACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQ 885
Query: 297 SARVLFD 303
A+ + D
Sbjct: 886 KAQEVID 892
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDGICD---RTRVSWTAMISGY 320
++H+ + G L + + L+ +Y + G + A R L C + + ++++S +
Sbjct: 74 VLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRAL--ACCTGAPASSAAASSVLSCH 131
Query: 321 AQKGDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
A+ G + L F + + G PD + ++S C + GALE G+ G +
Sbjct: 132 ARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSS 191
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V L+DMY+KCG + DAR +F + + WT+MIAG G + +AL LF ++ +
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEK 251
Query: 440 LDLRPNRVTFLAVLQACTHTGFL 462
+ P++VT + ++ G L
Sbjct: 252 MGSVPDQVTCVTIISTLASMGRL 274
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 252/460 (54%), Gaps = 44/460 (9%)
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V W ++ + D F +L++Y M+ + + + T+ SLL + L R VH
Sbjct: 85 NVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVH 140
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
SH I +G + V L+ Y++ GD+ SA+ LFD + +R+ VS+TAM++ YA+ G L
Sbjct: 141 SHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLP 200
Query: 328 EALRLFFAMEAAGEL--------------------------------------PDLVTVL 349
EA LF M + P+ +TV+
Sbjct: 201 EARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVV 260
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+++S CGQ GALE GKW +Y + G+K NV V AL+DMY KCGS+ DAR++F + K
Sbjct: 261 AVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGK 320
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
VV+W +MI G ++G EAL LFH++ + ++P+ +TF+AVL AC H G + KGW +
Sbjct: 321 DVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVF 380
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
D G+ P+++HY CM +LLGR G+++EA D V+SM ++ D +WGTLL AC+IH
Sbjct: 381 DSMKDGYGM--EPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIH 438
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+ +GE +A L S+ YV ++N YA W GVA +R+MMK + V+K PG S
Sbjct: 439 SNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSS 498
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
+ + F A DR H S+ Y +L+ + +E Y+
Sbjct: 499 IEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYT 538
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 42/382 (10%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
++ + L + +F +V W ++ A + L + M IQ +
Sbjct: 61 LQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPN 120
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T+ L +A L ++VHS I G+ + + V + +YA+ D+ A+ +F
Sbjct: 121 AFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFD 176
Query: 201 GIEER-----------------------------LRTVVSWNSMVAGCTYGDKFDDSLNF 231
+ ER ++ VV WN M+ G +++L F
Sbjct: 177 AMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVF 236
Query: 232 YRHMMYN-------GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+R MM R + TVV++LSS AL G+ VHS+ + G ++V V
Sbjct: 237 FRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTA 296
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+ MY KCG ++ AR +FD + + V+W +MI GY G DEAL+LF M G P
Sbjct: 297 LVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPS 356
Query: 345 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+T +++++ C +G + G + FD+ G++ V ++++ + G + +A +L
Sbjct: 357 DITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLV 416
Query: 404 YALP-EKIVVSWTTMIAGCALN 424
++ E V W T++ C ++
Sbjct: 417 RSMEVEPDPVLWGTLLWACRIH 438
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 115/280 (41%), Gaps = 48/280 (17%)
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y+ G + + LF + WT +I+ +A AL + M P+ T+
Sbjct: 65 YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
S++ C L + ++A GL ++ V L+D Y++ G + A++LF A+PE
Sbjct: 125 SSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELD--------------------------- 441
+ +VS+T M+ A +G EA LF + D
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240
Query: 442 -----------LRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSC 489
+RPN +T +AVL +C G LE G W S ++ + GI N + +
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVE--NNGIKVNVRVG--TA 296
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ D+ + G L++A M K D W +++ IH
Sbjct: 297 LVDMYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMGYGIH 335
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQN-------DIEPNNLTFPFIAKACAKLSDLIYSQ 74
WN I ++ L+ FR+M + PN +T + +C ++ L +
Sbjct: 217 WNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGK 276
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H ++ + + KC L+ A K+FD M +DV +WN+M++G+ G
Sbjct: 277 WVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHG 336
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
F + L+LF+ M +G++ +T + + A HA
Sbjct: 337 FSDEALQLFHEMCCIGVKPSDITFVAVLTACAHA 370
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 192/646 (29%), Positives = 314/646 (48%), Gaps = 36/646 (5%)
Query: 15 RSSTINQ--WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + + L FR M D+EP++ T +A AC+
Sbjct: 154 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEG 213
Query: 70 LIYSQMIHGHIVK-------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
L+ + +H + ++ + + K +L + + RD+ +WN +L
Sbjct: 214 LLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSL 273
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDAD 175
Q L M L G++ D T+ + A H + L K +H++ + G +D +
Sbjct: 274 CQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 333
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + + Y C + VF G+ +R + WN+M+ G + +++L + M
Sbjct: 334 SFVGSALVDMYCNCKQVLSGCRVFDGMFDR--KIGLWNAMITGYAQNEYDEEALLLFIEM 391
Query: 236 MYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ G + TT+ ++ + V A + +H + G D D V N L+ MYS+ G
Sbjct: 392 EESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGK 451
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM--------EAAGEL---P 343
ID A+ +F + DR V+W +I+GY ++AL + M E A + P
Sbjct: 452 IDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKP 511
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++F
Sbjct: 512 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 571
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+P + V++W ++ ++G +A+D+ +M ++PN VTF++V AC+H+G +
Sbjct: 572 DQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVN 631
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWGTL 522
+G I D G+ P DHY+C+ DLLGR G++KEA + +P D AG W +L
Sbjct: 632 EGLKIFYNMKKDYGVE--PSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSL 689
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L AC+IH N+EIGE A L +LEP+ A+ YV +AN Y+ G W +R MK V+
Sbjct: 690 LGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVR 749
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K PG S + F A D H +SE L+ L R+E Y
Sbjct: 750 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGY 795
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 146/550 (26%), Positives = 260/550 (47%), Gaps = 38/550 (6%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
I +S + W +R V N + +L + M I+P+N FP + KA A L D+
Sbjct: 52 ISQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDL 111
Query: 73 SQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ IH H+ K + + KC YK+FD ++ R+ SWN+++
Sbjct: 112 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 171
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLLKSVHSFGIHIGVDA 174
E L F M ++ T++ + A + + L + K VH++G+ G +
Sbjct: 172 SFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-EL 230
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ + NT ++ Y K L ++++ E R +V+WN++++ ++F ++L + R
Sbjct: 231 NSFIINTLVAMYGKMGKLASSKVLLGSFEG--RDLVTWNTVLSSLCQNEQFLEALEYLRE 288
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCG 293
M+ G D T+ S+L + E L G+ +H++ + G D + V + L+ MY C
Sbjct: 289 MVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 348
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMI 352
+ S +FDG+ DR W AMI+GYAQ +EAL LF M E+AG L + T+ ++
Sbjct: 349 QVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVV 408
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
C +SGA + + GL + V NAL+DMYS+ G I A+ +F + ++ +V
Sbjct: 409 PACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLV 468
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELD-----------LRPNRVTFLAVLQACTHTGF 461
+W T+I G + +AL + H++ L+ L+PN +T + +L +C
Sbjct: 469 TWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSA 528
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
L KG I + + ++ S + D+ + G L+ + +PI+ + W
Sbjct: 529 LAKGKEIHAYAIKN---NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNV 584
Query: 522 LLCACKIHLN 531
++ A +H N
Sbjct: 585 IVMAYGMHGN 594
>gi|147771209|emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
Length = 598
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 184/598 (30%), Positives = 308/598 (51%), Gaps = 35/598 (5%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE----PNNLTFPFIAKACAKLSDLIYSQ 74
+++W + IR + + F+ + +N E ++ + + KAC +LS + +
Sbjct: 1 MSKWLTMIRRHASDANPFHAISFFKAIPRNQRENAPLDDHFVYASLIKACNRLSAIREGR 60
Query: 75 MIHGHIVKSP--------------FVKCDR-LDCAYKIFDEMAVRDVASWNAMLVGF--- 116
IH H+++ + ++ + CA +FD++ + + + N M+ GF
Sbjct: 61 SIHCHVLRFGLDYNVNVLNALVYLYSSAEKSMGCACALFDKIPEKTIVTVNCMISGFVKN 120
Query: 117 ----AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
A +G VL +++R ++ ++VT++ L + S+ S+HS+ +
Sbjct: 121 KRFHAGVGLFNRVLGGGFDLR---VKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSL 177
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D V N I YA+ + + A +F E +R +VSWN+M+AG + ++ + +
Sbjct: 178 DLKNEVRNALIHLYAEFEYMDAAAKLF--HETNVRDLVSWNTMIAGYAKNNDCRNAFSLF 235
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
R M D ++VSL+S+ L G+ VH+ G ++ + LI+MYSKC
Sbjct: 236 REMRIGNVECDRVSLVSLISACTNXRDLHMGKAVHAFIKVSGMEMMIHFETALINMYSKC 295
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G I+ R +FD + D SW +MI GY + G EAL L+ +++ PD VT+L +I
Sbjct: 296 GSIELGRKVFDELADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGLI 355
Query: 353 SGCGQSGALELGKWFDNY-ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
S C SG L G ++Y S L + ++CNALIDMY+KCGS+ A +F +P + V
Sbjct: 356 SACRSSGDLHQGIQINSYIESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDV 415
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
+SWT++I G A+NGE EAL F ++ + PN VTFL VL AC H G ++KG + I
Sbjct: 416 ISWTSIIVGYAINGEGEEALLAFRKMGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYDI 475
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
K P+++H CM D+ R G L+EA FV+ MP++ +A +W L+ AC++H +
Sbjct: 476 MC--KYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMPVEPNAVVWRMLINACRVHGD 533
Query: 532 IEIGEYVAYCLFKLEP-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+G + L ++ H +V +N +A GRWD V R++M + K PG+S
Sbjct: 534 FNLGLNLVSGLIDVKTEHGPEDHVISSNIFAEAGRWDDVLQERSLMVAQKAVKLPGKS 591
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 287/556 (51%), Gaps = 33/556 (5%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +F+ + ++ WN M G A + ++L+ M +G+ + T L
Sbjct: 51 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLL 110
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--- 205
++ K + +H + +G + D+ V + IS Y K K A VF G R
Sbjct: 111 KSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVV 170
Query: 206 --------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
++ VVSWN++++G ++L+ ++ MM
Sbjct: 171 SYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTN 230
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D +T+V+++S+ ++ GR VHS +G ++ ++N LI +YSKCG++++A
Sbjct: 231 VKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETAC 290
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF G+ ++ +SW MI GY EAL LF M +GE P+ VT+LS++ C Q G
Sbjct: 291 GLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLG 350
Query: 360 ALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
A++ G+W Y G+ + + +LIDMY+KCG I A ++F ++ + + + M
Sbjct: 351 AIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAM 410
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I G A++G A D+F ++ + + P+ +TF+ +L AC+H+G L+ G I + +
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR--RIFRSMTQN 468
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
P+L+HY CM DLLG G KEA + + +M ++ D IW +LL ACK+H N+E+GE
Sbjct: 469 YKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGES 528
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A L K+EP + YV ++N YA GRW+ VANIR ++ +KK PG S I+
Sbjct: 529 FAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVH 588
Query: 598 TFTAEDRYHAESELTY 613
F D++H + Y
Sbjct: 589 EFIIGDKFHPRNREIY 604
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 223/468 (47%), Gaps = 60/468 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R ++ + L+ M + PN+ TFPF+ K+CAKL Q IHGH++
Sbjct: 71 WNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVL 130
Query: 82 K--------------SPFVKCDR-------------------------------LDCAYK 96
K S +VK R ++ A K
Sbjct: 131 KLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQK 190
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FDE+ V+DV SWNA++ G+A G + L LF M ++ D T++ + A +
Sbjct: 191 MFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS 250
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+ L + VHS+ G+ +++ + N I Y+KC +++ A +F G+ + V+SWN+M+
Sbjct: 251 IQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSN--KDVISWNTMI 308
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY--G 274
G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H + G
Sbjct: 309 GGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKG 368
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
S+ +LI MY+KCGDI++A +F+ + RT + AMI G+A G + A +F
Sbjct: 369 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFS 428
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDM 389
M G PD +T + ++S C SG L+LG+ NY + L+ +ID+
Sbjct: 429 RMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEH----YGCMIDL 484
Query: 390 YSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
G +A E+ + E V W +++ C ++G VE + F Q
Sbjct: 485 LGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGN-VELGESFAQ 531
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 39/303 (12%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS---ARVLFDGICDRTRVSWTAMISGY 320
R++H+ I G ++ L+ + D A +F+ I + + W M G+
Sbjct: 19 RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
A D A++L+ M + G LP+ T ++ C + + G+ + G + ++
Sbjct: 79 ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF------------- 427
V +LI MY K G DA ++F + VVS+T +I G A G
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198
Query: 428 ------------------VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
EALDLF ++M+ +++P+ T + V+ AC +G ++ G +
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
DD G+ N ++ + + DL + G+++ A Q + K D W T++ H
Sbjct: 259 -SWIDDHGLGSNLKI--VNALIDLYSKCGEVETACGLFQGLSNK-DVISWNTMI-GGYTH 313
Query: 530 LNI 532
LN+
Sbjct: 314 LNL 316
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 266/471 (56%), Gaps = 4/471 (0%)
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A ++ ++L+ ++ VH+ G+ ++ V N I Y+ L A +F G+ +R
Sbjct: 68 ALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGM--CVRDS 125
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSW+ MV G + + +R ++ G R D T+ ++ + + L GRL+H
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+G DLD V L+ MY KC +I+ AR LFD + +R V+WT MI GYA+ G +E+
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L LF M G +PD V +++++ C + GA+ + D+Y + +V++ A+IDM
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 305
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y+KCG + ARE+F + EK V+SW+ MIA +G+ +ALDLF ++ + P+++T
Sbjct: 306 YAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITL 365
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
++L AC+H G +E+G ++D S ++ HY+C+ DLLGR G+L EAL ++S
Sbjct: 366 ASLLYACSHAGLVEEGLRFFSSMWED--YSVRTDVKHYTCVVDLLGRAGRLDEALKLIKS 423
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
M I+ D G+WG L AC+ H ++ + E A L +L+ + YV ++N YA GRW+ V
Sbjct: 424 MTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDV 483
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
A IR +M + ++KK PG + ++ K+ F+ D H S+ Y +L L+
Sbjct: 484 AKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLS 534
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 261/465 (56%), Gaps = 4/465 (0%)
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+L+ ++ VH G+ ++ V N + Y+ L A +F G+ +R VSW+ M
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGM--CVRDSVSWSVM 807
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
V G + + +R ++ G R D T+ ++ + + L GRL+H +G
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
DLD V L+ MY KC +I+ AR LFD + +R V+WT MI GYA+ G+ +E+L LF
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M G +PD V +++++ C + GA+ + D+Y + +V++ A+IDM++KCG
Sbjct: 928 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ ARE+F + EK V+SW+ MIA +G+ +ALDLF ++ + PN++T +++L A
Sbjct: 988 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 1047
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
C+H G +E+G ++D S ++ HY+C+ DLLGR G+L EAL + SM + D
Sbjct: 1048 CSHAGLVEEGLRFFSXMWED--YSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKD 1105
Query: 516 AGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTM 575
G+WG L AC+ H ++ + E A L +L+P + Y+ ++N YA GRW+ VA IR +
Sbjct: 1106 EGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDL 1165
Query: 576 MKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
M + ++KK PG + ++ K+ F+ D H S+ Y +L L
Sbjct: 1166 MSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLG 1210
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 183/354 (51%), Gaps = 8/354 (2%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
LD AY +FD M VRD SW+ M+ GFA++G N F + G + D T+ + +A
Sbjct: 110 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRA 169
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
K+L + + +H G+D D VC + Y KC +++ A +F ++E R +V
Sbjct: 170 CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQE--RDLV 227
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHS 268
+W M+ G K ++SL + M G D +V+++ F C + A+ + R++
Sbjct: 228 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVV--FACAKLGAMHKARIIDD 285
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ F LDV + +I MY+KCG ++SAR +FD + ++ +SW+AMI+ Y G +
Sbjct: 286 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 345
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALI 387
AL LF M ++G LPD +T+ S++ C +G +E G ++F + ++ +V ++
Sbjct: 346 ALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVV 405
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
D+ + G + +A +L ++ EK W + C + + V A L+EL
Sbjct: 406 DLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLEL 459
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 178/354 (50%), Gaps = 8/354 (2%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
LD AY +FD M VRD SW+ M+ GFA++G N F + G + D T+ + +A
Sbjct: 786 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRA 845
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
K+L + + +H G+D D VC + Y KC +++ A +F + E R +V
Sbjct: 846 CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXE--RDLV 903
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHS 268
+W M+ G ++SL + M G D +V+++ F C + A+ + R +
Sbjct: 904 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVV--FACAKLGAMHKARTIDD 961
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ F LDV + +I M++KCG ++SAR +FD + ++ +SW+AMI+ Y G +
Sbjct: 962 YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 1021
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALI 387
AL LF M +G LP+ +T++S++ C +G +E G ++F ++ +V ++
Sbjct: 1022 ALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVV 1081
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
D+ + G + +A +L ++ EK W + C + + A L+EL
Sbjct: 1082 DLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLEL 1135
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 136/281 (48%), Gaps = 8/281 (2%)
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
+S+ V L Q R VH+ +G ++ V N LI YS +D A LFDG+C R
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
VSW+ M+ G+A+ GD F + G PD T+ +I C L++G+ +
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
GL + VC AL+DMY KC I DAR LF + E+ +V+WT MI G A G+ E+
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--S 488
L LF ++ E + P++V + V+ AC G + K I DD +LD +
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARII-----DDYIQRKKFQLDVILGT 300
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
M D+ + G ++ A + M K+ W ++ A H
Sbjct: 301 AMIDMYAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYH 340
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 131/275 (47%), Gaps = 8/275 (2%)
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
P L Q R VH +G ++ V N L+ YS +D A LFDG+C R VSW+ M
Sbjct: 748 PTNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVM 807
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
+ G+A+ GD F + G PD T+ +I C L++G+ + GL
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ VC AL+DMY KC I DAR LF + E+ +V+WT MI G A G E+L LF +
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLL 494
+ E + P++V + V+ AC G + K I DD +LD + M D+
Sbjct: 928 MREEGVVPDKVAMVTVVFACAKLGAMHKARTI-----DDYIQRKKFQLDVILGTAMIDMH 982
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G ++ A + M K+ W ++ A H
Sbjct: 983 AKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYH 1016
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 23/275 (8%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS---------------PFV 86
FR++ + P+N T PF+ +AC L +L ++IH HIV +V
Sbjct: 148 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH-HIVYKFGLDLDHFVCAALVDMYV 206
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC ++ A +FD+M RD+ +W M+ G+A+ G L LF MR G+ D V ++
Sbjct: 207 KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 266
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ A + + + + DV + I YAKC ++ A +F +EE
Sbjct: 267 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE-- 324
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA-LVQG-- 263
+ V+SW++M+A Y + +L+ + M+ +G D T+ SLL + C A LV+
Sbjct: 325 KNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLL--YACSHAGLVEEGL 382
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
R S Y DV ++ + + G +D A
Sbjct: 383 RFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEA 417
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 21/274 (7%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH----------GHIVKSPFV----K 87
FR++ + P+N T PF+ +AC L +L ++IH H V + V K
Sbjct: 824 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 883
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C ++ A +FD+M RD+ +W M+ G+A+ G L LF MR G+ D V ++ +
Sbjct: 884 CREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTV 943
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A + +++ + DV + I +AKC ++ A +F +EE +
Sbjct: 944 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE--K 1001
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA-LVQG--R 264
V+SW++M+A Y + +L+ + M+ +G + T+VSLL + C A LV+ R
Sbjct: 1002 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLL--YACSHAGLVEEGLR 1059
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
Y DV ++ + + G +D A
Sbjct: 1060 FFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEA 1093
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I +A+++L+LF +M++ + P+ + + ACAKL + +++I +I
Sbjct: 229 WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 288
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC ++ A +IFD M ++V SW+AM+ + G L
Sbjct: 289 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 348
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M G+ D +T+ L A HA
Sbjct: 349 LFPMMLSSGMLPDKITLASLLYACSHA 375
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I A+++L+LF +M++ + P+ + + ACAKL + ++ I +I
Sbjct: 905 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 964
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC ++ A +IFD M ++V SW+AM+ + G L
Sbjct: 965 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 1024
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M GI + +T++ L A HA
Sbjct: 1025 LFPMMLRSGILPNKITLVSLLYACSHA 1051
>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 290/586 (49%), Gaps = 28/586 (4%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL + + WN+ I +H LF +M++ + +P T + +C
Sbjct: 119 RLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQ 178
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ + IHG VK S + KC LD +F E+ + V SWN M+
Sbjct: 179 LFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIG 238
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
F Q G + +F M + A+ VT++ + A + +H + IG+
Sbjct: 239 AFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTG------CIHCYATKIGLVE 292
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD--DSLNFY 232
+VSV + + SY KC +++AEL++ + + + +V+ ++++ Y +K D + Y
Sbjct: 293 NVSVVTSLVCSYVKCGYIELAELIY--MSKLKKNLVALTAIIS--HYAEKGDMGSVVRLY 348
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
+ + +LD +V ++ F P+ + G H +G+ G +D V N ISMYSK
Sbjct: 349 SIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKF 408
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
+ID+ LF + +T SW ++IS AQ G +A+ LF M +G PD +T+ S++
Sbjct: 409 DNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLL 468
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S C Q+G L G+ Y L V AL+DMY KCG + A +F ++ E +
Sbjct: 469 SACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLA 528
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SW ++I+G L G AL + ++ME ++PN++TF +L ACTH G +E+G I
Sbjct: 529 SWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIM 588
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
GI PE H + M +LGR G +EA+ F+Q+M D+ +WG LL AC IH +
Sbjct: 589 KKKFGIV--PESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEV 646
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
++GE VA LF + +V M+N YA RW+ VA IR MM+
Sbjct: 647 KLGESVAKKLFFSNCRNGGFFVLMSNLYAASRRWNDVARIRKMMRE 692
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 146/551 (26%), Positives = 252/551 (45%), Gaps = 59/551 (10%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKA--------------CAKLSDLIYSQMIHGHIVKSP 84
LLLFR++ ++ ++PN+ TF + KA C++ ++ + + H +K
Sbjct: 35 LLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSE-NEKAEANQLQTHFIKWG 93
Query: 85 F--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
F K + A ++FD+ +DV SWNA++ G+ + G + +LF
Sbjct: 94 FDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFV 153
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
MR T++ L + + KS+H G+ G+D D V N +S Y KC
Sbjct: 154 EMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCA 213
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
DL +L+F I E ++VVSWN+M+ F +++ ++ M+ + T+VS+
Sbjct: 214 DLDGVKLLFGEITE--KSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSI 271
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
LS A +H + G +VSV+ +L+ Y KCG I+ A +++ +
Sbjct: 272 LS------ANANTGCIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNL 325
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
V+ TA+IS YA+KGD+ +RL+ ++ D V ++ +I G + +G F Y
Sbjct: 326 VALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGY 385
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
GL + +V N I MYSK +I LF + +K + SW ++I+ CA G ++A
Sbjct: 386 GVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDA 445
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--S 488
+ LF Q+ P+ +T ++L AC G L G + + N +L+ + +
Sbjct: 446 MALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRN-----NLDLEGFVGT 500
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPH 548
+ D+ + G++ A + +SM A W +L+ Y LF H
Sbjct: 501 ALVDMYVKCGRMDFAENVFKSMKEPCLAS-WNSLIS--------------GYGLFGFHNH 545
Query: 549 SAAPYVEMANK 559
+ Y EM K
Sbjct: 546 ALLCYTEMMEK 556
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/658 (29%), Positives = 316/658 (48%), Gaps = 64/658 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE-PNNLTFPFIAKACAKLSDLIYSQMI 76
I W + + N + H+ L L+ +M ++ IE PN + + KAC + ++ +M+
Sbjct: 68 NIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMV 127
Query: 77 HGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H HI ++ +VKC L A ++F E+ ++ SWN +++G+A+ G +
Sbjct: 128 HYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLI 187
Query: 123 ENVLRLFYNM------------------------RLV------GIQADFVTVMGLTQAAI 152
++ ++LF M R V G++ D T + +A
Sbjct: 188 DDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACG 247
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR----- 207
+ L L + +H + I G ++ + I Y+ C L A +F ++ R
Sbjct: 248 CSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIF---DQYFRNSSVS 304
Query: 208 -TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++ WNSM++G + ++L+ HM +G R D T +L + + L V
Sbjct: 305 ESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQV 364
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H I G++LD V + LI +Y+K G I++A LF+ + D+ V+W+++I+G A+ G
Sbjct: 365 HGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSD 424
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
A LF M G D + ++ C + + GK + G + +V AL
Sbjct: 425 KLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTAL 484
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY+KCG I DA LF L E +SWT++I GCA NG EA+ L H+++E +PN+
Sbjct: 485 IDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNK 544
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+T L VL AC H+G +E+ W + + G+ PE HY+CM D+LG+ G+ +EA+
Sbjct: 545 ITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPE--HYNCMVDILGQAGRFEEAVKL 602
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+ MP K D IW +LL AC + N ++ VA L P + Y+ ++N YA G W
Sbjct: 603 ISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMW 662
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELT-------YPVLD 617
D V+ +R +K+ KK G+ + I K HA+ L YP+L+
Sbjct: 663 DSVSKVRETVKKIG-KKRAGKIFYEIPFKFYFMEHLHLGHAKQGLNGGVVKVIYPILE 719
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 228/527 (43%), Gaps = 64/527 (12%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIF 98
N++ F + C + + ++ +H HI+KS F KC + A +F
Sbjct: 4 NHIQIAF--RYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMF 61
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI-QADFVTVMGLTQAAIHAKHL 157
DEM R++ SW M+ L L+ M I Q + + +A +++
Sbjct: 62 DEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNV 121
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT--------- 208
L K VH +D D+ + N + Y KC L+ A+ VFC I + T
Sbjct: 122 ELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGY 181
Query: 209 --------------------VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
+VSWNS++AG + +L F M G ++D T
Sbjct: 182 AKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLV-DNASSRALRFVSMMHGKGLKMDEFTFP 240
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L + C + L+ GR +H + I GF+ I+ LI MYS C + A +FD
Sbjct: 241 SVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRN 300
Query: 309 TRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ VS W +M+SG+ GD EAL + M +G D T ++ C L L
Sbjct: 301 SSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSL 360
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
+ + G + + +V + LID+Y+K GSI +A LF LP+K VV+W+++I GCA
Sbjct: 361 ASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCAR 420
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII----QYDDKGIS 479
G A LF ++ L L+ + VL+AC+ + G + + Y+ +G+
Sbjct: 421 FGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVV 480
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+D Y+ + G +++AL + + D W +++ C
Sbjct: 481 TTALIDMYA-------KCGDIEDALSLFGCLS-EIDTMSWTSIIVGC 519
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 193/441 (43%), Gaps = 69/441 (15%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
KS+HS I G + + N IS Y+KC + A +F E R +VSW +MV+ T
Sbjct: 23 KSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMF--DEMPHRNIVSWTTMVSVLT 80
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVS-LLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
++L+ Y M+ + + S +L + + G++VH H D+D+
Sbjct: 81 NSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDI 140
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
++N L+ MY KCG + A+ +F I + SW +I GYA++G +D+A++LF M
Sbjct: 141 VLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPE- 199
Query: 340 GELPDLVTVLSMISG----------------------------------CGQSGALELGK 365
PD+V+ S+I+G CG S L LG+
Sbjct: 200 ---PDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGR 256
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-----WTTMIAG 420
Y G + + +ALIDMYS C + +A ++F VS W +M++G
Sbjct: 257 EIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSG 316
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
+NG++VEAL + + +R + TF VL+ C + L Q I+
Sbjct: 317 HVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLAS-----QVHGFVITS 371
Query: 481 NPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK----------- 527
ELD S + D+ ++G + AL + +P K D W +L+ C
Sbjct: 372 GYELDCVVGSILIDIYAKQGSINNALRLFERLPDK-DVVAWSSLITGCARFGSDKLAFSL 430
Query: 528 ----IHLNIEIGEYVAYCLFK 544
IHL ++I +V + K
Sbjct: 431 FMDMIHLGLQIDHFVISIVLK 451
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 198/467 (42%), Gaps = 67/467 (14%)
Query: 10 LNRIYRSSTINQ----WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
++ +R+S++++ WNS + V + + L + M ++ + + TF + K C
Sbjct: 294 FDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICM 353
Query: 66 KLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
+L + +HG ++ S + K ++ A ++F+ + +DV +W++
Sbjct: 354 NFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSS 413
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ G A+ G + LF +M +G+Q D FV + L + A H K VHS +
Sbjct: 414 LITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASH-QHGKQVHSLCLKK 472
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G +++ V I YAKC D++ A +F + E +SW S++ GC + +++++
Sbjct: 473 GYESEGVVTTALIDMYAKCGDIEDALSLFGCLSE--IDTMSWTSIIVGCAQNGRAEEAIS 530
Query: 231 FYRHMMYNGFRLDVTTVVSLLS----SFVCPEAL-VQGRLVHSHGI-----HYGFDLDVS 280
M+ +G + + T++ +L+ S + EA V + +HG+ HY
Sbjct: 531 LLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHY------- 583
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
N ++ + + G + A L + + + W++++ + D L A
Sbjct: 584 --NCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRD--LANIVAEHLL 639
Query: 340 GELPDLVTVLSMISG-----------------CGQSGALELGKWFDNYACSGGLKDNVMV 382
P+ V+V M+S + G GK F +++ +
Sbjct: 640 ATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYFMEHLHL 699
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+A K G G ++ Y + E +VSW +IAG A N E
Sbjct: 700 GHA------KQGLNGGVVKVIYPILEPDLVSWNNVIAGLADNASPYE 740
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 314/602 (52%), Gaps = 94/602 (15%)
Query: 41 LFRQMKQN-DIEPNNLTFPFIAKACAKLSDLIYSQMIHG-----HIVKSP----FVKCDR 90
LF+ M Q+ DI+PN + + K+ S L + ++ H V++ + K
Sbjct: 75 LFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGP 134
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
++ A K+FDEM R VA WN M+ G+ + G E LF+ VMG +
Sbjct: 135 IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH-------------VMGDQE- 180
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ +V T I+ +AK +LK A + F + ER +VV
Sbjct: 181 ---------------------ISRNVITWTTMITGHAKKGNLKTARMYFDKMPER--SVV 217
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTT---VVSLLSSFVCP---EALVQ- 262
SWN+M++G G ++++ + M+ G + D TT V+S SS P E++V+
Sbjct: 218 SWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRK 277
Query: 263 ------------------------GRLVHSHGIH-----YGFDLDVSVINTLISMYSKCG 293
G L +H I Y + V N +IS Y++ G
Sbjct: 278 LDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVP-WNAMISAYARVG 336
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA--GELPDLVTVLSM 351
D+ SA+ LFD + R VSW +MI+GY Q G+ +A++LF M ++ PD VT++S+
Sbjct: 337 DLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSV 396
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
S CG G L LG W + ++ ++ V N+LI+MYS+CGS+ DA +F + + +
Sbjct: 397 FSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDL 456
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
VS+ T+I+G A +G +E+++L ++ E + P+R+T++A+L AC+H G L++G
Sbjct: 457 VSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEG------ 510
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
Q + I + P++DHY+CM D+LGR G+L+EA+ +QSMP++ AGI+G+LL A IH
Sbjct: 511 QRLFESIKF-PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQ 569
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+E+GE A LFK+EPH++ Y ++N YA GRW +R M++ VKK G S
Sbjct: 570 VELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 629
Query: 592 IN 593
N
Sbjct: 630 HN 631
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 212/480 (44%), Gaps = 100/480 (20%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENV-LRLFYNMRL---VGIQADFVTVMGLTQAAI 152
IF DV + ML ++Q+G V + LF +M + A F +VM + +
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSE 102
Query: 153 HAKHLS-LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
L+ +LKS G D D V N + YAK ++ A +F + +R TV
Sbjct: 103 SMLFLAHVLKS--------GYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDR--TVAD 152
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN M++G + C L H G
Sbjct: 153 WNVMISGY----------------------------------WKCGNEEEASTLFHVMGD 178
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
+V T+I+ ++K G++ +AR+ FD + +R+ VSW AM+SGYAQ G +E +R
Sbjct: 179 Q-EISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIR 237
Query: 332 LFFAMEAAGEL-PDLVTVLSMISGCGQSG----ALELGKWFDNYACSGGLKDNVMVCNAL 386
LF M + G + PD T ++IS C G + + + D+ G + N V AL
Sbjct: 238 LFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKV---GFRPNYFVKTAL 294
Query: 387 IDMYSKCGS-------------------------------IGD---ARELFYALPEKIVV 412
+DM++KCG+ +GD A+ LF +P++ V
Sbjct: 295 LDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTV 354
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHTGFLEKG-WAIS 469
SW +MIAG NGE +A+ LF +++ E +P+ VT ++V AC H G L G WA+S
Sbjct: 355 SWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVS 414
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
I++ + IS + Y+ + ++ R G +++A+ Q M + D + TL+ H
Sbjct: 415 ILKVNHIQIS----ISVYNSLINMYSRCGSMQDAVLIFQEMATR-DLVSYNTLISGFAEH 469
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 191/438 (43%), Gaps = 85/438 (19%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN I + LF M +I N +T ++ MI
Sbjct: 149 TVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVIT---------------WTTMIT 193
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG- 136
GH K L A FD+M R V SWNAML G+AQ G E +RLF +M G
Sbjct: 194 GH------AKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGN 247
Query: 137 IQAD---FVTVMG---------LTQAAI----------------------HAKHLSLLKS 162
+Q D + TV+ L+++ + HAK L++
Sbjct: 248 VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAK-CGNLEA 306
Query: 163 VHSFGIHIGVDADVSVC--NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
H +GV S N IS+YA+ DL A+ +F + +R VSWNSM+AG T
Sbjct: 307 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQR--DTVSWNSMIAGYT 364
Query: 221 YGDKFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ ++ + M+ + + D T+VS+ S+ L G S +
Sbjct: 365 QNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQIS 424
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+SV N+LI+MYS+CG + A ++F + R VS+ +ISG+A+ G E++ L M+
Sbjct: 425 ISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKE 484
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWF---------DNYACSGGLKDNVMVCNALIDM 389
G PD +T +++++ C +G L+ G+ D+YAC +IDM
Sbjct: 485 DGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHYAC-------------MIDM 531
Query: 390 YSKCGSIGDARELFYALP 407
+ G + +A +L ++P
Sbjct: 532 LGRAGRLEEAMKLIQSMP 549
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 185/576 (32%), Positives = 285/576 (49%), Gaps = 72/576 (12%)
Query: 79 HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
+I+ + +VK LD A +F++M ++ S+ M++G AQ + +F +MR G+
Sbjct: 122 NIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVI 181
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ VT+ + A H + + +H+ +G++A V + Y C L A ++
Sbjct: 182 PNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVL 241
Query: 199 FCGIEER-----------------------------LRTVVSWNSMVAGCTYGDKFDDSL 229
F I ER + VVSW +++ G ++ ++L
Sbjct: 242 FDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEAL 301
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
YR M+ G + +V L+S+ A+ +G+ H + GFD + T+I Y
Sbjct: 302 RMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFY 361
Query: 290 SKCGDI-------------------------------DSARVLFDGICDRTRVSWTAMIS 318
+ CG+I + AR LFD + +R SW++MIS
Sbjct: 362 AACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMIS 421
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY+Q D AL+LF M A G P+ +T++S+ S G L G+W Y S +
Sbjct: 422 GYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPL 481
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKI--VVSWTTMIAGCALNGEFVEALDLFHQ 436
N + ALIDMY+KCGSI A +LFY + +++ V W +I G A++G +L LF Q
Sbjct: 482 NDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQ 541
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS--YN--PELDHYSCMAD 492
L + ++PN +TF+ VL AC H G ++ G + KG+ YN P + HY CM D
Sbjct: 542 LQRVRIKPNSITFIGVLSACCHAGLVDTG------EKYFKGMKNLYNIEPNIKHYGCMID 595
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
LLGR G+LKEA + ++ MP+K+D IWGTLL AC+ H N+EIGE A L KL+ A
Sbjct: 596 LLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAG 655
Query: 553 YVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
V ++N YA GRWD +R M+ ++KK PG S
Sbjct: 656 RVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCS 691
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 228/520 (43%), Gaps = 100/520 (19%)
Query: 126 LRLFYNMRLVGIQADF-VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
LR F+N +D+ +T++ ++ LS + +HS G+ +++ V N+ IS
Sbjct: 36 LRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLIS 95
Query: 185 SYAKCDDLKMAELVF----------CGI-------------------EERLRTVVSWNSM 215
Y KC + A +F C I + ++ VS+ +M
Sbjct: 96 FYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTM 155
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
V G + + +++ ++ M + G + T+ S++S++ ++ R++H+ G
Sbjct: 156 VMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGL 215
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD-------- 327
+ V L+ MY C + +ARVLFD I +R V+W M++GY++ G +D
Sbjct: 216 EALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFER 275
Query: 328 -----------------------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
EALR++ +M G P+ V ++ +IS CG++ A+ G
Sbjct: 276 IPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEG 335
Query: 365 KWFDN--------------------YACSG-----------GLKDNVMVCNALIDMYSKC 393
+ F YA G G KD+V NALI + +
Sbjct: 336 QQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRN 395
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G I AR+LF +PE+ V SW++MI+G + N + AL LFH+++ ++PN +T ++V
Sbjct: 396 GMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVF 455
Query: 454 QACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD-FVQSMP 511
A G L +G WA I + I N L+ + + D+ + G + AL F +
Sbjct: 456 SAIATLGTLMEGRWAHEYILSNS--IPLNDNLN--AALIDMYAKCGSITIALQLFYEIQD 511
Query: 512 IKSDAGIWGTLLCACKI--HLNIEIGEYVAYCLFKLEPHS 549
S W ++C + H N+ + + +++P+S
Sbjct: 512 RVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNS 551
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 209/480 (43%), Gaps = 78/480 (16%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG----------HIVKSPFVK--- 87
+F+ M+ + PN +T + A + + ++ +M+H +IV + V
Sbjct: 171 VFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYC 230
Query: 88 -CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE----------------------- 123
C L A +FDE+ R+V +WN ML G+++ G ++
Sbjct: 231 VCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDG 290
Query: 124 --------NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
LR++ +M G+ + V ++ L A +S + H + G D
Sbjct: 291 YVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCY 350
Query: 176 VSVCNTWISSYAKCDDLKMAELVF--------------------CGIEERLRT------- 208
+ T I YA C ++ +A L F G+ E+ R
Sbjct: 351 DFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPE 410
Query: 209 --VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
V SW+SM++G + ++ D +L + M+ G + + T+VS+ S+ L++GR
Sbjct: 411 RDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWA 470
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR-TRVS-WTAMISGYAQKG 324
H + + L+ ++ LI MY+KCG I A LF I DR + VS W A+I G A G
Sbjct: 471 HEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHG 530
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVC 383
+ +L+LF ++ P+ +T + ++S C +G ++ G K+F ++ N+
Sbjct: 531 HANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHY 590
Query: 384 NALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+ID+ + G + +A E+ +P K VV W T++A C +G L +LD+
Sbjct: 591 GCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDI 650
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 144/358 (40%), Gaps = 49/358 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V + L ++R M + + PN + + AC + + Q HG IV
Sbjct: 284 WGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIV 343
Query: 82 K---------------------------------------------SPFVKCDRLDCAYK 96
+ S FV+ ++ A +
Sbjct: 344 RTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQ 403
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FDEM RDV SW++M+ G++Q + L+LF+ M G+Q + +T++ + A
Sbjct: 404 LFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGT 463
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + H + + + + ++ I YAKC + +A +F I++R+ +V WN+++
Sbjct: 464 LMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAII 523
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH--YG 274
G + SL + + + + T + +LS+ C LV + G+ Y
Sbjct: 524 CGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSA-CCHAGLVDTGEKYFKGMKNLYN 582
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALR 331
+ ++ +I + + G + A + + + V W +++ G+++ R
Sbjct: 583 IEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGER 640
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 283/561 (50%), Gaps = 38/561 (6%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A +F + + WN M+ G + L + +M G + + T + ++
Sbjct: 78 LSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKS 137
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER----- 205
+ K VH+ + +G++ + V + I+ YA+ +L A LVF R
Sbjct: 138 CTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSF 197
Query: 206 ------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+R VVSWN+M++G + ++++ F+ M
Sbjct: 198 TALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT 257
Query: 242 LDVTTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+V+T++S+LS+ + +Q G V S G ++ ++N LI MY KCGD++ A
Sbjct: 258 PNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASN 317
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LF+ I D+ VSW MI GY EAL LF M + P+ VT LS++ C GA
Sbjct: 318 LFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGA 377
Query: 361 LELGKWFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
L+LGKW Y +K+ V + +LIDMY+KCG + A+ +F + K + +W MI
Sbjct: 378 LDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMI 437
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDK 476
+G A++G AL LF ++ P+ +TF+ VL AC H G L G + S+IQ D
Sbjct: 438 SGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQ--DY 495
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
+S P+L HY CM DL GR G EA V++M +K D IW +LL AC+IH IE+ E
Sbjct: 496 KVS--PKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAE 553
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
VA LF+LEP + + YV ++N YA GRW+ VA IRT + N++KK PG S ++
Sbjct: 554 SVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVV 613
Query: 597 CTFTAEDRYHAESELTYPVLD 617
F D+ H +S Y +LD
Sbjct: 614 HEFLVGDKVHPQSNEIYKMLD 634
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 199/410 (48%), Gaps = 40/410 (9%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWIS--SYAKCDDLKMAELVFCGIEERLRTVVSW 212
K L LK +HS I G+ + I + + DL A +F I R V W
Sbjct: 39 KTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI--RNPNHVIW 96
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N M+ G + + +L +Y HM+ +G + T S+ S +G+ VH+H +
Sbjct: 97 NHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLK 156
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G + + V +LI+MY++ G++ +AR++FD R VS+TA+I+GYA KG LDEA L
Sbjct: 157 LGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEAREL 216
Query: 333 -------------------------------FFAMEAAGELPDLVTVLSMISGCGQSG-A 360
F M A P++ T+LS++S C QSG +
Sbjct: 217 FDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSS 276
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+LG W ++ GL N+ + N LIDMY KCG + +A LF + +K VVSW MI G
Sbjct: 277 LQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGG 336
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGIS 479
+ EAL LF ++M+ ++ PN VTFL++L AC + G L+ G W + + + K +
Sbjct: 337 YTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMK 396
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
L ++ + D+ + G L A M KS A W ++ +H
Sbjct: 397 NTVAL--WTSLIDMYAKCGDLAVAKRIFDCMNTKSLA-TWNAMISGFAMH 443
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 169/390 (43%), Gaps = 47/390 (12%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK------LSDLIYS- 73
WN+ I + + F +M++ + PN T + ACA+ L + + S
Sbjct: 227 SWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSW 286
Query: 74 ----------QMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
++++G I +VKC L+ A +F+++ ++V SWN M+ G+ M +
Sbjct: 287 IEDRGLGSNIRLVNGLI--DMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYK 344
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD-------V 176
L LF M I + VT + + A + L L K VH++ VD + V
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAY-----VDKNMKSMKNTV 399
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
++ + I YAKC DL +A+ +F + +++ +WN+M++G D +L + M
Sbjct: 400 ALWTSLIDMYAKCGDLAVAKRIFDCMNT--KSLATWNAMISGFAMHGHTDTALGLFSRMT 457
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDI 295
GF D T V +L++ L GR S I Y + +I ++ + G
Sbjct: 458 SEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLF 517
Query: 296 DSARVLFDGICDRTRVS-WTAMISG--YAQKGDLDEAL-RLFFAMEAAGELPDLVTVLSM 351
D A L + + + W +++ ++ +L E++ + F +E E P +LS
Sbjct: 518 DEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEP--ENPSAYVLLSN 575
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVM 381
I +GA G+W D L DN M
Sbjct: 576 I----YAGA---GRWEDVAKIRTRLNDNRM 598
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 131/302 (43%), Gaps = 42/302 (13%)
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARVLFDGI 305
++LLS+ + L Q +HS I G ++ LI S GD+ A LF I
Sbjct: 32 LTLLSNCKTLQTLKQ---IHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ V W MI G + AL + M ++G P+ T S+ C + GK
Sbjct: 89 RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSI----------------------------- 396
+ GL+ N V +LI+MY++ G +
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208
Query: 397 --GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ARELF +P + VVSW MI+G A +G EA+ F ++ + PN T L+VL
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268
Query: 455 ACTHTG-FLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
AC +G L+ G W S I+ D+G+ N L + + D+ + G L+EA + + +
Sbjct: 269 ACAQSGSSLQLGNWVRSWIE--DRGLGSNIRL--VNGLIDMYVKCGDLEEASNLFEKIQD 324
Query: 513 KS 514
K+
Sbjct: 325 KN 326
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + WN I + + + L LFR+M Q++I+PN++TF I ACA L L +
Sbjct: 323 QDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGK 382
Query: 75 MIHGHIVKSP----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+H ++ K+ + KC L A +IFD M + +A+WNAM+ GFA
Sbjct: 383 WVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAM 442
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
G + L LF M G D +T +G+ A HA LSL
Sbjct: 443 HGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSL 483
>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
Length = 709
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 295/601 (49%), Gaps = 52/601 (8%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS-----PFV---------KCDRLDCAY 95
+ PN T + +AC D ++M+HG++V PFV K + A
Sbjct: 134 VRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVASAR 193
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++ + RDV SW A++ G LE L +F M G+ + VT++ + QA
Sbjct: 194 RLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNNVTMLSVIQACALMG 253
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L VH+ + + ++ D SV N+ I YAK ++ A +F G + +V S +
Sbjct: 254 ASELFGPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIRLFKGFYLKTGSVCSNEDV 313
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+A YG S+ G +H+H I G
Sbjct: 314 LAAVLYGCTISGSVK-------------------------------NGEGLHAHTIKMGA 342
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+SV N+L+ MY++ ID+A ++F+G+ + VSW +IS A+ ++EA+ +F
Sbjct: 343 FPSISVENSLMGMYARFEQIDAALLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIFSV 402
Query: 336 MEAA---GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
+ AA G PD VTVLSM+ C +G L G+ Y G +V +CNALI MY+K
Sbjct: 403 LHAAAGGGLAPDFVTVLSMLQACSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAK 462
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRVTFLA 451
G I A +F + K +VSW +MI ++G+ AL +FHQL + PN +TF++
Sbjct: 463 LGRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVS 522
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
V+ AC+H+G + +G D GI P +DHY+C+ DLLGR G+ EA F++ MP
Sbjct: 523 VISACSHSGLVSEGHKCFESMGRDHGI--EPSMDHYACVVDLLGRSGRFAEAEQFIRDMP 580
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
++ D+ IWG LL AC++H N+++ E A L LEP S V ++N YA GRW A
Sbjct: 581 VRPDSTIWGPLLAACQLHGNVDLAEKAAKELSALEPESDIWRVSLSNTYASVGRWRDAAK 640
Query: 572 IRTMMKRNQVKKFPGQSLFHING-KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
IR+ M+R ++K G S + G + F + D H ++E Y V + H + A
Sbjct: 641 IRSEMRRVGLRKETGWSFVDVGGVEGFKFVSADTRHHDAEKIYSVWHSMNRHMADLAADV 700
Query: 631 H 631
H
Sbjct: 701 H 701
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 209/415 (50%), Gaps = 27/415 (6%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ W + + V + L +F M ++ + PNN+T + +ACA + +H
Sbjct: 204 VVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNNVTMLSVIQACALMGASELFGPVHA 263
Query: 79 HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF--YNMRLVG 136
+V L+ + D + N++++ +A+ GF+E +RLF + ++
Sbjct: 264 LVV--------LLELEH---------DASVVNSLIMMYAKNGFVEEAIRLFKGFYLKTGS 306
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
+ ++ + + + + + +H+ I +G +SV N+ + YA+ + + A
Sbjct: 307 VCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAAL 366
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY---NGFRLDVTTVVSLLSS 253
LVF G+E ++ +VSWN++++ D+ +++++ + + G D TV+S+L +
Sbjct: 367 LVFEGME--VKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQA 424
Query: 254 FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
L QG+++H + + GF DVS+ N LISMY+K G ID A ++F+ + + VSW
Sbjct: 425 CSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIKDLVSW 484
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELG-KWFDNYA 371
+MI+ Y GD ALR+F ++ AG P+ +T +S+IS C SG + G K F++
Sbjct: 485 NSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFESMG 544
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNG 425
G++ ++ ++D+ + G +A + +P + + W ++A C L+G
Sbjct: 545 RDHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVRPDSTIWGPLLAACQLHG 599
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 26/277 (9%)
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
++ N+L+ Y +CG + A L D + R ++ +IS + + G +ALR F M A
Sbjct: 62 LAAANSLLHAYLQCGLLSRALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRAFLDMLA 121
Query: 339 AG----------ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
G P+ T +++ CG + L + Y +GG D+ V +L++
Sbjct: 122 WGCSDEEGVDDVVRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVN 181
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+K G + AR L LP + VVSWT +++GC LN EAL +F ++E + PN VT
Sbjct: 182 MYAKVGDVASARRLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNNVT 241
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL----GRKGKLKEAL 504
L+V+QAC G E + + EL+H + + + L + G ++EA+
Sbjct: 242 MLSVIQACALMGASELFGPV-------HALVVLLELEHDASVVNSLIMMYAKNGFVEEAI 294
Query: 505 DFVQSMPIK-----SDAGIWGTLLCACKIHLNIEIGE 536
+ +K S+ + +L C I +++ GE
Sbjct: 295 RLFKGFYLKTGSVCSNEDVLAAVLYGCTISGSVKNGE 331
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 187/634 (29%), Positives = 315/634 (49%), Gaps = 23/634 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + TI+ WNS I + + ++L F M++ + + +T + AC
Sbjct: 409 FNNMQERDTIS-WNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQH 467
Query: 70 LIYSQMIHGHIVKSPFVK----CDRLDCAYK----------IFDEMAVRDVASWNAMLVG 115
L + + +HG I KS C+ L Y +F M RD+ SWN+M+
Sbjct: 468 LKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMAS 527
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ G + + L M ++VT T A +L LK VH+F IH V +
Sbjct: 528 HVEDGKYSHAILLLVEMLKTRKAMNYVT---FTTALSACYNLEKLKIVHAFVIHFAVHHN 584
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ + NT ++ Y K + A+ V C I R VV+WN+++ G + ++ + M
Sbjct: 585 LIIGNTLVTMYGKFGLMDEAQKV-CKIMPE-RDVVTWNALIGGHADDKDPNATIQAFNLM 642
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
G + T+V+LL + + P+ L++ G +H+H + GF+LD V ++LI+MY++CGD
Sbjct: 643 RREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGD 702
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
++++ +FD + ++ +W A+ S A G +EAL+ M G D + ++
Sbjct: 703 LNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALAT 762
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
G L+ G+ ++ G + + V NA +DMY KCG I D + + SW
Sbjct: 763 IGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSW 822
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+I+ A +G F +A + FH++++L L+P+ VTF+++L AC+H G +++G
Sbjct: 823 NILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTS 882
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+ G+ ++H C+ DLLGR G+L EA F+ MP+ + +W +LL ACK+H N+E+
Sbjct: 883 EFGVP--TAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLEL 940
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G A LF+L + YV +N A RW V N+R M+ +KK P S +
Sbjct: 941 GRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKN 1000
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K TF D++H +S Y L+ L +REE +
Sbjct: 1001 KVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGH 1034
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 234/494 (47%), Gaps = 14/494 (2%)
Query: 32 KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRL 91
+N ++ + F Q ++I N+ A C K D+I + + + + + K +
Sbjct: 142 RNHSNPQVSRFLQKGFSEISEGNVGKALHA-LCVK--DVIQQNTFYTNTLVNMYSKFGSI 198
Query: 92 DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
A +FD+M R+ ASWN M+ GF ++G+ ++ F +M G+ + + A
Sbjct: 199 KYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTAC 258
Query: 152 IHAKHLSL-LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ ++ + +H + + G+ ++V V + + Y + A +F IEE +V
Sbjct: 259 DRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEP--NIV 316
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW S++ + LN YRH+ +NG T+ +++ + G +
Sbjct: 317 SWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDV 376
Query: 271 IHYGFDLD-VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I G D VSV N+LISM+ ++ A +F+ + +R +SW ++I+ A G +E+
Sbjct: 377 IKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEES 436
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L FF M D +T+ +++ CG + L+ G+ GL+ NV VCN+L+ M
Sbjct: 437 LGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSM 496
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y++ GS DA +F+ +P + ++SW +M+A +G++ A+ L ++++ N VTF
Sbjct: 497 YAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTF 556
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
L AC + LEK + I+ + + L + + + G+ G + EA +
Sbjct: 557 TTALSACYN---LEK---LKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKI 610
Query: 510 MPIKSDAGIWGTLL 523
MP + D W L+
Sbjct: 611 MP-ERDVVTWNALI 623
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/530 (24%), Positives = 237/530 (44%), Gaps = 29/530 (5%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I W S + + + L ++R ++ N + T + + C D I
Sbjct: 314 NIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQIL 373
Query: 78 GHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
G ++KS F D ++ A ++F+ M RD SWN+++ A G
Sbjct: 374 GDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRF 433
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
E L F+ MR + D++T+ L A A+HL + +H G++++V VCN+
Sbjct: 434 EESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSL 493
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+S YA+ + AELVF + R ++SWNSM+A K+ ++ M+ +
Sbjct: 494 LSMYAQAGSSEDAELVFHTMPA--RDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAM 551
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T + LS+ E L ++VH+ IH+ ++ + NTL++MY K G +D A+ +
Sbjct: 552 NYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVC 608
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC-GQSGAL 361
+ +R V+W A+I G+A D + ++ F M G L + +T+++++ C L
Sbjct: 609 KIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLL 668
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ G + G + + V ++LI MY++CG + + +F L K +W + +
Sbjct: 669 KHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSAN 728
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A G EAL ++ + ++ +F L + L++G Q I
Sbjct: 729 AHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQ-----QLHSWIIKLG 783
Query: 482 PELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
ELD Y A D+ G+ G++ + + I+S W L+ A H
Sbjct: 784 FELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRS-WNILISALARH 832
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 217/459 (47%), Gaps = 21/459 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY-SQMIHGHI 80
WN+ I V HK + F M +N + P++ + AC + + ++ IHG++
Sbjct: 216 WNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYV 275
Query: 81 VK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + FV L A K+F+E+ ++ SW +++V +A G + VL
Sbjct: 276 VKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVL 335
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISS 185
++ ++R G+ T+ + + ++ + I G+D + VSV N+ IS
Sbjct: 336 NIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISM 395
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
+ D ++ A VF ++E R +SWNS++ + +F++SL + M + D
Sbjct: 396 FGNYDSVEEASRVFNNMQE--RDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYI 453
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+ +LL + + L GR +H G + +V V N+L+SMY++ G + A ++F +
Sbjct: 454 TISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTM 513
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R +SW +M++ + + G A+ L M + + VT + +S C LE K
Sbjct: 514 PARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLK 570
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ + N+++ N L+ MY K G + +A+++ +PE+ VV+W +I G A +
Sbjct: 571 IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDK 630
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ + F+ + L N +T + +L C +L K
Sbjct: 631 DPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLK 669
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/632 (30%), Positives = 313/632 (49%), Gaps = 24/632 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
S++ W + I + + LL+FR+M ++ N +T+ + + C L + +MI
Sbjct: 223 SSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMI 282
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
I++SPF +C LD A + + M RDV +WNAM+ AQ G
Sbjct: 283 DARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDN 342
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVCNT 181
+ L M + G A+ VT + + +A + + LS + +H+ + G+ +V+V N+
Sbjct: 343 WEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNS 402
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I+ Y KC + A VF + + VSWN+++ KF D+L + M G R
Sbjct: 403 VITMYGKCGQTEAAMSVFEAMPRK--DDVSWNAVINASVGNSKFQDALELFHGMELEGLR 460
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI-NTLISMYSKCGDIDSARV 300
+ T++SLL + E L R +H+ GF + + + N++++MY++CG + A+
Sbjct: 461 SNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKK 520
Query: 301 LFDGICDRTRVSWTAMISGYAQK--GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
FD + ++ V+W+ +++ YAQ G A + F MEA G P VT +S + C
Sbjct: 521 AFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAM 580
Query: 359 GALELGKWFDNYACSGGLKDNVMVC-NALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
LE G+ A + G + +V N +I+MY KCGS DA+ +F +PEK ++SW ++
Sbjct: 581 ATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSL 640
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I A NG +EAL +++ P+ T +++L +H G LE+G D G
Sbjct: 641 IVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHG 700
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI-KSDAGIWGTLLCACKIHLNIEIGE 536
+ P C+ DLL RKG L A + + + P ++D W TLL ACK + + + G
Sbjct: 701 L--EPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGI 758
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A +F+LEP + +V +AN YA GRW + IR MM+R VKK PG S ++G
Sbjct: 759 RCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSV 818
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F + + H + L+ L L RE Y
Sbjct: 819 HEFISGESKHPKIREICEDLEKLTLRMREAGY 850
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 211/436 (48%), Gaps = 17/436 (3%)
Query: 36 HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------- 86
+ L LF +M+ P+ + F ACA +L + + IH +V S
Sbjct: 40 REALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSL 99
Query: 87 -----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
KC + CA K+FD M +RDV SW AML +AQ G L M G++ +
Sbjct: 100 VNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQ 159
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
VT + + + L L + +H I+ G++ D + N + Y C + VF
Sbjct: 160 VTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSR 219
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ + +V+ W +M+AGC+ ++++ L +R M G + + T +S++ +A+
Sbjct: 220 MGQ--SSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVK 277
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+G ++ + + F + +LIS+Y +CG +D A+ L + + R V+W AM++ A
Sbjct: 278 EGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACA 337
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD-NYACSGGLKDNV 380
Q GD EA+ L M+ G + VT LS++ C AL G+ G L+ V
Sbjct: 338 QNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREV 397
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V N++I MY KCG A +F A+P K VSW +I N +F +AL+LFH +
Sbjct: 398 AVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELE 457
Query: 441 DLRPNRVTFLAVLQAC 456
LR N T L++L+AC
Sbjct: 458 GLRSNEFTLLSLLEAC 473
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 216/448 (48%), Gaps = 19/448 (4%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC R+ A +FD ++ ++V SW M+ ++Q G L LF M+ G + D V
Sbjct: 2 YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ A + L + +HS + G+ +++ + N+ ++ Y KC D+ AE VF G+
Sbjct: 62 VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM-- 119
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
LR VVSW +M+A + +L M G + + T V+++ L GR
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H I+ G + D + N L+ MY CG D + +F + + + WT MI+G +Q G
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+E L +F M+ G + VT +SM+ C A++ G+ D + ++
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+LI +Y +CG + A+ L + ++ VV+W M+ CA NG+ EA+ L ++
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI-------SIIQYDDKGISYNPELDHYSCMADLLGRK 497
N+VT+L+VL+AC + L +G I ++Q E+ + + + G+
Sbjct: 360 NKVTYLSVLEACANLEALSQGREIHARVLLCGLLQR---------EVAVGNSVITMYGKC 410
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCA 525
G+ + A+ ++MP K D W ++ A
Sbjct: 411 GQTEAAMSVFEAMPRKDDVS-WNAVINA 437
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 178/344 (51%), Gaps = 12/344 (3%)
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC + A +VF GI + V SW M+A + + ++L + M + G R D
Sbjct: 2 YGKCARVTDALMVFDGISAK--NVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKV 59
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
V L + L GR +HS + G ++ + N+L++MY KC D+ A +FDG+
Sbjct: 60 VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R VSWTAM++ YAQ G +AL M+A G P+ VT ++++ C + L+LG+
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ + GL+ + ++ NAL+ MY CGS D + +F + + V+ WTTMIAGC+ NG
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
++ E L +F ++ ++ N VT++++++ C + +++G I D I +P
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMI------DARILESPFCS 293
Query: 486 HY---SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + L G+ G L A ++ M + D W ++ AC
Sbjct: 294 STLLATSLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTAC 336
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 100/181 (55%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY KC + A ++FDGI + SWT M++ Y+Q G EAL LF M+ G PD V
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ + C SG L+ G+ + GL N+++ N+L++MY KC + A ++F +
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ VVSWT M+A A NG + +AL+ ++ ++PN+VTF+ ++ C L+ G
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 468 I 468
I
Sbjct: 181 I 181
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 182/619 (29%), Positives = 305/619 (49%), Gaps = 24/619 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S IR + HK+L F M + + P++ FP + KACA L DL + +HG+I+
Sbjct: 76 WKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYII 135
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAML--VGFAQMGFLENVLRLFYNMRLVGIQA 139
R+ + ++ A+ ++ S L G ++G + + + R V +
Sbjct: 136 --------RVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTAS 187
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-GVD-------ADVSVCN--TWISSYAKC 189
V G + I A + + F + +D ++ CN I +
Sbjct: 188 VLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHS 247
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
+ +F + E+ +VSWN+++AG + ++L R M + D T+ S
Sbjct: 248 MSVDSVRKIFEMMPEK--DLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSS 305
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
+L + +G+ +H I G D +V V ++LI MY+KC + + +F + +R
Sbjct: 306 VLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERD 365
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
+SW ++I+G Q G DE L+ F M A P + S++ C L LGK
Sbjct: 366 GISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 425
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
Y G +N+ + ++L+DMY+KCG+I AR++F + + +VSWT MI GCAL+G ++
Sbjct: 426 YITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALD 485
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
A++LF Q+ + PN V F+AVL AC+H G +++ W D GI+ P ++HY+
Sbjct: 486 AIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIA--PGVEHYAA 543
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
++DLLGR G+L+EA DF+ MPI +W TLL AC++H N+++ E VA + +++P +
Sbjct: 544 VSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKN 603
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAES 609
Y+ +AN Y+ RW A R ++R ++K P S + K F A D H
Sbjct: 604 TGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCY 663
Query: 610 ELTYPVLDCLALHSREEAY 628
E ++ L +E Y
Sbjct: 664 EKIREAMEVLMELMEKEGY 682
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
DS R LF+ + ++W ++I Y G ++L F M A+G PD S++ C
Sbjct: 60 DSLR-LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKAC 118
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
L LG+ Y GL ++ NAL++MYSK
Sbjct: 119 AMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSK 155
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 299/621 (48%), Gaps = 58/621 (9%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDL--------------IYSQMIHGHIVKSPFV 86
+F +M + P+ F + A L DL ++ G + + +
Sbjct: 348 VFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYT 407
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
+ LD A F+ M R+ SW M+ FAQ G L++ ++L+ + + +
Sbjct: 408 RNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTA 467
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
Q K + + ++ +V N I+ Y + LK A+ +F + +
Sbjct: 468 YAQVGRIQKARLIFDEI--------LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMP--V 517
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ SW +M+AG ++ ++L + +G ++ S LS+ + GR++
Sbjct: 518 KNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVI 577
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDI------------------------------- 295
HS I G + V+N LISMY+KCG++
Sbjct: 578 HSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYML 637
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
D ARV+F+ + R VSWTA+IS Y Q G + AL LF M A G P+ +TV S++S C
Sbjct: 638 DDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSAC 697
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
G GA++LG+ F G + V N+LI MY KCG D +F +PE +++W
Sbjct: 698 GNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWN 756
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
++ GCA NG EA+ +F Q+ + P++++FL VL AC+H G +++GWA
Sbjct: 757 AVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQK 816
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
GI P + HY+CM DLLGR G L EA +++MP+K D+ IW LL AC+IH N+E+G
Sbjct: 817 YGIM--PLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELG 874
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
+ VA LF++ +A YV ++N +A G WD VA IR +MK + K PG S + K
Sbjct: 875 QRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNK 934
Query: 596 TCTFTAEDRYHAESELTYPVL 616
F DR H + E Y L
Sbjct: 935 LHCFVTGDRTHDQIEEIYSAL 955
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 216/488 (44%), Gaps = 53/488 (10%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
I W + + + +F M ++N + N + ++ K + ++ +M
Sbjct: 232 NIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMP 291
Query: 77 HGHI-----VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
++ V + + C R+ A ++FD+M R+ SW M+ G+ + +F
Sbjct: 292 EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVK 351
Query: 132 M-RLVGI--QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
M R V Q+ FV V+ A L L+ S+ I G + DV V + +++Y +
Sbjct: 352 MCRTVARPDQSIFVVVLS---AITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTR 408
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
L +A F + ER SW +M+A + DD++ Y + V T
Sbjct: 409 NGSLDLAMHFFETMPER--NEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ----TVATKT 462
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
++++++ + + RL+ + + +V N +I+ Y++ G + A+ LF + +
Sbjct: 463 AMMTAYAQVGRIQKARLIFDEIL----NPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK 518
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
SW AMI+G+ Q + EAL L + +G +P + S +S C G +E+G+
Sbjct: 519 NSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIH 578
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSI-------------------------------G 397
+ A G + N V N LI MY+KCG++
Sbjct: 579 SLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLD 638
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
DAR +F +P++ VVSWT +I+ G ALDLF ++ ++PN++T ++L AC
Sbjct: 639 DARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACG 698
Query: 458 HTGFLEKG 465
+ G ++ G
Sbjct: 699 NLGAIKLG 706
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 208/455 (45%), Gaps = 57/455 (12%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKACAKLSDLIYSQMIHGH 79
Q N++I+E + +F +M Q D+ N++ + + L++ + +
Sbjct: 173 QCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKN 232
Query: 80 I-----VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL 134
I + + + K R++ A ++F+ M R+V SWNAM+ G+ Q G L+N +LF M
Sbjct: 233 IRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMP- 291
Query: 135 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
+ +V+ N+ ++ Y C +
Sbjct: 292 --------------------------------------EKNVASWNSVVTGYCHCYRMSE 313
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
A +F + ER VSW M++G + + ++ + + M R D + V +LS+
Sbjct: 314 ARELFDQMPER--NSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI 371
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
+ L + I G++ DV V + +++ Y++ G +D A F+ + +R SWT
Sbjct: 372 TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWT 431
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACS 373
MI+ +AQ G LD+A++L+ E E + T +M++ Q G ++ + FD
Sbjct: 432 TMIAAFAQCGRLDDAIQLY---ERVPE-QTVATKTAMMTAYAQVGRIQKARLIFDEI--- 484
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
L NV+ NA+I Y++ G + +A++LF +P K SW MIAG N E EAL+L
Sbjct: 485 --LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALEL 542
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+L P+ +F + L AC + G +E G I
Sbjct: 543 LIELHRSGSVPSDSSFTSALSACANIGDVEIGRVI 577
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V L LF M I+PN LT + AC L + + H I
Sbjct: 655 WTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIF 714
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + KC D + +F+EM D+ +WNA+LVG AQ G + ++
Sbjct: 715 KLGFDTFLFVGNSLITMYFKCGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIK 773
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
+F M + GI D ++ +G+ A HA
Sbjct: 774 IFEQMEVEGILPDQMSFLGVLCACSHA 800
>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 290/586 (49%), Gaps = 28/586 (4%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL + + WN+ I +H LF +M++ + +P T + +C
Sbjct: 119 RLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQ 178
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ + IHG VK S + KC LD +F E+ + V SWN M+
Sbjct: 179 LFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIG 238
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
F Q G + +F M + A+ VT++ + A + +H + IG+
Sbjct: 239 AFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTG------CIHCYATKIGLVE 292
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD--DSLNFY 232
+VSV + + SY KC +++AEL++ + + + +V+ ++++ Y +K D + Y
Sbjct: 293 NVSVVTSLVCSYVKCGYIELAELIY--MSKLKKNLVALTAIIS--HYAEKGDMGSVVRLY 348
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
+ + +LD +V ++ F P+ + G H +G+ G +D V N ISMYSK
Sbjct: 349 SIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKF 408
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
+ID+ LF + +T SW ++IS AQ G +A+ LF M +G PD +T+ S++
Sbjct: 409 DNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLL 468
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S C Q+G L G+ Y L V AL+DMY KCG + A +F ++ E +
Sbjct: 469 SACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLA 528
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SW ++I+G L G AL + ++ME ++PN++TF +L ACTH G +E+G I
Sbjct: 529 SWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIM 588
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
GI PE H + M +LGR G +EA+ F+Q+M D+ +WG LL AC IH +
Sbjct: 589 KKKFGIV--PESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEV 646
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
++GE VA LF + +V M+N YA RW+ VA IR MM+
Sbjct: 647 KLGESVAKKLFFSNCSNGGFFVLMSNLYAASRRWNDVARIRKMMRE 692
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/551 (26%), Positives = 252/551 (45%), Gaps = 59/551 (10%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKA--------------CAKLSDLIYSQMIHGHIVKSP 84
LLLFR++ ++ ++PN+ TF + KA C++ ++ + + H +K
Sbjct: 35 LLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSE-NEKAEANQLQTHFIKWG 93
Query: 85 F--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
F K + A ++FD+ +DV SWNA++ G+ + G + +LF
Sbjct: 94 FDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFV 153
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
MR T++ L + + KS+H G+ G+D D V N +S Y KC
Sbjct: 154 EMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCA 213
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
DL +L+F I E ++VVSWN+M+ F +++ ++ M+ + T+VS+
Sbjct: 214 DLDGVKLLFGEITE--KSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSI 271
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
LS A +H + G +VSV+ +L+ Y KCG I+ A +++ +
Sbjct: 272 LS------ANANTGCIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNL 325
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
V+ TA+IS YA+KGD+ +RL+ ++ D V ++ +I G + +G F Y
Sbjct: 326 VALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGY 385
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
GL + +V N I MYSK +I LF + +K + SW ++I+ CA G ++A
Sbjct: 386 GVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDA 445
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--S 488
+ LF Q+ P+ +T ++L AC G L G + + N +L+ + +
Sbjct: 446 MALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRN-----NLDLEGFVGT 500
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPH 548
+ D+ + G++ A + +SM A W +L+ Y LF H
Sbjct: 501 ALVDMYVKCGRMDFAENVFKSMKEPCLAS-WNSLIS--------------GYGLFGFHNH 545
Query: 549 SAAPYVEMANK 559
+ Y EM K
Sbjct: 546 ALLCYTEMMEK 556
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 283/570 (49%), Gaps = 24/570 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I + + LF M + + +PN T + +C + + IHG +
Sbjct: 125 WNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGI 184
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F KCD L+ + +FDEM + V SWN M+ + Q G + +
Sbjct: 185 KAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAIL 244
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M G VT+M L A + ++VH + + G D SV + + YA
Sbjct: 245 YFKEMLKEGFHPSSVTIMNLVSAN------AFPENVHCYVVKCGFTNDASVVTSLVCLYA 298
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K A+ ++ + +++ ++++ + + ++ + + + D +
Sbjct: 299 KQGFTNTAKQLY--KYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVAL 356
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ +L P G H +G+ G D V N LIS+YS+ +I++A LF + +
Sbjct: 357 IGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMRE 416
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++W +MISG Q G +A+ LF M G+ PD +T+ S++SGC Q G L +G+
Sbjct: 417 KPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETL 476
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+Y ++ + ALIDMYSKCG + A ++FY + + + +W +I+G +L G
Sbjct: 477 HSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLE 536
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
A + +L E L+P+++TFL VL ACTH G + G I + G+ P L HY
Sbjct: 537 HTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLM--PSLQHY 594
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ LLG++G KEA++F+ M I+ D+ +WG LL AC I +++GE +A LF L
Sbjct: 595 ACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNH 654
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMK 577
+ YV M+N YA+ GRWD VA +R MMK
Sbjct: 655 KNGGFYVLMSNLYAIVGRWDDVARVREMMK 684
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 241/465 (51%), Gaps = 30/465 (6%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA---------CAKLSDLI-- 71
N + ++ +N L++FRQ+ Q ++ PN TF + KA C + L
Sbjct: 17 NLSLFHSLFQNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQAR 76
Query: 72 ----------YSQMIHGHI-VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+Q IH H + ++K A +FD+M+ RDV SWN ++ G++Q G
Sbjct: 77 QIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNG 136
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+L + ++LF +M + + T++ L + + + +S+H FGI G D + N
Sbjct: 137 YLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNN 196
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+S YAKCDDL+ ++L+F ++E ++VVSWN+M+ FD ++ +++ M+ GF
Sbjct: 197 ALMSMYAKCDDLEASQLLFDEMDE--KSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGF 254
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
T+++L+S+ PE VH + + GF D SV+ +L+ +Y+K G ++A+
Sbjct: 255 HPSSVTIMNLVSANAFPEN------VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQ 308
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
L+ + ++ TA+IS Y++KGD++ A+ F PD V ++ ++ G
Sbjct: 309 LYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSH 368
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+G F Y GL ++ +V N LI +YS+ I A LFY + EK +++W +MI+G
Sbjct: 369 FAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISG 428
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
C G+ +A++LF ++ +P+ +T ++L C G L G
Sbjct: 429 CVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIG 473
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 16/259 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+L + Y + + + I K + + F Q Q DI+P+ + + S
Sbjct: 308 QLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPS 367
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
HG+ VKS + + D ++ A +F +M + + +WN+M+
Sbjct: 368 HFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMIS 427
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G Q G + + LF M + G + D +T+ L +L + +++HS+ + V
Sbjct: 428 GCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRV 487
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ + I Y+KC L AE VF I++ + +WN++++G + + Y
Sbjct: 488 EDFIGTALIDMYSKCGRLDYAEKVFYNIKD--PCLATWNAIISGYSLYGLEHTAFGCYSK 545
Query: 235 MMYNGFRLDVTTVVSLLSS 253
+ G + D T + +L++
Sbjct: 546 LQEQGLKPDKITFLGVLAA 564
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 197/611 (32%), Positives = 298/611 (48%), Gaps = 19/611 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + + L L+ +M + P+ TFP + ++C + D + +H H+
Sbjct: 162 SWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHV 221
Query: 81 VKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
++ F KC + A K+FD MAV D SWNAM+ G + G L
Sbjct: 222 LRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGL 281
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M +Q + +T+ +T A+ ++ K +H + G DV+ CN+ I Y
Sbjct: 282 ELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMY 341
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A + A VF ++ R +SW +M++G D +L Y M N D T
Sbjct: 342 ASLGMMGQARTVFSRMDTR--DAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDIT 399
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S L++ C +L G +H GF V V N L+ MY+K ID A +F +
Sbjct: 400 IASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMP 459
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ VSW++MI+G+ EAL F M A + P+ VT ++ ++ C +GAL GK
Sbjct: 460 EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVK-PNSVTFIAALAACAATGALRSGKE 518
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G+ + NALID+Y KCG G A F A K VVSW MIAG +G
Sbjct: 519 IHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGN 578
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL F+Q++++ P+ VTF+A+L AC+ G + +GW + D I P L H
Sbjct: 579 GETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIV--PNLKH 636
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM DLL R G+L EA +F+ MPI DA +WG LL C+IH ++E+GE A + +LE
Sbjct: 637 YACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELE 696
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+ A +V + + YA G WD +A +R M+ + G S + G F +D H
Sbjct: 697 PNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESH 756
Query: 607 AESELTYPVLD 617
+ VL+
Sbjct: 757 PQIREINTVLE 767
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 205/390 (52%), Gaps = 4/390 (1%)
Query: 62 KACAKLSDL-IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ACA D + + G+ + S V+ A+++F +M RDV SWN M+ G+ + G
Sbjct: 115 RACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAG 174
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
LE L L++ M G++ D T + ++ + + VH+ + G +V V N
Sbjct: 175 LLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLN 234
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ YAKC D+ A VF + + +SWN+M+AG + + L + M+ +
Sbjct: 235 ALMTMYAKCGDVVAARKVFDSMA--VMDCISWNAMIAGHFENGECNAGLELFLTMLQDEV 292
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ ++ T+ S+ + + + +H + GF DV+ N+LI MY+ G + AR
Sbjct: 293 QPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQART 352
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F + R +SWTAMISGY + G D+AL ++ ME PD +T+ S ++ C G+
Sbjct: 353 VFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGS 412
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L++G A S G V+V NAL++MY+K I A E+F +PEK VVSW++MIAG
Sbjct: 413 LDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAG 472
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFL 450
N EAL F ++ D++PN VTF+
Sbjct: 473 FCFNHRNFEALYYFRHMLA-DVKPNSVTFI 501
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 194/386 (50%), Gaps = 17/386 (4%)
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
FG+ +G N +S + + A VF + ER V SWN MV G
Sbjct: 127 FGLRLG--------NAMLSMLVRFGETWHAWRVFAKMPER--DVFSWNVMVGGYGKAGLL 176
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
+++L+ Y MM+ G R DV T +L S GR VH+H + +GF +V V+N L
Sbjct: 177 EEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNAL 236
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
++MY+KCGD+ +AR +FD + +SW AMI+G+ + G+ + L LF M P+L
Sbjct: 237 MTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNL 296
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T+ S+ G + K A G +V CN+LI MY+ G +G AR +F
Sbjct: 297 MTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSR 356
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLEK 464
+ + +SWT MI+G NG +AL+++ LME+ ++ P+ +T + L AC G L+
Sbjct: 357 MDTRDAMSWTAMISGYEKNGFPDKALEVY-ALMEVNNVSPDDITIASALAACACLGSLDV 415
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G + + +SY + + + ++ + ++ +A++ + MP K D W +++
Sbjct: 416 GVKLHELAESKGFMSY---VVVTNALLEMYAKSKRIDKAIEVFKCMPEK-DVVSWSSMIA 471
Query: 525 A-CKIHLNIEIGEYVAYCLFKLEPHS 549
C H N E Y + L ++P+S
Sbjct: 472 GFCFNHRNFEALYYFRHMLADVKPNS 497
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 282/554 (50%), Gaps = 5/554 (0%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI-QADF 141
S + +C L A K+FD M ++D SWN+ + G G +E R+F + GI Q D
Sbjct: 97 SMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQ 156
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T+ + A + + K +HS G + +++V N I+SY +C VF
Sbjct: 157 ATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDE 216
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ E+ VV+W ++++G + G +++SL + M + T +S L + +A+
Sbjct: 217 MSEK--NVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIR 274
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+GR +H G D+ + + L+ MYSKCG ++ A +F+ + VS T ++ G A
Sbjct: 275 EGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLA 334
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q G +E++++F M G + D + +++ G +L LGK + N
Sbjct: 335 QNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYF 394
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N LI+MYSKCG + D+ ++F +P++ VSW +MIA A +G AL L+ ++
Sbjct: 395 VNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEG 454
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+ P VTFL++L AC H G +EKG D GI P ++HY+C+ D++GR G L
Sbjct: 455 VWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGI--GPRMEHYACVVDMMGRAGLLN 512
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
EA F++ +P K +W LL AC IH N E+G+Y A LF P S APY+ +AN Y+
Sbjct: 513 EAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYS 572
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
G+W A MK V K G S I + +F EDR H +E+ Y VL L
Sbjct: 573 SEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELFK 632
Query: 622 HSREEAYSSHLKWI 635
+E Y ++I
Sbjct: 633 LMMDEGYVPDKRFI 646
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 18/320 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I ++L LF +M+ ++PN+LT+ AC+ L + + IHG +
Sbjct: 225 WTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVW 284
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC L+ A+KIF+ D S +LVG AQ GF E ++
Sbjct: 285 KLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQ 344
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M G+ D + + L+L K +HS I ++ V N I+ Y+
Sbjct: 345 VFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYS 404
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL + +FC + + R VSWNSM+A +L Y M G T
Sbjct: 405 KCGDLDDSIKIFCWMPQ--RNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTF 462
Query: 248 VSLLSSFVCPEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+SLL + + +G + S YG + ++ M + G ++ A+ + +
Sbjct: 463 LSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLP 522
Query: 307 DRTRV-SWTAMISGYAQKGD 325
++ + W A++ + G+
Sbjct: 523 EKPGILVWQALLGACSIHGN 542
>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 804
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 175/561 (31%), Positives = 286/561 (50%), Gaps = 18/561 (3%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCA---------- 94
M + PN++T + +A + L ++I G ++K F + A
Sbjct: 1 MLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYDM 60
Query: 95 ---YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
+KIF++ ++D+ W+AM+ + G +F M+ G++ + V+++ + A
Sbjct: 61 GIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPAC 120
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+ L K +H F I +V N+ + YAKC + K + LVF I E+ ++S
Sbjct: 121 ANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEK--DLIS 178
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
W +++ GC D ++ + M ++ F D T V L+ + + + G H +
Sbjct: 179 WTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLL 238
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
G VS+ L+ MY+K G+++SA ++FD + + +SW+AMIS +A AL
Sbjct: 239 KNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALE 298
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
F M++ E P+ +T +S++ C GA ELG+ +A G N + +ALID+Y
Sbjct: 299 TFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYC 358
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
K G I R +F +P K +V W++MI G LNG EAL+ F ++ ++PN V F++
Sbjct: 359 KFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFIS 418
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
VL AC+H G +GW+ GI P+L HY+CM DL+ R+G ++ AL FV MP
Sbjct: 419 VLSACSHCGLEHEGWSCFSSMEQKYGII--PKLPHYACMVDLISRRGNIEGALQFVNKMP 476
Query: 512 IKSDAGIWGTLLCACK-IHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
++ D IWG LL C+ H +IEI E VA L L+P + + YV ++N YA GRW V
Sbjct: 477 MEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVE 536
Query: 571 NIRTMMKRNQVKKFPGQSLFH 591
+R ++ +KK G H
Sbjct: 537 RLRKLVDEKGLKKEMGYKPLH 557
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 208/462 (45%), Gaps = 24/462 (5%)
Query: 12 RIYRSSTINQ---WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+I+ + I W++ + V + + +FR M+ + +EPN+++ I ACA +
Sbjct: 65 KIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVG 124
Query: 69 DLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
L++ + IHG +K F KC + +FD++ +D+ SW ++
Sbjct: 125 ALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIR 184
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G + + F M+ AD V L A I A + H F + G+ A
Sbjct: 185 GCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLA 244
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
VS+ + YAK +L+ A +VF + + + +SW++M++ + ++L ++
Sbjct: 245 FVSIGTALLQMYAKFGELESAIIVFDQLNK--KDYISWSAMISVHAHSRHPYNALETFKQ 302
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M R + T VSLL + A G + +H G+ + + + LI +Y K G
Sbjct: 303 MQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGR 362
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
I+ R +F+ I + V W++MI+GY G DEAL F M A G P+ V +S++S
Sbjct: 363 INQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSA 422
Query: 355 CGQSGALELGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIV 411
C G LE W F + G+ + ++D+ S+ G+I A + +P E
Sbjct: 423 CSHCG-LEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDK 481
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
W ++AGC +E +L + + + L P ++ +L
Sbjct: 482 RIWGALLAGCRSTHGSIEIAELVAERL-IGLDPQNTSYYVIL 522
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 315/611 (51%), Gaps = 30/611 (4%)
Query: 22 WNSQIREAVNKN----EAHKTLLLFRQMKQ--NDIEPNNLTFPFIAKACAKLSDLIYSQM 75
WNS IR ++N EA++ FR + + + + P+ T + C+ ++ +
Sbjct: 279 WNSLIR-GFSENGFWLEAYRA---FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMV 334
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IHG VK V KC L A +F ++ + V SWN+M+ +++ GF
Sbjct: 335 IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394
Query: 122 LENVLRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ L M + ++ + VT++ L A + L L+++H + + +
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N +I++YAKC L AE VF G+ + +V SWN+++ G +L+FY M G
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTK--SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG 512
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D ++VSLL + L G+ +H + G +++ V +L+S+Y C R
Sbjct: 513 ILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGR 572
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F+ + D+ V W AM+SGY+Q +EAL LF M + G PD + + S++ C Q
Sbjct: 573 TYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLS 632
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL LGK +A L ++ V +L+DMY+K G +G ++ +F L K V SW MI
Sbjct: 633 ALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G ++G+ +A++LF + D +P+R TFL VLQAC H G + +G ++ +
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEG--LNYLAQMQTLYK 750
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
PEL+HY+C+ D+LGR G+L EAL+F+ MP + DA IW +LL + ++++E+GE A
Sbjct: 751 LEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFA 810
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L LE + A Y+ ++N YA G+WD V +R MK ++K G S + GK +F
Sbjct: 811 EKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSF 870
Query: 600 TAEDRYHAESE 610
A + + S+
Sbjct: 871 IAGENSNPSSD 881
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 228/464 (49%), Gaps = 21/464 (4%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
QWN+ + V + + F ++ + +P+N TFP + KAC D+ + +HG
Sbjct: 176 QWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGM 235
Query: 80 IVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
VK + KC LD A ++FD+M +++ SWN+++ GF++ GF
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 295
Query: 126 LRLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
R F ++ G+ D T++ L ++ + +H + +G+ ++ VCN I
Sbjct: 296 YRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALI 355
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC L A ++F IE ++VVSWNSM+ + ++ + R M ++
Sbjct: 356 DMYSKCGCLSEAAILFRKIEN--KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELME 413
Query: 244 VT--TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
V T+++LL + + L+ R +H + + + F + N I+ Y+KCG + A +
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F G+ ++ SW A+I G+AQ GD +AL +F M G LPD +++S++ CG+ G L
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ GK + GL+ N V +L+ +Y C R F + +K V W M++G
Sbjct: 534 QYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGY 593
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ N EAL LF Q++ L P+ + ++L AC+ L G
Sbjct: 594 SQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG 637
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 7/377 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAK 155
+FD + +++ WNA++ G+ + + + F + + Q D T L +A
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ L KSVH + +G+ D+ V N I+ Y KC L A +F + E + ++SWNS+
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPE--QNLISWNSL 282
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRL--DVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+ G + + ++ +R ++ +G L DV T+V+LL + G ++H +
Sbjct: 283 IRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKL 342
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G ++ V N LI MYSKCG + A +LF I +++ VSW +MI Y+++G + E L
Sbjct: 343 GLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLL 402
Query: 334 FAMEAAGELPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
M EL ++ VT+L+++ C + L + Y+ + ++ NA I Y+
Sbjct: 403 RKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYA 462
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCGS+ A +F+ + K V SW +I G A NG+ ++ALD + ++ L + P+ + ++
Sbjct: 463 KCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVS 522
Query: 452 VLQACTHTGFLEKGWAI 468
+L AC G L+ G I
Sbjct: 523 LLLACGRLGLLQYGKEI 539
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 157/287 (54%), Gaps = 12/287 (4%)
Query: 178 VCNT-WISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
V NT I+ Y+ C + LVF +RL + + WN++V+G + +D++++ +
Sbjct: 144 VLNTRLITMYSICGYPLESRLVF----DRLLNKNLFQWNALVSGYVRNELYDEAIHTFLE 199
Query: 235 MM-YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
++ F+ D T L+ + + G+ VH + G +D+ V N +I++Y KCG
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCG 259
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSM 351
+D A LFD + ++ +SW ++I G+++ G EA R F ++ +G+ +PD+ T++++
Sbjct: 260 FLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTL 319
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C G +++G A GL +MVCNALIDMYSKCG + +A LF + K V
Sbjct: 320 LPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV 379
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQL-MELDL-RPNRVTFLAVLQAC 456
VSW +MI + G E DL ++ ME +L N VT L +L AC
Sbjct: 380 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPAC 426
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 281 VINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V+NT LI+MYS CG +R++FD + ++ W A++SGY + DEA+ F + +
Sbjct: 144 VLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISV 203
Query: 340 GEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
E PD T +I C + LGK A GL ++ V NA+I +Y KCG + +
Sbjct: 204 TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDE 263
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNRVTFLAVLQAC 456
A ELF +PE+ ++SW ++I G + NG ++EA F L+E L P+ T + +L C
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVC 323
Query: 457 THTGFLEKGWAI 468
+ G ++ G I
Sbjct: 324 SGEGNVDVGMVI 335
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 23/301 (7%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ +++ WN+ I + K L + +M + I P++ + + AC +L L Y +
Sbjct: 479 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IHG +++ S + C + F+ M ++ WNAML G++Q
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 598
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L LF M G++ D + + + A L L K VH F + + D V +
Sbjct: 599 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 658
Query: 182 WISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ YAK L ++ +F RL + V SWN M+ G + + ++ + M +
Sbjct: 659 LMDMYAKSGFLGHSQRIF----NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSD 714
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDS 297
+ D T + +L + C LV L + + Y + ++ +I M + G ++
Sbjct: 715 KQPDRFTFLGVLQA-CCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNE 773
Query: 298 A 298
A
Sbjct: 774 A 774
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 309 TRVSWTAMISGYAQKGDLDEALRLF---FAMEAAGELPDLVTVLSMI-SGCGQSGALELG 364
+++S IS + GDL+ AL + A +L + M+ CGQ +E+G
Sbjct: 67 SQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIG 126
Query: 365 KWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
+ D C S + ++ LI MYS CG ++R +F L K + W +++G
Sbjct: 127 RKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVR 186
Query: 424 NGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACT-----HTGFLEKGWAISIIQYDDKG 477
N + EA+ F +L+ + + +P+ TF +++ACT H G G A+ + D
Sbjct: 187 NELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLF 246
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + M L G+ G L EA++ MP + + W +L+
Sbjct: 247 VG--------NAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLI 283
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 268/543 (49%), Gaps = 42/543 (7%)
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQA-DFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
N +L ++ F E + L++N+R + A D + L +A + +H
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVF---CGIEERLRTVVSWNSMVAGCTYGDKF 225
+G D + I+ YA C + A L+F C + V+WN ++ G +
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPD-----AVAWNMIIDGYCQNGHY 203
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
DD+L + M + + D + ++LS+ L GR +H G+ +D + L
Sbjct: 204 DDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTAL 263
Query: 286 ISMYSKCGDIDSARVLFDGIC-------------------------------DRTRVSWT 314
I+MY+ CG +D AR ++DG+ +R V W+
Sbjct: 264 INMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWS 323
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
AMISGYA+ EAL+LF M +PD +T+LS+IS C GAL W Y
Sbjct: 324 AMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRS 383
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G + V NALIDMY+KCG++ ARE+F +P K V+SW++MI A++G A+ LF
Sbjct: 384 GFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLF 443
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++ E+++ PN VTF+ VL AC H G +E+G + ++ GIS P +HY CM DL
Sbjct: 444 RRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGIS--PTREHYGCMVDLY 501
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
R L++A++ +++MP + IWG+L+ AC++H E+GE+ A L +LEP V
Sbjct: 502 CRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALV 561
Query: 555 EMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYP 614
++N YA RW+ V IR M + K S IN + F DRYH +S+ Y
Sbjct: 562 VLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYE 621
Query: 615 VLD 617
LD
Sbjct: 622 KLD 624
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 223/477 (46%), Gaps = 48/477 (10%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
N +R + KT+ L+ ++ N + +FP + KA +K+S + IHG
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 79 --HIVKSPFVK---------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
V PF++ C R+ A +FD+M D +WN ++ G+ Q G ++ LR
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +MR ++ D V + + A HA +LS +++H F G D + I+ YA
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 188 KCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVAG 218
C + +A ++ G+ + R +V W++M++G
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
D+ ++L + M+ D T++S++S+ AL Q +H++ GF
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA 388
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+SV N LI MY+KCG++ AR +F+ + + +SW++MI+ +A G+ D A++LF M+
Sbjct: 389 LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKE 448
Query: 339 AGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
P+ VT + ++ CG +G +E G K F + G+ ++D+Y + +
Sbjct: 449 VNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLR 508
Query: 398 DARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
A EL +P V+ W ++++ C ++GE L F L+L P+ L VL
Sbjct: 509 KAIELIETMPFAPNVIIWGSLMSACQVHGE--AELGEFAAKRLLELEPDHDGALVVL 563
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 150/390 (38%), Gaps = 80/390 (20%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WN I L LF M+ +D++P+++ + AC +L Y + IH
Sbjct: 190 WNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVK 249
Query: 78 --GHIVKSP--------FVKCDRLDCAYK------------------------------- 96
G+ + S + C +D A K
Sbjct: 250 DNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARF 309
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
IFD+M RD+ W+AM+ G+A+ + L+LF M D +T++ + A H
Sbjct: 310 IFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGA 369
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L+ +H++ G +SV N I YAKC +L A VF + + V+SW+SM+
Sbjct: 370 LAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPR--KNVISWSSMI 427
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
D ++ +R M + T + +L + C H+ + G
Sbjct: 428 NAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVL--YACG---------HAGLVEEGEK 476
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
L S+IN GI TR + M+ Y + L +A+ L M
Sbjct: 477 LFSSMINE------------------HGISP-TREHYGCMVDLYCRANFLRKAIELIETM 517
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKW 366
A P+++ S++S C G ELG++
Sbjct: 518 PFA---PNVIIWGSLMSACQVHGEAELGEF 544
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 179/526 (34%), Positives = 266/526 (50%), Gaps = 28/526 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I + L + QM Q+ + P+ TF I KAC+ L D+ + +H H++
Sbjct: 132 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F K + + A +F MA RD+ SW +M+ GF+Q+G+ L
Sbjct: 192 KSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 251
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-----KSVHSFGIHIGVDADVSVCNTW 182
F M G+ + G +A SLL + +H I G+ DV +
Sbjct: 252 YFKEMLHQGVYLPNEFIFGSVFSACS----SLLQPEYGRQLHGMSIKFGLGRDVFAGCSL 307
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YAKC L A +VF I +V+WN+++AG YG +++ F+ M + G
Sbjct: 308 CDMYAKCGLLSCARVVFYQIGRP--DLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIP 365
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D TV SLL + P L QG VH + G DLDV V NTL++MY+KC ++ A F
Sbjct: 366 DEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFF 425
Query: 303 DGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
+ + C+ VSW A+++ +E L M + PD +T+ +++ ++ ++
Sbjct: 426 EEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSI 485
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E+G YA GL ++ V N LID+Y+KCGS+ AR++F ++ VVSW+++I G
Sbjct: 486 EIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGY 545
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A G EAL LF + LD++PN VTF+ VL AC+H G +E+GW + + GI
Sbjct: 546 AQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIV-- 603
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
P +H SCM DLL R G L EA F+ M D +W TLL ACK
Sbjct: 604 PTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACK 649
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 222/487 (45%), Gaps = 28/487 (5%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEM 101
T+ ++ AC+ L L + + IH H++KS + KC L A K+FD M
Sbjct: 65 TYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAM 124
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
R+V SW +++ G++Q G N L ++ M G+ D T + +A + L +
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+H+ + A + N IS Y K + + A VF + R ++SW SM+AG +
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMAT--RDLISWGSMIAGFSQ 242
Query: 222 GDKFDDSLNFYRHMMYNGFRLD----VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
++L +++ M++ G L +V S SS + PE GR +H I +G
Sbjct: 243 LGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE---YGRQLHGMSIKFGLGR 299
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV +L MY+KCG + ARV+F I V+W A+I+G+A GD EA+ F M
Sbjct: 300 DVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMR 359
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G +PD +TV S++ C L G Y GL +V VCN L+ MY+KC +
Sbjct: 360 HQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELR 419
Query: 398 DARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA F + +VSW ++ C + + E L + RP+ +T VL A
Sbjct: 420 DAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGAS 479
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
T +E G + N ++ + + DL + G LK A S+ I D
Sbjct: 480 AETVSIEIGNQVHCYALK---TGLNCDISVTNGLIDLYAKCGSLKTARKIFDSV-INPDV 535
Query: 517 GIWGTLL 523
W +L+
Sbjct: 536 VSWSSLI 542
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 201/435 (46%), Gaps = 11/435 (2%)
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLF-YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
+R S N + + ++ F + + G T L A + + L +
Sbjct: 24 LRAEQSSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGR 83
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+H + D+++ N ++ Y KC LK A+ VF + E R VVSW S++AG +
Sbjct: 84 KIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPE--RNVVSWTSVIAGYSQ 141
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
+ ++L FY M+ +G D T S++ + + GR +H+H + F +
Sbjct: 142 NGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIA 201
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG- 340
N LISMY+K I A +F + R +SW +MI+G++Q G EAL F M G
Sbjct: 202 QNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGV 261
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
LP+ S+ S C E G+ + GL +V +L DMY+KCG + AR
Sbjct: 262 YLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCAR 321
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+FY + +V+W +IAG A G+ EA+ F Q+ L P+ +T ++L ACT
Sbjct: 322 VVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPS 381
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEALDFVQSMPIKSDAGI 518
L +G + + Y +K +LD C + + + +L++A+ F + M +D
Sbjct: 382 ELYQG--MQVHGYINK---MGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVS 436
Query: 519 WGTLLCACKIHLNIE 533
W +L AC H E
Sbjct: 437 WNAILTACMHHDQAE 451
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 2/255 (0%)
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQG 263
+LR S N + F++++ + + GF L ++T L+S+ +L G
Sbjct: 23 KLRAEQSSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHG 82
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H H + D+++ N +++MY KCG + A+ +FD + +R VSWT++I+GY+Q
Sbjct: 83 RKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQN 142
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G AL +F M +G +PD T S+I C G + LG+ + +++
Sbjct: 143 GQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQ 202
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
NALI MY+K I DA ++F + + ++SW +MIAG + G +EAL F +++ +
Sbjct: 203 NALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVY 262
Query: 444 -PNRVTFLAVLQACT 457
PN F +V AC+
Sbjct: 263 LPNEFIFGSVFSACS 277
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R S I+ ++ +EA++ F F + G L T +IS C +LE G+
Sbjct: 25 RAEQSSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRK 84
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
++ ++ + N +++MY KCGS+ DA+++F A+PE+ VVSWT++IAG + NG+
Sbjct: 85 IHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQ 144
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI----IQYDDKGISYNP 482
AL+ + Q+++ + P++ TF ++++AC+ G + G + ++ I+ N
Sbjct: 145 GGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNA 204
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG-EYVAYC 541
+ Y+ + + +ALD M + D WG+++ ++G E A C
Sbjct: 205 LISMYT-------KSNVIIDALDVFSRMATR-DLISWGSMIAGFS-----QLGYELEALC 251
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
FK H V + N++ G + +++
Sbjct: 252 YFKEMLHQG---VYLPNEFIFGSVFSACSSL 279
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 297/603 (49%), Gaps = 23/603 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L ++ + ++ NS +R + L ++ M+ D +LTFPF AKACA L
Sbjct: 68 LAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD----HLTFPFAAKACAGLRL 123
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ + +H + + F + C + A +F M R V SWNA++ G
Sbjct: 124 GRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAG 183
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ G+ E L +F M G+ D TV+ + A AK L+ ++VH G+
Sbjct: 184 CVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDY 243
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V+V N I Y KC L+ A VF + + VVSW +M+ D+ ++++ M
Sbjct: 244 VAVKNALIDMYGKCRSLEDARRVFDHCKHD-KDVVSWTAMIGAYVLNDRAFEAISLGCQM 302
Query: 236 MYNGFRL-DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ +G + T+V LLS+ + + H+ I G D++V LI Y++CG
Sbjct: 303 LMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGK 362
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ R+ + R +W A +SGY G +A+ LF M A PD T+ S++
Sbjct: 363 MKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPA 421
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
+S L+ GK + + G + + LID+YSK G + A LF LPEK VV+W
Sbjct: 422 YAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAW 481
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
TT+IAG +++G A+ L+ +++E +PN VT +L AC+H G +++G + +
Sbjct: 482 TTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRN 541
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
G+ N E HYSC+ D+LGR G+++EA +Q MP + +WG LL AC +H N+E
Sbjct: 542 VHGLMPNGE--HYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEF 599
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
GE A LF+L+P + YV + N YA RW V ++R MM + K PG SL
Sbjct: 600 GEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARS 659
Query: 595 KTC 597
C
Sbjct: 660 VQC 662
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 288/598 (48%), Gaps = 104/598 (17%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-----SPFVKCDRL 91
K +L++ QM+ + P+ +P + K+ H H++K FV+ +
Sbjct: 13 KVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGHGSDAFVRNAVI 67
Query: 92 DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
D M R VA WNAM+ G+ + LF M
Sbjct: 68 D--------MYARKVADWNAMVSGYWKWESEGQAQWLFDVMP------------------ 101
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+ +V ++ YAK DL+ A F + ER +VVS
Sbjct: 102 ---------------------ERNVITWTAMVTGYAKVKDLEAARRYFDCMPER--SVVS 138
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+M++G +++L + M+ +R VT
Sbjct: 139 WNAMLSGYAQNGLAEEALRLFDEML-GAYRNSVTW------------------------- 172
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
N +IS Y + GD+DSAR LF+ + R V+W +MI+GYAQ G A+
Sbjct: 173 -----------NAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIE 221
Query: 332 LFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF M A +L PD VT++S+IS CG GALELG W + +K ++ NA+I MY
Sbjct: 222 LFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMY 281
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
S+CGS+ DA+ +F + + VVS+ T+I+G A +G VEA++L + E + P+RVTF+
Sbjct: 282 SRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 341
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
VL AC+H G LE+G + D P +DHY+CM DLLGR G+L++A ++ M
Sbjct: 342 GVLTACSHAGLLEEGRKVFESIKD-------PAIDHYACMVDLLGRVGELEDAKRTMERM 394
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
P++ AG++G+LL A +IH +E+GE A LF+LEP ++ ++ ++N YA GRW V
Sbjct: 395 PMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVE 454
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
IR MK+ VKK G S GK F DR H S+ Y +L L RE Y
Sbjct: 455 RIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGY 512
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 292/567 (51%), Gaps = 44/567 (7%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A +IF+ + + + +N ++ F + G + LF +R G+ D T + +A
Sbjct: 82 LHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKA 141
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ + V+ F + G++ D VCN+ + YA+ ++ VF + +R VV
Sbjct: 142 IGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQR--DVV 199
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
SWN +++G +++D+++ +R M + R + TVVS LS+ + + L G+ +H +
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY 259
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ + + N L+ MY KCG + AR +F+ + +T + WT+M+SGY G LDEA
Sbjct: 260 -VREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEA 318
Query: 330 -------------------------------LRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+ LF M+ PD T++++++GC Q
Sbjct: 319 RELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQL 378
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
G LE GKW Y + + +V ALI+MY+KCG I + E+F L EK SWT++I
Sbjct: 379 GTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSII 438
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
G A+NG+ +AL+LF ++++ ++P+ +TF+ VL AC+H G +E+G +
Sbjct: 439 CGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRK----HFRSMTA 494
Query: 479 SYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI---WGTLLCACKIHLNIE 533
Y P+L+HY C+ DLLGR G+L EA + ++ P ++ I +G LL AC+ H N+E
Sbjct: 495 VYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVE 554
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+GE VA L +E ++ + +AN YA RW+ V +R MK VKK PG S +N
Sbjct: 555 MGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVN 614
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLA 620
G F D H E Y +LD +A
Sbjct: 615 GIVHEFLVGDASHPEMREIYSMLDSIA 641
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 210/453 (46%), Gaps = 50/453 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N I+ K +LLFRQ+++ + P+N T+PF+ KA L ++ + ++G +V
Sbjct: 100 YNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVV 159
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + + R+ ++F+EM RDV SWN ++ G+ + E+ +
Sbjct: 160 KSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVD 219
Query: 128 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M+ ++ + TV+ A I K L L K +H + + + + + N + Y
Sbjct: 220 VFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY-VREQLGFTIKIGNALVDMY 278
Query: 187 AKCDDLKMAELVF--------------------CG-------IEER--LRTVVSWNSMVA 217
KC L +A +F CG + ER +R VV W +M+
Sbjct: 279 CKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMIN 338
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G ++FDD++ +R M D T+V+LL+ L QG+ +H + +
Sbjct: 339 GYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMI 398
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D V LI MY+KCG I+ + +F+G+ ++ SWT++I G A G +AL LF M
Sbjct: 399 DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMV 458
Query: 338 AAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G PD +T + ++S C G +E G K F + ++ + LID+ + G +
Sbjct: 459 QTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQL 518
Query: 397 GDARELFYALP----EKIVVSWTTMIAGCALNG 425
+A EL P E IV + +++ C +G
Sbjct: 519 DEAEELIEKSPNVNNEVIVPLYGALLSACRTHG 551
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 41/368 (11%)
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
+L AE +F I+ + + +N ++ T F ++ +R + G D T +
Sbjct: 81 NLHYAERIFNYID--IPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
+ C + +G V+ + G + D V N+L+ MY++ G + + R +F+ + R
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDV 198
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDN 369
VSW +ISGY + ++A+ +F M+ L P+ TV+S +S C LELGK
Sbjct: 199 VSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHR 258
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
Y L + + NAL+DMY KCG + ARE+F +P K V+ WT+M++G G+ E
Sbjct: 259 YV-REQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDE 317
Query: 430 ALDLFHQ----------------------------LMELDLR---PNRVTFLAVLQACTH 458
A +LF + E+ ++ P+R T +A+L C
Sbjct: 318 ARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQ 377
Query: 459 TGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
G LE+G W I D+ I + + + + ++ + G ++++L+ + K D
Sbjct: 378 LGTLEQGKWIHGYI--DENKIMIDAVVG--TALIEMYAKCGFIEKSLEIFNGLKEK-DTA 432
Query: 518 IWGTLLCA 525
W +++C
Sbjct: 433 SWTSIICG 440
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 17/298 (5%)
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G++ A +F+ I + +I + + G +A+ LF + G PD T +
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
G G + G+ + GL+ + VCN+L+DMY++ G + + R++F +P++ VV
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
SW +I+G + +A+D+F ++ + LRPN T ++ L AC LE G I
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIH-- 257
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC-ACKIHL 530
+Y + + + ++ + + D+ + G L A + MPIK T++C +
Sbjct: 258 RYVREQLGFTIKIGN--ALVDMYCKCGHLSIAREIFNDMPIK-------TVICWTSMVSG 308
Query: 531 NIEIGEY-VAYCLFKLEP-HSAAPYVEMANKYALGGRW-DGVANIRTM-MKRNQVKKF 584
+ G+ A LF+ P + M N Y R+ D VA R M +KR +F
Sbjct: 309 YVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRF 366
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 296/603 (49%), Gaps = 23/603 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
L ++ + ++ NS +R + L ++ M+ D +LTFPF AKACA L
Sbjct: 68 LAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD----HLTFPFAAKACAGLRL 123
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ + +H + + F + C + A +F M R V SWNA++ G
Sbjct: 124 GRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAG 183
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ G+ E L +F M G+ D TV+ + A AK L+ ++VH G+
Sbjct: 184 CVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDY 243
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V+V N I Y KC L+ A VF + + VVSW +M+ D+ ++++ M
Sbjct: 244 VAVKNALIDMYGKCRSLEDARRVFDHCKHD-KDVVSWTAMIGAYVLNDRAFEAISLGCQM 302
Query: 236 MYNGFRL-DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ +G + T+V LLS+ + + H+ I G D++V LI Y++CG
Sbjct: 303 LMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGK 362
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ R+ + R +W A +SGY G +A+ LF M A PD T+ S++
Sbjct: 363 MKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPA 421
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
+S L+ GK + + G + + LID+YSK G + A LF LPEK VV+W
Sbjct: 422 YAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAW 481
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
TT+IAG ++G A+ L+ +++E +PN VT +L AC+H G +++G + +
Sbjct: 482 TTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRN 541
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
G+ N E HYSC+ D+LGR G+++EA +Q MP + +WG LL AC +H N+E
Sbjct: 542 VHGLMPNGE--HYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEF 599
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
GE A LF+L+P + YV + N YA RW V ++R MM + K PG SL
Sbjct: 600 GEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARS 659
Query: 595 KTC 597
C
Sbjct: 660 VQC 662
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 297/608 (48%), Gaps = 29/608 (4%)
Query: 46 KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRL 91
K+ E L + + + C +Q++HGH++K+ + KC +
Sbjct: 56 KEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNM 115
Query: 92 DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
+ A ++F+ M R+V +W ++VGF Q ++ + +F M G T+ + A
Sbjct: 116 EDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHAC 175
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+ L L H++ I +D D SV + S Y+KC L+ A F I E+ V+S
Sbjct: 176 SSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREK--NVIS 233
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
W S V+ C L + M+ + + T+ S LS +L G V S I
Sbjct: 234 WTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCI 293
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL----- 326
+G++ ++ V N+L+ +Y K G I A F+ + D + V+W AMI+G+AQ +L
Sbjct: 294 KFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNL 353
Query: 327 ------DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
EAL++F + +G PDL T+ S++S C + A+E G+ G +V
Sbjct: 354 SACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDV 413
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+V +LI MY+KCGSI A + F + + +++WT+MI G + +G +AL +F +
Sbjct: 414 IVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLA 473
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
+RPN VTF+ VL AC+H G + + A++ + K P +DHY CM D+ R G+L
Sbjct: 474 GVRPNTVTFVGVLSACSHAGMVSQ--ALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRL 531
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
++AL+F++ M + IW + C+ H N+E+G Y + L L+P YV + N Y
Sbjct: 532 EQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMY 591
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
R+D V+ +R MM+ +V K S I K +F D+ H S L L+ L
Sbjct: 592 LSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLL 651
Query: 621 LHSREEAY 628
++ Y
Sbjct: 652 AKAKNLGY 659
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 206/459 (44%), Gaps = 47/459 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + V ++ + +F++M P+ T + AC+ L L H +I+
Sbjct: 133 WTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYII 192
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K S + KC RL+ A K F + ++V SW + + G LR
Sbjct: 193 KYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLR 252
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M I+ + T+ L L V S I G ++++ V N+ + Y
Sbjct: 253 LFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYL 312
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAG--------------CTYGDKFDDSLNFYR 233
K + A F +++ ++V+WN+M+AG C G ++L +
Sbjct: 313 KSGFIVEAHRFFNRMDD--VSMVTWNAMIAGHAQMMELTKDNLSACQRG---SEALKIFS 367
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ +G + D+ T+ S+LS VC A+ QG +H+ I GF DV V +LISMY+K
Sbjct: 368 KLNQSGMKPDLFTLSSVLS--VCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNK 425
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
CG I+ A F + RT ++WT+MI+G++Q G +AL +F M AG P+ VT + +
Sbjct: 426 CGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGV 485
Query: 352 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA----RELFYAL 406
+S C +G + +F+ +K + ++DM+ + G + A +++ Y
Sbjct: 486 LSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEP 545
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
E I W+ IAGC +G QL L L+P
Sbjct: 546 SEFI---WSNFIAGCRSHGNLELGFYASEQL--LSLKPK 579
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 137/342 (40%), Gaps = 33/342 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + W S + + K L LF +M DI+PN T C ++ L
Sbjct: 227 REKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGT 286
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ +K ++K + A++ F+ M + +WNAM+ G AQM
Sbjct: 287 QVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMM 346
Query: 121 FL-----------ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
L L++F + G++ D T+ + + + +H+ I
Sbjct: 347 ELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIK 406
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G +DV V + IS Y KC ++ A F +E RT+++W SM+ G + +L
Sbjct: 407 TGFLSDVIVSTSLISMYNKCGSIERASKAF--LEMSTRTMIAWTSMITGFSQHGMSQQAL 464
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI---HYGFDLDVSVINTLI 286
+ + M G R + T V +LS+ C A + + ++ I Y + ++
Sbjct: 465 HIFEDMSLAGVRPNTVTFVGVLSA--CSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMV 522
Query: 287 SMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGYAQKGDLD 327
M+ + G ++ A + + + W+ I+G G+L+
Sbjct: 523 DMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLE 564
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 291/571 (50%), Gaps = 7/571 (1%)
Query: 67 LSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
L + ++ ++ G ++ +++ L A K F+ + ++ SWN +L ++ +VL
Sbjct: 39 LVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVL 98
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+LF M G D ++ +A K HS I + ++ D V ++ Y
Sbjct: 99 QLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVY 158
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVT 245
+ L+ A VF E L+ V W M+ G + ++F + M +GF LD
Sbjct: 159 TELGSLEEAHKVF--EEVPLKNSVIWGVMIKGHLNFSEEFG-VFELFSRMRRSGFELDPF 215
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFDG 304
V L+ + A +G+ H I F D + + +L+ MY KCG +D A LF+
Sbjct: 216 VVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEE 275
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I R V W+A+I+G+A+ G E++ +F M A P+ VT S++ C G+L+ G
Sbjct: 276 ISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQG 335
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ Y G++ +V + IDMY+KCG I A +F +PEK V SW+TMI G ++
Sbjct: 336 RSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMH 395
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EAL+LF+++ ++ PN VTF++VL AC+H+G +E+GW+ D GI+ P
Sbjct: 396 GLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGIT--PVE 453
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+CM DLLGR GK+ EAL F+ +MP + A WG LL AC+IH E+ E VA L
Sbjct: 454 EHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLP 513
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LE + YV ++N YA G W+ V R M + K G + I K F++EDR
Sbjct: 514 LESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDR 573
Query: 605 YHAESELTYPVLDCLALHSREEAYSSHLKWI 635
+ ++ + + L RE Y L+++
Sbjct: 574 FAYKNTQIESLWNSLKERMRELGYVPDLRFV 604
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 205/442 (46%), Gaps = 21/442 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ + + L LF++M + ++ F KAC LS +++ H
Sbjct: 77 NLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFH 136
Query: 78 GHIVK-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+K P+V + L+ A+K+F+E+ +++ W M+ G
Sbjct: 137 SLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEF 196
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTW 182
V LF MR G + D V GL QA + K+ H I +D++ + +
Sbjct: 197 GVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSL 256
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y KC L A +F I R VV W++++AG + +S++ +R M+ +
Sbjct: 257 VDMYMKCGFLDFALKLFEEIS--YRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTP 314
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T S++ + +L QGR VH + I G +LDV + I MY+KCG I +A +F
Sbjct: 315 NSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVF 374
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
I ++ SW+ MI+G+ G EAL LF+ M + +LP+ VT +S++S C SG +E
Sbjct: 375 CQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIE 434
Query: 363 LGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
G W F + + G+ ++D+ + G I +A +P E +W ++
Sbjct: 435 EG-WSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLG 493
Query: 420 GCALNGEFVEALDLFHQLMELD 441
C ++ A ++ +L+ L+
Sbjct: 494 ACRIHRRAELAEEVAKKLLPLE 515
>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 283/582 (48%), Gaps = 25/582 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I LF M Q P+ T + C + + + +HG
Sbjct: 9 WNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGIAA 68
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC LD A +F EM + SWN M+ ++Q G +E +
Sbjct: 69 KSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSGLMEEAIT 128
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F NM ++ VT++ L A H H + +H + G+ D+SV + + +Y+
Sbjct: 129 VFKNMFEKSVEISPVTIINLLSA--HVSH----EPLHCLVVKSGMVNDISVVTSLVCAYS 182
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C L AE ++ + ++V S+V+ D ++ ++ M ++D +
Sbjct: 183 RCGYLDSAERLYASANQD--SIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMKIDAVAL 240
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V +L + G +H + I G V+N LI+MYSK D+++ LF + +
Sbjct: 241 VGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFLFQQLQE 300
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKW 366
+SW ++ISG Q G A +F M+ + G LPD +T+ S+++GC Q L LGK
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGKE 360
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y ++ VC ALIDMY+KCG+ A +F ++ +W +MI+G +L+G
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL + ++ E L+P+++TFL VL ACTH GF+++G + GIS P L H
Sbjct: 421 QNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEFGIS--PCLQH 478
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+ M LLGR EAL + M IK D+ +WG LL AC IH +E+GEY+A +F L+
Sbjct: 479 YALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYIAKKMFMLD 538
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+ YV M+N YA WD V +R MMK N + G S
Sbjct: 539 YKNGGLYVLMSNLYATEAMWDDVVRVRKMMKDNGYDGYLGVS 580
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 219/462 (47%), Gaps = 31/462 (6%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M RD WNA++ G+++ G+ + +LF M G T++ L +S
Sbjct: 1 MPERDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+SVH G++ D V N IS Y+KC +L AE++F E + ++ VSWN+M+ +
Sbjct: 61 RSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLF--REMKDKSTVSWNTMIGAYS 118
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
++++ +++M + T+++LLS+ V E L H + G D+S
Sbjct: 119 QSGLMEEAITVFKNMFEKSVEISPVTIINLLSAHVSHEPL------HCLVVKSGMVNDIS 172
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V+ +L+ YS+CG +DSA L+ + V T+++S YA+KGD+D A+ F M
Sbjct: 173 VVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLC 232
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D V ++ ++ GC S +++G YA GL +V N LI MYSK +
Sbjct: 233 MKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVL 292
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHT 459
LF L E ++SW ++I+GC +G A ++FHQ+ + L P+ +T ++L C+
Sbjct: 293 FLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQL 352
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAG 517
L G + + N E +++ C A D+ + G +A +S+ A
Sbjct: 353 CCLNLG-----KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA- 406
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
W +++ Y L L+ + + Y+EM K
Sbjct: 407 TWNSMIS--------------GYSLSGLQNRALSCYLEMREK 434
>gi|242066372|ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
gi|241934306|gb|EES07451.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
Length = 706
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 190/600 (31%), Positives = 295/600 (49%), Gaps = 51/600 (8%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS-----PFV---------KCDRLDCAY 95
+ PN T + +AC D +M+HG++V PFV K + A
Sbjct: 132 VRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKAGDVVSAR 191
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++ + RDV SW A++ G G LE L +F M G+ + VT++ + QA
Sbjct: 192 RLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLSVIQACSLMG 251
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L VH+ + + ++ D SV N+ I YAK ++ A +F G + V S +
Sbjct: 252 ASELFSPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIWLFRGFYLKSGNVCSNEDV 311
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+A YG S+ G VH+H I G
Sbjct: 312 LAAVLYGCTISGSVK-------------------------------NGVGVHAHTIKIGA 340
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+S+ N+L+ MY++ ID+A +F+G+ + VSW +IS A+ ++EA+ LF
Sbjct: 341 FPSISIENSLMGMYARFEQIDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAMELFSV 400
Query: 336 MEAA--GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ AA G PD VTVLS++ C +G L G+ Y G +V +CNALI MY+K
Sbjct: 401 LHAAAGGLAPDFVTVLSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNALITMYAKL 460
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR-PNRVTFLAV 452
G I A +F + K +VSW +MI ++G+ AL +FHQL + PN +TF++V
Sbjct: 461 GRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDGHLALRVFHQLKDAGTPVPNAITFVSV 520
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
+ AC+H+G + +G+ + + S P +DHY+C+ DLLGR G+ EA +F++ MP+
Sbjct: 521 ISACSHSGLISEGY--KCFESMGRDHSIEPSMDHYACVVDLLGRSGRFAEAEEFIRDMPV 578
Query: 513 KSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
++ IWG LL AC++H N+++ E A L LEP S V ++N YA GRW A I
Sbjct: 579 HPNSSIWGPLLAACQLHGNVDLAEKAAKELSALEPESDIWRVSLSNTYASAGRWRDAAKI 638
Query: 573 RTMMKRNQVKKFPGQSLFHING-KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
RT M+R ++K G S + G ++ F + D H ++E Y V + H + A H
Sbjct: 639 RTEMRRVGLRKETGWSFVDVGGVESFKFVSADTRHHDAEEIYSVWHSMNRHMADLAADVH 698
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 204/414 (49%), Gaps = 26/414 (6%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ W + I V + L +F M ++ + PNN+T + +AC+ + +H
Sbjct: 202 VVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHA 261
Query: 79 HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF--YNMRLVG 136
+V L+ + D + N++++ +A+ GF+E + LF + ++
Sbjct: 262 LVV--------LLELEH---------DASVVNSLIMMYAKNGFVEEAIWLFRGFYLKSGN 304
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
+ ++ + + + + VH+ I IG +S+ N+ + YA+ + + A
Sbjct: 305 VCSNEDVLAAVLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMGMYARFEQIDAAH 364
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR--HMMYNGFRLDVTTVVSLLSSF 254
VF G+ +++ +VSWN++++ D+ ++++ + H G D TV+S+L +
Sbjct: 365 FVFEGM--KVKDIVSWNTIISCLAKSDRVNEAMELFSVLHAAAGGLAPDFVTVLSILQAC 422
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
L QG+++H + + GF DVS+ N LI+MY+K G ID A ++F+ + + VSW
Sbjct: 423 SNAGLLHQGQMLHGYIMKSGFVYDVSICNALITMYAKLGRIDFAEMIFERMDIKDLVSWN 482
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELG-KWFDNYAC 372
+MI+ Y GD ALR+F ++ AG +P+ +T +S+IS C SG + G K F++
Sbjct: 483 SMINAYGMHGDGHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISEGYKCFESMGR 542
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNG 425
++ ++ ++D+ + G +A E +P S W ++A C L+G
Sbjct: 543 DHSIEPSMDHYACVVDLLGRSGRFAEAEEFIRDMPVHPNSSIWGPLLAACQLHG 596
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 180/388 (46%), Gaps = 38/388 (9%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-----IQA 139
+++C L A ++ D RD A++ +++ ++G + LR F +M G ++
Sbjct: 75 YLQCGLLSRALRLLDGTPRRDAATYASLISAHCRLGAPLDALRAFLDMLDWGCSDAAVRP 134
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
+ T + QA A+ L + VH + + G D V + ++ YAK D+ A +
Sbjct: 135 NEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKAGDVVSARRLV 194
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
G+ R VVSW ++++GC ++ L + M+ +G + T++S++ + A
Sbjct: 195 LGLP--CRDVVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLSVIQACSLMGA 252
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
VH+ + + D SV+N+LI MY+K G ++ A LF G
Sbjct: 253 SELFSPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIWLFRG--------------- 297
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
F +++ + + +++ GC SG+++ G + G +
Sbjct: 298 --------------FYLKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHTIKIGAFPS 343
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ + N+L+ MY++ I A +F + K +VSW T+I+ A + EA++LF L
Sbjct: 344 ISIENSLMGMYARFEQIDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAMELFSVLHA 403
Query: 440 L--DLRPNRVTFLAVLQACTHTGFLEKG 465
L P+ VT L++LQAC++ G L +G
Sbjct: 404 AAGGLAPDFVTVLSILQACSNAGLLHQG 431
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 5/190 (2%)
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-- 336
++ N+L+ Y +CG + A L DG R ++ ++IS + + G +ALR F M
Sbjct: 65 LAATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLISAHCRLGAPLDALRAFLDMLD 124
Query: 337 ---EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
A P+ T +++ CG + LG+ Y +GG + V +L++MY+K
Sbjct: 125 WGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKA 184
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR L LP + VVSWT +I+GC LNG E L++F ++E + PN VT L+V+
Sbjct: 185 GDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLSVI 244
Query: 454 QACTHTGFLE 463
QAC+ G E
Sbjct: 245 QACSLMGASE 254
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 19/304 (6%)
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
A H +LLKS G A ++ N+ + +Y +C L A + G R ++
Sbjct: 47 ALHAALLKS----GALRSPQAPLAATNSLLHAYLQCGLLSRALRLLDGTPRR--DAATYA 100
Query: 214 SMV-AGCTYGDKFDDSLNFYRHMMYNG-----FRLDVTTVVSLLSSFVCPEALVQGRLVH 267
S++ A C G D +L + M+ G R + T ++L + GR+VH
Sbjct: 101 SLISAHCRLGAPLD-ALRAFLDMLDWGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVH 159
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ + GF D V+ +L++MY+K GD+ SAR L G+ R VSWTA+ISG G L+
Sbjct: 160 GYLVAGGFCGDPFVVGSLVNMYAKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLE 219
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
E L +F M G LP+ VT+LS+I C GA EL L+ + V N+LI
Sbjct: 220 EGLEVFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVVLLELEHDASVVNSLI 279
Query: 388 DMYSKCGSIGDARELF--YALPEKIVVSWTTMIA----GCALNGEFVEALDLFHQLMELD 441
MY+K G + +A LF + L V S ++A GC ++G + + +++
Sbjct: 280 MMYAKNGFVEEAIWLFRGFYLKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHTIKIG 339
Query: 442 LRPN 445
P+
Sbjct: 340 AFPS 343
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 180/629 (28%), Positives = 305/629 (48%), Gaps = 19/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I + + + L +F QM++ D+ P +T+ I ACA L IHG I+
Sbjct: 74 WTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQIL 133
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC + A+ F + RDV SW AM+ Q
Sbjct: 134 QQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARW 193
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ M+L G+ + +T+ + A +LS K ++S +++DV V N+ ++ +
Sbjct: 194 LYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFG 253
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
L A +F + +R VV+WN ++ + F +++ + + +G + + T
Sbjct: 254 NAGLLGDARRLFEDMVDR--DVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITF 311
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V +L+ + +L +G+++H G+D DV V L+S+Y +C A +F +
Sbjct: 312 VLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGS 371
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++WT M YAQ G EAL+LF M+ G P T+++++ C AL+ G+
Sbjct: 372 KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 431
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
++ G + ++V ALI+MY KCG + +AR +F + ++ ++ W +M+ A +G +
Sbjct: 432 HSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYY 491
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E L LF+Q+ + + V+F++VL A +H+G + G+ + D I+ PEL Y
Sbjct: 492 DETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPEL--Y 549
Query: 488 SCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
C+ DLLGR G+++EA+D V + D +W TLL AC+ H + + A + + +
Sbjct: 550 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD 609
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + YV ++N YA G WDGV +R +M+ VKK PG+S I + F DR H
Sbjct: 610 PSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSH 669
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKWI 635
Y LD L R Y K I
Sbjct: 670 PRRHPIYAELDVLNSEMRAAGYIPDTKMI 698
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 233/495 (47%), Gaps = 24/495 (4%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYK 96
+P+ F + + C+ ++ + + +H H+ F +C + A +
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F+ + +DV +W M+ + Q G + L +FY M+ + VT + + A +
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L +H + G + DV V I+ Y KC ++ A F +E R VVSW +M+
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH--RDVVSWTAMI 179
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
A C D+F + YR M +G + T+ ++ +++ P L +G+ ++S +
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
DV V+N+ ++M+ G + AR LF+ + DR V+W +I+ Y Q + EA+RLF +
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ G + +T + M++ +L GK G +V+V AL+ +Y +C +
Sbjct: 300 QQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
G A ++F + K V++WT M A NG EAL LF ++ RP T +AVL C
Sbjct: 360 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 419
Query: 457 THTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
H L+KG I II+ + E+ + + ++ G+ GK+ EA + M K
Sbjct: 420 AHLAALQKGRQIHSHIIEN-----GFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KR 473
Query: 515 DAGIWGTLLCACKIH 529
D +W ++L A H
Sbjct: 474 DILVWNSMLGAYAQH 488
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 119/226 (52%)
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
F+ D V+LL + + GR VH H GF+ + V LI MY++CG + A+
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F+ + + +WT MI Y Q+GD D AL +F+ M+ +P VT +++++ C +
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+L+ G G + +V V ALI+MY+KCGS+ A + F L + VVSWT MIA
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
C + +F A L+ ++ + PN++T V A +L +G
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEG 226
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 301/587 (51%), Gaps = 39/587 (6%)
Query: 64 CAKLSDL--IYSQMIHGHIVKSPFVK---------CDRLDCAYKIFDEMAVRDVASWNAM 112
C+ L+ + I++Q++ ++ + FV C ++ A +F+++ DV +N +
Sbjct: 27 CSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTL 86
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
+ + +F+ M+ G+ AD T L +A + +++ +H+ +G
Sbjct: 87 IRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGF 146
Query: 173 DADVSVCNTWISSYAKC--DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
D+ V N+ I SY KC D + A VF + ER VSWNSM+ G + ++
Sbjct: 147 CLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAER--DTVSWNSMIGGLVKVGELGEARR 204
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-------DVSVIN 283
+ M D + ++L +V + ++ F+L +V +
Sbjct: 205 LFDEMPER----DTVSWNTILDGYV-----------KAGEMNAAFELFEKMPARNVVSWS 249
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
T++ YSK GD+D AR+LFD + + V WT MISGYA+KG +A+ L+ ME AG
Sbjct: 250 TMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKF 309
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D TV+S++S C SG L LGK K + V NALIDMY+KCGS+ +A +F
Sbjct: 310 DDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIF 369
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ + K VVSW +I G A++G +AL LF ++ P++VTF+ VL ACTH GF++
Sbjct: 370 HGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVD 429
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+G D G+ PE++HY CM DLLGR G+LKEA V SMP++ +A IWGTLL
Sbjct: 430 EGLHYFHAMERDYGVP--PEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLL 487
Query: 524 CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
AC++H + E V L K E + ++N YA G WD ANIR MK ++K
Sbjct: 488 GACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQK 547
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
G S ++ + FT DR H +S+ Y +D L H + SS
Sbjct: 548 PSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGLGQHINKLTTSS 594
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 215/440 (48%), Gaps = 30/440 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ IR V +E +F +M+ + + +N T+PF+ KAC+ + +MIH +
Sbjct: 83 YNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVE 142
Query: 82 KSPF--------------VKC--DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K F KC D + A K+F+ MA RD SWN+M+ G ++G L
Sbjct: 143 KMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEA 202
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA-DVSVCNTWIS 184
RLF M + D V+ + + A ++ +F + + A +V +T +
Sbjct: 203 RRLFDEMP----ERDTVSWNTILDGYVKAGEMNA-----AFELFEKMPARNVVSWSTMVL 253
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+K D+ MA ++F + ++ +V W M++G D++N Y M G + D
Sbjct: 254 GYSKAGDMDMARILFDKMP--VKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDD 311
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TV+S+LS+ L G+ VH+ F V N LI MY+KCG +++A +F G
Sbjct: 312 GTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHG 371
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + VSW A+I G A G ++AL+LF M+ G +PD VT + ++ C +G ++ G
Sbjct: 372 MVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEG 431
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCA 422
+F G+ V ++D+ + G + +A L +++P E + W T++ C
Sbjct: 432 LHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACR 491
Query: 423 LNGEFVEALDLFHQLMELDL 442
++ A ++F +L++ +L
Sbjct: 492 MHSATGLAEEVFDRLVKSEL 511
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 315/611 (51%), Gaps = 30/611 (4%)
Query: 22 WNSQIREAVNKN----EAHKTLLLFRQMKQ--NDIEPNNLTFPFIAKACAKLSDLIYSQM 75
WNS IR ++N EA++ FR + + + + P+ T + C+ ++ +
Sbjct: 279 WNSLIR-GFSENGFWLEAYRA---FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMV 334
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IHG VK V KC L A +F ++ + V SWN+M+ +++ GF
Sbjct: 335 IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394
Query: 122 LENVLRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ L M + ++ + VT++ L A + L L+++H + + +
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N +I++YAKC L AE VF G+ + +V SWN+++ G +L+FY M G
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTK--SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG 512
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D ++VSLL + L G+ +H + G +++ V +L+S+Y C R
Sbjct: 513 ILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGR 572
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F+ + D+ V W AM+SGY+Q +EAL LF M + G PD + + S++ C Q
Sbjct: 573 TYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLS 632
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL LGK +A L ++ V +L+DMY+K G +G ++ +F L K V SW MI
Sbjct: 633 ALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G ++G+ +A++LF + D +P+R TFL VLQAC H G + +G ++ +
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEG--LNYLAQMQTLYK 750
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
PEL+HY+C+ D+LGR G+L EAL+F+ MP + DA IW +LL + ++++E+GE A
Sbjct: 751 LEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFA 810
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L LE + A Y+ ++N YA G+WD V +R MK ++K G S + GK +F
Sbjct: 811 EKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSF 870
Query: 600 TAEDRYHAESE 610
A + + S+
Sbjct: 871 IAGENSNPSSD 881
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 228/464 (49%), Gaps = 21/464 (4%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
QWN+ + V + + F ++ + +P+N TFP + KAC D+ + +HG
Sbjct: 176 QWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGM 235
Query: 80 IVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
VK + KC LD A ++FD+M +++ SWN+++ GF++ GF
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 295
Query: 126 LRLFYNMRLV--GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
R F ++ G+ D T++ L ++ + +H + +G+ ++ VCN I
Sbjct: 296 YRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALI 355
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC L A ++F IE ++VVSWNSM+ + ++ + R M ++
Sbjct: 356 DMYSKCGCLSEAAILFRKIEN--KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELME 413
Query: 244 VT--TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
V T+++LL + + L+ R +H + + + F + N I+ Y+KCG + A +
Sbjct: 414 VNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHV 473
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F G+ ++ SW A+I G+AQ GD +AL +F M G LPD +++S++ CG+ G L
Sbjct: 474 FFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ GK + GL+ N V +L+ +Y C R F + +K V W M++G
Sbjct: 534 QYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGY 593
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ N EAL LF Q++ L P+ + ++L AC+ L G
Sbjct: 594 SQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG 637
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 7/377 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAK 155
+FD + +++ WNA++ G+ + + + F + + Q D T L +A
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ L KSVH + +G+ D+ V N I+ Y KC L A +F + E + ++SWNS+
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPE--QNLISWNSL 282
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRL--DVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+ G + + ++ +R ++ +G L DV T+V+LL + G ++H +
Sbjct: 283 IRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKL 342
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G ++ V N LI MYSKCG + A +LF I +++ VSW +MI Y+++G + E L
Sbjct: 343 GLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLL 402
Query: 334 FAMEAAGELPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
M EL ++ VT+L+++ C + L + Y+ + ++ NA I Y+
Sbjct: 403 RKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYA 462
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCGS+ A +F+ + K V SW +I G A NG+ ++ALD + ++ L + P+ + ++
Sbjct: 463 KCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVS 522
Query: 452 VLQACTHTGFLEKGWAI 468
+L AC G L+ G I
Sbjct: 523 LLLACGRLGLLQYGKEI 539
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 157/287 (54%), Gaps = 12/287 (4%)
Query: 178 VCNT-WISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
V NT I+ Y+ C + LVF +RL + + WN++V+G + +D++++ +
Sbjct: 144 VLNTRLITMYSICGYPLESRLVF----DRLLNKNLFQWNALVSGYVRNELYDEAIHTFLE 199
Query: 235 MM-YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
++ F+ D T L+ + + G+ VH + G +D+ V N +I++Y KCG
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCG 259
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSM 351
+D A LFD + ++ +SW ++I G+++ G EA R F ++ +G+ +PD+ T++++
Sbjct: 260 FLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTL 319
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C G +++G A GL +MVCNALIDMYSKCG + +A LF + K V
Sbjct: 320 LPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV 379
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQL-MELDL-RPNRVTFLAVLQAC 456
VSW +MI + G E DL ++ ME +L N VT L +L AC
Sbjct: 380 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPAC 426
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 281 VINT-LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V+NT LI+MYS CG +R++FD + ++ W A++SGY + DEA+ F + +
Sbjct: 144 VLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISV 203
Query: 340 GEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
E PD T +I C + LGK A GL ++ V NA+I +Y KCG + +
Sbjct: 204 TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDE 263
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNRVTFLAVLQAC 456
A ELF +PE+ ++SW ++I G + NG ++EA F L+E L P+ T + +L C
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVC 323
Query: 457 THTGFLEKGWAI 468
+ G ++ G I
Sbjct: 324 SGEGNVDVGMVI 335
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 23/301 (7%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ +++ WN+ I + K L + +M + I P++ + + AC +L L Y +
Sbjct: 479 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IHG +++ S + C + F+ M ++ WNAML G++Q
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNEL 598
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L LF M G++ D + + + A L L K VH F + + D V +
Sbjct: 599 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 658
Query: 182 WISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ YAK L ++ +F RL + V SWN M+ G + + ++ + M +
Sbjct: 659 LMDMYAKSGFLGHSQRIF----NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSD 714
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDS 297
+ D T + +L + C LV L + + Y + ++ +I M + G ++
Sbjct: 715 KQPDRFTFLGVLQA-CCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNE 773
Query: 298 A 298
A
Sbjct: 774 A 774
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 309 TRVSWTAMISGYAQKGDLDEALRLF---FAMEAAGELPDLVTVLSMI-SGCGQSGALELG 364
+++S IS + GDL+ AL + A +L + M+ CGQ +E+G
Sbjct: 67 SQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIG 126
Query: 365 KWFDNYAC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
+ D C S + ++ LI MYS CG ++R +F L K + W +++G
Sbjct: 127 RKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVR 186
Query: 424 NGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACT-----HTGFLEKGWAISIIQYDDKG 477
N + EA+ F +L+ + + +P+ TF +++ACT H G G A+ + D
Sbjct: 187 NELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLF 246
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + M L G+ G L EA++ MP + + W +L+
Sbjct: 247 VG--------NAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLI 283
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 279/544 (51%), Gaps = 35/544 (6%)
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHIGVDADVSVCNTWI 183
+LR++ M G + D T L +A A + +VH+ + G++ + V ++ +
Sbjct: 2 LLRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLV 61
Query: 184 SSYAKCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YA D +A + R T V WN++++G +F S + M+ G
Sbjct: 62 LMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVP 121
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC---------- 292
T +++LS+ + + G VH + G D+ V N LI MY++C
Sbjct: 122 TPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELF 181
Query: 293 ---------------------GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
G +D AR LFD + +R VSWTAMI GY Q G EAL
Sbjct: 182 EGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALE 241
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+F M+ + D T++S+++ C Q GALE G+W Y G+K + V NAL+DMYS
Sbjct: 242 MFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYS 301
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCGSI A +F + + +WT +I G A+NG EA+++F++++ + P+ VTF+
Sbjct: 302 KCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIG 361
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
VL ACTH G ++KG + GI+ P + H+ C+ DLLGR GKLKEAL+ + +MP
Sbjct: 362 VLTACTHAGLVDKGRDFFLSMTGSYGIA--PNVMHFGCLIDLLGRAGKLKEALETIGNMP 419
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
++ ++ IWGTLL AC++H N EIG+ A L +L+ + Y+ ++N YA RW+ V
Sbjct: 420 MRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRR 479
Query: 572 IRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
+R ++ +KK PG SL +NG F A DR H S+ Y LD + ++ Y
Sbjct: 480 LRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLKDAGYVPD 539
Query: 632 LKWI 635
L I
Sbjct: 540 LTEI 543
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 3/219 (1%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
V S F++ ++D A +FD M RD SW AM+ G+ Q G L +F M+ ++AD
Sbjct: 195 VISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRAD 254
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T++ + A L + + G+ D V N + Y+KC ++ A VF
Sbjct: 255 EFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFK 314
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
E +R +W +++ G ++++N + M+ D T + +L++ +
Sbjct: 315 --EMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLV 372
Query: 261 VQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+GR S YG +V LI + + G + A
Sbjct: 373 DKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEA 411
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
W + I V + + L +FR+M+ + + + T + ACA+L L
Sbjct: 223 WTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMS 282
Query: 71 ---IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
I G+ + + KC + A +F EM +RD +W A+++G A G E +
Sbjct: 283 RHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAIN 342
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI----GVDADVSVCNTWI 183
+FY M V D VT +G+ A HA L+ F + + G+ +V I
Sbjct: 343 MFYRMLRVFEAPDEVTFIGVLTACTHA---GLVDKGRDFFLSMTGSYGIAPNVMHFGCLI 399
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ LK A + R + + W +++A C
Sbjct: 400 DLLGRAGKLKEALETIGNMPMRPNSAI-WGTLLAAC 434
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 188/598 (31%), Positives = 292/598 (48%), Gaps = 51/598 (8%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K + + A K+FDE+ R+ +W ++ GFA+ G E V LF M+ G + T+
Sbjct: 334 YAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTL 393
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + +L L K VH++ + G+D DV + N+ + Y KC + AE +F + E
Sbjct: 394 SSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNE 453
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ-- 262
VVSWN M+ + SL+ +R + Y T V LL AL Q
Sbjct: 454 G--DVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLY 511
Query: 263 -----------------------------GRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
GR +H + +GFD D + ++L+ MY KCG
Sbjct: 512 CMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCG 571
Query: 294 DIDSARVLF-DGICDRTR---------------VSWTAMISGYAQKGDLDEALRLFFAME 337
+D A ++ D D R VSW +M+SGY G ++ L+ F M
Sbjct: 572 RMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMV 631
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+ D+ TV ++IS C +G LE G+ Y G + + V ++LIDMYSK GS+
Sbjct: 632 RELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLD 691
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
DA +F E +V WT+MI+G AL+G+ + A+ LF +++ + PN VTFL VL AC+
Sbjct: 692 DAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACS 751
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
H G +E+G + D I NP ++H + M DL GR G L + +F+ I
Sbjct: 752 HAGLIEEGCRYFRMMKDAYCI--NPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTS 809
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK 577
+W + L +C++H N+E+G++V+ L ++ P YV ++N A RWD A +R++M
Sbjct: 810 VWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMH 869
Query: 578 RNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
+ VKK PGQS + + TF DR H + + Y LD L +E YS +K +
Sbjct: 870 QRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLV 927
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 200/468 (42%), Gaps = 69/468 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W I + LFR+M+ PN T + K C+ ++L + +H
Sbjct: 358 WTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWML 417
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEM-------------------------- 101
G+ + ++KC + A ++F+ M
Sbjct: 418 RNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLD 477
Query: 102 -----AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+DV SWN ++ G Q G+ + L Y M G + VT A H
Sbjct: 478 MFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSH 537
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI-------------- 202
+ L + +H + G D+D + ++ + Y KC + A ++ +
Sbjct: 538 VELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSY 597
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+E +VSW SMV+G + K++D L +R M+ +D+ TV +++S+ L
Sbjct: 598 KEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEF 657
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR VH++ G +D V ++LI MYSK G +D A ++F + V WT+MISGYA
Sbjct: 658 GRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYAL 717
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWF----DNYACSGGLK 377
G A+ LF M G +P+ VT L +++ C +G +E G ++F D Y + G++
Sbjct: 718 HGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVE 777
Query: 378 DNVMVCNALIDMYSKCGSIGDARE-LFYALPEKIVVSWTTMIAGCALN 424
C +++D+Y + G + + +F + W + ++ C L+
Sbjct: 778 H----CTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLH 821
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N L+++Y+K ++ A+ LFD I R +WT +ISG+A+ G + LF M+A G
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ T+ S++ C L+LGK + G+ +V++ N+++D+Y KC A L
Sbjct: 388 PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERL 447
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
F + E VVSW MI G+ ++LD+F +L D+
Sbjct: 448 FELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDV 487
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
LG Y +G L+ + N L+ +Y+K ++ A++LF +P++ +WT +I+G A
Sbjct: 308 LGTLHALYVKNGSLQ-TLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFA 366
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT-----------HTGFLEKGWAISII 471
G +LF ++ PN+ T +VL+ C+ H L G + ++
Sbjct: 367 RAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVV 426
Query: 472 ---------------QYDDKGISYNPELD--HYSCMADLLGRKGKLKEALDFVQSMPIKS 514
+Y ++ E D ++ M R G ++++LD + +P K
Sbjct: 427 LGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYK- 485
Query: 515 DAGIWGTLL 523
D W T++
Sbjct: 486 DVVSWNTIV 494
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 30/223 (13%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W S + V + L FR M + + + T I ACA L + + +H
Sbjct: 604 IVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHA 663
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
++ K + K LD A+ +F + ++ W +M+ G+A G +
Sbjct: 664 YVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMH 723
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDADVS 177
+ LF M GI + VT +G+ A HA ++ ++K + ++ V
Sbjct: 724 AIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYC------INPGVE 777
Query: 178 VCNTWISSYAKCDDL-KMAELVFCGIEERLRTVVSWNSMVAGC 219
C + + Y + L K +F L +V W S ++ C
Sbjct: 778 HCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSV--WKSFLSSC 818
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 233/419 (55%), Gaps = 5/419 (1%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R VSWN+++ GC + ++L+ R M +GF D T+ ++L F + +G +V
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + I GFD DV V ++LI MY+ C +D + +FD D V W +M++GYAQ G +
Sbjct: 193 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSV 252
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EAL +F M AG P VT S+I G L LGK Y DN+ + ++L
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSL 312
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY KCG++ AR +F + +VSWT MI G AL+G EA LF ++ +++PN
Sbjct: 313 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 372
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TFLAVL AC+H G ++ GW + G + P L+H + +AD LGR G L EA +F
Sbjct: 373 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYG--FVPSLEHCAALADTLGRAGDLDEAYNF 430
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+ M IK + +W TLL AC++H N + E VA +F+LEP S +V ++N Y+ GRW
Sbjct: 431 ISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRW 490
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
+ A +R M+ +KK P S + K F A D+ H + ++D L ++S +
Sbjct: 491 NEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDR---IIDALNVYSEQ 546
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 210/461 (45%), Gaps = 42/461 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNN---LTFPFIAKACAKLSDLIYSQMIHG 78
W QIR A ++ + + LF QM+ + + P + + P K+CA L + +H
Sbjct: 15 WAYQIRMAASQGQFLHAISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 79 HIVKS------------------------PF----------VKCDRLDCAYKIFDEMAVR 104
++S PF ++ + K+FDEM R
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
D SWN +++G A+ + L + M G D T+ + + VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ I G D DV V ++ I YA C + + VF + V WNSM+AG
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSD--CDAVLWNSMLAGYAQNGS 251
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+++L +R M+ G R T SL+ +F L G+ +H++ I F+ ++ + ++
Sbjct: 252 VEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSS 311
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MY KCG++D AR +F+GI VSWTAMI GYA G EA LF ME P+
Sbjct: 312 LIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPN 371
Query: 345 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+T L++++ C +G ++ G K+F++ + G ++ C AL D + G + +A
Sbjct: 372 HITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFI 431
Query: 404 YALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ K S W+T++ C ++ V A ++ ++ EL+ +
Sbjct: 432 SEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPK 472
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%)
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+S R +FD + +R VSW +I G A+ EAL + M G +PD T+ +++
Sbjct: 121 ESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 180
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+ ++ G YA G ++V V ++LIDMY+ C + + ++F + + V W
Sbjct: 181 AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWN 240
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+M+AG A NG EAL +F ++++ +RP VTF +++ A + L G
Sbjct: 241 SMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 26/181 (14%)
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAA----GELPDLVTVLSMISGCGQSGALELGKWF 367
SW I A +G A+ LF M A+ +P ++ + + C G L
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVP--ASLPAALKSCAGLGLCTLAASL 71
Query: 368 DNYACSGGLKDNVMVCNALIDM----------YSKCGSIGDA----------RELFYALP 407
A G + NAL+++ + G G+ R++F +
Sbjct: 72 HALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEML 131
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
E+ VSW T+I GCA + EAL + ++ P+ T VL +++G
Sbjct: 132 ERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMV 191
Query: 468 I 468
+
Sbjct: 192 V 192
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 188/632 (29%), Positives = 297/632 (46%), Gaps = 80/632 (12%)
Query: 71 IYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++ +M H + V S +VK L A K+FD M R +W ++ G++Q+ +
Sbjct: 69 LFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEA 128
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LF M+ G + D+VT + L + + + V + I +G D+ + V NT + S
Sbjct: 129 FELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDS 188
Query: 186 YAKCDDLKMAELVFCGIEE----------------------------RLRTVVSWNSMVA 217
Y K + L +A +F + E ++T WN V+
Sbjct: 189 YCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVS 248
Query: 218 ---------------------------GCTYG---------DKFDDSLNFYRHMMYNGF- 240
G +Y K + + +R + + F
Sbjct: 249 NALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFD 308
Query: 241 --RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ T++S+ S+ + E GR +H+ I D ++ V N+L+ MY+KCG + A
Sbjct: 309 RKQFPFATMLSIASNTLDWE---MGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEA 365
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
++F + R+ V WTAMIS Y QKG +E L+LF M A + D T S++
Sbjct: 366 EMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASI 425
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
+L LGK ++ G NV +AL+D+Y+KCGSI DA + F +P++ +VSW MI
Sbjct: 426 ASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMI 485
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKG 477
+ A NGE L F +++ L+P+ V+FL VL AC+H+G +E+G W + + K
Sbjct: 486 SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYK- 544
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
+P +HY+ + D+L R G+ EA + MPI D +W ++L AC+IH N E+
Sbjct: 545 --LDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARR 602
Query: 538 VAYCLFKLEP-HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A LF +E AAPYV M+N YA G+W+ V+ + M+ VKK P S I +T
Sbjct: 603 AADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHET 662
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F+A DR H + E +D L E Y
Sbjct: 663 HMFSANDRCHPQIEEIRKKIDMLTKTMEELGY 694
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 193/405 (47%), Gaps = 32/405 (7%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAK--LSDLIYSQMIHGHIVKSPFV------------ 86
LF++M + D +F F A CA L D++ Q IH ++K+ FV
Sbjct: 201 LFKEMPEID------SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDF 254
Query: 87 --KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI---QADF 141
K D + A K+FDEM +D S+N ++ G+A G + LF ++ Q F
Sbjct: 255 YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF 314
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T++ + A + + + +H+ I D+++ V N+ + YAKC + AE++F
Sbjct: 315 ATMLSI---ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTN 371
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ R+ V W +M++ +++ L + M D T SLL + +L
Sbjct: 372 LTH--RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLS 429
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G+ +HS I GF +V + L+ +Y+KCG I A F + DR VSW AMIS YA
Sbjct: 430 LGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYA 489
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNV 380
Q G+ + L+ F M +G PD V+ L ++S C SG +E G W F++ L
Sbjct: 490 QNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRR 549
Query: 381 MVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+++DM + G +A +L +P + + W++++ C ++
Sbjct: 550 EHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIH 594
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 151/365 (41%), Gaps = 80/365 (21%)
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
N ++ GF D + + +F+ L Q R + H + N +IS Y
Sbjct: 33 NIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHK----NTVSTNMMISGY 88
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
K G++ AR LFDG+ +RT V+WT +I GY+Q EA LF M+ G PD VT +
Sbjct: 89 VKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFV 148
Query: 350 SMISGCG-----------QSGALELG---------KWFDNYACSG--------------- 374
+++SGC Q+ ++LG D+Y S
Sbjct: 149 TLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI 208
Query: 375 -------------GLKDNVM------------------VCNALIDMYSKCGSIGDARELF 403
GL D V+ V NAL+D YSK S+ DAR+LF
Sbjct: 209 DSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLF 268
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+PE+ VS+ +I+G A +G+ A DLF +L + F +L ++T E
Sbjct: 269 DEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWE 328
Query: 464 KGWAI---SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
G I +I+ D I + + D+ + GK +EA ++ +S A W
Sbjct: 329 MGRQIHAQTIVTTADSEILVG------NSLVDMYAKCGKFEEAEMIFTNLTHRS-AVPWT 381
Query: 521 TLLCA 525
++ A
Sbjct: 382 AMISA 386
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 11 NRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL 70
N +RS+ W + I V K + L LF +M+Q + + TF + +A A ++ L
Sbjct: 371 NLTHRSAV--PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 428
Query: 71 IYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
+ +H I+KS F+ KC + A + F EM R++ SWNAM+ +
Sbjct: 429 SLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAY 488
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
AQ G E L+ F M L G+Q D V+ +G+ A H+
Sbjct: 489 AQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 526
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 281/568 (49%), Gaps = 41/568 (7%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
++ MI+G + K + A ++F +M RD SWN M+ +Q GF L F
Sbjct: 183 WNSMIYG------YSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLE 236
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M G + + +T + A L +H+ + + DV I YAKC
Sbjct: 237 MWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGR 296
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
L+ A VF G+ E VSW S++ G +++L + M D T+ ++L
Sbjct: 297 LESARQVFDGLTEH--NAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVL 354
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI---------------- 295
+ + + G +H+H I G D V V N L++MY+KCGD+
Sbjct: 355 GVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDII 414
Query: 296 ---------------DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
+ AR FD + +R +SW +M++ Y Q+G +E L+++ M G
Sbjct: 415 SWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREG 474
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D +T + IS C L LG A G NV V N+++ MYS+CG I +A+
Sbjct: 475 VKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQ 534
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++F ++ K +VSW M+AG A NG+ + +++F +++ + P+++++++VL C+H+G
Sbjct: 535 KMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSG 594
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
F+ +G + D GIS P +H+ CM DLLGR G+L++A + + MP K +A IWG
Sbjct: 595 FVSEGQYYFLSMTKDHGIS--PMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWG 652
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
LL AC+IH N ++ E L +L+ Y +AN Y+ G+ GV N+R +M+
Sbjct: 653 ALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKG 712
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAE 608
V+K PG S ++ + FT +D H +
Sbjct: 713 VRKNPGCSWIEVDNRVHVFTVDDTNHPQ 740
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 237/509 (46%), Gaps = 53/509 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I +TL F +M PN++T+ + AC + DL + +H IV
Sbjct: 214 WNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIV 273
Query: 82 K-SP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ P + KC RL+ A ++FD + + SW +++ G AQ GF E L
Sbjct: 274 RMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALV 333
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF MR V + +D T+ + + K +S+ + +H+ I G+D+ V V N ++ YA
Sbjct: 334 LFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYA 393
Query: 188 KCDDLKMAELVF--------------------CGIEERL---------RTVVSWNSMVAG 218
KC D+ A F G E+ R V+SWNSM+A
Sbjct: 394 KCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLAT 453
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+++ L Y M+ G + D T + +S+ L+ G + + GF +
Sbjct: 454 YMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSN 513
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
VSV N++++MYS+CG I+ A+ +F I + VSW AM++GYAQ G + + +F M
Sbjct: 514 VSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLN 573
Query: 339 AGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLK--DNVMVCNALIDMYSKCGS 395
G +PD ++ +S++SGC SG + G+ +F + G+ VC ++D+ + G
Sbjct: 574 IGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVC--MVDLLGRAGQ 631
Query: 396 IGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR-PNRVTFLAVL 453
+ A+ L +P K + W ++A C ++G A L+ELD P LA +
Sbjct: 632 LEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANI 691
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ +G ++ + + DKG+ NP
Sbjct: 692 Y--SESGKIQGVTNVRKLM-RDKGVRKNP 717
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 235/540 (43%), Gaps = 94/540 (17%)
Query: 62 KACAKLSDLIYSQMIHGHIV-----KSPFVK---------CDRLDCAYKIFDEMAVRDVA 107
K CA L + ++ +H ++ S F++ C + AY++F + +V
Sbjct: 12 KECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVY 71
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV---TVM------GLTQAAIHAK--- 155
SWN M+ GFA G + +LF M + D V ++M G +A I A
Sbjct: 72 SWNTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATIKASGSL 127
Query: 156 -HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC-------------- 200
+L L +H F D V + + Y KC + A+ VFC
Sbjct: 128 GYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMI 187
Query: 201 -------GIEERL--------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
+++ L R VSWN+M++ + ++LN + M GFR +
Sbjct: 188 YGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSM 247
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+LS+ L G +H+ + LDV LI MY+KCG ++SAR +FDG+
Sbjct: 248 TYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL 307
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ VSWT++I G AQ G +EAL LF M D T+ +++ C + +G+
Sbjct: 308 TEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGE 367
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSI----------------------------G 397
+ + GL +V V NAL+ MY+KCG + G
Sbjct: 368 QLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAG 427
Query: 398 D---ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
D ARE F +PE+ V+SW +M+A G + E L ++ Q++ ++ + +TF +
Sbjct: 428 DVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSIS 487
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC L G I + Q + G S N + + + + R G+++EA S+ +K+
Sbjct: 488 ACADLAVLILGNQI-LAQAEKLGFSSNVSVAN--SVVTMYSRCGQIEEAQKMFSSIVMKN 544
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 46/196 (23%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GLK ++ + N L++MYS CG I DA +F + V SW TMI+G A +G+ EA LF
Sbjct: 34 GLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLF 93
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEK--------GWAISIIQYD------DKGI-- 478
++ E D V++ +++ H G LE G+ +Q D GI
Sbjct: 94 EKMPERD----SVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDT 149
Query: 479 -------------------------SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
+ NP L ++ M + G +K+AL+ MP +
Sbjct: 150 CVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMP-E 208
Query: 514 SDAGIWGTLLCACKIH 529
D W T++ H
Sbjct: 209 RDTVSWNTMISILSQH 224
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 291/575 (50%), Gaps = 74/575 (12%)
Query: 71 IYSQMIHGHIVKSPFVK-------CDR----LDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
I+S+ I I+ +P ++ C R + A ++FD + V SWN M G++++
Sbjct: 33 IHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRI 92
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ + L+ M ++ D T L + + L L + +H + G+D++V
Sbjct: 93 ACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAH 152
Query: 180 NTWISSYAKCDDLKMAELVF---CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
N I+ Y+ C + MA +F C + VV+WN+M++G
Sbjct: 153 NALINMYSLCGLIDMARGIFDMSCKSD-----VVTWNAMISG------------------ 189
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
YN + DV + ++++ FV NT G +D
Sbjct: 190 YNRIKKDVISWTAIVTGFV---------------------------NT--------GQVD 214
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+AR F + +R VSWTAMI GY + EAL LF M+ + PD T++S+++ C
Sbjct: 215 AARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACA 274
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
Q GALELG+W Y +K++ V NALIDMY KCG++ A +F LP++ +WT
Sbjct: 275 QLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTA 334
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
M+ G A+NG EAL++F Q+++ + P+ VT++ VL ACTHTG +++G
Sbjct: 335 MVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARH 394
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
GI P + HY CM DLLG+ G LKEA + +++MP+K ++ +WG LL AC+IH + E+ E
Sbjct: 395 GIE--PNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAE 452
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
+ +LEP++ A YV N YA +WD + +R +M +KK PG SL +NG
Sbjct: 453 RAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIV 512
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
F A D+ H +++ Y L+ + + YS +
Sbjct: 513 HEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPN 547
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 135/330 (40%), Gaps = 56/330 (16%)
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARVLFDGICDR 308
LS F +++ + +HS I G + + N ++S + GD+ AR LFD I +
Sbjct: 18 LSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEP 77
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+ SW M GY++ + L+ M PD T + G +S AL+LG+
Sbjct: 78 SVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELH 137
Query: 369 NYACSGGLKDNVMVCNALIDMYSKC----------------------------------- 393
+ GL NV NALI+MYS C
Sbjct: 138 CHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDV 197
Query: 394 -------------GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
G + AR+ F+ +PE+ VSWT MI G + EAL LF ++
Sbjct: 198 ISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTS 257
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
++P+ T ++VL AC G LE G W I Y DK N + + D+ + G
Sbjct: 258 KIKPDEFTMVSVLTACAQLGALELGEW---IRTYIDKNKVKNDTFVG-NALIDMYFKCGN 313
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ AL ++P + D W ++ I+
Sbjct: 314 VEMALSIFNTLP-QRDKFTWTAMVVGLAIN 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 16/213 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + N + L+LFR+M+ + I+P+ T + ACA+L L + I +I
Sbjct: 231 WTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYID 290
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC ++ A IF+ + RD +W AM+VG A G E L
Sbjct: 291 KNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALN 350
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH-SFGIHIGVDADVSVCNTWISSY 186
+F M + D VT +G+ A H + K S G++ +++ +
Sbjct: 351 MFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLL 410
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
K LK A + + + ++V W +++ C
Sbjct: 411 GKAGHLKEAHEIIKNMPMKPNSIV-WGALLGAC 442
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 250/483 (51%), Gaps = 5/483 (1%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L Q+ I K + K +H+ G D + ++ Y CD L A L+F I +
Sbjct: 81 LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKH- 139
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ WN ++ G + ++ ++ Y M G D T +L + A+ GR +
Sbjct: 140 -NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H H + G++ DV V LI MY+KCG + SAR +FD I R V W +M++ Y+Q G
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
D L L M G P T+++ IS + AL G+ + + + V AL
Sbjct: 259 DACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTAL 318
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+KCGS+ AR LF L K VVSW MI G A++G EALDLF ++ + +P+
Sbjct: 319 VDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDH 377
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TF+ VL AC+H G LE+GW D I +P + HY+CM DLLG G+L EA +
Sbjct: 378 ITFVGVLSACSHGGLLEEGWMFFETMIRDYKI--DPTVQHYTCMVDLLGHSGRLDEAYNL 435
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+ M + D+G+WG LL +CKIH N+E+GE L +LEP A YV ++N YA G+W
Sbjct: 436 IMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKW 495
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
+GVA +R +M ++KK S + K F + D H S+ Y L+ + +E
Sbjct: 496 EGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEA 555
Query: 627 AYS 629
YS
Sbjct: 556 GYS 558
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 163/358 (45%), Gaps = 9/358 (2%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
CD L A +FD + ++ WN ++ G+A G E ++L+Y M G+ D T +
Sbjct: 123 CDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFV 182
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+A + + +H + G + DV V I YAKC + A VF I +R
Sbjct: 183 LKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI--LVR 240
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V WNSM+A + D L+ M+ G R T+V+ +S+ AL QGR +H
Sbjct: 241 DAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELH 300
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
F+ V L+ MY+KCG + AR LF+ + + VSW AMI+GYA G
Sbjct: 301 GLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHAT 360
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNAL 386
EAL LF M + PD +T + ++S C G LE G +F+ + V +
Sbjct: 361 EALDLFEEMNRVAK-PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCM 419
Query: 387 IDMYSKCGSIGDARELFY---ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+D+ G + +A L LP+ V W ++ C ++ +L+EL+
Sbjct: 420 VDLLGHSGRLDEAYNLIMQMKVLPDSGV--WGALLNSCKIHANVELGEIALERLIELE 475
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ SLL S + +A+ G+ +H+ GF D + L+++Y C + SAR+LFD
Sbjct: 76 SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I W +I GYA G + A++L++ M G +PD T ++ C A+E G
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ + G + +V V ALIDMY+KCG +G ARE+F + + V W +M+A + N
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQN 255
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G L L +++ LRP T + + A L +G + G+S+ E
Sbjct: 256 GHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGREL-------HGLSWRQEF 308
Query: 485 DHY----SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + + + D+ + G ++ A + + + +K W ++ +H
Sbjct: 309 ESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVS-WNAMITGYAMH 356
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 151/360 (41%), Gaps = 54/360 (15%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR + L+ QM + P+N TFPF+ KACA LS + + + IH H+V
Sbjct: 144 WNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVV 203
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A ++FD++ VRD WN+ML ++Q G + L
Sbjct: 204 QTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLS 263
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M L G++ T++ A+ L + +H ++ V + YA
Sbjct: 264 LCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYA 323
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC +++A +F ERL + VVSWN+M+ G ++L+ + M + D
Sbjct: 324 KCGSVRVARNLF----ERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHI 378
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T V +LS A G L+ + + T+I Y
Sbjct: 379 TFVGVLS------ACSHGGLLEEGWMFF---------ETMIRDYK--------------- 408
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
D T +T M+ G LDEA L M+ LPD ++++ C +ELG+
Sbjct: 409 IDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKV---LPDSGVWGALLNSCKIHANVELGE 465
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P S++ C A++ GK C G + ++ L+++Y C S+ AR L
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F +P+ + W +I G A NG + A+ L++Q+ + L P+ TF VL+AC +
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 463 EKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
E G I ++Q + ++ + + D+ + G + A + + ++ DA +W
Sbjct: 193 EHGREIHEHVVQ-----TGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLWN 246
Query: 521 TLLCA 525
++L A
Sbjct: 247 SMLAA 251
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/633 (29%), Positives = 318/633 (50%), Gaps = 34/633 (5%)
Query: 22 WNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I A N + LLL R+M + PN +F I +C S L ++ IH +
Sbjct: 200 WNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARV 259
Query: 81 VKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ F+ +C +D + +F+ MAVR+ SWNAM+ FAQ G
Sbjct: 260 EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAF 319
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS--VHSFGIHIGVDADVSVCNTWIS 184
+++ M+ G + + +T + +AA + L +S +H + G++ DV V ++
Sbjct: 320 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 379
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD--KFDDSLNFYRHMMYNGFRL 242
Y + A F I + +VSWN+M+ YGD + +++ + M
Sbjct: 380 MYGSTGAIDRARAAFDAIPAK--NIVSWNAMLTA--YGDNGRAREAMELFAAMKRQSL-- 433
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVL 301
VS L+ C E + + R +H+ + G F + S+ N ++ M+++ G ++ A
Sbjct: 434 -APNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAA 492
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + VSW ++ + + DL A+ F+ M+ G PD T++S++ C G L
Sbjct: 493 FDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTL 552
Query: 362 ELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGS-IGDARELFYALPE--KIVVSWTTM 417
ELG+ + ++ +V+V +A+++M +KCGS + + LF +P+ K +V+W TM
Sbjct: 553 ELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTM 612
Query: 418 IAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
IA A +G +AL LF + + +RP+ TF++VL C+H G +E G + +
Sbjct: 613 IAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVL 672
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
GI P ++HY+C+ D+LGR G L+EA DF++ MP+ +D+ +W +LL AC + ++E GE
Sbjct: 673 GIEQQP-VEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGE 731
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK-FPGQSLFHINGK 595
A +L + YV ++N YA GRW+ +R M +VKK PG+S + +
Sbjct: 732 RAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNR 791
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F A DR H +S+ Y L+ L RE Y
Sbjct: 792 VHEFFARDRSHPQSDEIYAELERLKGLIREAGY 824
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 226/513 (44%), Gaps = 45/513 (8%)
Query: 43 RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKC 88
R K +D T + + C +DL + +H IVK + KC
Sbjct: 13 RSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC 72
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD------FV 142
LD A F + R +A+WN ++ A V L+ M+L + +
Sbjct: 73 RSLDDANAAFSALRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNRLTII 129
Query: 143 TVMGLTQAA---IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
V+G + + + + VH ++ D+ V + +Y KC ++ A VF
Sbjct: 130 AVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVF 189
Query: 200 CGIEERLRTVVSWNSMVAGCTYGD-KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
I+ + ++ WN+ + C D + D +L R M G + + V++LSS
Sbjct: 190 SRIQ--VPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHS 247
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
+L R +H+ GF DV V L++MY +CG +D + +F+ + R VSW AMI+
Sbjct: 248 SLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIA 307
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK--WFDNYACSGGL 376
+AQ G A +++ M+ G P+ +T ++ + S + +LG+ + GL
Sbjct: 308 AFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGL 367
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ +VMV AL+ MY G+I AR F A+P K +VSW M+ NG EA++LF
Sbjct: 368 EGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAA 427
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD---- 492
+ L PN+V++LAVL C +S + + N S +A+
Sbjct: 428 MKRQSLAPNKVSYLAVLGCCED---------VSEARSIHAEVVGNGLFAQESSIANGVVR 478
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ R G L+EA+ + +K D+ W T + A
Sbjct: 479 MFARSGSLEEAMAAFDATVVK-DSVSWNTKVAA 510
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 21/255 (8%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ I WN+ + + A + + LF MK+ + PN +++ + C +S+ ++
Sbjct: 399 AKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---ARS 455
Query: 76 IHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH +V + F + L+ A FD V+D SWN + +
Sbjct: 456 IHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSARE 515
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSV-HSFGIHIGVDADVSVC 179
L + FY M+ G + D T++ + L L +S+ I V+ DV V
Sbjct: 516 DLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVE 575
Query: 180 NTWISSYAKC-DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY- 237
+ ++ AKC + E +F + + + +V+WN+M+A +L +R M
Sbjct: 576 SAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQR 635
Query: 238 NGFRLDVTTVVSLLS 252
+ R D +T VS+LS
Sbjct: 636 SSVRPDSSTFVSVLS 650
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 256/444 (57%), Gaps = 7/444 (1%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I+ Y+K D+ A +F G+ R T SWNSM+A +G ++ ++L +R M+ G
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVRR--TSASWNSMIACYAHGGEYQEALRLFRRMLSEG 212
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSA 298
R + T+ ++ S L G+ S + DL +++T L+ MY KC ID A
Sbjct: 213 ARPNAITIATMFSICAKTGDLETGKWARS--LIAEQDLQNMIVHTALMEMYVKCQAIDEA 270
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R FD + R V+W+ MI+GYAQ G E+L LF M+A P+ VT++ ++S C Q
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQL 330
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
G+ ELG ++ S L + +ALIDMY+KCG +G AR +F + K+V++W +M+
Sbjct: 331 GSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMM 390
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
G ALNG +A+ L+ ++ E D++PN +TF+A+L ACTH G +++G +S +
Sbjct: 391 RGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQG--MSFFKEMKTIH 448
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
+P+++H +C+ DLL + G+L+EA F+ M ++ +A IW TLL AC+ H ++E+ +
Sbjct: 449 HVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLA 508
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L LEP +++ YV ++N YA G W V IR +M+ V+K S ++G+
Sbjct: 509 ASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHK 568
Query: 599 FTAEDRYHAESELTYPVLDCLALH 622
F +D YH +S + V+D + LH
Sbjct: 569 FLVQDTYHPKSAEIFNVVDGMGLH 592
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 128/238 (53%), Gaps = 32/238 (13%)
Query: 262 QGRLVHSHGIHYGF------------------DLDVSV-------------INTLISMYS 290
QG+ VH H I G D+D +V +N LI+ YS
Sbjct: 103 QGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYS 162
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
K GD+ AR LFDG+ RT SW +MI+ YA G+ EALRLF M + G P+ +T+ +
Sbjct: 163 KSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIAT 222
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
M S C ++G LE GKW + L+ N++V AL++MY KC +I +AR F + ++
Sbjct: 223 MFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCQAIDEARREFDRMQQRD 281
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
VV+W+TMIAG A NG E+L+LF ++ +PN VT + VL AC G E G I
Sbjct: 282 VVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQI 339
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 180/423 (42%), Gaps = 52/423 (12%)
Query: 46 KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH----------IVKSPFV----KCDRL 91
+ +D+ P P + K+CA L+ + +H H V++ V K +
Sbjct: 79 RGSDVPPG--CVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDM 136
Query: 92 DCAYKIFDEMAVRDV-------------------------------ASWNAMLVGFAQMG 120
DCA K+FDEM V+D ASWN+M+ +A G
Sbjct: 137 DCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGG 196
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ LRLF M G + + +T+ + L K S + ++ V
Sbjct: 197 EYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHT 255
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ Y KC + A F +++ R VV+W++M+AG + +SL + M
Sbjct: 256 ALMEMYVKCQAIDEARREFDRMQQ--RDVVAWSTMIAGYAQNGRPHESLELFERMKATSC 313
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ + T+V +LS+ + G + SH L + + LI MY+KCG + AR
Sbjct: 314 KPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARS 373
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + + ++W +M+ G A G +A+ L+ M P+ +T +++++ C +G
Sbjct: 374 VFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGL 433
Query: 361 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMI 418
++ G +F + V C ++D+ K G + +A + + E V W+T++
Sbjct: 434 VDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLL 493
Query: 419 AGC 421
+ C
Sbjct: 494 SAC 496
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 162/402 (40%), Gaps = 57/402 (14%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL------- 70
T WNS I + E + L LFR+M PN +T + CAK DL
Sbjct: 181 TSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR 240
Query: 71 --IYSQMIHGHIVKSP----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
I Q + IV + +VKC +D A + FD M RDV +W+ M+ G+AQ G
Sbjct: 241 SLIAEQDLQNMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHE 300
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L LF M+ + + VT++G+ A L + S + + + I
Sbjct: 301 SLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALID 360
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC + A VF +E ++ V++WNSM+ G D++ Y+ M + +
Sbjct: 361 MYTKCGHVGRARSVFNRMEHKV--VITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNE 418
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFD 303
T V+LL++ H G D +S + +++ ++ + D
Sbjct: 419 ITFVALLTACT----------------HAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVD 462
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+C + G L EA + ME P+ V +++S C +EL
Sbjct: 463 LLC---------------KSGRLREAYKFICDMEVE---PNAVIWSTLLSACRAHADVEL 504
Query: 364 GKWFDNYACSGGL---KDNVMVCNALIDMYSKCGSIGDAREL 402
K A S L DN + L ++Y+ G GD RE+
Sbjct: 505 AK----LAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREI 542
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 84/211 (39%), Gaps = 32/211 (15%)
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+AR LFD + T +IS ++ E L F ++ G V ++ C
Sbjct: 37 AARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCA 96
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDM--------------------------- 389
A GK +A GL ++ V AL+D
Sbjct: 97 ILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNC 156
Query: 390 ----YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
YSK G + AR LF + + SW +MIA A GE+ EAL LF +++ RPN
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 446 RVTFLAVLQACTHTGFLEKG-WAISIIQYDD 475
+T + C TG LE G WA S+I D
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQD 247
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 272/550 (49%), Gaps = 25/550 (4%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA--A 151
A +FDEM RDV +W AML G+A G L LF M G+ + T+ + A
Sbjct: 22 ARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVLTACRG 81
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL----- 206
A S+H+ + GVD V N I +YA C++ G+EE
Sbjct: 82 GAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEE-------GVGVEESRKLFDA 134
Query: 207 ----RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
RT SW SMVAG + + L ++ M+ +G L T L + L
Sbjct: 135 LGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCV 194
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H + F+ +++V N+LI MY C ++ AR LFD I +R V+W MI+ Y+Q
Sbjct: 195 GQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQ 254
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
L AL+L M P+ T+ S+ S C +L G+ A ++ +
Sbjct: 255 CNHL-MALQLLREMNLQ---PNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQM 310
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
CNAL+DMYSKCGSI +A+++F + K +SWT+MI G +NG E++ LF ++ +
Sbjct: 311 CNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGV 370
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
P+ V FL ++ AC H G +++GW + + N E+ Y C+ +LL R G+L+E
Sbjct: 371 HPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEI--YGCVTNLLARAGRLRE 428
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A D + MP D +WG LL ACK+H N+E+G A + ++ P A YV +AN YA
Sbjct: 429 AFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDRAKTYVLLANIYAA 488
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
G +W A+ R +++ +K G S + K +FT D + L VL LA H
Sbjct: 489 GNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADSSSPQVSLADEVLQILARH 548
Query: 623 SREE-AYSSH 631
E A SSH
Sbjct: 549 MHEALADSSH 558
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 205/437 (46%), Gaps = 30/437 (6%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLS-------DLIYSQMIHGHIVKSPFV----- 86
L LFR+M + PN T + AC + +++ + + P+V
Sbjct: 54 LDLFRRMLAAGVGPNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALI 113
Query: 87 ----KCDR---LDCAYKIFDEMAV-RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
C+ ++ + K+FD + R ASW +M+ G+++ G + L+LF M GI+
Sbjct: 114 EAYASCEEGVGVEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIE 173
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
T A +L + + +H + +A+++V N+ I Y C +L A +
Sbjct: 174 LSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRL 233
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F I E R +V+WN+M+A + + +L R M + + T+ S+ S+
Sbjct: 234 FDEIPE--RNLVTWNTMIAWYSQCNHL-MALQLLREM---NLQPNCFTLTSITSACAGLA 287
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
+L G+ VH + + D+ + N L+ MYSKCG I +A+ +F+ + + ++SWT+MI+
Sbjct: 288 SLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMIT 347
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLK 377
GY G +E+++LF +M AG PD V L +I C G ++ G +F + L+
Sbjct: 348 GYGMNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQ 407
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
N + + ++ ++ G + +A +L + +P W ++ C ++ +
Sbjct: 408 PNKEIYGCVTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARK 467
Query: 437 LMELDLRPNRVTFLAVL 453
++E++ P+R +L
Sbjct: 468 IIEIN--PDRAKTYVLL 482
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 12/222 (5%)
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
TLI G + AR +FD + DR V+WTAM+SGYA G AL LF M AAG P
Sbjct: 8 TLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGP 67
Query: 344 DLVTVLSMISGCGQSGALELG---KWFDNYACSGGLKDNVMVCNALIDMYSKCG---SIG 397
+ T+ S+++ C + GA + G A G+ V NALI+ Y+ C +
Sbjct: 68 NEFTLSSVLTAC-RGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVE 126
Query: 398 DARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
++R+LF AL + SWT+M+AG + G+ L LF +++ + + T L AC
Sbjct: 127 ESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHAC 186
Query: 457 THTGFLEKGWAISII----QYDDKGISYNPELDHYSCMADLL 494
L G + ++ ++ N +D Y A+LL
Sbjct: 187 ASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLL 228
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 20/248 (8%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T W S + + L LF+ M Q+ IE + T ACA +++L Q +H
Sbjct: 140 TAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLH 199
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
++ F C L A ++FDE+ R++ +WN M+ ++Q L
Sbjct: 200 VLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCNHLM 259
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L+L M L Q + T+ +T A L + VH + D+ +CN +
Sbjct: 260 -ALQLLREMNL---QPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNALV 315
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+KC + A+ +F ++ + + +SW SM+ G ++S+ + M++ G D
Sbjct: 316 DMYSKCGSIANAKKMFNMMDYKDK--LSWTSMITGYGMNGYANESIQLFTSMIHAGVHPD 373
Query: 244 VTTVVSLL 251
+ L+
Sbjct: 374 HVVFLGLI 381
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I N L+ + +++ +++PN T I ACA L+ L + Q +HG +
Sbjct: 245 WNTMIAWYSQCNH----LMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAAL 300
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC + A K+F+ M +D SW +M+ G+ G+ ++
Sbjct: 301 RRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQ 360
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF +M G+ D V +GL A H
Sbjct: 361 LFTSMIHAGVHPDHVVFLGLICACNHG 387
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 310/639 (48%), Gaps = 30/639 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ TI+ WN+ I ++ K L+F M+ + + P+ T + CA
Sbjct: 505 FDRMEEHDTIS-WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDH 563
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH ++S + +L A +F M+ RD+ SWN M+
Sbjct: 564 FSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISS 623
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ Q + L+ + + +T A L K VH+ + + + +
Sbjct: 624 YVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN 683
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V N+ I+ Y KC+ ++ AE VF + +VS+N ++ G + ++ + M
Sbjct: 684 LLVGNSLITMYGKCNSMEDAEKVFQSMPTH--DIVSYNVLIGGYAVLEDGTKAMQVFSWM 741
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
G + + T++++ SF L GR +H++ I GF D V N+LI+MY+KCG+
Sbjct: 742 RSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGN 801
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
++S+ +F+ I ++ VSW A+I+ Q G +EAL+LF M+ AG D V + +S
Sbjct: 802 LESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSS 861
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS- 413
C +LE G GL + V NA +DMY KCG + E+ +P++ +
Sbjct: 862 CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQ 918
Query: 414 --WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
W T+I+G A G F EA + F Q++ +P+ VTF+A+L AC+H G ++KG I
Sbjct: 919 QCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG----ID 974
Query: 472 QYDDKGISY--NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
Y+ S+ +P + H C+ DLLGR G+ EA F++ MP+ + IW +LL + + H
Sbjct: 975 YYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTH 1034
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+EIG A L +L+P + YV ++N YA RW V +R+ MK + K P S
Sbjct: 1035 KNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSW 1094
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ + TF DR H +E Y LD + L RE Y
Sbjct: 1095 LKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGY 1133
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 227/504 (45%), Gaps = 25/504 (4%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+ L +RQM+++ + N F + C L + + + ++ S
Sbjct: 430 EALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLI 489
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
F R+ A K+FD M D SWNAM+ ++ G +F +MR G++ D
Sbjct: 490 TMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDAT 549
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ L + H S +HS + +D+ V+V N ++ Y+ L AE +F +
Sbjct: 550 TLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 609
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R ++SWN+M++ D+L + + + T S L + P AL+
Sbjct: 610 SR--RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 667
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G++VH+ + ++ V N+LI+MY KC ++ A +F + VS+ +I GYA
Sbjct: 668 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 727
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVM 381
D +A+++F M +AG P+ +T++++ S L G+ Y G +
Sbjct: 728 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 787
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N+LI MY+KCG++ + +F ++ K +VSW +IA G EAL LF +
Sbjct: 788 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAG 847
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGK 499
+ +RV L +C LE+G +Q G+ + D Y A D+ G+ GK
Sbjct: 848 NKLDRVCLAECLSSCASLASLEEG-----MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 902
Query: 500 LKEALDFVQSMPIKSDAGIWGTLL 523
+ E L V I+ W TL+
Sbjct: 903 MDEMLQVVPDQAIRPQQ-CWNTLI 925
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 182/362 (50%), Gaps = 8/362 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVTVMGLTQA 150
A ++F EM R+V SW A++V + G+LE LR + MR G+ + F TV+ L
Sbjct: 400 AQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLC-G 458
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
++ + L V S I G+ VSV N+ I+ + + AE +F +EE +
Sbjct: 459 SLENEVPGL--QVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEH--DTI 514
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SWN+M++ ++ + M ++G R D TT+ SL+S + G +HS
Sbjct: 515 SWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLC 574
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ D V+VIN L++MYS G + A LF + R +SW MIS Y Q + +AL
Sbjct: 575 LRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDAL 634
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
+ + E P+ +T S + C GAL GK L+ N++V N+LI MY
Sbjct: 635 KTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMY 694
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KC S+ DA ++F ++P +VS+ +I G A+ + +A+ +F + ++PN +T +
Sbjct: 695 GKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMI 754
Query: 451 AV 452
+
Sbjct: 755 NI 756
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 188/421 (44%), Gaps = 14/421 (3%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA-- 154
+FDEMA R ++W + G + G + MR G+ + L A
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358
Query: 155 -KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ ++ ++H+ G+ +V + + Y + A+ +F + ER VVSW
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPER--NVVSWT 416
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT---TVVSLLSSFVCPEALVQGRLVHSHG 270
+++ + +++L YR M +G + TVVSL S E V G V S
Sbjct: 417 ALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSL---ENEVPGLQVASQV 473
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
I G VSV N+LI+M+ G + A LFD + + +SW AMIS Y+ +G +
Sbjct: 474 IVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCF 533
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
+F M G PD T+ S++S C S G + L +V V NAL++MY
Sbjct: 534 LVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMY 593
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
S G + DA LF+ + + ++SW TMI+ N +AL QL + PN +TF
Sbjct: 594 SAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFS 653
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
+ L AC+ G L G + I +S L + + + G+ +++A QSM
Sbjct: 654 SALGACSSPGALIDGKMVHAIVLQ---LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSM 710
Query: 511 P 511
P
Sbjct: 711 P 711
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 267/511 (52%), Gaps = 52/511 (10%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K++ LKS+H+ I + + + K +DL A L+F ++E + +N+
Sbjct: 25 KNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYL--YNA 82
Query: 215 MVAGCTYGDKFDDSLNFYRHMMY-------NGF---RLDVTTVVSLLSSFVCPEALVQGR 264
M+ T+ + ++ FY+ M+ N R V+ S VC G+
Sbjct: 83 MIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNL---GK 139
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR---------------- 308
VH+H +G ++++ N LI MY+KC + A +FDG+ +R
Sbjct: 140 QVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVG 199
Query: 309 ---------------TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
T VSWTAMISGY + G +AL +F M+ G PD ++++S++
Sbjct: 200 QMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLP 259
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C Q GALE+GKW Y GL +CNAL++MYSKCG IG A +LF + + V+S
Sbjct: 260 ACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVIS 319
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W+TMI G A +G+ EA++LF ++ + + PN +TFL +L AC H GF +G A +
Sbjct: 320 WSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLA----YF 375
Query: 474 DDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
D Y+ PE++HY C+ D+LGR G+L +ALD ++ MP+K D+ IWG+LL +C+ H N
Sbjct: 376 DSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSN 435
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
++I L +LEP YV ++N YA +WDGV+ +R ++K +KK PG SL
Sbjct: 436 LDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLID 495
Query: 592 INGKTCTFTAEDRYHAESELTYPVLDCLALH 622
IN F + D S + +L+ L H
Sbjct: 496 INNVVQEFVSWDDSKPFSRDIFWLLELLTSH 526
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 157/378 (41%), Gaps = 60/378 (15%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-------KQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+N+ IR + +L +++M +N I P+ TFPF+ K+C+ L +
Sbjct: 80 YNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGK 139
Query: 75 MIHGHIVK-SP-------------FVKCDRLDCAYKIFDEMAVRDVASWN---------- 110
+H H+ K P + KC L A+K+FD M RD SWN
Sbjct: 140 QVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVG 199
Query: 111 ---------------------AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
AM+ G+ ++G + L +F M++VG++ D ++++ +
Sbjct: 200 QMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLP 259
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A L + K +H + G+ S+CN + Y+KC + A +F + + V
Sbjct: 260 ACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSK--GDV 317
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHS 268
+SW++M+ G K +++ ++ M + T + LLS+ +G S
Sbjct: 318 ISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDS 377
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLD 327
Y + +V L+ + + G + A + + + + W +++S +LD
Sbjct: 378 MSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLD 437
Query: 328 EALRLFFAMEAAGEL-PD 344
A+ AME EL PD
Sbjct: 438 IAI---IAMEHLEELEPD 452
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI W + I L +FRQM+ +EP+ ++ + ACA+L L + IH
Sbjct: 215 TIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIH 274
Query: 78 ------GHIVKSP--------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G + K+ + KC + AY++FD+M+ DV SW+ M+ G A G
Sbjct: 275 MYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAR 334
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ LF M+ I+ + +T +GL A HA
Sbjct: 335 EAIELFKRMKKAKIEPNGITFLGLLSACAHA 365
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/595 (31%), Positives = 299/595 (50%), Gaps = 56/595 (9%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM-GFLENVLRLFYNMRLVGIQADFVT 143
+VK LD A+K+FDE+ ++ +W ++ GFA+ G E V LF M+ G + T
Sbjct: 77 YVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYT 136
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + + ++ K +H++ + GV DV + N+ + Y KC + + AE F +
Sbjct: 137 LSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMI 196
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH----------------------------- 234
E+ VVSWN M+ + SL +R+
Sbjct: 197 EK--DVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQL 254
Query: 235 --MMYNGFRLD-VTTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYS 290
M+ +G VT ++L+ V +LV+ GR +H + +G + D + ++L+ MY
Sbjct: 255 YCMVAHGTEFSPVTFSIALI--LVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYG 312
Query: 291 KCGDIDSARVL-------------FDGICDRTR---VSWTAMISGYAQKGDLDEALRLFF 334
KCG +D A + F C + VSW++M+SGY G ++ ++ F
Sbjct: 313 KCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFR 372
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
+M + D+ TV ++IS C +G LE GK Y GL+ + V ++LIDMYSK G
Sbjct: 373 SMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSG 432
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
S+ DA +F + E VV WT+MI+GCAL+G+ EA+ LF ++ L + PN VTF+ VL
Sbjct: 433 SLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLN 492
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+H G +E+G + D I NPE++HY+ M +L GR G L EA +F+ I
Sbjct: 493 ACSHVGLIEEGCRYFRMMKDTYHI--NPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISH 550
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
+W + L +C++H N +G+ V+ L + P Y+ ++N + +WD A +R+
Sbjct: 551 FTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRS 610
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
+M + VKK PGQS + + +FT DR H + + Y LD L +E YS
Sbjct: 611 LMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYS 665
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 201/451 (44%), Gaps = 67/451 (14%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
LFR+M+ + PN T + K C++ +++ + + IH I+++ ++
Sbjct: 121 LFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYL 180
Query: 87 KCDRLDCAYKIFDEM-------------------------------AVRDVASWNAMLVG 115
KC + A F+ M +DV SWN ++ G
Sbjct: 181 KCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDG 240
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL---KSVHSFGIHIGV 172
Q G+ L Y M G + VT + A I LSL+ + +H + G+
Sbjct: 241 LIQCGYERLALEQLYCMVAHGTEFSPVT---FSIALILVSSLSLVEVGRQLHGRVLTFGL 297
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGI--------------EERLRTVVSWNSMVAG 218
++D + ++ + Y KC + A + + +E +VSW+SMV+G
Sbjct: 298 NSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSG 357
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ K++D + +R M+ +D+ TV +++S+ L G+ +H++ G +D
Sbjct: 358 YVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRID 417
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V ++LI MYSK G +D A ++F+ I + V WT+MISG A G EA+ LF M
Sbjct: 418 AYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLN 477
Query: 339 AGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G +P+ VT + +++ C G +E G ++F + + V +++++Y + G +
Sbjct: 478 LGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLI 537
Query: 398 DARELFYALPEKIVVS-WTTMIAGCALNGEF 427
+A+ + S W + ++ C L+ F
Sbjct: 538 EAKNFIFENSISHFTSVWRSFLSSCRLHKNF 568
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
+S P +L R +H H G ++ N L+++Y K ++D A LFD I +
Sbjct: 43 TSIGSPPSL---RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQ 99
Query: 312 SWTAMISGYAQK-GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
+WT +ISG+A+ G + LF M+A G P+ T+ S++ C + ++ GK +
Sbjct: 100 TWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAW 159
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
G+ +V++ N+++D+Y KC A F + EK VVSW MI G+ ++
Sbjct: 160 ILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKS 219
Query: 431 LDLFHQLMELDL 442
L++F D+
Sbjct: 220 LEMFRNFPNKDV 231
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 182/429 (42%), Gaps = 76/429 (17%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
L+++H G ++ N ++ Y K +L A +F I + +W +++G
Sbjct: 51 LRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK--NTQTWTILISGF 108
Query: 220 TYGDKFDD-SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ + +R M +G + T+ S+L + G+ +H+ + G D
Sbjct: 109 ARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGD 168
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V + N+++ +Y KC + + A F+ + ++ VSW MI Y ++GD++++L +F
Sbjct: 169 VVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPN 228
Query: 339 AGELPDLVTVLSMISGCGQSG-----------------------------------ALEL 363
D+V+ ++I G Q G +E+
Sbjct: 229 ----KDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEV 284
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL----------------P 407
G+ + GL + + ++L++MY KCG + A + + P
Sbjct: 285 GRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEP 344
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFH----QLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ +VSW++M++G NG++ + + F +L+ +D+R T ++ AC + G LE
Sbjct: 345 KARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR----TVATIISACANAGILE 400
Query: 464 KGWAI-SIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
G I + IQ +D Y S + D+ + G L +AL + + + + +W
Sbjct: 401 FGKQIHAYIQ------KIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWT 453
Query: 521 TLLCACKIH 529
+++ C +H
Sbjct: 454 SMISGCALH 462
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 141/339 (41%), Gaps = 34/339 (10%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R + + + WN+ I + L M + E + +TF + LS +
Sbjct: 224 RNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVE 283
Query: 72 YSQMIHGHI----------VKSPFV----KCDRLDCAYKIFDEMAVR------------- 104
+ +HG + ++S V KC R+D A I ++ +
Sbjct: 284 VGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKE 343
Query: 105 ---DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
+ SW++M+ G+ G E+ ++ F +M I D TV + A +A L K
Sbjct: 344 PKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGK 403
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
+H++ IG+ D V ++ I Y+K L A ++F I+E VV W SM++GC
Sbjct: 404 QIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE--PNVVLWTSMISGCAL 461
Query: 222 GDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVS 280
+ ++++ + M+ G + T V +L++ + +G R Y + +V
Sbjct: 462 HGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVE 521
Query: 281 VINTLISMYSKCGD-IDSARVLFDGICDRTRVSWTAMIS 318
+++++Y + G I++ +F+ W + +S
Sbjct: 522 HYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 256/444 (57%), Gaps = 7/444 (1%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I+ Y+K D+ A +F G+ R T SWNSM+A +G ++ ++L +R M+ G
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVRR--TSASWNSMIACYAHGGEYQEALRLFRRMLSEG 212
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSA 298
R + T+ ++ S L G+ S + DL +++T L+ MY KC ID A
Sbjct: 213 ARPNAITIATMFSICAKTGDLETGKWARS--LIAEQDLQNMIVHTALMEMYVKCRAIDEA 270
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R FD + R V+W+ MI+GYAQ G E+L LF M+A P+ VT++ ++S C Q
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQL 330
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
G+ ELG ++ S L + +ALIDMY+KCG +G AR +F + K+V++W +M+
Sbjct: 331 GSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMM 390
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
G ALNG +A+ L+ ++ E D++PN +TF+A+L ACTH G +++G +S +
Sbjct: 391 RGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQG--MSFFKEMKTIH 448
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
+P+++H +C+ DLL + G+L+EA F+ M ++ +A IW TLL AC+ H ++E+ +
Sbjct: 449 HVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLA 508
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L LEP +++ YV ++N YA G W V IR +M+ V+K S ++G+
Sbjct: 509 ASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHK 568
Query: 599 FTAEDRYHAESELTYPVLDCLALH 622
F +D YH +S + V+D + LH
Sbjct: 569 FLVQDTYHPKSAEIFNVVDGMGLH 592
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 128/238 (53%), Gaps = 32/238 (13%)
Query: 262 QGRLVHSHGIHYGF------------------DLDVSV-------------INTLISMYS 290
QG+ VH H I G D+D +V +N LI+ YS
Sbjct: 103 QGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYS 162
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
K GD+ AR LFDG+ RT SW +MI+ YA G+ EALRLF M + G P+ +T+ +
Sbjct: 163 KSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIAT 222
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
M S C ++G LE GKW + L+ N++V AL++MY KC +I +AR F + ++
Sbjct: 223 MFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCRAIDEARREFDRMQQRD 281
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
VV+W+TMIAG A NG E+L+LF ++ +PN VT + VL AC G E G I
Sbjct: 282 VVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQI 339
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 180/423 (42%), Gaps = 52/423 (12%)
Query: 46 KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH----------IVKSPFV----KCDRL 91
+ +D+ P P + K+CA L+ + +H H V++ V K +
Sbjct: 79 RGSDVPPG--CVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDM 136
Query: 92 DCAYKIFDEMAVRDV-------------------------------ASWNAMLVGFAQMG 120
DCA K+FDEM V+D ASWN+M+ +A G
Sbjct: 137 DCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGG 196
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ LRLF M G + + +T+ + L K S + ++ V
Sbjct: 197 EYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHT 255
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ Y KC + A F +++ R VV+W++M+AG + +SL + M
Sbjct: 256 ALMEMYVKCRAIDEARREFDRMQQ--RDVVAWSTMIAGYAQNGRPHESLELFERMKATSC 313
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ + T+V +LS+ + G + SH L + + LI MY+KCG + AR
Sbjct: 314 KPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARS 373
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + + ++W +M+ G A G +A+ L+ M P+ +T +++++ C +G
Sbjct: 374 VFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGL 433
Query: 361 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMI 418
++ G +F + V C ++D+ K G + +A + + E V W+T++
Sbjct: 434 VDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLL 493
Query: 419 AGC 421
+ C
Sbjct: 494 SAC 496
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 162/402 (40%), Gaps = 57/402 (14%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL------- 70
T WNS I + E + L LFR+M PN +T + CAK DL
Sbjct: 181 TSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR 240
Query: 71 --IYSQMIHGHIVKSP----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
I Q + IV + +VKC +D A + FD M RDV +W+ M+ G+AQ G
Sbjct: 241 SLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHE 300
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L LF M+ + + VT++G+ A L + S + + + I
Sbjct: 301 SLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALID 360
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC + A VF +E ++ V++WNSM+ G D++ Y+ M + +
Sbjct: 361 MYTKCGHVGRARSVFNRMEHKV--VITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNE 418
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFD 303
T V+LL++ H G D +S + +++ ++ + D
Sbjct: 419 ITFVALLTACT----------------HAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVD 462
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+C + G L EA + ME P+ V +++S C +EL
Sbjct: 463 LLC---------------KSGRLREAYKFICDMEVE---PNAVIWSTLLSACRAHADVEL 504
Query: 364 GKWFDNYACSGGL---KDNVMVCNALIDMYSKCGSIGDAREL 402
K A S L DN + L ++Y+ G GD RE+
Sbjct: 505 AK----LAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREI 542
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 84/211 (39%), Gaps = 32/211 (15%)
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+AR LFD + T +IS ++ E L F ++ G V ++ C
Sbjct: 37 AARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCA 96
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDM--------------------------- 389
A GK +A GL ++ V AL+D
Sbjct: 97 ILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNC 156
Query: 390 ----YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
YSK G + AR LF + + SW +MIA A GE+ EAL LF +++ RPN
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 446 RVTFLAVLQACTHTGFLEKG-WAISIIQYDD 475
+T + C TG LE G WA S+I D
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQD 247
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 297/597 (49%), Gaps = 20/597 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDL--IYSQMIHGHIVKSPF-----VKCDRLDCA 94
F + ++ D+E + F F+ K C ++ L I +QM+ + K F V+ + +
Sbjct: 28 FEEARRGDLERD---FLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYS 84
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQM-GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+F + S+N M+ G E L L+ M+ G++ D T + A
Sbjct: 85 SFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAK 144
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + + +SVHS +G++ DV + ++ I YAKC + A +F I ER VSWN
Sbjct: 145 LEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER--DTVSWN 202
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
SM++G + D+++ +R M GF D T+VS+L + L GRL+ I
Sbjct: 203 SMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK 262
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
L + + LISMY KCGD+DSAR +F+ + + RV+WTAMI+ Y+Q G EA +LF
Sbjct: 263 KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
F ME G PD T+ +++S CG GALELGK + +A L+ N+ V L+DMY KC
Sbjct: 323 FEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKC 382
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + +A +F A+P K +W MI A G EAL LF + + + P+ +TF+ VL
Sbjct: 383 GRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR---MSVPPSDITFIGVL 439
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H G + +G P+++HY+ + DLL R G L EA +F++ P K
Sbjct: 440 SACVHAGLVHQG--CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL-EPHSAAPYVEMANKYALGGRWDGVANI 572
D + +L AC ++ I E L ++ E +A YV +N A WD A +
Sbjct: 498 PDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKM 557
Query: 573 RTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY-HAESELTYPVLDCLALHSREEAY 628
R +M+ V K PG S I G+ F A Y E + + D L + E Y
Sbjct: 558 RALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 191/404 (47%), Gaps = 21/404 (5%)
Query: 22 WNSQIREAVNK-NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N IR N N+ L L+R+MK + ++P+ T+ F+ ACAKL ++ + +H +
Sbjct: 99 FNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSL 158
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + KC ++ A K+FDE+ RD SWN+M+ G+++ G+ ++ +
Sbjct: 159 FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAM 218
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M G + D T++ + A H L + + I + + + IS Y
Sbjct: 219 DLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMY 278
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC DL A VF + ++ R V+W +M+ + K ++ + M G D T
Sbjct: 279 GKCGDLDSARRVFNQMIKKDR--VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++LS+ AL G+ + +H ++ V L+ MY KCG ++ A +F+ +
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ +W AMI+ YA +G EAL LF M P +T + ++S C +G + G +
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCR 453
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+F + GL + +ID+ S+ G + +A E P K
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 224/400 (56%), Gaps = 2/400 (0%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R VSWN+++ GC + ++L+ R M +GF D T+ ++L F + +G +V
Sbjct: 450 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 509
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + I GFD DV V ++LI MY+ C +D + +FD D V W +M++GYAQ G +
Sbjct: 510 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSV 569
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EAL +F M AG P VT S+I G L LGK Y DN+ + ++L
Sbjct: 570 EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSL 629
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY KCG++ AR +F + +VSWT MI G AL+G EA LF ++ +++PN
Sbjct: 630 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 689
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TFLAVL AC+H G ++ GW + G + P L+H + +AD LGR G L EA +F
Sbjct: 690 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYG--FVPSLEHCAALADTLGRAGDLDEAYNF 747
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+ M IK + +W TLL AC++H N + E VA +F+LEP S +V ++N Y+ GRW
Sbjct: 748 ISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRW 807
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
+ A +R M+ +KK P S + K F A D+ H
Sbjct: 808 NEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSH 847
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 210/461 (45%), Gaps = 42/461 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNN---LTFPFIAKACAKLSDLIYSQMIHG 78
W QIR A ++ + + LF QM+ + + P + + P K+CA L + +H
Sbjct: 332 WAYQIRMAASQGQFLHAISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLHA 390
Query: 79 HIVKS------------------------PF----------VKCDRLDCAYKIFDEMAVR 104
++S PF ++ + K+FDEM R
Sbjct: 391 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 450
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
D SWN +++G A+ + L + M G D T+ + + VH
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ I G D DV V ++ I YA C + + VF + V WNSM+AG
Sbjct: 511 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSD--CDAVLWNSMLAGYAQNGS 568
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+++L +R M+ G R T SL+ +F L G+ +H++ I F+ ++ + ++
Sbjct: 569 VEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSS 628
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MY KCG++D AR +F+GI VSWTAMI GYA G EA LF ME P+
Sbjct: 629 LIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPN 688
Query: 345 LVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+T L++++ C +G ++ G K+F++ + G ++ C AL D + G + +A
Sbjct: 689 HITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFI 748
Query: 404 YALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ K S W+T++ C ++ V A ++ ++ EL+ +
Sbjct: 749 SEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPK 789
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%)
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+S R +FD + +R VSW +I G A+ EAL + M G +PD T+ +++
Sbjct: 438 ESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 497
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+ ++ G YA G ++V V ++LIDMY+ C + + ++F + + V W
Sbjct: 498 AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWN 557
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+M+AG A NG EAL +F ++++ +RP VTF +++ A + L G
Sbjct: 558 SMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 607
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 26/181 (14%)
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAA----GELPDLVTVLSMISGCGQSGALELGKWF 367
SW I A +G A+ LF M A+ +P ++ + + C G L
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVP--ASLPAALKSCAGLGLCTLAASL 388
Query: 368 DNYACSGGLKDNVMVCNALIDM----------YSKCGSIGDA----------RELFYALP 407
A G + NAL+++ + G G+ R++F +
Sbjct: 389 HALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEML 448
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
E+ VSW T+I GCA + EAL + ++ P+ T VL +++G
Sbjct: 449 ERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMV 508
Query: 468 I 468
+
Sbjct: 509 V 509
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 299/579 (51%), Gaps = 26/579 (4%)
Query: 66 KLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
K +D + + +H I+K S F C +++ A +F+++ +V +N
Sbjct: 32 KCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNT 91
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
++ Q F++M+ G+ AD T L +A L ++ +H G
Sbjct: 92 LIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYG 151
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
D+ V N+ I SY+KC L + + +E + +VSWNSM+ G +
Sbjct: 152 FFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKL 211
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYS 290
+ M D + ++L +V G + + + + +V +T++S Y
Sbjct: 212 FDEMA----ERDAVSWNTILDGYV-----KAGEMSQAFNLFEKMPERNVVSWSTMVSGYC 262
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
K GD++ AR+LFD + + V+WT +ISG+A+KG EA L+ MEAAG PD T++S
Sbjct: 263 KTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLIS 322
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
+++ C +SG L LGK +K +V V NAL+DMY+KCG + A +F + +
Sbjct: 323 ILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRD 382
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
+VSW M+ G A++G +A+ LF ++ + +P++VT +A+L ACTH GF+++G +
Sbjct: 383 LVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFN 442
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
D GI P ++HY CM DLLGR G+L+EA VQSMP++ + IWGTLL AC++H
Sbjct: 443 SMERDHGIV--PHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHN 500
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
+ + E V L LE Y ++N +A G W+ VAN+R MK V+K G S
Sbjct: 501 AVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSI 560
Query: 591 HINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
++ + FT D+ H E++ Y +L L ++ AY+
Sbjct: 561 ELDDEVHEFTVFDKSHPETDKIYQILVKLGQDLKQVAYA 599
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 219/451 (48%), Gaps = 31/451 (6%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N+I + ++ +N+ IR V +++ K F M++N + +N T+PF+ KAC
Sbjct: 78 FNQI-QDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGW 136
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAY--KIFDEMAVRDVASWNAML 113
L QMIH H+ K F KC L Y K+F EM +D+ SWN+M+
Sbjct: 137 LPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMI 196
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV- 172
G + G L +LF M + D V+ + + A +S +F + +
Sbjct: 197 GGLVKAGDLGRARKLFDEM----AERDAVSWNTILDGYVKAGEMS-----QAFNLFEKMP 247
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
+ +V +T +S Y K D++MA ++F + + +V+W +++G ++ Y
Sbjct: 248 ERNVVSWSTMVSGYCKTGDMEMARMLFDKMP--FKNLVTWTIIISGFAEKGLAKEATTLY 305
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M G + D T++S+L++ LV G+ VH+ V+V N L+ MY+KC
Sbjct: 306 NQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKC 365
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G +D A +F+ + R VSW M+ G A G ++A++LF M+ G PD VT+++++
Sbjct: 366 GRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAIL 425
Query: 353 SGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKI 410
C +G ++ G +F++ G+ ++ +ID+ + G + +A L ++P E
Sbjct: 426 CACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPN 485
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V W T++ C ++ A + +L+ L+
Sbjct: 486 DVIWGTLLGACRVHNAVPLAEKVLDRLITLE 516
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 297/589 (50%), Gaps = 37/589 (6%)
Query: 73 SQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+Q IH HIVK+ + KC ++ A K+FDE+ R+V SW ++ G+
Sbjct: 88 AQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVH 147
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA--IHAKHLSLLKSVHSFGIHIGVDADV 176
E +++F M G T+ A+ +H+K L K +H + I ++ D
Sbjct: 148 DSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELG--KQIHGYSIKYRIEFDA 205
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
S+ N+ S Y+KC L+ A F I R + V+SW ++++ + L F+ M+
Sbjct: 206 SIGNSLCSLYSKCGSLECAVKAFRRI--RDKNVISWTTVISAWGDNGEAATGLQFFVEML 263
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+ T+ S LS ++L G +HS I GF+ ++ + N+++ +Y KCG I
Sbjct: 264 SECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIH 323
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQ-----KGDL------DEALRLFFAMEAAGELPDL 345
A+ LFD + + V+W AMI+G+A+ K DL EAL +F + +G PDL
Sbjct: 324 EAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDL 383
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T S++S C ALE G+ G +V+V AL++MY+KCGSI A + F
Sbjct: 384 FTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVE 443
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + ++SWT+MI G A NG+ +AL LF + +RPN++TF+ VL AC+H G +++
Sbjct: 444 MSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDE- 502
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
A+ Q P +DHY+C+ D+ R G+L EA DF++ M ++ + IW L+
Sbjct: 503 -ALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAG 561
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C+ +E+G Y A L L+P Y + N Y G+W V+ +R MMK ++ +
Sbjct: 562 CRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLK 621
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
S I K +F R HA+S Y +L L E+A S +W
Sbjct: 622 DWSWISIKDKIYSFKRNARSHAQSGEMYELLGNL----HEKAKSFGYEW 666
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 216/480 (45%), Gaps = 68/480 (14%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
PR N + W + + V+ ++ + +FR+M + P N T A + L
Sbjct: 131 PRRNVV-------SWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDL 183
Query: 68 SDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
+ IHG+ +K S + KC L+CA K F + ++V SW ++
Sbjct: 184 HSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVI 243
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
+ G L+ F M ++ + T+ + L + +HS I +G +
Sbjct: 244 SAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFE 303
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF--DD---- 227
+++ + N+ + Y KC + A+ +F +E ++V+WN+M+AG F DD
Sbjct: 304 SNLPIKNSIMYLYLKCGWIHEAKKLFDEMET--ISLVTWNAMIAGHARMMDFAKDDLAAH 361
Query: 228 -----SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+L+ + + +G + D+ T S+LS AL QG VH+ I GF DV V
Sbjct: 362 QCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVG 421
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
L++MY+KCG I+ A F + RT +SWT+MI+GYAQ G +AL LF M AG
Sbjct: 422 TALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVR 481
Query: 343 PDLVTVLSMISGCGQSGALE--------------LGKWFDNYACSGGLKDNVMVCNALID 388
P+ +T + ++S C +G ++ + D+YAC LID
Sbjct: 482 PNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYAC-------------LID 528
Query: 389 MYSKCGSIGDARELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
M+ + G + +A + + P + + W+ +IAGC G+ QL L+L+P
Sbjct: 529 MFVRLGRLDEAFDFIKEMDLEPNEFI--WSILIAGCRSQGKLELGFYAAEQL--LNLKPK 584
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 168/341 (49%), Gaps = 13/341 (3%)
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G + + + + Q I K +S + +H+ + G D + ++ YAKC ++ A
Sbjct: 64 GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETA 123
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
VF + R VVSW +++ G + K + ++ +R M+ G T+ + LS+
Sbjct: 124 RKVFDELPR--RNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASS 181
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
+ G+ +H + I Y + D S+ N+L S+YSKCG ++ A F I D+ +SWT
Sbjct: 182 DLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTT 241
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+IS + G+ L+ F M + P+ T+ S +S C +L++G + G
Sbjct: 242 VISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLG 301
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF-------- 427
+ N+ + N+++ +Y KCG I +A++LF + +V+W MIAG A +F
Sbjct: 302 FESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAH 361
Query: 428 ---VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
EAL +F +L ++P+ TF +VL C+ LE+G
Sbjct: 362 QCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQG 402
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 4/244 (1%)
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
F ++L+F R G +++ V +L + + + + +H+H + G D ++
Sbjct: 54 FREALSFIRE----GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTF 109
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+++Y+KCG +++AR +FD + R VSWT +++GY + A+++F M AG P
Sbjct: 110 LVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPT 169
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ + +S + ELGK Y+ ++ + + N+L +YSKCGS+ A + F
Sbjct: 170 NYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFR 229
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ +K V+SWTT+I+ NGE L F +++ + PN T + L C L+
Sbjct: 230 RIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDI 289
Query: 465 GWAI 468
G I
Sbjct: 290 GTQI 293
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 310/639 (48%), Gaps = 30/639 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ TI+ WN+ I ++ K L+F M+ + + P+ T + CA
Sbjct: 203 FDRMEEHDTIS-WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDH 261
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH ++S + +L A +F M+ RD+ SWN M+
Sbjct: 262 FSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISS 321
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ Q + L+ + + +T A L K VH+ + + + +
Sbjct: 322 YVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN 381
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V N+ I+ Y KC+ ++ AE VF + +VS+N ++ G + ++ + M
Sbjct: 382 LLVGNSLITMYGKCNSMEDAEKVFQSMPTH--DIVSYNVLIGGYAVLEDGTKAMQVFSWM 439
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
G + + T++++ SF L GR +H++ I GF D V N+LI+MY+KCG+
Sbjct: 440 RSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGN 499
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
++S+ +F+ I ++ VSW A+I+ Q G +EAL+LF M+ AG D V + +S
Sbjct: 500 LESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSS 559
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS- 413
C +LE G GL + V NA +DMY KCG + E+ +P++ +
Sbjct: 560 CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD---EMLQVVPDQAIRPQ 616
Query: 414 --WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
W T+I+G A G F EA + F Q++ +P+ VTF+A+L AC+H G ++KG I
Sbjct: 617 QCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG----ID 672
Query: 472 QYDDKGISY--NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
Y+ S+ +P + H C+ DLLGR G+ EA F++ MP+ + IW +LL + + H
Sbjct: 673 YYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTH 732
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+EIG A L +L+P + YV ++N YA RW V +R+ MK + K P S
Sbjct: 733 KNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSW 792
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ + TF DR H +E Y LD + L RE Y
Sbjct: 793 LKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGY 831
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 227/504 (45%), Gaps = 25/504 (4%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+ L +RQM+++ + N F + C L + + + ++ S
Sbjct: 128 EALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLI 187
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
F R+ A K+FD M D SWNAM+ ++ G +F +MR G++ D
Sbjct: 188 TMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDAT 247
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ L + H S +HS + +D+ V+V N ++ Y+ L AE +F +
Sbjct: 248 TLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 307
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R ++SWN+M++ D+L + + + T S L + P AL+
Sbjct: 308 SR--RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 365
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G++VH+ + ++ V N+LI+MY KC ++ A +F + VS+ +I GYA
Sbjct: 366 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 425
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVM 381
D +A+++F M +AG P+ +T++++ S L G+ Y G +
Sbjct: 426 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 485
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N+LI MY+KCG++ + +F ++ K +VSW +IA G EAL LF +
Sbjct: 486 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAG 545
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGK 499
+ +RV L +C LE+G +Q G+ + D Y A D+ G+ GK
Sbjct: 546 NKLDRVCLAECLSSCASLASLEEG-----MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 600
Query: 500 LKEALDFVQSMPIKSDAGIWGTLL 523
+ E L V I+ W TL+
Sbjct: 601 MDEMLQVVPDQAIRPQQ-CWNTLI 623
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 182/362 (50%), Gaps = 8/362 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVTVMGLTQA 150
A ++F EM R+V SW A++V + G+LE LR + MR G+ + F TV+ L
Sbjct: 98 AQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLC-G 156
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
++ + L V S I G+ VSV N+ I+ + + AE +F +EE +
Sbjct: 157 SLENEVPGL--QVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEH--DTI 212
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SWN+M++ ++ + M ++G R D TT+ SL+S + G +HS
Sbjct: 213 SWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLC 272
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ D V+VIN L++MYS G + A LF + R +SW MIS Y Q + +AL
Sbjct: 273 LRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDAL 332
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
+ + E P+ +T S + C GAL GK L+ N++V N+LI MY
Sbjct: 333 KTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMY 392
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KC S+ DA ++F ++P +VS+ +I G A+ + +A+ +F + ++PN +T +
Sbjct: 393 GKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMI 452
Query: 451 AV 452
+
Sbjct: 453 NI 454
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 184/417 (44%), Gaps = 14/417 (3%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA---KHL 157
MA R ++W + G + G + MR G+ + L A + +
Sbjct: 1 MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ ++H+ G+ +V + + Y + A+ +F + ER VVSW +++
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPER--NVVSWTALMV 118
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVT---TVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+ +++L YR M +G + TVVSL S E V G V S I G
Sbjct: 119 ALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSL---ENEVPGLQVASQVIVSG 175
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
VSV N+LI+M+ G + A LFD + + +SW AMIS Y+ +G + +F
Sbjct: 176 LQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFS 235
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M G PD T+ S++S C S G + L +V V NAL++MYS G
Sbjct: 236 DMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 295
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ DA LF+ + + ++SW TMI+ N +AL QL + PN +TF + L
Sbjct: 296 KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALG 355
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
AC+ G L G + I +S L + + + G+ +++A QSMP
Sbjct: 356 ACSSPGALIDGKMVHAIVLQ---LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 409
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 261/487 (53%), Gaps = 42/487 (8%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWIS---SYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
LK +H+ + G+ D ++S S D L A++VF G + R T + WN M+
Sbjct: 59 LKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFD-RPDTFL-WNLMI 116
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G + D+ + SL Y+ M+ + T SLL + AL + +H+ G++
Sbjct: 117 RGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYE 176
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGI------------------------------- 305
DV +N+LI+ Y+ G+ A +LFD I
Sbjct: 177 NDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKM 236
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ +SWT MISGY Q G EAL+LF M+ + PD V++ + +S C Q GALE GK
Sbjct: 237 VEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 296
Query: 366 WFDNYACSGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
W +Y ++ D+V+ C LIDMY+KCG +G+A E+F + K V +WT +I+G A +
Sbjct: 297 WIHSYLTKTRIRMDSVLGC-VLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYH 355
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD-DKGISYNPE 483
G EA+ F ++ ++ ++PN +TF VL AC++TG +E+G +I Y+ ++ + P
Sbjct: 356 GHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEG---KLIFYNMERDYNLKPT 412
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HY C+ DLL R G L EA F+Q MP+K +A IWG LL AC+IH NIE+GE + L
Sbjct: 413 IEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 472
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
++P+ YV AN +A+G +WD A R +MK V K PG S + G T F A D
Sbjct: 473 AIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 532
Query: 604 RYHAESE 610
R H E E
Sbjct: 533 RSHPEIE 539
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 191/435 (43%), Gaps = 58/435 (13%)
Query: 57 FPFIAKACAKLSDL--IYSQMIHGHIVK-----SPFVKC-------DRLDCAYKIFDEMA 102
P C+K +L I+++M+ +++ + F+ C D L A +FD
Sbjct: 46 MPNTETRCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFD 105
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
D WN M+ GF+ E L L+ M + T L +A + L
Sbjct: 106 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQ 165
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ +G + DV N+ I+SYA + K+A L+F I + VSWNS++ G
Sbjct: 166 IHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKP--DAVSWNSVIKGYAKA 223
Query: 223 DKFDDSLNFYRHM----------MYNGF---------------------RLDVTTVVSLL 251
K D +L +R M M +G+ D ++ + L
Sbjct: 224 GKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANAL 283
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
S+ AL QG+ +HS+ +D + LI MY+KCGD+ A +F I ++
Sbjct: 284 SACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQ 343
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNY 370
+WTA+ISGYA G EA+ F M+ G P+++T ++++ C +G +E GK F N
Sbjct: 344 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNM 403
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALN----- 424
LK + ++D+ S+ G + +A+ +P K V W ++ C ++
Sbjct: 404 ERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 463
Query: 425 ----GEFVEALDLFH 435
GE + A+D +H
Sbjct: 464 GEEIGEILIAIDPYH 478
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 135/324 (41%), Gaps = 48/324 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR +E ++LLL+++M N TFP + KAC+ LS L + IH I
Sbjct: 112 WNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQIT 171
Query: 82 K---------------------------------------------SPFVKCDRLDCAYK 96
K + K ++D A
Sbjct: 172 KLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALT 231
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F +M ++ SW M+ G+ Q G + L+LF+ M+ ++ D V++ A
Sbjct: 232 LFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 291
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +HS+ + D + I YAKC D+ A VF I+ ++V +W +++
Sbjct: 292 LEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQR--KSVQAWTALI 349
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV-HSHGIHYGF 275
+G Y ++++ + M G + +V T ++L++ + +G+L+ ++ Y
Sbjct: 350 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNL 409
Query: 276 DLDVSVINTLISMYSKCGDIDSAR 299
+ ++ + S+ G +D A+
Sbjct: 410 KPTIEHYGCVVDLLSRAGLLDEAK 433
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 182/574 (31%), Positives = 289/574 (50%), Gaps = 41/574 (7%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A+ IF+ + + WN M+ G+ F M + ++ D + + +A
Sbjct: 207 LHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKA 266
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ + +SV+ +G D ++ V N I YA+ LK A VF E + VV
Sbjct: 267 CQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVF--DESSDKDVV 324
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+W +M+ G D ++++ + M+ + + T+++++S+ L G+ VH
Sbjct: 325 TWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV 384
Query: 271 IHYGFDLDVSVINTLISMY-------------------------------SKCGDIDSAR 299
+S+ N L+ MY +KCGD++SAR
Sbjct: 385 EEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESAR 444
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
FD + V W+AMI+GY+Q E+L+LF M G +P T++S++S CGQ
Sbjct: 445 RFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLT 504
Query: 360 ALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
L LG W Y G + +V + NA++DMY+KCGSI A E+F +PE+ ++SW TMI
Sbjct: 505 CLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMI 564
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
AG A NG +A+++F Q+ + PN +TF+++L AC+H G + +G +D+
Sbjct: 565 AGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREY----FDNMER 620
Query: 479 SY--NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
Y PE HY+CM DLLGR G L+EA + +MP++ WG LL AC++H N+E+
Sbjct: 621 KYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELAR 680
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A+ L +L+P + YV +AN A +W V +R++MK VKK PG SL I+G
Sbjct: 681 LSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGF 740
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
F D H +SE Y L+C L S++ + S
Sbjct: 741 VEFLVADESHPQSEEIYK-LECDNLSSKKLTWVS 773
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 217/481 (45%), Gaps = 53/481 (11%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
NR+ + +T WN+ IR N + F M Q +E ++ +F F KAC +
Sbjct: 214 FNRVEQPNTF-MWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFET 272
Query: 70 LIYSQMIHGHIVKSPFVKCDRL---------------DCAYKIFDEMAVRDVASWNAMLV 114
+ + ++ + K F C+ L A ++FDE + +DV +W M+
Sbjct: 273 VFEGESVYCVVWKMGF-DCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMID 331
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH---------- 164
G+A E + +F M L ++ + VT++ + A +L + K VH
Sbjct: 332 GYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRC 391
Query: 165 SFGIHIG-----------VDA----------DVSVCNTWISSYAKCDDLKMAELVFCGIE 203
S +H VDA DV + ++ YAKC DL+ A F +
Sbjct: 392 SLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFF--DQ 449
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+ V W++M+AG + +K +SL + MM G T+VS+LS+ L G
Sbjct: 450 TPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLG 509
Query: 264 RLVHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
+H + + L V++ N ++ MY+KCG ID+A +F + +R +SW MI+GYA
Sbjct: 510 DWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAA 569
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVM 381
G +A+ +F M G P+ +T +S+++ C G + G+ +FDN G+K
Sbjct: 570 NGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERG 629
Query: 382 VCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
++D+ + G + +A +L +P + +W ++ C ++G A H L+ L
Sbjct: 630 HYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRL 689
Query: 441 D 441
D
Sbjct: 690 D 690
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 170/369 (46%), Gaps = 38/369 (10%)
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A DL A +F +E+ WN+M+ G K + +F+ +M +D +
Sbjct: 202 AHSGDLHYAHTIFNRVEQP--NTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRS 259
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V L + E + +G V+ GFD ++ V N LI Y++ G + +AR +FD
Sbjct: 260 FVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESS 319
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
D+ V+WT MI GYA +EA+ +F M + P+ VT+++++S C G LE+GK
Sbjct: 320 DKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKR 379
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-----------------YA---- 405
++ ++ + NAL+DMY KC + DARELF YA
Sbjct: 380 VHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGD 439
Query: 406 ----------LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
P K V W+ MIAG + N + E+L LFH++ME + P T ++VL A
Sbjct: 440 LESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSA 499
Query: 456 CTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
C L G W I QY G + + + D+ + G + A + +MP ++
Sbjct: 500 CGQLTCLNLGDW---IHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERN 556
Query: 515 DAGIWGTLL 523
W T++
Sbjct: 557 LIS-WNTMI 564
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 297/597 (49%), Gaps = 20/597 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDL--IYSQMIHGHIVKSPF-----VKCDRLDCA 94
F + ++ D+E + F F+ K C ++ L I +QM+ + K F V+ + +
Sbjct: 24 FEEARRGDLERD---FLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYS 80
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQM-GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+F + S+N M+ G E L L+ M+ G++ D T + A
Sbjct: 81 SFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAK 140
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + + +SVHS +G++ DV + ++ I YAKC + A +F I ER VSWN
Sbjct: 141 LEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER--DTVSWN 198
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
SM++G + D+++ +R M GF D T+VS+L + L GRL+ I
Sbjct: 199 SMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK 258
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
L + + LISMY KCGD+DSAR +F+ + + RV+WTAMI+ Y+Q G EA +LF
Sbjct: 259 KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 318
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
F ME G PD T+ +++S CG GALELGK + +A L+ N+ V L+DMY KC
Sbjct: 319 FEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKC 378
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + +A +F A+P K +W MI A G EAL LF + + + P+ +TF+ VL
Sbjct: 379 GRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR---MSVPPSDITFIGVL 435
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H G + +G P+++HY+ + DLL R G L EA +F++ P K
Sbjct: 436 SACVHAGLVHQG--CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 493
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL-EPHSAAPYVEMANKYALGGRWDGVANI 572
D + +L AC ++ I E L ++ E +A YV +N A WD A +
Sbjct: 494 PDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKM 553
Query: 573 RTMMKRNQVKKFPGQSLFHINGKTCTFTA-EDRYHAESELTYPVLDCLALHSREEAY 628
R +M+ V K PG S I G+ F A D E + + D L + E Y
Sbjct: 554 RALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 610
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 191/404 (47%), Gaps = 21/404 (5%)
Query: 22 WNSQIREAVNK-NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N IR N N+ L L+R+MK + ++P+ T+ F+ ACAKL ++ + +H +
Sbjct: 95 FNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSL 154
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + KC ++ A K+FDE+ RD SWN+M+ G+++ G+ ++ +
Sbjct: 155 FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAM 214
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M G + D T++ + A H L + + I + + + IS Y
Sbjct: 215 DLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMY 274
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC DL A VF + ++ R V+W +M+ + K ++ + M G D T
Sbjct: 275 GKCGDLDSARRVFNQMIKKDR--VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 332
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++LS+ AL G+ + +H ++ V L+ MY KCG ++ A +F+ +
Sbjct: 333 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 392
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ +W AMI+ YA +G EAL LF M P +T + ++S C +G + G +
Sbjct: 393 VKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCR 449
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+F + GL + +ID+ S+ G + +A E P K
Sbjct: 450 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 493
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 285/551 (51%), Gaps = 12/551 (2%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ S + K + A K+FD + RD SWN +L G + L L F MR ++ D
Sbjct: 87 ILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPD 146
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T + I L + VH+ + + D D + + YA+ ++ A VF
Sbjct: 147 NFTYAII----IPCCDLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFD 202
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
G+ R +V+WN+M++ + + D S+ +R + G D T +L+ F +
Sbjct: 203 GMPSR--GLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQV 260
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+ VHS I GF D N L+++YSKCG + SA LF+ I D+ VSWT +I G+
Sbjct: 261 FEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGF 320
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL-KDN 379
Q G ++EA+ LF+ M+ P+ T ++ C + A + G+ F GL +
Sbjct: 321 LQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGAD 380
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V+V +A++DMYSKCG +GDA F +PE+ + SW +I G A NG ++AL L+++++
Sbjct: 381 VVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVL 440
Query: 440 LD---LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
L + PN VTF+ VL AC+H G L++G++ D I P +HY+CM DLLGR
Sbjct: 441 LGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLI--KPTAEHYTCMVDLLGR 498
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G L+EA + ++PIK D +WG LL ACK+H ++++ A L+ EP +++ YV +
Sbjct: 499 AGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLL 558
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
AN Y G W IR +M+ V+K G S I +F A D H + E+ VL
Sbjct: 559 ANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQIEVASQVL 618
Query: 617 DCLALHSREEA 627
L L RE +
Sbjct: 619 PRLYLQMRERS 629
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 195/430 (45%), Gaps = 32/430 (7%)
Query: 20 NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
+ WN + V ++ + L F +M+ + + P+N T+ I C DL + Q +H
Sbjct: 113 HSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVHAD 168
Query: 80 IVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
IVK + + + A K+FD M R + +WNAM+ +++ G +
Sbjct: 169 IVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKS 228
Query: 126 LRLFYNMRLVGIQAD-FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ LF + GI AD + + L + A + ++ VHS I G +D N ++
Sbjct: 229 IGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQ-VHSLIIERGFCSDRFTNNALVN 287
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+KC + A +F I + + VVSW ++ G ++++ + M +
Sbjct: 288 LYSKCGYVASASRLFEEIPD--QDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNS 345
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL---DVSVINTLISMYSKCGDIDSARVL 301
T LL + A +GR H HG+ F L DV V + ++ MYSKCG++ A
Sbjct: 346 FTFGGLLGACADANAFQKGR--HFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRA 403
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM---EAAGELPDLVTVLSMISGCGQS 358
F + +R SW +I GYAQ G +AL+L+ M +G P+ VT + ++ C +
Sbjct: 404 FQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHN 463
Query: 359 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTT 416
G L+ G +F +K ++D+ + G + +A L ALP K V W
Sbjct: 464 GLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGA 523
Query: 417 MIAGCALNGE 426
++ C L+G+
Sbjct: 524 LLGACKLHGD 533
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 28/247 (11%)
Query: 224 KFDDSLNFYRH------------MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
K+ S+ Y H ++ NG V LL +++ +AL + +
Sbjct: 18 KYIRSIELYSHGHMYKAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKL----L 73
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
H+ V NT++S Y K G + A LFDG R SW ++SG + L E L
Sbjct: 74 HFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLT 133
Query: 332 LFFAMEAAGELPDLVTVLSMISGC----GQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
F M + PD T +I C GQ ++ K CS + + L+
Sbjct: 134 HFMKMRCSSVRPDNFTYAIIIPCCDLGFGQQVHADIVK-----VCS---DLDAFIGTNLL 185
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
MY++ G IGDAR++F +P + +V+W MI+ + G +++ LF QL + +
Sbjct: 186 RMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEY 245
Query: 448 TFLAVLQ 454
T+ VL
Sbjct: 246 TYAIVLN 252
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ +V+ N ++ Y K G + +A +LF ++ SW +++GC N + E L F +
Sbjct: 78 QPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMK 137
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ +RP+ T+ A++ C GF ++
Sbjct: 138 MRCSSVRPDNFTY-AIIIPCCDLGFGQQ 164
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 292/590 (49%), Gaps = 29/590 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ----NDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
W + I V E+ + L +M + + PN+ T +AC L +L + +H
Sbjct: 184 WTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLH 243
Query: 78 GHIVK-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G++VK SP V KC + A +F E+ +DV SW +++ + + G +
Sbjct: 244 GYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLIT 303
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M G+Q D + V + + ++ K+ H+ V + N I
Sbjct: 304 EAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALI 363
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG---F 240
S Y K + + A VF + +R SWN MV G L YR M F
Sbjct: 364 SMYGKFEMVDSAGRVFRLLHQR--DADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEF 421
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
++VS +SS L GR H + I + D D SV N LI MY +CG D A
Sbjct: 422 WCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACK 481
Query: 301 LFD-GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F V+W +IS YA G + A+ L+ M G P+ T++++IS C
Sbjct: 482 IFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLV 541
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
ALE G+ +Y G +V + ALIDMY+KCG +G AR +F ++ + VV+W MI+
Sbjct: 542 ALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMIS 601
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG-I 478
G ++GE +AL+LF ++ ++PN VTFLA+L A H+G LE+G + + G
Sbjct: 602 GYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKV----FTRMGKY 657
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
S P L HY+CM DLLG+ G L+EA D V +MPI+ D GIWGTLL ACK+H N E+G +
Sbjct: 658 SLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRI 717
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
A F +P + Y+ ++N Y +WD + +R MK V+K G S
Sbjct: 718 AKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGVQKGVGWS 767
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 240/537 (44%), Gaps = 38/537 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS IR ++ L R+M + P+ T P A A A+L L +H + V
Sbjct: 79 WNSLIRTHHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCV 138
Query: 82 KSP------------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + +C + A K+F+EM RDV +W A++ G + G
Sbjct: 139 RYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESG 198
Query: 124 NVLRLFYNM-RLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
LR M RL G ++ + T+ +A L+ + +H + + +G+ V
Sbjct: 199 EGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVI 258
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ S Y+KC + A +F + E + VVSW S++ +++ ++ MM +G
Sbjct: 259 SALFSMYSKCYSTEDACALFLELPE--KDVVSWTSLIGIYCRRGLITEAMELFQQMMESG 316
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ D V +LS + G+ H+ F V + N LISMY K +DSA
Sbjct: 317 LQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAG 376
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-----LPDLVTVLSMISG 354
+F + R SW M+ GY + G + L L+ M+ + + D +++S IS
Sbjct: 377 RVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVAD--SLVSAISS 434
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKIVVS 413
C + L LG+ Y+ L ++ V N LI MY +CG A ++F A + VV+
Sbjct: 435 CSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVT 494
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQ 472
W T+I+ A G A+ L+ Q++ L PN T + V+ AC + LE+G I S ++
Sbjct: 495 WNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVK 554
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ G Y+ ++ + + D+ + G+L A SM ++ D W ++ +H
Sbjct: 555 --EMGWDYDVSIN--TALIDMYAKCGQLGIARRIFDSM-LQHDVVAWNVMISGYGMH 606
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 8/199 (4%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
VH+ + G + L+S YS G A + F W ++I + D
Sbjct: 32 VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL----KDNVM 381
AL M A+G P T S + GAL +G Y GL D+V
Sbjct: 92 FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVA 151
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL- 440
V ++L+ MY++CG++ DA ++F +PE+ VV+WT +I+GC NGE E L +++ L
Sbjct: 152 VASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA 211
Query: 441 ---DLRPNRVTFLAVLQAC 456
+RPN T + L+AC
Sbjct: 212 GDGSVRPNSRTMESGLEAC 230
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 16/177 (9%)
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
A + GL + L+ YS G G A F A P W ++I +FV A
Sbjct: 36 AVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASDFVAA 95
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-------SIIQYDDKGISYNPE 483
L +++ RP+ T A G L G A+ ++ D ++
Sbjct: 96 LSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASS 155
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
L + + R G +++A+ + MP + D W ++ C N E GE + Y
Sbjct: 156 LVY------MYARCGNVRDAVKVFEEMP-ERDVVAWTAVISGCV--RNGESGEGLRY 203
>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 748
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/600 (30%), Positives = 310/600 (51%), Gaps = 27/600 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------V 86
L ++M+ I+P+ +TF + ++++ L Q +H + F
Sbjct: 134 LVKEMRFQGIKPSPVTFLEMLSGISEITQL---QCLHAFALVYGFECDIAVMNSMLNLYC 190
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KCDR+ A ++FD+M RD+ SWN M+ GFA + + +L+L Y MR G++ D T
Sbjct: 191 KCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGA 250
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ L + + +H + G D D+ + I+ Y KC + + + V I ++
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDK- 309
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
VV W M++G + + +L + M+++G L + S+++S + G V
Sbjct: 310 -DVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + + G+ LD +N+ I+MY+KCG +D + +LF+ + +R VSW A+ISG+AQ GDL
Sbjct: 369 HGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDL 428
Query: 327 DEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+AL LF M+ + D +TV+S++ C +GAL +G+ ++ +V A
Sbjct: 429 CKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTA 488
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMYSKCG + A+ F ++ K VVSW T+IAG +G+ AL+++ + + ++PN
Sbjct: 489 LVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPN 548
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
V FLAVL +C+H G +++G I D G+ P +H +C+ DLL R ++++A
Sbjct: 549 HVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV--EPNHEHLACVVDLLCRAKRVEDAFK 606
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F + + + G +L A + E+ + + + +L+P A YV + + +A R
Sbjct: 607 FYKENFTRPSIDVLGIILDASHANGKTEVEDIICRDMIELKPVDAGHYVRLGHSFAAMKR 666
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
WD V+ M+ +KK PG S INGKT TF H++ ++ L L SRE
Sbjct: 667 WDDVSESWNQMRSLGLKKLPGWSKIEINGKTTTFFMNHTSHSDETVSL-----LKLLSRE 721
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 266/556 (47%), Gaps = 29/556 (5%)
Query: 13 IYRSSTINQ---WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
I RSS +N +NS I + + + L F M N + P+ TFP + KAC L
Sbjct: 2 IRRSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQL 61
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + IH ++ + F K L A K+FDEM RDV W AM+
Sbjct: 62 LSFGLSIHQKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGC 121
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+++ G L MR GI+ VT + + ++ L+ +H+F + G + D
Sbjct: 122 YSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLSGI---SEITQLQCLHAFALVYGFECD 178
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
++V N+ ++ Y KCD + A+ +F +E+R +VSWN+M++G + + L M
Sbjct: 179 IAVMNSMLNLYCKCDRVGDAKELFDQMEQR--DMVSWNTMISGFAFVANMSEILKLLYRM 236
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+G R D T + LS L GR++H + GFD D+ + LI+MY KCG+
Sbjct: 237 RDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEE 296
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+++ + + I D+ V WT MISG + G ++AL +F M +G + S+++ C
Sbjct: 297 EASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASC 356
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
Q G+ +LG Y G + N+ I MY+KCG + + LF + E+ +VSW
Sbjct: 357 AQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWN 416
Query: 416 TMIAGCALNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+I+G A +G+ +AL LF ++ + + + +T +++LQAC+ G L G I I
Sbjct: 417 AIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIR 476
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH--LNI 532
P + + D+ + G L+ A S+ K D WGTL+ H +I
Sbjct: 477 S---FIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWK-DVVSWGTLIAGYGFHGKGDI 532
Query: 533 EIGEYVAYCLFKLEPH 548
+ Y + F ++P+
Sbjct: 533 ALEIYSEFLHFGMKPN 548
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/619 (29%), Positives = 307/619 (49%), Gaps = 25/619 (4%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACA-KLSDLIYSQMIHGHIVKSP-----FVKCD-- 89
L LFR+M N+I P+ TFP + A A L ++ +H +K+ FV
Sbjct: 95 VLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLV 154
Query: 90 ----RLDCAY---KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
++ C + K+FD M R++ SW M+ G+A + L +F MRLV +
Sbjct: 155 NFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEF 214
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ A + + + K VH + GV VSV N ++ YAKC +L + ++F
Sbjct: 215 VFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMC 274
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
++ ++W++++ G + +L + M Y GF T+V +L + A+ +
Sbjct: 275 SDK--NAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEE 332
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ H + + G++ + L+ MY+K G AR FD + + V WT++I+GY Q
Sbjct: 333 GKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQ 392
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +EAL ++ M+ LP+ +T+ S++ C ALE GK GL + +
Sbjct: 393 NGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSI 452
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+AL MY+KCGS+ + +F + ++ +VSW MI+G + NG EAL+LF ++
Sbjct: 453 RSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGT 512
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+P+ +TF+ VL AC+H G +++GWA + +D+ P ++HY+CM D+L R GKL E
Sbjct: 513 KPDHITFVTVLSACSHMGIVKRGWAYFNMMFDE--FCLVPRVEHYACMVDVLSRAGKLNE 570
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A +F++S I +W LL AC+ H N E+G Y L +L ++ YV +++ Y
Sbjct: 571 AKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTA 630
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
GR V +R MMK V+K G S + F D+ H + E + L H
Sbjct: 631 MGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKH 690
Query: 623 SREEAYSSHLKWIPEHEAG 641
+++ Y P HE+
Sbjct: 691 MKDDGYR------PGHESA 703
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/492 (30%), Positives = 248/492 (50%), Gaps = 28/492 (5%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV---------------KCDRLDCAYK 96
P N +F + A L Q++H HI+K P++ KC L A
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLEN--VLRLFYNMRLVGIQADFVTVMGL-TQAAIH 153
+F+ + ++V S+N ++ G + G + VL LF M I D T G+ T AA++
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ VH GI DV V ++ ++ Y K + A +F + ER +VSW
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPER--NLVSWT 182
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+M++G ++L + M L+ S+LS+ VCPE + G+ VH +
Sbjct: 183 TMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKN 242
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G VSV+N L++MY+KCG+++ + +LF+ D+ ++W+A+I+GY+Q GD +AL+LF
Sbjct: 243 GVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLF 302
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M AG +P T++ ++ C A+E GK Y G + + AL+DMY+K
Sbjct: 303 SKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKF 362
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G GDAR+ F L E +V WT++IAG NG+ EAL ++ ++ + PN +T +VL
Sbjct: 363 GFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVL 422
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISY--NPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
+AC++ LE+G Q + I Y PEL S ++ + + G L+E + + M
Sbjct: 423 KACSNLAALEQGK-----QIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRM- 476
Query: 512 IKSDAGIWGTLL 523
++ D W ++
Sbjct: 477 LQRDIVSWNAMI 488
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 117/246 (47%), Gaps = 16/246 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I ++HK L LF +M P+ T + KAC+ ++ + + HG+++
Sbjct: 282 WSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLL 341
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + K A K FD + D+ W +++ G+ Q G E L
Sbjct: 342 KSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALS 401
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
++ M++ I + +T+ + +A + L K +H+ I G+ ++S+ + + YA
Sbjct: 402 MYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYA 461
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L+ L+F + + R +VSWN+M++G + ++L + M G + D T
Sbjct: 462 KCGSLEEGVLIFRRMLQ--RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITF 519
Query: 248 VSLLSS 253
V++LS+
Sbjct: 520 VTVLSA 525
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I V + + L ++ +M+ I PN LT + KAC+ L+ L + IH +
Sbjct: 383 WTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTI 442
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + KC L+ IF M RD+ SWNAM+ G +Q G L
Sbjct: 443 KYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALE 502
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIH 153
LF MRL G + D +T + + A H
Sbjct: 503 LFEEMRLEGTKPDHITFVTVLSACSH 528
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 300/571 (52%), Gaps = 29/571 (5%)
Query: 66 KLSDLIYSQMIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNA 111
K ++L + +H I+KS F C ++ A F+++ +V +N
Sbjct: 29 KCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNT 88
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
M+ + F+ M+ G AD T L + L +++SVH+ G
Sbjct: 89 MIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFG 148
Query: 172 VDADVSVCNTWISSYAKCDD--LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
+DV V N+ I SY+KC + A+ +F + R R VVSWNSM++G G ++++
Sbjct: 149 FMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGAR-RDVVSWNSMISGLAKGGLYEEAR 207
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISM 288
+ M D + ++L +V G++ + + + +V +T++
Sbjct: 208 KVFDEMPEK----DGISWNTMLDGYV-----KVGKMDDAFKLFDEMPERNVVSWSTMVLG 258
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y K GD++ AR+LFD + + VSWT ++SG+A+KG EA+ LF ME A D TV
Sbjct: 259 YCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTV 318
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
+S+++ C +SG L LG+ + K + NAL+DMY+KCG + A ++F +
Sbjct: 319 MSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKN 378
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
K VVSW M+ G A++G V+AL+LF ++ E PN+VT + VL ACTH G ++ G I
Sbjct: 379 KDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDG--I 436
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
++ + PE++HY CM DLLGRKG+L+EA+ +++MP+ +A IWGTLL AC++
Sbjct: 437 RYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRM 496
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
H +E+ V L +LEP + + ++N YA G W+ VAN R M+ KK G S
Sbjct: 497 HNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGAS 556
Query: 589 LFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+N + FT DR H +S+ Y V++ L
Sbjct: 557 SIEVNNEVHEFTVFDRSHPKSDNIYQVINGL 587
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 208/444 (46%), Gaps = 31/444 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ +N+ IR + ++ + F M+++ +N TFPF+ K C L + +H
Sbjct: 82 NVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVH 141
Query: 78 GHIVKSPFV--------------KCDR--LDCAYKIFDEM-AVRDVASWNAMLVGFAQMG 120
I K F+ KC + A K+F M A RDV SWN+M+ G A+ G
Sbjct: 142 AQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGG 201
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV-DADVSVC 179
E ++F M + D G++ + ++ + K +F + + + +V
Sbjct: 202 LYEEARKVFDEMP----EKD-----GISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSW 252
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+T + Y K D++MA ++F + ++ +VSW +V+G ++++ + M
Sbjct: 253 STMVLGYCKAGDMEMARMLFDKMP--VKNLVSWTIIVSGFAEKGLAREAISLFDQMEKAC 310
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+LD TV+S+L++ L G +H+ + F + N L+ MY+KCG ++ A
Sbjct: 311 LKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAY 370
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F+ I ++ VSW AM+ G A G +AL LF M+ G P+ VT++ ++ C +G
Sbjct: 371 DVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAG 430
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
++ G ++F L V ++D+ + G + +A L +P + W T+
Sbjct: 431 LIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTL 490
Query: 418 IAGCALNGEFVEALDLFHQLMELD 441
+ C ++ A ++ L+EL+
Sbjct: 491 LGACRMHNAVELAREVLDHLVELE 514
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 282/532 (53%), Gaps = 15/532 (2%)
Query: 85 FVKCDRLDCAYKIF-DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+ +C++++ A +F D R+V ++NA++ GF G + + + MR VG+ D T
Sbjct: 20 YSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFT 79
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ +A + + +H +G++ +V V + +++Y K D + AE VF +
Sbjct: 80 FPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELP 136
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
ER VV WN+M+ G T + ++ ++ M G L T S+LS + G
Sbjct: 137 ER--DVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNG 194
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H G+ V+V N LI MY KC + A ++F+ I ++ SW ++IS + Q
Sbjct: 195 RAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQC 254
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK-----D 378
D D LRLF M + LPD++T+ +++ C AL G+ Y GL D
Sbjct: 255 DDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGD 314
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V++ NA++DMY+KCG + +A +F + K V SW MI G A++G EALD+FH++
Sbjct: 315 DVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMC 374
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
E ++P+ VTF+ VL AC+H GF+ +G + + G+ P ++HY+C+ D+LGR G
Sbjct: 375 EAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVI--PTIEHYTCIIDMLGRAG 432
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPH--SAAPYVEM 556
L EA D Q +P++ + +W LL AC++H N E+G V + +LEP + Y+ M
Sbjct: 433 HLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGSYILM 492
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
++ Y + GR++ +R MK VKK PG S + F+ DR H E
Sbjct: 493 SSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFSMGDRTHHE 544
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 206/433 (47%), Gaps = 26/433 (6%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
Y + +N+ I V A +++M+ + P+ TFP + +AC + ++
Sbjct: 37 YHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEV--- 93
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IHG + K + ++K D + A K+F+E+ RDV WNAM+ G+ ++
Sbjct: 94 RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKI 153
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G L + +F M GI T + ++ +++H +G + V+V
Sbjct: 154 GHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVS 213
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I Y KC + A ++F I E + + SWNS+++ D D +L + M+ +
Sbjct: 214 NALIDMYGKCKHTEDALMIFEMINE--KDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSR 271
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-----DVSVINTLISMYSKCGD 294
DV T+ ++L + AL+ GR +H + I G DV + N ++ MY+KCG
Sbjct: 272 VLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGC 331
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ +A ++FD + ++ SW MI GYA G EAL +F M A PD+VT + ++S
Sbjct: 332 MKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSA 391
Query: 355 CGQSGALELGKWF-DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVV 412
C +G + G+ F G+ + +IDM + G +G+A +L +P E ++
Sbjct: 392 CSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLI 451
Query: 413 SWTTMIAGCALNG 425
W ++ C L+G
Sbjct: 452 LWMALLGACRLHG 464
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 162/356 (45%), Gaps = 9/356 (2%)
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
S + I+ Y++C+ ++ A LVF R V ++N+++AG D FY+ M
Sbjct: 11 SSITSLINMYSRCNQMEEAVLVFRDPYHE-RNVFAYNAIIAGFVANGLAADGFQFYKRMR 69
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
G D T ++ + C E ++ R +H G +L+V V + L++ Y K +
Sbjct: 70 SVGVMPDKFTFPCVVRA--CCE-FMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVDGTE 126
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A +F+ + +R V W AMI+GY + G L++A+ +F M G T S++S
Sbjct: 127 DAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILT 186
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
G + G+ G V V NALIDMY KC DA +F + EK + SW +
Sbjct: 187 SMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNS 246
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
+I+ + L LF +++ + P+ +T AVL AC+H L G I +
Sbjct: 247 IISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVN- 305
Query: 477 GISYNPELDHY---SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G+ N D + + D+ + G +K A D + + D W ++ +H
Sbjct: 306 GLGKNENGDDVLLNNAIMDMYAKCGCMKNA-DIIFDLMRNKDVASWNIMIMGYAMH 360
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/599 (28%), Positives = 302/599 (50%), Gaps = 7/599 (1%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIF 98
++ F + + ++P+ L +C + S+ ++ +V + + KC L A K+F
Sbjct: 10 VITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNT-YTKCGSLTDARKVF 68
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D M R V +WN+M+ ++ +F M+ G + D VT + + A ++ ++L
Sbjct: 69 DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQ 128
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
K V + D+ V I+ YA+C + A VF ++++ +++W++++
Sbjct: 129 HGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQK--NLITWSAIITA 186
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++L ++R M G + T +SLL+ F P L + +H +G D
Sbjct: 187 FADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDT 246
Query: 279 VSVINTLISMYSKC--GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
++ N L+++Y +C G++D A V+ + ++ +W +I+GY G EAL + +
Sbjct: 247 TTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRL 306
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ D VT +S+++ C S +L GK + A GL +V+V NAL +MYSKCGS+
Sbjct: 307 QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSM 366
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+AR +F ++P + VSW M+ A +GE E L L ++ + ++ N +TF++VL +C
Sbjct: 367 ENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSC 426
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+H G + +G D+GI E HY C+ DLLGR GKL+EA ++ MP + +
Sbjct: 427 SHAGLIAEGCQYFHSLGHDRGIEVKTE--HYGCLVDLLGRAGKLQEAEKYISKMPSEPEI 484
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
W +LL AC++H +++ G+ A L +L+P +++ V ++N Y+ G W A +R M
Sbjct: 485 VTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAM 544
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
+VKK PG S + K F D H + Y ++ L RE Y K +
Sbjct: 545 ASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMV 603
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 217/442 (49%), Gaps = 20/442 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WNS I + + +F++M+ + +TF I AC +L + + +
Sbjct: 75 SVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVR 134
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I ++ F +C + A ++F M +++ +W+A++ FA G
Sbjct: 135 ESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCG 194
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LR F M+ GI + VT + L L L +H G+D ++ N +
Sbjct: 195 EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALV 254
Query: 184 SSYAKCD--DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y +C+ +L +AE++ ++E + + +WN ++ G T + ++L Y+ +
Sbjct: 255 NVYGRCETGELDVAEVILQEMDE--QQITAWNVLINGYTLHGRSREALETYQRLQLEAIP 312
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D T +S+L++ +L +G+++HS+ + G D DV V N L +MYSKCG +++AR +
Sbjct: 313 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 372
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + R+ VSW M+ YAQ G+ +E L+L ME G + +T +S++S C +G +
Sbjct: 373 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 432
Query: 362 ELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
G ++F + G++ L+D+ + G + +A + +P E +V+W +++
Sbjct: 433 AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLG 492
Query: 420 GCALNGEFVEALDLFHQLMELD 441
C ++ + +L+ELD
Sbjct: 493 ACRVHKDLDRGKLAARKLLELD 514
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 126/230 (54%)
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G + +V T +++L+S V P+AL +G+ +HS LDV V L++ Y+KCG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ AR +FDG+ R+ +W +MIS Y+ EA +F M+ GE D VT LS++
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C L+ GK + ++ V ALI MY++C S +A ++F + +K +++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ +I A +G EAL F + + + PNRVTF+++L T LE+
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE 230
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 268/528 (50%), Gaps = 54/528 (10%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM-GFLENVLRLFYNMRLVGIQADF 141
+ +V+C +D A ++F++M V+ +WN++L FA+ G E +LF + Q +
Sbjct: 49 ASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP----QPN- 103
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
TV A H HL + F + + DV+ NT IS+ A+ + A +F
Sbjct: 104 -TVSYNIMLACHWHHLGV-HDARGFFDSMPLK-DVASWNTMISALAQVGLMGEARRLFSA 160
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLN-FYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ E+ VSW++MV+G D ++ FY + + S + A+
Sbjct: 161 MPEK--NCVSWSAMVSGYVACGDLDAAVECFY---------------AAPMRSVITWTAM 203
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+ G Y K G ++ A LF + RT V+W AMI+GY
Sbjct: 204 ITG-------------------------YMKFGRVELAERLFQEMSMRTLVTWNAMIAGY 238
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+ G ++ LRLF M G P+ +++ S++ GC AL+LGK C L +
Sbjct: 239 VENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDT 298
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+L+ MYSKCG + DA ELF +P K VV W MI+G A +G +AL LF ++ +
Sbjct: 299 TAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKE 358
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
L+P+ +TF+AVL AC H G ++ G D GI PE HY+CM DLLGR GKL
Sbjct: 359 GLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPE--HYACMVDLLGRAGKL 416
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
EA+D ++SMP K I+GTLL AC+IH N+ + E+ A L +L+P A YV++AN Y
Sbjct: 417 SEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVY 476
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
A RWD VA+IR MK N V K PG S IN F + DR H E
Sbjct: 477 AAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPE 524
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L RL + T+ WN+ I V A L LFR M + ++PN L+ + C+
Sbjct: 215 LAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCS 274
Query: 66 KLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNA 111
LS L + +H + K P + KC L A+++F ++ +DV WNA
Sbjct: 275 NLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNA 334
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
M+ G+AQ G + LRLF M+ G++ D++T + + A HA
Sbjct: 335 MISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHA 377
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 142/341 (41%), Gaps = 75/341 (21%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLISMYSKCGDIDSARVLFDGICDR 308
L SSFV + V SH + F+ + V N LI+ Y +CGDIDSA +F+ + +
Sbjct: 16 LTSSFV-----TLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVK 70
Query: 309 TRVSWTAMISGYAQK-GDLDEALRLFFAM----------------------EAAG----- 340
+ V+W ++++ +A+K G + A +LF + +A G
Sbjct: 71 STVTWNSILAAFAKKPGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSM 130
Query: 341 ELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
L D+ + +MIS Q G + E + F S + N + +A++ Y CG + A
Sbjct: 131 PLKDVASWNTMISALAQVGLMGEARRLF-----SAMPEKNCVSWSAMVSGYVACGDLDAA 185
Query: 400 RELFYALPEKIVVSWT-------------------------------TMIAGCALNGEFV 428
E FYA P + V++WT MIAG NG
Sbjct: 186 VECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAE 245
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS 488
+ L LF ++E ++PN ++ +VL C++ L+ G + + + + +
Sbjct: 246 DGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK---CPLSSDTTAGT 302
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + + G LK+A + +P + D W ++ H
Sbjct: 303 SLVSMYSKCGDLKDAWELFIQIP-RKDVVCWNAMISGYAQH 342
>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 288/573 (50%), Gaps = 24/573 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ I L +F Q+ + P T + +C + + + IHG
Sbjct: 6 IVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRSIHG 65
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K+ + K L+ A +F+E+ + V SWN M+ +A GF
Sbjct: 66 FGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGFFNE 125
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ +F M ++ + VT+M L A I + +H + I G+ + SV + +
Sbjct: 126 SMLVFKRMVEQKVEVNPVTIMSLLPANISPEL------IHCYAIKTGLINNGSVVTSLVC 179
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAKC ++AEL++ ++ +VS ++++ D + + M +LD
Sbjct: 180 LYAKCGSTELAELLYWSFPQK--NLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDS 237
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+VS+L P + G +H + + G D V N LISMY K DI++A LF
Sbjct: 238 VAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYE 297
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ ++ +SW ++ISG Q G +A++ F M+ G PD +TV S+++GC Q G L LG
Sbjct: 298 MPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLG 357
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ NY L+ V +LIDMY+KCGSI A +F ++ E V +W TMI+G +
Sbjct: 358 ERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISGYSWY 417
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G AL+ + ++ E L P+R+TFL VL AC H G L +G I ++ G+ P L
Sbjct: 418 GLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMV--PNL 475
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
H +CM LLGR G +EAL F+++M + D+ +WG LL AC IH I++GE +A L+
Sbjct: 476 QHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLAKKLYL 535
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMK 577
L+ + YV M+N YA RW+ A +R +MK
Sbjct: 536 LDYKNCGLYVLMSNLYAATNRWNDAAKMREIMK 568
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 195/365 (53%), Gaps = 8/365 (2%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M RD+ SWNA++ G ++ G+ + L +F + G T++GL + + +
Sbjct: 1 MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQG 60
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+S+H FGI G+D D V N YAK DL+ AEL+F +E+ ++VVSWN+M+
Sbjct: 61 RSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELED--KSVVSWNTMIGAYA 118
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
F++S+ ++ M+ ++ T++SLL + + PE L+H + I G + S
Sbjct: 119 GNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPANISPE------LIHCYAIKTGLINNGS 172
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V+ +L+ +Y+KCG + A +L+ + VS TA+IS YA+KG++D + F M+
Sbjct: 173 VVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLD 232
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D V ++S++ G + +G YA GL + +V N LI MY K I A
Sbjct: 233 MKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAI 292
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
LFY +PEK ++SW ++I+GC G +A+ F Q+ L P+ +T ++L C+ G
Sbjct: 293 SLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLG 352
Query: 461 FLEKG 465
+L G
Sbjct: 353 YLRLG 357
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 203/444 (45%), Gaps = 28/444 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ I ++++L+F++M + +E N +T + A I ++IH
Sbjct: 106 SVVSWNTMIGAYAGNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPAN------ISPELIH 159
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ +K+ + KC + A ++ +++ S A++ +A+ G ++
Sbjct: 160 CYAIKTGLINNGSVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMD 219
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
V+ F M+ + ++ D V ++ + H+S+ ++H + + G+D V N I
Sbjct: 220 LVVECFSRMQQLDMKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLI 279
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
S Y K +D++ A +F + E + ++SWNS+++GC + D++ F+ M G D
Sbjct: 280 SMYFKFNDIEAAISLFYEMPE--KPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPD 337
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
TV SLL+ L G +H++ + +++ V +LI MY+KCG I A +F
Sbjct: 338 TITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFK 397
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I + +W MISGY+ G AL + M G PD +T L +++ C G L
Sbjct: 398 SIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHE 457
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIA 419
G K F G+ N+ C ++ + + G +A + P+ V W ++
Sbjct: 458 GKKHFQIMTEEFGMVPNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAV--WGALLN 515
Query: 420 GCALNGEFVEALDLFHQLMELDLR 443
C ++ E L +L LD +
Sbjct: 516 ACCIHQEIKLGECLAKKLYLLDYK 539
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 6/262 (2%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R +VSWN+++ GC+ D+L + ++ GF TT+V L+ S E + QGR +
Sbjct: 4 RDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRSI 63
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H GI G DLD V N L MY+K GD+++A +LF+ + D++ VSW MI YA G
Sbjct: 64 HGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGFF 123
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+E++ +F M + VT++S++ + + EL YA GL +N V +L
Sbjct: 124 NESMLVFKRMVEQKVEVNPVTIMSLLPA---NISPEL---IHCYAIKTGLINNGSVVTSL 177
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ +Y+KCGS A L+++ P+K +VS T +I+ A G ++ F ++ +LD++ +
Sbjct: 178 VCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDS 237
Query: 447 VTFLAVLQACTHTGFLEKGWAI 468
V +++L T + G A+
Sbjct: 238 VAMVSILHGITDPSHMSIGIAL 259
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
++ +VSW +I GC+ NG V+AL++F QL+ P + T + ++ +C F+ +G +
Sbjct: 3 DRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRS 62
Query: 468 ISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
I GI +LD + + + + G L+ A + + KS W T++ A
Sbjct: 63 I-----HGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVS-WNTMIGA 116
>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 271/503 (53%), Gaps = 25/503 (4%)
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
F+A A AKL + K ++D A K+FD + D WN +L G
Sbjct: 150 FVASALAKL-----------------YFKLSKVDDARKVFDAVPSPDTILWNTLLAGLPG 192
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
LE +R+ R ++ D T+ +AA A H+++ + VH +G+ G+ V
Sbjct: 193 SVALEAFVRMVEVGR---VRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHV 249
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+S Y+KC D+ A +F +E+ +V++N++++G + + S+ ++ + +
Sbjct: 250 VTGLMSLYSKCGDMDCARSLFDRMEDP--DLVAYNALISGYSVNGMVESSVELFKELAAS 307
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+R + +T+V+++ + + R +H+ + D D V L ++Y + D++SA
Sbjct: 308 DWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R +FD + ++T SW AMISGYAQ G + A+ LF M+ P+ T+ S +S C Q
Sbjct: 368 RSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQL 427
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GAL LG W L+ NV V ALIDMY+KCGSI +AR +F + K VVSW MI
Sbjct: 428 GALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMI 487
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+G L+G EAL L+ +++ + P TFL+VL AC+H G +++G + + ++ I
Sbjct: 488 SGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRI 547
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS-DAGIWGTLLCACKIHLNIEIGEY 537
S P ++H +CM DLLGR GKL EALD + P + G+WG LL AC +H N ++ +
Sbjct: 548 S--PGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNSDLAKL 605
Query: 538 VAYCLFKLEPHSAAPYVEMANKY 560
+ LF+L+ +A YV ++N Y
Sbjct: 606 ASQKLFELDSENAGYYVLLSNLY 628
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
R +H + G+ D V + L +Y K +D AR +FD + + W +++G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGLPG 192
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
L+ +R+ +E PD T+ S + ++ + +G+ Y GL ++ V
Sbjct: 193 SVALEAFVRM---VEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHV 249
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
L+ +YSKCG + AR LF + + +V++ +I+G ++NG +++LF +L D
Sbjct: 250 VTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDW 309
Query: 443 RPNRVTFLAVLQACTHTG 460
RPN T +AV+ + G
Sbjct: 310 RPNSSTLVAVIPVYSPFG 327
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
LF+++ +D PN+ T + + + ++ +H +VK+ +
Sbjct: 300 LFKELAASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYC 359
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
+ + ++ A IFD M + + SWNAM+ G+AQ G E + LF M+ + +Q + T+
Sbjct: 360 RLNDMESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISS 419
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
A LSL VH ++ +V V I YAKC + A +F ++
Sbjct: 420 TLSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDN-- 477
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ VVSWN+M++G + ++L Y+ M+ +T +S+L + C
Sbjct: 478 KNVVSWNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVL--YAC---------- 525
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-----WTAMISGYA 321
SHG G +D + +F + + R+S T M+
Sbjct: 526 -SHG----------------------GLVDEGQKVFRVMTNEYRISPGIEHCTCMVDLLG 562
Query: 322 QKGDLDEALRLF--FAMEAAG 340
+ G L+EAL L F A G
Sbjct: 563 RAGKLNEALDLISEFPQSAIG 583
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WN+ I + LF+ M++ +++PN T ACA+L L +H
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVH 437
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I K + KC + A IFD M ++V SWNAM+ G+ G
Sbjct: 438 RIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGA 497
Query: 124 NVLRLFYNM 132
L+L+ +M
Sbjct: 498 EALKLYKSM 506
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
+ + G + V +AL +Y K + DAR++F A+P + W T++AG L G A
Sbjct: 140 SVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAG--LPGSV--A 195
Query: 431 LDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKG 465
L+ F +++E+ +RP+ T + L+A + G
Sbjct: 196 LEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMG 231
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 313/611 (51%), Gaps = 39/611 (6%)
Query: 47 QNDIEPNNLTFPFIAKACAKLS----DLIYSQMIHGHIVKSP---------------FVK 87
+N ++ N T+ + A A+ S L +++HGH++++ + K
Sbjct: 368 RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAK 427
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ-ADFVTVMG 146
C ++ A KIF M D SWN ++ Q G E + + MR I ++F +
Sbjct: 428 CGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISS 487
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L+ A K L+ + VH + G+D D SV N + Y +C + VF + E
Sbjct: 488 LSSCA-GLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEH- 545
Query: 207 RTVVSWNSMVA-GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
VSWN+M+ + + + + +MM G + T ++LL++ L G+
Sbjct: 546 -DEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQ 604
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT-RVSWTAMISGYAQKG 324
VH+ + +G D V N LIS Y+K GD+ S LF + DR +SW +MISGY G
Sbjct: 605 VHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNG 664
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+L EA+ + M +G++ D T +++ C ALE G + L+ +V+V +
Sbjct: 665 NLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVES 724
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
AL+DMYSKCG + A +LF ++ ++ SW +MI+G A +G +A+++F +++ P
Sbjct: 725 ALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESP 784
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQY----DDKGISYNPELDHYSCMADLLGRKGKL 500
+ VTF++VL AC+H G +E+G ++Y D GI P+++HYSC+ DLLGR GK+
Sbjct: 785 DHVTFVSVLSACSHAGLVERG-----LEYFEMMPDHGIL--PQIEHYSCVIDLLGRAGKI 837
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCAC---KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
+ +++Q MPI+ +A IW T+L AC K NI++G + L ++EP + YV +
Sbjct: 838 DKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLAS 897
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N +A G W+ A RT M++ KK G+S +N TF A DR H ++ Y L+
Sbjct: 898 NFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLN 957
Query: 618 CLALHSREEAY 628
L + R Y
Sbjct: 958 FLIQNIRNAGY 968
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 200/416 (48%), Gaps = 17/416 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + ++ + M+Q+ I P+N +CA L L Q +H V
Sbjct: 449 WNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAV 508
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML-VGFAQMGFLENVL 126
K + +C + +K+F+ MA D SWN M+ V + + ++
Sbjct: 509 KWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIV 568
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
++F NM G+ + VT + L A L L K VH+ + GV D V N IS Y
Sbjct: 569 KVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCY 628
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AK D+ E +F + +R R +SWNSM++G Y ++++ M+++G +D T
Sbjct: 629 AKSGDMGSCEHLFTNMSDR-RDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCT 687
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+L++ AL +G +H+ GI + DV V + L+ MYSKCG +D A LF+ +
Sbjct: 688 FSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMT 747
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R SW +MISGYA+ G +A+ +F M + E PD VT +S++S C +G +E G
Sbjct: 748 QRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLE 807
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
+ G+ + + +ID+ + G I +E +P E + W T++ C
Sbjct: 808 YFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVAC 863
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/554 (25%), Positives = 248/554 (44%), Gaps = 39/554 (7%)
Query: 7 PPRL-NRIYRSSTINQ---WNSQIREAVNKNEAHKTLLLFRQMKQND----IEPNNLTFP 58
PP L R++ + I WN+ + K + T LF+ M++ D + P TF
Sbjct: 219 PPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFG 278
Query: 59 FIAKACAK---------------LSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAV 103
+ A + L S + G + S F + D A IF +
Sbjct: 279 SLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQ 338
Query: 104 RDVASWNAMLVGFAQMGFLENVLRLFYNMR-LVGIQADFVTVM--GLTQAAIHAKHLSLL 160
++ + N ++VG + F E +++F R V + AD V+ L + +I + L +
Sbjct: 339 KNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIG 398
Query: 161 KSVHSFGIHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ VH + G+ D ++V N ++ YAKC ++ A +F +E R +SWN++++
Sbjct: 399 RVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDR--ISWNTIISAL 456
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
++++ Y M + ++S LSS + L G+ VH + +G DLD
Sbjct: 457 DQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDT 516
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA-QKGDLDEALRLFFAMEA 338
SV N L+ MY +CG + +F+ + + VSW M+ A + + E +++F M
Sbjct: 517 SVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMR 576
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G +P+ VT +++++ LELGK G+ ++ +V NALI Y+K G +G
Sbjct: 577 GGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGS 636
Query: 399 ARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
LF + ++ +SW +MI+G NG EA+D ++ + TF +L AC
Sbjct: 637 CEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACA 696
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIKSD 515
LE+G + GI + E D S + D+ + G++ A SM +++
Sbjct: 697 SVAALERGMELHAF-----GIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNE 751
Query: 516 AGIWGTLLCACKIH 529
W +++ H
Sbjct: 752 FS-WNSMISGYARH 764
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 193/453 (42%), Gaps = 33/453 (7%)
Query: 36 HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAY 95
H LL + + P NL I + L + + H+V S + K RL A
Sbjct: 64 HADLLPLLRRGGDANSPENLHVELIKRG------LNHDLFLCNHLVNS-YAKGARLAAAS 116
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA-------DFVTVMGLT 148
++FDEM R+ SW ++ G+ G E R+F M L +QA F T++
Sbjct: 117 QVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAM-LREVQAGCRPTSFTFGTLLRAC 175
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD--DLKMAELVFCGIEERL 206
Q L VH ++ +VCN IS Y C +A+ VF G +
Sbjct: 176 QDG-GPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTP--I 232
Query: 207 RTVVSWNSMVAGCTYGDKFD--DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R +++WN++++ Y K D + ++ M R+ + S + +L G
Sbjct: 233 RDLITWNALMS--VYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGS 290
Query: 265 L-----VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
V + G D+ V + L+S +++ G D A+ +F + + V+ +I G
Sbjct: 291 SAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVG 350
Query: 320 YAQKGDLDEALRLFFAMEAAGEL--PDLVTVLSMISGCGQS-GALELGKWFDNYACSGGL 376
++ +EA+++F ++ V +LS ++ S L +G+ + GL
Sbjct: 351 LVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGL 410
Query: 377 KD-NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
D + V N L++MY+KCG+I A ++F + +SW T+I+ NG EA+ +
Sbjct: 411 TDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYS 470
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ + + P+ ++ L +C L G +
Sbjct: 471 LMRQSCISPSNFALISSLSSCAGLKLLTAGQQV 503
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/529 (31%), Positives = 279/529 (52%), Gaps = 13/529 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC RL A ++FD M VR++ SWNA++ G+ + LF M+ VG D T
Sbjct: 136 YAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTF 195
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
L + SL++ +H + G + N I++Y++CD L + +F GIE
Sbjct: 196 AVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIES 255
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRLDV---TTVVSLLSSFVCPEAL 260
R ++SWNSM+ Y D+++ F+ MM +G + D+ T+ +S+ S C +
Sbjct: 256 R--DLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQ- 312
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD---IDSARVLFDGICDRTRVSWTAMI 317
QGR +HS I +G + V N +I+MY++ D ++ A F + + VSW +M+
Sbjct: 313 -QGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSML 371
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+GY+ G +AL+ F M A D + + + C L LG+ + G
Sbjct: 372 TGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFA 431
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N V ++LI MYSKCG +GDAR+ F + V W +M+ G A +G+ DLF+++
Sbjct: 432 SNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEM 491
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
++L++ + VTF+A++ A +H G +++G I+ + ++HY+C DL GR
Sbjct: 492 LDLEVPLDHVTFVALITAYSHGGLVDEG--SEILNTMETRYKIPMRMEHYACGVDLYGRA 549
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G+L +A + ++SMP + DA +W TLL AC+IH N+E+ VA LF EP + YV ++
Sbjct: 550 GQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLS 609
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
+ Y+ G W A ++ +M+ + K PG S + + +F A+DR H
Sbjct: 610 SMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIEVKNEVHSFNADDRSH 658
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 226/504 (44%), Gaps = 25/504 (4%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A ++FDE+ D ASWN++L G + RL M G+ A + ++
Sbjct: 41 LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLAASTFALGSALRS 100
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
A A+ L + SF + G+ +V + + YAKC L A VF G+ +R +V
Sbjct: 101 AAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMP--VRNIV 158
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SWN+++AG T K +++ + M G D TT LL++ P R +H
Sbjct: 159 SWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKI 218
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ YG L + +N I+ YS+C + +R +FDGI R +SW +M+ YA G DEA+
Sbjct: 219 VKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAM 278
Query: 331 RLFF-AMEAAGELPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNALID 388
R F M +G PD+ + S IS C + G + G+ + GL+ VCNA+I
Sbjct: 279 RFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIA 338
Query: 389 MYSKCGS---IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
MY++ + DA F +L K VSW +M+ G + +G +AL F + ++R +
Sbjct: 339 MYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTD 398
Query: 446 RVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYN----PELDHYSCMADLLGRKGK 499
A L++C+ L G + ++Q G + N L +LG K
Sbjct: 399 EFGLSAALRSCSDLAVLRLGRQVHSLVVQ---SGFASNDFVSSSLIFMYSKCGVLGDARK 455
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE-PHSAAPYVEMAN 558
E D S+P W +++ H + + + LE P +V +
Sbjct: 456 SFEEADKSSSVP-------WNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALIT 508
Query: 559 KYALGGRWD-GVANIRTMMKRNQV 581
Y+ GG D G + TM R ++
Sbjct: 509 AYSHGGLVDEGSEILNTMETRYKI 532
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 1/171 (0%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N L++ YS G + +AR +FD I SW ++++ + G +A RL AM A G
Sbjct: 30 NQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLA 88
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
+ S + + ELG +++ GL DNV +AL+D+Y+KCG +GDAR +
Sbjct: 89 ASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRV 148
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
F +P + +VSW +IAG + + EA++LF ++ + P+ TF +L
Sbjct: 149 FDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLL 199
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + + L FR M+ +I + ++C+ L+ L + +H +V
Sbjct: 367 WNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVV 426
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S F KC L A K F+E WN+M+ G+AQ G + V
Sbjct: 427 QSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTD 486
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIH 153
LF M + + D VT + L A H
Sbjct: 487 LFNEMLDLEVPLDHVTFVALITAYSH 512
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/648 (28%), Positives = 313/648 (48%), Gaps = 47/648 (7%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R + + W++ + N + +F + + + PN+ + + +AC+ SD +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN-SDFV 182
Query: 72 YSQ-------MIHGHIVKSPFVKCDRLDC----------AYKIFDEMAVRDVASWNAMLV 114
M GH V C +D AYK+FD+M+ +V +W M+
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
QMGF +R F +M L G ++D T+ + A ++LSL K +HS+ I G+
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 175 DVSVCNTWISSYAKC------DDLKMAELVFCGIEERLRTVVSWNSMVAG----CTYGDK 224
DV + + YAKC DD + VF +E+ +V+SW +++ G C
Sbjct: 303 DVEC--SLVDMYAKCSADGSVDDCRK---VFDRMEDH--SVMSWTALITGYMKNCNLAT- 354
Query: 225 FDDSLNFYRHMMYNGF----RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+++N + M+ G ++ + P G+ V G + S
Sbjct: 355 --EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV---GKQVLGQAFKRGLASNSS 409
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V N++ISM+ K ++ A+ F+ + ++ VS+ + G + + ++A +L +
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
T S++SG G++ G+ + GL N VCNALI MYSKCGSI A
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F + + V+SWT+MI G A +G + L+ F+Q++E ++PN VT++A+L AC+H G
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+ +GW Y+D I P+++HY+CM DLL R G L +A +F+ +MP ++D +W
Sbjct: 590 LVSEGWRHFNSMYEDHKI--KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
T L AC++H N E+G+ A + +L+P+ A Y++++N YA G+W+ +R MK
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ K G S + K F D H + Y LD L + Y
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 226/493 (45%), Gaps = 35/493 (7%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPF 59
+ + S P NRI N + I +N + + M ++ I P +++TF
Sbjct: 14 LPIKSQPSVSNRI------NVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSS 67
Query: 60 IAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEM---A 102
+ K+C + D +++H +++ S + K A +F+ M
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
RDV SW+AM+ + G + +++F +G+ + + +A ++ + + +
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 163 VHSFGIHIG-VDADVSVCNTWISSYAKCDD-LKMAELVFCGIEERLRTVVSWNSMVAGCT 220
F + G ++DV V + I + K ++ + A VF + E VV+W M+ C
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCM 245
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+++ F+ M+ +GF D T+ S+ S+ E L G+ +HS I G DV
Sbjct: 246 QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE 305
Query: 281 VINTLISMYSKC---GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL-DEALRLFFAM 336
+L+ MY+KC G +D R +FD + D + +SWTA+I+GY + +L EA+ LF M
Sbjct: 306 C--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Query: 337 EAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
G + P+ T S CG +GK A GL N V N++I M+ K
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ DA+ F +L EK +VS+ T + G N F +A L ++ E +L + TF ++L
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 456 CTHTGFLEKGWAI 468
+ G + KG I
Sbjct: 484 VANVGSIRKGEQI 496
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 235 MMYNGFR-LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M +G R +D T SLL S + G+LVH+ I + + D + N+LIS+YSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 294 DIDSARVLFDGI---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
D A +F+ + R VSW+AM++ Y G +A+++F G +P+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 351 MISGCGQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKC-GSIGDARELFYALPE 408
+I C S + +G+ + +G + +V V +LIDM+ K S +A ++F + E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--- 465
VV+WT MI C G EA+ F ++ ++ T +V AC L G
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 466 --WAISIIQYDDKGISYNPELDHYS-CMAD 492
WAI DD S +D Y+ C AD
Sbjct: 292 HSWAIRSGLVDDVECSL---VDMYAKCSAD 318
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 183/482 (37%), Positives = 257/482 (53%), Gaps = 12/482 (2%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
+HLS + H+ I +++ ++ I+ Y+ DD A VF GI R VVSWN+
Sbjct: 144 RHLSPV--AHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSR--DVVSWNA 199
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
M+ + R M+ +G + + T+ +L++ LV GR V
Sbjct: 200 MMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSA 259
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G + D V + L+ MY KCG+I AR +FD I D+ V+W AMI+GYAQ G +EA+ LF
Sbjct: 260 GMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLF 319
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M+ AG PD +T+ ++S C GALELG D YA GL +NV V AL+DMY+KC
Sbjct: 320 HNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKC 379
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAV 452
G + A E+F + K V SW +I G A NG+ EA+ F + D L+P+ +TF+ V
Sbjct: 380 GDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGV 439
Query: 453 LQACTHTGFLEKG--WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
L AC H G ++ G W S+ P+++HYSCM DLL R G L+E DF++ +
Sbjct: 440 LSACVHAGLVKDGKRWFNSLTSE----FQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKI 495
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
P K DA + G LL AC+ N+EIGE V + +LEP ++ YV + YA GR D A
Sbjct: 496 PDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSA 555
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
+R M+ V K PG S I+GK F A D ++ Y VLD L R E Y
Sbjct: 556 KMRGPMRERGVNKTPGCSWVEISGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVP 615
Query: 631 HL 632
+L
Sbjct: 616 NL 617
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 169/352 (48%), Gaps = 9/352 (2%)
Query: 77 HGHIVKSPFVKCDRLD---CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR 133
H H V S LD A K+F+ + RDV SWNAM+ + ++G V R+ +M
Sbjct: 162 HDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRDMV 221
Query: 134 LVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDL 192
G + + VT+ + A L L + V + G++ D V + + Y KC ++
Sbjct: 222 KDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCGEI 281
Query: 193 KMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLS 252
A VF I + + VV+WN+M+ G +++++ + +M G D T+ +LS
Sbjct: 282 AEARRVFDSIID--KDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLS 339
Query: 253 SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
+ AL G + + G +V V L+ MY+KCGD+D A +F + + S
Sbjct: 340 ACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVAS 399
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGK-WFDNY 370
W A+I G A G DEA++ F M L PD +T + ++S C +G ++ GK WF++
Sbjct: 400 WNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSL 459
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
+ + + ++D+ ++ G + + + +P+K+ V ++A C
Sbjct: 460 TSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALLAAC 511
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 54/377 (14%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
S + WN+ ++ + + R M K + PN +T + AC DL+ +
Sbjct: 191 SRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGR 250
Query: 75 MIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ G + + KC + A ++FD + +DV +WNAM+ G+AQ G
Sbjct: 251 WVEEWSKSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNG 310
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ LF+NM+ G+ D +T+ G+ A L L + + G+ +V V
Sbjct: 311 MSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGT 370
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNG 239
+ YAKC DL A VF + R + V SWN+++ G + + D+++ + M +G
Sbjct: 371 ALVDMYAKCGDLDKAIEVFRKM--RCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDG 428
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGR-------------------------LVHSHGIHYG 274
+ D T + +LS+ V + G+ L S +
Sbjct: 429 LKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHLEEV 488
Query: 275 FD--------LDVSVINTLISMYSKCGDID-SARVLFDGICDRTRVSWTAMISG--YAQK 323
+D +D ++ L++ KC +++ RV+ I SW ++S YA
Sbjct: 489 WDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASS 548
Query: 324 GDLDEALRLFFAMEAAG 340
G LD++ ++ M G
Sbjct: 549 GRLDDSAKMRGPMRERG 565
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 252/455 (55%), Gaps = 4/455 (0%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ + +G+ +D V NT I+ Y+ C A V + VSWN+++AG +
Sbjct: 115 LHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDTVSWNTIIAGYIHA 174
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ +L + M LD T+++ L + + G+L H+ + GF+++ +
Sbjct: 175 GLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMG 234
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
++LISMY+KCG ++ AR +FDG+ DR V WT+MISGY Q G EA++LF M+ AG
Sbjct: 235 SSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVK 294
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
D T+ +++S CGQ GAL+LG++ Y GL ++ V N+LIDMYSKCG I A ++
Sbjct: 295 VDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDI 354
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGF 461
F + ++ SW T+I G A NG EALDLF Q+ E + PN +TFL VL +C+H G
Sbjct: 355 FCGMVKRDNFSW-TVIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGL 413
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
+E+G+ GI+ P ++HY CM DLLGR L EA F++ MPI DA +W +
Sbjct: 414 VEQGYRHFHRMSSIYGIA--PRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRS 471
Query: 522 LLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV 581
LL AC+ + + EYVA + LEP+ V ++ YA RW +RT + +
Sbjct: 472 LLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRK 531
Query: 582 KKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
K PG S ++G F A D H E+E Y L
Sbjct: 532 TKQPGCSFIEVDGCVHEFFAGDESHFETEAIYSTL 566
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 145/286 (50%), Gaps = 10/286 (3%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D ++ + LS+ ++V G +H+ + G D V+NTLI+MYS C +AR +
Sbjct: 91 IDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSV 150
Query: 302 FD----GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
D G D VSW +I+GY G ++AL+ F M + D VT+L+ + C +
Sbjct: 151 LDSAPKGASD--TVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACAR 208
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+ +++GK + G + N + ++LI MY+KCG + DAR +F +P++ V WT+M
Sbjct: 209 TCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSM 268
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+G G+ EA+ LF + ++ + T V+ +C G L+ G + D G
Sbjct: 269 ISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVH-AYCDIHG 327
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ ++ + + D+ + G +K+A D M +K D W ++
Sbjct: 328 L--GKDISVKNSLIDMYSKCGDIKKAYDIFCGM-VKRDNFSWTVIM 370
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 17/238 (7%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S WN+ I ++ +K L F QM + + +++T ACA+ + ++
Sbjct: 158 ASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKL 217
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H +V + F KC +++ A +IFD M R+ W +M+ G+ Q+G
Sbjct: 218 CHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQ 277
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ ++LF +M++ G++ D T+ + + L L + VH++ G+ D+SV N+
Sbjct: 278 SKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNS 337
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
I Y+KC D+K A +FCG+ +R SW +++ G ++L+ + M G
Sbjct: 338 LIDMYSKCGDIKKAYDIFCGMVKRDN--FSW-TVIMGFAANGLSGEALDLFAQMEEEG 392
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/633 (29%), Positives = 308/633 (48%), Gaps = 26/633 (4%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L R+ + I WN+ I +N + K L L+ M I+ + +T + +ACA
Sbjct: 214 LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACA 273
Query: 66 KLSDLIYSQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNA 111
+ L +H +K + L+ ++ +F+ + D A WN+
Sbjct: 274 EYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNS 333
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHI 170
M+ + GF + LF MRL I+ D T+ + S+ + +H+ +
Sbjct: 334 MISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKS 393
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR--TVVSWNSMVAGCTYGDKFDDS 228
G++ D + N +S Y K + + A+ VF E++R V+SWN+M++ +
Sbjct: 394 GIELDAYLGNALLSMYVKHNQITAAQYVF----EKMRGLDVISWNTMISAFAQSMFRAKA 449
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
+ M + + + T+VSLL+ LV GR +H I G +++ S+ +L M
Sbjct: 450 FELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEM 509
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y CGD +A +F R VSW ++IS Y + + +AL LF M + E P+ VT+
Sbjct: 510 YINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELE-PNSVTI 568
Query: 349 LSMISGCGQSGALELGKWFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
+++++ C Q L LG+ Y L+ + + NA I MY++CG + A ++F L
Sbjct: 569 INILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTL 628
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
+ +VSW MI G ++G +A F Q+++ +PN V+F +VL AC+H+G G
Sbjct: 629 QTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGL 688
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ D GI+ P+L HY CM DLLGR G EA+ F+ SMPI+ DA IW LL +C
Sbjct: 689 QLFHSMVRDFGIA--PQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSC 746
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+I N ++ E + L +LEP + ++ ++N YA G W V IR ++ + K PG
Sbjct: 747 QIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPG 806
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
S I + FTA D H +SE Y L+ L
Sbjct: 807 TSWIVIGNQVHHFTATDVLHPQSERIYENLNSL 839
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 245/526 (46%), Gaps = 24/526 (4%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I V + +LLF +MK+ + PN+ T + AC ++ +L Q IHG+
Sbjct: 128 SWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYC 187
Query: 81 VKSPFVKCD------------RLDC--AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+++ D R D ++++F M VR++ SWNA++ GF +G L
Sbjct: 188 LRNGLFDMDAYVGTALVGFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKAL 247
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+L+ +M + GI+ D VT++ + QA L L +H I + D+ + N ++ Y
Sbjct: 248 KLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMY 307
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ L+ + +F + WNSM++ +++ + M + DV T
Sbjct: 308 SDNGSLESSWALFNAVPT--SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRT 365
Query: 247 VVSLLSSFVC---PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ +LS +C + + GR +H+H + G +LD + N L+SMY K I +A+ +F+
Sbjct: 366 IAIMLS--LCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFE 423
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ +SW MIS +AQ +A LF M + + T++S+++ C L
Sbjct: 424 KMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVF 483
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ +A GL+ N + +L +MY CG A +F P++ +VSW ++I+
Sbjct: 484 GRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIK 543
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
N +AL LF+ ++ +L PN VT + +L +CT L G + + +S +
Sbjct: 544 NDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQCLHAYT-TRREVSLEMD 601
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + R GKL+ A ++ +S W ++ +H
Sbjct: 602 ASLANAFITMYARCGKLQYAEKIFCTLQTRSIVS-WNAMITGYGMH 646
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/541 (25%), Positives = 245/541 (45%), Gaps = 28/541 (5%)
Query: 2 AVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA 61
+SS P + + + S WNS I+ H L + QM+ I P++ T P +
Sbjct: 11 GLSSTPEQTHLVNVS---KDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVL 67
Query: 62 KACAKLSDLIYSQMIHGHI----------VKSPFV----KCDRLDCAYKIFDEMAVRDVA 107
KAC +L+ + IH I V + V KC + A K+F EM RD+
Sbjct: 68 KACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLV 127
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SWNA++ G+ + + LF M+ G+ + TV+ L A L L + +H +
Sbjct: 128 SWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYC 187
Query: 168 IHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ G+ D D V + Y + D + ++ VF + +R +VSWN+++ G
Sbjct: 188 LRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLM--LVRNIVSWNAIITGFLNVGDCA 244
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+L Y M+ G + D T++ ++ + L G +H I + D+ ++N L+
Sbjct: 245 KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALL 304
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
+MYS G ++S+ LF+ + W +MIS Y G EA+ LF M D+
Sbjct: 305 NMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVR 364
Query: 347 TVLSMISGCG--QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ M+S C G++ G+ +A G++ + + NAL+ MY K I A+ +F
Sbjct: 365 TIAIMLSLCNDLNDGSI-WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFE 423
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ V+SW TMI+ A + +A +LF + E +++ N T +++L C L
Sbjct: 424 KMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVF 483
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G +I + G+ N L+ + + ++ G + A + P + D W +L+
Sbjct: 484 GRSIHGFAIKN-GLEINTSLN--TSLTEMYINCGDERAATNMFTRCP-QRDLVSWNSLIS 539
Query: 525 A 525
+
Sbjct: 540 S 540
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 293/625 (46%), Gaps = 52/625 (8%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+N WN I V L +F +M +PN +T I AC L L + IH
Sbjct: 318 TVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIH 377
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
K V KC D A K+F + ++ A WN M+ + G +E
Sbjct: 378 XIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVE 437
Query: 124 NVLRLFYNMRLVGIQADFVT----VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ L L +M+ G + D +T + G + + + LL + + +G+ +V
Sbjct: 438 DALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEM----VQMGLKPNVVSF 493
Query: 180 NTWISSYAKCDDLKMAELVFCGIE-ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N IS + + G+ E L+ S GC + + S+
Sbjct: 494 NVLISGFQQS-----------GLSYEALKVFRIMQSPSDGCNPNEVLNLSM--------- 533
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
R + T+ L + QG+ +H + + GF+ ++ V + L+ MY+KC D+DSA
Sbjct: 534 --RPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSA 591
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F I R VSW A+++GY +EAL+LF M G P +T + + CG
Sbjct: 592 NKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDI 651
Query: 359 GALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
A+ G+ YA L + + +ALIDMY+KCGSI DA+ +F + EK V W M
Sbjct: 652 AAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAM 711
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+ +++G A +F Q+ L + P+ +TF+++L AC G +E+GW ++
Sbjct: 712 ISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKY----FNSME 767
Query: 478 ISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
ISY L+HY+CM +LG G L EALDF++ MP DA +W TLL AC++H N EIG
Sbjct: 768 ISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIG 827
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E A LF+LEP +A Y+ ++N Y G WD N+R+ M+ ++ S +
Sbjct: 828 ERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSH 887
Query: 596 TCTFTAEDRYHAESELTYPVLDCLA 620
CTF + H E E D LA
Sbjct: 888 XCTFKGGESSHPELEEILETWDXLA 912
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 196/455 (43%), Gaps = 70/455 (15%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ + + IR + + FR M + P+ P I KAC+ + +M+H
Sbjct: 147 TVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVH 206
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G +++ + C L + +F M RDV SW A++ + + G +
Sbjct: 207 GFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXD 266
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+F+ M+L G++ D ++ L +
Sbjct: 267 EAKHIFHLMQLDGVKPDLISWSAL-----------------------------------L 291
Query: 184 SSYAKCDDLKMAELVFCGIEER--LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
S +A+ ++ +A + ER TV SWN +++GC +D+L+ + M++
Sbjct: 292 SGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPED 351
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
++ T+ S+L + +AL G+ +H +G +V V ++I MYSKCG D A +
Sbjct: 352 PNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKV 411
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F ++ W MI+ Y +G +++AL L +M+ G PD++T +++SG ++G
Sbjct: 412 FXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLK 471
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
+ GLK NV+ N LI + + G +A ++F +I+ S + GC
Sbjct: 472 TQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVF-----RIMQSPSD---GC 523
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
N +++ L +RPN +T L AC
Sbjct: 524 NPN-----------EVLNLSMRPNPITITGALPAC 547
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 186/432 (43%), Gaps = 48/432 (11%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L+ A K+ DE+ R V ++ A++ + + + + F M G+ D V + +A
Sbjct: 133 LEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKA 192
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ K VH F I V++DV V N I Y+ C DL + VF ++ER VV
Sbjct: 193 CSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQER--DVV 250
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SW ++++ D++ + + M +G + D+ + +LLS F
Sbjct: 251 SWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGF---------------- 294
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR----TRVSWTAMISGYAQKGDL 326
++ G+ID A + + +R T SW +ISG Q G L
Sbjct: 295 -------------------ARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYL 335
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
++AL +F M E P+++T+ S++ C AL LGK A G+ NV V ++
Sbjct: 336 EDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSV 395
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMYSKCGS A ++F K W MIA G+ +AL L + + +P+
Sbjct: 396 IDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDV 455
Query: 447 VTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+T+ +L G + + ++Q + P + ++ + + G EAL
Sbjct: 456 ITYNTILSGHARNGLKTQAXELLSEMVQ-----MGLKPNVVSFNVLISGFQQSGLSYEAL 510
Query: 505 DFVQSMPIKSDA 516
+ M SD
Sbjct: 511 KVFRIMQSPSDG 522
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 145/297 (48%), Gaps = 13/297 (4%)
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY-GFDLDVSVINTLISMYSKCG- 293
+ N +++ +SLL+ C L + R +H+ + S+ N L+ +Y K
Sbjct: 75 LTNSSPTEISDSISLLNR--C-STLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQW 131
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
++ AR L D I +RT ++ A+I Y + DE F M G LPD V +++
Sbjct: 132 SLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILK 191
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C +GK + ++ +V V NALI YS CG +G +R +F+++ E+ VVS
Sbjct: 192 ACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVS 251
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
WT +I+ G EA +FH LM+LD ++P+ +++ A+L G ++ ++ +
Sbjct: 252 WTALISAYMEEGLXDEAKHIFH-LMQLDGVKPDLISWSALLSGFARNGEIDLALE-TLEE 309
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCAC 526
++G+ P ++ ++ + + G L++ALD M P + ++L AC
Sbjct: 310 MPERGL--QPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPAC 364
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
RI +T++ WN+ + +N + + L LF +M ++P+++TF + AC ++ +
Sbjct: 597 RIDGRNTVS-WNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIR 655
Query: 72 YSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
+ + +HG+ K + KC + A +FD +DV WNAM+ F
Sbjct: 656 FGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAF 715
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ G N +F M L+GI D +T + L A
Sbjct: 716 SVHGMARNAFAVFXQMELLGIXPDHITFVSLLSA 749
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/633 (29%), Positives = 308/633 (48%), Gaps = 26/633 (4%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L R+ + I WN+ I +N + K L L+ M I+ + +T + +ACA
Sbjct: 214 LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACA 273
Query: 66 KLSDLIYSQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNA 111
+ L +H +K + L+ ++ +F+ + D A WN+
Sbjct: 274 EYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNS 333
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL-KSVHSFGIHI 170
M+ + GF + LF MRL I+ D T+ + S+ + +H+ +
Sbjct: 334 MISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKS 393
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR--TVVSWNSMVAGCTYGDKFDDS 228
G++ D + N +S Y K + + A+ VF E++R V+SWN+M++ +
Sbjct: 394 GIELDAYLGNALLSMYVKHNQITAAQYVF----EKMRGLDVISWNTMISAFAQSMFRAKA 449
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
+ M + + + T+VSLL+ LV GR +H I G +++ S+ +L M
Sbjct: 450 FELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEM 509
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y CGD +A +F R VSW ++IS Y + + +AL LF M + E P+ VT+
Sbjct: 510 YINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELE-PNSVTI 568
Query: 349 LSMISGCGQSGALELGKWFDNYACSG--GLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
+++++ C Q L LG+ Y L+ + + NA I MY++CG + A ++F L
Sbjct: 569 INILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTL 628
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
+ +VSW MI G ++G +A F Q+++ +PN V+F +VL AC+H+G G
Sbjct: 629 QTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGL 688
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ D GI+ P+L HY CM DLLGR G EA+ F+ SMPI+ DA IW LL +C
Sbjct: 689 QLFHSMVRDFGIA--PQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSC 746
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+I N ++ E + L +LEP + ++ ++N YA G W V IR ++ + K PG
Sbjct: 747 QIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPG 806
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
S I + FTA D H +SE Y L+ L
Sbjct: 807 TSWIVIGNQVHHFTATDVLHPQSERIYENLNSL 839
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 245/526 (46%), Gaps = 24/526 (4%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I V + +LLF +MK+ + PN+ T + AC ++ +L Q IHG+
Sbjct: 128 SWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYC 187
Query: 81 VKSPFVKCD------------RLDC--AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+++ D R D ++++F M VR++ SWNA++ GF +G L
Sbjct: 188 LRNGLFDMDAYVGTALVGFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKAL 247
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+L+ +M + GI+ D VT++ + QA L L +H I + D+ + N ++ Y
Sbjct: 248 KLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMY 307
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ L+ + +F + WNSM++ +++ + M + DV T
Sbjct: 308 SDNGSLESSWALFNAVPT--SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRT 365
Query: 247 VVSLLSSFVC---PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ +LS +C + + GR +H+H + G +LD + N L+SMY K I +A+ +F+
Sbjct: 366 IAIMLS--LCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFE 423
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ +SW MIS +AQ +A LF M + + T++S+++ C L
Sbjct: 424 KMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVF 483
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ +A GL+ N + +L +MY CG A +F P++ +VSW ++I+
Sbjct: 484 GRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIK 543
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
N +AL LF+ ++ +L PN VT + +L +CT L G + + +S +
Sbjct: 544 NDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQLAHLPLGQCLHAYT-TRREVSLEMD 601
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + R GKL+ A ++ +S W ++ +H
Sbjct: 602 ASLANAFITMYARCGKLQYAEKIFCTLQTRSIVS-WNAMITGYGMH 646
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 244/541 (45%), Gaps = 28/541 (5%)
Query: 2 AVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA 61
+SS P + + + S WNS I+ H L + QM+ I P++ T P +
Sbjct: 11 GLSSTPEQTHLVNVS---KDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVL 67
Query: 62 KACAKLSDLIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVA 107
KAC +L+ + IH G + + KC + A K+F EM RD+
Sbjct: 68 KACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLV 127
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SWNA++ G+ + + LF M+ G+ + TV+ L A L L + +H +
Sbjct: 128 SWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYC 187
Query: 168 IHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ G+ D D V + Y + D + ++ VF + +R +VSWN+++ G
Sbjct: 188 LRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLM--LVRNIVSWNAIITGFLNVGDCA 244
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+L Y M+ G + D T++ ++ + L G +H I + D+ ++N L+
Sbjct: 245 KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALL 304
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
+MYS G ++S+ LF+ + W +MIS Y G EA+ LF M D+
Sbjct: 305 NMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVR 364
Query: 347 TVLSMISGCG--QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ M+S C G++ G+ +A G++ + + NAL+ MY K I A+ +F
Sbjct: 365 TIAIMLSLCNDLNDGSI-WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFE 423
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ V+SW TMI+ A + +A +LF + E +++ N T +++L C L
Sbjct: 424 KMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVF 483
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G +I + G+ N L+ + + ++ G + A + P + D W +L+
Sbjct: 484 GRSIHGFAIKN-GLEINTSLN--TSLTEMYINCGDERAATNMFTRCP-QRDLVSWNSLIS 539
Query: 525 A 525
+
Sbjct: 540 S 540
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 290/549 (52%), Gaps = 11/549 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ C + A IFD++ +++ WN+M+ G+A L L+ M G + D T
Sbjct: 68 YAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTY 127
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +A + + VH+ + G++ DV V N+ +S Y K D++ A +VF +
Sbjct: 128 PFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVF----D 183
Query: 205 RL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R+ R + SWN+M++G + + + M +GF D TT+++LLS+ L
Sbjct: 184 RMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKV 243
Query: 263 GRLVHSHGIHYGFDLDVS---VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
G+ +H + + G V ++N++I MY C + AR LF+G+ + VSW ++ISG
Sbjct: 244 GKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISG 303
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y + GD +AL LF M G +PD VTV+S+++ C Q AL LG +Y G N
Sbjct: 304 YEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVN 363
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V+V ALI MY+ CGS+ A +F +PEK + + T M+ G ++G EA+ +F++++
Sbjct: 364 VVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLG 423
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+ P+ F AVL AC+H+G +++G I D S P HYSC+ DLLGR G
Sbjct: 424 KGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRD--YSVEPRPTHYSCLVDLLGRAGY 481
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L EA +++M +K + +W LL AC++H N+++ A LF+L P + YV ++N
Sbjct: 482 LDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNI 541
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
YA RW+ V N+R ++ + +++K P S +N F D H +S+ Y L L
Sbjct: 542 YAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDL 601
Query: 620 ALHSREEAY 628
++ Y
Sbjct: 602 NEQLKKAGY 610
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 210/444 (47%), Gaps = 31/444 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WNS IR N + L L+ +M +P+N T+PF+ KAC L + +H
Sbjct: 92 WNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVV 151
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G+ + S + K ++ A +FD M VRD+ SWN M+ GF + G
Sbjct: 152 VGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFE 211
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS---VCNTWIS 184
+F +MR G D T++ L A L + K +H + + G V + N+ I
Sbjct: 212 VFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIID 271
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY-GDKFDDSLNFYRHMMYNGFRLD 243
Y C+ + A +F G+ R++ VVSWNS+++G GD F +L + M+ G D
Sbjct: 272 MYCNCESVSCARKLFEGL--RVKDVVSWNSLISGYEKCGDAF-QALELFGRMVVVGAVPD 328
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
TV+S+L++ AL G V S+ + G+ ++V V LI MY+ CG + A +FD
Sbjct: 329 EVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFD 388
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ ++ + T M++G+ G EA+ +F+ M G PD +++S C SG ++
Sbjct: 389 EMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDE 448
Query: 364 GK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-----WTTM 417
GK F ++ + L+D+ + G + +A YA+ E + + WT +
Sbjct: 449 GKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEA----YAVIENMKLKPNEDVWTAL 504
Query: 418 IAGCALNGEFVEALDLFHQLMELD 441
++ C L+ A+ +L EL+
Sbjct: 505 LSACRLHRNVKLAVISAQKLFELN 528
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+LL S ++L Q +H+H G + + L + Y+ CG + A+ +FD I
Sbjct: 27 TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ W +MI GYA AL L+ M G+ PD T ++ CG E+G+
Sbjct: 87 KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
GGL+++V V N+++ MY K G + AR +F + + + SW TM++G NGE
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
A ++F + +R T LA+L AC L+ G I
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEI 247
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 31/324 (9%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WN+ + V EA +F M+++ + T + AC + DL + IHG
Sbjct: 190 LTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHG 249
Query: 79 HIVKSP-----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
++V++ + C+ + CA K+F+ + V+DV SWN+++ G+ + G
Sbjct: 250 YVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGD 309
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L LF M +VG D VTV+ + A L L +V S+ + G +V V
Sbjct: 310 AFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTA 369
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
I YA C L A VF + E + + + MV G + ++++ + M+ G
Sbjct: 370 LIGMYANCGSLVCACRVFDEMPE--KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVT 427
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV------INTLISMYSKCGDI 295
D ++LS+ C + G + I Y D SV + L+ + + G +
Sbjct: 428 PDEGIFTAVLSA--CSHS---GLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYL 482
Query: 296 DSARVLFDGICDRTRVS-WTAMIS 318
D A + + + + WTA++S
Sbjct: 483 DEAYAVIENMKLKPNEDVWTALLS 506
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + WNS I +A + L LF +M P+ +T + AC ++S L
Sbjct: 290 RVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGA 349
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ ++VK +V C L CA ++FDEM +++ + M+ GF G
Sbjct: 350 TVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHG 409
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ +FY M G+ D + A H+
Sbjct: 410 RGREAISIFYEMLGKGVTPDEGIFTAVLSACSHS 443
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 257/482 (53%), Gaps = 12/482 (2%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
+HLS + H+ I +++ ++ I+ Y+ DD A VF GI R VVSWN+
Sbjct: 144 RHLSPV--AHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSR--DVVSWNA 199
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
M+ + R M+ +G + + T+ +L++ LV GR V
Sbjct: 200 MMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSA 259
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G + D V + L+ MY KCG+I AR +FD I D+ V+W AMI+GYAQ G +EA+ LF
Sbjct: 260 GMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLF 319
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M+ AG PD +T+ ++S C GALELG D YA GL +NV V AL+DMY+KC
Sbjct: 320 HNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKC 379
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAV 452
G + A E+F + K V SW +I G A NG+ EA+ F + D L+P+ +TF+ V
Sbjct: 380 GDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGV 439
Query: 453 LQACTHTGFLEKG--WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
L AC H G ++ G W S+ P+++HYSCM D L R G L+E DF++ +
Sbjct: 440 LSACVHAGLVKDGKRWFNSLTSE----FQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKI 495
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
P K DA + G LL AC+ N+EIGE V + +LEP ++ YV + YA GR D A
Sbjct: 496 PDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSA 555
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
+R +M+ V K PG S I+GK F A D ++ Y VLD L R E Y
Sbjct: 556 KMRGLMRERGVNKTPGCSWVEISGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVP 615
Query: 631 HL 632
+L
Sbjct: 616 NL 617
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 168/352 (47%), Gaps = 9/352 (2%)
Query: 77 HGHIVKSPFVKCDRLD---CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR 133
H H V S LD A K+F+ + RDV SWNAM+ + ++G V R+ +M
Sbjct: 162 HDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLRDMV 221
Query: 134 LVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDL 192
G + + VT+ + A L L + V + G++ D V + + Y KC ++
Sbjct: 222 KDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKCGEI 281
Query: 193 KMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLS 252
A VF I + + VV+WN+M+ G +++++ + +M G D T+ +LS
Sbjct: 282 AEARRVFDSIID--KDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLS 339
Query: 253 SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
+ AL G + + G +V V L+ MY+KCGD+D A +F + + S
Sbjct: 340 ACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVAS 399
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGK-WFDNY 370
W A+I G A G DEA++ F M L PD +T + ++S C +G ++ GK WF++
Sbjct: 400 WNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSL 459
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
+ + + ++D ++ G + + + +P+K+ V ++A C
Sbjct: 460 TSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAVMLGALLAAC 511
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 54/377 (14%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
S + WN+ ++ + + R M K + PN +T + AC DL+ +
Sbjct: 191 SRDVVSWNAMMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGR 250
Query: 75 MIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ G + + KC + A ++FD + +DV +WNAM+ G+AQ G
Sbjct: 251 WVEEWSKSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNG 310
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ LF+NM+ G+ D +T+ G+ A L L + + G+ +V V
Sbjct: 311 MSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGT 370
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNG 239
+ YAKC DL A VF + R + V SWN+++ G + + D+++ + M +G
Sbjct: 371 ALVDMYAKCGDLDKAIEVFRKM--RCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDG 428
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGR-------------------------LVHSHGIHYG 274
+ D T + +LS+ V + G+ L S +
Sbjct: 429 LKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEV 488
Query: 275 FD--------LDVSVINTLISMYSKCGDID-SARVLFDGICDRTRVSWTAMISG--YAQK 323
+D +D ++ L++ KC +++ RV+ I SW ++S YA
Sbjct: 489 WDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASS 548
Query: 324 GDLDEALRLFFAMEAAG 340
G LD++ ++ M G
Sbjct: 549 GRLDDSAKMRGLMRERG 565
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 295/558 (52%), Gaps = 40/558 (7%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF---YNMRL 134
G + S + K + AY +F ++ +++ SWNA+ + + ++L+LF N
Sbjct: 41 GSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNS 100
Query: 135 VGIQADFVTVM-GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLK 193
++ D TV L A + L K VHSF + G++ D+ V N I+ Y++CD+L
Sbjct: 101 TDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELV 160
Query: 194 MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLS 252
+A ++F + ER VSWN+M+AG + G +++ +R M+ + + + T VS+L
Sbjct: 161 LARIMFDRMPER--DTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQ 218
Query: 253 SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF------DGIC 306
+ L G VH +DVS+ N +I +Y+KCG +D AR LF DGI
Sbjct: 219 ACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGIT 278
Query: 307 ------------------------DRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
+R R+ +W A+ISG Q + A+ +F AM++ G
Sbjct: 279 YCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGC 338
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
P+ VT+ S++ L+ GK YA N+ V A+ID Y+KCG + A+
Sbjct: 339 RPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQL 398
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F + + +++WT++I+ A++G+ AL LF++++ ++P++VTF +VL AC H+G
Sbjct: 399 VFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGE 458
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
L++ W I + + GI P ++HY+CM +L R GKL +A++F+ MP++ A +WG
Sbjct: 459 LDEAWKIFNVLLPEYGI--QPLVEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGA 516
Query: 522 LLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV 581
LL + ++E+G+YV LF++EP + YV MAN Y+ GRW IR +MK ++
Sbjct: 517 LLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRL 576
Query: 582 KKFPGQSLFHINGKTCTF 599
KK PG S +G F
Sbjct: 577 KKIPGNSWIETSGGMQRF 594
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 159/372 (42%), Gaps = 51/372 (13%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQN-DIEPNNLTFPFIAKACAKLS 68
+R+ T++ WN+ + + LFR M + +++PN LT + +ACA+ +
Sbjct: 166 FDRMPERDTVS-WNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSN 224
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRD--------- 105
DL + +H + +S + KC LD A ++F+EM +D
Sbjct: 225 DLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMIS 284
Query: 106 ----------------------VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+ +WNA++ G Q E + +F M+ G + + VT
Sbjct: 285 GYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVT 344
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + H L K +H + I D ++ V I SYAKC L A+LVF I+
Sbjct: 345 LASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIK 404
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
R++++W S+++ + +L+ + M+ NG + D T S+L++ L +
Sbjct: 405 G--RSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEA 462
Query: 264 -RLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DSARVLFDGICDRTRVSWTAMISGYA 321
++ + YG V ++ + S+ G + D+ + + T W A+++G +
Sbjct: 463 WKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGAS 522
Query: 322 QKGDLDEALRLF 333
GD++ +F
Sbjct: 523 VAGDVELGKYVF 534
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 284/556 (51%), Gaps = 33/556 (5%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +FD + + WN M G A + L+L+ M +G+ + T L
Sbjct: 51 DGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLL 110
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV---------- 198
++ + + +H + G D D+ + + IS Y + L+ A+ V
Sbjct: 111 KSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVV 170
Query: 199 -----FCGIEER--------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
G R ++ VVSWN+ ++G + ++L ++ MM
Sbjct: 171 SYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN 230
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R D +T+V++LS+ ++ GR VHS +GF ++ ++N LI +YSKCG++++A
Sbjct: 231 VRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETAC 290
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF G+ ++ +SW +I GY EAL LF M +GE P+ VT+LS++S C G
Sbjct: 291 GLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLG 350
Query: 360 ALELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
A+++G+W Y G+ + + +LIDMY+KCG I A+++F ++ + + SW M
Sbjct: 351 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I G A++G A D+F ++ + + P+ +TF+ +L AC+H+G L+ G I + +
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR--HIFRSMTRD 468
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
P+L+HY CM DL G G KEA + +M ++ D IW +LL ACK+H N+E+GE
Sbjct: 469 YKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGES 528
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A L K+EP + YV ++N YA RW+ VA R ++ +KK PG S I+
Sbjct: 529 YAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 588
Query: 598 TFTAEDRYHAESELTY 613
F D++H + Y
Sbjct: 589 EFIIGDKFHPRNREIY 604
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + L LF++M + ++ P+ T + ACA+ + + +H I
Sbjct: 203 WNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIN 262
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
F KC L+ A +F ++ +DV SWN ++ G+ M + L
Sbjct: 263 DHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALL 322
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-----GVDADVSVCNTW 182
LF +M G + + VT++ + A H + + + +H ++I GV S+ +
Sbjct: 323 LFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIH---VYIDKRLKGVTNASSLRTSL 379
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I YAKC D++ A+ VF + R++ SWN+M+ G + + + + + M NG
Sbjct: 380 IDMYAKCGDIEAAQQVFDSMLN--RSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 437
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVL 301
D T V LLS+ C H G DL + ++ Y ++
Sbjct: 438 DDITFVGLLSA--CS--------------HSGMLDLGRHIFRSMTRDYKLMPKLE----- 476
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
+ MI G EA ++ ME PD V S++ C G +
Sbjct: 477 ----------HYGCMIDLXGHSGLFKEAEKMINTMEME---PDGVIWCSLLKACKMHGNV 523
Query: 362 ELGKWF 367
ELG+ +
Sbjct: 524 ELGESY 529
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 187/601 (31%), Positives = 290/601 (48%), Gaps = 33/601 (5%)
Query: 64 CAKLSDLIYSQMIHGHIVKSP----------------------FVKCDRLDCAYKIFDEM 101
C + +L IH I+K P + KC A +FD M
Sbjct: 44 CGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYM 103
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI------QADFVTVMGLTQAAIHAK 155
VRD SWN M+ GF + G + + F M +A T++
Sbjct: 104 PVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGI 163
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
S+ + +H G + +++V N I+SY KC+ VF + ER VV+W ++
Sbjct: 164 STSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIER--NVVTWTAV 221
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++G + ++DSL + M G +V T +S L + + L G+ +H G
Sbjct: 222 ISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLG 281
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
D+ + + L+ +YSKCG +D+A +F+ + VS T ++ +AQ G +EA+++F
Sbjct: 282 MQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFT 341
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M A G D V +++ G L LGK + +N V N L++MYSKCG
Sbjct: 342 KMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCG 401
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ D+ +FY + +K VSW ++IA A +G+ +AL + ++ + P VTFL++L
Sbjct: 402 DLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLH 461
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+H G +EKG + +D GIS P +HY+C+ D+LGR G L EA F++ +P
Sbjct: 462 ACSHAGLVEKGMELLESMTNDHGIS--PRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHG 519
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
+W LL AC IH + E+G+Y A LF P S APYV MAN Y+ G W A+
Sbjct: 520 GVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERASSIK 579
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
MK V K G S I K +F D+ H E+++ + VL L H ++E Y K+
Sbjct: 580 RMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKHLKDEGYVPDKKF 639
Query: 635 I 635
I
Sbjct: 640 I 640
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 151/342 (44%), Gaps = 29/342 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W + I +L LF QM+ + PN LT+ AC+ L L Q IHG +
Sbjct: 218 WTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLL 277
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + KC LD A++IF+ D S +LV FAQ GF E +
Sbjct: 278 WKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAI 337
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
++F M +G++ D V + +L+L K +HS I + V N ++ Y
Sbjct: 338 QIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMY 397
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVT 245
+KC DL + LVF + + + VSWNS++A +GD F +L FY M G
Sbjct: 398 SKCGDLSDSLLVFYQMTQ--KNSVSWNSVIAAFARHGDGF-KALQFYEEMRVEGVAPTDV 454
Query: 246 TVVSLLSSFVCPEA-LVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T +SLL + C A LV+ L+ S +G ++ M + G ++ A+
Sbjct: 455 TFLSLLHA--CSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFI 512
Query: 303 DGICDRTRV-SWTAMISGYAQKGDLD----EALRLFFAMEAA 339
+G+ + V W A++ + GD + A RLF A A+
Sbjct: 513 EGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPAS 554
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 257/470 (54%), Gaps = 6/470 (1%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+ VH + +G D+ V N+ + Y+ C A VF E +R VVSW +++G
Sbjct: 125 EQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVF--DEMLVRDVVSWTGLISGYV 182
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
FD+++N + M +V T VS+L + L G+ VH F + +
Sbjct: 183 RTGLFDEAINLFLKM---DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLV 239
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V N L+ MY KC + AR LFD + DR VSWT++ISG Q ++L LF+ M+ +G
Sbjct: 240 VGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISG 299
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
PD + + S++S C GAL+ G+W Y G++ ++ + AL+DMY+KCG I A
Sbjct: 300 VEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMAL 359
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F +P + + +W ++ G A++G EAL F ++ +RPN VTFLA+L AC H+G
Sbjct: 360 HIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSG 419
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+ +G + Q + +++P L+HY CM DLL R G L EA F+++MP+ D IWG
Sbjct: 420 LVAEGRSY-FYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWG 478
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
LL ACK + N+E+ + + L +L+ + YV ++N YA RWD V +R +MK
Sbjct: 479 ALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKG 538
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
++KFPG S+ ++G+ F D H+ +E + +L+ LA E + S
Sbjct: 539 IRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILANQVYLEGHFS 588
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 207/446 (46%), Gaps = 22/446 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ I + L++ ++ N P+ TFP + KAC K + + +HG V
Sbjct: 73 YNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAV 132
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F+ C + A ++FDEM VRDV SW ++ G+ + G + +
Sbjct: 133 KMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAIN 192
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M +V A FV+V+ A +LS+ K VH + V N + Y
Sbjct: 193 LFLKMDVVPNVATFVSVL---VACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYV 249
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC+ L A +F + + R +VSW S+++G + DSL + M +G D +
Sbjct: 250 KCECLCEARKLFDELPD--RDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIIL 307
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ AL GR V + G + D+ + L+ MY+KCG I+ A +F+GI +
Sbjct: 308 TSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPN 367
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-- 365
R +W A++ G A G EAL+ F M AG P+ VT L++++ C SG + G+
Sbjct: 368 RNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSY 427
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
++ + + +ID+ + G + +A + +P V+ W +++ C N
Sbjct: 428 FYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKAN 487
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFL 450
G + ++ L+EL + + V L
Sbjct: 488 GNVELSQEILSHLLELKSQDSGVYVL 513
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 9/321 (2%)
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+ +N+++A + Y ++ NGF D+ T +L + + +G VH
Sbjct: 71 LPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGV 130
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ GF D+ V N+L+ YS CG A +FD + R VSWT +ISGY + G DEA
Sbjct: 131 AVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEA 190
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+ LF M+ +P++ T +S++ CG+ G L +GK ++V NAL+DM
Sbjct: 191 INLFLKMDV---VPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDM 247
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y KC + +AR+LF LP++ +VSWT++I+G + ++L+LF+ + + P+R+
Sbjct: 248 YVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIIL 307
Query: 450 LAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
+VL AC G L+ G W I+ +GI ++ + + + D+ + G ++ AL
Sbjct: 308 TSVLSACASLGALDYGRWVQEYIE--RQGIEWDIHIG--TALVDMYAKCGCIEMALHIFN 363
Query: 509 SMPIKSDAGIWGTLLCACKIH 529
+P + W LL +H
Sbjct: 364 GIP-NRNIFTWNALLGGLAMH 383
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W S I V + +L LF M+ + +EP+ + + ACA L L Y + +
Sbjct: 269 IVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQE 328
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+I + + KC ++ A IF+ + R++ +WNA+L G A G
Sbjct: 329 YIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHE 388
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L+ F M GI+ + VT + + A H+
Sbjct: 389 ALKHFELMIGAGIRPNEVTFLAILTACCHS 418
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/634 (28%), Positives = 311/634 (49%), Gaps = 25/634 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WNS + V + L LFR M+ N+ T + + CA+L L + +H
Sbjct: 232 VASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHA 291
Query: 79 HIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++K + K R+D A ++F ++A +D SWN+ML + Q F
Sbjct: 292 ALLKCGSELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEA 351
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ F M G Q D V+ L+ A H L+ + H++ I + D+ V NT +
Sbjct: 352 IDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDM 411
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC ++ + VF + +R +SW +++A + ++L + G +D
Sbjct: 412 YIKCGSIECSAKVFESMG--IRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSM 469
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+ S+L + +++ + VH + I G LD+ + N LI +Y +CG+ D + LF +
Sbjct: 470 MIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRV 528
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ VSWT+MI+ G L+ A+ LF M+ A PD V ++S++ +L GK
Sbjct: 529 EKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGK 588
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ V ++L+DMYS CGS+ A +F K VV WT MI ++G
Sbjct: 589 QVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHG 648
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---WAISIIQYDDKGISYNP 482
+A+DLF ++++ L P+ V+FLA+L AC+H+ +E+G I + +Y K P
Sbjct: 649 HGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLK-----P 703
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+HY+C+ D+LGR G+ +EA +F+++MP+ + +W LL AC++H N + A L
Sbjct: 704 WQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKL 763
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
+LEP + Y+ ++N +A G+W+ RT M ++K P S I TFT+
Sbjct: 764 LELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSG 823
Query: 603 DRYHAESELTYPVL-DCLALHSREEAYSSHLKWI 635
D H +SE + L + + RE Y +++
Sbjct: 824 DYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFV 857
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 253/535 (47%), Gaps = 31/535 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE---PNNLTFPFIAKACAKLSDLIY 72
+ T+ WN+ + ++ A + + ++ M+ + P+ T + KAC D
Sbjct: 123 ARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRC 182
Query: 73 SQMIHGHIVK--------------SPFVKCDRLDCAYKIFD--EMAVRDVASWNAMLVGF 116
+HG VK + KC LD A ++F+ + RDVASWN+++ G
Sbjct: 183 GGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
Q G L LF M+ G + T + + Q LSL + +H+ + G + ++
Sbjct: 243 VQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI 302
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
CN + YAK + A VF I E + +SWNSM++ + ++++F+ M+
Sbjct: 303 Q-CNALLVMYAKYGRVDSALRVFGQIAE--KDYISWNSMLSCYVQNSFYAEAIDFFGEML 359
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+GF+ D VVSL S+ L GR H++ I D+ V NTL+ MY KCG I+
Sbjct: 360 QHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIE 419
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+ +F+ + R +SWT +++ +AQ EAL + ++ G + D + + S++ C
Sbjct: 420 CSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCC 479
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
++ L K YA GL D ++ N LID+Y +CG + LF + +K +VSWT+
Sbjct: 480 GLKSISLLKQVHCYAIRNGLLDLILE-NRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTS 538
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYD 474
MI C NG A+ LF ++ + +++P+ V +++L A L KG + +I+ +
Sbjct: 539 MINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRN 598
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ E S + D+ G + A+ + K D +W ++ A +H
Sbjct: 599 -----FPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMH 647
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 250/540 (46%), Gaps = 30/540 (5%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV---GIQADF 141
+ +C R+D A ++F+ M R V SWNA++ + G +R++ MR G D
Sbjct: 105 YGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDG 164
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T+ + +A VH + +G+D V N I YAKC L A VF
Sbjct: 165 CTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEW 224
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA-- 259
+++ R V SWNS+V+GC + ++L +R M GF ++ T V++L VC E
Sbjct: 225 LQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQ--VCAELGL 282
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L GR +H+ + G +L++ N L+ MY+K G +DSA +F I ++ +SW +M+S
Sbjct: 283 LSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSC 341
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y Q EA+ F M G PD V+S+ S G L G+ F YA L +
Sbjct: 342 YVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTD 401
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V N L+DMY KCGSI + ++F ++ + +SWTT++A A + EAL++ +L +
Sbjct: 402 LQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQK 461
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRK 497
+ + + ++L+ C +IS+++ N LD + + D+ G
Sbjct: 462 EGIMVDSMMIGSILETCCGLK------SISLLKQVHCYAIRNGLLDLILENRLIDIYGEC 515
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLL--CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
G+ +L+ Q + K D W +++ C LN + + ++P S A
Sbjct: 516 GEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSI 574
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPV 615
+ +A + ++ K QV F + F I G + + D Y + Y +
Sbjct: 575 LV----------AIAGLSSLTKGKQVHGFLIRRNFPIEGPVVS-SLVDMYSGCGSMNYAI 623
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 111/212 (52%), Gaps = 8/212 (3%)
Query: 262 QGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
+GR VH+H + G D D + L+ MY +CG +D AR LF+G+ RT SW A++
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 319 GYAQKGDLDEALRLFFAMEAA---GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
Y G EA+R++ AM A+ G PD T+ S++ CG G G A G
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPE--KIVVSWTTMIAGCALNGEFVEALDL 433
L + +V NALI MY+KCG + A +F L + + V SW ++++GC NG +EAL L
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
F + N T +AVLQ C G L G
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLG 286
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 197/680 (28%), Positives = 332/680 (48%), Gaps = 81/680 (11%)
Query: 22 WNSQIREAVNKN---EAHKTLLLFRQMKQND----------------IEPNNLTFPFIAK 62
WN+ I ++ N EAHK LF M + D +E F +
Sbjct: 82 WNTMIAGYLHNNMVEEAHK---LFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPD 138
Query: 63 ACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
KL ++ MI G + K R D A K+F++M V+D+ S+N+ML G+ Q G +
Sbjct: 139 ---KLDTACWNAMIAG------YAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKM 189
Query: 123 ENVLRLF----------YNMRLVGI--QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ F +N+ + G D + L + +S + + F H
Sbjct: 190 GLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHG 249
Query: 171 G-VDA----------DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
V+A +V N I++Y + DL++ E V E + VSW +M+ G
Sbjct: 250 KIVEARKLFDRMPCKNVVSWNAMIAAYVQ--DLQIDEAVKLFKETPYKDCVSWTTMINGY 307
Query: 220 TYGDKFDDSLNFYRHMMY---------------NGFRLDVTTVVSLLSS--FVCPEALV- 261
K D++ Y M Y NG + + V S L+ +C +++
Sbjct: 308 VRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIA 367
Query: 262 ----QGRLVHSHGIHYGFDLDVSVI-NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
GR+ + + + +V NT+IS Y++ G++D A +F+ + R +SW ++
Sbjct: 368 GYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSL 427
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I+G+ Q G +AL+ M G+ PD T +S C AL++GK G
Sbjct: 428 ITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGY 487
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+++ V NALI MY+KCG + A ++F + ++SW ++I+G ALNG EA F Q
Sbjct: 488 INDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQ 547
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ P+ VTF+ +L AC+H G +G + + + +G + P +HYSC+ DLLGR
Sbjct: 548 MSSEGTVPDEVTFIGMLSACSHAGLTNQG--VDLFKCMIEGFAIEPLAEHYSCLVDLLGR 605
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
G+L+EA + V+ M +K++AG+WG+LL AC++H N+E+G+ A L +LEPH+A+ Y+ +
Sbjct: 606 MGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITL 665
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+N +A GRW+ V +R +M+ + K PG S + + F ++D +E +L
Sbjct: 666 SNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIIL 725
Query: 617 DCLALHSREEAYSSHLKWIP 636
+ L+ H R++ S +K +P
Sbjct: 726 NTLSAHMRDKCNISDMKSVP 745
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 197/427 (46%), Gaps = 62/427 (14%)
Query: 71 IYSQMIHGH-----IVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++S +IH + + + F K R+ A ++FD+M+ R++ SWN M+ G+ +E
Sbjct: 39 VFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEA 98
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+LF L+ + +F + +T + + L K+ F + + D + N I+
Sbjct: 99 HKLF---DLMAERDNFSWALMIT---CYTRKGMLEKARELFEL-VPDKLDTACWNAMIAG 151
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM---------- 235
YAK AE VF + ++ +VS+NSM+AG T K ++ F+ M
Sbjct: 152 YAKKGRFDDAEKVFEKMP--VKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNL 209
Query: 236 MYNGF--RLDVTTVVSLLSSFVCPEALV----------QGRLVHSHGIHYGFDL----DV 279
M GF D+ + L P A+ G++V + + FD +V
Sbjct: 210 MVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKL---FDRMPCKNV 266
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
N +I+ Y + ID A LF + VSWT MI+GY + G LDEA ++ M
Sbjct: 267 VSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM--- 323
Query: 340 GELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
D+ +++SG Q+G + E + F K + + N++I Y + G + +
Sbjct: 324 -PYKDVAAKTALMSGLIQNGRIDEASQVFSQLN-----KRDAICWNSMIAGYCQSGRMSE 377
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A LF +P K VSW TMI+G A GE A ++F + +R N +++ +++
Sbjct: 378 ALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEA---MGVR-NVISWNSLI----- 428
Query: 459 TGFLEKG 465
TGFL+ G
Sbjct: 429 TGFLQNG 435
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 189/438 (43%), Gaps = 70/438 (15%)
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
K ++D A ++F + ++ A++N+M+ FA+ G + + +LF M Q + V+
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS----QRNLVSWNT 84
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ +H ++++ H + + D I+ Y + L+ A +F + ++L
Sbjct: 85 MIAGYLHN---NMVEEAHKL-FDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKL 140
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
T WN+M+AG +FDD+ + M
Sbjct: 141 DTAC-WNAMIAGYAKKGRFDDAEKVFEKMPVK---------------------------- 171
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
D+ N++++ Y++ G + A F+ + +R VSW M++G+ DL
Sbjct: 172 -----------DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDL 220
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNA 385
A LF + P+ V+ ++M+ G + G + E K FD C NV+ NA
Sbjct: 221 GSAWELFEKIPD----PNAVSWVTMLCGFARHGKIVEARKLFDRMPCK-----NVVSWNA 271
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
+I Y + I +A +LF P K VSWTTMI G G+ EA ++++Q+ D+
Sbjct: 272 MIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAK 331
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
A++ G +++ + I +N + Y + G++ EAL+
Sbjct: 332 ----TALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYC-------QSGRMSEALN 380
Query: 506 FVQSMPIKSDAGIWGTLL 523
+ MP+K +A W T++
Sbjct: 381 LFRQMPVK-NAVSWNTMI 397
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 137/321 (42%), Gaps = 28/321 (8%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+ + V S+ IH + N+++++++K G + AR LFD + R VSW MI+GY
Sbjct: 35 EAKRVFSNVIHKNH----ATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYL 90
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
++EA +LF M E + L MI+ + G LE + K +
Sbjct: 91 HNNMVEEAHKLFDLM---AERDNFSWAL-MITCYTRKGMLEKARELFELVPD---KLDTA 143
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
NA+I Y+K G DA ++F +P K +VS+ +M+AG NG+ A+ F ++ E +
Sbjct: 144 CWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERN 203
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+ + + C L W + D +S+ L ++ R GK+
Sbjct: 204 VVSWNLMVAGFVNNCD----LGSAWELFEKIPDPNAVSWVTMLCGFA-------RHGKIV 252
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS-AAPYVEMANKY 560
EA MP K+ W ++ A L I+ A LFK P+ + M N Y
Sbjct: 253 EARKLFDRMPCKNVVS-WNAMIAAYVQDLQID----EAVKLFKETPYKDCVSWTTMINGY 307
Query: 561 ALGGRWDGVANIRTMMKRNQV 581
G+ D + M V
Sbjct: 308 VRVGKLDEAREVYNQMPYKDV 328
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/456 (36%), Positives = 249/456 (54%), Gaps = 5/456 (1%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K L+ + VH I D+ + NT ++ YAKC L+ A VF + ER V+W +
Sbjct: 65 KLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPER--DFVTWTT 122
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+++G + D+ D+L + M+ GF + T+ S++ + G +H + G
Sbjct: 123 LISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 182
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
FD +V V + L+ +Y++ G +D A+++FD + R VSW A+I+G+A++ ++AL LF
Sbjct: 183 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQ 242
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M G P + S+ C +G LE GKW Y G K N L+DMY+K G
Sbjct: 243 GMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSG 302
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
SI DAR++F L ++ VVSW +++ A +G EA+ F ++ +RPN ++FL+VL
Sbjct: 303 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLT 362
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+H+G L++GW + D GI E HY + DLLGR G L AL F++ MPI+
Sbjct: 363 ACSHSGLLDEGWHYYELMKKD-GIVL--EAWHYVTIVDLLGRAGDLNRALRFIEEMPIEP 419
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
A IW LL AC++H N E+G Y A +F+L+P P+V + N YA GGRW+ A +R
Sbjct: 420 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 479
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
MK + VKK P S I F A D H + E
Sbjct: 480 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQRE 515
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 185/401 (46%), Gaps = 22/401 (5%)
Query: 44 QMKQNDIEPNNLT-----FPFIAKACAKLSDLIYSQMIHGHIVKSPF------------- 85
+ ND+E + + + + K C L +++HGH+++S F
Sbjct: 36 KFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNM 95
Query: 86 -VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
KC L+ A K+FD+M RD +W ++ G++Q + L LF M G + T+
Sbjct: 96 YAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTL 155
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ +AA + +H F + G D++V V + + Y + + A+LVF +E
Sbjct: 156 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 215
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R VSWN+++AG + +L ++ M+ GFR + SL + L QG+
Sbjct: 216 --RNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGK 273
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH++ I G L NTL+ MY+K G I AR +FD + R VSW ++++ YAQ G
Sbjct: 274 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 333
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+EA+ F M G P+ ++ LS+++ C SG L+ G + G+
Sbjct: 334 FGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYV 393
Query: 385 ALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
++D+ + G + A +P E W ++ C ++
Sbjct: 394 TIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 434
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 9/310 (2%)
Query: 223 DKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
D D+SL F + + + +D +LL + L QGR+VH H I F D+ +
Sbjct: 29 DSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVM 88
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
NTL++MY+KCG ++ AR +FD + +R V+WT +ISGY+Q +AL LF M G
Sbjct: 89 NNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGF 148
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
P+ T+ S+I G + G NV V +AL+D+Y++ G + DA+
Sbjct: 149 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 208
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F AL + VSW +IAG A +AL+LF ++ RP+ ++ ++ AC+ TGF
Sbjct: 209 VFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGF 268
Query: 462 LEKG-WAIS-IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
LE+G W + +I+ +K +++ + + D+ + G + +A + K D W
Sbjct: 269 LEQGKWVHAYMIKSGEKLVAFAG-----NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSW 322
Query: 520 GTLLCACKIH 529
+LL A H
Sbjct: 323 NSLLTAYAQH 332
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 126/313 (40%), Gaps = 17/313 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + L+LF QM + PN T + KA A +HG V
Sbjct: 120 WTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 179
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F + +D A +FD + R+ SWNA++ G A+ E L
Sbjct: 180 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALE 239
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M G + + L A L K VH++ I G NT + YA
Sbjct: 240 LFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYA 299
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + A +F + + R VVSWNS++ ++++ ++ M G R + +
Sbjct: 300 KSGSIHDARKIFDRLAK--RDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISF 357
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDGIC 306
+S+L++ L +G + G L+ T++ + + GD++ A R + +
Sbjct: 358 LSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPI 417
Query: 307 DRTRVSWTAMISG 319
+ T W A+++
Sbjct: 418 EPTAAIWKALLNA 430
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 277/540 (51%), Gaps = 37/540 (6%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
+N++L ++ G + + +R VG + D ++ + +A L +H F
Sbjct: 82 FNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAF 141
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDD 227
I +D V + YA C + A VF + +R VV+WN+M+ C +G D+
Sbjct: 142 KIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQR--DVVTWNTMIERYCRFG-LLDE 198
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+ + M + D + +++S+ + R ++ I +D ++ L++
Sbjct: 199 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVT 258
Query: 288 MY-------------------------------SKCGDIDSARVLFDGICDRTRVSWTAM 316
MY SK G +D ARV+FD + V WT M
Sbjct: 259 MYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTM 318
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
IS YA+ EALR+F M +G PD+VT+LS+IS C G L+ KW Y GL
Sbjct: 319 ISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGL 378
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ + + NALI+MY+KCG + AR++F +P + VVSW++MI A++GE ++L LF Q
Sbjct: 379 ESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQ 438
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGR 496
+ + ++ PN VTF+ VL C+H+G +E+G I D+ I+ P+++HY CM DL GR
Sbjct: 439 MKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT--PKIEHYGCMVDLFGR 496
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEM 556
L+EAL+ ++SMP+ + IWG+L+ AC++H +E+GE A + KLEP V M
Sbjct: 497 ANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLM 556
Query: 557 ANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+N YA RWD V IR +M++ +V K G S +NGK+ F D+ H +S Y L
Sbjct: 557 SNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKL 616
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 221/453 (48%), Gaps = 49/453 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS +R+ E T+L +++++ + ++FP I KA +K+S L +HG
Sbjct: 82 FNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAF 141
Query: 82 K-----SPFVK---------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K PFV+ C R++ A +FDEM+ RDV +WN M+ + + G L+ +
Sbjct: 142 KIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFK 201
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD------------ 175
LF M+ + D + + + A ++ ++++ F I V D
Sbjct: 202 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYA 261
Query: 176 --------------VSVCNTWISS-----YAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+SV N ++S+ Y+K L A ++F E ++ +V W +M+
Sbjct: 262 GAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTE--MKDLVCWTTMI 319
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ D ++L + M +G + DV T++S++S+ V L + + VH + G +
Sbjct: 320 SAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLE 379
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ + N LI+MY+KCG +D+AR +F+ + R VSW++MI+ +A G+ ++L LF M
Sbjct: 380 SVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQM 439
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
+ P+ VT + ++ GC SG +E G K F + + + ++D++ +
Sbjct: 440 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANL 499
Query: 396 IGDARELFYALP-EKIVVSWTTMIAGCALNGEF 427
+ +A E+ ++P VV W ++++ C ++GE
Sbjct: 500 LREALEVIESMPMAPNVVIWGSLMSACRVHGEL 532
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 164/352 (46%), Gaps = 37/352 (10%)
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+ +NS++ + + ++ FY+ + + G R D + +L + AL +G +H
Sbjct: 80 IVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGF 139
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
D V L+ MY+ CG I+ AR +FD + R V+W MI Y + G LDEA
Sbjct: 140 AFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEA 199
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN-------------------- 369
+LF M+ + +PD + + +++S CG++G + + +
Sbjct: 200 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTM 259
Query: 370 YACSGGLK-----------DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
YA +G + N+ V A++ YSK G + DAR +F K +V WTTMI
Sbjct: 260 YAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMI 319
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKG 477
+ A + EAL +F ++ ++P+ VT L+V+ AC + G L+K W + G
Sbjct: 320 SAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLN--G 377
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ +D+ + ++ + G L A D + MP ++ W +++ A +H
Sbjct: 378 LESVLPIDN--ALINMYAKCGGLDAARDVFEKMPTRNVVS-WSSMINAFAMH 426
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 286/579 (49%), Gaps = 29/579 (5%)
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
M+H H++K+ + KC + A K+FD + R+V W ++ G+ Q
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
E + +F +M G T+ A + ++L K H+F I + D S+ N
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
S Y+K L + F E+ V+SW ++++ C + L + M++
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEK--DVISWTTIISACGDNGRAGMGLRLFIEMLFENV 178
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ T+ S+LS ++ G VHS G + ++ + N+L+ +Y KCG ID A+
Sbjct: 179 EPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKN 238
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDL-----------DEALRLFFAMEAAGELPDLVTVL 349
LF+ + + ++W AMI+G+AQ DL EAL ++ + +G PDL T+
Sbjct: 239 LFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLS 298
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S+++ C + ALE G+ G +V+V AL+DMY KCGSI AR+ F + +
Sbjct: 299 SILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
++SWT+MI A +G+ AL LF + RPN++TF+ VL AC+H G +++ A+
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDE--ALE 416
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ K P +DHY C+ D+ R G+L EA D ++ M ++ + IW L+ C+ H
Sbjct: 417 YFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNH 476
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N E+G Y A L KL+P S YV + N Y RW+ V+ +R +MK +V K S
Sbjct: 477 GNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSR 536
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
I G+ +F +R H + + +L+ L ++ Y
Sbjct: 537 ISIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGY 575
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 215/477 (45%), Gaps = 46/477 (9%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
PR N + W + + V ++ + +F M ++ P+N T AC+ L
Sbjct: 42 PRRNVVV-------WTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSL 94
Query: 68 SDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML 113
+ + H I+K S + K LD + K F E +DV SW ++
Sbjct: 95 ESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTII 154
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G LRLF M ++ + T+ + + L VHS +G +
Sbjct: 155 SACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHE 214
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG-----DKFD-- 226
+++ + N+ + Y KC + A+ +F +E + +++WN+M+AG D F
Sbjct: 215 SNLRITNSLVYLYLKCGCIDEAKNLFNRME--YKNLITWNAMIAGHAQAMDLAKDNFSAQ 272
Query: 227 ----DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVS 280
++L Y + +G + D+ T+ S+L+ VC AL QG +H+ I GF DV
Sbjct: 273 QTGTEALGMYLKLNRSGRKPDLFTLSSILT--VCSRLAALEQGEQIHAQTIKSGFLSDVV 330
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V L+ MY KCG I+ AR F + RT +SWT+MI+ +A+ G AL+LF M AG
Sbjct: 331 VGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAG 390
Query: 341 ELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ +T + +++ C +G + E ++F+ +K + L+DM+ + G + +A
Sbjct: 391 FRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEA 450
Query: 400 RELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
++ + P + + W +IAGC +G E L + L L+P VL
Sbjct: 451 FDVIKRMDVEPNEFI--WLLLIAGCRNHGN--EELGFYAAEQLLKLKPRSTETYVVL 503
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 185/648 (28%), Positives = 313/648 (48%), Gaps = 47/648 (7%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R + + W++ + N + +F + + + PN+ + + +AC+ SD +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN-SDFV 182
Query: 72 YSQ-------MIHGHIVKSPFVKCDRLDC----------AYKIFDEMAVRDVASWNAMLV 114
M GH V C +D AYK+FD+M+ +V +W M+
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
QMGF +R F +M L G ++D T+ + A ++LSL K +HS+ I G+
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 175 DVSVCNTWISSYAKC------DDLKMAELVFCGIEERLRTVVSWNSMVAG----CTYGDK 224
DV + + YAKC DD + VF +E+ +V+SW +++ G C
Sbjct: 303 DVEC--SLVDMYAKCSADGSVDDCRK---VFDRMEDH--SVMSWTALITGYMKNCNLAT- 354
Query: 225 FDDSLNFYRHMMYNGF----RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+++N + M+ G ++ + P G+ V G + S
Sbjct: 355 --EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV---GKQVLGQAFKRGLASNSS 409
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V N++ISM+ K ++ A+ F+ + ++ VS+ + G + + ++A +L +
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
T S++SG G++ G+ + GL N VCNALI MYSKCGSI A
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F + + V+SWT+MI G A +G + L+ F+Q++E ++PN VT++A+L AC+H G
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+ +GW Y+D I P+++HY+CM DLL R G L +A +F+ +MP ++D +W
Sbjct: 590 LVSEGWRHFNSMYEDHKI--KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
T L AC++H N E+G+ A + +L+P+ A Y++++N YA G+W+ +R MK
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ K G S + K F D H + Y LD L + Y
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 222/478 (46%), Gaps = 29/478 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKACAKLSDLIYSQ 74
S+ IN + I +N + + M ++ I P +++TF + K+C + D +
Sbjct: 23 SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGK 82
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEM---AVRDVASWNAMLVGFA 117
++H +++ S + K A +F+ M RDV SW+AM+ +
Sbjct: 83 LVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYG 142
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADV 176
G + +++F +G+ + + +A ++ + + + F + G ++DV
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 177 SVCNTWISSYAKCDD-LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + I + K ++ + A VF + E VV+W M+ C +++ F+ M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--- 292
+ +GF D T+ S+ S+ E L G+ +HS I G DV +L+ MY+KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSAD 318
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEL-PDLVTVLS 350
G +D R +FD + D + +SWTA+I+GY + +L EA+ LF M G + P+ T S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
CG +GK A GL N V N++I M+ K + DA+ F +L EK
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+VS+ T + G N F +A L ++ E +L + TF ++L + G + KG I
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 235 MMYNGFR-LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M +G R +D T SLL S + G+LVH+ I + + D + N+LIS+YSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 294 DIDSARVLFDGI---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
D A +F+ + R VSW+AM++ Y G +A+++F G +P+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 351 MISGCGQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKC-GSIGDARELFYALPE 408
+I C S + +G+ + +G + +V V +LIDM+ K S +A ++F + E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--- 465
VV+WT MI C G EA+ F ++ ++ T +V AC L G
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 466 --WAISIIQYDDKGISYNPELDHYS-CMAD 492
WAI DD S +D Y+ C AD
Sbjct: 292 HSWAIRSGLVDDVECSL---VDMYAKCSAD 318
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 295/624 (47%), Gaps = 50/624 (8%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+N WN I V L +F +M +PN +T I AC L L + IH
Sbjct: 9 TVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIH 68
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+K V KC D A K+F + ++ A WN M+ + G +E
Sbjct: 69 AIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVE 128
Query: 124 NVLRLFYNMRLVGIQADFVT----VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ L L +M+ G + D +T + G + + + LL + + +G+ +V
Sbjct: 129 DALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEM----VQMGLKPNVVSF 184
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N IS + + + L + E L+ S GC + + S+
Sbjct: 185 NVLISGF------QQSGLSY----EALKVFRIMQSPSDGCNPNEVLNLSM---------- 224
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R + T+ L + QG+ +H + + GF+ ++ V + L+ MY+KC D+DSA
Sbjct: 225 -RPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSAN 283
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F I R VSW A+++GY +EAL+LF M G P +T + + CG
Sbjct: 284 KVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIA 343
Query: 360 ALELGKWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
A+ G+ YA L + + +ALIDMY+KCGSI DA+ +F + EK V W MI
Sbjct: 344 AIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMI 403
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+ +++G A +F Q+ L + P+ +TF+++L AC G +E+GW ++ I
Sbjct: 404 SAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKY----FNSMEI 459
Query: 479 SYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
SY L+HY+CM +LG G L EALDF++ MP DA +W TLL AC++H N EIGE
Sbjct: 460 SYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGE 519
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A LF+LEP +A Y+ ++N Y G WD N+R+ M+ ++ S +
Sbjct: 520 RAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHI 579
Query: 597 CTFTAEDRYHAESELTYPVLDCLA 620
CTF + H E E D LA
Sbjct: 580 CTFKGGESSHPELEEILEAWDKLA 603
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
RI +T++ WN+ + + + + L LF +M ++P+++TF + AC ++ +
Sbjct: 288 RIDGRNTVS-WNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIR 346
Query: 72 YSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
+ + +HG+ K + KC + A +FD +DV WNAM+ F
Sbjct: 347 FGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAF 406
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
+ G N +F M L+GI D +T + L A
Sbjct: 407 SVHGMARNAFAVFVQMELLGILPDHITFVSLLSA 440
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 313/621 (50%), Gaps = 48/621 (7%)
Query: 34 EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDC 93
E H L L + K +I I K + + S++IH V SP L
Sbjct: 27 EQHPYLNLLEKCK--NINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAV-SP---SGDLSY 80
Query: 94 AYKIFDEMAVR---DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
A +F+E +V WN+++ G++ + L LF M G+Q + T L ++
Sbjct: 81 ALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKS 140
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF----------- 199
AK K +H+ + + + + V + I YA ++ A LVF
Sbjct: 141 CTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSF 200
Query: 200 -----------CGIEER-------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
C + R ++ VVSWN+M++G +F++++ + M
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ +T+V +LS+ + G+ + S GF ++ + N LI MY KCG+ D AR L
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIAREL 320
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FDGI ++ +SW MI GY+ +EAL LF M + P+ VT L ++ C GAL
Sbjct: 321 FDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGAL 380
Query: 362 ELGKWFDNYACSGGLKD--NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+LGKW Y L++ N + +LIDMY+KCG I A +F ++ + + SW M++
Sbjct: 381 DLGKWVHAY-IDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLS 439
Query: 420 GCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDK 476
G A++G AL LF +++ L RP+ +TF+ VL ACT G ++ G + S+IQ D
Sbjct: 440 GFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQ--DY 497
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
GIS P+L HY CM DLL R K +EA +++M ++ D IWG+LL ACK H +E GE
Sbjct: 498 GIS--PKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGE 555
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
YVA LF+LEP +A +V ++N YA GRWD VA IRT + +KK PG + I+G
Sbjct: 556 YVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDV 615
Query: 597 CTFTAEDRYHAESELTYPVLD 617
F D++H E Y +L+
Sbjct: 616 HEFLVGDKFHPECNNIYKMLN 636
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 221/470 (47%), Gaps = 53/470 (11%)
Query: 11 NRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL 70
N+ + + WNS IR + +L LF +M ++PN+ TFPF+ K+C K
Sbjct: 88 NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147
Query: 71 IYSQMIHGHIVK---------------------------------------------SPF 85
+ +H H +K + +
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
V LD A ++FDE+ V+DV SWNAM+ G+ Q G E + FY M+ + + T++
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ A H + L K + S+ G +++ + N I Y KC + +A +F GIEE
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEE- 326
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ V+SWN+M+ G +Y ++++L + M+ + + + T + +L + C AL G+
Sbjct: 327 -KDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW 385
Query: 266 VHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH++ + + S+ +LI MY+KCG I++A +F + R SW AM+SG+A G
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHG 445
Query: 325 DLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMV 382
+ AL LF M G PD +T + ++S C Q+G ++LG ++F + G+ +
Sbjct: 446 HAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQH 505
Query: 383 CNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG--EFVE 429
+ID+ ++ +A L + E W ++++ C +G EF E
Sbjct: 506 YGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGE 555
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 150/361 (41%), Gaps = 51/361 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I V + ++ F +M++ ++ PN T + AC + I +
Sbjct: 231 WNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVR 290
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC D A ++FD + +DV SWN M+ G++ + E L
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF-GIHIGVDADVSVCNTWISSY 186
LF M ++ + VT +G+ A L L K VH++ ++ ++ S+ + I Y
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMY 410
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVT 245
AKC ++ AE VF + R + SWN+M++G + +L + M+ G FR D
Sbjct: 411 AKCGCIEAAERVFRSMHS--RNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDI 468
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T V +LS A Q LV DL ++I Y GI
Sbjct: 469 TFVGVLS------ACTQAGLV---------DLGHQYFRSMIQDY--------------GI 499
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ + + MI A+ +EA L ME PD S++S C G +E G+
Sbjct: 500 SPKLQ-HYGCMIDLLARAEKFEEAEILMKNMEME---PDGAIWGSLLSACKAHGRVEFGE 555
Query: 366 W 366
+
Sbjct: 556 Y 556
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 281/538 (52%), Gaps = 17/538 (3%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
DV SWN+++ A+ G LR F +MR + + + +A + K H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
G +D+ V + I Y+ C L+ A VF I +R +VSW SM+ G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR--NIVSWTSMIRGYDLNGN 157
Query: 225 FDDSLNFYRHMMYN------GFRLDVTTVVSLLSSFVCPEALVQG--RLVHSHGIHYGFD 276
D+++ ++ ++ LD +VS++S+ C +G +HS I GFD
Sbjct: 158 ALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISA--CSRVAAKGLTESIHSFVIKRGFD 215
Query: 277 LDVSVINTLISMYSKCGD--IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
VSV NTL+ Y+K G+ + AR +FD I D+ RVS+ +++S YAQ G +EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFR 275
Query: 335 AMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ + + +T+ +++ SGAL +GK + GL+D+V+V ++IDMY KC
Sbjct: 276 RLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR F + K V SWT MIAG ++G +AL+LF +++ +RPN +TF++VL
Sbjct: 336 GRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G + GW G+ P L+HY CM DLLGR G L++A D +Q M ++
Sbjct: 396 AACSHAGLHDVGWHWFNAMKGRFGV--EPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKME 453
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
D+ IW +LL AC+IH N+E+ E LF+L+P + Y+ +++ YA GRW V +R
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVR 513
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
MK + K PG SL +NG+ F D H + E Y L L E Y S+
Sbjct: 514 MTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 231/466 (49%), Gaps = 35/466 (7%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L NR + + WNS I + ++ + L F M++ + P +FP KAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 65 AKLSDLIYSQMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWN 110
+ L D+ + H V S + C +L+ A K+FDE+ R++ SW
Sbjct: 87 SSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVTVMGLTQ-----AAIHAKHLSLLKS 162
+M+ G+ G + + LF ++ + D F+ MG+ + + AK L+ +S
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLT--ES 204
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDD--LKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+HSF I G D VSV NT + +YAK + + +A +F I ++ R VS+NS+++
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVYA 262
Query: 221 YGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+++ + +R ++ + T+ ++L + AL G+ +H I G + DV
Sbjct: 263 QSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V ++I MY KCG +++AR+ FD + ++ SWTAMI+GY G +AL LF AM +
Sbjct: 323 IVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 340 GELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G P+ +T +S+++ C +G ++G WF+ G++ + ++D+ + G +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 399 ARELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
A +L + P+ I+ W++++A C ++ A +L ELD
Sbjct: 443 AYDLIQKMKMEPDSII--WSSLLAACRIHKNVELAEISVARLFELD 486
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 187/570 (32%), Positives = 299/570 (52%), Gaps = 50/570 (8%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L+ A K+F + + +N ++ FA+ G + L LF +R G+ D T + +A
Sbjct: 87 LNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKA 146
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ +S + + G++ D V N+ I YA+ + +++F + +R V+
Sbjct: 147 IGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDR--DVI 204
Query: 211 SWNSMVAGCTYGDKFDDSLN-FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
SWN M++G +F+D++N F R +G D TVVS LS+ + L G+ +H
Sbjct: 205 SWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIH-- 262
Query: 270 GIHYGFD------------LDV--------------------SVI--NTLISMYSKCGDI 295
HY D LD+ +VI T++S Y+ CG++
Sbjct: 263 --HYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGEL 320
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ AR LF+G R V WTAMI+GY Q DEA+ LF M+ PD V+S+++GC
Sbjct: 321 EEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGC 380
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
Q+GA+E GKW + + + +V ALI+MY+KCG I A E+FY L K SWT
Sbjct: 381 AQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWT 440
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
++I G A+NG+ +AL+LF ++ + +RP+ +TF+ VL AC+H G +E+G ++
Sbjct: 441 SIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKF----FNS 496
Query: 476 KGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA---GIWGTLLCACKIHL 530
+ Y P+++HY C+ DLLGR G L EA + ++ +P ++ A ++G+LL AC+I+
Sbjct: 497 MRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYG 556
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
N+E+GE VA L K E ++ + +AN YA RW+ V +R MK VKK PG S
Sbjct: 557 NVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSI 616
Query: 591 HINGKTCTFTAEDRYHAESELTYPVLDCLA 620
++ F + H E Y +L+ +A
Sbjct: 617 EVDSIIHEFFSGHPSHPEMREIYYMLNIMA 646
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 224/484 (46%), Gaps = 51/484 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N I+ K +TL+LF +++++ + P+N T+PF+ KA L ++ ++ + G +
Sbjct: 105 YNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVT 164
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + + D +FDEM RDV SWN M+ G+ + E+ +
Sbjct: 165 KTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAIN 224
Query: 128 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M+ G+ D TV+ A K L L K +H + + V + N + Y
Sbjct: 225 VFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY-VRDNVKFTPIIGNALLDMY 283
Query: 187 AKCDDLKMAELVF--------------------CG-IEER--------LRTVVSWNSMVA 217
KC L +A VF CG +EE +R VV W +M+
Sbjct: 284 CKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMIN 343
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G ++FD+++ +R M + D VVSLL+ A+ QG+ +H +
Sbjct: 344 GYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPI 403
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D V LI MY+KCG I+ A +F G+ + SWT++I G A G +AL LF M+
Sbjct: 404 DAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMK 463
Query: 338 AAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
AG PD +T + ++S C G +E G K+F++ +K V L+D+ + G +
Sbjct: 464 QAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLL 523
Query: 397 GDARELFYALPEK----IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV-TFLA 451
+A EL +P++ V + ++++ C + G + QL++ + + V T LA
Sbjct: 524 NEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLA 583
Query: 452 VLQA 455
+ A
Sbjct: 584 NIYA 587
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 144/328 (43%), Gaps = 16/328 (4%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC--GDIDSARVLFDGICDRTRVSWTA 315
+++ + +H+ G D+ +N L++ + G+++ A +F I + +
Sbjct: 48 KSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNL 107
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+I +A+KG+ L LF + G PD T + G G + + G
Sbjct: 108 IIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTG 167
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
L+ + V N+LIDMY++ + LF +P++ V+SW MI+G F +A+++F
Sbjct: 168 LEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFC 227
Query: 436 QLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++ E L P+ T ++ L ACT LE G I Y + + P + + + D+
Sbjct: 228 RMQEESGLMPDEATVVSTLSACTALKRLELGKKIH--HYVRDNVKFTPIIGN--ALLDMY 283
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI-EIGEYVAYCLFKLEP-HSAAP 552
+ G L A + MP K + W T++ + N E+ E A LF+ P
Sbjct: 284 CKCGCLSIARAVFEEMPSK-NVICWTTMVSG---YANCGELEE--ARELFEGSPIRDVVI 337
Query: 553 YVEMANKYALGGRWD-GVANIRTMMKRN 579
+ M N Y R+D VA R M R
Sbjct: 338 WTAMINGYVQFNRFDEAVALFREMQIRK 365
>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
Length = 916
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 176/588 (29%), Positives = 303/588 (51%), Gaps = 29/588 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I+ V + ++ + +F++M+ + +P+ T I AC L + +HG+I+
Sbjct: 336 WNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPEGKEVHGYII 394
Query: 82 KSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL-ENV 125
K ++KC+ A +F M +RD+ SWN M+ G+++ L E
Sbjct: 395 KKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEA 454
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+F + G+ TV+ + + + L+ KSVHSF + G VS N+ I
Sbjct: 455 KAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHM 514
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL--D 243
Y C D +A + ++SWN+ + GC + D+L ++ M++ L D
Sbjct: 515 YICCGD-SLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQ-FMHSTLTLNPD 572
Query: 244 VTTVVSLLSSFVCPEALVQ--GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T+VS+LS VC +Q G+ +H + + ++ V N L++MY + GD +SA ++
Sbjct: 573 SITLVSVLS--VCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELI 630
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + R SW MISG+AQ + AL+ + ME P+ ++++ +I C Q G L
Sbjct: 631 FSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKMEYFE--PNEISIVGIICACTQLGDL 688
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
GK + GL+ NV + +L+DMYSKCG + + +F + EK + W +MI+
Sbjct: 689 RQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAF 748
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+G ++++++F ++ ++ R TF+A+L AC+H+G ++G + + GI
Sbjct: 749 GFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPT 808
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
PE H+ C+ D+LGR G+L+EA FV+S+P K G+WG LL AC +++ E VA
Sbjct: 809 PE--HHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKH 866
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
L LEP ++ YV M+N YA W G +R +++ + K G+S+
Sbjct: 867 LLCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSI 914
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 215/443 (48%), Gaps = 22/443 (4%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FDE A D+ WNA + + + LF M V D +++ + A
Sbjct: 117 ALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASR 176
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVS 211
A+ L + H + +D D+S+ NT + YAKC D +E+VF +R+ R S
Sbjct: 177 ARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVF----QRMPYRDTTS 232
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ-GRLVHSHG 270
WNSMV+G + + S +++ M+ + F+ D ++ +LS+ + L G VHS
Sbjct: 233 WNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSV 292
Query: 271 IHYGF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I G+ D SV N+LI+ Y + G ++A +F ++ V+W AMI G + ++EA
Sbjct: 293 IKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEA 352
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALID 388
+ +F M + + PD+ T++++IS CG G L GK Y G + + V N+L+D
Sbjct: 353 MCMFQEMRSKNQ-PDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLD 411
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF-VEALDLFHQLMELDLRPNRV 447
+Y KC AR LF +P + ++SW TMI+G + N EA +F L+ L
Sbjct: 412 LYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLS 471
Query: 448 TFLAVLQACTHTGFLEKGWAIS--IIQYDD-KGISYNPELDH-YSCMADLLGRKGKLKEA 503
T +AV+ +C L G ++ I++Y G+S L H Y C D L A
Sbjct: 472 TVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLA-------A 524
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
++S+ SD W T + C
Sbjct: 525 FSLLESITPMSDIISWNTAIVGC 547
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 193/391 (49%), Gaps = 11/391 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC + +F M RD SWN+M+ G G E F M QAD V++
Sbjct: 209 YAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSL 268
Query: 145 MGLTQAAIHAKHL-SLLKSVHSFGIHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ A H K L S +SVHS I +G D SV N+ I+ Y + + AE VF
Sbjct: 269 SCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLST 328
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+ +V+WN+M+ G D+ ++++ ++ M + DV T+V+++S+ L +
Sbjct: 329 SN--KNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPE 385
Query: 263 GRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G+ VH + I G + SV N+L+ +Y KC D +AR+LF + R +SW MISGY+
Sbjct: 386 GKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYS 445
Query: 322 QKGDL-DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+ L +EA +F + + G L TV+++I C L GK ++ G V
Sbjct: 446 RNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGV 505
Query: 381 MVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
N+LI MY CG A L ++ P ++SW T I GC NG + +AL+ F Q M
Sbjct: 506 SAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAF-QFMH 564
Query: 440 --LDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
L L P+ +T ++VL C + G +I
Sbjct: 565 STLTLNPDSITLVSVLSVCGNLKLQSLGKSI 595
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 164/353 (46%), Gaps = 12/353 (3%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D V + I++Y++ D+ A VF E ++ WN+ ++ T ++ D++ +R
Sbjct: 97 DPPVRTSVITAYSRVRDVCSALQVF--DEAAAPDLILWNAAISALTLNCRYGDAVVLFRW 154
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ D T++V +LS +L G H + D D+S+ NTL+ MY+KCGD
Sbjct: 155 MVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGD 214
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
S+ V+F + R SW +M+SG G + + F M + D V++ ++S
Sbjct: 215 FYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSA 274
Query: 355 CGQSGAL-ELGKWFDNYACSGGLKDNV-MVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
C L G+ + G +D V N+LI Y + G A E+F + K +V
Sbjct: 275 CSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLV 334
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--I 470
+W MI G N EA+ +F ++ + +P+ T + ++ AC G L +G + I
Sbjct: 335 TWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPEGKEVHGYI 393
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
I+ KG Y E + + DL + A ++MP++ D W T++
Sbjct: 394 IK---KGHIYE-ECSVGNSLLDLYMKCNDPSTARILFRTMPMR-DLISWNTMI 441
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
LD V ++I+ YS+ D+ SA +FD + W A IS +A+ LF M
Sbjct: 96 LDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWM 155
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ D +++ M+SG ++ +LE G F A L ++ + N L+DMY+KCG
Sbjct: 156 VDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDF 215
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
+ +F +P + SW +M++G NG + F +++ + + V+ VL AC
Sbjct: 216 YSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSAC 275
Query: 457 TH 458
+H
Sbjct: 276 SH 277
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 290/572 (50%), Gaps = 23/572 (4%)
Query: 79 HIVKSPFVK-CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
+++KS F K R C +F+E+ RDV +W AM+VGF +F M +
Sbjct: 48 NLIKSYFDKGLTREAC--NLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA-KCDDLKMAE 196
Q + T+ + +A K LS HS G+D V V N + YA C + A
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTY-GDKFDDSLNFYRHMMY-----NGFRLDVTT-VVS 249
VF I L+T VSW +++AG T+ GD + L F R M+ N F + +
Sbjct: 166 SVFNDIP--LKTAVSWTTLIAGFTHRGDGYSGLLAF-RQMLLEDVGPNSFSFSIAARACA 222
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
+SS+ C G+ +H+ YG D V+N+++ MY +C + A+ F + ++
Sbjct: 223 SISSYSC------GKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKN 276
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
++W +I+GY ++ D E+L LFF M + G P+ T S+ + C L G+
Sbjct: 277 LITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHG 335
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
G NV + N+LIDMY+KCGSI D+ +LF +P + +VSWTTM+ G +G E
Sbjct: 336 GIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKE 395
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
A+ LF ++++ ++P+R+ F+ VL C+H G ++KG +D I NP+ + Y C
Sbjct: 396 AVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNI--NPDQEIYRC 453
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
+ DLLGR G+++EA V++MP + D +WG LL ACK + +G A + P+
Sbjct: 454 VVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNM 513
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAES 609
A Y+ ++ YA G+W A +R +MK KK G+S I + +F +
Sbjct: 514 AGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHI 573
Query: 610 ELTYPVLDCLALHSREEAYSSHLKWIPEHEAG 641
E + V+D L H +++ + L +I ++ G
Sbjct: 574 EWVHKVIDVLIWHMKDDGDVTDLDYIVDYLEG 605
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 203/441 (46%), Gaps = 22/441 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
W + I + N H+ +F +M +++++PN T + KAC + L + H
Sbjct: 77 WTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLAT 136
Query: 79 --HIVKSPFVK----------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
I +S +V+ C +D A +F+++ ++ SW ++ GF G + L
Sbjct: 137 KHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGL 196
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M L + + + +A S K +H+ G+ D V N+ + Y
Sbjct: 197 LAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMY 256
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C+ L A+ F + E + +++WN+++AG D +SL+ + M G++ + T
Sbjct: 257 CRCNYLCDAKRCFGELTE--KNLITWNTLIAGYERSDS-SESLSLFFQMGSEGYKPNCFT 313
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+ ++ L G+ VH + GFD +V++IN+LI MY+KCG I + LF +
Sbjct: 314 FTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMP 373
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
R VSWT M+ GY G EA++LF M +G PD + + ++ GC +G ++ G K
Sbjct: 374 GRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLK 433
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+F + + + + ++D+ + G + +A +L +P E W ++ C
Sbjct: 434 YFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGAC--K 491
Query: 425 GEFVEALDLFHQLMELDLRPN 445
+ L LD RPN
Sbjct: 492 AYKLSNLGNLAAQRVLDRRPN 512
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 22/305 (7%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T W + I ++ + + LL FRQM D+ PN+ +F A+ACA +S + IH
Sbjct: 175 TAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIH 234
Query: 78 GHIVK------SP--------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ K +P + +C+ L A + F E+ +++ +WN ++ G+ + E
Sbjct: 235 AAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSE 294
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ L LF+ M G + + T +T A + LS + VH + G D +V++ N+ I
Sbjct: 295 S-LSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLI 353
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + + +FC + R +VSW +M+ G +++ + M+ +G + D
Sbjct: 354 DMYAKCGSISDSHKLFCDMPG--RDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPD 411
Query: 244 VTTVVSLLSSFVCPEA-LVQGRLVHSHGI--HYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ +L C A LV L + + Y + D + ++ + + G ++ A
Sbjct: 412 RIVFMGVLCG--CSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQ 469
Query: 301 LFDGI 305
L + +
Sbjct: 470 LVENM 474
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 183/611 (29%), Positives = 309/611 (50%), Gaps = 21/611 (3%)
Query: 34 EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------- 84
E ++ L FR M P+++ + +AC +L L ++ HG+I+K
Sbjct: 180 EINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDS 239
Query: 85 -----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
+ KC L A +F+ + R ++W AM+ + G+L+ L LF +M+ ++
Sbjct: 240 SLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEP 299
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN-TWISSYAKCDDLKMAELV 198
+ VT+ + ++ + L KSVH I +DA++ T + YA + E +
Sbjct: 300 NSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKI 359
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
I R + WN++++ ++++ + M GF D ++ S LS+
Sbjct: 360 LHEIGGR--GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEG 417
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L G +H H I F +D V N+LI+MYSKCG +D A ++FD + + V+W +MIS
Sbjct: 418 ELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMIS 476
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
G +Q G +A+ LF M V +S+I C G LE GKW + + G++
Sbjct: 477 GLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRK 536
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ + AL+DMY+KCG + A+ +F + E+ VVSW+++I+ ++G+ E + LF +++
Sbjct: 537 CIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKML 596
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
E ++PN VT + VL AC+H G +++G + D GI P+ +H+ C+ DLL R G
Sbjct: 597 ESGIKPNDVTVMNVLSACSHAGCVKEG-MLFFNSMRDFGI--EPKREHFVCIVDLLSRAG 653
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
L EA + ++ MP A IWG LL C+IH ++I + + L+ ++ Y ++N
Sbjct: 654 DLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSN 713
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDC 618
YA GG W+ +R+MMK +KK P S+ + K F A D + + + TY +
Sbjct: 714 IYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAGDASYPQLKYTYSTFNN 773
Query: 619 LALHSREEAYS 629
SREE S
Sbjct: 774 AQRSSREEVSS 784
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 248/537 (46%), Gaps = 24/537 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R + S W ++ V + + L+ QM I+ N+ TFP + +AC+ DL
Sbjct: 57 RTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLG 116
Query: 72 YSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
Q +HG I+KS F + LD A K+F EM +RD+ SW++++
Sbjct: 117 VGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVV 176
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
+ G + L F M G D V V+ + +A L L KS H + + G++ D
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V ++ I YAKC L+ AE+VF + R+ +W +M++ G ++L + M
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVT--YRSTSTWTAMISSYNLGGYLKEALALFVSMQK 294
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDID 296
+ T+ +L S L +G+ VH I D ++ + TL+ +Y+ D
Sbjct: 295 TEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHD 354
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+ I R W +IS YAQKG L E + LF M+ G +PD ++ S +S G
Sbjct: 355 LCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASG 414
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
G L+LG + D V N+LI+MYSKCG + A +F + K VV+W +
Sbjct: 415 NEGELQLGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNS 473
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDD 475
MI+G + NG +A+ LF + V F++V+QAC+H GFLEKG W I +
Sbjct: 474 MISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKW----IHHKL 529
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
+ + + D+ + G L+ A +M +S W +L+ + +H I
Sbjct: 530 ITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVS-WSSLISSYGVHGQI 585
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 209/432 (48%), Gaps = 25/432 (5%)
Query: 11 NRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL 70
N YRS++ W + I + L LF M++ ++EPN++T I ++C LS L
Sbjct: 260 NVTYRSTST--WTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLL 317
Query: 71 IYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ +H ++K+ + + D KI E+ R +A WN ++
Sbjct: 318 REGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISV 377
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+AQ G L+ + LF M+ G D ++ A+ + L L +H I D
Sbjct: 378 YAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPF-MD 436
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V N+ I+ Y+KC + +A ++F +E + VV+WNSM++G + +++ + M
Sbjct: 437 EYVFNSLINMYSKCGYVDLAYMIFDQMEPK--GVVTWNSMISGLSQNGYSTKAISLFDLM 494
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ VS++ + L +G+ +H I G + + L+ MY+KCGD+
Sbjct: 495 YVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDL 554
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+A+ +FD + +R+ VSW+++IS Y G + E + LF M +G P+ VTV++++S C
Sbjct: 555 QTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSAC 614
Query: 356 GQSGALELGKWFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
+G ++ G F N G+ K VC ++D+ S+ G + +A E+ +P S
Sbjct: 615 SHAGCVKEGMLFFNSMRDFGIEPKREHFVC--IVDLLSRAGDLDEAYEIIKLMPFPPGAS 672
Query: 414 -WTTMIAGCALN 424
W ++ GC ++
Sbjct: 673 IWGALLNGCRIH 684
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 12/317 (3%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS----- 211
L L +H+ I + D I SY++ DL+ + VF RT S
Sbjct: 14 LRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVF-------RTFHSPDSFM 66
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
W ++ + + ++++ Y M+ + + T S+L + L G+ VH I
Sbjct: 67 WGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRII 126
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
GFD+D V L+S+Y + G +DSAR +F + R VSW+++IS + G+++E L
Sbjct: 127 KSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLD 186
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
F M + G PD V VL+++ CG+ G L L K Y G++++ V ++LI MY+
Sbjct: 187 AFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYA 246
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCGS+ A +F + + +WT MI+ L G EAL LF + + ++ PN VT
Sbjct: 247 KCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRI 306
Query: 452 VLQACTHTGFLEKGWAI 468
+L++CT+ L +G ++
Sbjct: 307 ILRSCTNLSLLREGKSV 323
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 173/381 (45%), Gaps = 7/381 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L + +F D W +L G + + L++ M IQA+ T + +A
Sbjct: 49 LQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRA 108
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
L + + VH I G D D V +S Y + L A VF E LR +V
Sbjct: 109 CSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFG--EMPLRDLV 166
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHS 268
SW+S+++ + ++ L+ +R M+ G D V++++ + C E L + H
Sbjct: 167 SWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEA--CGELGVLRLAKSAHG 224
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ + G + D V ++LI MY+KCG + SA ++F+ + R+ +WTAMIS Y G L E
Sbjct: 225 YILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKE 284
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV-MVCNALI 387
AL LF +M+ P+ VT+ ++ C L GK L N+ + L+
Sbjct: 285 ALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLL 344
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
++Y+ ++ + + + + W T+I+ A G E +DLF ++ + P+
Sbjct: 345 ELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSF 404
Query: 448 TFLAVLQACTHTGFLEKGWAI 468
+ + L A + G L+ G I
Sbjct: 405 SLASSLSASGNEGELQLGLQI 425
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 183/611 (29%), Positives = 309/611 (50%), Gaps = 21/611 (3%)
Query: 34 EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------- 84
E ++ L FR M P+++ + +AC +L L ++ HG+I+K
Sbjct: 180 EINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDS 239
Query: 85 -----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
+ KC L A +F+ + R ++W AM+ + G+L+ L LF +M+ ++
Sbjct: 240 SLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEP 299
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN-TWISSYAKCDDLKMAELV 198
+ VT+ + ++ + L KSVH I +DA++ T + YA + E +
Sbjct: 300 NSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKI 359
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
I R + WN++++ ++++ + M GF D ++ S LS+
Sbjct: 360 LHEIGGR--GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEG 417
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L G +H H I F +D V N+LI+MYSKCG +D A ++FD + + V+W +MIS
Sbjct: 418 ELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMIS 476
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
G +Q G +A+ LF M V +S+I C G LE GKW + + G++
Sbjct: 477 GLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRK 536
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ + AL+DMY+KCG + A+ +F + E+ VVSW+++I+ ++G+ E + LF +++
Sbjct: 537 CIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKML 596
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
E ++PN VT + VL AC+H G +++G + D GI P+ +H+ C+ DLL R G
Sbjct: 597 ESGIKPNDVTVMNVLSACSHAGCVKEG-MLFFNSMRDFGI--EPKREHFVCIVDLLSRAG 653
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
L EA + ++ MP A IWG LL C+IH ++I + + L+ ++ Y ++N
Sbjct: 654 DLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSN 713
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDC 618
YA GG W+ +R+MMK +KK P S+ + K F A D + + + TY +
Sbjct: 714 IYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAGDASYPQLKYTYSTFNN 773
Query: 619 LALHSREEAYS 629
SREE S
Sbjct: 774 AQRSSREEVSS 784
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 248/537 (46%), Gaps = 24/537 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R + S W ++ V + + L+ QM I+ N+ TFP + +AC+ DL
Sbjct: 57 RTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLG 116
Query: 72 YSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
Q +HG I+KS F + LD A K+F EM +RD+ SW++++
Sbjct: 117 VGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVV 176
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVS 177
+ G + L F M G D V V+ + +A L L KS H + + G++ D
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
V ++ I YAKC L+ AE+VF + R+ +W +M++ G ++L + M
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVT--YRSTSTWTAMISSYNLGGYLKEALALFVSMQK 294
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDID 296
+ T+ +L S L +G+ VH I D ++ + TL+ +Y+ D
Sbjct: 295 TEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHD 354
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
+ I R W +IS YAQKG L E + LF M+ G +PD ++ S +S G
Sbjct: 355 LCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASG 414
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
G L+LG + D V N+LI+MYSKCG + A +F + K VV+W +
Sbjct: 415 NEGELQLGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNS 473
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDD 475
MI+G + NG +A+ LF + V F++V+QAC+H GFLEKG W I +
Sbjct: 474 MISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKW----IHHKL 529
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
+ + + D+ + G L+ A +M +S W +L+ + +H I
Sbjct: 530 ITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVS-WSSLISSYGVHGQI 585
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 209/432 (48%), Gaps = 25/432 (5%)
Query: 11 NRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL 70
N YRS++ W + I + L LF M++ ++EPN++T I ++C LS L
Sbjct: 260 NVTYRSTST--WTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLL 317
Query: 71 IYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ +H ++K+ + + D KI E+ R +A WN ++
Sbjct: 318 REGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISV 377
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+AQ G L+ + LF M+ G D ++ A+ + L L +H I D
Sbjct: 378 YAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPF-MD 436
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V N+ I+ Y+KC + +A ++F +E + VV+WNSM++G + +++ + M
Sbjct: 437 EYVFNSLINMYSKCGYVDLAYMIFDQMEPK--GVVTWNSMISGLSQNGYSTKAISLFDLM 494
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ VS++ + L +G+ +H I G + + L+ MY+KCGD+
Sbjct: 495 YVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDL 554
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+A+ +FD + +R+ VSW+++IS Y G + E + LF M +G P+ VTV++++S C
Sbjct: 555 QTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSAC 614
Query: 356 GQSGALELGKWFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
+G ++ G F N G+ K VC ++D+ S+ G + +A E+ +P S
Sbjct: 615 SHAGCVKEGMLFFNSMRDFGIEPKREHFVC--IVDLLSRAGDLDEAYEIIKLMPFPPGAS 672
Query: 414 -WTTMIAGCALN 424
W ++ GC ++
Sbjct: 673 IWGALLNGCRIH 684
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 12/317 (3%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS----- 211
L L +H+ I + D I SY++ DL+ + VF RT S
Sbjct: 14 LRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVF-------RTFHSPDSFM 66
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
W ++ + + ++++ Y M+ + + T S+L + L G+ VH I
Sbjct: 67 WGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRII 126
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
GFD+D V L+S+Y + G +DSAR +F + R VSW+++IS + G+++E L
Sbjct: 127 KSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLD 186
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
F M + G PD V VL+++ CG+ G L L K Y G++++ V ++LI MY+
Sbjct: 187 AFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYA 246
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCGS+ A +F + + +WT MI+ L G EAL LF + + ++ PN VT
Sbjct: 247 KCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRI 306
Query: 452 VLQACTHTGFLEKGWAI 468
+L++CT+ L +G ++
Sbjct: 307 ILRSCTNLSLLREGKSV 323
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 173/381 (45%), Gaps = 7/381 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L + +F D W +L G + + L++ M IQA+ T + +A
Sbjct: 49 LQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRA 108
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
L + + VH I G D D V +S Y + L A VF E LR +V
Sbjct: 109 CSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFG--EMPLRDLV 166
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHS 268
SW+S+++ + ++ L+ +R M+ G D V++++ + C E L + H
Sbjct: 167 SWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEA--CGELGVLRLAKSAHG 224
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ + G + D V ++LI MY+KCG + SA ++F+ + R+ +WTAMIS Y G L E
Sbjct: 225 YILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKE 284
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV-MVCNALI 387
AL LF +M+ P+ VT+ ++ C L GK L N+ + L+
Sbjct: 285 ALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLL 344
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
++Y+ ++ + + + + W T+I+ A G E +DLF ++ + P+
Sbjct: 345 ELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSF 404
Query: 448 TFLAVLQACTHTGFLEKGWAI 468
+ + L A + G L+ G I
Sbjct: 405 SLASSLSASGNEGELQLGLQI 425
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%)
Query: 254 FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
F L Q +H+H I D LI YS+ GD+ S+ +F W
Sbjct: 8 FKASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMW 67
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
++ + G EA+ L+ M + + T S++ C G L +G+
Sbjct: 68 GVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIK 127
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
G + +V AL+ +Y + G + AR++F +P + +VSW+++I+ NGE E LD
Sbjct: 128 SGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDA 187
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
F ++ P+ V L V++AC G L
Sbjct: 188 FRCMVSEGGTPDSVLVLTVVEACGELGVLR 217
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 176/583 (30%), Positives = 292/583 (50%), Gaps = 21/583 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I N + L L++QM + I+P+++TF AC KL D + IH IV
Sbjct: 215 WTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIV 271
Query: 82 KSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
S + +C + A + F+++ + V W +++ + Q L L
Sbjct: 272 SSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDL 331
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
+ M G+ AD VT + A L K++HS G + V V ++ YAK
Sbjct: 332 YGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLV-VHTALLTMYAK 390
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C +L A VF + ++ R V W +M++ ++L Y M+ G R + T
Sbjct: 391 CGELDAARAVFNRVRQK-RNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFS 449
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
++L++ L G +H H + +V+V N L++MY+KCG ++ A+ F+ +
Sbjct: 450 NVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRK 509
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
VSW AMI YAQ G EAL L+ M + G LPD VT+ S +S C SG+L+LG+
Sbjct: 510 DLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIH 569
Query: 369 NYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
+ + ++MV AL++MY +CG + AR +F + ++ V+SWT M + A G
Sbjct: 570 SRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHA 629
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+ LDL+ +++ +RPN +TF ++L C+H G L +G + + + P +H+
Sbjct: 630 DQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVV--PIREHF 687
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
CM DLLGR G+L++A V+SMP + D+ W T+L +CK H + + + A + +L+P
Sbjct: 688 LCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDP 747
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
+ + Y +++ + G ++ MK +KK PGQSL
Sbjct: 748 ENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLI 790
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 259/520 (49%), Gaps = 28/520 (5%)
Query: 24 SQIREAVNKNEA-HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
+Q+ A KN ++ L L+ +M + EP+ +T+ + +C+ + L ++ IH I++
Sbjct: 113 NQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIE 172
Query: 83 SP----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+P + KC ++ A K+FD + RD SW +M+ +A GF + L
Sbjct: 173 APQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEAL 232
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L+ M GIQ D +T T A + L K++H+ + +++D V + I+ Y
Sbjct: 233 DLYQQMDADGIQPDSIT---FTSALLACTKLVDGKAIHARIVSSNMESDF-VGSALINMY 288
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+C D+ A F I+ + VV W S++ + ++L+ Y M + G D T
Sbjct: 289 ARCGDVSSARQAFEKIQNK--HVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVT 346
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V+ L + AL +G+ +HS GF + V L++MY+KCG++D+AR +F+ +
Sbjct: 347 YVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVFNRVR 405
Query: 307 DRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ V WTAMIS YAQ G EAL L+ M A G P+ T ++++ C SG LE G
Sbjct: 406 QKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGM 465
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
+ + L NV V NAL+ MY+KCGS+ A+ F A K +VSW MI A +G
Sbjct: 466 KIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHG 525
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
EALDL+ + + P+ VT + L AC +G L+ G I ++ S+ L
Sbjct: 526 LGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQ--SFRSSLM 583
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + ++ GR G+L+ A + M + D W + A
Sbjct: 584 VQTALVNMYGRCGRLETARSMFEDMG-QRDVLSWTAMTSA 622
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 256/557 (45%), Gaps = 58/557 (10%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMA-VRDV 106
+ C +L L +++H H++++ + C + A F A ++ V
Sbjct: 50 QQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAV 109
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
A +N ML + + G L L++ M G + D +T + + L + +H+
Sbjct: 110 ACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHAS 169
Query: 167 GIHIG--VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
I + ++S+ N ++ Y KC ++ A VF GI+ R VSW SM++
Sbjct: 170 IIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKN--RDAVSWTSMISSYANNGF 227
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
D++L+ Y+ M +G + D T S L C + LV G+ +H+ + + D V +
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSAL--LACTK-LVDGKAIHARIVSSNMESDF-VGSA 283
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI+MY++CGD+ SAR F+ I ++ V WT++++ Y Q EAL L+ M+ G D
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHAD 343
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
VT ++ + C GAL+ GK + G + +++V AL+ MY+KCG + AR +F
Sbjct: 344 GVTYVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVFN 402
Query: 405 ALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ +K V WT MI+ A G EAL+L+ Q++ RPN TF VL AC+ +G LE
Sbjct: 403 RVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLE 462
Query: 464 KGWAIS------------------IIQYDDKG----------ISYNPELDHYSCMADLLG 495
G I + Y G S +L ++ M
Sbjct: 463 AGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYA 522
Query: 496 RKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
+ G +EALD Q+M + D + L AC I ++++G + + K + ++
Sbjct: 523 QHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSL 582
Query: 553 YVEMA--NKYALGGRWD 567
V+ A N Y GR +
Sbjct: 583 MVQTALVNMYGRCGRLE 599
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 149/365 (40%), Gaps = 29/365 (7%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
NR+ + + W + I + L L+ QM PN TF + AC+ D
Sbjct: 401 FNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGD 460
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L IHGH+ S + KC L+ A F+ +D+ SWNAM+
Sbjct: 461 LEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGA 520
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDA 174
+AQ G L L+ M G+ D VT+ A + L L + +HS + + +
Sbjct: 521 YAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRS 580
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
+ V ++ Y +C L+ A +F + + R V+SW +M + D L+ Y
Sbjct: 581 SLMVQTALVNMYGRCGRLETARSMFEDMGQ--RDVLSWTAMTSAYAQQGHADQVLDLYLE 638
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT----LISMYS 290
M+ +G R + T S+L C A + R V + + +V I ++ +
Sbjct: 639 MVLHGIRPNEITFTSILVG--CSHAGLLARGVECF-LEMQSEHEVVPIREHFLCMVDLLG 695
Query: 291 KCGDIDSARVLFDGICDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTV 348
+ G + A L + + + V+W ++ D D A R A EL P+ ++
Sbjct: 696 RSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKR---AARRVKELDPENTSL 752
Query: 349 LSMIS 353
S++S
Sbjct: 753 YSLLS 757
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-K 409
++ CG+ G+L GK + G N + N LI MY CG I AR F K
Sbjct: 48 LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI- 468
V + M++ NG + AL+L+H++ E P+++T+ VL +C+ G L + I
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167
Query: 469 -SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
SII+ + I N L + + ++ G+ G ++EA + + DA W +++
Sbjct: 168 ASIIEA-PQIIRDNLSLQN--ALVNMYGKCGSVEEARKVFDGIKNR-DAVSWTSMI 219
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 287/582 (49%), Gaps = 19/582 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
NS I ++ ++ L L Q++Q+ P + +CAK + +H I+K
Sbjct: 48 NSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIK 107
Query: 83 SPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
F KC + A ++FDEM R+V +WN+++ G+ +G E + L
Sbjct: 108 VGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIEL 167
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M VGI +V + + L VH + G ++ V I Y+K
Sbjct: 168 FLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSK 227
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
++ + L+F + ER +++W SMVAG + + ++ R M G RL+ T
Sbjct: 228 GWNIDASRLMFDLMPER--NIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYN 285
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARVLFDGIC 306
LLSSF L + VH I G + + + TL+++YS+C ++ + G+
Sbjct: 286 CLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVT 345
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++SW A+I G + G+ + AL+ F M AG DL T S++ G L+ GK
Sbjct: 346 RWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQ 405
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G N+ V N L+ MY++CGSI DA+ +F + V+SW ++++GCA +G
Sbjct: 406 IHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGY 465
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EA++LF Q+ ++P+ TFL VL AC H G L+KG + +D + +P +H
Sbjct: 466 GREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLE-SPTTEH 524
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YS M DL R G L EA DF+ +MPI+ ++ LL AC++H N+EI A L ++
Sbjct: 525 YSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMC 584
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
P+ YV ++N A G WD VA+IR +M V+K PG S
Sbjct: 585 PNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYS 626
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 227/484 (46%), Gaps = 31/484 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ + LF +M + I+P + + C ++ D +HG +
Sbjct: 148 WNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSM 207
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F K +D + +FD M R++ +W +M+ G+A +
Sbjct: 208 KCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMV 267
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L +M+ +GI+ ++VT L + + L K VH I G++++ + T ++ Y+
Sbjct: 268 LVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYS 327
Query: 188 KCDDLKMAEL--VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
+C + + V G+ + +SWN+++ G + + +L + M G +D+
Sbjct: 328 ECSSSSLEDFNKVCSGVTRWDQ--ISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLF 385
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L + L +G+ +H+ + G+ +++V N L+SMY++CG I+ A+ +F +
Sbjct: 386 TFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLM 445
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG- 364
+SW +++SG A G EA+ LF M +G PD T L ++S C G L+ G
Sbjct: 446 DRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGL 505
Query: 365 KWFD----NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
++FD +Y+ ++ ++++D++S+ G + +A + +P E + +++
Sbjct: 506 EYFDLMRNDYSLESPTTEHY---SSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLS 562
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT-GFLEKGWAISIIQYDDKGI 478
C ++G A+ +L+++ PN +L T G+ + +I + D+G+
Sbjct: 563 ACQVHGNVEIAVRCAKKLLQMC--PNDPVIYVLLSNVQATVGYWDNVASIRKVMC-DRGV 619
Query: 479 SYNP 482
P
Sbjct: 620 RKEP 623
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 301/588 (51%), Gaps = 28/588 (4%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSPFV---------------KCDRLDCAYKIFDEMAVRDV 106
+ CA+ D + Q IHG +V+ F+ KC + A +F + RDV
Sbjct: 67 QRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFGG-SERDV 125
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+NA++ GF G + + ++ MR GI D T L + + A +S +K VH+
Sbjct: 126 FGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGS-DAMEVSDVKKVHAL 184
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+G +D V + ++SY+K ++ A+ VF + +R +V+ WN++V G ++ +F+
Sbjct: 185 AFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVL-WNALVNGYSHIFRFE 243
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
D+L + M G + T+ S+LSSF L GR +H + GFD + V N LI
Sbjct: 244 DALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALI 303
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
+Y K ++ A +F+ + +R +W +++ + GD D L LF M +G PD+V
Sbjct: 304 DLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIV 363
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGL----KDNVMVCNALIDMYSKCGSIGDAREL 402
T+ +++ CG+ +L+ G+ Y + GL N + N+L+DMY KCG + DAR +
Sbjct: 364 TLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMV 423
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F ++ K SW MI G + ALD+F + ++P+ +TF+ +LQAC+H+GF+
Sbjct: 424 FDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFV 483
Query: 463 EKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+G + Q + YN P DHY+C+ D+LGR KL+EA D SMPI + +W
Sbjct: 484 NEGRNF-LAQME---TLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVWR 539
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
++L +C++H N ++ L++LEP YV M+N Y +++ V ++R MK
Sbjct: 540 SILSSCRLHGNKDLAVVAGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQN 599
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
VKK PG S + TF D+ H E E + L L H Y
Sbjct: 600 VKKTPGCSWIGLQNGVHTFFTGDQTHPEFESIHGWLSLLISHMHGHEY 647
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 214/454 (47%), Gaps = 50/454 (11%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA--CAKLSDL--------- 70
+N+ I V + ++R+M+ I P+ TFP + K ++SD+
Sbjct: 128 YNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAMEVSDVKKVHALAFK 187
Query: 71 --IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVAS-WNAMLVGFAQMGFLENVLR 127
S G + + + K ++ A K+FDE+ RD + WNA++ G++ + E+ L
Sbjct: 188 LGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALI 247
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F MR G+ T+ + + + L +S+H + +G D+ + V N I Y
Sbjct: 248 VFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYG 307
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K L+ A +F ++E R + +WNS++ Y D +L + M+ +G R D+ T+
Sbjct: 308 KSKWLEEANSIFEAMDE--RDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTL 365
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS----VINTLISMYSKCGDIDSARVLFD 303
++L + +L QGR +H + I G S + N+L+ MY KCGD+ AR++FD
Sbjct: 366 TTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFD 425
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ + SW MI+GY + + AL +F M AG PD +T + ++ C SG +
Sbjct: 426 SMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNE 485
Query: 364 GKWF--------------DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-- 407
G+ F D+YAC +IDM + + +A +L ++P
Sbjct: 486 GRNFLAQMETLYNILPTSDHYAC-------------VIDMLGRADKLEEAYDLAISMPIC 532
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ VV W ++++ C L+G A+ +L EL+
Sbjct: 533 DNPVV-WRSILSSCRLHGNKDLAVVAGKRLYELE 565
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 280/563 (49%), Gaps = 32/563 (5%)
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHA 154
++F M RD S+NA++ GF+ G ++L+ +R ++ +T+ + A
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL-------- 206
+L SVH + +G A V + + YAK ++ A VF +E +
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 207 ---------------------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
R ++W +MV G T ++L+ +R M G +D
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L++ A +G+ +H++ ++ +V V + L+ MYSKC I A +F +
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R +SWTAMI GY Q +EA+R F M+ G PD T+ S+IS C +LE G
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
F A GL + V NAL+ +Y KCGSI DA LF + VSWT ++ G A G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ E +DLF +++ L+P+ VTF+ VL AC+ G +EKG D I P D
Sbjct: 460 KAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIV--PIDD 517
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+CM DL R G+ KEA +F++ MP DA W TLL +C++ N+EIG++ A L +
Sbjct: 518 HYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLET 577
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + A YV + + +A G+W VA++R M+ QVKK PG S K F+A+D+
Sbjct: 578 DPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQS 637
Query: 606 HAESELTYPVLDCLALHSREEAY 628
H S Y L+ L EE Y
Sbjct: 638 HPFSSRIYEKLEWLNSKMAEEGY 660
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 209/481 (43%), Gaps = 63/481 (13%)
Query: 1 MAVSSLPPRLNRIYRSSTIN---QWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLT 56
+A S L P + R++ S +N+ I + +++ L+R + ++ + P +T
Sbjct: 89 LAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRIT 148
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVK----------SPFV-------------------- 86
+ + LSD +H +++ SP V
Sbjct: 149 LSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEME 208
Query: 87 ---------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
+C ++ A +F M RD +W M+ G Q G L +F
Sbjct: 209 AKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRR 268
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
MR G+ D T + A K +H++ + +V V + + Y+KC
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS 328
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+++AE VF + R ++SW +M+ G ++++ + M +G + D T+ S++
Sbjct: 329 IRLAEAVFRRMT--CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVI 386
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
SS +L +G H + G ++V N L+++Y KCG I+ A LFD + +V
Sbjct: 387 SSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 446
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNY 370
SWTA+++GYAQ G E + LF M G PD VT + ++S C ++G +E G +FD+
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSM 506
Query: 371 ACSGGLKDNVMVC-----NALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALN 424
KD+ +V +ID+YS+ G +A E +P W T+++ C L
Sbjct: 507 Q-----KDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLR 561
Query: 425 G 425
G
Sbjct: 562 G 562
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 40/328 (12%)
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D ++ N +S+ A + E +F + ER VS+N+++ G + S+ Y
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPER--DAVSYNALITGFSSTGSPARSVQLY 133
Query: 233 RHMM----YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
R ++ R+ ++ ++ +++S + AL G VH + GF V + L+ M
Sbjct: 134 RALLREESVRPTRITLSAMI-MVASALSDRAL--GHSVHCQVLRLGFGAYAFVGSPLVDM 190
Query: 289 YSK-------------------------------CGDIDSARVLFDGICDRTRVSWTAMI 317
Y+K C I+ A+ LF + DR ++WT M+
Sbjct: 191 YAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMV 250
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+G Q G EAL +F M A G D T S+++ CG A E GK Y +
Sbjct: 251 TGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYE 310
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
DNV V +AL+DMYSKC SI A +F + + ++SWT MI G N EA+ F ++
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG 465
++P+ T +V+ +C + LE+G
Sbjct: 371 QMDGIKPDDFTLGSVISSCANLASLEEG 398
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 150/360 (41%), Gaps = 51/360 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + L +FR+M+ + + TF I AC L+ + IH +I
Sbjct: 246 WTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYIT 305
Query: 82 KS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A +F M R++ SW AM+VG+ Q E +R
Sbjct: 306 RTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M++ GI+ D T+ + + + L H + G+ ++V N ++ Y
Sbjct: 366 AFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYG 425
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F E VSW ++V G K ++++ + M+ NG + D T
Sbjct: 426 KCGSIEDAHRLF--DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTF 483
Query: 248 VSLLSSFVCPEA-LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ +LS+ C A LV+ G Y FD SM K DI V D
Sbjct: 484 IGVLSA--CSRAGLVE------KGCDY-FD----------SM-QKDHDI----VPIDD-- 517
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+T MI Y++ G EA M + PD +++S C G +E+GKW
Sbjct: 518 -----HYTCMIDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGKW 569
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 36/249 (14%)
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D ++ N L+S + + LF + +R VS+ A+I+G++ G +++L+ A
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135
Query: 336 M-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
+ P +T+ +MI LG G V + L+DMY+K G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195
Query: 395 SIGDARELFYALPEKIVV-------------------------------SWTTMIAGCAL 423
I DAR +F + K VV +WTTM+ G
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA----ISIIQYDDKGIS 479
NG +EALD+F ++ + ++ TF ++L AC E+G I+ Y+D
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFV 315
Query: 480 YNPELDHYS 488
+ +D YS
Sbjct: 316 GSALVDMYS 324
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 287/578 (49%), Gaps = 23/578 (3%)
Query: 76 IHGHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H H++++ + K + A +F+ M +D SWN+++ G Q
Sbjct: 408 VHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNE 467
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
E+ F+ MR G T++ + + L + +H G+ +G+D DVSV N
Sbjct: 468 CSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSN 527
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD-KFDDSLNFYRHMMYNG 239
++ YA+ VF + E + VSWNS++ + + ++ ++ MM G
Sbjct: 528 ALLALYAETGCFTECLKVFSLMPEYDQ--VSWNSVIGALSDSEASVSQAVKYFLQMMRGG 585
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ L T +++LS+ +H+ + Y D ++ N L+S Y KCG+++
Sbjct: 586 WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECE 645
Query: 300 VLFDGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F + + R VSW +MISGY L +A+ L + M G+ D T +++S C
Sbjct: 646 KIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASV 705
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
LE G L+ +V+V +AL+DMYSKCG I A F +P + V SW +MI
Sbjct: 706 ATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMI 765
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+G A +G +AL LF ++M P+ VTF+ VL AC+H GF+E+G+ + +
Sbjct: 766 SGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGF--EHFKSMSEVY 823
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC--KIHLNIEIGE 536
+P ++H+SCM DLLGR GKL E DF+ SMP+K + IW T+L AC N E+G
Sbjct: 824 RLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGR 883
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A L +LEP +A YV +AN YA G +W+ VA RT MK VKK G S +
Sbjct: 884 RAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGV 943
Query: 597 CTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
F A D+ H E +L Y L L R+ Y K+
Sbjct: 944 HVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKY 981
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 208/449 (46%), Gaps = 23/449 (5%)
Query: 22 WNSQIREAVNKNE-AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I +++NE + F +M++ P+N T +CA L ++ + IH
Sbjct: 456 WNSLI-SGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDG 514
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM-GFLENV 125
+K + + + K+F M D SWN+++ + +
Sbjct: 515 LKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQA 574
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
++ F M G VT + + A + +H+ + + D ++ N +S
Sbjct: 575 VKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSC 634
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC ++ E +F + E R VSWNSM++G + + +++ MM G RLD
Sbjct: 635 YGKCGEMNECEKIFARMSE-TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSF 693
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T ++LS+ L +G VH+ GI + DV V + L+ MYSKCG ID A F+ +
Sbjct: 694 TFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM 753
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG- 364
R SW +MISGYA+ G ++AL+LF M G+ PD VT + ++S C G +E G
Sbjct: 754 PLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGF 813
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMI-AGCA 422
+ F + + L V + ++D+ + G + + + ++P K V+ W T++ A C
Sbjct: 814 EHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCR 873
Query: 423 LNGEFVEALDLFHQLMELDLRP-NRVTFL 450
NG E L M L+L P N V ++
Sbjct: 874 ANGRNTE-LGRRAAEMLLELEPQNAVNYV 901
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 232/516 (44%), Gaps = 45/516 (8%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAK--LSDLIYSQMIHGHIVKSPF----VKCDRLDCAY 95
FR M + PN+ F +AC + S IHG I K+ + V C+ L Y
Sbjct: 160 FRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMY 219
Query: 96 -----------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF--- 141
+FD + +R+ SWN+++ +++ G + LF +M+ G+ F
Sbjct: 220 GSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPN 279
Query: 142 -VTVMGLTQAAIHAKHLSL--LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
T L A + L L+ + + G D+ V + +S +A+ A+ +
Sbjct: 280 EYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNI 339
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF---- 254
F + +R VVS N ++ G + + + + H M + ++ + V LLS+F
Sbjct: 340 F--EQMGVRNVVSMNGLMVGLVKQKQGEAAAKVF-HEMKDLVGINSDSYVVLLSAFSEFS 396
Query: 255 VCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
V E +GR VH+H I G D V++ N L++MY+K G I A +F+ + ++ VSW
Sbjct: 397 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 456
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
++ISG Q ++A F M G +P T++S +S C G + LG+
Sbjct: 457 NSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK 516
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-EALD 432
GL +V V NAL+ +Y++ G + ++F +PE VSW ++I + + V +A+
Sbjct: 517 LGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 576
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQY---DDKGISYNPELDHY 487
F Q+M +RVTF+ +L A + E I +++Y DD I N L Y
Sbjct: 577 YFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG-NALLSCY 635
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G+ G++ E M D W +++
Sbjct: 636 -------GKCGEMNECEKIFARMSETRDEVSWNSMI 664
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 135/566 (23%), Positives = 241/566 (42%), Gaps = 69/566 (12%)
Query: 2 AVSSLPPRLNRIYRSSTINQWNSQIREAVN---KNEAHKTLLLFRQMKQNDIEPNNLTFP 58
S PP + +++ NQ +++ V+ + +H LF + + +L
Sbjct: 25 TASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFE----SLINR 80
Query: 59 FIAKACAKLSDLIYSQMIHGHIVKSPF---------VKCDRLDCAYKIFDEMAVRDVASW 109
+ C++ + ++ Q I V + F V+ L A K+FDEM+ R++ +W
Sbjct: 81 YQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTW 140
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS------LLKSV 163
++ G+ Q G + F +M ++A F+ +A+ A S L +
Sbjct: 141 ACLISGYTQNGKPDEACARFRDM----VRAGFIPNHYAFGSALRACQESGPSGCKLGVQI 196
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKC-DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
H +DV VCN IS Y C D A VF GI +R +SWNS+++ Y
Sbjct: 197 HGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIG--IRNSISWNSIIS--VYS 252
Query: 223 DKFD--DSLNFYRHMMYNGFRLD-----------VTTVVSLLSSFVCPEALVQGRLVHSH 269
+ D + + + M G +TT S + +C + R+ S
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKS- 311
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
GF D+ V + L+S +++ G D A+ +F+ + R VS ++ G ++ + A
Sbjct: 312 ----GFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAA 367
Query: 330 LRLFFAMEAAGELPDLVTVLS-----MISGCGQSGALE----LGKWFDNYACSGGLKDN- 379
++F E+ DLV + S ++S + LE G+ + GL DN
Sbjct: 368 AKVFH------EMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNK 421
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V + N L++MY+K G+I DA +F + EK VSW ++I+G N +A + FH++
Sbjct: 422 VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRR 481
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
P+ T ++ L +C G++ G I D + + ++ + + L G
Sbjct: 482 TGSMPSNFTLISTLSSCASLGWIMLG---EQIHCDGLKLGLDTDVSVSNALLALYAETGC 538
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCA 525
E L MP + D W +++ A
Sbjct: 539 FTECLKVFSLMP-EYDQVSWNSVIGA 563
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 187/640 (29%), Positives = 304/640 (47%), Gaps = 29/640 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
RI + WN+ + + ++ K + F M I+PN ++F I AC+
Sbjct: 393 FRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEA 452
Query: 70 LIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAV--RDVASWNAM 112
L + + IH I+ S + KC + A +F EM + R + +WN M
Sbjct: 453 LDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVM 512
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
L +AQ + M G+ D ++ + + ++ +L+ + I
Sbjct: 513 LGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLR------MCILE 566
Query: 173 DADVSVC--NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
S C IS + +C +L+ A VF ++ VVSW +MV+ F + N
Sbjct: 567 SGYRSACLETALISMHGRCRELEQARSVFNEMDHG--DVVSWTAMVSATAENRDFKEVHN 624
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+R M G D T+ + L + + L G+++H+ G + D++V N L++MYS
Sbjct: 625 LFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYS 684
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
CGD A F+ + R VSW M + YAQ G EA+ LF M+ G PD +T +
Sbjct: 685 NCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFST 744
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++ G S + GK F A GL +V V L+ +Y+KCG + +A LF +
Sbjct: 745 TLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWT 804
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
VV +I A +G EA+ +F ++ + +RP+ T ++++ AC H G +E+G + +
Sbjct: 805 VVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFL 864
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
+ GIS P L+HY+C DLLGR G+L+ A ++ MP + + +W +LL CK+
Sbjct: 865 TMKEYFGIS--PTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
+ E+GE A + +L+PH++A +V ++N Y G+W R M VK PG S F
Sbjct: 923 DAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWF 982
Query: 591 HINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
I + F A DR H +++ Y VLD L L R Y +
Sbjct: 983 EIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEA 1022
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 229/504 (45%), Gaps = 24/504 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS-DLIYSQMIHGHI 80
WN+ I +V + +FR+++ + PN++T I A A D ++ HG I
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRI 361
Query: 81 --------------VKSPFVKCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQMGFLENV 125
+ S + KC A+ +F + + DV SWN ML V
Sbjct: 362 WESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKV 421
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 184
+ F++M L GI + V+ + + A +++ L + +HS + D + SV +S
Sbjct: 422 VNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVS 481
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC + AELVF + R++V+WN M+ D+ ++ M+ G D
Sbjct: 482 MYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ S+LSS C + + +++ + G+ + LISM+ +C +++ AR +F+
Sbjct: 542 LSFTSVLSSCYCSQ---EAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFNE 597
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ VSWTAM+S A+ D E LF M+ G +PD T+ + + C S L LG
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLG 657
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K GL+ ++ V NAL++MYS CG +A F + + +VSW M A A
Sbjct: 658 KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQA 717
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EA+ LF Q+ ++P+++TF L + + G + + + ++
Sbjct: 718 GLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAES---GLDSDV 774
Query: 485 DHYSCMADLLGRKGKLKEALDFVQ 508
+ + L + GKL EA+ +
Sbjct: 775 SVATGLVKLYAKCGKLDEAMSLFR 798
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 241/503 (47%), Gaps = 31/503 (6%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKI 97
T LL + ND+ IA A + + G+ + + +V+C L+ A+ I
Sbjct: 29 TALLQSCVDSNDLAKGKHAHELIANAG------LEQHLFLGNCLINMYVRCGSLEEAHAI 82
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA-DFVTVMGLTQAAIHAKH 156
F +M R+V SW A++ AQ G LF M L A + T++ + A +++
Sbjct: 83 FSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142
Query: 157 LSLLKSVHSFGIHIGVDADVS----VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L++ +S+H+ +G++ + V N I+ YAKC L+ A VF I E + VVSW
Sbjct: 143 LAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPE--KDVVSW 200
Query: 213 NSMVAGCTYGDKF-DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS--H 269
+M +F D+L +R M+ +V T ++ L + +L G +HS H
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLH 257
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR---VSWTAMISGYAQKGDL 326
GFD S N LI+MY KCGD + A +F + R VSW AMIS + G
Sbjct: 258 EASLGFDPLAS--NALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRH 315
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNA 385
+A+ +F + G P+ VT++++++ SG + F G +V++ NA
Sbjct: 316 GDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNA 375
Query: 386 LIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+I MY+KCG A +F + K V+SW TM+ F + ++ FH ++ + P
Sbjct: 376 IISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDP 435
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
N+V+F+A+L AC+++ L+ G I S+I + E + + + G+ G + EA
Sbjct: 436 NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY---VESSVATMLVSMYGKCGSISEA 492
Query: 504 LDFVQSMPIKSDAGI-WGTLLCA 525
+ MP+ S + + W +L A
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGA 515
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 159/331 (48%), Gaps = 14/331 (4%)
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
AD L Q+ + + L+ K H + G++ + + N I+ Y +C L+ A +
Sbjct: 23 ADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCP 257
F +EE R VVSW ++++ F + +R M+ + T+V++L++
Sbjct: 83 FSKMEE--RNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANS 140
Query: 258 EALVQGRLVHSH----GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
L GR +H+ G+ V N +I+MY+KCG ++ A +F I ++ VSW
Sbjct: 141 RDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSW 200
Query: 314 TAMISGYAQKGDL-DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
TAM YAQ+ +ALR+F M P+++T ++ + C +L G W +
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLH 257
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI---VVSWTTMIAGCALNGEFVE 429
L + + NALI+MY KCG A +F A+ + +VSW MI+ G +
Sbjct: 258 EASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGD 317
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
A+ +F +L +RPN VT + +L A +G
Sbjct: 318 AMAIFRRLRLEGMRPNSVTLITILNALAASG 348
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 14/291 (4%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D+ +LL S V L +G+ H + G + + + N LI+MY +CG ++ A +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGAL 361
+ +R VSWTA+IS AQ G A LF M + P+ T+++M++ C S L
Sbjct: 84 SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 362 ELGKWFDNYACSGGLK----DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+G+ GL+ +V NA+I+MY+KCGS+ DA +F A+PEK VVSWT M
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAM 203
Query: 418 IAGCALNGEFV-EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
A F +AL +F +++ L PN +TF+ L AC T + W S++ +
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--TSLRDGTWLHSLLH--EA 259
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI--WGTLLCA 525
+ ++P + + ++ G+ G + A ++M + + + W ++ A
Sbjct: 260 SLGFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISA 308
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 195/633 (30%), Positives = 304/633 (48%), Gaps = 19/633 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + + L L+ +M + P+ TFP + ++C + D + +H H+
Sbjct: 156 SWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHV 215
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
++ F KC + A K+FD M V D SWNAM+ G + G L
Sbjct: 216 LRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGL 275
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M +Q + +T+ +T A+ ++ K +H + G DV+ CN+ I Y
Sbjct: 276 ELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMY 335
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A ++ A VF ++ R ++W +M++G D +L Y M N D T
Sbjct: 336 ASLGMMRQARTVFSRMDTR--DAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDIT 393
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S L++ C +L G +H GF + V N ++ MY+K ID A +F +
Sbjct: 394 IASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMH 453
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
++ VSW++MI+G+ EAL F M A + P+ VT ++ ++ C +GAL GK
Sbjct: 454 EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVK-PNSVTFIAALAACAATGALRSGKE 512
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G++ + NALID+Y KCG G A F A K VVSW MIAG +G
Sbjct: 513 IHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGH 572
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
AL F+Q++++ P+ VTF+A+L AC+ G + +GW + + S P L H
Sbjct: 573 GDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGW--ELFHSMTEKYSIVPNLKH 630
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM DLL R G+L EA +F+ MPI DA +WG LL C+IH ++E+GE A + LE
Sbjct: 631 YACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALE 690
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+ A +V + + YA WD +A +R M+ + G S + G F +D H
Sbjct: 691 PNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESH 750
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
+ VL+ + + Y+ PE E
Sbjct: 751 PQIREINTVLEGIYERMKASGYAPVESHCPEDE 783
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 205/390 (52%), Gaps = 4/390 (1%)
Query: 62 KACAKLSDL-IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+ACA D + + G+ + S V+ A+++F +M RDV SWN M+ G+ + G
Sbjct: 109 RACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSG 168
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L+ L L++ M G++ D T + ++ + + VH+ + G +V V N
Sbjct: 169 LLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLN 228
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ YAKC D+ A VF + + +SWN+M+AG + + L + M+++
Sbjct: 229 ALMTMYAKCGDVMAARKVFDSMT--VMDCISWNAMIAGHFENGECNAGLELFLTMLHDEV 286
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ ++ T+ S+ + + + +H + GF DV+ N+LI MY+ G + AR
Sbjct: 287 QPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQART 346
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F + R ++WTAMISGY + G D+AL ++ ME PD +T+ S ++ C G+
Sbjct: 347 VFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGS 406
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L++G A S G ++V NA+++MY+K I A E+F + EK VVSW++MIAG
Sbjct: 407 LDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAG 466
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFL 450
N EAL F ++ D++PN VTF+
Sbjct: 467 FCFNHRNFEALYYFRHMLA-DVKPNSVTFI 495
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 192/386 (49%), Gaps = 17/386 (4%)
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
FG+ +G N +S + + A VF + ER V SWN MV G
Sbjct: 121 FGLRLG--------NAMLSMLVRFGETWHAWRVFAKMPER--DVFSWNVMVGGYGKSGLL 170
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D++L+ Y MM+ G R DV T +L S GR VH+H + +GF +V V+N L
Sbjct: 171 DEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNAL 230
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
++MY+KCGD+ +AR +FD + +SW AMI+G+ + G+ + L LF M P+L
Sbjct: 231 MTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNL 290
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T+ S+ G + K A G +V CN+LI MY+ G + AR +F
Sbjct: 291 MTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSR 350
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLEK 464
+ + ++WT MI+G NG +AL+++ LME+ ++ P+ +T + L AC G L+
Sbjct: 351 MDTRDAMTWTAMISGYEKNGFPDKALEVY-ALMEVNNVSPDDITIASALAACACLGSLDV 409
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G + + ISY + + + ++ + ++ +A++ + M K D W +++
Sbjct: 410 GVKLHELAESKGFISY---IVVTNAILEMYAKSKRIDKAIEVFKCMHEK-DVVSWSSMIA 465
Query: 525 A-CKIHLNIEIGEYVAYCLFKLEPHS 549
C H N E Y + L ++P+S
Sbjct: 466 GFCFNHRNFEALYYFRHMLADVKPNS 491
>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 189/589 (32%), Positives = 293/589 (49%), Gaps = 30/589 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ--NDIE-PNNLTFPFIAKACAKLSDLIYSQMIHG 78
W + I V E+ L +M +D++ PN T +AC+ L L + +HG
Sbjct: 195 WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 254
Query: 79 HIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
VK S FV+ AY F E+ D+ SW +++ A+ G +E
Sbjct: 255 FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE 314
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+F+ M+ G+ D V + L + K+ H F I D +VCN+ +S
Sbjct: 315 SFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLS 374
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y K + L +AE +FC I E +WN+M+ G + +R + G +D
Sbjct: 375 MYCKFELLSVAEKLFCRISEE-GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDS 433
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ S++SS A++ G+ +H + + DL +SV+N+LI +Y K GD+ A +F
Sbjct: 434 ASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-- 491
Query: 305 IC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
C D ++W AMI+ Y ++A+ LF M + P +T+++++ C +G+LE
Sbjct: 492 -CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLE 550
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ Y + N+ + ALIDMY+KCG + +RELF A +K V W MI+G
Sbjct: 551 RGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYG 610
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA--ISIIQYDDKGISY 480
++G+ A+ LF Q+ E D++P TFLA+L ACTH G +E+G + + QYD K
Sbjct: 611 MHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVK---- 666
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P L HYSC+ DLL R G L+EA V SMP D IWGTLL +C H E+G +A
Sbjct: 667 -PNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAE 725
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
+P + Y+ +AN Y+ G+W+ R MM+ + V K G S+
Sbjct: 726 RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSV 774
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 242/548 (44%), Gaps = 26/548 (4%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L R+ + I WNS I+ + + ++L F M + P++ T P + AC
Sbjct: 76 NLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSAC 135
Query: 65 AKLSDLIYSQMIHGHIVK-----------SPFV----KCDRLDCAYKIFDEMAVRDVASW 109
A+L +HG ++K + FV KC L A +FDEM RDV +W
Sbjct: 136 AELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAW 195
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT---QAAIHAKHLSLLKSVHSF 166
A++ G Q G E L M G D L QA + L + +H F
Sbjct: 196 TAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGF 255
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ G+ + V ++ S Y+K + A L F + + + SW S++A +
Sbjct: 256 AVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD--EDMFSWTSIIASLARSGDME 313
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+S + + M G D + L++ + QG+ H I + F LD +V N+L+
Sbjct: 314 ESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLL 373
Query: 287 SMYSKCGDIDSARVLFDGICDR-TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
SMY K + A LF I + + +W M+ GY + + + LF ++ G D
Sbjct: 374 SMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDS 433
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+ S+IS C GA+ LGK Y L + V N+LID+Y K G + A +F
Sbjct: 434 ASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE 493
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ V++W MIA + +A+ LF +++ + +P+ +T + +L AC +TG LE+G
Sbjct: 494 -ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG 552
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+I + L + + D+ + G L+++ + + K DA W ++
Sbjct: 553 ---QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK-DAVCWNVMISG 608
Query: 526 CKIHLNIE 533
+H ++E
Sbjct: 609 YGMHGDVE 616
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 194/420 (46%), Gaps = 11/420 (2%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + + + + ++F + RD+ WN+++ G L F++M L G D
Sbjct: 67 SSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHF 126
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T + A + VH + H G D + +V +++ Y+KC L+ A LVF
Sbjct: 127 TAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDE 186
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF-VCPE-- 258
+ + R VV+W ++++G + + L + M G +D +L F C
Sbjct: 187 MPD--RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLG 244
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL +GR +H + G V +++ S YSK G+ A + F + D SWT++I+
Sbjct: 245 ALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIA 304
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
A+ GD++E+ +F+ M+ G PD V + +I+ G+ + GK F +
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL 364
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEK-IVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ VCN+L+ MY K + A +LF + E+ +W TM+ G V+ ++LF ++
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 438 MELDLRPNRVTFLAVLQACTHTG--FLEKGWAISIIQYD-DKGIS-YNPELDHYSCMADL 493
L + + + +V+ +C+H G L K +++ D IS N +D Y M DL
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 10/297 (3%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L+ ++ I G+ ++ V + ISSYA ++ VF + R + WNS++
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR--DIFLWNSII 97
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI---HY 273
+ SL F+ M+ +G D T ++S+ C E L HG+ H
Sbjct: 98 KAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSA--CAELLWFHVGTFVHGLVLKHG 155
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GFD + +V + + YSKCG + A ++FD + DR V+WTA+ISG+ Q G+ + L
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 334 FAMEAAG---ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
M +AG + P+ T+ C GAL+ G+ +A GL + V +++ Y
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
SK G+ +A F L ++ + SWT++IA A +G+ E+ D+F ++ + P+ V
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 95/244 (38%), Gaps = 22/244 (9%)
Query: 343 PDLVTVLSMISG--------------CGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
P+LV L +S C QS +LE + + +GGL +N+ V + LI
Sbjct: 8 PNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLIS 67
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
Y+ G + +F+ + + + W ++I NG++ +L F ++ P+ T
Sbjct: 68 SYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFT 127
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
V+ AC + G + + G N + + + G L++A
Sbjct: 128 APMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVG--ASFVYFYSKCGFLQDACLVFD 185
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
MP + D W ++ +++ GE + + HSA V+ N L +
Sbjct: 186 EMPDR-DVVAWTAIISG-----HVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239
Query: 569 VANI 572
+N+
Sbjct: 240 CSNL 243
>gi|218546775|sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
Length = 736
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 314/614 (51%), Gaps = 36/614 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + ++ + L F +++ EPN T + AC L + IHG++
Sbjct: 115 SWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYV 172
Query: 81 VKSPFVKCDRLD----CAY---------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++S F + C Y K+FDEM+ RDV SW+ ++ + Q L+
Sbjct: 173 IRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLK 232
Query: 128 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISS 185
LF M + D VTV + +A + + + +SVH F I G D ADV VCN+ I
Sbjct: 233 LFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDM 292
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y+K D+ A VF E R +VSWNS++AG + ++D++L + M+ +D
Sbjct: 293 YSKGFDVDSAFRVF--DETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEV 350
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
TVVSLL E + + +H I G++ + +++LI Y+ C +D A + D +
Sbjct: 351 TVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM 410
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ VS + MISG A G DEA+ +F M + P+ +TV+S+++ C S L K
Sbjct: 411 TYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSK 467
Query: 366 WFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
W A L N + V +++D Y+KCG+I AR F + EK ++SWT +I+ A+N
Sbjct: 468 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 527
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNP 482
G +AL LF ++ + PN VT+LA L AC H G ++KG I S+++ D K P
Sbjct: 528 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK-----P 582
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHLN--IEIGEYV 538
L HYSC+ D+L R G++ A++ ++++P +K+ A WG +L C+ I E V
Sbjct: 583 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVV 642
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +LEP ++ Y+ ++ +A W+ VA +R ++K +V+ G S+
Sbjct: 643 AEVL-ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKR 701
Query: 599 FTAEDRY-HAESEL 611
F A D+ ++SEL
Sbjct: 702 FLAGDKLSQSDSEL 715
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 222/471 (47%), Gaps = 30/471 (6%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNN-LTFPFIAKACAKLSDLIYSQM 75
S + +S+I++A + + + + ++++ ++ N+ FP + KACAKLS L +
Sbjct: 9 SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRC 68
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
I ++K F +KC L + FD M RD SWN ++ G GF
Sbjct: 69 IQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGF 128
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVC 179
E L F +R+ G + + T++ IHA + +H + I G SV
Sbjct: 129 EEEGLWWFSKLRVWGFEPNTSTLV----LVIHACRSLWFDGEKIHGYVIRSGFCGISSVQ 184
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ + YA D L +L F + E R V+SW+ ++ + L ++ M++
Sbjct: 185 NSILCMYADSDSLSARKL-FDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEA 241
Query: 240 -FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDS 297
D TV S+L + E + GR VH I GFDL DV V N+LI MYSK D+DS
Sbjct: 242 KTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 301
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +FD R VSW ++++G+ DEAL +F M D VTV+S++ C
Sbjct: 302 AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 361
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
K G + N + ++LID Y+ C + DA + ++ K VVS +TM
Sbjct: 362 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 421
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WA 467
I+G A G EA+ +F + + PN +T +++L AC+ + L WA
Sbjct: 422 ISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWA 469
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 290/568 (51%), Gaps = 41/568 (7%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+V WN+++ G L L+ + + +Q D T + A + KS+H
Sbjct: 79 NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ +G +D+ + N I Y + +DL A VF E LR VVSWNS+++G
Sbjct: 139 DRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVF--EEMPLRDVVSWNSLISGYNANGY 196
Query: 225 FDDSLNFYRHM------MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++++L Y M N F+ D+ T+ S+L + L G+ VH + I G++ D
Sbjct: 197 WNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 256
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ N LI+MY+KCG++ +++ +F G+ + VSW +MI+ Y Q G + ++L++F M+A
Sbjct: 257 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKA 316
Query: 339 -------------------------------AGELPDLVTVLSMISGCGQSGALELGKWF 367
G PD+ T+LS++ C A GK
Sbjct: 317 RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI 376
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
GL+ +V V N LI+MYSKCGS+ ++ ++F + K VV+WT +I+ C + GE
Sbjct: 377 HGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEG 436
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+A+ F ++ + P+ V F+A++ AC+H+G +E+G ++ K P ++HY
Sbjct: 437 KKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEG--LNYFHRMKKDYKIEPRIEHY 494
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R L +A DF+ SMP+K D+ IWG LL AC++ + EI E V+ + +L P
Sbjct: 495 ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNP 554
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
YV ++N YA G+WD V +IR +K +KK PG S I K F ++
Sbjct: 555 DDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFE 614
Query: 608 ESELTYPVLDCLALHSREEAYSSHLKWI 635
+ E +L LA +E Y ++L+++
Sbjct: 615 QFEEVNKLLGMLAGLMAKEGYIANLQFV 642
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 226/477 (47%), Gaps = 51/477 (10%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S+ + WNS IR + + L L+ + ++ ++P+ TFP + ACA L D ++
Sbjct: 77 SNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 136
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++ F + + LD A K+F+EM +RDV SWN+++ G+ G+
Sbjct: 137 IHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 196
Query: 122 LENVLRLFYN-----MRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
L ++Y M +V + D +T+ + QA H L K VH + I G + D
Sbjct: 197 WNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 256
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIE-----------------------------ERL 206
+ N I+ YAKC +L ++ VF G++ +
Sbjct: 257 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKA 316
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R +++WN+++A C + + + L M G D+ T++S+L A QG+ +
Sbjct: 317 RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI 376
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H G + DV V N LI MYSKCG + ++ +F + + V+WTA+IS G+
Sbjct: 377 HGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEG 436
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNA 385
+A+R F MEAAG +PD V +++I C SG +E G +F ++ +
Sbjct: 437 KKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYAC 496
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELD 441
++D+ S+ + A + ++P K S W +++ C ++G+ A + +++EL+
Sbjct: 497 VVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELN 553
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKIVVSWTTMIAGCALNGEFVEALDL 433
GL +V+ LI Y+ + +F A P V W ++I NG F EAL L
Sbjct: 43 GLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSL 102
Query: 434 FHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMA 491
+ + + L+P+ TF +V+ AC G L+ A SI D+ + D Y + +
Sbjct: 103 YSETQRIRLQPDTYTFPSVINAC--AGLLDFEMAKSI---HDRVLDMGFGSDLYIGNALI 157
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
D+ R L +A + MP++ D W +L+
Sbjct: 158 DMYCRFNDLDKARKVFEEMPLR-DVVSWNSLI 188
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 315/603 (52%), Gaps = 28/603 (4%)
Query: 10 LNRIYRSSTI--NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTF--PFIAKACA 65
+ R + SS + + + I+ V+ H+TL F Q+ + N++ F P + KAC+
Sbjct: 18 ITRRFLSSVVPTHSPSDHIKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACS 77
Query: 66 ---------KLSDLI-----YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
+L L Y+ I + + S + K ++ A ++FD M RD +WN+
Sbjct: 78 FTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNS 137
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS--LLKSVHSFGI- 168
M+ + Q G L L++ + +G + + L + + +H +
Sbjct: 138 MINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVV 197
Query: 169 --HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I + V + ++ Y +C D MA VF +E ++ VSW ++++GC +D
Sbjct: 198 DGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEME--VKNEVSWTAVISGCANNQDYD 255
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+L YR M G + T+++LL++ P + G+ +H + GFD S LI
Sbjct: 256 VALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALI 315
Query: 287 SMYSKCGD-IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+Y +CG + A +F+G R V W+++I YA++G+ D+AL+LF M P+
Sbjct: 316 YLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNY 375
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
VT+L++IS C + + G Y G+ ++ VCNALI+MY+KCGS+ D+R++F
Sbjct: 376 VTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLE 435
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+P + V+W +MI+ L+G +AL F+++ E ++ + VTFLAVL AC H G + +G
Sbjct: 436 MPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEG 495
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + + ++HY+C+ DL GR GKL++AL+ +++MP+K A IW +L+ +
Sbjct: 496 Q--QLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSS 553
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
CK+H ++I E ++ L + EP++AA Y ++ +A GRW + +R MK +++K
Sbjct: 554 CKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCY 613
Query: 586 GQS 588
G S
Sbjct: 614 GFS 616
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 278/556 (50%), Gaps = 13/556 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI----QAD 140
+ K L A K+FDEM +RD SWN M+ GF + G + F M+ +G QA
Sbjct: 2 YAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQAT 61
Query: 141 FVTVMGLTQAAIHAKHLSLL-KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
T++ +A L + K VH + G ++SV N I+SY KC VF
Sbjct: 62 LTTIL----SACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVF 117
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ ER V++W ++++G + + DSL + M + T +S L + +A
Sbjct: 118 DEMLER--NVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQA 175
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L +G +H G D V + L+ MYSKCG + +F+ +VS T +++G
Sbjct: 176 LREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAG 235
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+AQ G +EA++ F M AG D V +++ G +L LG+ + N
Sbjct: 236 FAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSN 295
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V N LI+MYSKCG + D+ ++F +P VSW +MIA A +G+ AL L+ ++
Sbjct: 296 PFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRL 355
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
+ P VTFL++L AC+H G +EKG + ++ + P ++HY+C+ D+LGR G
Sbjct: 356 KGVEPTDVTFLSLLHACSHVGLVEKG--MEFLKSMTEVHKLTPRMEHYACVVDMLGRAGL 413
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
L EA F++ +PIK D +W LL AC IH + E+G+Y A L P +PY+ +AN
Sbjct: 414 LNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANI 473
Query: 560 YALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
Y+ GRW A MK V K G S I +F ED+ H ++E+ Y VL L
Sbjct: 474 YSSKGRWKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVEDKMHPQAEIIYGVLAEL 533
Query: 620 ALHSREEAYSSHLKWI 635
H +E Y ++I
Sbjct: 534 FGHMIDEGYVPDKRYI 549
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 187/435 (42%), Gaps = 45/435 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDI-EPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WN I + F+QM+ + T I AC + ++M+H
Sbjct: 26 WNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILSACDRPELGFVNKMVHCLA 85
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G+ + + + KC ++FDEM R+V +W A++ G Q + L
Sbjct: 86 VLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIISGLVQSELYRDSL 145
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
RLF M ++ + +T + A + L +H +G+ +D V + + Y
Sbjct: 146 RLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKLGLQSDFCVESALMDMY 205
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC + +F + + VS ++AG ++++ F+ M+ G +D
Sbjct: 206 SKCGSMGDTLQIFESAGQLDK--VSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNM 263
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V ++L F +L G+ +HS I F + V N LI+MYSKCGD++ + +F +
Sbjct: 264 VSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMP 323
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
VSW +MI+ +A+ GD AL+L+ M G P VT LS++ C G +E G
Sbjct: 324 CMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGME 383
Query: 367 F--------------DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-V 411
F ++YAC ++DM + G + +A+ LP K V
Sbjct: 384 FLKSMTEVHKLTPRMEHYAC-------------VVDMLGRAGLLNEAKTFIEGLPIKPDV 430
Query: 412 VSWTTMIAGCALNGE 426
+ W ++ C ++G+
Sbjct: 431 LVWQALLGACGIHGD 445
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP-DLV 346
MY+K G + A LFD + R VSW MISG+ + G D F M++ G D
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T+ +++S C + + K A G + + V NALI Y KCG ++F +
Sbjct: 61 TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEM 120
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
E+ V++WT +I+G + + ++L LF ++ + PN +T+L+ L AC+ L +G
Sbjct: 121 LERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGC 180
Query: 467 AI 468
I
Sbjct: 181 QI 182
>gi|297742233|emb|CBI34382.3| unnamed protein product [Vitis vinifera]
Length = 705
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 297/628 (47%), Gaps = 54/628 (8%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ W S + + + + +F +M + ++PN T I +ACA+ DL Q+IH
Sbjct: 107 TVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQKRDLKLVQLIH 165
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
HI+K+ FV K L A K+ + RDV SW +++ G G +E
Sbjct: 166 CHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVE 225
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
L F+ M+ G+ + VT++ + QA + + VH + +V V N+ +
Sbjct: 226 KALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMNSLV 285
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y+ K +FC C GD G L
Sbjct: 286 EMYSINGYFKEGFQIFCNF----------------CFEGD---------------GQYLS 314
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+ +LL + L G +H + I +GF V N+LI MY++ D+A LF
Sbjct: 315 TETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFR 374
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE----LPDLVTVLSMISGCGQSG 359
+ R VSW MIS + +AL L + + G PD VT+L+ I C
Sbjct: 375 KMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLA 434
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+L+LG+ Y GL ++ V N+L+DMY KCG + A ++ +P + + SW ++IA
Sbjct: 435 SLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIA 494
Query: 420 GCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
+NG + AL++F QL RPN +TF +L AC H G + +G+ I + +
Sbjct: 495 AYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGF--EIFKSMKREY 552
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
S P ++H++CM DLLGR G+L+EA F+Q MP + +WG LL C + N++I E V
Sbjct: 553 SLEPRIEHFACMVDLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERV 612
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN-QVKKFPGQSLFHINGKTC 597
A L+ LEP S A V ++N YA +W+ A +R M+R+ +++K G S + G+
Sbjct: 613 AKKLYILEPKSRAWRVALSNVYASVNKWEDAAKVRAEMRRSEELQKEGGWSSVEVRGQEF 672
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSRE 625
F D H E+ + Y VL + H R+
Sbjct: 673 RFMVGDTMHPEARMVYAVLKGINEHIRD 700
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 224/501 (44%), Gaps = 62/501 (12%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIF 98
++LT + +CA DL IH +I+KS + KC R++ A K+F
Sbjct: 41 DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D M + V SW +M+ G Q G + V+ +F+ M L +Q + T+ + QA + L
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM-LETLQPNEYTLAVILQACAQKRDLK 159
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMV 216
L++ +H I G D + N+ I Y K L AE + +RL R VVSW S++
Sbjct: 160 LVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLM----KRLICRDVVSWTSVI 215
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+GC + +L F+ M +G + T++S+L + + VH + +
Sbjct: 216 SGCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWR 275
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF--F 334
+V V+N+L+ MYS I+GY ++G ++F F
Sbjct: 276 ENVFVMNSLVEMYS--------------------------INGYFKEG-----FQIFCNF 304
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
E G+ T+ +++ GC S L+LG+ Y G +V N+LI MY++
Sbjct: 305 CFEGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENE 364
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD----LRPNRVTFL 450
A +LF + + +VSW TMI+ +AL L ++ + P+ VT L
Sbjct: 365 RDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTIL 424
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
A +QAC+ L+ G +I ++ + + D+ G+ G+L A + M
Sbjct: 425 ASIQACSSLASLQLG---QVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEM 481
Query: 511 PIKSDAGIWGTLLCACKIHLN 531
P++ D G W +L+ A I+ N
Sbjct: 482 PVR-DLGSWNSLIAAYGINGN 501
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 137/265 (51%), Gaps = 3/265 (1%)
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+D +T + + + + L L +H+ + G+ +V V N+ + YAKC ++ A +
Sbjct: 40 SDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKL 99
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F + + +TVVSW SM++G FD+ ++ + M+ + + T+ +L +
Sbjct: 100 FDHMPD--KTVVSWTSMMSGHCQRGAFDEVISIFWRML-ETLQPNEYTLAVILQACAQKR 156
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L +L+H H I GF +D + N+LI Y+K G + +A L + R VSWT++IS
Sbjct: 157 DLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVIS 216
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
G G +++AL FF M+ G P+ VT+LS++ C ++ +W ++
Sbjct: 217 GCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRE 276
Query: 379 NVMVCNALIDMYSKCGSIGDARELF 403
NV V N+L++MYS G + ++F
Sbjct: 277 NVFVMNSLVEMYSINGYFKEGFQIF 301
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
L D +T + ++S C + L LG GL NV V N+L+DMY+KCG I DA +
Sbjct: 39 LSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAK 98
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
LF +P+K VVSWT+M++G G F E + +F +++E L+PN T +LQAC
Sbjct: 99 LFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLE-TLQPNEYTLAVILQACAQ 154
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 317/645 (49%), Gaps = 27/645 (4%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L R+ R + WN+ I V + +FR M + I P ++F + A
Sbjct: 170 LVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229
Query: 66 KLSDLIYSQMIHGHIVK--SPFV--------------KCDRLDCAYKIFDEMAVRDVASW 109
++SD + +++G +VK S FV + +D A +IFD R+ W
Sbjct: 230 RMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 110 NAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
N M+ G+ Q + LF M D VT + A + L L + +H++ +
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYIL 349
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
V + N I Y++C + + VF + ER VV+WN+MV+ D+
Sbjct: 350 KSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLER--DVVTWNTMVSAFVQNGLDDEG 407
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
L M GF +D T+ +LLS + G+ H++ I +G + + + LI M
Sbjct: 408 LMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDM 466
Query: 289 YSKCGDIDSARVLFDGICD--RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
Y+K G I +A+ LF+ D R +W AMI+GY Q G +E +F M P+ V
Sbjct: 467 YAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAV 526
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T+ S++ C G + LGK +A L NV V AL+DMYSK G+I A +F
Sbjct: 527 TLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAET 586
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
EK V++TTMI+ +G AL LFH ++ ++P+ VTF+A+L AC++ G +++G
Sbjct: 587 LEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEG- 645
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCA 525
+ I Q ++ P +HY C+AD+LGR G++ EA +FV+ + + + GIWG+LL A
Sbjct: 646 -LRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGA 704
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAP--YVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
C+IH E+G+ VA L ++E S+ +V ++N YA G WD V +R M++ + K
Sbjct: 705 CRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMK 764
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S + G F + D H + Y +L+ LA+ ++ Y
Sbjct: 765 EAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGY 809
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 159/624 (25%), Positives = 276/624 (44%), Gaps = 74/624 (11%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKACAKLS 68
+ I R +T+ WN+ I + N LL + +M+ + ++ TF KACA+
Sbjct: 60 FDSIPRPTTV-LWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQAR 118
Query: 69 DLIYSQMIHGHIVKSPF------------------VKCDRLDCAY---------KIFDEM 101
L + +H H+++S F + L AY ++FD M
Sbjct: 119 SLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTM 178
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
R+V +WN M+ + + L ++F M +GI+ V+ + + A
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNAN 238
Query: 162 SVHSFGIHIGVD--ADVSVCNTWISSYAKCDDLKMAELVF-CGIEERLRTVVSWNSMVAG 218
++ + +G D D V ++ I YA+ + A +F C +E R WN+M+ G
Sbjct: 239 VLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLE---RNTEVWNTMIGG 295
Query: 219 CTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
+ ++++ + +M + F LD T +S L++ + L GR +H++ + L
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTIL 355
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
V ++N +I MYS+CG I ++ +F + +R V+W M+S + Q G DE L L FAM+
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQ 415
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G + D VT+ +++S + E+GK Y G++ M + LIDMY+K G I
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD-SYLIDMYAKSGLIT 474
Query: 398 DARELFYALP--EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
A++LF ++ +W MIAG NG E +F +++E ++RPN VT ++L A
Sbjct: 475 TAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPA 534
Query: 456 CTHTGFLEKGWAI--------------------------SIIQYDDKGISYNPELDH--Y 487
C G + G I I Y + + E + Y
Sbjct: 535 CNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTY 594
Query: 488 SCMADLLGRKGKLKEALDFVQSM---PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL-- 542
+ M G+ G + AL +M IK D+ + +L AC ++ G + +
Sbjct: 595 TTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMER 654
Query: 543 -FKLEPHSAAPYVEMANKYALGGR 565
+K++P SA Y +A+ GR
Sbjct: 655 EYKIQP-SAEHYCCVADMLGRVGR 677
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 232/543 (42%), Gaps = 39/543 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAI 152
A +FD + WN +++GF + L + MR + D T +A
Sbjct: 56 ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC-------------DDLKMAELVF 199
A+ L L K++H + + V N+ ++ Y+ C ++ + VF
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ R R VV+WN+M++ ++ ++ +R MM G R + V++ +
Sbjct: 176 DTM--RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSD 233
Query: 260 LVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+++ + G D D V+++ I MY++ G +D AR +FD +R W MI
Sbjct: 234 YDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293
Query: 318 SGYAQKGDLDEALRLFF-AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
GY Q EA+ LF ME+ + D VT LS ++ Q LELG+ Y
Sbjct: 294 GGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSST 353
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
V++ NA+I MYS+CGSIG + ++F + E+ VV+W TM++ NG E L L
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFA 413
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLL 494
+ + + VT A+L ++ E G +I++ GI + +D Y + D+
Sbjct: 414 MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRH---GIQFEG-MDSY--LIDMY 467
Query: 495 GRKGKLKEALD-FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK--LEPH--- 548
+ G + A F ++ D W ++ + E G V + + + P+
Sbjct: 468 AKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVT 527
Query: 549 --SAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
S P LG + G A IR + RN F G +L + K+ T +
Sbjct: 528 LASILPACNPMGTIGLGKQIHGFA-IRCFLNRN---VFVGTALLDMYSKSGAITYAENVF 583
Query: 607 AES 609
AE+
Sbjct: 584 AET 586
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
I + +S + G A LFD I T V W +I G+ +AL LF+A A
Sbjct: 40 IRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASP 98
Query: 342 LP--DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC------ 393
P D T S + C Q+ +L+LGK + + +V N+L++MYS C
Sbjct: 99 SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPY 158
Query: 394 -GSIGD------ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
G+ D R +F + ++ VV+W TMI+ +EA +F +M + +RP
Sbjct: 159 LGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTP 218
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
V+F+ V A W +S YD+ + Y
Sbjct: 219 VSFVNVFPAV---------WRMS--DYDNANVLY 241
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/594 (30%), Positives = 313/594 (52%), Gaps = 30/594 (5%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA------------ 63
+ T + ++QI+ ++K H+TL LF ++ + P + KA
Sbjct: 13 APTCSSPSNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQ 72
Query: 64 --CAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
C L +S+ + + + + + K + A ++FD M RD +WN+++ G+ G+
Sbjct: 73 LHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGY 132
Query: 122 LENVLRLFYNMRLVGIQ------ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
LE L ++ L+G+ A V++ G + + + L V+ IG
Sbjct: 133 LEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNE---RIGQSMF 189
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+S + Y +C D MA VF G+E ++ VVSW +M++GC +D++ +R M
Sbjct: 190 LST--ALVDFYFRCGDSLMALRVFDGME--VKNVVSWTTMISGCIAHQDYDEAFACFRAM 245
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD- 294
G + T ++LLS+ P + G+ +H + +GF+ S + L++MY +CG+
Sbjct: 246 QAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEP 305
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ A ++F+G R V W+++I ++++GD +AL+LF M P+ VT+L++IS
Sbjct: 306 MHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISA 365
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C +L+ G Y G ++ V NALI+MY+KCG + +R++F +P + V+W
Sbjct: 366 CTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTW 425
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+++I+ L+G +AL +F+++ E ++P+ +TFLAVL AC H G + +G I
Sbjct: 426 SSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRA 485
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D I ++HY+C+ DLLGR GKL+ AL+ ++MP+K A IW +L+ ACK+H ++I
Sbjct: 486 DCEIPLT--IEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDI 543
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
E +A L + EP++A Y + YA G W +R MK ++KK G S
Sbjct: 544 AEMLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFS 597
>gi|15230248|ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial; Flags: Precursor
gi|9293988|dbj|BAB01891.1| unnamed protein product [Arabidopsis thaliana]
gi|332643452|gb|AEE76973.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 601
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 280/535 (52%), Gaps = 11/535 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A K+FDE+ R V+ +N+M+V +++ + VLRL+ M IQ D T +A +
Sbjct: 69 ARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS 128
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
L ++V + G DV VC++ ++ Y KC + AE++F + +R V+ W
Sbjct: 129 GLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR--DVICWT 186
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+MV G K ++ FYR M GF D ++ LL + GR VH +
Sbjct: 187 TMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT 246
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G ++V V +L+ MY+K G I+ A +F + +T VSW ++ISG+AQ G ++A
Sbjct: 247 GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAV 306
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M++ G PDLVT++ ++ C Q G+L+ G+ Y + D V AL+DMYSKC
Sbjct: 307 VEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKC 365
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G++ +RE+F + K +V W TMI+ ++G E + LF ++ E ++ P+ TF ++L
Sbjct: 366 GALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLL 425
Query: 454 QACTHTGFLEKG---WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
A +H+G +E+G +++ I +Y P HY C+ DLL R G+++EALD + S
Sbjct: 426 SALSHSGLVEQGQHWFSVMINKY-----KIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
+ + IW LL C H N+ +G+ A + +L P S ++N +A +W VA
Sbjct: 481 KLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVA 540
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
+R +M+ ++K PG S +NG+ TF ED H E VL L R+
Sbjct: 541 KVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRD 595
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 195/428 (45%), Gaps = 37/428 (8%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC-------------A 65
++ +NS I + L L+ QM I+P++ TF KAC
Sbjct: 81 VSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWC 140
Query: 66 KLSDLIYSQMIH-GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
K D Y + V + ++KC ++D A +F +MA RDV W M+ GFAQ G
Sbjct: 141 KAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLK 200
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ + M+ G D V ++GL QA+ + +SVH + G+ +V V + +
Sbjct: 201 AVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVD 260
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAK +++A VF + +T VSW S+++G + + M GF+ D+
Sbjct: 261 MYAKVGFIEVASRVFSRM--MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDL 318
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+V +L + +L GRLVH + I LD L+ MYSKCG + S+R +F+
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCY-ILKRHVLDRVTATALMDMYSKCGALSSSREIFEH 377
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + V W MIS Y G+ E + LF M + PD T S++S SG +E G
Sbjct: 378 VGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQG 437
Query: 365 K-WF----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDA------RELFYALPEKIVVS 413
+ WF + Y K V LID+ ++ G + +A +L ALP
Sbjct: 438 QHWFSVMINKYKIQPSEKHYV----CLIDLLARAGRVEEALDMINSEKLDNALP-----I 488
Query: 414 WTTMIAGC 421
W +++GC
Sbjct: 489 WVALLSGC 496
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 188/396 (47%), Gaps = 15/396 (3%)
Query: 160 LKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
+ +H+F I G + S+ I+S + ++ A VF + +R +V +NSM+
Sbjct: 33 ITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSV--YNSMIVV 90
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ G D+ L Y M+ + D +T + + + L +G V + +G+ D
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V V ++++++Y KCG +D A VLF + R + WT M++G+AQ G +A+ + M+
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G D V +L ++ G G ++G+ Y GL NV+V +L+DMY+K G I
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F + K VSW ++I+G A NG +A + ++ L +P+ VT + VL AC+
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDA 516
G L+ G + I LD + A D+ + G L + + + + + D
Sbjct: 331 VGSLKTGRLVHCY------ILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVG-RKDL 383
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
W T++ IH N G+ V K+ + P
Sbjct: 384 VCWNTMISCYGIHGN---GQEVVSLFLKMTESNIEP 416
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 13/150 (8%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T W S I A+K +M+ +P+ +T + AC+++ L +++H
Sbjct: 282 TAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVH 341
Query: 78 GHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+I+K + KC L + +IF+ + +D+ WN M+ + G +
Sbjct: 342 CYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQE 401
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
V+ LF M I+ D T L A H+
Sbjct: 402 VVSLFLKMTESNIEPDHATFASLLSALSHS 431
>gi|15227389|ref|NP_179312.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|4584344|gb|AAD25139.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330251504|gb|AEC06598.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 314/614 (51%), Gaps = 36/614 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + ++ + L F +++ EPN T + AC L + IHG++
Sbjct: 94 SWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYV 151
Query: 81 VKSPFVKCDRLD----CAY---------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++S F + C Y K+FDEM+ RDV SW+ ++ + Q L+
Sbjct: 152 IRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLK 211
Query: 128 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISS 185
LF M + D VTV + +A + + + +SVH F I G D ADV VCN+ I
Sbjct: 212 LFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDM 271
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y+K D+ A VF E R +VSWNS++AG + ++D++L + M+ +D
Sbjct: 272 YSKGFDVDSAFRVF--DETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEV 329
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
TVVSLL E + + +H I G++ + +++LI Y+ C +D A + D +
Sbjct: 330 TVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM 389
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ VS + MISG A G DEA+ +F M + P+ +TV+S+++ C S L K
Sbjct: 390 TYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSK 446
Query: 366 WFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
W A L N + V +++D Y+KCG+I AR F + EK ++SWT +I+ A+N
Sbjct: 447 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNP 482
G +AL LF ++ + PN VT+LA L AC H G ++KG I S+++ D K P
Sbjct: 507 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK-----P 561
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHLN--IEIGEYV 538
L HYSC+ D+L R G++ A++ ++++P +K+ A WG +L C+ I E V
Sbjct: 562 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVV 621
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +LEP ++ Y+ ++ +A W+ VA +R ++K +V+ G S+
Sbjct: 622 AEVL-ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKR 680
Query: 599 FTAEDRY-HAESEL 611
F A D+ ++SEL
Sbjct: 681 FLAGDKLSQSDSEL 694
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/457 (29%), Positives = 220/457 (48%), Gaps = 21/457 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNN-LTFPFIAKACAKLSDLIYSQM 75
S + +S+I++A + + + + ++++ ++ N+ FP + KACAKLS +
Sbjct: 7 SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLS-----WL 61
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
G+ + ++KC L + FD M RD SWN ++ G GF E L F +R+
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLK 193
G + + T++ IHA + +H + I G SV N+ + YA D L
Sbjct: 122 GFEPNTSTLV----LVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS 177
Query: 194 MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLS 252
+L F + E R V+SW+ ++ + L ++ M++ D TV S+L
Sbjct: 178 ARKL-FDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLK 234
Query: 253 SFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
+ E + GR VH I GFDL DV V N+LI MYSK D+DSA +FD R V
Sbjct: 235 ACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIV 294
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SW ++++G+ DEAL +F M D VTV+S++ C K
Sbjct: 295 SWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
G + N + ++LID Y+ C + DA + ++ K VVS +TMI+G A G EA+
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAI 414
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WA 467
+F + + PN +T +++L AC+ + L WA
Sbjct: 415 SIFCHMRDT---PNAITVISLLNACSVSADLRTSKWA 448
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/431 (37%), Positives = 241/431 (55%), Gaps = 10/431 (2%)
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+++ G D +++ Y M + G R D T ++ + L G +H H +
Sbjct: 103 WNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVV 162
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
+G + +V L+ MY K G++ A LF + +R V+W A+I+ Q G +AL+
Sbjct: 163 KHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQ 222
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
F M AG PD VT++S +S CG G LE G+ +A G+ N++V NA +DM +
Sbjct: 223 SFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCA 282
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCG + A LF +P++ V+SW+T+I G A+NGE +AL LF ++ ++PN VTFLA
Sbjct: 283 KCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLA 342
Query: 452 VLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
VL AC+HTG + +GW + Q DDK I P +HY+CM DLLGR G L+EA +F++
Sbjct: 343 VLSACSHTGRVNEGWQYFNFMAQSDDKNI--QPRKEHYACMVDLLGRSGHLEEAYNFIKI 400
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
MPI++D GIWG LL AC IH NI++G++VA LF+L P A+ +V ++N YA GRW V
Sbjct: 401 MPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCV 460
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
+R MK+ +K S NG+ D+ H +S L+ L + Y
Sbjct: 461 EKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGY- 519
Query: 630 SHLKWIPEHEA 640
IPE ++
Sbjct: 520 -----IPETDS 525
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 10/337 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FDEM WN ++ G+ + G + + ++ MR +G++ D T + +A
Sbjct: 88 ARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAE 147
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
L +H + G++ +V + Y K +L AE +F + E R +V+WN
Sbjct: 148 LAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVE--RDLVAWN 205
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+++A C +L +R M G + D T+VS LS+ L G ++
Sbjct: 206 ALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREE 265
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G D ++ V N + M +KCGD+D A LFD + R +SW+ +I GYA G+ ++AL LF
Sbjct: 266 GIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALF 325
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD-----NVMVCNALID 388
M+ G P+ VT L+++S C +G + G + N+ K+ C ++D
Sbjct: 326 SRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYAC--MVD 383
Query: 389 MYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+ + G + +A +P E W ++ CA++
Sbjct: 384 LLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 16/246 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ ++ V K + ++ +M+ + P+ TFPF+ KACA+L++L +HGH+V
Sbjct: 103 WNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVV 162
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K +VK L CA +F M RD+ +WNA++ Q GF L+
Sbjct: 163 KHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQ 222
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + GI+ D VT++ A H L + ++ F G+D+++ V N + A
Sbjct: 223 SFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCA 282
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D+ A +F + + R V+SW++++ G + + +L + M G + + T
Sbjct: 283 KCGDMDKAMNLFDEMPQ--RNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTF 340
Query: 248 VSLLSS 253
+++LS+
Sbjct: 341 LAVLSA 346
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
WN+ I V + K L FR+M I+P+++T AC L L
Sbjct: 204 WNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAR 263
Query: 71 ---IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
I S +I + KC +D A +FDEM R+V SW+ ++ G+A G E L
Sbjct: 264 EEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALA 323
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIH 153
LF M+ G+Q ++VT + + A H
Sbjct: 324 LFSRMKNQGVQPNYVTFLAVLSACSH 349
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/593 (31%), Positives = 294/593 (49%), Gaps = 74/593 (12%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
I C + + Y+ MI G +VK +LD A ++FDEM V+ S+ M++GF+Q
Sbjct: 123 IFDVCPRSDPVSYNVMISG------YVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQN 176
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ LF MR VG+ + VT+ L A H + + +H I + + V V
Sbjct: 177 ECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVS 236
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG--------------------- 218
+ Y C L A +F + E+ +VSWN M+ G
Sbjct: 237 TNLLRMYCVCSSLVEARALFDEMPEK--NIVSWNVMLNGYSKAGFVDSARVVFERIPNKD 294
Query: 219 -CTYG---------DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
T+G ++ +++L YR M+ G+ + +V L+S A+ +G+ + S
Sbjct: 295 LVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLS 354
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDI-------------------------------DS 297
+ GFD + +T+I +Y+ CG I D
Sbjct: 355 AVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDR 414
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A LF+ + +R SW+ MISGY Q + AL LF M A+G P+ VT++S++S
Sbjct: 415 AMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIAT 474
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK--IVVSWT 415
SG L+ G+W Y + + + + A+IDMY+KCGSI +A E+FY + EK V W
Sbjct: 475 SGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWN 534
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+I G A++G +L +F L ++ N +TF+ VL AC H G +E G + +
Sbjct: 535 AIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSE 594
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
I +P++ HY CM DLLGR G+L+EA + ++SMP+K+D IWGTLL AC+ H N+++G
Sbjct: 595 HSI--DPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVG 652
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
E A L +LEP A V ++N YA G+W+ +R M+ +++++ PG S
Sbjct: 653 ERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQRLPGYS 705
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 207/466 (44%), Gaps = 97/466 (20%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF----------------- 199
LS K +H G+ ++ + N+ I+ Y KC L A+ +F
Sbjct: 82 LSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISG 141
Query: 200 ----------CGI--EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
C + E ++ VS+ +M+ G + + ++ ++ ++ M G + T+
Sbjct: 142 YVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTI 201
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM------------------- 288
+L+S++ + R++H I F+ V V L+ M
Sbjct: 202 ATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPE 261
Query: 289 ------------YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
YSK G +DSARV+F+ I ++ V+W +I GY + ++EAL ++ +M
Sbjct: 262 KNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSM 321
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKW---------FDNY------------ACSG- 374
+AG P+ V ++ +ISGCG++ A+ G+ FD Y AC
Sbjct: 322 ISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRI 381
Query: 375 ---------GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
G K+NV NALI Y + I A ELF +PE+ V SW+TMI+G N
Sbjct: 382 NEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNE 441
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPEL 484
+ AL+LFH+++ ++PN VT ++VL A +G L++G WA + + +S N
Sbjct: 442 QPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLS- 500
Query: 485 DHYSCMADLLGRKGKLKEALD-FVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G + AL+ F + S W ++C +H
Sbjct: 501 ---AAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVH 543
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 213/476 (44%), Gaps = 83/476 (17%)
Query: 31 NKNEA-HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVK-- 87
++NE ++ + LF+QM+ + PN +T + A + + +M+HG ++K F +
Sbjct: 174 SQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFV 233
Query: 88 ------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN----------- 124
C L A +FDEM +++ SWN ML G+++ GF+++
Sbjct: 234 LVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNK 293
Query: 125 --------------------VLRLFYNMRLVG------IQADFVTVMGLTQAAIHAKHL- 157
L ++ +M G + D ++ G T A + L
Sbjct: 294 DLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLL 353
Query: 158 -SLLKS-------VHSFGIHI----------------GVDADVSVCNTWISSYAKCDDLK 193
+++K + S IH+ G +V+ N I+ Y + +
Sbjct: 354 SAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMID 413
Query: 194 MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
A +F + E R V SW++M++G T ++ + +L + M+ +G + + T+VS+LS+
Sbjct: 414 RAMELFNEMPE--RDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSA 471
Query: 254 FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR--TRV 311
L +GR H + + + ++ +I MY+KCG I++A +F I ++ T
Sbjct: 472 IATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVS 531
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNY 370
W A+I G A G + +L++F +E + +T + +++ C G +E GK F +
Sbjct: 532 PWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSM 591
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNG 425
+ ++ ++D+ + G + +A E+ ++P K VV W T++A C +G
Sbjct: 592 KSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHG 647
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 31/146 (21%)
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR----- 400
+ ++S + C L GK GL N + N+LI+MY KCG + DA+
Sbjct: 67 LVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDV 126
Query: 401 --------------------------ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
ELF +P K VS+TTMI G + N + +A++LF
Sbjct: 127 CPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELF 186
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTG 460
Q+ + + PN VT ++ A +H G
Sbjct: 187 KQMRNVGVVPNEVTIATLVSAYSHFG 212
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
W++ I + + L LF +M + I+PN +T + A A L + H ++
Sbjct: 430 WSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVH 489
Query: 81 -------------VKSPFVKCDRLDCAYKIFDEMAVR--DVASWNAMLVGFAQMGFLENV 125
+ + KC ++ A ++F E+ + V+ WNA++ G A G
Sbjct: 490 NNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLS 549
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDADVSV 178
L++F ++ I+ + +T +G+ A H +H +KS HS +D D+
Sbjct: 550 LKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHS------IDPDIKH 603
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC-TYGD 223
+ + L+ AE + + + V+ W +++A C T+G+
Sbjct: 604 YGCMVDLLGRAGRLEEAEEMIRSMPMKADVVI-WGTLLAACRTHGN 648
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/601 (29%), Positives = 303/601 (50%), Gaps = 21/601 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + LF MK++ + + +F + K A + + +HG ++
Sbjct: 69 WNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC+R++ A++ F E++ + SWNA++ GF Q+ ++
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188
Query: 128 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M + + D T L +LLK VH+ + +G+ ++++CN ISSY
Sbjct: 189 LLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSY 248
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A C + A+ VF G+ + ++SWNSM+AG + + + + + M + D+ T
Sbjct: 249 ADCGSVSDAKRVFDGLGGS-KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK--CGDIDSARVLFDG 304
LLS+ E + G+ +H I G + S N LISMY + G ++ A LF+
Sbjct: 308 YTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES 367
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + +SW ++I+G+AQKG ++A++ F + ++ D +++ C L+LG
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-IVVSWTTMIAGCAL 423
+ A G N V ++LI MYSKCG I AR+ F + K V+W MI G A
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G +LDLF Q+ +++ + VTF A+L AC+HTG +++G + ++ + P
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG--LELLNLMEPVYKIQPR 545
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HY+ DLLGR G + +A + ++SMP+ D + T L C+ IE+ VA L
Sbjct: 546 MEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL 605
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
++EP YV +++ Y+ +W+ A+++ MMK VKK PG S I + F AED
Sbjct: 606 EIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAED 665
Query: 604 R 604
R
Sbjct: 666 R 666
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 188/412 (45%), Gaps = 11/412 (2%)
Query: 61 AKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
A C +SD+ S I +K F L A +FDEM RD SWN M+ G+ G
Sbjct: 26 AIKCGSISDIYVSNRILDSYIKFGF-----LGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
LE+ LF M+ G D + L + K L + VH I G + +V V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM-MYNG 239
+ + YAKC+ ++ A F I E VSWN+++AG + M M
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISE--PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+D T LL+ P + VH+ + G ++++ N +IS Y+ CG + A+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 300 VLFDGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+FDG+ + +SW +MI+G+++ + A LF M+ D+ T ++S C
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSK--CGSIGDARELFYALPEKIVVSWTT 416
GK GL+ NALI MY + G++ DA LF +L K ++SW +
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+I G A G +A+ F L +++ + F A+L++C+ L+ G I
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 145/306 (47%), Gaps = 16/306 (5%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
L H + I G +D+ V N + SY K L A ++F E R VSWN+M++G
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLF--DEMPKRDSVSWNTMISGY 76
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
T K +D+ + M +G +D + LL + G VH I G++ +V
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA- 338
V ++L+ MY+KC ++ A F I + VSW A+I+G+ Q D+ A L ME
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 339 ------AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
AG L+T+L C L K GL+ + +CNA+I Y+
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCN------LLKQVHAKVLKLGLQHEITICNAMISSYAD 250
Query: 393 CGSIGDARELFYAL-PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
CGS+ DA+ +F L K ++SW +MIAG + + A +LF Q+ + + T+
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 452 VLQACT 457
+L AC+
Sbjct: 311 LLSACS 316
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S + WNS I K + + F ++ ++I+ ++ F + ++C+ L+ L Q
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQM 119
IH KS FV KC ++ A K F +++ + +WNAM++G+AQ
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G + L LF M ++ D VT + A H
Sbjct: 489 GLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 281/536 (52%), Gaps = 17/536 (3%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+W++++ + L F +MR + + + L +A+ KH L S+H+
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVF-----CGIE--------ERLRTVVSWNS 214
+ +G+D+D+ + N I++YAK + VF GI+ +R VVSWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++AG + ++L+ R M NG + D T+ S+L F + +G+ +H + +
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GFD DV + ++LI MY+KC ++ + F + + +SW ++I+G Q G+ D L F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M P V+ S+I C AL LG+ G DN + ++L+DMY+KC
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G+I AR +F + ++ +V+WT +I GCA++G ++A+ LF ++E +RP V F+AVL
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP-I 512
AC+H G +++GW D GI+ P L+HY+ +ADLLGR G+L+EA DF+ +M +
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIA--PGLEHYAAVADLLGRAGRLEEAYDFISNMRGV 494
Query: 513 KSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANI 572
+ +W LL AC+ H ++E+ E V L ++ + YV M+N Y+ RW A +
Sbjct: 495 QPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARL 554
Query: 573 RTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
R M++ +KK P S + + TF A D+ H + LD L +E Y
Sbjct: 555 RIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGY 610
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 212/457 (46%), Gaps = 43/457 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+S I+ + + H + F M+ + PN FP + KA L + +H V
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137
Query: 82 K-----------------SPFVKCDR------------LDCAYKIFDEMAVRDVASWNAM 112
+ + F + +DC K+FD M VRDV SWN +
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197
Query: 113 LVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIH 169
+ GFAQ G L + M G ++ D T+ + I A+H+ + K +H + +
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSIL--PIFAEHVDVNKGKEIHGYAVR 255
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G D DV + ++ I YAKC+ L+ + F + + +SWNS++AGC +FD L
Sbjct: 256 NGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPR--KDAISWNSIIAGCVQNGEFDRGL 313
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
F+R M+ + + S++ + AL GR +H + GFD + + ++L+ MY
Sbjct: 314 GFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMY 373
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+KCG+I AR +FD I R V+WTA+I G A G +A+ LF M G P V +
Sbjct: 374 AKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFM 433
Query: 350 SMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-- 406
++++ C +G ++ G ++F++ G+ + A+ D+ + G + +A + +
Sbjct: 434 AVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRG 493
Query: 407 --PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
P V W+ ++A C + A + +L+ +D
Sbjct: 494 VQPTGSV--WSILLAACRAHKSVELAEKVLDKLLSVD 528
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 261/483 (54%), Gaps = 5/483 (1%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L Q+ I +K L+ K +H+ H+G+ + + + YA + L A +F I ++
Sbjct: 53 LLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ- 111
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ WN ++ G + D+++ Y M+ G R D T+ +L + A+ +GR +
Sbjct: 112 -NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSI 170
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + I G++ D+ V LI MY+KCG + A +FD I R V W +M++ YAQ G
Sbjct: 171 HEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHP 230
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
DE++ L M A G P T++++IS L G+ + G + N V AL
Sbjct: 231 DESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTAL 290
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY+KCGS+ A LF L EK VVSW +I G A++G V ALDLF ++ + D RP+
Sbjct: 291 IDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDH 349
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TF+ VL AC+ L++G A+ + D GI+ P + HY+CM DLLG G+L EA D
Sbjct: 350 ITFVGVLAACSRGRLLDEGRALYNLMVRDYGIT--PTVQHYTCMIDLLGHCGQLDEAYDL 407
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
+++M +K D+G+WG LL +CKIH N+E+ E L +LEP + YV +AN YA G+W
Sbjct: 408 IRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKW 467
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
+GV +R +M ++KK S + K F A D H+ S+ Y L L E
Sbjct: 468 EGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEA 527
Query: 627 AYS 629
Y+
Sbjct: 528 GYA 530
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 173/352 (49%), Gaps = 9/352 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A +FD++ +++ WN ++ G+A G +N + L++ M G++ D T+ + +A
Sbjct: 101 ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSA 160
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ +S+H + I G + D+ V I YAKC + A VF I +R V WN
Sbjct: 161 LSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIV--VRDAVLWN 218
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
SM+A D+S++ R M NG R T+V+++SS L GR +H G +
Sbjct: 219 SMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRH 278
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GF + V LI MY+KCG + A LF+ + ++ VSW A+I+GYA G AL LF
Sbjct: 279 GFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLF 338
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG-GLKDNVMVCNALIDMYSK 392
M + PD +T + +++ C + L+ G+ N G+ V +ID+
Sbjct: 339 DKMRKE-DRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGH 397
Query: 393 CGSIGDARELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
CG + +A +L + P+ V W ++ C ++G A +L+EL+
Sbjct: 398 CGQLDEAYDLIRNMSVKPDSGV--WGALLNSCKIHGNVELAELALEKLIELE 447
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 155/342 (45%), Gaps = 27/342 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR ++L+ +M + P+N T PF+ KAC+ LS + + IH +++
Sbjct: 116 WNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVI 175
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS + KC + A ++FD++ VRD WN+ML +AQ G + +
Sbjct: 176 KSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESIS 235
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G++ T++ + ++ L + +H FG G ++ V I YA
Sbjct: 236 LCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYA 295
Query: 188 KCDDLKMAELVFCGIEERLRT--VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC +K+A +F ERLR VVSWN+++ G +L+ + M R D
Sbjct: 296 KCGSVKVALALF----ERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHI 350
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T V +L++ L +GR +++ + YG V +I + CG +D A L
Sbjct: 351 TFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRN 410
Query: 305 ICDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEL-PD 344
+ + W A+++ G+++ A A+E EL PD
Sbjct: 411 MSVKPDSGVWGALLNSCKIHGNVELAE---LALEKLIELEPD 449
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 7/312 (2%)
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTT---VVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
+ F SL ++ + F TT SLL S + +AL G+ +H+ H G
Sbjct: 21 FSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAY 80
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+ + L+ +Y+ + +AR LFD I + W +I GYA G D A+ L+ M
Sbjct: 81 NQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKML 140
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G PD T+ ++ C A+ G+ Y G + ++ V ALIDMY+KCG +
Sbjct: 141 DYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVM 200
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
DA +F + + V W +M+A A NG E++ L ++ +RP T + V+ +
Sbjct: 201 DAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSA 260
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
L G I + G N ++ + + D+ + G +K AL + + K
Sbjct: 261 DVACLPYGREIHGFGW-RHGFQSNDKVK--TALIDMYAKCGSVKVALALFERLREKRVVS 317
Query: 518 IWGTLLCACKIH 529
W ++ +H
Sbjct: 318 -WNAIITGYAMH 328
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/589 (30%), Positives = 282/589 (47%), Gaps = 17/589 (2%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP-------------FVK 87
R M I N ++ ++ K C L L ++ H + + +
Sbjct: 67 FIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMANSNKFIDNCILQMYCD 126
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C A + FD++ RD++SW ++ + + G ++ + LF M +GI +F L
Sbjct: 127 CKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTL 186
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+ L L K +HS I I AD+S+ + Y KC L AE+ + +
Sbjct: 187 IMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRK-- 244
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+ V+ ++ G T + D+L + M+ G LD +L + L G+ +H
Sbjct: 245 SAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIH 304
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
S+ I G + +VSV L+ Y KC ++AR F+ I + SW+A+I+GY Q G D
Sbjct: 305 SYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFD 364
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
AL +F + + G L + ++ C L G A GL + +A+I
Sbjct: 365 RALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMI 424
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
MYSKCG + A + F A+ + V+WT +I A +G+ EAL LF ++ +RPN V
Sbjct: 425 TMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVV 484
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
TF+ +L AC+H+G +++G D G+ NP +DHY+CM D+ R G L EAL+ +
Sbjct: 485 TFIGLLNACSHSGLVKEGKQFLDSMTDKYGV--NPTIDHYNCMIDIYSRAGLLLEALEVI 542
Query: 508 QSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWD 567
+SMP + D W +LL C N+EIG A +F+L+P +A YV M N YAL G+WD
Sbjct: 543 RSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWD 602
Query: 568 GVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
A R MM ++K S + GK F DR+H ++E Y L
Sbjct: 603 EAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKL 651
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 143/305 (46%), Gaps = 18/305 (5%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK----------SP---- 84
LLLF +M +E + F I KACA L DL + IH + +K +P
Sbjct: 266 LLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDF 325
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+VKC R + A + F+ + + SW+A++ G+ Q G + L +F +R G+ +
Sbjct: 326 YVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIY 385
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ QA L +H+ I G+ A +S + I+ Y+KC + A F I++
Sbjct: 386 NNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDK 445
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
V+W +++ Y K ++L ++ M +G R +V T + LL++ + +G+
Sbjct: 446 --PDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGK 503
Query: 265 -LVHSHGIHYGFDLDVSVINTLISMYSKCG-DIDSARVLFDGICDRTRVSWTAMISGYAQ 322
+ S YG + + N +I +YS+ G +++ V+ + +SW +++ G
Sbjct: 504 QFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWS 563
Query: 323 KGDLD 327
+ +L+
Sbjct: 564 RRNLE 568
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 16/213 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I + + L +F+ ++ + N+ + I +AC+ +SDLI IH +
Sbjct: 350 WSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAI 409
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K V KC ++D A++ F + D +W A++ A G LR
Sbjct: 410 KKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALR 469
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS-VHSFGIHIGVDADVSVCNTWISSY 186
LF M+ G++ + VT +GL A H+ + K + S GV+ + N I Y
Sbjct: 470 LFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIY 529
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
++ L A V + V+SW S++ GC
Sbjct: 530 SRAGLLLEALEVIRSMPFE-PDVMSWKSLLGGC 561
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 194/625 (31%), Positives = 303/625 (48%), Gaps = 91/625 (14%)
Query: 35 AHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH-GHI--------VKSP 84
AH ++ LF+ ++ P + ++ K K +L ++ ++ GHI +
Sbjct: 80 AHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLFHAYVLKLGHIDDHFIRNAILDM 139
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K ++D A +F++MA R +A WN+M+ G + G + LF M
Sbjct: 140 YAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA---------- 189
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
++ + ++ YAK DL+ A F + E
Sbjct: 190 -----------------------------RNIITWTSMVTGYAKMGDLESARRYFDEMPE 220
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS----------- 253
R +VVSWN+M + + ++LN + M+ G D TT V +SS
Sbjct: 221 R--SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLAD 278
Query: 254 ---------FVCPEALVQGRLVHSHGIHYGFDLDVSVI------------NTLISMYSKC 292
+ + V+ L+ H ++ ++ N +IS Y++
Sbjct: 279 SILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRV 338
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSM 351
G + AR LFD + R VSW +MI+GYAQ G+ ++ LF M + ++ PD VT+ S+
Sbjct: 339 GKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASV 398
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+S CG GAL+L W + +K + N+LI MYSKCGS+ DA +F + + V
Sbjct: 399 LSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDV 458
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
VS+ T+I+G A NG EA+ L + E + P+ VT++ VL AC+H G L +G +
Sbjct: 459 VSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVF-- 516
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
K I P +DHY+CM DLLGR G+L EA +QSMP+K AG++G+LL A +IH
Sbjct: 517 ----KSIQ-APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKR 571
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+ +GE A LF+LEP + YV ++N YA GRW+ V +R MMK+ +KK G S
Sbjct: 572 VGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVE 631
Query: 592 INGKTCTFTAEDRYHAESELTYPVL 616
G+ FT DR H +S+ Y +L
Sbjct: 632 YKGQVHKFTVGDRSHEQSKDIYKLL 656
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 200/457 (43%), Gaps = 95/457 (20%)
Query: 65 AKLSDLIYSQMIHGHIVKSPF-----------VKCDRLDC--AY--KIFDEMAVRDVASW 109
+K+S++ + HGH+V + + C RL AY IF D + +
Sbjct: 9 SKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVY 68
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
+ ML +++MG V+ LF + ++ + L + A + +L H++ +
Sbjct: 69 SCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNL-----FHAYVLK 123
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
+G D + N + YAK + +A +F + ER T+ WNSM++GC +++
Sbjct: 124 LGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAER--TLADWNSMISGCWKSGNETEAV 181
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M P ++ ++++ Y
Sbjct: 182 VLFNMM---------------------PAR------------------NIITWTSMVTGY 202
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+K GD++SAR FD + +R+ VSW AM S YAQK EAL LF M G PD T +
Sbjct: 203 AKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWV 262
Query: 350 SMISGCGQSG--------------------------ALELGKWFDNYACSGGLKD----- 378
IS C G L++ F N + + D
Sbjct: 263 VTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQ 322
Query: 379 -NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N + N +I Y++ G + ARELF +P++ VVSW +MIAG A NGE +++LF ++
Sbjct: 323 RNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEM 382
Query: 438 ME-LDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQ 472
+ +D++P+ VT +VL AC H G L+ W + I++
Sbjct: 383 ISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVR 419
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 183/434 (42%), Gaps = 82/434 (18%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS I + ++LF M +I + ++ M+
Sbjct: 160 TLADWNSMISGCWKSGNETEAVVLFNMMPARNI-------------------ITWTSMVT 200
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G + K L+ A + FDEM R V SWNAM +AQ + L LF+ M GI
Sbjct: 201 G------YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254
Query: 138 QADFVT-VMGLTQAA--------------IHAKHLSL-------LKSVHS-FGI------ 168
D T V+ ++ + I KH+ L L +H+ FG
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314
Query: 169 ---HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+G + N IS+Y + L +A +F + +R VVSWNSM+AG +
Sbjct: 315 IFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKR--DVVSWNSMIAGYAQNGES 372
Query: 226 DDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
S+ ++ M+ + D T+ S+LS+ AL V L +S N+
Sbjct: 373 AMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNS 432
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MYSKCG + A +F + R VS+ +ISG+A G EA++L ME G PD
Sbjct: 433 LIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPD 492
Query: 345 LVTVLSMISGCGQSGALELGK---------WFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
VT + +++ C +G L GK D+YAC ++D+ + G
Sbjct: 493 HVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYAC-------------MVDLLGRAGE 539
Query: 396 IGDARELFYALPEK 409
+ +A+ L ++P K
Sbjct: 540 LDEAKMLIQSMPMK 553
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/599 (31%), Positives = 310/599 (51%), Gaps = 37/599 (6%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVK----CDRLDCAYK--------- 96
+ P+NL + + L L +Q H I+ + F + RL AY
Sbjct: 24 LSPHNLLH--LLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSK 81
Query: 97 -IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
+FD + ++V WN+++ G+ + +N + LF M + D+ T+ +++ + +
Sbjct: 82 LVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRCLLPDDY-TLATISKVSGEIQ 140
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L L K +H + IG +D+ V N+ +S Y +C + A VF + +R V S+N +
Sbjct: 141 DLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQR--NVGSFNVI 198
Query: 216 VAGCTYGDKFDDSL-----NFYRHMMYNGFRLDVTTVVSLLSSFVCPEA---LVQGRLVH 267
++GC D SL NF+R M G+ D TV SLL +C ++ GR +H
Sbjct: 199 ISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLP--MCCDSDGKFDHGRELH 256
Query: 268 SHGIHYGFDL----DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ + G DL DV + ++LI MYS+ + +R +FD + R WTAMI+GY Q
Sbjct: 257 CYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQN 316
Query: 324 GDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G + AL LF M+ + P+ V+++S++ CG L GK ++ D + +
Sbjct: 317 GAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISL 376
Query: 383 CNALIDMYSKCGSIGDARELF-YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
NALIDMY+KCGS+ AR +F K ++W+++I+ L+G+ EAL ++++++
Sbjct: 377 RNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQG 436
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
++P+ +T + VL AC +G +++G ISI P ++ C+ DLLGR G+L
Sbjct: 437 IKPDMITVVGVLSACCRSGLVDEG--ISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLD 494
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
+ALDF++ MPI +WG+LL A IH N + CL +LEP + + Y+ ++N YA
Sbjct: 495 QALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYA 554
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
RWD + +R+MMK ++K PG S I+ K FT D+ H S Y +LD L
Sbjct: 555 SSRRWDEITEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSSSIYEMLDDLV 613
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 221/448 (49%), Gaps = 31/448 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
WNS I V ++ ++LFRQM + + P++ T I+K ++ DL+ ++IH
Sbjct: 95 WNSLINGYVKNHQFDNAIVLFRQMGRC-LLPDDYTLATISKVSGEIQDLVLGKLIHGKSL 153
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL- 126
G+ V S +++C A K+FDEM R+V S+N ++ G A +G L+ L
Sbjct: 154 RIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLY 213
Query: 127 ----RLFYNMRLVGIQADFVTVMGLTQAAIHAK-HLSLLKSVHSFGIHIGVD----ADVS 177
F M+ G AD TV L + + +H + + G+D +DV
Sbjct: 214 ADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVH 273
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ ++ I Y++ + L ++ VF ++ R + W +M+ G + +L +R M
Sbjct: 274 MGSSLIDMYSRSNKLVLSRRVFDQMKS--RNIYVWTAMINGYVQNGAPEGALILFREMQR 331
Query: 238 -NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+ R + ++VS+L + L+ G+ VH+ I F+ +S+ N LI MY+KCG +D
Sbjct: 332 KDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLD 391
Query: 297 SARVLFD-GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
AR +FD G + ++W+++IS Y G EAL ++ M G PD++TV+ ++S C
Sbjct: 392 YARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSAC 451
Query: 356 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS- 413
+SG ++ G +++ +K +V +C ++D+ + G + A + +P S
Sbjct: 452 CRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSV 511
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELD 441
W +++ ++G + + L+EL+
Sbjct: 512 WGSLLTASVIHGNSMTRDLAYRCLLELE 539
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
F + + YR+ L ++ LL + +L + HS + F + +
Sbjct: 7 FSRTTSRYRYHTSAIVSLSPHNLLHLLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTR 66
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LIS Y+ GD ++++FD + + W ++I+GY + D A+ LF M LPD
Sbjct: 67 LISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM-GRCLLPD 125
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T+ ++ G+ L LGK + G +++V N+++ MY +C GDA ++F
Sbjct: 126 DYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFD 185
Query: 405 ALPEKIVVSWTTMIAGCALNGEF 427
+P++ V S+ +I+GCA G
Sbjct: 186 EMPQRNVGSFNVIISGCAALGNL 208
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYS 73
+S I W + I V L+LFR+M++ D I PN ++ + AC L L+
Sbjct: 299 KSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGG 358
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQ 118
+ +H +K F KC LD A ++FD + +D +W++++ +
Sbjct: 359 KQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGL 418
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
G + L +Y M GI+ D +TV+G+ A
Sbjct: 419 HGKGQEALTTYYEMLQQGIKPDMITVVGVLSA 450
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/525 (32%), Positives = 270/525 (51%), Gaps = 50/525 (9%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
++ LK H+ I + + I + +D+ A +F + + +N+M+
Sbjct: 1 MAELKKNHALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDP--NAYLYNAMI 58
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ---------GRLVH 267
CT+ + +++FY+ M+ + + L F P + G+ VH
Sbjct: 59 RACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVH 118
Query: 268 SHGIHYGFDLDVSVINTLISMYSKC-------------------------------GDID 296
+ +G + N LI MY+KC G +
Sbjct: 119 AQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMR 178
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR LFD + +RT VSWTA+ISGY + G +AL +F M+ AG PD +++S++ C
Sbjct: 179 RARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACA 238
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ GALE GKW + GL +CNALI+MY+KCG I A +LF + + V+SW+T
Sbjct: 239 KLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWST 298
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD-- 474
MI G A +G+ EA+ +F ++ + +++PN +TF+ +L AC H GF E+G ++ +D
Sbjct: 299 MIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEG----LMYFDTM 354
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
K PE++HY + DLLGR G+L +ALD V+ MP+K D+ IWG+LL +C+ H NIE+
Sbjct: 355 KKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEV 414
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
L +LEP YV ++N YA G+WD V+ +R +++ ++KK PG SL +N
Sbjct: 415 AVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNN 474
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
F + D S+ + +L+ LA H + + L+ IPE+E
Sbjct: 475 VAQEFVSGDDSKPYSKEIFWLLELLAFHQDMDKHI--LEIIPENE 517
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 166/406 (40%), Gaps = 70/406 (17%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM---------KQNDIEPNNLTFPFIAKACAKLSDLIY 72
+N+ IR + + T+ ++QM ++ I P+ TFPF+ KACA+L
Sbjct: 54 YNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNL 113
Query: 73 SQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWN-------- 110
+ +H K + KCD L A+ +FDEM R SWN
Sbjct: 114 GKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVR 173
Query: 111 -----------------------AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
A++ G+ ++G + L +F M++ GI+ D +++ +
Sbjct: 174 LGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISV 233
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A L K +H F G+ +CN I Y KC + A +F + R R
Sbjct: 234 LPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQM--RGR 291
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA-LVQGRLV 266
V+SW++M+ G K +++ + M + + T V LLS+ C A + L+
Sbjct: 292 DVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSA--CAHAGFWEEGLM 349
Query: 267 HSHGIHYGFDLDVSV--INTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQK 323
+ + F ++ + +L+ + + G + A + + + + W +++S
Sbjct: 350 YFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTH 409
Query: 324 GDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFD 368
+++ A+ AME EL PD ++S +LGKW D
Sbjct: 410 CNIEVAV---IAMEHLEELEPDDTGNYVLLSNI----YADLGKWDD 448
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ TI W + I L +FR+M+ IEP+ + + ACAKL L +
Sbjct: 189 NRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKW 248
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH ++ + KC +D A ++FD+M RDV SW+ M+ G A G
Sbjct: 249 IHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGK 308
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ + +F M+ I+ + +T +GL A HA
Sbjct: 309 VREAIAIFERMKQTNIKPNGITFVGLLSACAHA 341
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
R + W++ I N + + + +F +MKQ +I+PN +TF + ACA
Sbjct: 289 RGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACA 339
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 282/538 (52%), Gaps = 17/538 (3%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
DV SWN+++ A+ G L F +MR + + + +A + K H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
G +D+ V + I Y+ C L+ A VF I +R +VSW SM+ G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR--NIVSWTSMIRGYDLNGN 157
Query: 225 FDDSLNFYRHMMYN------GFRLDVTTVVSLLSSFVCPEALVQG--RLVHSHGIHYGFD 276
D+++ ++ ++ + LD +VS++S+ C +G +HS I GFD
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA--CSRVPAKGLTESIHSFVIKRGFD 215
Query: 277 LDVSVINTLISMYSKCGD--IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
VSV NTL+ Y+K G+ + AR +FD I D+ RVS+ +++S YAQ G +EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 335 AMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ + + +T+ +++ SGAL +GK + GL+D+V+V ++IDMY KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR+ F + K V SWT MIAG ++G +AL+LF +++ +RPN +TF++VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G +GW G+ P L+HY CM DLLGR G L++A D +Q M +K
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGV--EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
D+ IW +LL AC+IH N+E+ E LF+L+ + Y+ +++ YA GRW V +R
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
+MK + K PG SL +NG+ F D H + E Y L L E Y S+
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 228/465 (49%), Gaps = 33/465 (7%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L NR + + WNS I + ++ + LL F M++ + P +FP KAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 65 AKLSDLIYSQMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWN 110
+ L D+ + H V S + C +L+ A K+FDE+ R++ SW
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQAD----FVTVMGLT---QAAIHAKHLSLLKSV 163
+M+ G+ G + + LF ++ LV D F+ MGL A L +S+
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDD--LKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
HSF I G D VSV NT + +YAK + + +A +F I ++ R VS+NS+++
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVYAQ 263
Query: 222 GDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+++ +R ++ N + T+ ++L + AL G+ +H I G + DV
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V ++I MY KCG +++AR FD + ++ SWTAMI+GY G +AL LF AM +G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 341 ELPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ +T +S+++ C +G +E +WF+ G++ + ++D+ + G + A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 400 RELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+L + P+ I+ W++++A C ++ A +L ELD
Sbjct: 444 YDLIQRMKMKPDSII--WSSLLAACRIHKNVELAEISVARLFELD 486
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/620 (30%), Positives = 298/620 (48%), Gaps = 28/620 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK----ACA 65
L+ +R++T W +R L LFR M + P+ +T +
Sbjct: 98 LSSPHRNATT--WTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP 155
Query: 66 KLSDLIYSQMIHGHI-----VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
L + H+ + + K L A ++F EM +D ++NAM++G ++ G
Sbjct: 156 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 215
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L+LF MR GI A T + A HL L VH+ + +V V N
Sbjct: 216 LHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNN 275
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ + Y+KCD L +F + ER VS+N ++A + L +R M GF
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPER--DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
V ++LS + G+ +H+ + G + + N LI MYSKCG +D+A+
Sbjct: 334 DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F +++ +SWTA+I+GY Q G +EAL+LF M AG PD T S+I
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+ LG+ +Y G K +V + L+DMY+KCG + +A F +PE+ +SW +I+
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE---KGWAISIIQYDDKG 477
A GE A+ +F ++ P+ VTFL+VL AC+H G + K + + QY
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQY---- 569
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
S +P +HY+C+ D LGR G + + MP K+D IW ++L +C+IH N E+
Sbjct: 570 -SISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV 628
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A LF +EP A PYV ++N YA G+W+ A ++ +M+ V+K G S I K
Sbjct: 629 AADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIY 688
Query: 598 TFTAEDRYHAESELTYPVLD 617
+F + D LT P++D
Sbjct: 689 SFASND-------LTSPMID 701
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 208/460 (45%), Gaps = 16/460 (3%)
Query: 71 IYSQMIHGHI-----VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++ QM H +I + S + L A +F R+ +W M+ A G +
Sbjct: 65 MFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDA 124
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L LF M G+ D VTV + + S+H F I G+D V VCNT + +
Sbjct: 125 LSLFRAMLGEGVIPDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDA 179
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y K L A VF +E + V++N+M+ GC+ +L + M G
Sbjct: 180 YCKHGLLAAARRVF--LEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHF 237
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L+ L+ G VH+ + L+V V N+L+ YSKC +D R LFD +
Sbjct: 238 TFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEM 297
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+R VS+ +I+ YA LRLF M+ G ++ +M+S G + +GK
Sbjct: 298 PERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGK 357
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
GL ++ NALIDMYSKCG + A+ F EK +SWT +I G NG
Sbjct: 358 QIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG 417
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ EAL LF + LRP+R TF ++++A + + G + Y + Y +
Sbjct: 418 QHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMI--GLGRQLHSYLIRS-GYKSSVF 474
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
S + D+ + G L EAL MP ++ W ++ A
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSIS-WNAVISA 513
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 283/537 (52%), Gaps = 40/537 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A +IF+ + + +N M+ F + G + + LF +R G+ D T + +
Sbjct: 61 ANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGC 120
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + VH+F + G++ D VCN+++ YA+ ++ VF + +R VSWN
Sbjct: 121 IGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDR--DAVSWN 178
Query: 214 SMVAGCTYGDKFDDSLNFYRHM-MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
M++G +F+++++ YR M + + + TVVS LS+ L G+ +H + I
Sbjct: 179 IMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IA 237
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDG-----------------IC---DRTR-- 310
DL + N L+ MY KCG + AR +FD IC D+ R
Sbjct: 238 SELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNL 297
Query: 311 ---------VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
V WTAMI+GY Q +E + LF M+ G PD V+++++GC QSGAL
Sbjct: 298 FERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGAL 357
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E GKW NY +K + +V ALI+MY+KCG I + E+F L EK SWT++I G
Sbjct: 358 EQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGL 417
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A+NG+ EAL+LF + L+P+ +TF+AVL AC+H G +E+G +
Sbjct: 418 AMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGR--KLFHSMSSMYHIE 475
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI---WGTLLCACKIHLNIEIGEYV 538
P L+HY C DLLGR G L+EA + V+ +P +++ I +G LL AC+ + NI++GE +
Sbjct: 476 PNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERL 535
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
A L K++ ++ + +A+ YA RW+ V +R MK +KK PG S ++GK
Sbjct: 536 ATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVDGK 592
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 217/468 (46%), Gaps = 55/468 (11%)
Query: 11 NRIYR---SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
NRI+ ++ +N I+ V + LF+Q++++ + P+N T+P++ K +
Sbjct: 62 NRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCI 121
Query: 68 SDLIYSQMIHGHIVKS-----PFVKCDRLDCAY----------KIFDEMAVRDVASWNAM 112
++ + +H +VK+ P+V C+ Y ++F+EM RD SWN M
Sbjct: 122 GEVREGEKVHAFVVKTGLEFDPYV-CNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIM 180
Query: 113 LVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
+ G+ + E + ++ M + + TV+ A ++L L K +H + I
Sbjct: 181 ISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IASE 239
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVF--------------------CGIEERLRT--- 208
+D + N + Y KC + +A +F CG ++ R
Sbjct: 240 LDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFE 299
Query: 209 ------VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+V W +M+ G ++F++++ + M G + D VV+LL+ AL Q
Sbjct: 300 RSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQ 359
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H++ +D V LI MY+KCG I+ + +F+G+ ++ SWT++I G A
Sbjct: 360 GKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAM 419
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVM 381
G EAL LF AM+ G PD +T ++++S C +G +E G K F + + ++ N+
Sbjct: 420 NGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLE 479
Query: 382 VCNALIDMYSKCGSIGDARELFYALP----EKIVVSWTTMIAGCALNG 425
ID+ + G + +A EL LP E IV + +++ C G
Sbjct: 480 HYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYG 527
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 184/406 (45%), Gaps = 43/406 (10%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWI--SSYAKCDDLKMAELVFCGIEERLRTVVSW 212
K +S LK + + +G+ D N + S + D A +F I + ++ +
Sbjct: 19 KSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDP--SLFIY 76
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N M+ F +++ ++ + +G D T +L C + +G VH+ +
Sbjct: 77 NLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVVK 136
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G + D V N+ + MY++ G ++ +F+ + DR VSW MISGY + +EA+ +
Sbjct: 137 TGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDV 196
Query: 333 FFAM-EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+ M + E P+ TV+S +S C LELGK +Y S L ++ NAL+DMY
Sbjct: 197 YRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIAS-ELDLTTIMGNALLDMYC 255
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE------------------------- 426
KCG + ARE+F A+ K V WT+M+ G + G+
Sbjct: 256 KCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMING 315
Query: 427 ------FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGIS 479
F E + LF ++ ++P++ + +L C +G LE+G W + I D+ I
Sbjct: 316 YVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYI--DENRIK 373
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + + + ++ + G ++++ + + K D W +++C
Sbjct: 374 VDAVVG--TALIEMYAKCGCIEKSFEIFNGLKEK-DTTSWTSIICG 416
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI--SMYSKCGDIDSARVLFD 303
T +SLL S C +++ Q + + +H G D +N L+ SM S GD + A +F+
Sbjct: 10 TYISLLKS--C-KSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFN 66
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
I D + + MI + + G A+ LF + G PD T ++ G G G +
Sbjct: 67 YIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVRE 126
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ + GL+ + VCN+ +DMY++ G + ++F +P++ VSW MI+G
Sbjct: 127 GEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVR 186
Query: 424 NGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
F EA+D++ ++ E + +PN T ++ L AC LE G I
Sbjct: 187 CKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEI 232
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 146/365 (40%), Gaps = 52/365 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN I V + + ++R+M +++ +PN T ACA L +L + IH +I
Sbjct: 177 WNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYI 236
Query: 81 VKS-------------PFVKCDRLDCAYKIFDEMAV------------------------ 103
+ KC + A +IFD M V
Sbjct: 237 ASELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARN 296
Query: 104 -------RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
RD+ W AM+ G+ Q E + LF M++ G++ D V+ L +
Sbjct: 297 LFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGA 356
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +H++ + D V I YAKC ++ + +F G++E+ T SW S++
Sbjct: 357 LEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTT--SWTSII 414
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR-LVHSHGIHYGF 275
G K ++L ++ M G + D T V++LS+ + +GR L HS Y
Sbjct: 415 CGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHI 474
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR----VSWTAMISGYAQKGDLDEALR 331
+ ++ I + + G + A L + + + A++S G++D R
Sbjct: 475 EPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGER 534
Query: 332 LFFAM 336
L A+
Sbjct: 535 LATAL 539
>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 723
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 199/615 (32%), Positives = 311/615 (50%), Gaps = 36/615 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + ++ + L F +++ EPN T + AC L + IHG++
Sbjct: 102 SWNVIVFGLLDHGFEEEGLWWFSKLRVWGFEPNVSTLVLVIHACRSL--WFDGEKIHGYV 159
Query: 81 VKSPFVKCDRLD----CAY---------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++S F + + C Y K+FDEM+ RDV SW+ ++ + Q L
Sbjct: 160 IRSGFWRISSVQNSILCLYSEFDSLSARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLE 219
Query: 128 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISS 185
LF M R + D VTV + +A + + +SVH F I G D DV V N+ I
Sbjct: 220 LFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDM 279
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y+K D A VF E R +VSWNS++AG Y ++D++L +R M D
Sbjct: 280 YSKGYDADSAFRVF--DETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEV 337
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T+VSLL E + + +H I G++ + +++L+ Y+ C +D AR +FD +
Sbjct: 338 TLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSM 397
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ VS + MISG + G DEA+ +F M + P+ +TV+S++S C S L K
Sbjct: 398 SYKDVVSCSTMISGLGRCGRSDEAISIFCQMR---DKPNAITVISLLSACSVSAVLRTSK 454
Query: 366 WFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
W A GL N + V +++D Y+KCG+I AR F + EK +VSWT +I+ A+N
Sbjct: 455 WAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAIN 514
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNP 482
G +AL F ++ PN VT+LA L AC H G ++KG I S+++ D K P
Sbjct: 515 GLPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQK-----P 569
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHLN--IEIGEYV 538
L HYSC+ D+L R G++ A++ ++++P +K+ A WG +L C+ L I E V
Sbjct: 570 SLQHYSCIVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILSGCRNRLKSGIITSEVV 629
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +LEP ++ Y+ ++ +A W VA +R ++K V+ G S+
Sbjct: 630 AEVL-ELEPLCSSGYLLASSVFAAEKSWVDVAMMRRLVKERNVRVVAGYSMVLEGSIARK 688
Query: 599 FTAEDRY-HAESELT 612
F A D+ H++SEL
Sbjct: 689 FLAGDKLNHSDSELN 703
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 225/460 (48%), Gaps = 19/460 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNN-LTFPFIAKACAKLSDLIY--- 72
S + +S+I++A + + + + +++ I+ N+ FP + KACAKLS L+
Sbjct: 7 SKLQALSSKIKQASVNGKWREVVSGYSEIQSAGIQFNDPFVFPIVFKACAKLSWLLQGFE 66
Query: 73 SQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM 132
S + G+ + ++KC L + FD M RD SWN ++ G GF E L F +
Sbjct: 67 SYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFSKL 126
Query: 133 RLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
R+ G + + T++ IHA + +H + I G SV N+ + Y++ D
Sbjct: 127 RVWGFEPNVSTLV----LVIHACRSLWFDGEKIHGYVIRSGFWRISSVQNSILCLYSEFD 182
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVS 249
L +L F + E R V+SW+ ++ + L ++ M+ D TV S
Sbjct: 183 SLSARKL-FDEMSE--RDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTVTS 239
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGICDR 308
+L + + + GR VH I GFDL DV V N+LI MYSK D DSA +FD R
Sbjct: 240 VLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAFRVFDETTCR 299
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
VSW ++++G+ DEAL +F M+ D VT++S++ C K
Sbjct: 300 NIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFEHPLPCKSIH 359
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
G + N + ++L+D Y+ C + DAR +F ++ K VVS +TMI+G G
Sbjct: 360 GVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGRCGRSD 419
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WA 467
EA+ +F Q+ + +PN +T +++L AC+ + L WA
Sbjct: 420 EAISIFCQMRD---KPNAITVISLLSACSVSAVLRTSKWA 456
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 325/645 (50%), Gaps = 44/645 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKAC--A 65
RL R + + WN+ I + A + L LFR M + P N++TF + +C A
Sbjct: 67 RLPRASKRDVVT-WNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEA 125
Query: 66 KLSDLIYSQMIHGHIV-----KSPFV---------KCDRLDCAYKIF----DEMAVRDVA 107
L L + IHG IV + FV K LD A+++F DE +
Sbjct: 126 GLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLV 185
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+ +AM+ Q G+ + LRLFY M L G + VT++ + ++A + + S +F
Sbjct: 186 TCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSV----LNACSMLPVGSATAFV 241
Query: 168 IH-----IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+ + D + T +++YA+ +DL A F I+ VVSWN+M A
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSP--DVVSWNAMAAAYLQH 299
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS---FVCPEALVQGRLVHSHGIHYGFDLDV 279
+ ++L + M+ G R V T ++ L++ + A G+ + S G + D
Sbjct: 300 HRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDT 359
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAME 337
+V N ++MY+KCG + AR +F+ I R ++W +M++ Y G EA LF AME
Sbjct: 360 AVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAME 419
Query: 338 AAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
A + P+ VT ++++ ++ G+ S G + + ++ NAL++MY+KCGS+
Sbjct: 420 AEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSL 479
Query: 397 GDARELF--YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
DA+ +F + ++ V++WT+++AG A G+ AL LF + + +RPN +TF++ L
Sbjct: 480 DDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALT 539
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC H G LE+G + D GI P H+SC+ DLLGR G+L EA ++ ++
Sbjct: 540 ACNHGGKLEQGCELLSGMTPDHGIV--PASKHFSCIVDLLGRCGRLDEAEKLLERTS-QA 596
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
D W LL ACK +E GE A + +L+P A+ Y+ +A+ YA GRW+ A IR
Sbjct: 597 DVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRK 656
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
M ++ PG S +N + +F+A D+ H +SE Y L+ L
Sbjct: 657 TMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERL 701
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 212/450 (47%), Gaps = 31/450 (6%)
Query: 49 DIEPNNLTFPFIAKACAKLSDLIYSQMIH--------------GHIVKSPFVKCDRLDCA 94
++ PN + AC+ L +L + IH G+ + S + KC L A
Sbjct: 2 EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61
Query: 95 YKIFDEM---AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI-QADFVTVMGLTQA 150
+ FD + + RDV +WNAM+ F + G L+LF +M G + VT + + +
Sbjct: 62 KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121
Query: 151 AIHAKHLSL--LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC--GIEERL 206
+ A LSL ++++H + G++ + V + SY K L A VF EE
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS-FVCPEALVQGRL 265
++V+ ++M++ C +SL + M G + T+VS+L++ + P +
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+ D + TL++ Y++ D+ AR FD I VSW AM + Y Q
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCG---QSGALELGKWFDNYACSGGLKDNVMV 382
EAL LF M G P + T ++ ++ C A +GK + GL+ + V
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361
Query: 383 CNALIDMYSKCGSIGDARELFYALP--EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
NA ++MY+KCGS+ DAR +F + + ++W +M+A +G EA +LF Q ME
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELF-QAMEA 420
Query: 441 D--LRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ ++PN+VTF+AVL A T + +G I
Sbjct: 421 EKLVKPNKVTFVAVLDASTSRTSIAQGREI 450
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 196/641 (30%), Positives = 314/641 (48%), Gaps = 46/641 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + + + + LF +M+ I PN TF + A A L Q +H V
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 82 K-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE-NVL 126
K S FV KC ++ A +F+ M RD+ SWN ++ G Q+ E L
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL-QLNECELEAL 287
Query: 127 RLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+LF+ R Q+ + TV+ L + K L+L + +HS + G +V
Sbjct: 288 QLFHESRATMGKMTQSTYATVIKLCA---NLKQLALARQLHSCVLKHGFHLTGNVMTALA 344
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM-----MYN 238
+Y+KC +L A +F + R VVSW ++++GC ++ + M M N
Sbjct: 345 DAYSKCGELADALNIF-SMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
F SL S + P+ +H+ I + SV L++ YSK G + A
Sbjct: 404 EFTYSAMLKASL--SILPPQ-------IHAQVIKTNYQHIPSVGTALLASYSKFGSTEDA 454
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG-Q 357
+F I + V+W+AM+S +AQ GD + A LF M G P+ T+ S+I C
Sbjct: 455 LSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACP 514
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
S ++ G+ F + D + V +AL+ MYS+ G+I A+ +F ++ +VSW +M
Sbjct: 515 SAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSM 574
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+G A +G ++A++ F Q+ ++ + VTFLAV+ CTH G + +G QY D
Sbjct: 575 ISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQ-----QYFDSM 629
Query: 478 I---SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+ NP ++HY+CM DL R GKL E + ++ MP + A +W TLL AC++H N+E+
Sbjct: 630 VRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVEL 689
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G++ A L LEPH ++ YV ++N YA G+W +R +M +VKK G S I
Sbjct: 690 GKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKN 749
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
K +F A D+ H S+ Y L + +++ YS + ++
Sbjct: 750 KVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFV 790
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 231/518 (44%), Gaps = 30/518 (5%)
Query: 7 PP----RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
PP L+ I R N + + + + L F ++ + ++ T + K
Sbjct: 48 PPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLK 107
Query: 63 ACAKLSDLIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDVA 107
AC + D + + +H VK ++KC + ++F+ M ++V
Sbjct: 108 ACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVV 167
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+W ++L G A V+ LF+ MR GI + T + A L L + VH+
Sbjct: 168 TWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQS 227
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+ G + V VCN+ ++ YAKC ++ A+ VF +E R +VSWN+++AG + +
Sbjct: 228 VKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMET--RDMVSWNTLMAGLQLNECELE 285
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+L + ++ +T +++ + L R +HS + +GF L +V+ L
Sbjct: 286 ALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALAD 345
Query: 288 MYSKCGDIDSARVLFDGIC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
YSKCG++ A +F R VSWTA+ISG Q GD+ A+ LF M +P+
Sbjct: 346 AYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEF 405
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T +M+ ++ L + V AL+ YSK GS DA +F +
Sbjct: 406 TYSAML----KASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMI 461
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT-HTGFLEKG 465
+K VV+W+ M++ A G+ A LF+++ ++PN T +V+ AC + +++G
Sbjct: 462 EQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQG 521
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
I + Y+ + S + + RKG + A
Sbjct: 522 RQFHAISIKYR---YHDAICVSSALVSMYSRKGNIDSA 556
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 145/291 (49%), Gaps = 8/291 (2%)
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDS 297
G +D T+ +L + V G +H + G D +VS +L+ MY KCG +
Sbjct: 94 GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
+F+G+ + V+WT++++G A E + LFF M A G P+ T S++S
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVAS 213
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
GAL+LG+ + G + +V VCN+L++MY+KCG + DA+ +F + + +VSW T+
Sbjct: 214 QGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTL 273
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDD 475
+AG LN +EAL LFH+ + + T+ V++ C + L + ++++
Sbjct: 274 MAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKH-- 331
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
++ + + +AD + G+L +AL+ + W ++ C
Sbjct: 332 ---GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 137/308 (44%), Gaps = 32/308 (10%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC-AKLSDLIYSQ 74
S + W + I + + ++LF +M+++ + PN T+ + KA + L I++Q
Sbjct: 366 SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQ 425
Query: 75 MIH---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+I G + + + K + A IF + +DV +W+AML AQ G E
Sbjct: 426 VIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGA 485
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
LF M + GI+ + T+ + A A + + + H+ I + V + +S
Sbjct: 486 TYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVS 545
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y++ ++ A++VF + R +VSWNSM++G ++ +R M +G ++D
Sbjct: 546 MYSRKGNIDSAQIVF--ERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDG 603
Query: 245 TTVVSLLSSFVCPEALVQGR-----LVHSHGI-----HYGFDLDVSVINTLISMYSKCGD 294
T ++++ +V+G+ +V H I HY ++ +YS+ G
Sbjct: 604 VTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA---------CMVDLYSRAGK 654
Query: 295 IDSARVLF 302
+D L
Sbjct: 655 LDETMSLI 662
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/594 (30%), Positives = 303/594 (51%), Gaps = 23/594 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI S ++ W + N+A L +F++M+ + +E NN T + AC + S
Sbjct: 308 FSRIPNPSVVS-WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMA-VRDVASWNAMLV 114
+ + +H + KS F K +D + ++F+++ ++ N M+
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMIT 426
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
F+Q +RLF M G++ D +V L L+L K VH + + G+
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVL 483
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D++V ++ + Y+KC L+ + +F GI + W SM++G +++ +
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIP--FKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ +G D +T+ ++L+ +L +G+ +H + + G D + + + L++MYSKCG
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ AR ++D + + VS +++ISGY+Q G + + LF M +G D + S++
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
S LG Y GL V ++L+ MYSK GSI D + F + +++W
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
T +IA A +G+ EAL +++ + E +P++VTF+ VL AC+H G +E+ +
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK 781
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D GI PE HY CM D LGR G+L+EA F+ +M IK DA +WGTLL ACKIH +E+
Sbjct: 782 DYGI--EPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
G+ A +LEP A Y+ ++N A G WD V R +MK V+K PG S
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 222/460 (48%), Gaps = 20/460 (4%)
Query: 12 RIYR---SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+++R S+ + WN+ I A+ LF +M +P++ T+ + ACA L
Sbjct: 206 KVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLE 265
Query: 69 DLIYSQMIHGHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +++ ++K + KC + A ++F + V SW ML G
Sbjct: 266 KLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ + + L +F MR G++ + TV + A + VH++ G D
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
SV IS Y+K D+ ++E VF +++ R + N M+ + K ++ + M
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRM 444
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G R D +V SLLS C L G+ VH + + G LD++V ++L ++YSKCG +
Sbjct: 445 LQEGLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ + LF GI + W +MISG+ + G L EA+ LF M G PD T+ ++++ C
Sbjct: 502 EESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVC 561
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+L GK Y G+ + + +AL++MYSKCGS+ AR+++ LPE VS +
Sbjct: 562 SSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCS 621
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
++I+G + +G + LF ++ + ++L+A
Sbjct: 622 SLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 232/495 (46%), Gaps = 32/495 (6%)
Query: 36 HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK------------- 82
++L F +M E N +++ + AC+ L ++S+++ H +K
Sbjct: 132 EESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESAL 191
Query: 83 -SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ-AD 140
F K R + AYK+F + +V WN ++ G + V LF+ M VG Q D
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPD 250
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T + A + L K V + I G + DV VC + YAKC + A VF
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
I +VVSW M++G T + +L ++ M ++G ++ TV S++S+ P +
Sbjct: 310 RIPN--PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW-TAMISG 319
+ VH+ GF LD SV LISMYSK GDID + +F+ + D R + MI+
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS 427
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
++Q +A+RLF M G D +V S++S L LGK Y GL +
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLD 484
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V ++L +YSKCGS+ ++ +LF +P K W +MI+G G EA+ LF ++++
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAI---SIIQYDDKGISYNPELDHYSCMADLLGR 496
P+ T AVL C+ L +G I ++ DKG +D S + ++ +
Sbjct: 545 DGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG------MDLGSALVNMYSK 598
Query: 497 KGKLKEALDFVQSMP 511
G LK A +P
Sbjct: 599 CGSLKLARQVYDRLP 613
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 198/438 (45%), Gaps = 25/438 (5%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA--A 151
A K+FD + DV S N M+ G+ Q E LR F M +G +A+ ++ + A A
Sbjct: 103 AAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSA 162
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+ A S L H+ I +G V + I ++K + A VF + V
Sbjct: 163 LQAPLFSELVCCHT--IKMGYFFYEVVESALIDVFSKNLRFEDAYKVF--RDSLSANVYC 218
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+++AG + + + M + D T S+L++ E L G++V + I
Sbjct: 219 WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI 278
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
G + DV V ++ +Y+KCG + A +F I + + VSWT M+SGY + D AL
Sbjct: 279 KCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE 337
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+F M +G + TV S+IS CG+ + + G + V ALI MYS
Sbjct: 338 IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYS 397
Query: 392 KCGSIGDARELFYALP----EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
K G I + ++F L + IV MI + + + +A+ LF ++++ LR +
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIV---NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEF 454
Query: 448 TFLAVLQA--CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+ ++L C + G G+ + G+ +L S + L + G L+E+
Sbjct: 455 SVCSLLSVLDCLNLGKQVHGYTL------KSGLVL--DLTVGSSLFTLYSKCGSLEESYK 506
Query: 506 FVQSMPIKSDAGIWGTLL 523
Q +P K +A W +++
Sbjct: 507 LFQGIPFKDNA-CWASMI 523
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 3/282 (1%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
DV + + +S Y+ + A +F I + VVS N M++G F++SL F+
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQP--DVVSCNIMISGYKQHRLFEESLRFFSK 140
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M + GF + + S++S+ +A + LV H I G+ V + LI ++SK
Sbjct: 141 MHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ A +F W +I+G + + LF M + PD T S+++
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C L GK G +D V VC A++D+Y+KCG + +A E+F +P VVSW
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
T M++G + + AL++F ++ + N T +V+ AC
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 17/258 (6%)
Query: 264 RLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
+++ +H + Y DV + +L+S YS G + A LFD I VS MISGY Q
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV-- 380
+E+LR F M G + ++ S+IS C AL+ F C +K
Sbjct: 128 HRLFEESLRFFSKMHFLGFEANEISYGSVISAC---SALQ-APLFSELVCCHTIKMGYFF 183
Query: 381 --MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V +ALID++SK DA ++F V W T+IAG N + DLFH++
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGR 496
+P+ T+ +VL AC LEK ++Q + I E D + C A DL +
Sbjct: 244 VGFQKPDSYTYSSVLAACAS---LEKLRFGKVVQ--ARVIKCGAE-DVFVCTAIVDLYAK 297
Query: 497 KGKLKEALDFVQSMPIKS 514
G + EA++ +P S
Sbjct: 298 CGHMAEAMEVFSRIPNPS 315
>gi|125562361|gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
Length = 642
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 243/438 (55%), Gaps = 7/438 (1%)
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
AA L + H+ + + + +D V N I+ Y+ C+ A LV V
Sbjct: 14 AAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDV 73
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
VSWN+++AG G + +L + M RLD T++++L + A+ G L H+
Sbjct: 74 VSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHAL 133
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ GF+++ + ++L+SMY+KCG ++ AR +F+ + +R V WT+MI+G Q G EA
Sbjct: 134 VVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEA 193
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
+ LF M+ AG D T+ +++S CGQ GAL+LG++ Y GL + V N+LIDM
Sbjct: 194 VDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDM 253
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVT 448
YSKCG + A ++F L ++ V +WT MI G A+NG VEALDLF Q+ D + PN V
Sbjct: 254 YSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVI 313
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDF 506
FL VL AC+H G +E+G+ + YN P ++HY CM DLLGR L EA F
Sbjct: 314 FLGVLTACSHGGLVEQGYH----HFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQF 369
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
++ MP+ D +W +LL AC+ + + EY A + +LEP +V ++N YA RW
Sbjct: 370 IKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTSRW 429
Query: 567 DGVANIRTMMKRNQVKKF 584
V N+RT M ++ +
Sbjct: 430 VDVNNVRTGMGNSRTSQI 447
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S + WN+ I + +K L F QM + + + +T + ACA+ + +
Sbjct: 70 ASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSL 129
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
H +V + F KC ++ A ++F+ M R+V W +M+ G Q G
Sbjct: 130 CHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGR 189
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ + LF +M++ G++AD T+ + + L L + +H++ G+ ++SV N+
Sbjct: 190 FKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNS 249
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
I Y+KC D+ A +F G+ + R V +W M+ G ++L+ + M
Sbjct: 250 LIDMYSKCGDVNKAYQIFRGLTK--RDVFTWTVMIMGFAMNGLCVEALDLFAQM 301
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 34/224 (15%)
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE--K 409
IS + +L++G F + L + V NALI+MYS C AR + + P
Sbjct: 12 ISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWAS 71
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE------ 463
VVSW T+IAG G +AL FHQ+ + +R + VT L VL AC TG ++
Sbjct: 72 DVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCH 131
Query: 464 -----KGWAIS---------------IIQYDDKGISYNPELDHYSCMADLLG--RKGKLK 501
G+ I+ +++ + + PE + + + G + G+ K
Sbjct: 132 ALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFK 191
Query: 502 EALDFVQSMPI---KSDAGIWGTLLCACKIHLNIEIGEYV-AYC 541
EA+D + M I K+D T++ +C +++G Y+ AYC
Sbjct: 192 EAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYC 235
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/591 (31%), Positives = 296/591 (50%), Gaps = 22/591 (3%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKI 97
T L +K ++ L F I L Y++MI G + + DRL A K+
Sbjct: 16 TTSLANHLKNQRLDQARLIFDKIPSPNLHL----YTKMIAG------YTRNDRLCDALKL 65
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
FD M+VRDV SWN+M+ G G L RLF M + + ++ + + +
Sbjct: 66 FDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP----EKNVISWTTMVNGYLKFGRV 121
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
L + + +H+ DV+ N + Y ++ ++ E V E +R V+SW SM+
Sbjct: 122 ELAQRLF-LDMHV---KDVAAWNAMVHGYF--ENGRVEEGVRLFEEMPVRDVISWTSMIG 175
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G K +++L ++ M+ +G +T +LS+ G VH H + G
Sbjct: 176 GLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFF 235
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+ +LI+ Y+ C I+ A +F+ + V WTA+++ Y +ALR+F M
Sbjct: 236 HEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMT 295
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G LP+ T + C AL+ GK A GL+ +V V N+L+ MY++CG++
Sbjct: 296 KMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVN 355
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A +F + EK +VSW ++I G A +G + AL F+Q++ + PN +TF +L AC+
Sbjct: 356 SAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACS 415
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
+G L KG +Y + S HY+CM D+LGR GKL EA + V+ MP+K+++
Sbjct: 416 RSGMLLKGRC--FFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSM 473
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK 577
IW LL AC++H N+E+ E A + LEP+ ++ YV ++N YA GRW V+ +R MK
Sbjct: 474 IWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMK 533
Query: 578 RNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ + K PG S + GK F + DR H SE Y LD L +E Y
Sbjct: 534 QGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGY 584
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 147/326 (45%), Gaps = 18/326 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I ++ + L +F++M ++ +EP TF + ACA + +HGH+V
Sbjct: 170 WTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVV 229
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + C +++ A+KIF+E ++V W A+L + ++ LR
Sbjct: 230 KLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALR 289
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F +M +G + T +A + L K +H+ I +G++ DV V N+ + Y
Sbjct: 290 VFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYT 349
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C ++ A VF I E + +VSWNS++ G +L F+ M+ G + T
Sbjct: 350 ECGNVNSAVAVFRNINE--KDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITF 407
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFD-LDVSVINTLISMYSKCGDIDSARVLFDGI- 305
LLS+ L++GR + Y + L ++ + +CG +D A L +
Sbjct: 408 TGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMP 467
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALR 331
+ W A++S +L+ A R
Sbjct: 468 VKANSMIWLALLSACRVHSNLEVAER 493
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+ + +W + + V N+ L +F M + PN TF KAC L L +
Sbjct: 265 TKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKE 324
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH +K + +C ++ A +F + +D+ SWN+++VG AQ GF
Sbjct: 325 IHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGF 384
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L F M G+ + +T GL A
Sbjct: 385 GLWALIFFNQMIRRGVDPNEITFTGLLSA 413
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/582 (30%), Positives = 299/582 (51%), Gaps = 26/582 (4%)
Query: 24 SQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS 83
S+I + E L L + + +I + + + + C K+ + IH H++KS
Sbjct: 88 SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 147
Query: 84 P-----FVKCDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
FV L +K +FD + V+DV SW +M+ G+ ++G N L L
Sbjct: 148 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 207
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F+ M G++ + T+ + +A L L + H + G D++ + + I + +
Sbjct: 208 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR 267
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTV 247
L A +F + E + W S+++ T D FD++L F+ M + G D T
Sbjct: 268 NCALDDARQLFDELLEP--DAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTF 325
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++L++ L QG+ VH+ I GF +V V ++L+ MY KCG + ++ +FD +
Sbjct: 326 GTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPI 385
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW+A++ GY Q GD +++F ME DL +++ C A+ GK
Sbjct: 386 KNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEV 441
Query: 368 D-NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y GG +D V+V +AL+D+Y+KCG I A+ +F +P + +++W +MI G A NG
Sbjct: 442 HCQYIRKGGWRD-VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGR 500
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EAL +F+Q+++ ++P+ ++F+ +L AC+H G +++G I D GI ++H
Sbjct: 501 GEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVG--IEH 558
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DLLGR G L+EA +++ + D+ +W LL AC N EI E +A + +LE
Sbjct: 559 YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 618
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
P YV +AN Y GRW+ IR +MK V K PG+S
Sbjct: 619 PDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKS 660
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 209/438 (47%), Gaps = 25/438 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
W S I V + +L LF +M +EPN T + KAC++L DL ++ HG
Sbjct: 188 WTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVL 247
Query: 79 -------HIVKSPFVKCDRLDCAY----KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+++ S + +CA ++FDE+ D W +++ + F + LR
Sbjct: 248 GRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALR 307
Query: 128 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
FY+M R G+ D T + A + L K VH+ I G +V V ++ + Y
Sbjct: 308 FFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMY 367
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC + ++ +F + ++ VSW++++ G C GD F + +R M ++D+
Sbjct: 368 GKCGSVGESQRIFDRMP--IKNSVSWSALLGGYCQNGD-FKSVIQIFRKME----KVDLY 420
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
++L + A+ QG+ VH I G DV V + L+ +Y+KCG I+ A+ +FD +
Sbjct: 421 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 480
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R ++W +MI G+AQ G +EALR+F M G PD ++ + ++ C G ++ G+
Sbjct: 481 PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGR 540
Query: 366 -WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCAL 423
+F + G+K + + ++D+ + G + +A L + S W ++ C
Sbjct: 541 EYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTT 600
Query: 424 NGEFVEALDLFHQLMELD 441
+ A + ++MEL+
Sbjct: 601 CTNYEIAERIAKRVMELE 618
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 287/563 (50%), Gaps = 32/563 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
WN+ + + + L RQM+ P+++TF I +C++ + L
Sbjct: 380 WNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTD 439
Query: 71 ---IYSQMIH---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++SQMI G+++ + +C LD A F + R+V SW ++ Q
Sbjct: 440 GRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQ 499
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G L L +M L G +A+ +T + L A LSL K++H G+++D+
Sbjct: 500 NGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIIT 559
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
N ++ Y C+ L A LVF ER+ R VVSW +++ + ++L YR M
Sbjct: 560 SNALLNMYTTCESLDEARLVF----ERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRME 615
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
R D T++S+L + ALV+G+ +H + G + DV V ++S Y KC ++
Sbjct: 616 QEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVE 675
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR +FD I D+ V W AMI YAQ ++A L+ M P+ VT+++++ C
Sbjct: 676 DARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCS 735
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK-CGSIGDARELFYALPEKIVVSWT 415
+ +E G A + G + V NALI+MY+K CG++ A+ F ++ K VVSW+
Sbjct: 736 STCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWS 795
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+++A A NGE A +LF + + + PN VTF +VL AC+H G ++GW+ + D
Sbjct: 796 SIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGD 855
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
+ PE HY CM +LL + G++K+A F+ +MP++ DA W +LL AC++H + E G
Sbjct: 856 HHLEPTPE--HYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYG 913
Query: 536 EYVAYCLFKLEPHSAAPYVEMAN 558
A L EP ++A YV + N
Sbjct: 914 ALAAKQLLDAEPRNSAAYVLLYN 936
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 233/477 (48%), Gaps = 29/477 (6%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
RI R S I+ W++ I EA KT F M ++PN T + +ACA +
Sbjct: 273 RISRPSVIS-WSAFIAAYGQHWEAIKT---FELMNLEGVKPNATTLTSVLRACATVGAHE 328
Query: 72 YSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ IH ++ P+ KC R+ A ++F + +D SWNA++ +A
Sbjct: 329 QGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYA 388
Query: 118 QMGFLENVLRLFYNMRLVGIQAD---FVTVM-GLTQAAI-----HAKHLSLLKSVHSFGI 168
+ G + + L M++ G D F+T++ +Q+A+ ++K L+ + VHS I
Sbjct: 389 KQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMI 448
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
G+D D + N + Y +C L A F GI +R V SW +++ + +
Sbjct: 449 SNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQR--NVFSWTILISLLVQNGEASEG 506
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
L + M G + T +SLL + L G+ +H G + D+ N L++M
Sbjct: 507 LELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNM 566
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y+ C +D AR++F+ + R VSWT +IS YA G EAL+L+ ME PD VT+
Sbjct: 567 YTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTL 626
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
+S++ C AL GK + G++ +V V A++ Y KC ++ DAR++F + +
Sbjct: 627 ISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILD 686
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
K +V W MI A N +A L+ +++E + PN VT + +L +C+ T +E+G
Sbjct: 687 KDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERG 743
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 220/471 (46%), Gaps = 29/471 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W + I + + +M Q + N +TF + C+ L L + +H
Sbjct: 180 WTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLAL 239
Query: 78 ----------GHIVKSPFVKCDR-LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ + S + KC R D A ++F ++ V SW+A + + Q +
Sbjct: 240 GSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAI 296
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ F M L G++ + T+ + +A + +H+ + + +V N S Y
Sbjct: 297 KTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLY 356
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC + A VF I + VSWN++V+ F D++ R M GF D T
Sbjct: 357 AKCSRVADASRVFSSIP--CKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDIT 414
Query: 247 VVS---------LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
++ LL + ++L GR VHS I G D D + N L+ MY +CG +D
Sbjct: 415 FITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDD 474
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
AR F GI R SWT +IS Q G+ E L L +M+ G + +T +S++ C
Sbjct: 475 ARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSV 534
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+G L LGK + GL+ +++ NAL++MY+ C S+ +AR +F + + VVSWT +
Sbjct: 535 TGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTII 594
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
I+ A G +EAL L+ ++ + RP+ VT ++VL+AC L +G AI
Sbjct: 595 ISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAI 645
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 222/481 (46%), Gaps = 28/481 (5%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDR 90
M + + +T ACA L D + + IH I+ S + KC
Sbjct: 1 MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
++ A FD M RD+ SWNAM+ +AQ + ++L+ RL G + D VT L A
Sbjct: 61 VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT-V 209
+ L + +H + +D VCN IS Y+ C L A VF E R V
Sbjct: 121 CFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVF---EWSFRPDV 177
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+W +++A T K + + + M G R + T +++L + E L G+ VH
Sbjct: 178 CTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRL 237
Query: 270 GIHYGFDLDVSVINTLISMYSKCG-DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ G D + + N+LISMY KC D AR +F I + +SW+A I+ Y Q E
Sbjct: 238 ALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---E 294
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
A++ F M G P+ T+ S++ C GA E G+ +G N V NA
Sbjct: 295 AIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAAS 354
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
+Y+KC + DA +F ++P K VSW +++ A G F +A+ L Q+ P+ +T
Sbjct: 355 LYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDIT 414
Query: 449 FLAVLQACTHTGFLEK-GWAISII---QYDDKGISYNPELDHY--SCMADLLGRKGKLKE 502
F+ +L +C+ + L++ G + S+ Q + IS + D Y + + + GR G L +
Sbjct: 415 FITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDD 474
Query: 503 A 503
A
Sbjct: 475 A 475
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 224/471 (47%), Gaps = 29/471 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + L+ + +P+ +TF + AC DL + +M+H H +
Sbjct: 79 WNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFL 138
Query: 82 KSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ FV C LD A +F+ DV +W ++ + + G LE
Sbjct: 139 GTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFA 198
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M G++++ +T + + + L K VH + G+D + + N+ IS Y
Sbjct: 199 TWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYG 258
Query: 188 KCD-DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC A VF I +V+SW++ +A YG + +++ + M G + + TT
Sbjct: 259 KCSRHPDEAREVFLRISR--PSVISWSAFIAA--YGQHW-EAIKTFELMNLEGVKPNATT 313
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S+L + A QGR +H+ + + + +V+N S+Y+KC + A +F I
Sbjct: 314 LTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIP 373
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL--- 363
+ VSW A++S YA++G +A+ L M+ G +PD +T ++++ C QS L+
Sbjct: 374 CKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGN 433
Query: 364 ------GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G+ + S GL + + N L+ MY +CGS+ DAR F + ++ V SWT +
Sbjct: 434 SKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTIL 493
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
I+ NGE E L+L + N++TF+++L AC+ TG L G I
Sbjct: 494 ISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTI 544
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 286/569 (50%), Gaps = 20/569 (3%)
Query: 62 KACAKLSDL--IYSQMIHGHIVKSPFVKCD-----------RLDCAYKIFDEMAVRDVAS 108
+ C +S L I++QM+ + PF L A +F+++ +
Sbjct: 48 EKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFT 107
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
N+++ G+ + + M L G+ D T L ++ L K +H
Sbjct: 108 CNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHST 164
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
+G +D + NT ++ Y+ C L A VF + + +VVSW +M+ D ++
Sbjct: 165 KLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK--SVVSWATMIGAYAQWDLPHEA 222
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
+ +R M + + T+V++L++ L + VH + G + + L+ +
Sbjct: 223 IKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDV 282
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y KCG AR LF+ + ++ W MI+G+ + D +EAL LF M+ +G D VT+
Sbjct: 283 YCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTM 342
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
S++ C GALELGKW Y ++ +V + AL+DMY+KCGSI A +F +PE
Sbjct: 343 ASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE 402
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
K V++WT +I G A+ G+ ++AL+LFH++ +++P+ +TF+ VL AC+H G + +G A
Sbjct: 403 KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAY 462
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
+ GI P ++HY CM D+LGR G++ EA D +Q+MP+ D + LL AC+I
Sbjct: 463 FNSMPNKYGI--QPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRI 520
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
H N+ + E A L +L+P + YV ++N Y+ W+ +R +M +KK PG S
Sbjct: 521 HGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCS 580
Query: 589 LFHINGKTCTFTAEDRYHAESELTYPVLD 617
+ G F D H +S Y LD
Sbjct: 581 AIEVGGVVHEFVKGDVSHPQSSEIYETLD 609
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 215/450 (47%), Gaps = 22/450 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N+I +T NS IR NKN + +L ++ M ++P+ TFP + K+C L +
Sbjct: 97 FNQIPNPTTFT-CNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE 155
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ +H H K F C L A K+FD+M + V SW M+
Sbjct: 156 ---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 212
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+AQ ++LF M + ++ + +T++ + A ++ L K VH + G+
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ + + Y KC +A +F + E + + WN M+ G ++++L+ + M
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMPE--KNLFCWNIMINGHVEDSDYEEALSLFNEM 330
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+G + D T+ SLL + AL G+ +H + ++DV++ L+ MY+KCG I
Sbjct: 331 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 390
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+SA +F + ++ ++WTA+I G A G +AL LF M+ + PD +T + +++ C
Sbjct: 391 ESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 450
Query: 356 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVS 413
+G + G +F++ G++ ++ ++DM + G I +A +L +P
Sbjct: 451 SHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 510
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+++ C ++G V A QL+ELD +
Sbjct: 511 LVGLLSACRIHGNLVVAERAAQQLIELDPK 540
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 225/392 (57%), Gaps = 35/392 (8%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVI-------------------------------NTLIS 287
+L+ G+++H+H I GFD DV + N+LI+
Sbjct: 25 SLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIA 84
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLV 346
YS+ GD++ A LF + R+ VSWT MISGY+Q G +AL +F ME E+ P+ V
Sbjct: 85 GYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEV 144
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T+ S+ S C + GALE+G+ ++YA GL N+ V N L++MY++CG I AR +F +
Sbjct: 145 TIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEI 204
Query: 407 PEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
++ + SW +M+ G A++G EAL L+ Q++ + P+ VTF+ ++ ACTH G + KG
Sbjct: 205 GKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKG 264
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
W + Q + S P+L+HY CM DLLGR G+L+EA D V+SMP+K D+ IWGTLL A
Sbjct: 265 W--QLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGA 322
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C H N+E E A LF++EP + YV + N YA RWDGVA +R +MK Q+ K
Sbjct: 323 CSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGVAKLRKLMKGGQITKAA 382
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
G S+ G+ F ED+ H Y +L+
Sbjct: 383 GYSVIEGEGEIHKFIVEDKSHPRHYEIYALLN 414
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 144/315 (45%), Gaps = 41/315 (13%)
Query: 154 AKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
A SLL K +H+ I G D DV + YAK L +A VF E +R + +
Sbjct: 21 ASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFD--EMTVRDIPT 78
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHM----------MYNGF--------------------- 240
WNS++AG + + +L ++ M M +G+
Sbjct: 79 WNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKE 138
Query: 241 -RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
R + T+ S+ S+ AL G + S+ G ++ V NTL+ MY++CG ID+AR
Sbjct: 139 VRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAAR 198
Query: 300 VLFDGICDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F+ I R + SW +M+ G A G +EAL+L+ M G PD VT + +I C
Sbjct: 199 HVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHG 258
Query: 359 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTT 416
G + G + F + + + + ++D+ + G + +A +L ++P K V W T
Sbjct: 259 GLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGT 318
Query: 417 MIAGCAL--NGEFVE 429
++ C+ N EF E
Sbjct: 319 LLGACSFHSNVEFAE 333
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 48/294 (16%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKI 97
PN LTF F+ ACA L++ ++IH H +KS F K L A ++
Sbjct: 8 PNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQV 67
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
FDEM VRD+ +WN+++ G+++ G +E L LF M + + + G +Q ++ K L
Sbjct: 68 FDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKAL 127
Query: 158 SLL--------------------------------KSVHSFGIHIGVDADVSVCNTWISS 185
+ + + S+ G+ ++ V NT +
Sbjct: 128 EMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEM 187
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YA+C + A VF I +R R + SWNSM+ G + +++L Y M+ G D
Sbjct: 188 YARCGKIDAARHVFNEIGKR-RNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDV 246
Query: 246 TVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T V L+ + + +G +L S ++ + ++ + + G++ A
Sbjct: 247 TFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEA 300
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 35/219 (15%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR-- 400
P+ +T + C +L GK + G +V AL+DMY+K G + AR
Sbjct: 8 PNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQV 67
Query: 401 -----------------------------ELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
ELF +P + VVSWTTMI+G + NG + +AL
Sbjct: 68 FDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKAL 127
Query: 432 DLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
++F ++ + ++RPN VT +V AC G LE G I D+ G+ N L + +
Sbjct: 128 EMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDN-GLMKN--LYVSNTL 184
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ R GK+ A + + + W +++ +H
Sbjct: 185 LEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVH 223
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKL 67
L ++ S ++ W + I K L +F +M K ++ PN +T + ACAKL
Sbjct: 97 ELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKL 156
Query: 68 SDLIYSQMIHGH-----IVKSPFV---------KCDRLDCAYKIFDEMAVR-DVASWNAM 112
L + I + ++K+ +V +C ++D A +F+E+ R ++ SWN+M
Sbjct: 157 GALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSM 216
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH----AKHLSLLKSVHS 165
++G A G L+L+ M GI+ D VT +GL A H AK L +S+ +
Sbjct: 217 MMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMET 273
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 193/610 (31%), Positives = 306/610 (50%), Gaps = 39/610 (6%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQN---DIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
WN+ + + + L LFR ++ P+ T + CA L+ + +H
Sbjct: 132 SWNALMAAVADPR---RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVH 188
Query: 78 GHIVKSP--------------FVKCDRL---DCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
G VKS + KC + +CA+ A R+V SWN ML G+A+ G
Sbjct: 189 GLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNG 248
Query: 121 FLENVLRLFYNMRL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF----GIHIGVDA 174
L M++ G+ AD +T++ + L+ L+ +H+F G+H+ D
Sbjct: 249 EAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDM 308
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
V N I++Y +C L A VF GI ++ V SWN+++ + ++ +R
Sbjct: 309 ---VPNALIAAYGRCGCLLHACRVFDGICSKM--VSSWNALIGAHAQNGEASAAIELFRE 363
Query: 235 MMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M G + D ++ SLL + + L+ G+ H + G + D + +L+S+Y +CG
Sbjct: 364 MTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCG 423
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA--AGELPDLVTVLSM 351
ARVLFD + ++ VSW MI+GY+Q G E+L+LF M++ G P L+ S
Sbjct: 424 RESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSA 483
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ C + A+ LGK +A L ++ + +++IDMYSKCGS+ DAR F L K
Sbjct: 484 LVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDA 543
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
VSWT MI G A+NG EA+ L+ ++ + P+ T+L +L AC H G LE G +
Sbjct: 544 VSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDG--LCFF 601
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
Q +L+HY+C+ +L R G+ +A+ ++ MP + DA I ++L AC +H
Sbjct: 602 QEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGE 661
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+E+G+ VA L +LEPH A YV +N YA +WD + +R M++ V K PG S
Sbjct: 662 VELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWID 721
Query: 592 INGKTCTFTA 601
I GK +F A
Sbjct: 722 IAGKVYSFVA 731
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 213/450 (47%), Gaps = 38/450 (8%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTL-LLFRQMKQND-IEPNNLTFPFIAKAC--------- 64
++++ QWN + + L +L R + +D + P+ T P K+C
Sbjct: 27 AASLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDDGRQVH 86
Query: 65 ---AKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
AKL L G+ + S + +C R+D A K+F+ MA R++ SWNA++ A
Sbjct: 87 AVAAKLG-LADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADP-- 143
Query: 122 LENVLRLFYNM--RLVGI----QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
L LF + L G +A VTV+ + A + ++VH + G DA
Sbjct: 144 -RRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPE---TGRAVHGLAVKSGWDAA 199
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
V N + YAKC ++ AE F R VVSWN M+ G + + R
Sbjct: 200 PRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLRE 259
Query: 235 MMYN--GFRLDVTTVVSLLSSFVC---PEALVQGRLVHSHGIHYGFDLDVSVI-NTLISM 288
M G D T++S+L VC PE L + R +H+ + G L ++ N LI+
Sbjct: 260 MQMEERGVPADEITMLSVLP--VCSGLPE-LAKLRELHAFVVRRGLHLTGDMVPNALIAA 316
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVT 347
Y +CG + A +FDGIC + SW A+I +AQ G+ A+ LF M A G+ PD +
Sbjct: 317 YGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFS 376
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+ S++ CG L GK + GL+ + + +L+ +Y +CG AR LF A+
Sbjct: 377 IGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVE 436
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
EK VSW TMIAG + NG E+L LF ++
Sbjct: 437 EKDEVSWNTMIAGYSQNGLPGESLQLFREM 466
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 124/268 (46%), Gaps = 18/268 (6%)
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCPEALVQGRL 265
++ WN ++A + + D+L ++ +G D T+ L S + GR
Sbjct: 29 SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQ 84
Query: 266 VHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH+ G D D V N+L+SMY +CG +D A +F+G+ R VSW A+++ A
Sbjct: 85 VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA--- 141
Query: 325 DLDEALRLFF-AMEAAG--ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
D L LF +E G PD T+++++ C E G+ A G
Sbjct: 142 DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201
Query: 382 VCNALIDMYSKCGSIGDARELFYALPE---KIVVSWTTMIAGCALNGEFVEALDLFH--Q 436
V N L+DMY+KCG + DA F P + VVSW M+ G A NGE A L Q
Sbjct: 202 VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ 261
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ E + + +T L+VL C+ L K
Sbjct: 262 MEERGVPADEITMLSVLPVCSGLPELAK 289
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/583 (31%), Positives = 282/583 (48%), Gaps = 56/583 (9%)
Query: 62 KACAKLSDL--IYSQMIHGHIVKSPF----------VKCDRLDCAYKIFDEMAVRDVASW 109
++C DL I++Q+I +K F V +D A+ +F + D SW
Sbjct: 35 QSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSW 94
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
M+ GF + E L + MR G++ + T + + +A + VH +
Sbjct: 95 TTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVK 154
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
+G DV N I Y KC + A L+F E VV+WN+M+ GC
Sbjct: 155 VGFCYDVFTRNALIHMYLKCGSITDAHLLF--DEMPNHNVVTWNTMITGC---------- 202
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
F C + RL + +V N ++ Y
Sbjct: 203 ------------------------FGCGDTERARRLFGEMP-----ERNVGSWNAVVGGY 233
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
SK G +D AR LFD + +R VSW +MIS Y Q G EAL LF M AG D + +
Sbjct: 234 SKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIIT 293
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
S++S C Q GAL++G+W Y L+++V + AL+DMY+KCG I A +F +P K
Sbjct: 294 SILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRK 353
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
+ SW M++G A++G AL+LF Q+ + PN +TF+AVL AC+H G +E+GW
Sbjct: 354 NLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGW--K 411
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
DK + P+++HY CM D+L R+G + EA + +++MP++ + IWG LL ACK+H
Sbjct: 412 KFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVH 471
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV-KKFPGQS 588
+GE V + KL YV ++N +A +W+ V R MMK+ V KK PG S
Sbjct: 472 GYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYS 531
Query: 589 LFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
++ F AEDR H++ V++ L H + Y ++
Sbjct: 532 SIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHLEVKGYEAN 574
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 57/420 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + IR V K L + M+Q +E N TF F+ KA +++HG +V
Sbjct: 94 WTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLV 153
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F +KC + A+ +FDEM +V +WN M+ G G E R
Sbjct: 154 KVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARR 213
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M + +V N + Y+
Sbjct: 214 LFGEMP---------------------------------------ERNVGSWNAVVGGYS 234
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + +A +F + E R VVSW SM++ + ++L ++ MM G D +
Sbjct: 235 KLGHVDIARSLFDLMPE--RDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIII 292
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ AL GR +H++ DV + L+ MY+KCG ID+A +F+ +
Sbjct: 293 TSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPR 352
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
+ SW AM+SG A G AL LF ME+ G P+ +T ++++S C G++E G K
Sbjct: 353 KNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKK 412
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F+ + V ++D+ + G I +A+E+ +P E VV W ++ C ++G
Sbjct: 413 FNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHG 472
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 25/317 (7%)
Query: 236 MYNGFRLDVTTVVS----------LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
+++ F +TTV + LS+ ++ + +H+ I G D +
Sbjct: 6 LFSSFWRQITTVTTKFKSKNSNYKTLSALQSCKSTEDLKKIHAQLIITGQIKDTFIATKT 65
Query: 286 ISMYS-KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
+ Y+ +ID A +F GI SWT MI G+ + + ++AL + M G +
Sbjct: 66 VESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELN 125
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T L ++ G + + G+ G +V NALI MY KCGSI DA LF
Sbjct: 126 KFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFD 185
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+P VV+W TMI GC G+ A LF ++ E N ++ AV+ + G ++
Sbjct: 186 EMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPE----RNVGSWNAVVGGYSKLGHVDI 241
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM---PIKSDAGIWGT 521
++ + + +S+ + Y + G+ EAL+ + M + +D+ I +
Sbjct: 242 ARSLFDLMPERDVVSWGSMISAYV-------QNGRAAEALELFKEMMLAGVSADSIIITS 294
Query: 522 LLCACKIHLNIEIGEYV 538
+L AC +++G ++
Sbjct: 295 ILSACAQIGALDMGRWI 311
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 295/617 (47%), Gaps = 22/617 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK----ACA 65
L+ +R++T W +R L LFR M + P+ +T +
Sbjct: 98 LSSPHRNATT--WTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP 155
Query: 66 KLSDLIYSQMIHGHI-----VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
L + H+ + + K L A ++F EM +D ++NAM++G ++ G
Sbjct: 156 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 215
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L+LF MR GI A T + A HL L VH+ + +V V N
Sbjct: 216 LHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNN 275
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ + Y+KCD L +F + ER VS+N ++A + L +R M GF
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPER--DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
V ++LS + G+ +H+ + G + + N LI MYSKCG +D+A+
Sbjct: 334 DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F +++ +SWTA+I+GY Q G +EAL+LF M AG PD T S+I
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+ LG+ +Y G K +V + L+DMY+KCG + +A F +PE+ +SW +I+
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A GE A+ +F ++ P+ VTFL+VL AC+H G ++ + S
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADE--CMKYFHLMKHQYSI 571
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
+P +HY+C+ D LGR G + + MP K+D IW ++L +C+IH N E+ A
Sbjct: 572 SPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAAD 631
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
LF +EP A PYV ++N YA G+W+ A ++ +M+ V+K G S I K +F
Sbjct: 632 KLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFA 691
Query: 601 AEDRYHAESELTYPVLD 617
+ D LT P++D
Sbjct: 692 SND-------LTSPMID 701
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 208/460 (45%), Gaps = 16/460 (3%)
Query: 71 IYSQMIHGHI-----VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
++ QM H +I + S + L A +F R+ +W M+ A G +
Sbjct: 65 MFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDA 124
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L LF M G+ D VTV + + S+H F I G+D V VCNT + +
Sbjct: 125 LSLFRAMLGEGVIPDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDA 179
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y K L A VF +E + V++N+M+ GC+ +L + M G
Sbjct: 180 YCKHGLLAAARRVF--LEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHF 237
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T S+L+ L+ G VH+ + L+V V N+L+ YSKC +D R LFD +
Sbjct: 238 TFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEM 297
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+R VS+ +I+ YA LRLF M+ G ++ +M+S G + +GK
Sbjct: 298 PERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGK 357
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
GL ++ NALIDMYSKCG + A+ F EK +SWT +I G NG
Sbjct: 358 QIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG 417
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ EAL LF + LRP+R TF ++++A + + G + Y + Y +
Sbjct: 418 QHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMI--GLGRQLHSYLIRS-GYKSSVF 474
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
S + D+ + G L EAL MP ++ W ++ A
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSIS-WNAVISA 513
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 279/554 (50%), Gaps = 7/554 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC LD A K+FD M R++ SW AM+ G +Q +R F MR+ G
Sbjct: 50 YSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAF 109
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+A + + K +H + G+ +++ V + Y+KC + A VF E
Sbjct: 110 SSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVF--EEM 167
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ VSW +M+ G + +F+++L ++ M+ +D + S L + +A GR
Sbjct: 168 PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGR 227
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF--DGICDRTRVSWTAMISGYAQ 322
VHS + GF+ D+ V N L MYSK GD++SA +F D C R VS+T +I GY +
Sbjct: 228 SVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC-RNVVSYTCLIDGYVE 286
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+++ L +F + G P+ T S+I C ALE G ++ V
Sbjct: 287 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 346
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+ L+DMY KCG + A + F + + ++W ++++ +G +A+ +F ++++ +
Sbjct: 347 SSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGV 406
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+PN +TF+++L C+H G +E+G + DK P +HYSC+ DLLGR G+LKE
Sbjct: 407 KPNAITFISLLTGCSHAGLVEEG--LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKE 464
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A +F+ MP + +A W + L AC+IH + E+G+ A L KLEP ++ V ++N YA
Sbjct: 465 AKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYAN 524
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
+W+ V ++R M+ VKK PG S + KT F AED H Y LD L
Sbjct: 525 ERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQ 584
Query: 623 SREEAYSSHLKWIP 636
+ Y +P
Sbjct: 585 IKAAGYVPRTDSVP 598
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 197/421 (46%), Gaps = 17/421 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
W + I ++ + + F M+ P F +ACA L +
Sbjct: 74 WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 133
Query: 71 ---IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
I S++ G ++ + KC + A K+F+EM +D SW AM+ G++++G E L
Sbjct: 134 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 193
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + D + A K +SVHS + +G ++D+ V N Y+
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D++ A VF GI+ R VVS+ ++ G ++ + L+ + + G + T
Sbjct: 254 KAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
SL+ + AL QG +H+ + FD D V + L+ MY KCG ++ A FD I D
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGD 372
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
T ++W +++S + Q G +A+++F M G P+ +T +S+++GC +G +E G +
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F + + G+ + +ID+ + G + +A+E +P E W + + C ++G
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492
Query: 426 E 426
+
Sbjct: 493 D 493
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 119/214 (55%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + ++ ++ + L +G+ +H+ I G+ + N L++MYSKCG++D A LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + R VSWTAMISG +Q EA+R F M GE+P S I C G++E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
+GK A G+ + V + L DMYSKCG++ DA ++F +P K VSWT MI G +
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
GEF EAL F ++++ ++ ++ + L AC
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 4/182 (2%)
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
L D + +I ++ L GK G + N L++MYSKCG + A +
Sbjct: 2 LRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK 61
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
LF +P++ +VSWT MI+G + N +F EA+ F + P + F + ++AC G
Sbjct: 62 LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
+E G + + EL S + D+ + G + +A + MP K + W
Sbjct: 122 IEMGKQMHCLALK---FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTA 177
Query: 522 LL 523
++
Sbjct: 178 MI 179
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/552 (30%), Positives = 284/552 (51%), Gaps = 9/552 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A +FDEM RDV +W AM+ G+A + F+ M G + T+ + ++ +
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD-DLKMAELVFCGIEERLRTVVSW 212
K L+ VH + +G++ + V N ++ YA C ++ A L+F I +++ V+W
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI--KVKNDVTW 181
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
+++ G T+ L Y+ M+ + + + + +++ G+ +H+ I
Sbjct: 182 TTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIK 241
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GF ++ V+N+++ +Y +CG + A+ F + D+ ++W +IS ++ D EAL +
Sbjct: 242 RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLM 300
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F E+ G +P+ T S+++ C AL G+ G NV + NALIDMY+K
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360
Query: 393 CGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
CG+I D++ +F + ++ +VSWT+M+ G +G EA++LF +++ +RP+R+ F+A
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
VL AC H G +EKG + + GI NP+ D Y+C+ DLLGR GK+ EA + V+ MP
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGI--NPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 512 IKSDAGIWGTLLCACKIHL-NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
K D WG +L ACK H N I A + +L+P YV ++ YA G+W A
Sbjct: 479 FKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFA 538
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
+R MM+ KK G S + + +F D+ + Y VL L +RE Y
Sbjct: 539 RVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVP 598
Query: 631 HL-KWIPEHEAG 641
L + + E G
Sbjct: 599 ELDSLVNDQEVG 610
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 200/418 (47%), Gaps = 21/418 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + N + F +M + PN T + K+C + L Y ++HG +V
Sbjct: 79 WTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV 138
Query: 82 K--------------SPFVKCD-RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + + C ++ A IF ++ V++ +W ++ GF +G L
Sbjct: 139 KLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+++ M L + + +A+ ++ K +H+ I G +++ V N+ + Y
Sbjct: 199 KMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY 258
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C L A+ F +E+ + +++WN++++ D + L F R GF + T
Sbjct: 259 CRCGYLSEAKHYFHEMED--KDLITWNTLISELERSDSSEALLMFQR-FESQGFVPNCYT 315
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
SL+++ AL G+ +H GF+ +V + N LI MY+KCG+I ++ +F I
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 307 DRTR-VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG- 364
DR VSWT+M+ GY G EA+ LF M ++G PD + ++++S C +G +E G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
K+F+ G+ + + N ++D+ + G IG+A EL +P K S W ++ C
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N ++S + K G ++ AR LFD + DR V+WTAMI+GYA A F M G
Sbjct: 50 NLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ T+ S++ C L G G++ ++ V NA+++MY+ C +A L
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 403 -FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHT 459
F + K V+WTT+I G G+ + L ++ Q++ ++ P +T A +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
K S+I+ +G N L + + DL R G L EA + M K D W
Sbjct: 229 VTTGKQIHASVIK---RGFQSN--LPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITW 282
Query: 520 GTLL 523
TL+
Sbjct: 283 NTLI 286
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
K +++ N ++ + K G + +AR LF +P++ VV+WT MI G A + A + FH+
Sbjct: 43 KHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISY--NPELDHYSCMAD 492
+++ PN T +VL++C + L G + +++ +G Y N ++ Y+ +
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
++ A + + +K+D W TL+ HL IG Y LE P
Sbjct: 162 ------TMEAACLIFRDIKVKNDV-TWTTLITGF-THLGDGIGGLKMYKQMLLENAEVTP 213
Query: 553 Y 553
Y
Sbjct: 214 Y 214
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 282/538 (52%), Gaps = 17/538 (3%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
DV SWN+++ A+ G L F +MR + + + +A + K H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
G +D+ V + I Y+ C L+ A VF I +R +VSW SM+ G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR--DIVSWTSMIRGYDLNGN 157
Query: 225 FDDSLNFYRHMMYN------GFRLDVTTVVSLLSSFVCPEALVQG--RLVHSHGIHYGFD 276
D+++ ++ ++ + LD +VS++S+ C +G +HS I GFD
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA--CSRVPAKGLTESIHSFVIKRGFD 215
Query: 277 LDVSVINTLISMYSKCGD--IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
VSV NTL+ Y+K G+ + AR +FD I D+ RVS+ +++S YAQ G +EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 335 AMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ + + +T+ +++ SGAL +GK + GL+D+V+V ++IDMY KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR+ F + K V SWT MIAG ++G +AL+LF +++ +RPN +TF++VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G +GW G+ P L+HY CM DLLGR G L++A D +Q M +K
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGV--EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
D+ IW +LL AC+IH N+E+ E LF+L+ + Y+ +++ YA GRW V +R
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
+MK + K PG SL +NG+ F D H + E Y L L E Y S+
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 228/465 (49%), Gaps = 33/465 (7%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L NR + + WNS I + ++ + LL F M++ + P +FP KAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 65 AKLSDLIYSQMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWN 110
+ L D+ + H V S + C +L+ A K+FDE+ RD+ SW
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWT 146
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQAD----FVTVMGLT---QAAIHAKHLSLLKSV 163
+M+ G+ G + + LF ++ LV D F+ MGL A L +S+
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDD--LKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
HSF I G D VSV NT + +YAK + + +A +F I ++ R VS+NS+++
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVYAQ 263
Query: 222 GDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+++ +R ++ N + T+ ++L + AL G+ +H I G + DV
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V ++I MY KCG +++AR FD + ++ SWTAMI+GY G +AL LF AM +G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 341 ELPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ +T +S+++ C +G +E +WF+ G++ + ++D+ + G + A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 400 RELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+L + P+ I+ W++++A C ++ A +L ELD
Sbjct: 444 YDLIQRMKMKPDSII--WSSLLAACRIHKNVELAEISVARLFELD 486
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 312/639 (48%), Gaps = 30/639 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+R+ TI++ N+ I ++ K L+F M+ + + P+ T + CA
Sbjct: 203 FDRMEEHDTISR-NAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADH 261
Query: 70 LIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH ++S + +L A +F M+ RD+ SWN M+
Sbjct: 262 FSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISS 321
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ Q + L+ + + +T A L K VH+ + + + +
Sbjct: 322 YVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN 381
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V N+ I+ Y KC+ ++ AE VF + VVS+N ++ G + ++ + +
Sbjct: 382 LLVGNSLITMYGKCNSMEDAEKVFQSMPTH--DVVSYNVLIGGYAVLEDGTKAMQVFSWI 439
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
G + + T++++ SF L GR +H++ I GF D V N+LI+MY+KCG+
Sbjct: 440 RSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGN 499
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
++S+ +F+ I ++ VSW A+I+ AQ G +EAL+LF M+ AG D V + +S
Sbjct: 500 LESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSS 559
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS- 413
C +LE G GL + V NA +DMY KCG + E+ +P++ +
Sbjct: 560 CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM---NEMLQMVPDQAIRPQ 616
Query: 414 --WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
W T+I+G A G F EA + F Q++ + +P+ VTF+A+L AC+H G ++KG I
Sbjct: 617 QCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKG----ID 672
Query: 472 QYDDKGISY--NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
Y+ S+ +P + H C+ DLLGR G+ EA F++ MP+ + IW +LL + + H
Sbjct: 673 YYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTH 732
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+EIG A L +L+P + YV ++N YA RW V +R+ MK + K P S
Sbjct: 733 KNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSW 792
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ + TF DR H +E Y LD + L RE Y
Sbjct: 793 LKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGY 831
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 236/540 (43%), Gaps = 36/540 (6%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+TL +RQM++ + N F + C L + + + H++ S
Sbjct: 128 ETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLI 187
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
F R+ A K+FD M D S NAM+ ++ G +F +MR G++ D
Sbjct: 188 TMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDAT 247
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ L A H S +HS + +D+ V+V N ++ Y+ L AE +F +
Sbjct: 248 TLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 307
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R ++SWN+M++ D+L + + + T S L + P AL+
Sbjct: 308 SR--RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALID 365
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G++VH+ + ++ V N+LI+MY KC ++ A +F + VS+ +I GYA
Sbjct: 366 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAV 425
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVM 381
D +A+++F + +AG P+ +T++++ S L G+ Y G +
Sbjct: 426 LEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEY 485
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N+LI MY+KCG++ + +F ++ K +VSW +IA A G EAL LF +
Sbjct: 486 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAG 545
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGK 499
+ +RV L +C LE+G +Q G+ + D Y A D+ G+ GK
Sbjct: 546 NKLDRVCLAECLSSCASLASLEEG-----MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 600
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
+ E L V I+ W TL I Y Y FK + V M K
Sbjct: 601 MNEMLQMVPDQAIRPQQ-CWNTL-----------ISGYAKYGYFKEAEETFKQMVAMGRK 648
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 183/362 (50%), Gaps = 8/362 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVTVMGLTQA 150
A ++F EM R+V SW A++V + G+LE LR + MR G+ + F TV+ L
Sbjct: 98 ARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLC-G 156
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
++ + L V S I G+ VSV N+ I+ + ++ AE +F +EE +
Sbjct: 157 SLENEVPGL--QVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEH--DTI 212
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
S N+M++ ++ + M ++G R D TT+ SL+S + G +HS
Sbjct: 213 SRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLC 272
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ D V+VIN L++MYS G + A LF + R +SW MIS Y Q + +AL
Sbjct: 273 LRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDAL 332
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
+ + E+P+ +T S + C GAL GK L+ N++V N+LI MY
Sbjct: 333 KTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMY 392
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
KC S+ DA ++F ++P VVS+ +I G A+ + +A+ +F + ++PN +T +
Sbjct: 393 GKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMI 452
Query: 451 AV 452
+
Sbjct: 453 NI 454
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 181/417 (43%), Gaps = 14/417 (3%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA---KHL 157
M R ++W + G + G L MR G+ + L A + +
Sbjct: 1 MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+ ++H+ G+ +V + + Y + A +F + ER VVSW +++
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPER--NVVSWTALMV 118
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVT---TVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+ +++L YR M G + TVVSL S E V G V SH I G
Sbjct: 119 ALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSL---ENEVPGLQVASHVIVSG 175
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
VSV N+LI+M+ G + A LFD + + +S AMIS Y+ +G + +F
Sbjct: 176 LQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFS 235
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M G PD T+ S++S C + G + L +V V NAL++MYS G
Sbjct: 236 DMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 295
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ DA LF+ + + ++SW TMI+ N +AL QL + PN +TF + L
Sbjct: 296 KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALG 355
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
AC+ G L G + I +S L + + + G+ +++A QSMP
Sbjct: 356 ACSSPGALIDGKMVHAIVLQ---LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 409
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 200/645 (31%), Positives = 326/645 (50%), Gaps = 44/645 (6%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKAC--A 65
RL R + + WN+ I + A + L LFR M ++ P N++TF + +C A
Sbjct: 201 RLPRASKRDVVT-WNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEA 259
Query: 66 KLSDLIYSQMIHGHIV-----KSPFV---------KCDRLDCAYKIF----DEMAVRDVA 107
L L + IHG IV + FV K LD A+++F DE +
Sbjct: 260 GLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLV 319
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+ +AM+ Q G+ + LRLF+ M L G + VT++ + ++A + + S +F
Sbjct: 320 TCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSV----LNACSMLQVGSATAFV 375
Query: 168 IH-----IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+ + D + T +++YA+ +DL A F I+ VVSWN+M A
Sbjct: 376 LEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSP--DVVSWNAMAAAYLQH 433
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS---FVCPEALVQGRLVHSHGIHYGFDLDV 279
+ ++L + M+ G R V T ++ L++ + A G+ + S G + D
Sbjct: 434 HRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDT 493
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTR--VSWTAMISGYAQKGDLDEALRLFFAME 337
+V N ++MY+KCG + AR +F+ I R ++W +M++ Y G EA LF AME
Sbjct: 494 AVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAME 553
Query: 338 AAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
A + P+ VT ++++ ++ G+ S G + + ++ NAL++MY+KCGS+
Sbjct: 554 AEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSL 613
Query: 397 GDARELF--YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
DA+ +F + ++ V++WT++IAG A G+ AL LF + + +RPN VTF++ L
Sbjct: 614 DDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALT 673
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC H G LE+G + D GI P H+SC+ DLLGR G+L EA ++ ++
Sbjct: 674 ACNHGGKLEQGCELLSGMTPDHGIL--PASKHFSCIVDLLGRCGRLDEAEKLLERTS-QA 730
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
D W LL ACK +E GE A + +L+P A+ Y+ +A+ YA GRW+ A IR
Sbjct: 731 DVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRK 790
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
M ++ PG S +N + +F+A D+ H +SE Y L+ L
Sbjct: 791 TMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERL 835
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 226/484 (46%), Gaps = 34/484 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R +++ + IR + K + LF +M ++ PN + AC+ L +L +
Sbjct: 105 RFASVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGR 161
Query: 75 MIH--------------GHIVKSPFVKCDRLDCAYKIFDEM---AVRDVASWNAMLVGFA 117
IH G+ + S + KC L A + FD + + RDV +WNAM+ F
Sbjct: 162 RIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFL 221
Query: 118 QMGFLENVLRLFYNMRLVGI-QADFVTVMGLTQAAIHAKHLSL--LKSVHSFGIHIGVDA 174
+ G L+LF +M G + VT + + + + A LSL ++++H + G++
Sbjct: 222 RNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER 281
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFC--GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
+ V + SY K L A VF G EE ++V+ ++M++ C +SL +
Sbjct: 282 EAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLF 341
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH-YGFDLDVSVINTLISMYSK 291
M G + T+VS+L++ + V + D + TL++ Y++
Sbjct: 342 FAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYAR 401
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
D+ AR FD I VSW AM + Y Q EAL LF M G P + T ++
Sbjct: 402 SNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITA 461
Query: 352 ISGCG---QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL-- 406
++ C A +GK + GL+ + V NA ++MY+KCGS+ DAR +F +
Sbjct: 462 LTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISP 521
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD--LRPNRVTFLAVLQACTHTGFLEK 464
+ ++W +M+A +G EA +LF Q ME + ++PN+VTF+AVL A T + +
Sbjct: 522 ARRDCITWNSMLAAYGHHGLGKEAFELF-QAMEAEKLVKPNKVTFVAVLDASTSRTSIAQ 580
Query: 465 GWAI 468
G I
Sbjct: 581 GREI 584
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 193/436 (44%), Gaps = 50/436 (11%)
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSPF----------------VKCDRLDCAYKIFD 99
T+ + +AC +L L Q +H HI+ KC L A + D
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 100 EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
A V S AM+ + + G + + LF M ++ + ++ L A +L+
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAA 159
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL-----RTVVSWNS 214
+ +HS + + + N IS Y+KC L A+ F +RL R VV+WN+
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAF----DRLPRASKRDVVTWNA 215
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEA----LVQGRLVHSH 269
M++ ++L +R M +G + T VS+L S C EA L R +H
Sbjct: 216 MISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDS--CVEAGLLSLEDVRAIHGR 273
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLF----DGICDRTRVSWTAMISGYAQKGD 325
+ G + + V L+ Y K G +D A +F D + V+ +AMIS Q G
Sbjct: 274 IVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGW 333
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGC-----GQSGALELGKWFDNYACSGGLKDNV 380
E+LRLFFAM G P VT++S+++ C G + A L + + + + +DNV
Sbjct: 334 PQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT---RDNV 390
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ L+ Y++ + AR F A+ VVSW M A + EAL LF +++
Sbjct: 391 L-GTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLE 449
Query: 441 DLRPNRVTFLAVLQAC 456
+RP+ TF+ L AC
Sbjct: 450 GVRPSVATFITALTAC 465
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 148/299 (49%), Gaps = 20/299 (6%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I +AKC +L AE + +R +V S +M+ + D ++ + M R
Sbjct: 87 IVMHAKCGNLAEAE----ALADRFASVYSCTAMIRAWMEHGRPDKAMELFDRME---VRP 139
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ +++L+++ C L GR +HS F+ + + N LISMYSKCG + A+ F
Sbjct: 140 NCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAF 199
Query: 303 DGI---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-ELPDLVTVLSMISGCGQS 358
D + R V+W AMIS + + G EAL+LF M+ G P+ VT +S++ C ++
Sbjct: 200 DRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEA 259
Query: 359 GALELG--KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL----PEKIVV 412
G L L + G++ V AL+D Y K GS+ DA E+F P +V
Sbjct: 260 GLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLV 319
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
+ + MI+ C NG E+L LF + +P+ VT ++VL AC+ L+ G A + +
Sbjct: 320 TCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS---MLQVGSATAFV 375
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 13/212 (6%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVS--VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
AL QG+ +H+H + DL + + LI M++KCG++ A L D + S TA
Sbjct: 57 RALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA--SVYSCTA 114
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
MI + + G D+A+ LF ME P+ ++++++ C G L G+ +
Sbjct: 115 MIRAWMEHGRPDKAMELFDRMEVR---PNCHALIALVNACSCLGNLAAGRRIHSQISDRD 171
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALP---EKIVVSWTTMIAGCALNGEFVEALD 432
++N ++ NALI MYSKCGS+ DA++ F LP ++ VV+W MI+ NG EAL
Sbjct: 172 FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQ 231
Query: 433 LFHQLMELD--LRPNRVTFLAVLQACTHTGFL 462
LF M+ D PN VTF++VL +C G L
Sbjct: 232 LFRD-MDRDGAPPPNSVTFVSVLDSCVEAGLL 262
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/582 (30%), Positives = 299/582 (51%), Gaps = 26/582 (4%)
Query: 24 SQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS 83
S+I + E L L + + +I + + + + C K+ + IH H++KS
Sbjct: 29 SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 88
Query: 84 P-----FVKCDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
FV L +K +FD + V+DV SW +M+ G+ ++G N L L
Sbjct: 89 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 148
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F+ M G++ + T+ + +A L L + H + G D++ + + I + +
Sbjct: 149 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR 208
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTV 247
L A +F + E + W S+++ T D FD++L F+ M + G D T
Sbjct: 209 NCALDDARQLFDELLEP--DAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTF 266
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++L++ L QG+ VH+ I GF +V V ++L+ MY KCG + ++ +FD +
Sbjct: 267 GTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPI 326
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ VSW+A++ GY Q GD +++F ME DL +++ C A+ GK
Sbjct: 327 KNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEV 382
Query: 368 D-NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y GG +D V+V +AL+D+Y+KCG I A+ +F +P + +++W +MI G A NG
Sbjct: 383 HCQYIRKGGWRD-VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGR 441
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EAL +F+Q+++ ++P+ ++F+ +L AC+H G +++G I D GI ++H
Sbjct: 442 GEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVG--IEH 499
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DLLGR G L+EA +++ + D+ +W LL AC N EI E +A + +LE
Sbjct: 500 YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 559
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
P YV +AN Y GRW+ IR +MK V K PG+S
Sbjct: 560 PDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKS 601
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 209/438 (47%), Gaps = 25/438 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
W S I V + +L LF +M +EPN T + KAC++L DL ++ HG
Sbjct: 129 WTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVL 188
Query: 79 -------HIVKSPFVKCDRLDCAY----KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+++ S + +CA ++FDE+ D W +++ + F + LR
Sbjct: 189 GRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALR 248
Query: 128 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
FY+M R G+ D T + A + L K VH+ I G +V V ++ + Y
Sbjct: 249 FFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMY 308
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC + ++ +F + ++ VSW++++ G C GD F + +R M ++D+
Sbjct: 309 GKCGSVGESQRIFDRMP--IKNSVSWSALLGGYCQNGD-FKSVIQIFRKME----KVDLY 361
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
++L + A+ QG+ VH I G DV V + L+ +Y+KCG I+ A+ +FD +
Sbjct: 362 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 421
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
R ++W +MI G+AQ G +EALR+F M G PD ++ + ++ C G ++ G+
Sbjct: 422 PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGR 481
Query: 366 -WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCAL 423
+F + G+K + + ++D+ + G + +A L + S W ++ C
Sbjct: 482 EYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTT 541
Query: 424 NGEFVEALDLFHQLMELD 441
+ A + ++MEL+
Sbjct: 542 CTNYEIAERIAKRVMELE 559
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 303/604 (50%), Gaps = 53/604 (8%)
Query: 71 IYSQMIHGHIVKSPFVK-------CDRL----DCAYKIFDEMAVRDVASWNAMLVGFAQM 119
++SQ I + +P + C RL AYK+F ++ DV WN M+ G++++
Sbjct: 53 LHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKV 112
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH-AKHLSLLKSVHSFGIHIGVDADVSV 178
+RL+ NM G+ D T L L+ K +H + G+ +++ V
Sbjct: 113 DCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYV 172
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRT-VVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
N + Y+ C + MA VF + R + V SWN M++G ++++S+ M
Sbjct: 173 QNALVKMYSLCGLMDMARGVF---DRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
N + T+V LL C + + + VH + + + + N L++ Y+ CG++
Sbjct: 230 N--LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 296 DSA-------------------------------RVLFDGICDRTRVSWTAMISGYAQKG 324
D A R FD + R R+SWT MI GY + G
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+E+L +F M++AG +PD T++S+++ C G+LE+G+W Y +K++V+V N
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALIDMY KCG A+++F+ + ++ +WT M+ G A NG+ EA+ +F Q+ ++ ++P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+ +T+L VL AC H+G +++ D I P L HY CM D+LGR G +KEA
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE--PSLVHYGCMVDMLGRAGLVKEAY 525
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ ++ MP+ ++ +WG LL A ++H + + E A + +LEP + A Y + N YA
Sbjct: 526 EILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCK 585
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
RW + +R + +KK PG SL +NG F A D+ H +SE Y L+ LA S
Sbjct: 586 RWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQEST 645
Query: 625 EEAY 628
AY
Sbjct: 646 FAAY 649
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 47/277 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I E +++ L +M++N + P ++T + AC+K+ D + +H ++
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE---- 123
+ + + C +D A +IF M RDV SW +++ G+ + G L+
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 124 ---------------------------NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
L +F M+ G+ D T++ + A H
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + + + ++ + DV V N I Y KC + A+ VF +++R + +W +MV
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDK--FTWTAMV 441
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
G + +++ + M + D T + +LS+
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 36 HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP----------- 84
+++L +FR+M+ + P+ T + ACA L L + I +I K+
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNAL 409
Query: 85 ---FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
+ KC + A K+F +M RD +W AM+VG A G + +++F+ M+ + IQ D
Sbjct: 410 IDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDD 469
Query: 142 VTVMGLTQAAIHA 154
+T +G+ A H+
Sbjct: 470 ITYLGVLSACNHS 482
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 297/582 (51%), Gaps = 34/582 (5%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
PNN ++KA L + YS ++ HI P D A+ I M +W+
Sbjct: 56 PNN---HLLSKAI-HLKNFPYSSLLFSHIAPHPN------DYAFNI---MIRALTTTWHN 102
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG 171
+ L LF+ M + + D T + + LS + HS +
Sbjct: 103 YPLA----------LSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLA 152
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+ +D ++ I++YA+C + A VF I R VSWNSM+AG +++
Sbjct: 153 LHSDPHTAHSLITAYARCGLVASARKVFDEIPHR--DSVSWNSMIAGYAKAGCAREAVEV 210
Query: 232 YRHM-MYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHYGFDLDVSVINTLISM 288
+R M +GF D ++VSLL + C E L GR V + G L+ + + LISM
Sbjct: 211 FREMGRRDGFEPDEMSLVSLLGA--CGELGDLELGRWVEGFVVERGMTLNSYIGSALISM 268
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y+KCG+++SAR +FDG+ R ++W A+ISGYAQ G DEA+ LF M+ + +T+
Sbjct: 269 YAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITL 328
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
+++S C GAL+LGK D YA G + ++ V ALIDMY+K GS+ +A+ +F +P+
Sbjct: 329 TAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQ 388
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNRVTFLAVLQACTHTGFLEKGW 466
K SW MI+ A +G+ EAL LF + + RPN +TF+ +L AC H G +++G+
Sbjct: 389 KNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGY 448
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + G+ P+++HYSCM DLL R G L EA D ++ MP K D G LL AC
Sbjct: 449 RLFDMMSTLFGLV--PKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGAC 506
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+ N++IGE V + +++P ++ Y+ + YA W+ A +R +M++ + K PG
Sbjct: 507 RSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPG 566
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
S + F A D +S ++D L + E Y
Sbjct: 567 CSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGY 608
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 195/390 (50%), Gaps = 20/390 (5%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--------------GHIVKS 83
L LF +M + P+N TFPF +CA L+ L ++ H H + +
Sbjct: 106 ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLIT 165
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFV 142
+ +C + A K+FDE+ RD SWN+M+ G+A+ G + +F M R G + D +
Sbjct: 166 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 225
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+++ L A L L + V F + G+ + + + IS YAKC +L+ A +F G+
Sbjct: 226 SLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGM 285
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R V++WN++++G D+++ + M + + T+ ++LS+ AL
Sbjct: 286 AA--RDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDL 343
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ + + GF D+ V LI MY+K G +D+A+ +F + + SW AMIS A
Sbjct: 344 GKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAA 403
Query: 323 KGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 379
G EAL LF M E G P+ +T + ++S C +G ++ G + FD + GL
Sbjct: 404 HGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 463
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEK 409
+ + ++D+ ++ G + +A +L +PEK
Sbjct: 464 IEHYSCMVDLLARAGHLYEAWDLIRKMPEK 493
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 161/362 (44%), Gaps = 52/362 (14%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WNS I A + + +FR+M + D EP+ ++ + AC +L DL + + G
Sbjct: 190 SWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGF 249
Query: 80 IVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+V+ S + KC L+ A +IFD MA RDV +WNA++ G+AQ G +
Sbjct: 250 VVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEA 309
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ LF+ M+ + A+ +T+ + A L L K + + G D+ V I
Sbjct: 310 ILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDM 369
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM--YNGFRLD 243
YAK L A+ VF + + + SWN+M++ K ++L+ ++HM G R +
Sbjct: 370 YAKSGSLDNAQRVFKDMPQ--KNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPN 427
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T V LLS+ VH+ + G+ L +++TL + K
Sbjct: 428 DITFVGLLSA-----------CVHAGLVDEGYRL-FDMMSTLFGLVPKIEH--------- 466
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
++ M+ A+ G L EA L M E PD VT+ +++ C +++
Sbjct: 467 ---------YSCMVDLLARAGHLYEAWDLIRKMP---EKPDKVTLGALLGACRSKKNVDI 514
Query: 364 GK 365
G+
Sbjct: 515 GE 516
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 294/573 (51%), Gaps = 43/573 (7%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A ++FD++ + +N+++ G++ + + LF M G+ + T+ + +A
Sbjct: 38 LQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKA 97
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
VH I +G+ + V V N I+ Y C + A +F I ++ T+V
Sbjct: 98 CGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDK--TLV 155
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHS 268
SWNSM+ G + + ++ +R M G D T V+LLS VC ++ L GR VH
Sbjct: 156 SWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLS--VCSQSRDLDLGRYVHF 213
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD- 327
G +D+ V N L+ MY+KCG++ SA+ +FD ++ VSWT+MIS YAQ G ++
Sbjct: 214 CIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEV 273
Query: 328 ------------------------------EALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
EAL LF M + +PD T++S+++ C Q
Sbjct: 274 ARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQ 333
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G L +GK NY S V + N+LIDMY+KCG + A ++F +P K +VSW +
Sbjct: 334 LGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVI 393
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I AL+G +EA+ LF ++ P+ +T +L AC+H+G ++ G + +D G
Sbjct: 394 IGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG----LYYFDRMG 449
Query: 478 ISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
+ Y E++HY+CM DLLGR G L EA++ + MP+K D +WG LL AC+IH N+EIG
Sbjct: 450 VIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIG 509
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
+ + L +LEPHS YV ++N Y RW+ V IR +M +KK S I+G
Sbjct: 510 KQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGC 569
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F +D+ H S Y +LD L H R Y
Sbjct: 570 IYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGY 602
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 228/466 (48%), Gaps = 47/466 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS IR N ++ +LLFR+M + + PN T PF+ KAC S + ++HG +
Sbjct: 56 YNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAI 115
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + +V C + CA K+FD++ + + SWN+M+ G+A MG +
Sbjct: 116 KLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFL 175
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-GVDADVSVCNTWISSY 186
LF MR G++ D T + L ++ L L + VH F I I GV D+ V N + Y
Sbjct: 176 LFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVH-FCIEITGVKIDIIVRNALVDMY 234
Query: 187 AKCDDLKMAELVFCGIEERL-----------------------------RTVVSWNSMVA 217
AKC +L A+ +F +E+ + VVSWNSM++
Sbjct: 235 AKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMIS 294
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
++ ++L+ + M + D T+VS+L++ LV G+ +H++ +
Sbjct: 295 CYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAY 354
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
V++ N+LI MY+KCG + +A +F + + VSW +I A G EA++LF M+
Sbjct: 355 GVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQ 414
Query: 338 AAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
A G LPD +T+ ++S C SG +++G +FD + + ++D+ + G +
Sbjct: 415 ADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLL 474
Query: 397 GDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
G+A EL +P K VV W ++ C ++G + QL+EL+
Sbjct: 475 GEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELE 520
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 199/403 (49%), Gaps = 39/403 (9%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCD--DLKMAELVFCGIEERLRTVVSWNSMVA 217
LK +H+ I G+ + IS A D DL+ A+ +F I + + + +NS++
Sbjct: 4 LKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFM--YNSLIR 61
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G + D D++ +R M+ +G + T+ +L + C A + LVH I G
Sbjct: 62 GYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGS 121
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
V V N LI++Y CG I AR LFD I D+T VSW +MI GYA G+ EA LF M
Sbjct: 122 LVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMR 181
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC---- 393
G PD T ++++S C QS L+LG++ G+K +++V NAL+DMY+KC
Sbjct: 182 EWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLH 241
Query: 394 ---------------------------GSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
GSI AR++F +P K VVSW +MI+ G+
Sbjct: 242 SAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQ 301
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+ EALDLF+++ + P+ T +++L AC+ G L G I +KG +Y L
Sbjct: 302 YREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKG-AYGVTL-- 358
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
Y+ + D+ + G + ALD MP K+ W ++ A +H
Sbjct: 359 YNSLIDMYAKCGPVVTALDIFLEMPGKNLVS-WNVIIGALALH 400
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 19/325 (5%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISM--YSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+L+H+ I +G + + LIS GD+ A+ +FD I + + ++I GY+
Sbjct: 5 KLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYS 64
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
D +A+ LF M +G P+ T+ ++ CG A A G+ V
Sbjct: 65 NSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVF 124
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V NALI +Y CG I AR+LF + +K +VSW +MI G A G + EA LF ++ E
Sbjct: 125 VQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWG 184
Query: 442 LRPNRVTFLAVLQACTHTGFLEKG----WAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ P+ TF+ +L C+ + L+ G + I I I N +D Y+ +L +
Sbjct: 185 MEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQ 244
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP-HSAAPYVEM 556
D Q + S W +++ A H +IE VA +F P + + M
Sbjct: 245 A----IFDRTQEKNVVS----WTSMISAYAQHGSIE----VARQIFDQMPGKNVVSWNSM 292
Query: 557 ANKYALGGRWDGVANIRTMMKRNQV 581
+ Y G++ ++ M+ ++V
Sbjct: 293 ISCYLREGQYREALDLFNKMRNSRV 317
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 115/281 (40%), Gaps = 47/281 (16%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS I + + LLFR+M++ +EP+ TF + C++ DL + +H
Sbjct: 153 TLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVH 212
Query: 78 ----------GHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
IV++ V KC L A IFD ++V SW +M+ +AQ G +E
Sbjct: 213 FCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIE 272
Query: 124 -------------------------------NVLRLFYNMRLVGIQADFVTVMGLTQAAI 152
L LF MR + D T++ + A
Sbjct: 273 VARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACS 332
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L + K +H++ + V++ N+ I YAKC + A +F +E + +VSW
Sbjct: 333 QLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIF--LEMPGKNLVSW 390
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
N ++ +++ + M +G D T+ LLS+
Sbjct: 391 NVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSA 431
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 242/448 (54%), Gaps = 33/448 (7%)
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+M+ G + + +++L Y HM+Y+ + T LL + AL + + +H+H I
Sbjct: 86 WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHII 145
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD---- 327
GF ++ N+L+++YSK GDI SAR+LFD + R VSW +MI GY + G+++
Sbjct: 146 KMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYE 205
Query: 328 ---------------------------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
EAL LF M+ AG D V ++S + C G
Sbjct: 206 IFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGV 265
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ GKW Y ++ + ++ LIDMY+KCG + +A E+F + EK V WT MI+G
Sbjct: 266 LDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISG 325
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A++G EAL+ F ++ + PN++TF +L AC+H G + + A + + ++ +
Sbjct: 326 YAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHE--AKLLFESMERIHGF 383
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P ++HY CM DLLGR G LKEA + +++MP+K +A IWG LL AC IH N+E+G+ +
Sbjct: 384 KPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGK 443
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L +++P Y+ +A+ +A G W+ A +R MK V K PG S+ +NG F
Sbjct: 444 ILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFL 503
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAY 628
A D H + + +L+ + REE Y
Sbjct: 504 AGDESHPQIKEIDHMLEQIVERLREEGY 531
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 196/438 (44%), Gaps = 50/438 (11%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV----------------KCDRLDCA 94
E N + + C+ + +L + IHG ++K+ + L A
Sbjct: 15 ESNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYA 71
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+FD + + WN M+ G++ E L L+++M + + T L +A
Sbjct: 72 RTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--------- 205
L + +H+ I +G +++ N+ ++ Y+K D+K A L+F +++R
Sbjct: 132 SALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191
Query: 206 --------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
R ++SW SM++GC K ++LN + M G +LD
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+VS L + L QG+ +H++ + ++D + LI MY+KCGD++ A +F +
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ WTAMISGYA G EAL F M+ AG P+ +T +++ C +G + K
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 366 -WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCAL 423
F++ G K ++ ++D+ + G + +A EL +P K + W ++ C +
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431
Query: 424 NGEFVEALDLFHQLMELD 441
+G + L+++D
Sbjct: 432 HGNLELGKQIGKILIQVD 449
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 50/365 (13%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI+R +T WN+ IR N E + LLL+ M + + N TFPF+ KAC+ +S
Sbjct: 75 FDRIFRPNTF-MWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA 133
Query: 70 LIYSQMIHGHIVKSPF-------------------------------------------- 85
L +Q IH HI+K F
Sbjct: 134 LEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG 193
Query: 86 -VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
KC ++ AY+IF+ M R++ SW +M+ G G + L LF+ M+ GI+ D V +
Sbjct: 194 YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVAL 253
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ QA L K +H++ ++ D + I YAKC DL+ A VF +EE
Sbjct: 254 VSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEE 313
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ +V W +M++G + ++L ++ M G + T +L++ + + +
Sbjct: 314 KGVSV--WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 265 LV-HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQ 322
L+ S +GF + ++ + + G + A L + + + + W A+++
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431
Query: 323 KGDLD 327
G+L+
Sbjct: 432 HGNLE 436
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 303/625 (48%), Gaps = 91/625 (14%)
Query: 35 AHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH-GHI--------VKSP 84
AH ++ LF+ ++ P + ++ K K ++ ++ ++ GHI +
Sbjct: 80 AHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMFHAYVLKLGHIDDHFIRNAILDM 139
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K ++D A +F++MA R +A WN+M+ G + G + LF M
Sbjct: 140 YAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA---------- 189
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
++ + ++ YAK DL+ A F + E
Sbjct: 190 -----------------------------RNIITWTSMVTGYAKMGDLESARRYFDEMPE 220
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS----------- 253
R +VVSWN+M + + ++LN + M+ G D TT V +SS
Sbjct: 221 R--SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLAD 278
Query: 254 ---------FVCPEALVQGRLVHSHGIHYGFDLDVSVI------------NTLISMYSKC 292
+ + V+ L+ H ++ ++ N +IS Y++
Sbjct: 279 SILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRV 338
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSM 351
G + AR LFD + R VSW +MI+GYAQ G+ ++ LF M + ++ PD VT+ S+
Sbjct: 339 GKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASV 398
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+S CG GAL+L W + +K + N+LI MYSKCGS+ DA +F + + V
Sbjct: 399 LSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDV 458
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
VS+ T+I+G A NG EA+ L + E + P+ VT++ VL AC+H G L +G +
Sbjct: 459 VSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVF-- 516
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
K I P +DHY+CM DLLGR G+L EA +QSMP+K AG++G+LL A +IH
Sbjct: 517 ----KSIQ-APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKR 571
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+ +GE A LF+LEP + YV ++N YA GRW+ V +R MMK+ +KK G S
Sbjct: 572 VGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVE 631
Query: 592 INGKTCTFTAEDRYHAESELTYPVL 616
G+ FT DR H +S+ Y +L
Sbjct: 632 YKGQVHKFTVGDRSHEQSKDIYKLL 656
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 200/457 (43%), Gaps = 95/457 (20%)
Query: 65 AKLSDLIYSQMIHGHIVKSPF-----------VKCDRLDC--AY--KIFDEMAVRDVASW 109
+K+S++ + HGH+V + + C RL AY IF D + +
Sbjct: 9 SKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVY 68
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
+ ML +++MG V+ LF + ++ + L + A + ++ H++ +
Sbjct: 69 SCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNM-----FHAYVLK 123
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
+G D + N + YAK + +A +F + ER T+ WNSM++GC +++
Sbjct: 124 LGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAER--TLADWNSMISGCWKSGNETEAV 181
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
+ M P ++ ++++ Y
Sbjct: 182 VLFNMM---------------------PAR------------------NIITWTSMVTGY 202
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+K GD++SAR FD + +R+ VSW AM S YAQK EAL LF M G PD T +
Sbjct: 203 AKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWV 262
Query: 350 SMISGCGQSG--------------------------ALELGKWFDNYACSGGLKD----- 378
IS C G L++ F N + + D
Sbjct: 263 VTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQ 322
Query: 379 -NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N + N +I Y++ G + ARELF +P++ VVSW +MIAG A NGE +++LF ++
Sbjct: 323 RNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEM 382
Query: 438 ME-LDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQ 472
+ +D++P+ VT +VL AC H G L+ W + I++
Sbjct: 383 ISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVR 419
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 183/434 (42%), Gaps = 82/434 (18%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T+ WNS I + ++LF M +I + ++ M+
Sbjct: 160 TLADWNSMISGCWKSGNETEAVVLFNMMPARNI-------------------ITWTSMVT 200
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G + K L+ A + FDEM R V SWNAM +AQ + L LF+ M GI
Sbjct: 201 G------YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254
Query: 138 QADFVT-VMGLTQAA--------------IHAKHLSL-------LKSVHS-FGI------ 168
D T V+ ++ + I KH+ L L +H+ FG
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314
Query: 169 ---HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+G + N IS+Y + L +A +F + +R VVSWNSM+AG +
Sbjct: 315 IFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKR--DVVSWNSMIAGYAQNGES 372
Query: 226 DDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
S+ ++ M+ + D T+ S+LS+ AL V L +S N+
Sbjct: 373 AMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNS 432
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MYSKCG + A +F + R VS+ +ISG+A G EA++L ME G PD
Sbjct: 433 LIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPD 492
Query: 345 LVTVLSMISGCGQSGALELGK---------WFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
VT + +++ C +G L GK D+YAC ++D+ + G
Sbjct: 493 HVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYAC-------------MVDLLGRAGE 539
Query: 396 IGDARELFYALPEK 409
+ +A+ L ++P K
Sbjct: 540 LDEAKMLIQSMPMK 553
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/596 (29%), Positives = 294/596 (49%), Gaps = 19/596 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + + + +++ ++ + E + T P + K C +L Y Q +H ++
Sbjct: 220 WNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVI 279
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + +C + AY++F + DV +AM+ F + L
Sbjct: 280 KRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALD 339
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M +G++ + +G+ A +L +SVH++ + G V + ++ Y
Sbjct: 340 LFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYV 399
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K ++ A + F I E SWN++++ G + L ++ M GF + T
Sbjct: 400 KVGAVQDATVTFDLIHEP--DTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTY 457
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VS+L L G VH+ + G D V L+ MY++ G SA ++F+ + +
Sbjct: 458 VSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE 517
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R SWT ++SGYA+ + ++ + F +M P T+ +S C +L G
Sbjct: 518 RDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQL 577
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
++A G +V V AL+DMY KCG+I DA LF+ + V+W T+I G + +G
Sbjct: 578 HSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHG 636
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+ALD F Q+++ RP+ +TF+ VL AC+H G L +G GI+ P ++HY
Sbjct: 637 YKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGIT--PTMEHY 694
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+CM D+L + G+L EA + MP+ D+ IW T+L AC+IH NIEI E A LF+LEP
Sbjct: 695 ACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEP 754
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
H A+ + ++N YA GRW V +R ++ + VKK PG S ING+ F ++D
Sbjct: 755 HDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 224/536 (41%), Gaps = 43/536 (8%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W + I ++ + L +F +M Q I PN T + KAC+ S ++ +HG
Sbjct: 116 IVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHG 175
Query: 79 HIVK-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+VK P+V C LD A + + R SWNA+L G+A+ G
Sbjct: 176 QVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRR 235
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
V+ + + G + T+ + + + +SVH+ I G++ D + + +
Sbjct: 236 VMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVE 295
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y++C + A VF I+E VV ++M++ D ++L+ + M G + +
Sbjct: 296 MYSRCLSAEEAYEVFIRIDE--PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNH 353
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
V + R VH++ + GF + V + +++MY K G + A V FD
Sbjct: 354 YIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDL 413
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I + SW ++S + + ++ LR+F M G + T +S++ C L G
Sbjct: 414 IHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFG 473
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
GL+++ V L+DMY++ G A +F L E+ SWT +++G A
Sbjct: 474 TQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKT 533
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACT-----------HTGFLEKGWAISIIQY 473
E + ++ F ++ ++RP+ T L C+ H+ ++ GW S++
Sbjct: 534 EEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVS- 592
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ D+ + G + +A + D W T++C H
Sbjct: 593 --------------GALVDMYVKCGNIADAEMLFHESETR-DQVAWNTIICGYSQH 633
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 177/408 (43%), Gaps = 16/408 (3%)
Query: 64 CAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASW 109
CA L Q +H +++S + KC RL A ++FD M RD+ +W
Sbjct: 60 CAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAW 119
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
AM+ G + L +F M GI + T+ + +A H VH +
Sbjct: 120 TAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVK 179
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
+ D V ++ + +Y C +L AE V G+ E R+ VSWN+++ G + +
Sbjct: 180 LNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPE--RSDVSWNALLNGYARHGDYRRVM 237
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
++ +G + T+ ++L + G+ VH+ I G + D + + L+ MY
Sbjct: 238 IIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMY 297
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
S+C + A +F I + V +AMIS + + EAL LF M G P+ +
Sbjct: 298 SRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFV 357
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+ ++G L + Y G V +A+++MY K G++ DA F + E
Sbjct: 358 GIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEP 417
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
SW T+++ + L +F Q+ N+ T+++VL+ CT
Sbjct: 418 DTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCT 465
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 155/307 (50%), Gaps = 16/307 (5%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+ +H+ + + D + ++ ++ Y KC L A VF G+ R +V+W +M++ T
Sbjct: 70 QELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR--DIVAWTAMISAHT 127
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA-------LVQGRLVHSHGIHY 273
D +L+ + M G + T+ S+L + C V G++V +G+
Sbjct: 128 AAGDSDQALDMFARMNQEGIAPNGFTLASVLKA--CSGGSHSKFTHQVHGQVVKLNGLD- 184
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
D V ++L+ Y+ CG++D+A + G+ +R+ VSW A+++GYA+ GD + +
Sbjct: 185 ----DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIII 240
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ A+G+ T+ +++ C + G + G+ GL+ + ++ + L++MYS+C
Sbjct: 241 EKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRC 300
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
S +A E+F + E VV + MI+ + EALDLF ++ + ++PN F+ +
Sbjct: 301 LSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIA 360
Query: 454 QACTHTG 460
+ TG
Sbjct: 361 GVASRTG 367
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 125/248 (50%), Gaps = 7/248 (2%)
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L +G+ +H+ + D ++++L++MY KCG + AR +FDG+ R V+WTAMIS
Sbjct: 66 LRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISA 125
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+ GD D+AL +F M G P+ T+ S++ C + D+
Sbjct: 126 HTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDD 185
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V ++L++ Y+ CG + A + LPE+ VSW ++ G A +G++ + + +L+
Sbjct: 186 PYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVA 245
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRK 497
++ T VL+ C G + G ++ S+I+ +G+ + L+ SC+ ++ R
Sbjct: 246 SGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIK---RGLETDNVLN--SCLVEMYSRC 300
Query: 498 GKLKEALD 505
+EA +
Sbjct: 301 LSAEEAYE 308
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C L G+ L + + ++L++MY KCG + DAR +F +P + +V+W
Sbjct: 60 CAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAW 119
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC---THTGFLEK--GWAIS 469
T MI+ G+ +ALD+F ++ + + PN T +VL+AC +H+ F + G +
Sbjct: 120 TAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVK 179
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ DD + + + SC G+L A + +P +SD W LL
Sbjct: 180 LNGLDDPYVGSSLVEAYTSC--------GELDAAETVLLGLPERSDVS-WNALL 224
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 303/604 (50%), Gaps = 53/604 (8%)
Query: 71 IYSQMIHGHIVKSPFVK-------CDRL----DCAYKIFDEMAVRDVASWNAMLVGFAQM 119
++SQ I + +P + C RL AYK+F ++ DV WN M+ G++++
Sbjct: 53 LHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKV 112
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH-AKHLSLLKSVHSFGIHIGVDADVSV 178
+RL+ NM G+ D T L L+ K +H + G+ +++ V
Sbjct: 113 DCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYV 172
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRT-VVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
N + Y+ C + MA VF + R + V SWN M++G ++++S+ M
Sbjct: 173 QNALVKMYSLCGLMDMARGVF---DRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQG--RLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
N + T+V LL C + + + VH + + + + N L++ Y+ CG++
Sbjct: 230 N--LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 296 DSA-------------------------------RVLFDGICDRTRVSWTAMISGYAQKG 324
D A R FD + R R+SWT MI GY + G
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+E+L +F M++AG +PD T++S+++ C G+LE+G+W Y +K++V+V N
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALIDMY KCG A+++F+ + ++ +WT M+ G A NG+ EA+ +F Q+ ++ ++P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+ +T+L VL AC H+G +++ D I P L HY CM D+LGR G +KEA
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE--PSLVHYGCMVDMLGRAGLVKEAY 525
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ ++ MP+ ++ +WG LL A ++H + + E A + +LEP + A Y + N YA
Sbjct: 526 EILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCK 585
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
RW + +R + +KK PG SL +NG F A D+ H +SE Y L+ LA S
Sbjct: 586 RWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQEST 645
Query: 625 EEAY 628
AY
Sbjct: 646 FAAY 649
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 47/277 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I E +++ L +M++N + P ++T + AC+K+ D + +H ++
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE---- 123
+ + + C +D A +IF M RDV SW +++ G+ + G L+
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 124 ---------------------------NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
L +F M+ G+ D T++ + A H
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + + + ++ + DV V N I Y KC + A+ VF +++R + +W +MV
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDK--FTWTAMV 441
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
G + +++ + M + D T + +LS+
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 36 HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP----------- 84
+++L +FR+M+ + P+ T + ACA L L + I +I K+
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNAL 409
Query: 85 ---FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
+ KC + A K+F +M RD +W AM+VG A G + +++F+ M+ + IQ D
Sbjct: 410 IDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDD 469
Query: 142 VTVMGLTQAAIHA 154
+T +G+ A H+
Sbjct: 470 ITYLGVLSACNHS 482
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 297/614 (48%), Gaps = 19/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + T L M+++ ++ TF I K A + L Q +H ++
Sbjct: 62 WNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVML 121
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC R+D Y +F M R+ SWN ++ ++++G +
Sbjct: 122 KVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFW 181
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+ M L G++ D TV L +A L +H + G++ +VCN I++Y+
Sbjct: 182 VLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYS 241
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+C L+ AE VF G R +V+WNSM+ +K D + + M GF D T
Sbjct: 242 ECCSLQDAERVFDG-AVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTY 300
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARVLFDGI 305
++ + E G+ +H I G D V V N LISMY + D ++ A +F +
Sbjct: 301 TGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSM 360
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ +W ++++GY Q G ++ALRLF M D T ++I C L+LG+
Sbjct: 361 DLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQ 420
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
F A G N V ++LI MYSKCG I DAR+ F A + + W ++I G A +G
Sbjct: 421 QFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHG 480
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ ALDLF+ + E ++ + +TF+AVL AC+H G +E+G D GI P +
Sbjct: 481 QGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIP--PRQE 538
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C DL GR G LK+A V++MP + DA + TLL AC+ +IE+ +A L +L
Sbjct: 539 HYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLEL 598
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP YV ++ Y W A++ MM+ VKK PG S + F AED
Sbjct: 599 EPEEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKNNVHAFNAEDHS 658
Query: 606 HAESELTYPVLDCL 619
H + E Y +L L
Sbjct: 659 HPQCEEIYILLQQL 672
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 182/392 (46%), Gaps = 5/392 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ + KC L+ A+++FDEM RD SWNA++ FA G L+ +L MR D
Sbjct: 36 TSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSR 95
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + + + L L + +HS + +G+ +V + + YAKC + +VF +
Sbjct: 96 TFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSM 155
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R VSWN++VA + D + M G +D TV LL+
Sbjct: 156 PE--RNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLLDNAMFYKL 213
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG-ICDRTRVSWTAMISGYA 321
+H + +G +L +V N I+ YS+C + A +FDG + R V+W +M+ Y
Sbjct: 214 TMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYL 273
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
D A ++F M+ G PD T ++ C GK GL ++V
Sbjct: 274 MHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVP 333
Query: 382 VCNALIDMYSKCGS--IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V NALI MY + + DA +F+++ K +W +++AG G +AL LF Q+
Sbjct: 334 VSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRC 393
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
L + + TF AV+++C+ L+ G ++
Sbjct: 394 LVIEIDHYTFSAVIRSCSDLATLQLGQQFHVL 425
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 3/307 (0%)
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+H+ L L + H I +G AD N I+SYAKC +L A VF E R VS
Sbjct: 4 LHSLTLLGLIATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVF--DEMPHRDTVS 61
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN++++ D + M + D T S+L L G+ +HS +
Sbjct: 62 WNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVML 121
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
G +V + L+ MY+KCG +D V+F + +R VSW +++ Y++ GD D A
Sbjct: 122 KVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFW 181
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+ ME G D TV +++ + +L GL+ VCNA I YS
Sbjct: 182 VLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYS 241
Query: 392 KCGSIGDARELF-YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
+C S+ DA +F A+ + +V+W +M+ ++ + A +F + P+ T+
Sbjct: 242 ECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYT 301
Query: 451 AVLQACT 457
++ AC+
Sbjct: 302 GIVGACS 308
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/589 (29%), Positives = 302/589 (51%), Gaps = 29/589 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I+ V + ++ + +F++M+ + +P+ T I AC L + +HG+I+
Sbjct: 336 WNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDHGLLPEGKEVHGYII 394
Query: 82 KSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL-ENV 125
K ++KC+ A +F M +RD+ SWN M+ G+++ L E
Sbjct: 395 KKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEA 454
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+F + G+ TV+ + + + L+ KSVHSF + G VS N+ I
Sbjct: 455 KAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHM 514
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL--D 243
Y C D +A + ++SWN+ + GC + D+L ++ M++ L D
Sbjct: 515 YICCGD-SLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQ-FMHSTLTLNPD 572
Query: 244 VTTVVSLLSSFVCPEALVQ--GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T+VS+LS VC +Q G+ +H + + ++ V N L++MY + GD +SA ++
Sbjct: 573 SITLVSVLS--VCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELI 630
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + R SW MISG+AQ + A + + ME P+ ++++ +I C Q G L
Sbjct: 631 FSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKMEDFE--PNEISIVGIICACTQLGDL 688
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
GK + GL+ NV + +L+DMYSKCG + + +F + EK + W +MI+
Sbjct: 689 RQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAF 748
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+G ++++++F ++ ++ R TF+A+L AC+H+G ++G + + GI
Sbjct: 749 GFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPT 808
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
PE H+ C+ D+LGR G+L+EA FV+S+P K G+WG LL AC +++ E VA
Sbjct: 809 PE--HHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKH 866
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
L LEP ++ YV M+N YA W G +R +++ + K G+S+
Sbjct: 867 LLCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSII 915
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 215/443 (48%), Gaps = 22/443 (4%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FDE A D+ WNA + + + LF M V D +++ + A
Sbjct: 117 ALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASR 176
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVS 211
A+ L + H + +D D+S+ NT + YAKC D +E+VF +R+ R S
Sbjct: 177 ARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVF----QRMPYRDTTS 232
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ-GRLVHSHG 270
WNSMV+G + + S +++ M+ + F+ D ++ +LS+ + L G VHS
Sbjct: 233 WNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSV 292
Query: 271 IHYGF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I G+ D SV N+LI+ Y + G ++A +F ++ V+W AMI G + ++EA
Sbjct: 293 IKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEA 352
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALID 388
+ +F M + + PD+ T++++IS CG G L GK Y G + + V N+L+D
Sbjct: 353 MCMFQEMRSKNQ-PDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLD 411
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF-VEALDLFHQLMELDLRPNRV 447
+Y KC AR LF +P + ++SW TMI+G + N EA +F L+ L
Sbjct: 412 LYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLS 471
Query: 448 TFLAVLQACTHTGFLEKGWAIS--IIQYDD-KGISYNPELDH-YSCMADLLGRKGKLKEA 503
T +AV+ +C L G ++ I++Y G+S L H Y C D L A
Sbjct: 472 TVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLA-------A 524
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
++S+ SD W T + C
Sbjct: 525 FSLLESITPISDIISWNTAIVGC 547
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 193/391 (49%), Gaps = 11/391 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC + +F M RD SWN+M+ G G E F M QAD V++
Sbjct: 209 YAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSL 268
Query: 145 MGLTQAAIHAKHL-SLLKSVHSFGIHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ A H K L S +SVHS I +G D SV N+ I+ Y + + AE VF
Sbjct: 269 SCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLST 328
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+ +V+WN+M+ G D+ ++++ ++ M + DV T+V+++S+ L +
Sbjct: 329 SN--KNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDHGLLPE 385
Query: 263 GRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G+ VH + I G + SV N+L+ +Y KC D +AR+LF + R +SW MISGY+
Sbjct: 386 GKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYS 445
Query: 322 QKGDL-DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+ L +EA +F + + G L TV+++I C L GK ++ G V
Sbjct: 446 RNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGV 505
Query: 381 MVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
N+LI MY CG A L ++ P ++SW T I GC NG + +AL+ F Q M
Sbjct: 506 SAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAF-QFMH 564
Query: 440 --LDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
L L P+ +T ++VL C + G +I
Sbjct: 565 STLTLNPDSITLVSVLSVCGNLKLQSLGKSI 595
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 171/368 (46%), Gaps = 12/368 (3%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+ ++H + G D V + I++Y++ D+ A VF E ++ WN+ ++
Sbjct: 82 VAALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVF--DEAAAPDLILWNAAISAL 139
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
T ++ D++ +R M+ +D T++V +LS +L G H + D D+
Sbjct: 140 TLNCRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDL 199
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
S+ NTL+ MY+KCGD S+ V+F + R SW +M+SG G + + F M +
Sbjct: 200 SLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRS 259
Query: 340 GELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNV-MVCNALIDMYSKCGSIG 397
D V++ ++S C L G+ + G +D V N+LI Y + G
Sbjct: 260 SFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPE 319
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
A E+F + K +V+W MI G N EA+ +F ++ + +P+ T + ++ AC
Sbjct: 320 AAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACG 378
Query: 458 HTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
G L +G + II+ KG Y E + + DL + A ++MP++ D
Sbjct: 379 DHGLLPEGKEVHGYIIK---KGHIYE-ECSVGNSLLDLYMKCNDPSTARILFRTMPMR-D 433
Query: 516 AGIWGTLL 523
W T++
Sbjct: 434 LISWNTMI 441
>gi|297823227|ref|XP_002879496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325335|gb|EFH55755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 617
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 291/584 (49%), Gaps = 26/584 (4%)
Query: 41 LFRQMKQNDIEPNNLT----------FPFIAKACAKLSDL--IYSQMIHGHIVKSPF--- 85
++RQ + + +P L F F+ K C ++ L I +QM+ + K F
Sbjct: 11 IYRQFQFSQFKPRQLEEARRGDLERGFLFLLKKCISVNQLREIQAQMLLHSVEKPNFLIP 70
Query: 86 --VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM-GFLENVLRLFYNMRLVGIQADFV 142
V+ + A + + S+N M+ G + E L L+ M+ G++ D
Sbjct: 71 KAVELGDFNYASFLLSVTEEPNHYSFNYMIRGLTNIWNDHEGALSLYRRMKYSGLKPDNF 130
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + A + + + +SVHS +G++ D + ++ I YAKC + A VF I
Sbjct: 131 TYNFVFIACGKREEIGVGRSVHSSLFKVGLERDDHISHSLIMMYAKCGLVGYARKVFDEI 190
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
+R+ VSWNSM++G + + D+++ +R M GF D T+VS+L + L
Sbjct: 191 TDRV--TVSWNSMISGYSEAGRAKDAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDLTT 248
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GRL+ I L + + LI+MY KCGD+DSAR +F+ + + RV+W AMI+ Y+Q
Sbjct: 249 GRLLEKMAITKKIGLSTFLGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQ 308
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G EA +LFF ME G PD T+ +++S CG GALELGK + +A L+ N+ V
Sbjct: 309 NGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKRIETHASEISLQHNIYV 368
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
L+DMY KCG I +A +F A+P K +W MI A G EAL LF Q + +
Sbjct: 369 ATGLVDMYGKCGHIEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDQ---MPV 425
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
P+ VTF+ VL AC H G +++G P+++HY+ + DLL R G L E
Sbjct: 426 PPSDVTFIGVLSACVHAGLVDQG--CRYFHEMSSLFGLVPKIEHYTNIIDLLSRAGLLDE 483
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL-EPHSAAPYVEMANKYA 561
A +F++ P K D + +L AC ++ I E L ++ E +A YV + A
Sbjct: 484 AWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSKVLA 543
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
WD A +R +M+ V K PG S ING+ F A Y
Sbjct: 544 DMKMWDESAKMRALMRDRGVVKTPGCSWIEINGELMEFLAGSDY 587
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 190/404 (47%), Gaps = 21/404 (5%)
Query: 22 WNSQIREAVNK-NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N IR N N+ L L+R+MK + ++P+N T+ F+ AC K ++ + +H +
Sbjct: 96 FNYMIRGLTNIWNDHEGALSLYRRMKYSGLKPDNFTYNFVFIACGKREEIGVGRSVHSSL 155
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + KC + A K+FDE+ R SWN+M+ G+++ G ++ +
Sbjct: 156 FKVGLERDDHISHSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYSEAGRAKDAM 215
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M G + D T++ + A H L+ + + I + + + I+ Y
Sbjct: 216 DLFRKMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLSTFLGSKLITMY 275
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC DL A VF + ++ R V+WN+M+ + K ++ + M G D T
Sbjct: 276 GKCGDLDSARRVFNQMIKKDR--VAWNAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 333
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++LS+ AL G+ + +H ++ V L+ MY KCG I+ A +F+ +
Sbjct: 334 LSTVLSACGSVGALELGKRIETHASEISLQHNIYVATGLVDMYGKCGHIEEALRVFEAMP 393
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ +W AMI+ YA +G EAL LF M P VT + ++S C +G ++ G +
Sbjct: 394 VKNEATWNAMITAYAHQGHAKEALLLFDQMPVP---PSDVTFIGVLSACVHAGLVDQGCR 450
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+F + GL + +ID+ S+ G + +A E P K
Sbjct: 451 YFHEMSSLFGLVPKIEHYTNIIDLLSRAGLLDEAWEFMERFPGK 494
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 243/450 (54%), Gaps = 33/450 (7%)
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V WN++++G +F+ S + M+ T VS+LS+ + L+ G VH
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI--------------------CDRT 309
+ G D V N L+ MY++CGD+D+A VLF+G+ DR
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 310 R-----------VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R ++WTAMI GY Q G +AL F M+ D T++S+++ C Q
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
GALE G+W Y G+K +V V NALIDMYSKCGSI A ++F + + +WT +I
Sbjct: 307 GALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAII 366
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
G A+NG EA+D+F++++ P+ VTF+ VL ACTH G ++KG + + I
Sbjct: 367 LGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNI 426
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
S P + HY C+ D+LGR GKLKEALD + MP+K ++ IWGTLL +C+++ N EIGE
Sbjct: 427 S--PTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELA 484
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +L+P ++ Y+ ++N YA RW V IR ++ +KK PG S+ +NG
Sbjct: 485 AERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHE 544
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAY 628
F A DR H ++ Y L+ + R Y
Sbjct: 545 FVAADRSHPMNKEIYSKLENVLTDLRNAGY 574
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 167/364 (45%), Gaps = 31/364 (8%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
WNA++ G + G E F +M A VT + + A K L L VH +
Sbjct: 129 WNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVL 188
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL---------------------- 206
GV D V N + YA+C D+ A ++F G++ R
Sbjct: 189 ESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARD 248
Query: 207 -------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
R ++W +M+ G +F D+L +R+M R D T+VS++++ A
Sbjct: 249 LFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGA 308
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L G + G +DV V N LI MYSKCG I+ A +F + +R + +WTA+I G
Sbjct: 309 LETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILG 368
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKD 378
A G +EA+ +F+ M A + PD VT + +++ C +G ++ G+ +F + + +
Sbjct: 369 LAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISP 428
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQL 437
V+ LID+ + G + +A + +P K + W T++A C + G +L
Sbjct: 429 TVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERL 488
Query: 438 MELD 441
+ELD
Sbjct: 489 LELD 492
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
V S V+ ++D A +FD M RD +W AM+ G+ Q+G + L F M++ ++AD
Sbjct: 233 VISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRAD 292
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T++ + A L + + +G+ DV V N I Y+KC ++ A VF
Sbjct: 293 EFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFK 352
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ R + +W +++ G + +++++ + M+ D T V +L++ +
Sbjct: 353 DMHNRDK--FTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLV 410
Query: 261 VQGR-----LVHSHGI-----HYGFDLDV 279
+GR + ++ I HYG +DV
Sbjct: 411 DKGREFFLSMTEAYNISPTVVHYGCLIDV 439
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
W + I V L FR M+ + + T + ACA+L L
Sbjct: 261 WTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMG 320
Query: 71 ---IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
I + G+ + + KC ++ A +F +M RD +W A+++G A G E +
Sbjct: 321 RLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAID 380
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
+FY M D VT +G+ A HA
Sbjct: 381 MFYRMLRALQTPDEVTFVGVLTACTHA 407
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 240/453 (52%), Gaps = 34/453 (7%)
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V SWNS++A ++L + M + + +T + S L GR H
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ +GF+ D+ V + L+ MYSKCG++ AR LFD I R VSWT+MI+GY Q D
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159
Query: 328 EALRLFFAMEAA-------------------------------GELP-DLVTVLSMISGC 355
ALR+F M GE+ + VT+ +++ C
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
SG+ LGK + GL+ NV V ++IDMY KCG + AR+ F + EK V SW+
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 279
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
M+AG ++G EAL++F+++ ++PN +TF++VL AC+H G LE+GW +
Sbjct: 280 AMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW--HWFKAMS 337
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
P ++HY CM DLLGR G LKEA D ++ M ++ D +WG LL AC++H N+++G
Sbjct: 338 HEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLG 397
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
E A LF+L+P + YV ++N YA GRW+ V +R +MK + + K PG SL I G+
Sbjct: 398 EISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGR 457
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F DR H + E Y L+ L++ +E Y
Sbjct: 458 VHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 490
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 36/371 (9%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
+V SWN+++ A+ G LR F +MR + ++ + T ++ L + H
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER------------------- 205
+ G + D+ V + + Y+KC +L+ A +F I R
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159
Query: 206 ----------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSF 254
R V+SWNS++A +S+ + M+ +G + T+ ++L +
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
+ G+ +H I G + +V V ++I MY KCG ++ AR FD + ++ SW+
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 279
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACS 373
AM++GY G EAL +F+ M AG P+ +T +S+++ C +G LE G WF +
Sbjct: 280 AMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHE 339
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIAGCALNGEFVEA 430
++ V ++D+ + G + +A +L + P+ +V W ++ C ++
Sbjct: 340 FDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVV--WGALLGACRMHKNVDLG 397
Query: 431 LDLFHQLMELD 441
+L ELD
Sbjct: 398 EISARKLFELD 408
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 162/373 (43%), Gaps = 54/373 (14%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L N+ + + WNS I E ++ + L F M++ ++PN TFP K+C
Sbjct: 27 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 86
Query: 65 AKLSDL----------------------------------------IYSQMIHGHIVK-- 82
+ L DL ++ ++ H +IV
Sbjct: 87 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 146
Query: 83 ---SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQ 138
+ +V+ D A ++FD MA RDV SWN+++ +AQ G + +F+ M G I
Sbjct: 147 SMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 206
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ VT+ + A H+ L K +H I +G++++V V + I Y KC ++MA
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 266
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F + E + V SW++MVAG ++L + M G + + T VS+L++ C
Sbjct: 267 FDRMRE--KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAA--CSH 322
Query: 259 A-LVQGRLVHSHGIHYGFDLDVSV--INTLISMYSKCGDIDSARVLFDGICDRTR-VSWT 314
A L++ + + FD++ V ++ + + G + A L G+ R V W
Sbjct: 323 AGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWG 382
Query: 315 AMISGYAQKGDLD 327
A++ ++D
Sbjct: 383 ALLGACRMHKNVD 395
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 47/268 (17%)
Query: 300 VLFDGICDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
LF+ D+T V SW ++I+ A+ GD EALR F +M P+ T I C
Sbjct: 30 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
L G+ A G + ++ V +AL+DMYSKCG + DAR LF + + +VSWT+MI
Sbjct: 90 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149
Query: 419 AG-------------------------------CALNGEFVEALDLFHQLM-ELDLRPNR 446
G A NG E++++FH+++ + ++ N
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKL---K 501
VT AVL AC H+G G I D+ I E + + + + D+ + GK+ +
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIH-----DQVIKMGLESNVFVGTSIIDMYCKCGKVEMAR 264
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIH 529
+A D ++ +KS W ++ +H
Sbjct: 265 KAFDRMREKNVKS----WSAMVAGYGMH 288
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 267/528 (50%), Gaps = 6/528 (1%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
+N M+ G N + L+ +M I D T + +A L +HS
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
G D DV V + Y+KC L+ A VF + ++ VVSW M+ GC KF ++
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVF--DDMVVKNVVSWTGMICGCIEFGKFREA 189
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
++ +R ++ +G R D +V +L + L GR + G +V V +L+ M
Sbjct: 190 VDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDM 249
Query: 289 YSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTV 348
Y+KCG ++ AR +FDG+ ++ V W+AMI GYA G EA+ LFF M PD +
Sbjct: 250 YTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAM 309
Query: 349 LSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE 408
+ +S C GALELG W N ++ +LID Y+KCGS+ +A ++ + E
Sbjct: 310 VGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKE 369
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA- 467
K V + +I+G A+ G+ A +F Q+ + + PN TF+ +L CTH G ++ G
Sbjct: 370 KDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHY 429
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ + +D S P ++HY CM DLL R G L EA + ++ MP+K++ +WG+LL C+
Sbjct: 430 FNSMSHD---FSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCR 486
Query: 528 IHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQ 587
+H ++ E+V L +LEP ++ YV ++N Y+ RWD IR+ + ++K PG
Sbjct: 487 LHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGY 546
Query: 588 SLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
S ++G F D H S+ Y L+ L +E Y+ +++
Sbjct: 547 SWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFV 594
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 207/436 (47%), Gaps = 18/436 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ IR V+K+ + + L+ M + I P++ TF F+ KACA+L+ MIH +
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ F KC L A+K+FD+M V++V SW M+ G + G +
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + G++ D ++ + +A L + + G+ +V V + + Y
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYT 251
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A VF G+ E + +V W++M+ G +++ + M R D +
Sbjct: 252 KCGSMEEARFVFDGMVE--KDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAM 309
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V LSS AL G + F + + +LI Y+KCG ++ A ++ + +
Sbjct: 310 VGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKE 369
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-W 366
+ RV + A+ISG A G + A +F M G P+ T + ++ GC +G ++ G+ +
Sbjct: 370 KDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHY 429
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNG 425
F++ + + + ++D+ ++ G + +A L +P K V+ W +++ GC L+
Sbjct: 430 FNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHR 489
Query: 426 EFVEALDLFHQLMELD 441
E A + QL+EL+
Sbjct: 490 ETQLAEHVLKQLIELE 505
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 283/557 (50%), Gaps = 21/557 (3%)
Query: 79 HIVKSPFVK-CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
+++KS F K R C +F+E+ RDV +W AM+VGF +F M +
Sbjct: 48 NLIKSYFDKGLTREAC--NLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA-KCDDLKMAE 196
Q + T+ + +A K LS HS G+D V V N + YA C + A
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTY-GDKFDDSLNFYRHMMY----NGFRLDVTT-VVSL 250
VF I L+T VSW +++AG T+ GD + L F + ++ N F + +
Sbjct: 166 SVFNDIP--LKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACAS 223
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
+SS+ C G+ +H+ YG D V+N+++ MY +C + A+ F + ++
Sbjct: 224 ISSYSC------GKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNL 277
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
++W +I+GY ++ D E+L LFF M + G P+ T S+ + C L G+
Sbjct: 278 ITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGG 336
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
G NV + N+LIDMY+KCGSI D+ +LF +P + +VSWTTM+ G +G EA
Sbjct: 337 IVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEA 396
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
+ LF ++++ ++P+R+ F+ VL C+H G ++KG +D I NP+ + Y C+
Sbjct: 397 VKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNI--NPDQEIYRCV 454
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSA 550
DLLGR G+++EA V++MP + D +WG LL ACK + +G A + P+ A
Sbjct: 455 VDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMA 514
Query: 551 APYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
Y+ ++ YA G+W A +R +MK KK G+S I + +F + E
Sbjct: 515 GTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIE 574
Query: 611 LTYPVLDCLALHSREEA 627
+ V+D L H +++
Sbjct: 575 WVHKVIDVLIWHMKDDG 591
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 203/441 (46%), Gaps = 22/441 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
W + I + N H+ +F +M +++++PN T + KAC + L + H
Sbjct: 77 WTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLAT 136
Query: 79 --HIVKSPFVK----------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
I +S +V+ C +D A +F+++ ++ SW ++ GF G + L
Sbjct: 137 KHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGL 196
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M L + + + +A S K +H+ G+ D V N+ + Y
Sbjct: 197 LAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMY 256
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C+ L A+ F + E + +++WN+++AG D +SL+ + M G++ + T
Sbjct: 257 CRCNYLCDAKRCFGELTE--KNLITWNTLIAGYERSDS-SESLSLFFQMGSEGYKPNCFT 313
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S+ ++ L G+ VH + GFD +V++IN+LI MY+KCG I + LF +
Sbjct: 314 FTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMP 373
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
R VSWT M+ GY G EA++LF M +G PD + + ++ GC +G ++ G K
Sbjct: 374 GRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLK 433
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+F + + + + ++D+ + G + +A +L +P E W ++ C
Sbjct: 434 YFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGAC--K 491
Query: 425 GEFVEALDLFHQLMELDLRPN 445
+ L LD RPN
Sbjct: 492 AYKLSNLGNLAAQRVLDRRPN 512
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 22/305 (7%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T W + I ++ + + LL FRQM D+ PN+ +F A+ACA +S + IH
Sbjct: 175 TAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIH 234
Query: 78 GHIVK------SP--------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ K +P + +C+ L A + F E+ +++ +WN ++ G+ + E
Sbjct: 235 AAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSE 294
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ L LF+ M G + + T +T A + LS + VH + G D +V++ N+ I
Sbjct: 295 S-LSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLI 353
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC + + +FC + R +VSW +M+ G +++ + M+ +G + D
Sbjct: 354 DMYAKCGSISDSHKLFCDMPG--RDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPD 411
Query: 244 VTTVVSLLSSFVCPEA-LVQGRLVHSHGI--HYGFDLDVSVINTLISMYSKCGDIDSARV 300
+ +L C A LV L + + Y + D + ++ + + G ++ A
Sbjct: 412 RIVFMGVLCG--CSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQ 469
Query: 301 LFDGI 305
L + +
Sbjct: 470 LVENM 474
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 256/488 (52%), Gaps = 9/488 (1%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L Q+ + K + K +H+ +G+ + + ++ Y C+ L A L+F I +R
Sbjct: 7 LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR- 65
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ WN M+ G + ++ +++ Y M G D T +L + A+ +G+ +
Sbjct: 66 -NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H I G + DV V LI MY+KCG ++SAR +FD I +R V W +M++ Y+Q G
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
DE+L L M G P T + I+ +G L GK Y+ G + N V AL
Sbjct: 185 DESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTAL 244
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+K GS+ AR LF L EK VVSW MI G A++G EALDLF + M+ + P+
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKE-MKGKVLPDH 303
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEAL 504
+TF+ VL AC+H G L +G + + +N P + HY+CM DLLG G+L+EA
Sbjct: 304 ITFVGVLAACSHGGLLNEG----KMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
+ M ++ DAG+WG LL +CKIH N+E+GE L +LEP YV ++N YA G
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAG 419
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
+WDGVA +R +M +KK S + K F +ED H +SE Y L +
Sbjct: 420 KWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMK 479
Query: 625 EEAYSSHL 632
E Y+ +
Sbjct: 480 EAGYAPQV 487
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 194/394 (49%), Gaps = 11/394 (2%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASW 109
IEP I + + L+ +++++ + + C+ L A+ +FD ++ R++ W
Sbjct: 17 IEPGKQLHARICQVGISFNPLLATKLVNLYCI------CNSLTNAHLLFDRISKRNLFLW 70
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
N M+ G+A G E + L+Y MR G+ D T + +A + K +H I
Sbjct: 71 NVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIR 130
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G+++DV V I YAKC ++ A VF I+E R VV WNSM+A + + D+SL
Sbjct: 131 SGLESDVFVGAALIDMYAKCGCVESARQVFDKIDE--RDVVCWNSMLATYSQNGQPDESL 188
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
R M +NG + T V +++ L QG+ +H + +GF+ + V L+ MY
Sbjct: 189 ALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMY 248
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+K G ++ AR LF+ + ++ VSW AMI+GYA G +EAL LF M+ LPD +T +
Sbjct: 249 AKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPDHITFV 307
Query: 350 SMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP- 407
+++ C G L GK F + + V +ID+ CG + +A +L +
Sbjct: 308 GVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRV 367
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
E W ++ C ++G +L+EL+
Sbjct: 368 EPDAGVWGALLHSCKIHGNVEMGELALEKLVELE 401
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 111/217 (51%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
SLL S V +A+ G+ +H+ G + + L+++Y C + +A +LFD I R
Sbjct: 6 SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
W MI GYA G + A+ L++ M G +PD T ++ C A+E GK
Sbjct: 66 NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
GL+ +V V ALIDMY+KCG + AR++F + E+ VV W +M+A + NG+
Sbjct: 126 KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPD 185
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
E+L L + L+P TF+ + A G L +G
Sbjct: 186 ESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQG 222
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 52/359 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR + L+ QM+ + P+ TFPF+ KAC+ LS + + IH ++
Sbjct: 70 WNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVI 129
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+S + KC ++ A ++FD++ RDV WN+ML ++Q G + L
Sbjct: 130 RSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLA 189
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L M G++ T + A+ L K +H + G +++ V + YA
Sbjct: 190 LCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYA 249
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTT 246
K + +A +F +EE + VVSWN+M+ G +++L+ ++ M G L D T
Sbjct: 250 KSGSVNVARSLFELLEE--KRVVSWNAMITGYAMHGHANEALDLFKEM--KGKVLPDHIT 305
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V +L+ A G L++ +H+ ++IS ++ +
Sbjct: 306 FVGVLA------ACSHGGLLNEGKMHF---------RSMISDFNIWPTVQ---------- 340
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+T MI G L+EA +L M PD +++ C G +E+G+
Sbjct: 341 -----HYTCMIDLLGHCGRLEEAYKLIMEMRVE---PDAGVWGALLHSCKIHGNVEMGE 391
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 17/120 (14%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK--- 66
L + + WN+ I A++ L LF++MK + P+++TF + AC+
Sbjct: 260 LFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-GKVLPDHITFVGVLAACSHGGL 318
Query: 67 -----------LSDL-IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVR-DVASWNAML 113
+SD I+ + H + C RL+ AYK+ EM V D W A+L
Sbjct: 319 LNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALL 378
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 247/450 (54%), Gaps = 46/450 (10%)
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA---LVQGR 264
T V+WN++++G G +F +S + M G T VS+LS+ C + ++ G
Sbjct: 86 TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSA--CGKGTRDVLLGM 143
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGD------------------------------ 294
VH + G D+ V N L+ MY++C D
Sbjct: 144 QVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLG 203
Query: 295 -IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+D AR LFD + +R VSWTAMI GY EAL +F M+ + D T++S+I+
Sbjct: 204 QVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVIT 263
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C Q GALE+G+W Y G+K + V NALIDMYSKCGSI A ++F + + +
Sbjct: 264 ACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFT 323
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISII 471
WT +I G A+NG EA+++FH+++ + P+ VTF+ VL ACTH G ++KG + +S+I
Sbjct: 324 WTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMI 383
Query: 472 QYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ +YN P + HY C+ DLLGR GK+ EALD + MP+ ++ IWGTLL AC++H
Sbjct: 384 E------AYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVH 437
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N EIGE VA L +L+P ++ Y+ ++N YA RW+ V +R + +KK PG SL
Sbjct: 438 GNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSL 497
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCL 619
++G F A D+ H S+ Y L+ +
Sbjct: 498 IEMDGIIHEFVAGDQSHPMSKEIYSKLESI 527
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/434 (19%), Positives = 157/434 (36%), Gaps = 82/434 (18%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK-LSDLIYSQMIHGHI 80
WN+ I ++ F M + P +T+ + AC K D++ +HG +
Sbjct: 90 WNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRV 149
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVR---------------------- 104
V S + +C + A+K+FD M VR
Sbjct: 150 VGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEAR 209
Query: 105 ---------DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
D SW AM+ G+ L +F M+ + AD T++ + A
Sbjct: 210 DLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLG 269
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L + + V + G+ D V N I Y+KC ++ A VF G+ R + +W ++
Sbjct: 270 ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDK--FTWTAI 327
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
+ G ++++ + M+ D T + +L++ + +GR
Sbjct: 328 ILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGR----------- 376
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
++I Y+ ++ V + +I + G + EAL
Sbjct: 377 ----EFFLSMIEAYNIAPNV---------------VHYGCIIDLLGRAGKITEALDTIDQ 417
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M P+ ++++ C G E+G+ +N MV L ++Y+KC
Sbjct: 418 MPMT---PNSTIWGTLLAACRVHGNSEIGELVAERLLELD-PENSMVYILLSNIYAKCNR 473
Query: 396 IGDARELFYALPEK 409
D R L +A+ EK
Sbjct: 474 WEDVRRLRHAIMEK 487
>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
Length = 495
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 265/481 (55%), Gaps = 4/481 (0%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+ + + + KC ++ A + F+ M R+V SW+ M+ +AQ G + L LF M G+
Sbjct: 13 GNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGV 72
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ + VT + + A +A+ + + +H +D + V + Y KC L A
Sbjct: 73 EPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEARQ 132
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF GI E+ VV+W++M++ +++ + +M +G R + ++S+L +
Sbjct: 133 VFDGIVEK--DVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSA 190
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
AL +G++ H + GF DVS NTLI MY KCGD+ SA+ +F G+ R +SW+AM+
Sbjct: 191 GALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAML 250
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ A+ G +A F M+ G PD VT +S++ C GAL G + G +
Sbjct: 251 AVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQ 310
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ + N+LIDMY KCGS+ ARE+F + + V++WTTMI C + + EAL+LF ++
Sbjct: 311 SVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM 370
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++P++V FL+++ +C+H+G +E+G + +D+ S+ P ++H+ M DLLGR
Sbjct: 371 EKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQ--SFTPGVEHFVGMLDLLGRS 428
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
GKL EA + ++ MP++ W TLL ACK H + E VA + L P A PYV +
Sbjct: 429 GKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYVSFS 488
Query: 558 N 558
N
Sbjct: 489 N 489
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 219/420 (52%), Gaps = 26/420 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W++ + + + + L+LF++M++ +EPN +TF + ACA + +MIH
Sbjct: 44 WSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLVA 103
Query: 78 ------GHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G IV + V KC RL A ++FD + +DV +W+ M+ +AQ+G + ++
Sbjct: 104 RKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQ 163
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M L G++ + + +M + A A L+ K H + G ADVS NT I Y
Sbjct: 164 LFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYG 223
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A+ VF G+E R ++SW++M+A D+ +R M G + D T
Sbjct: 224 KCGDLASAKAVFGGMER--RDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTF 281
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VSLL + ALV+G ++H+ GF + + N+LI MY KCG + +AR +FD +
Sbjct: 282 VSLLDACSLLGALVEGHVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAAREIFDRMSH 341
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R ++WT MI+ Q EAL LF ME AG PD V LS+I C SG +E G+ +
Sbjct: 342 RNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIY 401
Query: 368 -----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
++ + + G++ V ++D+ + G + +A EL +P E VV W T+++ C
Sbjct: 402 FLKMVEDQSFTPGVEHFV----GMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSAC 457
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 4/144 (2%)
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N+L++MY KCG + +ARE F ++ + V+SW+TM+A A G+ +AL LF ++ E
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+ PN VTFL+VL AC + +E+G I + K + L + + + G+ +L
Sbjct: 72 VEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKK---LDVGLIVGTALVGMYGKCSRLI 128
Query: 502 EALDFVQSMPIKSDAGIWGTLLCA 525
EA + ++ D W T++ A
Sbjct: 129 EARQVFDGI-VEKDVVTWSTMISA 151
>gi|242035545|ref|XP_002465167.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
gi|241919021|gb|EER92165.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
Length = 564
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 270/501 (53%), Gaps = 18/501 (3%)
Query: 48 NDIEPNNLTFPFIAKA------------CAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAY 95
+ + P++ TFP + +A CA L++ + + +++ R+ AY
Sbjct: 63 HPLRPDSFTFPPLVRAAPGPASAAQFHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAY 122
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++FDEM RDV +WNAML G + + + LF M G+ D VT+ + +
Sbjct: 123 RVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLLG 182
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+L +H + + G+ ++ VCN I Y K L A VF G+ LR +V+WNS+
Sbjct: 183 DRALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMA--LRDLVTWNSI 240
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
++ G K ++ + MM +G DV T+VSL S+ + VH + G+
Sbjct: 241 ISAYEQGGKVAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGW 300
Query: 276 DL-DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
D+ D+ N ++ MY+K ID+A+++FD + DR VSW +I+GY Q G +EA+R++
Sbjct: 301 DVGDIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYN 360
Query: 335 AMEA-AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M+ G P T +S++ GAL+ G + GL +V V LID+Y+KC
Sbjct: 361 DMQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLYAKC 420
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + +A LF +P + W +IAG ++G +AL+LF Q+ + ++P+ VTF+++L
Sbjct: 421 GKLVEAMLLFEHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQQEGIKPDNVTFVSLL 480
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G +++G + + GI P HY+CM D+LGR G+L EA +F+Q MPIK
Sbjct: 481 AACSHAGLVDQGRSFFDLMQTVYGIV--PIAKHYACMVDMLGRAGQLDEAFEFIQGMPIK 538
Query: 514 SDAGIWGTLLCACKIHLNIEI 534
D+ +WG LL AC+IH N+E+
Sbjct: 539 PDSAVWGALLGACRIHGNVEL 559
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 304/558 (54%), Gaps = 18/558 (3%)
Query: 73 SQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG-FLENVLRLFYN 131
S ++ G+ + + + A ++FDEM +D+ SWN++L G +Q G F + +F +
Sbjct: 132 SDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRD 191
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M G++ D V+ + H L L + +H I G ++ + V N +S Y+KC
Sbjct: 192 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 251
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
L+ + VF + ER VVSW +M++ DD+++ + +M +G + T V LL
Sbjct: 252 LEAVKSVFYQMSER--NVVSWTTMIS-----SNRDDAVSIFLNMRLDGVYPNEVTFVGLL 304
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
++ C E + +G +H I GF + SV N+ I+MY+K ++ A+ FD I R +
Sbjct: 305 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREII 364
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG--QSGALELGKWFDN 369
SW AMISG+AQ G EAL++F + A +P+ T S+++ + +++ G+
Sbjct: 365 SWNAMISGFAQNGFSHEALKMFLSATAE-TMPNEYTFGSVLNAIAFAEDISVKHGQRCHA 423
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+ GL +V +AL+DMY+K G+I ++ ++F + ++ WT++I+ + +G+F
Sbjct: 424 HLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNS 483
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
++LFH++++ ++ P+ VTFL+VL AC G ++KG I + +D + P +HYSC
Sbjct: 484 VMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLE--PSHEHYSC 541
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
M D+LGR G+LKEA + + +P + ++L +C++H N+++G VA +++P
Sbjct: 542 MVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPEL 601
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT-----FTAEDR 604
+ YV+M N YA +WD A IR M++ V K G S + + F++ D+
Sbjct: 602 SGSYVQMYNIYAEKEQWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDK 661
Query: 605 YHAESELTYPVLDCLALH 622
H +S+ Y +++ + L
Sbjct: 662 SHPKSDEIYRMVEIVGLE 679
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 205/427 (48%), Gaps = 35/427 (8%)
Query: 22 WNSQIREAVNKNE-AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WNS + + + +L+FR M + +E ++++F + C +DL ++ IH
Sbjct: 168 WNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 227
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G+I+ S + KC L+ +F +M+ R+V SW M+ ++ +
Sbjct: 228 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMISSNR-----DDAV 282
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F NMRL G+ + VT +GL A + + +H I G ++ SV N++I+ Y
Sbjct: 283 SIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMY 342
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY----RHMMYNGFRL 242
AK + L+ A+ F I R ++SWN+M++G ++L + M N +
Sbjct: 343 AKFEALEDAKKAFDDI--TFREIISWNAMISGFAQNGFSHEALKMFLSATAETMPNEY-- 398
Query: 243 DVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
T S+L++ E ++ G+ H+H + G + V + L+ MY+K G+I+ +
Sbjct: 399 ---TFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEK 455
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + R + WT++IS Y+ GD + + LF M PDLVT LS+++ C + G
Sbjct: 456 VFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGM 515
Query: 361 LELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW-TTMI 418
++ G N L+ + + ++DM + G + +A EL +P S +M+
Sbjct: 516 VDKGHEILNMMIEDYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSML 575
Query: 419 AGCALNG 425
C L+G
Sbjct: 576 GSCRLHG 582
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 214/452 (47%), Gaps = 26/452 (5%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K R D A IF+ + DV SWN +L GF + L M+ G+ D T
Sbjct: 46 YRKAGRFDNALYIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTY 102
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ ++ L + S + G+++D+ V N++I+ Y++ + A VF E
Sbjct: 103 STALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVF--DEM 160
Query: 205 RLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+ ++SWNS+++G + F +++ +R MM G LD + S++++ L
Sbjct: 161 PFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLA 220
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H I G++ + V N L+S YSKCG +++ + +F + +R VSWT MIS
Sbjct: 221 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMIS----- 275
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+ D+A+ +F M G P+ VT + +++ + ++ G G V
Sbjct: 276 SNRDDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG 335
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
N+ I MY+K ++ DA++ F + + ++SW MI+G A NG EAL +F +
Sbjct: 336 NSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATA-ETM 394
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC------MADLLGRK 497
PN TF +VL A F E IS +++ + ++ +L SC + D+ ++
Sbjct: 395 PNEYTFGSVLNA---IAFAED---IS-VKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKR 447
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
G + E+ M + + +W +++ A H
Sbjct: 448 GNINESEKVFNEMS-QRNQFVWTSIISAYSSH 478
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 17/310 (5%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H F G + V V N + Y K A +F + + VVSWN++++G
Sbjct: 23 IHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDP--DVVSWNTILSG---- 76
Query: 223 DKFDD---SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
FDD +LNF M G D T + LS V E G + S + G + D+
Sbjct: 77 --FDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDL 134
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEA 338
V N+ I+MYS+ G AR +FD + + +SW +++SG +Q+G EA+ +F M
Sbjct: 135 VVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMR 194
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G D V+ S+I+ C L+L + G + + V N L+ YSKCG +
Sbjct: 195 EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEA 254
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
+ +FY + E+ VVSWTTMI+ N + +A+ +F + + PN VTF+ +L A
Sbjct: 255 VKSVFYQMSERNVVSWTTMISS---NRD--DAVSIFLNMRLDGVYPNEVTFVGLLNAVKC 309
Query: 459 TGFLEKGWAI 468
+++G I
Sbjct: 310 NEQIKEGLKI 319
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 4/204 (1%)
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
C L +G +H GF V V N ++ MY K G D+A +F+ + D VSW
Sbjct: 13 CRGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNT 72
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
++SG+ D AL M++AG + D T + +S C S LG + G
Sbjct: 73 ILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSG 129
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF-VEALDLF 434
L+ +++V N+ I MYS+ GS AR +F +P K ++SW ++++G + G F EA+ +F
Sbjct: 130 LESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIF 189
Query: 435 HQLMELDLRPNRVTFLAVLQACTH 458
+M + + V+F +V+ C H
Sbjct: 190 RDMMREGVELDHVSFTSVITTCCH 213
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 305/640 (47%), Gaps = 43/640 (6%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ S + WNS R ++ + Q ND +L K AK L
Sbjct: 27 FSSHQPHPWNSSSR-------LRASMPIPNQTHFNDPNTVHLFCSNALKISAKKGYLPEG 79
Query: 74 QMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA-- 117
+ +H H++K S ++KC + A K+F+E+ VR+V SWN M+
Sbjct: 80 KQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGR 139
Query: 118 ----QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
+ + F M L + D +T GL + + +H F + +G D
Sbjct: 140 NDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFD 199
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
D V + YAKC ++ A VFC + R +V WN MV+ + +++
Sbjct: 200 LDCFVGCALVGLYAKCGFVENARRVFCDVS--CRDLVMWNVMVSCYVFNSLPEEAFR--- 254
Query: 234 HMMYNGFRLDVTT----VVSLLSSFVCPEALVQ---GRLVHSHGIHYGFDLDVSVINTLI 286
++N RLDV S L S + +AL G+ VHS + FD DV V + LI
Sbjct: 255 --VFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALI 312
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
+MY+K +I AR +FD + R V+W MI G+ GD +E ++L M G LPD +
Sbjct: 313 NMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDEL 372
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T+ S+IS CG + A+ +A +D + V N+LI YSKCGSI A + F
Sbjct: 373 TISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELT 432
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
+ +V+WT++I A +G ++ ++F +++ ++P+R+ FL VL AC H G + KG
Sbjct: 433 SQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKG- 491
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ + P+ +HY+C+ DLLGR G + EA + ++SMPI+ D+ G + +C
Sbjct: 492 -LHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSC 550
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
K+H N+E+ + A LF +EP + Y M+N +A W V IR M+ + K PG
Sbjct: 551 KLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPG 610
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
S I + +F + D+ H + Y L+ L +E+
Sbjct: 611 CSWIEIGNQIHSFVSNDKSHPNALEMYVTLNMLLRPMKEQ 650
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 215/348 (61%), Gaps = 6/348 (1%)
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV N+LI Y K G ++SAR LFD + RT VSWT MI+GY + G +AL +F M+
Sbjct: 176 DVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQ 235
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G PD +++++++ C Q GALE+GKW YA G +CNALI+MY+KCG I
Sbjct: 236 MVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCID 295
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+A LF L EK V+SW+TMI G A +G+ EA+ LF ++ ++ + PN +TFL VL AC+
Sbjct: 296 EAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACS 355
Query: 458 HTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
HTG ++G + +D SY+ PE++HY C+ DLLGR G L +ALD + MPIK D
Sbjct: 356 HTGLWDEG----LKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPD 411
Query: 516 AGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTM 575
+ IW +LL +C+IH N++I L +LEP + YV +AN YA G+W+ V+NIR +
Sbjct: 412 SRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKL 471
Query: 576 MKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHS 623
++ ++KK PG S +N F + D S+ + +L+ LAL+
Sbjct: 472 IRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGLALNQ 519
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 179/429 (41%), Gaps = 63/429 (14%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQM---KQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
I +N+ IR + + +F QM N + P+ TFPF+ K+C +
Sbjct: 72 NIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGM 131
Query: 75 MIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL 134
+HG + K + E NA++ + + G L N ++F M
Sbjct: 132 QVHGLVYK--------FGADFHCITE---------NALIDMYTKFGDLTNACKVFEEMS- 173
Query: 135 VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
DV N+ I Y K +
Sbjct: 174 --------------------------------------HRDVISWNSLIFGYVKLGQMNS 195
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
A +F + +RT+VSW +M+ G + D+L+ +R M G D +++++L +
Sbjct: 196 ARELFDDMP--VRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPAC 253
Query: 255 VCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
AL G+ +H + GF + N LI MY+KCG ID A LFD + ++ +SW+
Sbjct: 254 AQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWS 313
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACS 373
MI G A G EA++LF M P+ +T L ++ C +G + G K+FD + S
Sbjct: 314 TMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSAS 373
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALD 432
++ + LID+ + G +G A + +P K W ++++ C ++ A+
Sbjct: 374 YHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVI 433
Query: 433 LFHQLMELD 441
QLMEL+
Sbjct: 434 AVKQLMELE 442
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 122/304 (40%), Gaps = 38/304 (12%)
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+ Q + +H+H + ++ ++ G + A +LF + ++ A+I
Sbjct: 23 ITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRT 82
Query: 320 YAQKGDLDEALRLFFAM---EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
YA A+ +F M PD T +I C LG G
Sbjct: 83 YAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGA 142
Query: 377 KDNVMVCNALIDMYS-------------------------------KCGSIGDARELFYA 405
+ + NALIDMY+ K G + ARELF
Sbjct: 143 DFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDD 202
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+P + +VSWTTMI G G + +ALD+F ++ + + P+ ++ +AVL AC G LE G
Sbjct: 203 MPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVG 262
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
I + Y DK + + + + ++ + G + EA + + ++ D W T++
Sbjct: 263 KWIHM--YADKN-GFLRKTGICNALIEMYAKCGCIDEAWNLFDQL-VEKDVISWSTMIGG 318
Query: 526 CKIH 529
H
Sbjct: 319 LANH 322
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 182/582 (31%), Positives = 290/582 (49%), Gaps = 37/582 (6%)
Query: 79 HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ-MGFLENVLRLFYNMRLVGI 137
+I+ + +VK D L A K+FDEM R+ S+ ++ G+A+ + FLE + LF + G
Sbjct: 77 NILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE-AIELFVRLHREGH 135
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ + + + + L +H+ +G +++ V I +Y+ C + +A
Sbjct: 136 ELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVARE 195
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF GI + +VSW MV D F ++L + M GF+ + T S+ + +
Sbjct: 196 VFDGI--LYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGL 253
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
EA G+ VH + ++LD+ V L+ +Y+K GDID AR F+ I + + W+ MI
Sbjct: 254 EAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMI 313
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ YAQ EA+ +FF M A LP+ T S++ C L LG + GL
Sbjct: 314 ARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLH 373
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V V NAL+D+Y+KCG + ++ ELF P + V+W T+I G G+ +AL LF +
Sbjct: 374 SDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM 433
Query: 438 ME-------------------------------LDLRPNRVTFLAVLQACTHTGFLEKGW 466
+E L ++P+++TF+ VL AC + G L++G
Sbjct: 434 LEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQ 493
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
A D GI P ++HY+CM LLGR G L +A+ + +P + +W LL AC
Sbjct: 494 AYFTSMIQDHGIE--PCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGAC 551
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
IH +IE+G A + ++EP A +V ++N YA RWD VA++R MKR VKK PG
Sbjct: 552 VIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPG 611
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
S G +FT D H E + +L+ L + +++ Y
Sbjct: 612 LSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGY 653
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 22/271 (8%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+G+ +H + G LD+ N L++MY K + A LFD + +R +S+ +I GYA
Sbjct: 56 RGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYA 115
Query: 322 QKGDLDEALRLFFAMEAAG-ELPDLV--TVLSMI--SGCGQSGALELGKWFDNYAC--SG 374
+ EA+ LF + G EL V T+L ++ + CG+ G + +AC
Sbjct: 116 ESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELG-------WGIHACIFKL 168
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
G + N V ALID YS CG + ARE+F + K +VSWT M+ A N F EAL LF
Sbjct: 169 GHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLF 228
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--D 492
Q+ + +PN TF +V +AC + G ++ + ELD Y +A D
Sbjct: 229 SQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVH-----GCALKSRYELDLYVGVALLD 283
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
L + G + +A + +P K D W ++
Sbjct: 284 LYTKSGDIDDARRAFEEIP-KKDVIPWSFMI 313
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 28/348 (8%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP------------ 84
+ L LF QM+ +PNN TF + KAC L + +HG +KS
Sbjct: 223 EALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALL 282
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ K +D A + F+E+ +DV W+ M+ +AQ + + +F+ MR + +
Sbjct: 283 DLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQF 342
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + QA + L+L +H I IG+ +DV V N + YAKC ++ + +F
Sbjct: 343 TFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFA-- 400
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R V+WN+++ G + +L + +M+ + T S L + AL
Sbjct: 401 ESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEP 460
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-----WTAMI 317
G +HS + D ++S + G +D + F + + +T M+
Sbjct: 461 GLQIHSLTV----KPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMV 516
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ G LD+A++L ++ P ++ +++ C +ELG+
Sbjct: 517 WLLGRGGHLDKAVKL---IDEIPFQPSVMVWRALLGACVIHNDIELGR 561
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+ I +++ + + +F QM+Q + PN TF + +ACA + L IH H++
Sbjct: 309 WSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVI 368
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC R++ + ++F E R+ +WN ++VG Q+G E LR
Sbjct: 369 KIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALR 428
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
LF NM +QA VT +A L +HS +
Sbjct: 429 LFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTV 469
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 286/552 (51%), Gaps = 11/552 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAA 151
A ++FD M R+ SW+ M+ G+A E LF M +++FV L+ +
Sbjct: 66 ARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVS 125
Query: 152 IHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ L LL + +H + G+ VSV N+ ++ YAK + A VF R R
Sbjct: 126 VP---LGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF--ESSRERNS 180
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
++W++M+ G + D +++ + M GF T V +L++ AL G+ H
Sbjct: 181 ITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGL 240
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ GF++ + V + L+ MY+KCG I A+ FD + + V WTAM+SG+ Q G+ +EA
Sbjct: 241 MVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEA 300
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L L+ M+ G +P T+ S + C ALE GK GL V +AL M
Sbjct: 301 LTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTM 360
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
YSKCG++ D +F +P++ V++W ++I+G + NG ALDLF ++ P+ +TF
Sbjct: 361 YSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITF 420
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+ +L AC+H G +++GW + D G++ P LDHY+CM D+L R G LKEA DF++S
Sbjct: 421 INILCACSHMGLVDRGWEYFSLMTKDYGLT--PRLDHYACMVDILSRAGMLKEAKDFIES 478
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
+ I +W +L AC+ + ++G Y L +L ++ Y+ ++N YA +W+ V
Sbjct: 479 ITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDV 538
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
+R +M+ V K PG S +N + F ++ H E+E L LA H ++E Y
Sbjct: 539 ERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGYH 598
Query: 630 SHLKWIPEHEAG 641
S K + E G
Sbjct: 599 SSSKLSFDEELG 610
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 186/353 (52%), Gaps = 11/353 (3%)
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
++V VC + ++ Y K + A VF G+ + R SW++MVAG +++ + +R
Sbjct: 45 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQ--RNSFSWSTMVAGYAAEKCSEEAFDLFR 102
Query: 234 HMMYNGFRLDVTTVVS-LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M+ V + +LS+ P L+ G +H + G VSV N+L++MY+K
Sbjct: 103 LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKA 162
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + +A +F+ +R ++W+AMI+GYAQ G+ D A+ +F M AAG P T + ++
Sbjct: 163 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 222
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
+ GAL +GK G + + V +AL+DMY+KCG I DA+E F L E +V
Sbjct: 223 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 282
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SI 470
WT M++G NGE EAL L+ ++ + + P++ T + L+AC LE G + I
Sbjct: 283 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 342
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
++Y G+ + S ++ + + G L++ + + +P + D W +++
Sbjct: 343 VKY---GLGLGAPVG--SALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSII 389
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 202/436 (46%), Gaps = 19/436 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W++ + + + + LFR M ++ E + + A + L+ + +HG I
Sbjct: 81 WSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLI 140
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + + K + A+ +F+ R+ +W+AM+ G+AQ G ++ +
Sbjct: 141 VKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAV 200
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M G T +G+ A+ L++ K H + +G + + V + + Y
Sbjct: 201 SMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMY 260
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC + A+ F + E +V W +MV+G + +++L Y M G +T
Sbjct: 261 AKCGCIADAKEGFDQLYE--VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKST 318
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S L + AL G+ +H+ + YG L V + L +MYSKCG+++ +F I
Sbjct: 319 IASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP 378
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
DR ++W ++ISG++Q G + AL LF M+ G +PD +T ++++ C G ++ G +
Sbjct: 379 DRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWE 438
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+F GL + ++D+ S+ G + +A++ ++ + W ++ C
Sbjct: 439 YFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSL 498
Query: 425 GEFVEALDLFHQLMEL 440
+F +LMEL
Sbjct: 499 RDFDVGAYAGERLMEL 514
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 286/552 (51%), Gaps = 11/552 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAA 151
A ++FD M R+ SW+ M+ G+A E LF M +++FV L+ +
Sbjct: 172 ARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVS 231
Query: 152 IHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ L LL + +H + G+ VSV N+ ++ YAK + A VF R R
Sbjct: 232 VP---LGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF--ESSRERNS 286
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
++W++M+ G + D +++ + M GF T V +L++ AL G+ H
Sbjct: 287 ITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGL 346
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ GF++ + V + L+ MY+KCG I A+ FD + + V WTAM+SG+ Q G+ +EA
Sbjct: 347 MVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEA 406
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L L+ M+ G +P T+ S + C ALE GK GL V +AL M
Sbjct: 407 LTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTM 466
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
YSKCG++ D +F +P++ V++W ++I+G + NG ALDLF ++ P+ +TF
Sbjct: 467 YSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITF 526
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+ +L AC+H G +++GW + D G++ P LDHY+CM D+L R G LKEA DF++S
Sbjct: 527 INILCACSHMGLVDRGWEYFSLMTKDYGLT--PRLDHYACMVDILSRAGMLKEAKDFIES 584
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
+ I +W +L AC+ + ++G Y L +L ++ Y+ ++N YA +W+ V
Sbjct: 585 ITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDV 644
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
+R +M+ V K PG S +N + F ++ H E+E L LA H ++E Y
Sbjct: 645 ERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGYH 704
Query: 630 SHLKWIPEHEAG 641
S K + E G
Sbjct: 705 SSSKLSFDEELG 716
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 221/439 (50%), Gaps = 14/439 (3%)
Query: 91 LDCAYKIFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
L A+ +FD++ A RDVASWN++L ++ L+ + R + + +
Sbjct: 65 LAAAFAVFDDIPPAARDVASWNSLLNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAF 124
Query: 149 QAAIHAKHLSLLKSVHSFGIHI-GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
AA A + H+ I ++V VC + ++ Y K + A +F G+ + R
Sbjct: 125 TAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQ--R 182
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS-LLSSFVCPEALVQGRLV 266
SW++MVAG +++ + +R M+ V + +LS+ P L+ G +
Sbjct: 183 NSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQM 242
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + G VSV N+L++MY+K G + +A +F+ +R ++W+AMI+GYAQ G+
Sbjct: 243 HGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEA 302
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
D A+ +F M AAG P T + +++ GAL +GK G + + V +AL
Sbjct: 303 DSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSAL 362
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+KCG I DA+E F L E +V WT M++G NGE EAL L+ ++ + + P++
Sbjct: 363 VDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSK 422
Query: 447 VTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
T + L+AC LE G + I++Y G+ + S ++ + + G L++ +
Sbjct: 423 STIASGLRACAGIAALEPGKQLHTQIVKY---GLGLGAPVG--SALSTMYSKCGNLEDGM 477
Query: 505 DFVQSMPIKSDAGIWGTLL 523
+ +P + D W +++
Sbjct: 478 SVFRRIPDR-DVIAWNSII 495
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARVLFDGICDRTR--V 311
CP G +H+ + G V N+LI+ YS + +A +FD I R
Sbjct: 27 CPR---HGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVA 83
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SW ++++ ++ LD R + ++ LP + + + ++ + G A
Sbjct: 84 SWNSLLNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALA 143
Query: 372 CS-GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
C NV VC +L++MY K G + DAR +F +P++ SW+TM+AG A EA
Sbjct: 144 CKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEA 203
Query: 431 LDLFHQLME 439
DLF ++E
Sbjct: 204 FDLFRLMLE 212
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 286/552 (51%), Gaps = 11/552 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAA 151
A ++FD M R+ SW+ M+ G+A E LF M +++FV L+ +
Sbjct: 172 ARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVS 231
Query: 152 IHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
+ L LL + +H + G+ VSV N+ ++ YAK + A VF R R
Sbjct: 232 VP---LGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF--ESSRERNS 286
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
++W++M+ G + D +++ + M GF T V +L++ AL G+ H
Sbjct: 287 ITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGL 346
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
+ GF++ + V + L+ MY+KCG I A+ FD + + V WTAM+SG+ Q G+ +EA
Sbjct: 347 MVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEA 406
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
L L+ M+ G +P T+ S + C ALE GK GL V +AL M
Sbjct: 407 LTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTM 466
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
YSKCG++ D +F +P++ V++W ++I+G + NG ALDLF ++ P+ +TF
Sbjct: 467 YSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITF 526
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS 509
+ +L AC+H G +++GW + D G++ P LDHY+CM D+L R G LKEA DF++S
Sbjct: 527 INILCACSHMGLVDRGWEYFSLMTKDYGLT--PRLDHYACMVDILSRAGMLKEAKDFIES 584
Query: 510 MPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGV 569
+ I +W +L AC+ + ++G Y L +L ++ Y+ ++N YA +W+ V
Sbjct: 585 ITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDV 644
Query: 570 ANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
+R +M+ V K PG S +N + F ++ H E+E L LA H ++E Y
Sbjct: 645 ERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGYH 704
Query: 630 SHLKWIPEHEAG 641
S K + E G
Sbjct: 705 SSSKLSFDEELG 716
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 219/439 (49%), Gaps = 14/439 (3%)
Query: 91 LDCAYKIFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
L A+ +FD++ A RDV SWN++L + L+ + R + + +
Sbjct: 65 LAAAFAVFDDIPPAARDVTSWNSLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAF 124
Query: 149 QAAIHAKHLSLLKSVHSFGIHI-GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
AA A + H+ I ++V VC + ++ Y K + A VF G+ + R
Sbjct: 125 TAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQ--R 182
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS-LLSSFVCPEALVQGRLV 266
SW++MVAG +++ + +R M+ V + +LS+ P L+ G +
Sbjct: 183 NSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQM 242
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + G VSV N+L++MY+K G + +A +F+ +R ++W+AMI+GYAQ G+
Sbjct: 243 HGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEA 302
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
D A+ +F M AAG P T + +++ GAL +GK G + + V +AL
Sbjct: 303 DSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSAL 362
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+KCG I DA+E F L E +V WT M++G NGE EAL L+ ++ + + P++
Sbjct: 363 VDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSK 422
Query: 447 VTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
T + L+AC LE G + I++Y G+ + S ++ + + G L++ +
Sbjct: 423 STIASGLRACAGIAALEPGKQLHTQIVKY---GLGLGAPVG--SALSTMYSKCGNLEDGM 477
Query: 505 DFVQSMPIKSDAGIWGTLL 523
+ +P + D W +++
Sbjct: 478 SVFRRIPDR-DVIAWNSII 495
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARVLFDGICDRTR--V 311
CP G +H+ + G V N+LI+ YS + +A +FD I R
Sbjct: 27 CPR---HGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVT 83
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
SW ++++ + LD R + ++ LP + + + ++ + G A
Sbjct: 84 SWNSLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALA 143
Query: 372 CS-GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
C NV VC +L++MY K G + DAR +F +P++ SW+TM+AG A EA
Sbjct: 144 CKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEA 203
Query: 431 LDLFHQLME 439
DLF ++E
Sbjct: 204 FDLFRLMLE 212
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 299/555 (53%), Gaps = 18/555 (3%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE-NVLRLFYNMRLVG 136
G+ + S + + L A ++F+EM RD+ SWNAM+ G++Q G + +F M G
Sbjct: 202 GNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGG 261
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ D ++ A + K+L L + +H I + V+V N IS+Y KC ++ A
Sbjct: 262 MELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDAR 321
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
LVF + ER VVSW +M++ ++++F+ M +G + T V L+ +
Sbjct: 322 LVFQNMNER--NVVSWTTMIS-----IDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITI 374
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
E +VQG++VH GF +V N++I+MY+K + + +F + + ++W A+
Sbjct: 375 GELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNAL 434
Query: 317 ISGYAQKGDLDEALRLFFA--MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
ISG+ G EA+R FF+ +E+ ++L+ I G + +L+ G+ +
Sbjct: 435 ISGFVHNGLCQEAIRAFFSGLIESKPNQYSFGSILNAI-GAAEDVSLKYGQRCHSQIIKL 493
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL + +V +AL+DMY+K GSI +++++F P++ +WTT+I+ A +G++ ++ F
Sbjct: 494 GLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWF 553
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++ L++RP+ +TFL++L AC G ++ G + D I P +HYSC+ D+L
Sbjct: 554 EEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQI--EPSAEHYSCLVDML 611
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
GR G+L+EA + +P + +LL AC++H N+++GE VA L ++EP + YV
Sbjct: 612 GRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADALMEMEPTESGSYV 671
Query: 555 EMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT-----FTAEDRYHAES 609
M+N YA G+W+ VA +R M+ VKK G S + G + F++ D H +S
Sbjct: 672 LMSNLYAEIGKWEMVAKVRKRMRVKGVKKEVGFSWVDVGGIDSSLSLHGFSSGDTSHPQS 731
Query: 610 ELTYPVLDCLALHSR 624
E + +CL +
Sbjct: 732 EAICRMAECLGFEMK 746
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 204/442 (46%), Gaps = 20/442 (4%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVTVMGLTQAAIH 153
IF+ + D+ SWN +L G E+ M G+ D + TV+ +
Sbjct: 121 IFENLTHPDIVSWNTVLSGCQTS---EDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVE 177
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
A L L+ +HS + G D +V V N IS Y++ L A VF E + R +VSWN
Sbjct: 178 AYFLIGLQ-LHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVF--EEMKTRDLVSWN 234
Query: 214 SMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
+M++G + + ++++ + M G LD + S +S+ + L R +H I
Sbjct: 235 AMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIK 294
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
+ V+V N LIS Y KC I+ AR++F + +R VSWT MIS D EA+
Sbjct: 295 TRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS-----IDEAEAVSF 349
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M G P+ VT + +I + GK + G VCN++I MY+K
Sbjct: 350 FNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAK 409
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
S+ D+ ++F L + +++W +I+G NG EA+ F + ++ +PN+ +F ++
Sbjct: 410 FKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGL-IESKPNQYSFGSI 468
Query: 453 LQACTHTGFLEKGWAISI-IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
L A + + Q G++ +P + S + D+ ++G + E+ P
Sbjct: 469 LNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVS--SALLDMYAKRGSICESQKVFVETP 526
Query: 512 IKSDAGIWGTLLCACKIHLNIE 533
+S W T++ A H + E
Sbjct: 527 QQSQFA-WTTIISAYARHGDYE 547
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 163/326 (50%), Gaps = 31/326 (9%)
Query: 159 LLKSVHSFGI-HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
L +H F I H V+ + V N+ ++ Y K A +F + +VSWN++++
Sbjct: 82 LGSQIHGFSIIHEFVNVTI-VSNSLMNMYCKSGQFCKALCIFENLTHP--DIVSWNTVLS 138
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLS-SFVCPEA-LVQGRLVHSHGIHYGF 275
GC + D+ +F M +G D T ++LS + EA + G +HS + +GF
Sbjct: 139 GCQTSE---DAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGF 195
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD-EALRLFF 334
D +V V N LISMYS+ G + AR +F+ + R VSW AMISGY+Q+G EA+ +F
Sbjct: 196 DCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFL 255
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M G D ++ S +S CG LEL + + + +V V N LI Y KC
Sbjct: 256 QMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQ 315
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
I DAR +F + E+ VVSWTTMI+ + EA+ F+++ + PN VTF+ ++
Sbjct: 316 VIEDARLVFQNMNERNVVSWTTMIS-----IDEAEAVSFFNEMRLDGVYPNDVTFVGLIH 370
Query: 455 A----------------CTHTGFLEK 464
A CT TGF K
Sbjct: 371 AITIGELVVQGKMVHGFCTKTGFSSK 396
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 212/444 (47%), Gaps = 37/444 (8%)
Query: 22 WNSQI----REAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
WN+ I +E + EA + +F QM + +E + ++F AC +L ++ IH
Sbjct: 233 WNAMISGYSQEGIYGLEA---ISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIH 289
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAML-VGFAQMGFL 122
G +K S + KC ++ A +F M R+V SW M+ + A+
Sbjct: 290 GLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDEAE---- 345
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ F MRL G+ + VT +GL A + + K VH F G + +VCN+
Sbjct: 346 --AVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSI 403
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN-FYRHMMYNGFR 241
I+ YAK ++ + VF E + + +++WN++++G + +++ F+ ++ + +
Sbjct: 404 ITMYAKFKSMQDSVKVF--QELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIES--K 459
Query: 242 LDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ + S+L++ E +L G+ HS I G + D V + L+ MY+K G I ++
Sbjct: 460 PNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQ 519
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F +++ +WT +IS YA+ GD + + F M PD +T LS+++ CG+ G
Sbjct: 520 KVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRG 579
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTM 417
+++G F + ++ + + L+DM + G + +A L +P +S ++
Sbjct: 580 MVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSL 639
Query: 418 IAGCALNGEFVEALDLFHQLMELD 441
+ C ++G + LME++
Sbjct: 640 LGACRVHGNVDMGERVADALMEME 663
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 10/241 (4%)
Query: 228 SLNFYRHMMYNGF--RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
S + + +GF +D TV + L + C + G +H I + F V N+L
Sbjct: 48 SFQIIKEHLLSGFINNIDEFTVANALKA--CRGYPLLGSQIHGFSIIHEFVNVTIVSNSL 105
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
++MY K G A +F+ + VSW ++SG D A M ++G + D
Sbjct: 106 MNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQTSED---AFSFACKMNSSGVVFDA 162
Query: 346 VTVLSMISGCGQ--SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
VT +++S C + +G + G V V NALI MYS+ G + +AR +F
Sbjct: 163 VTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVF 222
Query: 404 YALPEKIVVSWTTMIAGCALNGEF-VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
+ + +VSW MI+G + G + +EA+ +F Q+ + +R++F + + AC + L
Sbjct: 223 EEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNL 282
Query: 463 E 463
E
Sbjct: 283 E 283
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 258/482 (53%), Gaps = 5/482 (1%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L ++ I AK L K +H+ +G+ ++ + ++ Y+ C+ L+ A +F I +
Sbjct: 64 LLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKG- 122
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ WN ++ + + +++ Y M+ G + D T+ +L + + +GR++
Sbjct: 123 -NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVI 181
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H I G++ DV V L+ MY+KCG + AR +FD I DR V W +M++ YAQ G
Sbjct: 182 HERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHP 241
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
DE+L L M A G P T++++IS L G+ + G + N V AL
Sbjct: 242 DESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTAL 301
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
IDMY+KCGS+ A LF L EK VVSW +I G A++G VEALDLF ++M+ + +P+
Sbjct: 302 IDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDH 360
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TF+ L AC+ L++G A+ + D I NP ++HY+CM DLLG G+L EA D
Sbjct: 361 ITFVGALAACSRGRLLDEGRALYNLMVRDCRI--NPTVEHYTCMVDLLGHCGQLDEAYDL 418
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
++ M + D+G+WG LL +CK H N+E+ E L +LEP + YV +AN YA G+W
Sbjct: 419 IRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKW 478
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
+GVA +R +M +KK S + K F + D H S Y L L RE
Sbjct: 479 EGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREA 538
Query: 627 AY 628
Y
Sbjct: 539 GY 540
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 169/358 (47%), Gaps = 9/358 (2%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C+ L A+ +FD++ ++ WN ++ +A G E + L++ M G++ D T+ +
Sbjct: 106 CNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFV 165
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+A + + +H I G + DV V + YAKC + A VF I + R
Sbjct: 166 LKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVD--R 223
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V WNSM+A D+SL+ M G R T+V+++SS L GR +H
Sbjct: 224 DAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIH 283
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
G +GF + V LI MY+KCG + A VLF+ + ++ VSW A+I+GYA G
Sbjct: 284 GFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAV 343
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG-GLKDNVMVCNAL 386
EAL LF M + PD +T + ++ C + L+ G+ N + V +
Sbjct: 344 EALDLFERMMKEAQ-PDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCM 402
Query: 387 IDMYSKCGSIGDARELFY---ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+D+ CG + +A +L +P+ V W ++ C +G A +L+EL+
Sbjct: 403 VDLLGHCGQLDEAYDLIRQMDVMPDSGV--WGALLNSCKTHGNVELAEVALEKLIELE 458
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 160/366 (43%), Gaps = 66/366 (18%)
Query: 22 WNSQIREAVNKNEAHKTLL-LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN IR A N H+T + L+ QM + ++P+N T PF+ KAC+ LS + ++IH +
Sbjct: 127 WNVLIR-AYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERV 185
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
++S + KC + A +FD++ RD WN+ML +AQ G + L
Sbjct: 186 IRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESL 245
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M G++ T++ + ++ L + +H FG G + V I Y
Sbjct: 246 SLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMY 305
Query: 187 AKCDDLKMAELVFCGIEERLRT--VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
AKC +K+A ++F ERLR VVSWN+++ G ++L+ + MM + D
Sbjct: 306 AKCGSVKVACVLF----ERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDH 360
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T V L+ A +GRL +D R L++
Sbjct: 361 ITFVGALA------ACSRGRL-----------------------------LDEGRALYNL 385
Query: 305 ICDRTRVS-----WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+ R++ +T M+ G LDEA L M+ +PD ++++ C G
Sbjct: 386 MVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDV---MPDSGVWGALLNSCKTHG 442
Query: 360 ALELGK 365
+EL +
Sbjct: 443 NVELAE 448
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
SLL S + +AL G+ +H+ G ++ + L++ YS C + +A LFD I
Sbjct: 63 SLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKG 122
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
W +I YA G + A+ L+ M G PD T+ ++ C + G+
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
G + +V V AL+DMY+KCG + DAR +F + ++ V W +M+A A NG
Sbjct: 183 ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPD 242
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS 488
E+L L ++ +RP T + V+ + L G I + G YN ++ +
Sbjct: 243 ESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGW-RHGFQYNDKVK--T 299
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ D+ + G +K A + + K W ++ +H
Sbjct: 300 ALIDMYAKCGSVKVACVLFERLREKRVVS-WNAIITGYAMH 339
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 260/487 (53%), Gaps = 42/487 (8%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWIS---SYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
LK +H+ + G+ D ++S S D L A++VF G + R T + WN M+
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD-RPDTFL-WNLMI 87
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G + D+ + SL Y+ M+ + + T SLL + A + +H+ G++
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 277 LDVSVINTLISMYS-------------------------------KCGDIDSARVLFDGI 305
DV +N+LI+ Y+ K G +D A LF +
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ +SWT MISGY Q EAL+LF M+ + PD V++ + +S C Q GALE GK
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 366 WFDNYACSGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
W +Y ++ D+V+ C LIDMY+KCG + +A E+F + +K V +WT +I+G A +
Sbjct: 268 WIHSYLNKTRIRMDSVLGC-VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD-DKGISYNPE 483
G EA+ F ++ ++ ++PN +TF AVL AC++TG +E+G +I Y ++ + P
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG---KLIFYSMERDYNLKPT 383
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HY C+ DLLGR G L EA F+Q MP+K +A IWG LL AC+IH NIE+GE + L
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
++P+ YV AN +A+ +WD A R +MK V K PG S + G T F A D
Sbjct: 444 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 503
Query: 604 RYHAESE 610
R H E E
Sbjct: 504 RSHPEIE 510
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 168/387 (43%), Gaps = 40/387 (10%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
D L A +FD D WN M+ GF+ E L L+ M + T L
Sbjct: 63 DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE---- 204
+A + +H+ +G + DV N+ I+SYA + K+A L+F I E
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 205 -------------------------RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ +SW +M++G D ++L + M +
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D ++ + LS+ AL QG+ +HS+ +D + LI MY+KCG+++ A
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F I ++ +WTA+ISGYA G EA+ F M+ G P+++T ++++ C +G
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 360 ALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTM 417
+E GK F + LK + ++D+ + G + +A+ +P K V W +
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 418 IAGCALN---------GEFVEALDLFH 435
+ C ++ GE + A+D +H
Sbjct: 423 LKACRIHKNIELGEEIGEILIAIDPYH 449
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 144/345 (41%), Gaps = 49/345 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR +E ++LLL+++M + N TFP + KAC+ LS + IH I
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 82 K---------------------------------------------SPFVKCDRLDCAYK 96
K +VK ++D A
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F +MA ++ SW M+ G+ Q + L+LF+ M+ ++ D V++ A
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +HS+ + D + I YAKC +++ A VF I++ ++V +W +++
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK--KSVQAWTALI 320
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV-HSHGIHYGF 275
+G Y ++++ + M G + +V T ++L++ + +G+L+ +S Y
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 276 DLDVSVINTLISMYSKCGDIDSA-RVLFDGICDRTRVSWTAMISG 319
+ ++ + + G +D A R + + V W A++
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 186/630 (29%), Positives = 302/630 (47%), Gaps = 99/630 (15%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I +N +I + + L Q + D+E T+ + + CA L + + IH
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHS 125
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
I + +V C L +IFD++A V WN ++ G+A++G
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIG---- 181
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
N R + LSL K + GI +
Sbjct: 182 ------NFR---------------------ESLSLFKRMRELGIR------------RVE 202
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
S K D E R V+SWNSM++G + L+ + M+ G D+
Sbjct: 203 SARKLFD-----------ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDL 251
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+VS+ ++++ N L+ MYSK G+++SA +F+
Sbjct: 252 ATMVSV---------------------------ELTLNNCLLDMYSKSGNLNSAIQVFET 284
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +R+ VSWT+MI+GYA++G D ++RLF ME P+ +T+ ++ C ALE G
Sbjct: 285 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERG 344
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ + G + V NAL+DMY KCG++G AR LF +PEK +VSWT MIAG ++
Sbjct: 345 QEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMH 404
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EA+ F+++ + P+ V+F+++L AC+H+G L++GW + ++ I P+
Sbjct: 405 GYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIE--PKS 462
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+C+ DLL R G L +A F++ MPI+ DA IWG LLC C+I+ ++++ E VA +F+
Sbjct: 463 EHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 522
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP + YV +AN YA +W+ V +R + R ++K PG S I GK F D
Sbjct: 523 LEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDS 582
Query: 605 YHAESELTYPVLDCLALHSREEAYSSHLKW 634
H + +L +EE + +++
Sbjct: 583 SHPLANKIELLLKKTRTRMKEEGHFPKMRY 612
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ W S I + + ++ LF +M++ D+ PN++T I ACA L+ L Q IH
Sbjct: 289 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIH 348
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
GHI+++ F +KC L A +FD + +D+ SW M+ G+ G+
Sbjct: 349 GHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGS 408
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ F MR GI+ D V+ + + A H+
Sbjct: 409 EAIAAFNEMRNSGIEPDEVSFISILYACSHS 439
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 26/249 (10%)
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL- 345
++Y C I ++ VL D + I + + G+L A+ L PDL
Sbjct: 46 NLYHSCATIGTS-VLPSETIDCKITDYNIEICRFCELGNLRRAMELI----NQSPKPDLE 100
Query: 346 -VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
T S++ C +++ G+ + S ++ + ++ + L+ MY CG + + R +F
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR--------------PNRVTFL 450
+ + V W ++ G A G F E+L LF ++ EL +R + +++
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWN 220
Query: 451 AVLQACTHTGFLEKGW-----AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+++ G EKG + + D + EL +C+ D+ + G L A+
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQ 280
Query: 506 FVQSMPIKS 514
++M +S
Sbjct: 281 VFETMGERS 289
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 303/628 (48%), Gaps = 26/628 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I + ++L+ FR M + I PN + +C+ L L + + IHG +
Sbjct: 178 WNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVV 237
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEM-----AVRDVASWNAMLVGFAQMGF 121
VKS ++KC + A IF+ + R+ WN M+ G+ G
Sbjct: 238 VKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGC 297
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
L LF M + GI+ D+ T++ L + ++ K +H G+ ++ V
Sbjct: 298 FSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETA 357
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN-FYRHMMYNGF 240
+ Y KC D+ +F + ++ W+++++ C +L FY M +G
Sbjct: 358 LLDMYLKCGDMGTGLKIF--RRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGL 415
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D +V++L + +G +H GF DV V + L+ +Y+KC D+ ++
Sbjct: 416 A-DSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKK 474
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F + + VSW A+ISGYAQ DEAL+ F M+ P+ VT+ ++S C
Sbjct: 475 VFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSV 534
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+ L K Y GL V+V N+LI Y+KCG I + F +PE+ VSW ++I G
Sbjct: 535 MTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILG 594
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
++ E + LF +++ ++P+ VTF A+L AC+H G +++G +D +
Sbjct: 595 MGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVED--FNL 652
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P+L+ Y+CM DLLGR G L +A D + +MP D IWG+LL +CK H + + E VA
Sbjct: 653 KPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVAN 712
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+FKL P S V +AN Y G+ + +R+ +K +KK PG S ++ F
Sbjct: 713 HIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFI 772
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAY 628
A DR H++S+ Y ++ L + Y
Sbjct: 773 AGDRSHSQSDEIYAAVESLTTEIKRAGY 800
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 224/475 (47%), Gaps = 23/475 (4%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLT-FPFIAKA 63
S P +I +++ N+ IRE + ++ +M + ++ FP + KA
Sbjct: 59 SSKPLSTKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKA 118
Query: 64 CAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASW 109
L D+ + IHGH++K + + KC ++ A ++F++M D+ SW
Sbjct: 119 FGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSW 178
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
N M+ GF + L F +M GI + V + + + L+ + +H +
Sbjct: 179 NTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVV 238
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER---LRTVVSWNSMVAGCTYGDKF 225
G+D + + ++ I Y KC +K AE +F I ++ R V WN M++G F
Sbjct: 239 KSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCF 298
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL--VQGRLVHSHGIHYGFDLDVSVIN 283
+L + MM G + D +T+VSL S +C E+L G+ +H +G ++ V
Sbjct: 299 SQALLLFIKMMVWGIKPDYSTMVSLFS--LCSESLDIAFGKQIHGLIFKFGLKNNIRVET 356
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
L+ MY KCGD+ + +F + + W+A+IS AQ G +AL LF+ + L
Sbjct: 357 ALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLA 416
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D +++++ C G A G +V V +AL+D+Y+KC +G ++++F
Sbjct: 417 DSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVF 476
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
L +K +VSW +I+G A + EAL F + ++RPN VT +L C H
Sbjct: 477 LRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAH 531
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 139/268 (51%), Gaps = 10/268 (3%)
Query: 202 IEERLRTVVS---WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD-VTTVVSLLSSFVCP 257
+ +++T VS N+++ T FDD++ Y M+ +G +++ L+ +F
Sbjct: 63 LSTKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGL 122
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+ +GR +H H + G DVSV+N+L++MY KCG ++ A +F+ + + VSW MI
Sbjct: 123 CDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMI 182
Query: 318 SGYAQKGDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
SG+ + D +L F +M G P+ V +S I C +L G+ GL
Sbjct: 183 SGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGL 242
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-----WTTMIAGCALNGEFVEAL 431
+ ++LI+MY KCGSI +A +F ++ +K V W MI+G NG F +AL
Sbjct: 243 DVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQAL 302
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHT 459
LF ++M ++P+ T +++ C+ +
Sbjct: 303 LLFIKMMVWGIKPDYSTMVSLFSLCSES 330
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 278/554 (50%), Gaps = 7/554 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC LD A K+FD M R++ SW AM+ G +Q +R F MR+ G
Sbjct: 50 YSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAF 109
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+A + + K +H + G+ +++ V + Y+KC + A VF E
Sbjct: 110 SSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVF--EEM 167
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ VSW +M+ G + +F+++L ++ M+ +D + S L + +A GR
Sbjct: 168 PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGR 227
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF--DGICDRTRVSWTAMISGYAQ 322
VHS + GF+ D+ V N L MYSK GD++SA +F D C R VS+T +I GY +
Sbjct: 228 SVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC-RNVVSYTCLIDGYVE 286
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+++ L +F + G P+ T S+I C ALE G ++ V
Sbjct: 287 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 346
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+ L+DMY KCG + A + F + + ++W ++++ +G +A+ F ++++ +
Sbjct: 347 SSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGV 406
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+PN +TF+++L C+H G +E+G + DK P +HYSC+ DLLGR G+LKE
Sbjct: 407 KPNAITFISLLTGCSHAGLVEEG--LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKE 464
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A +F+ MP + +A W + L AC+IH + E+G+ A L KLEP ++ V ++N YA
Sbjct: 465 AKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYAN 524
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
+W+ V ++R M+ VKK PG S + KT F AED H Y LD L
Sbjct: 525 ERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQ 584
Query: 623 SREEAYSSHLKWIP 636
+ Y +P
Sbjct: 585 IKAAGYVPXTDSVP 598
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 196/421 (46%), Gaps = 17/421 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------- 70
W + I ++ + + F M+ P F +ACA L +
Sbjct: 74 WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 133
Query: 71 ---IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
I S++ G ++ + KC + A K+F+EM +D SW AM+ G++++G E L
Sbjct: 134 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 193
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M + D + A K +SVHS + +G ++D+ V N Y+
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K D++ A VF GI+ R VVS+ ++ G ++ + L+ + + G + T
Sbjct: 254 KAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 312
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
SL+ + AL QG +H+ + FD D V + L+ MY KCG ++ A FD I D
Sbjct: 313 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGD 372
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
T ++W +++S + Q G +A++ F M G P+ +T +S+++GC +G +E G +
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY 432
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNG 425
F + + G+ + +ID+ + G + +A+E +P E W + + C ++G
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492
Query: 426 E 426
+
Sbjct: 493 D 493
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 119/214 (55%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + ++ ++ + L +G+ +H+ I G+ + N L++MYSKCG++D A LF
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + R VSWTAMISG +Q EA+R F M GE+P S I C G++E
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
+GK A G+ + V + L DMYSKCG++ DA ++F +P K VSWT MI G +
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
GEF EAL F ++++ ++ ++ + L AC
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 4/182 (2%)
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
L D + +I ++ L GK G + N L++MYSKCG + A +
Sbjct: 2 LRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK 61
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
LF +P++ +VSWT MI+G + N +F EA+ F + P + F + ++AC G
Sbjct: 62 LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
+E G + + EL S + D+ + G + +A + MP K + W
Sbjct: 122 IEMGKQMHCLALK---FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTA 177
Query: 522 LL 523
++
Sbjct: 178 MI 179
>gi|359474850|ref|XP_002277741.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
gi|297744624|emb|CBI37886.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 178/586 (30%), Positives = 295/586 (50%), Gaps = 20/586 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+ I K++ LF QM+ + + P + T + + A L D + Q +HG I+
Sbjct: 60 WSIMIHGYNRNGFRRKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLIL 119
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + + KC + +Y++F+++ + S +A++ GF E +
Sbjct: 120 KYGLDSDFRVVTALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVV 179
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF R +G+ + TV+ L +A + + L +S+H + + + DV+V N+ + Y+
Sbjct: 180 LFNQFRKLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYS 239
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
DL A VF G+E R V+SW +M+ + D+L +R M G DV V
Sbjct: 240 SMLDLDAATRVFEGME--CRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVV 297
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++L+S+ L +GR +H+ I GF ++ + N++I+MYSKCGD+DS+R +FD
Sbjct: 298 MNLISACAILGDLKRGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTG 357
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKW 366
++ VSWTAMI G Q G EAL+L M D + ++ ++S G+ LEL +
Sbjct: 358 KSLVSWTAMILGCVQNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGELALLELCQQ 417
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNG 425
YA G +V N+LI YSKCG + A +F + + +VSW ++ G +NG
Sbjct: 418 LHCYAFESGFPRYRLVQNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGING 477
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
A+ L+H++ + P+ T+L VL AC+H+G ++ G I +++ I P D
Sbjct: 478 HGEIAVALYHEMRKGRENPDAATYLCVLSACSHSGLVDDGLVIFNQMVEERTI--RPSQD 535
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H C+ DLL R G +A +FV K W LL C++H N+ + E A + +L
Sbjct: 536 HCGCIVDLLARAGCFSDAREFVSRYMEKMGPNAWRALLSGCQLHGNVGLAELAARRVCEL 595
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+P V ++N YA GR+ +R MK+ ++ K PG SL +
Sbjct: 596 DPEEPGQVVLLSNVYASVGRFQDAEALRASMKKKELIKNPGISLLN 641
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 193/382 (50%), Gaps = 3/382 (0%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S ++K + A K+F+E+ RDV SW+ M+ G+ + GF + LF MR+ +
Sbjct: 34 SCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQMRISSLVPTSF 93
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T++G+ + L + VH + G+D+D V +++YAKC ++ + VF +
Sbjct: 94 TMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDSYRVFEQL 153
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E +VS +++V+G Y + F++++ + G + TV++L+ + V E+
Sbjct: 154 EN--PGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRACVALESRRL 211
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
+H + LDV+V N+++ MYS D+D+A +F+G+ R +SWT MI+
Sbjct: 212 CESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMINLLVC 271
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+AL LF M G D+V V+++IS C G L+ G+ A G + +
Sbjct: 272 LEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIVCGFGSELPL 331
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-ELD 441
N++I MYSKCG + +R +F K +VSWT MI GC NG EAL L ++ E
Sbjct: 332 TNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYPREALKLLIKMRGEES 391
Query: 442 LRPNRVTFLAVLQACTHTGFLE 463
+ + + VL A LE
Sbjct: 392 FYLDSIMLIGVLSASGELALLE 413
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 4/287 (1%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+S Y K D+ A +F I +R VVSW+ M+ G S+ + M +
Sbjct: 33 LSCYLKSGDIINAGKLFEEIPKR--DVVSWSIMIHGYNRNGFRRKSMELFSQMRISSLVP 90
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARVL 301
T+V +L S V G+ VH + YG D D V+ L++ Y+KCG+ +DS RV
Sbjct: 91 TSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDSYRV- 149
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + + VS +A++SG+ +EA+ LF G +P+ TVL++I C +
Sbjct: 150 FEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRACVALESR 209
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
L + L +V V N+++DMYS + A +F + + V+SWTTMI
Sbjct: 210 RLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMINLL 269
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+AL LF Q+ + + V + ++ AC G L++G I
Sbjct: 270 VCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREI 316
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 119/245 (48%), Gaps = 12/245 (4%)
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
P A++Q +H+ Y D + L+S Y K GDI +A LF+ I R VSW+ M
Sbjct: 4 PLAILQLYSIHTSTQRYPHGSDPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIM 63
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
I GY + G +++ LF M + +P T++ ++ G LG+ GL
Sbjct: 64 IHGYNRNGFRRKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGL 123
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ V AL++ Y+KCG++ D+ +F L +VS + +++G N F EA+ LF+Q
Sbjct: 124 DSDFRVVTALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQ 183
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEK--------GWAISIIQYDDKGISYNPELDHYS 488
+L + PN T L +++AC LE G + + D ++ N LD YS
Sbjct: 184 FRKLGMVPNAATVLTLIRACVA---LESRRLCESIHGMVVKLSLVLDVAVN-NSVLDMYS 239
Query: 489 CMADL 493
M DL
Sbjct: 240 SMLDL 244
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 193/609 (31%), Positives = 303/609 (49%), Gaps = 20/609 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI + + + W+ + V + L ++++M + +I + T + AC KL D
Sbjct: 25 FDRIKQRNAFS-WSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLD 83
Query: 70 LIYSQMIHGH----------IVKSP----FVKCDRLDCAYKIFDEM-AVRDVASWNAMLV 114
+ +M+ +V + F KC L+ A +F M A+RD+ S AM+
Sbjct: 84 VEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIG 143
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ + G + L ++ MR G++ D T + A L K +H +
Sbjct: 144 AYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFG 203
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
++SV N I+ YAKC LK ++ +F ++ ++ VVSWN+M+A T D+ + +
Sbjct: 204 NISVRNALITMYAKCGSLKDSKSLFLTMD--VKDVVSWNAMIAAYTLYGHDKDAFSLFHR 261
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M G D+ T S+L + P+ L GR++H GFD D ++ N LISM+++CG
Sbjct: 262 MCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGS 321
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
++SAR F I + +W M++ YAQ +AL L+ M G PD T S++
Sbjct: 322 LESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDS 381
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C GAL GK+ + S G + +V++ AL++MY+KCGS+ DA++ F + K VVSW
Sbjct: 382 CASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSW 441
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+ MIA A +G EAL+L H + + N VT +VL AC+H G L +G +
Sbjct: 442 SAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQ 501
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D GI + E + DLLGR G LKEA + +MP K TLL CK+H ++
Sbjct: 502 DFGIERDEE--NTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRR 559
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G+ + + LEP + YV + N YA GRWD VA +R M++ VK+ G S
Sbjct: 560 GKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRD 619
Query: 595 KTCTFTAED 603
K F+ D
Sbjct: 620 KIYEFSVGD 628
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 211/452 (46%), Gaps = 11/452 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC + A ++FD + R+ SW+ ++ + Q + L ++ M I D T+
Sbjct: 12 YGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTL 71
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ A + + V +G + DV V + I +AKC L+ AE VF +
Sbjct: 72 SSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGA 131
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+R ++S +M+ K D +L+ Y M G D T ++L + P+ L+ G+
Sbjct: 132 -MRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGK 190
Query: 265 LVHSHGI---HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+H H + H+G ++SV N LI+MY+KCG + ++ LF + + VSW AMI+ Y
Sbjct: 191 HIHKHILESKHFG---NISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYT 247
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
G +A LF M G PD+ T S++ C LE G+ + G +
Sbjct: 248 LYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFA 307
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ N LI M+++CGS+ AR FY++ +K + +W TM+A A + +AL L+ ++
Sbjct: 308 MQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEG 367
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
P+R TF +V+ +C G L +G I + ++ + + ++ + G L
Sbjct: 368 FTPDRFTFSSVVDSCASLGALREG---KFIHECSTSCGFEKDVILGTALVNMYAKCGSLA 424
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+A + K D W ++ A H + E
Sbjct: 425 DAKKSFDGISNK-DVVSWSAMIAASAQHGHAE 455
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 171/352 (48%), Gaps = 7/352 (1%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D + N I Y KC + A VF I++R SW+ +V + ++L Y+
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQR--NAFSWSILVECYVQNAMYQEALEVYKE 58
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ +D T+ S+L++ + +GR+V GF+ DV V +LI +++KCG
Sbjct: 59 MVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGC 118
Query: 295 IDSARVLFDGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
++ A +F + R +S TAMI Y + G D AL ++ M + G PD T +++
Sbjct: 119 LEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILG 178
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C L GK + N+ V NALI MY+KCGS+ D++ LF + K VVS
Sbjct: 179 ACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVS 238
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W MIA L G +A LFH++ L P+ TF ++L AC LE G + ++
Sbjct: 239 WNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLH-VRI 297
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+G ++ + + + + R G L+ A + S+ K + G W T+L A
Sbjct: 298 TARG--FDRDFAMQNNLISMFTRCGSLESARRYFYSIE-KKELGAWNTMLAA 346
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 280/542 (51%), Gaps = 13/542 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC RL A ++FD M VR+ SWNA++ G+A+ + LF M+ V + D T
Sbjct: 140 YAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATF 199
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
L SL++ +H G + V N I++Y++C + +F GI+
Sbjct: 200 AALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQS 259
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRLDV---TTVVSLLSSFVCPEAL 260
R ++SWNSM+ Y D+++ F+ MM +G + D+ T+VVS+ S C +
Sbjct: 260 R--DLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDR- 316
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD---IDSARVLFDGICDRTRVSWTAMI 317
QGR +HS + G + V N +I+MY++ + ++ A FD + + VSW +M+
Sbjct: 317 -QGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSML 375
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+GY+ G +ALR F M A D + + + C L LG+ + G
Sbjct: 376 TGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFS 435
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N V ++LI MYSKCG +GDAR+ F + V W +M+ G A +G+ DLF ++
Sbjct: 436 SNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEM 495
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
++ + + VTF+A+L A +H G +++G I+ + ++HY+C DL GR
Sbjct: 496 LDHKVPLDHVTFVALLTAYSHGGLVDEG--SEILNSMETRYKIPLRMEHYACGVDLYGRA 553
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G+L +A + ++SMP + DA +W TLL AC+IH N+E+ VA LF EP + YV ++
Sbjct: 554 GQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLS 613
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
+ Y+ G W A ++ +MK + K PG S + + +F A+DR H + + +L
Sbjct: 614 SMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEVKNEVHSFNADDRSHPRMDEIFDMLR 673
Query: 618 CL 619
L
Sbjct: 674 ML 675
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 180/380 (47%), Gaps = 7/380 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A ++FDE+ D SWN++L G + RL +M G+ A + ++
Sbjct: 45 LAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRS 104
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
A A+ L + SF + G+ +V + + YAKC L A VF G+ +R V
Sbjct: 105 AAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMP--VRNTV 162
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
SWN+++AG K ++ + M D T +LL++ P + +H
Sbjct: 163 SWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKI 222
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
YG L + V+N I+ YS+CG +R +FDGI R +SW +M+ YA G DEA+
Sbjct: 223 AKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAM 282
Query: 331 RLFFA-MEAAGELPDLVTVLSMISGCGQSGALEL-GKWFDNYACSGGLKDNVMVCNALID 388
R F M +G PD+ + S++S C + G + G+ + GL+ VCNA+I
Sbjct: 283 RFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIA 342
Query: 389 MYSKCGS---IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
MY++ + DA + F +L K VSW +M+ G + +G +AL F + ++ +
Sbjct: 343 MYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTD 402
Query: 446 RVTFLAVLQACTHTGFLEKG 465
A L++C+ L G
Sbjct: 403 EFALSAALRSCSDLAVLRLG 422
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
Query: 283 NTLISMYSKCGD---IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
N L++ YS G + +AR +FD I VSW ++++ + G +A RL M A
Sbjct: 30 NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHAR 89
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G + S + + ELG ++A GL DNV +AL+D+Y+KCG + DA
Sbjct: 90 GLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDA 149
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
R +F +P + VSW +IAG A + + +A++LF ++ ++L P+ TF A+L
Sbjct: 150 RRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALL 203
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 22/311 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLF-RQMKQNDIEPNNLTFPFIAKACAKLS-DLIY 72
+S + WNS + + + F R M+++ ++P+ +F + C++ D
Sbjct: 258 QSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQ 317
Query: 73 SQMIHGHIVK-----------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+ IH +VK + F + ++ AYK FD + +D SWN+ML G
Sbjct: 318 GRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTG 377
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
++ G + LR F MR + D + ++ L L + VHS I G ++
Sbjct: 378 YSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSN 437
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V ++ I Y+KC + A F E + V WNSM+ G + + + M
Sbjct: 438 DFVSSSLIFMYSKCGMVGDARKSF--EEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEM 495
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ + LD T V+LL+++ + +G +++S Y L + + +Y + G
Sbjct: 496 LDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQ 555
Query: 295 IDSARVLFDGI 305
+D A+ L + +
Sbjct: 556 LDKAKELIESM 566
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/401 (39%), Positives = 232/401 (57%), Gaps = 16/401 (3%)
Query: 229 LNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-------FDL--- 277
LNF Y RLD + V+L P ++H H + FD
Sbjct: 64 LNFKLQRSYASLGRLDYS--VALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPE 121
Query: 278 -DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ + +++ Y+K G++D+ARVLFDG+ +R V W MI GY Q G +EAL LF M
Sbjct: 122 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 181
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
A P+ VTVLS++S CGQ GALE G+W +Y + G++ NV V AL+DMYSKCGS+
Sbjct: 182 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 241
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DAR +F + +K VV+W +MI G A++G EAL LF + + L P +TF+ +L AC
Sbjct: 242 EDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 301
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
H+G++ +GW I D+ GI P+++HY CM +LLGR G +++A + V++M I+ D
Sbjct: 302 GHSGWVTEGWDIFNKMKDEYGIE--PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 359
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
+WGTLL AC++H I +GE + L ++ Y+ ++N YA G WDGVA +RTMM
Sbjct: 360 VLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMM 419
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
K + VKK PG S +N K F A H + + Y +L+
Sbjct: 420 KDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLE 460
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 140/263 (53%), Gaps = 6/263 (2%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
++ YAK +L A ++F G+EER V WN M+ G T +++L +R M+ +
Sbjct: 131 LTCYAKHGELDAARVLFDGMEER--DGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKP 188
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ TV+S+LS+ AL GR VHS+ + G +V V L+ MYSKCG ++ AR++F
Sbjct: 189 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 248
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D I D+ V+W +MI GYA G EAL+LF +M G P +T + ++S CG SG +
Sbjct: 249 DKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVT 308
Query: 363 LGKW--FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
G W F+ G++ + ++++ + G + A EL + E V W T++
Sbjct: 309 EG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 367
Query: 420 GCALNGEFVEALDLFHQLMELDL 442
C L+G+ + L++ +L
Sbjct: 368 ACRLHGKIALGEKIVELLVDQNL 390
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 3/215 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K LD A +FD M RD WN M+ G+ Q G L LF M + + VTV
Sbjct: 134 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 193
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + A L + VHS+ + G+ +V V + Y+KC L+ A LVF I++
Sbjct: 194 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 253
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG- 263
+ VV+WNSM+ G ++L ++ M G T + +LS+ + +G
Sbjct: 254 --KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 311
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ + YG + + ++++ + G ++ A
Sbjct: 312 DIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA 346
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I ++ L+LFR+M + +PN +T + AC +L L + +H +I
Sbjct: 158 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 217
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC L+ A +FD++ +DV +WN+M+VG+A GF + L+
Sbjct: 218 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 277
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF +M +G+ +T +G+ A H+
Sbjct: 278 LFKSMCRMGLHPTNITFIGILSACGHS 304
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 151/457 (33%), Positives = 258/457 (56%), Gaps = 5/457 (1%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
++ VH+ + G D+ + N + +YA+ + A +F G+ +R +W+ MV G
Sbjct: 19 IRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT--MRDSKTWSVMVGGF 76
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+R ++ G D T+ ++ + L GR++H + +G D
Sbjct: 77 AKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDH 136
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V +L+ MY+KC ++ A+ LF+ + + V+WT MI YA + E+L LF M
Sbjct: 137 FVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYAD-CNAYESLVLFDRMREE 195
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G +PD V ++++++ C + GA+ ++ ++Y G +V++ A+IDMY+KCGS+ A
Sbjct: 196 GVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESA 255
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
RE+F + EK V+SW+ MIA +G +A+DLFH ++ + PNRVTF+++L AC+H
Sbjct: 256 REVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHA 315
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G +E+G +++ + P++ HY+CM DLLGR G+L EAL +++M ++ D +W
Sbjct: 316 GLIEEGLRFFNSMWEEHAV--RPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLW 373
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
LL AC+IH +E+ E A L +L+P + YV ++N YA G+W+ VA R MM +
Sbjct: 374 SALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQR 433
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
++KK PG + ++ KT F+ DR H +S+ Y +L
Sbjct: 434 KLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEML 470
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 198/402 (49%), Gaps = 27/402 (6%)
Query: 61 AKACAKL----SDLIYSQMIHGHIVKS--------------PFVKCDRLDCAYKIFDEMA 102
A++C L ++ + + +H H+V + + + +D AY +FD +
Sbjct: 3 AESCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT 62
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
+RD +W+ M+ GFA+ G F + G+ D T+ + + L + +
Sbjct: 63 MRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRV 122
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCT 220
+H + G+ +D VC + + YAKC ++ A+ +F ER+ + +V+W M+
Sbjct: 123 IHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLF----ERMLSKDLVTWTVMIGAYA 178
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+ + +SL + M G D +V+++++ A+ + R + + + GF LDV
Sbjct: 179 DCNAY-ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVI 237
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
+ +I MY+KCG ++SAR +FD + ++ +SW+AMI+ Y G +A+ LF M +
Sbjct: 238 LGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCA 297
Query: 341 ELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
LP+ VT +S++ C +G +E G ++F++ ++ +V ++D+ + G + +A
Sbjct: 298 ILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEA 357
Query: 400 RELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
L A+ EK W+ ++ C ++ + A + L+EL
Sbjct: 358 LRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLEL 399
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 23/296 (7%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVK 87
FR++ + + P+N T PF+ + C +DL ++IH ++K + K
Sbjct: 89 FRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAK 148
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C ++ A ++F+ M +D+ +W M+ +A E+++ LF MR G+ D V ++ +
Sbjct: 149 CIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLV-LFDRMREEGVVPDKVAMVTV 207
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A + + + + + G DV + I YAKC ++ A VF ++E +
Sbjct: 208 VNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKE--K 265
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQG-R 264
V+SW++M+A Y + D+++ + M+ + T VSLL + C A + +G R
Sbjct: 266 NVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLL--YACSHAGLIEEGLR 323
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISG 319
+S + DV ++ + + G +D A L + + ++ W+A++
Sbjct: 324 FFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + W I + N A+++L+LF +M++ + P+ + + ACAKL + ++
Sbjct: 164 SKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARF 222
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+ +IV++ F KC ++ A ++FD M ++V SW+AM+ + G
Sbjct: 223 ANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGR 282
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVSVCN 180
++ + LF+ M I + VT + L A HA + L+ +S V DV
Sbjct: 283 GKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYT 342
Query: 181 TWISSYAKC----DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ + + L++ E + +ERL W++++ C K +
Sbjct: 343 CMVDLLGRAGRLDEALRLIEAMTVEKDERL-----WSALLGACRIHSKME 387
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 282/556 (50%), Gaps = 27/556 (4%)
Query: 24 SQIREAVNKNEAH--KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
S I A ++ ++H L L+R M + P L + +AC L++L +++H H++
Sbjct: 386 STIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVI 445
Query: 82 KSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+S + KC + A K+FD + R WN+M+ + + E L L
Sbjct: 446 ESGLEGDLVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEKDPHE-ALHL 504
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M+ G+ D +T M + A ++A L +++H+ + G ADV V + YAK
Sbjct: 505 FREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAK 564
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C L A VF + R VVSWN+M+A G + +++ M G R D T
Sbjct: 565 CGSLGEARGVFDSMV--FRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFT 622
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
SLL++ P LV GR +HS + D+ ++ LI+MY+ CG +++AR +FD I
Sbjct: 623 SLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSN 682
Query: 309 TRVS------WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+R WT+MI+ Y Q G+ +AL L+ M + D VT +S+++ C L
Sbjct: 683 SRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLR 742
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ GL +V V N+++ MY KCGS +A +F K + WT +IA A
Sbjct: 743 QGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYA 802
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+G +AL +F +L + + + +TF+A+L AC+H G +E+G + GI P
Sbjct: 803 RHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEF-FASMAELGI--EP 859
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
++H+SC+ DLL R G L A +F+ MP+ ++ + LL AC++H ++E VA L
Sbjct: 860 NMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEKL 919
Query: 543 FKLEPHSAAPYVEMAN 558
L+P S APYV ++N
Sbjct: 920 EALDPESEAPYVTLSN 935
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 235/478 (49%), Gaps = 26/478 (5%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R+ R ++ W I + +L LFR+M PN++TF I C S L
Sbjct: 275 RMKRRDVVS-WTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLE 333
Query: 72 YSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ IH +V+S + +C + + +FD M+VRD SW+ +++ +
Sbjct: 334 QGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACS 393
Query: 118 QM-GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
+ + L L+ +M G+ + + + +A L K VH+ I G++ D+
Sbjct: 394 REDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL 453
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
V + ++ YAKC + A VF I R R + WNSM+ D + +L+ +R M
Sbjct: 454 -VGISLVNMYAKCGTVGEARKVFDRINNRSRIL--WNSMITAYQEKDPHE-ALHLFREMQ 509
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
G D T +++L++ V L GR +H+ + GF DV V L +MY+KCG +
Sbjct: 510 PEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLG 569
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
AR +FD + R VSW MI+ Y Q D + A+ L +AM+ G PD T S+++ C
Sbjct: 570 EARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACS 629
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL------PEKI 410
L G+ ++ L++++++ LI MY+ CGS+ +ARE+F + +
Sbjct: 630 DPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRD 689
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+ WT+MI +GE+ +AL+L+ Q+ + +RVTF++VL AC H L +G AI
Sbjct: 690 LFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAI 747
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 245/535 (45%), Gaps = 47/535 (8%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDR 90
M + I P+ + + AC KL L ++I + + +VKC
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
LD A + F M RDV SW M+ ++Q G L+LF M L G + VT + +
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC---DDLKMAELVFCGIEERLR 207
L + +H+ + +++ V V N+ + Y++C +D +M + R
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFA----RMKRR 176
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VVSW M+ + KF S+ +R M+ G + T VS+LS P L QGR +H
Sbjct: 177 DVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIH 236
Query: 268 SHGIHYGFD--LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+ + + LD+ V+N I+MY KCG +D A F + R VSWT MI Y+Q G
Sbjct: 237 ALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGK 296
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+L+LF M G P+ VT +S++SGC LE G+ L+ +V+V N+
Sbjct: 297 FSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANS 356
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRP 444
L+ MYS+C S D+R LF + + VSW+T+I C+ +AL L+ ++ + P
Sbjct: 357 LLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMP 416
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI------SIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ VL+AC L+ G + S ++ D GIS + ++ + G
Sbjct: 417 KTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGIS----------LVNMYAKCG 466
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK-LEPHSAAP 552
+ EA + +S +W +++ A + E + A LF+ ++P +P
Sbjct: 467 TVGEARKVFDRINNRSRI-LWNSMITAYQ-----EKDPHEALHLFREMQPEGVSP 515
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 245/532 (46%), Gaps = 27/532 (5%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R+ R ++ W I + +L LFR+M PN++TF I C S L
Sbjct: 70 RMKRRDVVS-WTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLE 128
Query: 72 YSQMIHGHIVKSP--------------FVKCDRL-DCAYKIFDEMAVRDVASWNAMLVGF 116
+ IH +V+S + +C D + F M RDV SW M+ +
Sbjct: 129 QGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAY 188
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA-- 174
+Q G ++LF M L G + VT + + L + +H+ + +++
Sbjct: 189 SQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHL 248
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D+ V N I+ Y KC L A F ++ R VVSW M+ + KF SL +R
Sbjct: 249 DIGVLNLTINMYVKCGCLDGAVQTFARMKR--RDVVSWTVMIGAYSQDGKFSLSLQLFRE 306
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G + T VS+LS P L QGR +H+ + + V V N+L+ MYS+C
Sbjct: 307 MLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRS 366
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQK-GDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+ +R LFD + R VSW+ +I +++ +AL L+ +M G +P + + ++
Sbjct: 367 WEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLE 426
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
CG L+ GK + GL+ + +V +L++MY+KCG++G+AR++F + + +
Sbjct: 427 ACGSLAELKGGKLVHAHVIESGLEGD-LVGISLVNMYAKCGTVGEARKVFDRINNRSRIL 485
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W +MI EAL LF ++ + P+R+TF+ VL AC + LE G I
Sbjct: 486 WNSMITAYQEKDPH-EALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIV 544
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
D + ++ + + ++ + G L EA SM + D W ++ A
Sbjct: 545 DS---GFAADVRVATALFNMYAKCGSLGEARGVFDSMVFR-DVVSWNNMIAA 592
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 211/452 (46%), Gaps = 23/452 (5%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI S I WNS I A + + H+ L LFR+M+ + P+ +TF + AC +D
Sbjct: 475 FDRINNRSRI-LWNSMI-TAYQEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAAD 532
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + IH IV S F KC L A +FD M RDV SWN M+
Sbjct: 533 LENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAA 592
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ Q E + L + M+L G++ D T L A L + +HS+ ++ D
Sbjct: 593 YVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLEND 652
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGI----EERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
+ + I+ YA C L A +F I + R + W SM+ ++ +L
Sbjct: 653 IVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALEL 712
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
Y M D T +S+L++ L QG+ +H+ + G DV+V N+++ MY K
Sbjct: 713 YEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGK 772
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-ELPDLVTVLS 350
CG D A ++F+ + WTA+I+ YA+ G ++AL +F + G EL +L T ++
Sbjct: 773 CGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNL-TFVA 831
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
M+S C G +E G F G++ N+ + L+D+ ++ G + A E +P
Sbjct: 832 MLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAA 891
Query: 411 -VVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+ T ++A C ++G+ A + +L LD
Sbjct: 892 NTIVLTALLAACRVHGDVERARRVAEKLEALD 923
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 277/566 (48%), Gaps = 46/566 (8%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD + D ++N+++ ++ G + L L ++ GI + T+ + +A
Sbjct: 60 ARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSR 119
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
A+ + H I +G V V N + S A L+ + +F + R VVSWN
Sbjct: 120 ARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPH-RNVVSWN 178
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGI 271
+M+ GC + ++ +R M G DV T VSLL VC + L GRLVH H +
Sbjct: 179 TMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLL--LVCSKEGNLEVGRLVHCHML 236
Query: 272 HYGFDLDVSVINTLISMYSKCGD-------------------------------IDSARV 300
G +D+ + N L+ MY KCGD +D+AR
Sbjct: 237 ASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARD 296
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F+ + +R +SW AMIS Y Q G E L L+ M++ G PD VT+ ++S GQ+G
Sbjct: 297 WFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGD 356
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L G+ Y V V N+LIDMY++CG + + LF +P K +SW +I
Sbjct: 357 LASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGA 416
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A++G EA+ F ++ P+ +TF+ +L AC+H G LE G QY K + +
Sbjct: 417 LAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDG------QYYFKAMRH 470
Query: 481 ----NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
PE++HY+CM DLLGR G L +A+D ++ MP+K D +WG L+ AC+IH ++EIG+
Sbjct: 471 IYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGK 530
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
L +LE + +V ++N +W+ + +R +M+ KK G S IN
Sbjct: 531 LAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSI 590
Query: 597 CTFTAEDRYHAESELTYPVLDCLALH 622
F ED H S Y +D LA H
Sbjct: 591 HEFGVEDIRHESSSQIYAAVDQLAYH 616
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 205/466 (43%), Gaps = 46/466 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS IR N + L L R + + I PN T PF+ KAC++ ++ HG +
Sbjct: 75 YNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEHALATHGVAI 134
Query: 82 KSPFVK--------------CDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQMGFLENVL 126
K +V+ L + ++F EMA R+V SWN M+ G AQ G
Sbjct: 135 KLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEAC 194
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF MR G+ AD T + L +L + + VH + G D+ + N + Y
Sbjct: 195 ALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMY 254
Query: 187 AKCDDLKMAELVF---------------CGIEER--------------LRTVVSWNSMVA 217
KC DL MA F C + + R ++SWN+M++
Sbjct: 255 GKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMIS 314
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G +F ++L Y M G D T+ +LS L GR++H + D
Sbjct: 315 CYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDP 374
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
V+V+N+LI MY++CG +D++ LF + ++ +SW +I A G EA+ F AM
Sbjct: 375 GVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMV 434
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ PD +T + ++S C G LE G+ +F +K V ++D+ + G +
Sbjct: 435 SDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHL 494
Query: 397 GDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
A +L +P K VV W +I C ++G QL+EL+
Sbjct: 495 AKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELE 540
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 14/151 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I WN+ I V +TL L+ +MK + P+ +T + + DL +MIH
Sbjct: 305 NIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIH 364
Query: 78 GHIVKS---P-----------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+I S P + +C ++D + +F EM ++ SWN ++ A G +
Sbjct: 365 CYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQ 424
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ F M D +T +GL A H
Sbjct: 425 EAVMFFRAMVSDAFSPDEITFVGLLSACSHG 455
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 316/641 (49%), Gaps = 46/641 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + + + + LF +M+ I PN TF + A A L Q +H V
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 82 K-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE-NVL 126
K S FV KC ++ A +F+ M RD+ SWN ++ G Q+ E L
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL-QLNECELEAL 287
Query: 127 RLFYNMRLVG---IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+LF+ R Q+ + TV+ L + K L+L + +HS + G +V
Sbjct: 288 QLFHESRATMGKMTQSTYATVIKLCA---NLKQLALARQLHSCVLKHGFHLTGNVMTALA 344
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM-----MYN 238
+Y+KC +L A +F + R VVSW ++++GC ++ + M M N
Sbjct: 345 DAYSKCGELADALNIF-SMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
F SL S + P+ + +++ ++ H F V L++ YSK G + A
Sbjct: 404 EFTYSAMLKASL--SILPPQ--IHAQVIKTNYQHIPF-----VGTALLASYSKFGSTEDA 454
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG-Q 357
+F I + V+W+AM+S +AQ GD + A LF M G P+ T+ S+I C
Sbjct: 455 LSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACP 514
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
S ++ G+ F + D + V +AL+ MYS+ G+I A+ +F ++ +VSW +M
Sbjct: 515 SAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSM 574
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
I+G A +G ++A++ F Q+ ++ + VTFLAV+ CTH G + +G QY D
Sbjct: 575 ISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQ-----QYFDSM 629
Query: 478 I---SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+ NP ++HY+CM DL R GKL E + ++ MP + A +W TLL AC++H N+E+
Sbjct: 630 VRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVEL 689
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G++ A L LEPH ++ YV ++N YA G+W +R +M +VKK G S I
Sbjct: 690 GKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKN 749
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
K +F A D+ H S+ Y L + +++ YS + ++
Sbjct: 750 KVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFV 790
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 231/518 (44%), Gaps = 30/518 (5%)
Query: 7 PP----RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
PP L+ I R N + + + + L F ++ + ++ T + K
Sbjct: 48 PPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLK 107
Query: 63 ACAKLSDLIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDVA 107
AC + D + + +H VK ++KC + ++F+ M ++V
Sbjct: 108 ACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVV 167
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+W ++L G A V+ LF+ MR GI + T + A L L + VH+
Sbjct: 168 TWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQS 227
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
+ G + V VCN+ ++ YAKC ++ A+ VF +E R +VSWN+++AG + +
Sbjct: 228 VKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMET--RDMVSWNTLMAGLQLNECELE 285
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+L + ++ +T +++ + L R +HS + +GF L +V+ L
Sbjct: 286 ALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALAD 345
Query: 288 MYSKCGDIDSARVLFDGIC-DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
YSKCG++ A +F R VSWTA+ISG Q GD+ A+ LF M +P+
Sbjct: 346 AYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEF 405
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T +M+ ++ L + V AL+ YSK GS DA +F +
Sbjct: 406 TYSAML----KASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMI 461
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT-HTGFLEKG 465
+K VV+W+ M++ A G+ A LF+++ ++PN T +V+ AC + +++G
Sbjct: 462 EQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQG 521
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
I + Y+ + S + + RKG + A
Sbjct: 522 RQFHAISIKYR---YHDAICVSSALVSMYSRKGNIDSA 556
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 145/291 (49%), Gaps = 8/291 (2%)
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDS 297
G +D T+ +L + V G +H + G D +VS +L+ MY KCG +
Sbjct: 94 GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
+F+G+ + V+WT++++G A E + LFF M A G P+ T S++S
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVAS 213
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
GAL+LG+ + G + +V VCN+L++MY+KCG + DA+ +F + + +VSW T+
Sbjct: 214 QGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTL 273
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDD 475
+AG LN +EAL LFH+ + + T+ V++ C + L + ++++
Sbjct: 274 MAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKH-- 331
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
++ + + +AD + G+L +AL+ + W ++ C
Sbjct: 332 ---GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 137/308 (44%), Gaps = 32/308 (10%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC-AKLSDLIYSQ 74
S + W + I + + ++LF +M+++ + PN T+ + KA + L I++Q
Sbjct: 366 SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQ 425
Query: 75 MIHGHIVKSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+I + PFV K + A IF + +DV +W+AML AQ G E
Sbjct: 426 VIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGA 485
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQA-AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
LF M + GI+ + T+ + A A + + + H+ I + V + +S
Sbjct: 486 TYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVS 545
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y++ ++ A++VF + R +VSWNSM++G ++ +R M +G ++D
Sbjct: 546 MYSRKGNIDSAQIVF--ERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDG 603
Query: 245 TTVVSLLSSFVCPEALVQGR-----LVHSHGI-----HYGFDLDVSVINTLISMYSKCGD 294
T ++++ +V+G+ +V H I HY ++ +YS+ G
Sbjct: 604 VTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA---------CMVDLYSRAGK 654
Query: 295 IDSARVLF 302
+D L
Sbjct: 655 LDETMSLI 662
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 192/645 (29%), Positives = 318/645 (49%), Gaps = 32/645 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+ WNS + +++++ L FR M + + P +F + A A++ +
Sbjct: 84 VASWNSLL-NPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVA 142
Query: 77 HGHIVKSP-----------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
H K P + K + A ++FD+M R+ SW AM+ G+A
Sbjct: 143 HAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATG 202
Query: 120 GFLENVLRLFYNM--RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI--GVDAD 175
E LF M + +FV L+ ++ L LL V G+ + G+
Sbjct: 203 KCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVP---LGLLIGVQLHGLVLKDGLVGF 259
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
VSV N+ ++ YAK + + A VF +ER ++W++M+ G + D + + M
Sbjct: 260 VSVENSLVTMYAKAECMDAAMAVFGSSKER--NSITWSAMITGYAQNGEADCAATMFLQM 317
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
GF T V +L++ ALV G+ H + GF+ V V + L+ MY+KCG
Sbjct: 318 HSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCT 377
Query: 296 DSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
A+ F + D V WTAMI+G+ Q G+ +EAL L+ M+ G +P +TV S++
Sbjct: 378 GDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRA 437
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C ALE GK G V AL MYSKCG++ D+ +F +P++ ++SW
Sbjct: 438 CACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISW 497
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
++I+G + +G +ALDLF ++ + P+ +TF+ VL AC+H G +++GW
Sbjct: 498 NSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSK 557
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D G+ P+LDHY+C+ D+L R G+LKEA DF++S+ I +W +L AC+ + ++
Sbjct: 558 DYGLI--PKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDV 615
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G Y L +L ++ Y+ ++N YA +W+ V +R +M+ V K PG S +N
Sbjct: 616 GAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNN 675
Query: 595 KTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
+ F ++ H E+E L LA H ++E Y K++ + E
Sbjct: 676 QVNVFVVGEQQHPEAEKINVELIRLAKHMKDEGYRQTYKFLFDDE 720
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 189/387 (48%), Gaps = 18/387 (4%)
Query: 91 LDCAYKIFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV-----T 143
L A+ +F ++ +RDVASWN++L ++ L + R + D V +
Sbjct: 67 LGAAFAVFADIPAGLRDVASWNSLLNPLSR----HQPLAALSHFRSMMSSTDAVLPTPHS 122
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA---DVSVCNTWISSYAKCDDLKMAELVFC 200
+ AA S H+F + + +V V ++ Y K + A VF
Sbjct: 123 FAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFD 182
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEA 259
+ R VSW +MV+G G +++ +R M+ + ++LS+ P
Sbjct: 183 QMPH--RNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLG 240
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L+ G +H + G VSV N+L++MY+K +D+A +F +R ++W+AMI+G
Sbjct: 241 LLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITG 300
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
YAQ G+ D A +F M +AG P T + +++ GAL +GK G +
Sbjct: 301 YAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQ 360
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
V V +AL+DMY+KCG GDA++ F+ L + VV WT MI G NGE EAL L+ ++
Sbjct: 361 VYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMD 420
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + P+ +T +VL+AC LE G
Sbjct: 421 KEGVMPSYLTVTSVLRACACLAALEPG 447
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 160/383 (41%), Gaps = 38/383 (9%)
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDD--LKMAELVFCGIEERLRTVVSWNSMVAGC 219
++H + + G + V N+ I+ Y L A VF I LR V SWNS++
Sbjct: 35 ALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNPL 94
Query: 220 TYGDKFDDSLNFYRHMMYN-----------------GFRLDVTTVVSLLSSFVCPEALVQ 262
+ +L+ +R MM + R+ + ++ +F C
Sbjct: 95 SRHQPL-AALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFAC------ 147
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
+L S G + +V V L++MY K G I AR +FD + R VSW AM+SGYA
Sbjct: 148 -KLPSSSGSN-----NVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYAT 201
Query: 323 KGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
+EA LF M E E + V +++S L +G GL V
Sbjct: 202 GKCSEEAFELFRLMLQECPLEKNEFVAT-AVLSAVSVPLGLLIGVQLHGLVLKDGLVGFV 260
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V N+L+ MY+K + A +F + E+ ++W+ MI G A NGE A +F Q+
Sbjct: 261 SVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSA 320
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
P TF+ +L A + G L G + + + ++ S + D+ + G
Sbjct: 321 GFSPTEFTFVGILNASSDMGALVVGKQAHGLMVK---LGFERQVYVKSALVDMYAKCGCT 377
Query: 501 KEALDFVQSMPIKSDAGIWGTLL 523
+A D + D IW ++
Sbjct: 378 GDAKDGFHQLYDVDDVVIWTAMI 400
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 209/336 (62%), Gaps = 2/336 (0%)
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
+ +I+ Y+K G ID ARVLFDG+ +R + W MI GYAQ G +E L LF M A
Sbjct: 9 LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
P+ VTVL+++S CGQ+GALE G+W +Y + G+ NV V +LIDMYSKCGS+ DAR
Sbjct: 69 RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
+F + K VV+W +M+ G A++G +AL LF ++ + +P +TF+ VL AC+H G
Sbjct: 129 VFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGL 188
Query: 462 LEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
+ +GW D+ GI P+++HY CM +LLGR G L+EA + V++M I D +WGT
Sbjct: 189 VSEGWKFFYSMKDEYGIE--PKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGT 246
Query: 522 LLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQV 581
LL AC++H NI +GE +A L ++ YV ++N YA G W+GVA +RT+MK +
Sbjct: 247 LLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGF 306
Query: 582 KKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
+K PG S +N K F A D H +S Y +L+
Sbjct: 307 EKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLE 342
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 133/245 (54%), Gaps = 4/245 (1%)
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I+ YAK + A ++F G+EER + WN M+ G ++ L +R M+ R
Sbjct: 13 ITCYAKYGMIDEARVLFDGLEER--DAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRP 70
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ TV+++LS+ AL GR VHS+ + G ++V V +LI MYSKCG ++ AR++F
Sbjct: 71 NEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVF 130
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ I ++ V+W +M+ GYA G +ALRLF M G P +T + +++ C +G +
Sbjct: 131 ERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVS 190
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAG 420
G K+F + G++ V ++++ + G + +A EL + ++ V W T++
Sbjct: 191 EGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGA 250
Query: 421 CALNG 425
C L+G
Sbjct: 251 CRLHG 255
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 8/246 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K +D A +FD + RD WN M+ G+AQ G L LF M ++ + VTV
Sbjct: 16 YAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTV 75
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + A L + VHS+ + G+ +V V + I Y+KC L+ A LVF E
Sbjct: 76 LAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVF----E 131
Query: 205 RL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R+ + VV+WNSMV G D+L ++ M G++ T + +L++ + +
Sbjct: 132 RISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSE 191
Query: 263 G-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGY 320
G + +S YG + V ++++ + G ++ A L + D+ V W ++
Sbjct: 192 GWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGAC 251
Query: 321 AQKGDL 326
G++
Sbjct: 252 RLHGNI 257
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I ++ LLLFRQM + PN +T + AC + L + +H +I
Sbjct: 40 WNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIE 99
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC L+ A +F+ ++ +DV +WN+M+VG+A GF ++ LR
Sbjct: 100 NNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALR 159
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
LF M ++G Q +T +G+ A HA +S
Sbjct: 160 LFKEMCMIGYQPTDITFIGVLNACSHAGLVS 190
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 267/548 (48%), Gaps = 29/548 (5%)
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+W +++ + G + L F M G D + ++ K L +SVH
Sbjct: 73 AWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCI 132
Query: 168 IHIGVDADVSVCNTWISSYAKCDDL---------------------KMAELVFCGIEERL 206
I +G+ D+ CN ++ Y+K L K E + G ++
Sbjct: 133 IRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKV 192
Query: 207 ------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
R +VSWN++++G +D+L R M R D T+ S+L F L
Sbjct: 193 FEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNL 252
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
++G+ +H + I G+D DV + ++LI MY+KC +D + +F + +SW ++I+G
Sbjct: 253 LKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGC 312
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q G DE L+ F M A P+ V+ S++ C L LGK Y NV
Sbjct: 313 VQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNV 372
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ +AL+DMY+KCG+I AR +F + +VSWT MI G AL+G +A+ LF ++
Sbjct: 373 FIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVE 432
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
++PN V F+AVL AC+H G +++ W D I P L+HY+ +ADLLGR G+L
Sbjct: 433 GVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRII--PGLEHYAAVADLLGRVGRL 490
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
+EA +F+ M I+ +W TLL AC++H NIE+ E V+ LF ++P + YV ++N Y
Sbjct: 491 EEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIY 550
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
+ GRW +R M+ +KK P S I K F A D+ H + L L
Sbjct: 551 SAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLL 610
Query: 621 LHSREEAY 628
E Y
Sbjct: 611 EQMEREGY 618
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 233/520 (44%), Gaps = 53/520 (10%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
N + T W S IR + +L F QM + P++ FP + K+C + D
Sbjct: 62 FNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKD 121
Query: 70 LIYSQMIHGHIVK-----------------SPFVKCDRLDCAYKIFDE------------ 100
L + + +HG I++ S F + ++ K+FDE
Sbjct: 122 LRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEK 181
Query: 101 --------------MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
M RD+ SWN ++ G AQ G E+ L + M ++ D T+
Sbjct: 182 ESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSS 241
Query: 147 LTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ I A++++LL K +H + I G DADV + ++ I YAKC + + VF + +
Sbjct: 242 VL--PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQ 299
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+SWNS++AGC FD+ L F++ M+ + + + S++ + L G+
Sbjct: 300 --HDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H + I FD +V + + L+ MY+KCG+I +AR +FD + VSWTAMI GYA G
Sbjct: 358 QLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG 417
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVC 383
+A+ LF ME G P+ V +++++ C +G + E K+F++ + +
Sbjct: 418 HAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHY 477
Query: 384 NALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
A+ D+ + G + +A E + E W+T++A C ++ A + +L +D
Sbjct: 478 AAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVD- 536
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
P + +L K I DKG+ P
Sbjct: 537 -PQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKP 575
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 161/348 (46%), Gaps = 31/348 (8%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L Q K S K +H+ + + + S+ +T +S Y+ + L + L+F +
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSP- 68
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
T ++W S++ T F SL+F+ M+ +G D S+L S + L G V
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDID-----------------------------S 297
H I G D+ N L++MYSK ++ S
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
R +F+ + R VSW +ISG AQ G ++AL + M A PD T+ S++ +
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
L GK YA G +V + ++LIDMY+KC + D+ +FY LP+ +SW ++
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
IAGC NG F E L F Q++ ++PN V+F +++ AC H L G
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLG 356
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 34/277 (12%)
Query: 280 SVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
S+++T++S+YS + + ++F+ + T ++W ++I Y G +L F M A
Sbjct: 40 SLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLA 99
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS--- 395
+G+ PD S++ C L G+ G+ ++ CNAL++MYSK S
Sbjct: 100 SGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEE 159
Query: 396 --------------------------IGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+G R++F +P++ +VSW T+I+G A NG +
Sbjct: 160 VNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHED 219
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
AL + ++ DLRP+ T +VL L KG I + Y+ ++ S
Sbjct: 220 ALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRN---GYDADVFIGSS 276
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ D+ + ++ ++ +P + D W +++ C
Sbjct: 277 LIDMYAKCTRVDDSCRVFYMLP-QHDGISWNSIIAGC 312
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/560 (30%), Positives = 307/560 (54%), Gaps = 22/560 (3%)
Query: 73 SQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG-FLENVLRLFYN 131
S ++ G+ + + + A ++FDEM+ +D+ SWN++L G +Q G F + +F +
Sbjct: 207 SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRD 266
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M G++ D V+ + H L L + +H I G ++ + V N +S Y+KC
Sbjct: 267 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 326
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
L+ + VF + ER VVSW +M++ DD+++ + +M ++G + T V L+
Sbjct: 327 LEAVKSVFHQMSER--NVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
++ C E + +G +H I GF + SV N+ I++Y+K ++ A+ F+ I R +
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG--QSGALELGKWFDN 369
SW AMISG+AQ G EAL++F + AA +P+ T S+++ + +++ G+
Sbjct: 440 SWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHA 498
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+ GL +V +AL+DMY+K G+I ++ ++F + +K WT++I+ + +G+F
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 558
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHY 487
++LFH++++ ++ P+ VTFL+VL AC G ++KG+ I + + YN P +HY
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE----VYNLEPSHEHY 614
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SCM D+LGR G+LKEA + + +P + ++L +C++H N+++G VA +++P
Sbjct: 615 SCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKP 674
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT-----FTAE 602
+ YV+M N YA WD A IR M++ V K G S + + F++
Sbjct: 675 ELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSG 734
Query: 603 DRYHAESELTYPVLDCLALH 622
D+ H +S+ Y +++ + L
Sbjct: 735 DKSHPKSDEIYRMVEIIGLE 754
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 246/555 (44%), Gaps = 50/555 (9%)
Query: 23 NSQIREAVNKNEAHKTLLLFR---QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
N I E++ +N + L +F+ Q+ + +T KAC DL IHG
Sbjct: 44 NHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGF 101
Query: 80 IVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
S F K R D A IF+ + DV SWN +L GF +
Sbjct: 102 STTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIA 158
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L M+ G+ D T + ++ L + S + G+++D+ V N++I+
Sbjct: 159 LNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITM 218
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRLDV 244
Y++ + A VF E + ++SWNS+++G + F +++ +R MM G LD
Sbjct: 219 YSRSGSFRGARRVF--DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDH 276
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ S++++ L R +H I G++ + V N L+S YSKCG +++ + +F
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +R VSWT MIS + D+A+ +F M G P+ VT + +I+ + ++ G
Sbjct: 337 MSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
G V N+ I +Y+K ++ DA++ F + + ++SW MI+G A N
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD-------DKG 477
G EAL +F + PN TF +VL A F E IS+ Q G
Sbjct: 452 GFSHEALKMFLS-AAAETMPNEYTFGSVLNA---IAFAED---ISVKQGQRCHAHLLKLG 504
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
++ P + S + D+ ++G + E+ M K+ +W +++ A H + E
Sbjct: 505 LNSCPVVS--SALLDMYAKRGNIDESEKVFNEMSQKNQF-VWTSIISAYSSHGDFET--- 558
Query: 538 VAYCLFKLEPHSAAP 552
V K+ + AP
Sbjct: 559 VMNLFHKMIKENVAP 573
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 207/427 (48%), Gaps = 35/427 (8%)
Query: 22 WNSQIREAVNKNE-AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WNS + + + +++FR M + +E ++++F + C +DL ++ IH
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 302
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G+I+ S + KC L+ +F +M+ R+V SW M+ ++ +
Sbjct: 303 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAV 357
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F NMR G+ + VT +GL A + + +H I G ++ SV N++I+ Y
Sbjct: 358 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 417
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY----RHMMYNGFRL 242
AK + L+ A+ F I R ++SWN+M++G ++L + M N +
Sbjct: 418 AKFEALEDAKKAFEDI--TFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEY-- 473
Query: 243 DVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
T S+L++ E ++ QG+ H+H + G + V + L+ MY+K G+ID +
Sbjct: 474 ---TFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEK 530
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + + + WT++IS Y+ GD + + LF M PDLVT LS+++ C + G
Sbjct: 531 VFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGM 590
Query: 361 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW-TTMI 418
++ G + F+ L+ + + ++DM + G + +A EL +P S +M+
Sbjct: 591 VDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSML 650
Query: 419 AGCALNG 425
C L+G
Sbjct: 651 GSCRLHG 657
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 260/477 (54%), Gaps = 11/477 (2%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
LS ++ HS + + +D ++ I+ Y++C + A VF I R +VSWNSM+
Sbjct: 132 LSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRR--DLVSWNSMI 189
Query: 217 AGCTYGDKFDDSLNFYRHM-MYNGFRLDVTTVVSLLSSFVCPEA--LVQGRLVHSHGIHY 273
AG +++ + M +GF D ++VS+L + C E L GR V +
Sbjct: 190 AGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGA--CGELGDLELGRWVEGFVVER 247
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G L+ + + LISMY+KCGD+ SAR +FDG+ R ++W A+ISGYAQ G DEA+ LF
Sbjct: 248 GMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLF 307
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
AM+ + +T+ +++S C GAL+LGK D YA G + ++ V ALIDMY+KC
Sbjct: 308 HAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKC 367
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL--DLRPNRVTFLA 451
GS+ A+ +F +P+K SW MI+ A +G+ EAL LF + + RPN +TF+
Sbjct: 368 GSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVG 427
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
+L AC H G + +G+ + + G+ P+++HYSCM DLL R G L EA D ++ MP
Sbjct: 428 LLSACVHAGLVNEGYRLFDMMSTLFGLV--PKIEHYSCMVDLLARAGHLYEAWDLIEKMP 485
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
K D G LL AC+ N++IGE V + +++P ++ Y+ + YA W+ A
Sbjct: 486 EKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSAR 545
Query: 572 IRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+R +M++ + K PG S + F A D +S ++D L + E Y
Sbjct: 546 MRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGY 602
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 197/390 (50%), Gaps = 20/390 (5%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLS---------DLIYSQMIHG-----HIVKS 83
L LF +M + PNN TFPF +CA L+ L++ +H H + +
Sbjct: 100 ALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSLIT 159
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFV 142
+ +C R+ A K+FDE+ RD+ SWN+M+ G+A+ G + +F M R G + D +
Sbjct: 160 MYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEM 219
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+++ + A L L + V F + G+ + + + IS YAKC DL A +F G+
Sbjct: 220 SLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGM 279
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R V++WN++++G D++++ + M + + T+ ++LS+ AL
Sbjct: 280 AA--RDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDL 337
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ + + GF D+ V LI MY+KCG + SA+ +F + + SW AMIS A
Sbjct: 338 GKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALAS 397
Query: 323 KGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDN 379
G EAL LF M E G P+ +T + ++S C +G + G + FD + GL
Sbjct: 398 HGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPK 457
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEK 409
+ + ++D+ ++ G + +A +L +PEK
Sbjct: 458 IEHYSCMVDLLARAGHLYEAWDLIEKMPEK 487
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 160/361 (44%), Gaps = 52/361 (14%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I A + + +F +M + D EP+ ++ + AC +L DL + + G +
Sbjct: 185 WNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 244
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ S + KC L A +IFD MA RDV +WNA++ G+AQ G + +
Sbjct: 245 VERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAI 304
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF+ M+ + + +T+ + A L L K + + G D+ V I Y
Sbjct: 305 SLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMY 364
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM--YNGFRLDV 244
AKC L A+ VF + + + SWN+M++ K ++L+ ++ M G R +
Sbjct: 365 AKCGSLASAQRVFKEMPQ--KNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPND 422
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T V LLS+ VH+ ++ G+ L +++TL + K
Sbjct: 423 ITFVGLLSA-----------CVHAGLVNEGYRL-FDMMSTLFGLVPKIEH---------- 460
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
++ M+ A+ G L EA L +E E PD VT+ +++ C +++G
Sbjct: 461 --------YSCMVDLLARAGHLYEAWDL---IEKMPEKPDKVTLGALLGACRSKKNVDIG 509
Query: 365 K 365
+
Sbjct: 510 E 510
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 285/549 (51%), Gaps = 14/549 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC AYK+FD M R+V SW+A++ G G L+ L LF M GI + T
Sbjct: 422 YCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTF 481
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+A L +H F + IG + V V N+ + Y+KC + AE VF I +
Sbjct: 482 STNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD 541
Query: 205 RLRTVVSWNSMVAG---CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
R +++SWN+M+AG YG K D+ + R D T+ SLL + +
Sbjct: 542 R--SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE-RPDEFTLTSLLKACSSTGMIY 598
Query: 262 QGRLVHSHGIHYGFDLDVS--VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
G+ +H + GF S + +L+ +Y KCG + SAR FD I ++T +SW+++I G
Sbjct: 599 AGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILG 658
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLK 377
YAQ+G+ EA+ LF ++ D + S+I L GK A GL+
Sbjct: 659 YAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE 718
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V+ N+++DMY KCG + +A + F + K V+SWT +I G +G +++ +F+++
Sbjct: 719 TSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 776
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++ P+ V +LAVL AC+H+G +++G + + GI P ++HY+C+ DLLGR
Sbjct: 777 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI--KPRVEHYACVVDLLGRA 834
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G+LKEA + +MPIK + GIW TLL C++H +IE+G+ V L +++ + A YV M+
Sbjct: 835 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 894
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N Y G W+ N R + +KK G S I + F + + H + + L
Sbjct: 895 NLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLK 954
Query: 618 CLALHSREE 626
REE
Sbjct: 955 EAERRLREE 963
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 216/459 (47%), Gaps = 30/459 (6%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
S+P R + W++ + V + +L LF +M + I PN TF KAC
Sbjct: 437 SMPER--------NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC 488
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
L+ L IHG +K F KC R++ A K+F + R + SWN
Sbjct: 489 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 548
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
AM+ GF G+ L F M+ I+ D T+ L +A + K +H F +
Sbjct: 549 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 608
Query: 169 HIGV--DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
G + ++ + + Y KC L A F I+E +T++SW+S++ G +F
Sbjct: 609 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE--KTMISWSSLILGYAQEGEFV 666
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+++ ++ + ++D + S++ F L QG+ + + + L+ SV+N+++
Sbjct: 667 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 726
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY KCG +D A F + + +SWT +I+GY + G +++R+F+ M PD V
Sbjct: 727 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 786
Query: 347 TVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
L+++S C SG ++ G + F + G+K V ++D+ + G + +A+ L
Sbjct: 787 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 846
Query: 406 LPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+P K V W T+++ C ++G+ ++ L+ +D +
Sbjct: 847 MPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK 885
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
L++ N LI MY KC + A +FD + +R VSW+A++SG+ GDL +L LF M
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G P+ T + + CG ALE G + G + V V N+L+DMYSKCG I
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL--RPNRVTFLAVLQ 454
+A ++F + ++ ++SW MIAG G +ALD F + E ++ RP+ T ++L+
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589
Query: 455 ACTHTGFLEKGWAI 468
AC+ TG + G I
Sbjct: 590 ACSSTGMIYAGKQI 603
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
N++ N LIDMY KC A ++F ++PE+ VVSW+ +++G LNG+ +L LF ++
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ PN TF L+AC LEKG I I + ++ + + D+ + G
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK---IGFEMMVEVGNSLVDMYSKCG 527
Query: 499 KLKEA 503
++ EA
Sbjct: 528 RINEA 532
>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
Length = 495
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 264/481 (54%), Gaps = 4/481 (0%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI 137
G+ + + + KC ++ A + F+ M R+V SW+ M+ +AQ G + L LF M G+
Sbjct: 13 GNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGV 72
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ + VT + + A +A+ + + +H +D + V + Y KC L A
Sbjct: 73 EPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEARQ 132
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF GI E+ VV+W++M++ +++ + +M +G R + ++S+L +
Sbjct: 133 VFDGIVEK--DVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSA 190
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
AL +G++ H + GF DVS NTLI MY KCGD+ SA+ +F G+ R +SW+AM+
Sbjct: 191 GALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAML 250
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+ A+ G +A F M+ G PD VT +S++ C GAL G + G +
Sbjct: 251 AVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQ 310
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ + N+LIDMY KCGS+ AR +F + + V++WTTMI C + + EAL+LF ++
Sbjct: 311 SVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM 370
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++P++V FL+++ +C+H+G +E+G + +D+ S+ P ++H+ M DLLGR
Sbjct: 371 EKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQ--SFTPGVEHFVGMLDLLGRS 428
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
GKL EA + ++ MP++ W TLL ACK H + E VA + L P A PYV +
Sbjct: 429 GKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYVSFS 488
Query: 558 N 558
N
Sbjct: 489 N 489
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 219/420 (52%), Gaps = 26/420 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W++ + + + + L+LF++M++ +EPN +TF + ACA + +MIH
Sbjct: 44 WSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLAA 103
Query: 78 ------GHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G IV + V KC RL A ++FD + +DV +W+ M+ +AQ+G + ++
Sbjct: 104 RKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQ 163
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M L G++ + + +M + A A L+ K H + G ADVS NT I Y
Sbjct: 164 LFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYG 223
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A+ VF G+E R ++SW++M+A D+ +R M G + D T
Sbjct: 224 KCGDLASAKAVFGGMER--RDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTF 281
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VSLL + ALV+G ++H+ GF + + N+LI MY KCG + +AR +FD +
Sbjct: 282 VSLLDACSLLGALVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSH 341
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R ++WT MI+ Q EAL LF ME AG PD V LS+I C SG +E G+ +
Sbjct: 342 RNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIY 401
Query: 368 -----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
++ + + G++ V ++D+ + G + +A EL +P E VV W T+++ C
Sbjct: 402 FLKMVEDQSFTPGVEHFV----GMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSAC 457
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 4/144 (2%)
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N+L++MY KCG + +ARE F ++ + V+SW+TM+A A G+ +AL LF ++ E
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+ PN VTFL+VL AC + +E+G I + K + L + + + G+ +L
Sbjct: 72 VEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKK---LDVGLIVGTALVGMYGKCSRLI 128
Query: 502 EALDFVQSMPIKSDAGIWGTLLCA 525
EA + ++ D W T++ A
Sbjct: 129 EARQVFDGI-VEKDVVTWSTMISA 151
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 185/632 (29%), Positives = 307/632 (48%), Gaps = 21/632 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTF--PFIAKACAKLSDLIYSQMI 76
I W + ++ V + + L+LF M+ + + + T+ KAC + S++ Y + +
Sbjct: 59 IKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESL 118
Query: 77 HGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H + K+ +++ ++D + ++F EM R+ +W A + G G
Sbjct: 119 HAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLH 178
Query: 123 ENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
LR F M R + +D +A + + + +H+ I G A + V N+
Sbjct: 179 YEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANS 238
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y +C +++ +F + ER VV W S++ + + ++N + M +
Sbjct: 239 LATMYTECGEMQDGLRLFESMSER--DVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVS 296
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+ T S ++ LV G +H + G +SV N+++ MYS C +DSA VL
Sbjct: 297 PNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVL 356
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F G+ R +SW+ +I GY+Q +E + F M AG P + S++S G L
Sbjct: 357 FQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVL 416
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E G+ A GL+ N + +ALI+MYSKCGSI +A ++F +VS T MI G
Sbjct: 417 EQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGY 476
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A +G+ EA+DLF + ++L RP+ VTF++VL AC+H+G L+ G+ + ++ +
Sbjct: 477 AEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNM--R 534
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P +HY CM DLL R G+L +A + MP K D +W TLL ACK ++E G A
Sbjct: 535 PAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQR 594
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ +L+P S V +AN ++ G W AN+R MK V K PG S I + F +
Sbjct: 595 ILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKEPGWSSILIKDQVSAFAS 654
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
H +SE +L+ + + S Y +K
Sbjct: 655 GSLSHPQSEDVCSILELVVIDSEAHRYDCAIK 686
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 197/442 (44%), Gaps = 8/442 (1%)
Query: 65 AKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
A + ++S + H + +L A ++FD+M RD+ SW A++ G+ E
Sbjct: 18 ASIEKSMHSNHVDTHSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEE 77
Query: 125 VLRLFYNMRL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L LF MR+ +G+ D + +A + +++ +S+H++ + + V V +
Sbjct: 78 ALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSAL 137
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM-MYNGFR 241
+ Y + + + VF E R V+W + + G + + L ++ M +
Sbjct: 138 LDMYMRIGKIDKSCRVFA--EMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLS 195
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D L + + GR +H+H I GF + V N+L +MY++CG++ L
Sbjct: 196 SDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRL 255
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + +R V WT++I+ Y + G ++A+ F M + P+ T S + C L
Sbjct: 256 FESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRL 315
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ S GL D++ V N+++ MYS C + A LF + + ++SW+T+I G
Sbjct: 316 VWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGY 375
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+ E F + + +P ++L LE+G + + G+ N
Sbjct: 376 SQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALAL-YLGLEQN 434
Query: 482 PELDHYSCMADLLGRKGKLKEA 503
P + S + ++ + G + EA
Sbjct: 435 PTI--RSALINMYSKCGSIIEA 454
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 188/604 (31%), Positives = 304/604 (50%), Gaps = 28/604 (4%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV---------KCDRLDCAYKIFD--EM 101
N+L I K + I++Q+I + PF+ KC L+ A +F
Sbjct: 146 NHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHH 205
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLS 158
+ + +W +++ + L LF MR G Q F +++ + A + H
Sbjct: 206 HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265
Query: 159 LLKSVHSFGIHI-GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
L S+ IH G DA++ V + YAKC D+ A VF + ER +VSWNSM+
Sbjct: 266 QLHSL----IHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPER--NLVSWNSMIV 319
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G + + +D ++ ++ ++ + + +V S+LS+ L GR VH + YG
Sbjct: 320 GFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLV 379
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
V+N+L+ MY KC D LF + DR V+W ++ G+ Q +EA F+ M
Sbjct: 380 PLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVM 439
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
G LPD + +++ AL G + G N+ + +LI MY+KCGS+
Sbjct: 440 RREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSL 499
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA ++F + + V+SWT MI+ L+G + ++LF ++ + P+ VTF+ VL AC
Sbjct: 500 VDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSAC 559
Query: 457 THTGFLEKGWA--ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
+HTG +E+G A S+ + D NP +HY+CM DLLGR G L EA F++SMP+K
Sbjct: 560 SHTGRVEEGLAHFNSMKKIHD----MNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKP 615
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
+WG LL AC+ + N+++G A LF++EP++ YV +AN GR + +R
Sbjct: 616 TPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRR 675
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
+M N V+K PG S + T FTA DR H+ S+ Y +L+ L +++ Y + ++
Sbjct: 676 LMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEF 735
Query: 635 IPEH 638
+ H
Sbjct: 736 VTNH 739
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 216/466 (46%), Gaps = 22/466 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI W S I + N + L LF QM+ + PN TF I A A +++ Q +H
Sbjct: 209 TIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLH 268
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I K F KC + A ++FD+M R++ SWN+M+VGF +
Sbjct: 269 SLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYD 328
Query: 124 NVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ +F + +R + + V+V + A + L+ + VH + G+ V N+
Sbjct: 329 RAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSL 388
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y KC +F + + R VV+WN +V G DKF+++ N++ M G
Sbjct: 389 MDMYFKCRFFDEGVKLFQCVGD--RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILP 446
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + ++L S AL QG +H I G+ ++ ++ +LI+MY+KCG + A +F
Sbjct: 447 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVF 506
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+GI D +SWTAMIS Y G ++ + LF M + G P VT + ++S C +G +E
Sbjct: 507 EGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 566
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAG 420
G F++ + ++D+ + G + +A+ ++P K S W ++
Sbjct: 567 EGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGA 626
Query: 421 CALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKG 465
C G + +L E++ P LA + CT +G LE+
Sbjct: 627 CRKYGNLKMGREAAERLFEMEPYNPGNYVLLANM--CTRSGRLEEA 670
>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 285/542 (52%), Gaps = 10/542 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KCD + A +FD+M RD+ SWN M+ G+A +G + +L+L Y MR G++ D T
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ L + + +H + G D D+ + I+ Y KC + + V I
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ VV W M++G + + +L + M+ +G L + S+++S + G
Sbjct: 309 K--DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGA 366
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH + + +G+ LD +N+LI+MY+KCG +D + V+F+ + +R VSW A+ISGYAQ
Sbjct: 367 SVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNV 426
Query: 325 DLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
DL +AL LF M+ + D TV+S++ C +GAL +GK ++ +V
Sbjct: 427 DLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVD 486
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
AL+DMYSKCG + A+ F ++ K VVSW +IAG +G+ AL+++ + + +
Sbjct: 487 TALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGME 546
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
PN V FLAVL +C+H G +++G I D G+ P +H +C+ DLL R ++++A
Sbjct: 547 PNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV--EPNHEHLACVVDLLCRAKRIEDA 604
Query: 504 LDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALG 563
F + + + G +L AC+ + E+ + + + +L+P A YV++ + +A
Sbjct: 605 FKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Query: 564 GRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHS 623
RWD V+ M+ +KK PG S +NGKT TF H++ ++ L L S
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTVSL-----LKLLS 719
Query: 624 RE 625
RE
Sbjct: 720 RE 721
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 155/535 (28%), Positives = 255/535 (47%), Gaps = 27/535 (5%)
Query: 13 IYRSSTINQ---WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
I SS +N +NS I + + + L F M N + P+ TFP + KACA L
Sbjct: 2 IRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR 61
Query: 70 LIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + IH ++ + F K L A K+F+EM RDV W AM+
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGC 121
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+++ G + L MR GI+ VT++ + + ++ L+ +H F + G D D
Sbjct: 122 YSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE---ITQLQCLHDFAVIYGFDCD 178
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
++V N+ ++ Y KCD + A+ +F +E+R +VSWN+M++G + L M
Sbjct: 179 IAVMNSMLNLYCKCDHVGDAKDLFDQMEQR--DMVSWNTMISGYASVGNMSEILKLLYRM 236
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+G R D T + LS L GR++H + GFD+D+ + LI+MY KCG
Sbjct: 237 RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKE 296
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+++ + + I ++ V WT MISG + G ++AL +F M +G + S+++ C
Sbjct: 297 EASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
Q G+ +LG Y G + N+LI MY+KCG + + +F + E+ +VSW
Sbjct: 357 AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWN 416
Query: 416 TMIAGCALNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+I+G A N + +AL LF ++ + + + T +++LQAC+ G L G I I
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIR 476
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
P + + D+ + G L+ A S+ K D WG L+ H
Sbjct: 477 S---FIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFH 527
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/614 (29%), Positives = 292/614 (47%), Gaps = 22/614 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + L LF +M + + P+ AC+ L L + HG+
Sbjct: 183 WTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAY 242
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC RL A K+FD M R++ SW M+ G+ Q +
Sbjct: 243 RIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMA 302
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F+ + G Q D + + + + VH+ I +++D V N+ I YA
Sbjct: 303 MFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYA 362
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC+ L A VF + E +S+N+M+ G + +++ + M Y + T
Sbjct: 363 KCEHLTEARAVFEALAED--DAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTF 420
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
VSLL A+ + +H + G LD+ ++LI +YSK ++ A+ +F+ + +
Sbjct: 421 VSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHN 480
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R V W AMI G AQ +EA++LF ++ +G P+ T +++++ ++ G+ F
Sbjct: 481 RDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQF 540
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G + V NALIDMY+KCG I + R LF + K V+ W +MI+ A +G+
Sbjct: 541 HAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQA 600
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPELD 485
EAL +F + + PN VTF+ VL AC H G +++G + +D Y P +
Sbjct: 601 EEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEG----LRHFDFMKTKYAIEPGTE 656
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+ + +L GR GKL A +F++ MPI+ A +W +LL AC + N+EIG Y
Sbjct: 657 HYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLA 716
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
+P + P V M+N YA G W +R M V K PG S + + TF A R
Sbjct: 717 DPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGRE 776
Query: 606 HAESELTYPVLDCL 619
H E+++ Y +LD L
Sbjct: 777 HPEADVIYSLLDEL 790
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 242/535 (45%), Gaps = 26/535 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFR--QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
W S I + LF Q PN +ACA+ + + Q +HG
Sbjct: 80 WGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGV 139
Query: 80 IVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
V+ + + K +D A +FD + V++ +W A++ G++Q+G
Sbjct: 140 AVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVA 199
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L LF M L G++ D + A L + H + I V+ D SV N I
Sbjct: 200 LELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDL 259
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC L +A +F +E R +VSW +M+AG +++ + + G++ DV
Sbjct: 260 YCKCSRLSLARKLFDCMENR--NLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVF 317
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
S+L+S A+ QGR VH+H I + D V N+LI MY+KC + AR +F+ +
Sbjct: 318 ACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEAL 377
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ +S+ AMI GY++ GDL A+ +F M P +T +S++ A+EL K
Sbjct: 378 AEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSK 437
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
G ++ ++LID+YSK + DA+ +F + + +V W MI G A N
Sbjct: 438 QIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNE 497
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
+ EA+ LF+QL L PN TF+A++ + + G Q+ + I + D
Sbjct: 498 QGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQ-----QFHAQIIKAGADSD 552
Query: 486 HY--SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
H+ + + D+ + G +KE +S + D W +++ H E YV
Sbjct: 553 HHVSNALIDMYAKCGFIKEGRLLFES-TLGKDVICWNSMISTYAQHGQAEEALYV 606
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 197/382 (51%), Gaps = 6/382 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQA--DF 141
+ K R+ A ++FD M +++ SW + + AQ G E+ + LF R G +A +F
Sbjct: 56 YSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEF 115
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
+ L +A ++ +S + VH + IG+D +V V I+ YAK + A LVF
Sbjct: 116 LLASAL-RACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDA 174
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ ++ V+W +++ G + + +L + M +G R D + S +S+ L
Sbjct: 175 LP--VKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLE 232
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
GR H + + D SVIN LI +Y KC + AR LFD + +R VSWT MI+GY
Sbjct: 233 GGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYM 292
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q EA+ +F+ + G PD+ S+++ CG A+ G+ +A L+ +
Sbjct: 293 QNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEY 352
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N+LIDMY+KC + +AR +F AL E +S+ MI G + G+ A+D+F ++
Sbjct: 353 VKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCS 412
Query: 442 LRPNRVTFLAVLQACTHTGFLE 463
L+P+ +TF+++L + +E
Sbjct: 413 LKPSPLTFVSLLGVSSSQSAIE 434
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 111/203 (54%), Gaps = 2/203 (0%)
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
L H+ + G D+ + N L+ YSK G + AR LFD + + VSW + IS +AQ G
Sbjct: 32 LAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHG 91
Query: 325 DLDEALRLFFAMEAA--GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
++A+ LF A + A GE P+ + S + C QS A+ G+ A GL NV V
Sbjct: 92 CEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYV 151
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
ALI++Y+K G I A +F ALP K V+WT +I G + G+ AL+LF ++ +
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGV 211
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
RP+R + + AC+ GFLE G
Sbjct: 212 RPDRFVLASAVSACSALGFLEGG 234
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 302/615 (49%), Gaps = 47/615 (7%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYSQMIH 77
I W + I V + + L LF + + + P+ KAC + S++ Y + +H
Sbjct: 51 IVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACGQSSNIGYGESLH 110
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ K+ +++ ++D +IF EM R+ +W A++ G + G +
Sbjct: 111 AYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHK 170
Query: 124 NVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L F M R G+ DF L +A + + K +H+ I G DA + V N+
Sbjct: 171 EGLTYFSEMSRSKGLSDDFAFATAL-KACARLRQVKYGKEIHTHVIVRGSDASLCVVNSL 229
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
I+ Y +C ++ +F + ER V SW +++ + + + ++ + ++
Sbjct: 230 INMYTECGEMHDGVHLFESMSER--DVFSWTTLIDAYSQMGQEEKAVATF-------LKI 280
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
++ S + F ++L SV N+++ MYS CG +DSA VLF
Sbjct: 281 EIFRRTSQWTYFCLGDSL-------------------SVSNSMMKMYSTCGKLDSASVLF 321
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
G+ R ++W+ +I GY+Q G +E F M AG P + S++S G LE
Sbjct: 322 QGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLE 381
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ A GL+ N + +ALI+MYSKCGSI +A ++F +VS T MI G A
Sbjct: 382 QGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIVSLTAMINGYA 441
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+G EA+DLF + +++ LRP+ VTF++VL AC+H+G L+ G+ + D+ I P
Sbjct: 442 EHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLMQDEYNI--RP 499
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+HY CM DLL R G+L +A + MP K D +W TLL ACK + E G A +
Sbjct: 500 VKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGDTERGRRAAERI 559
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
+L+P S +V +AN Y+ G+ + A++R MK V K PG S I + TF +
Sbjct: 560 LELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVPGWSSIKIMDRASTFVSG 619
Query: 603 DRYHAESELTYPVLD 617
+ H++SE Y +LD
Sbjct: 620 SQSHSQSEDIYSILD 634
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 173/390 (44%), Gaps = 32/390 (8%)
Query: 80 IVKSPFVKCDRLD---CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
+++ P K R+ A +FD+M RD+ SW A++ G+ L LF +
Sbjct: 22 LLEKPVEKIVRISNQGAARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDP 81
Query: 137 IQADFVTVMGLT-QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
+ +V+ + +A + ++ +S+H++ + V V ++ Y + +
Sbjct: 82 AVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKG 141
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
+F E + R V+W ++V+G + + L ++ M + D + L +
Sbjct: 142 CRIFT--EMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACA 199
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTA 315
+ G+ +H+H I G D + V+N+LI+MY++CG++ LF+ + +R SWT
Sbjct: 200 RLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTT 259
Query: 316 MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+I Y+Q G ++A+ F +E + S +W Y C G
Sbjct: 260 LIDAYSQMGQEEKAVATFLKIE----------IFRRTS-----------QW--TYFCLG- 295
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
D++ V N+++ MYS CG + A LF + + +++W+T+I G + G E F
Sbjct: 296 --DSLSVSNSMMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFS 353
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + +P ++L LE+G
Sbjct: 354 WMRQAGPKPTDPALASLLSVSGTMAVLEQG 383
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 29/321 (9%)
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+S++ + + + +AR LFD + R VSWTA+I+GY + EAL LF A+
Sbjct: 20 ISLLEKPVEKIVRISNQGAARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLF 79
Query: 339 AGELPDLVTVLSM-ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+ +VLS+ + CGQS + G+ YA L +V V L++MY + G I
Sbjct: 80 DPAVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKID 139
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+F + + V+WT +++G G E L F ++ + F L+AC
Sbjct: 140 KGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACA 199
Query: 458 HTGFLEKGWAIS---IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
++ G I I++ D + + + ++ G++ + + +SM +
Sbjct: 200 RLRQVKYGKEIHTHVIVRGSDASLCV------VNSLINMYTECGEMHDGVHLFESMS-ER 252
Query: 515 DAGIWGTLL----------CACKIHLNIEI----GEYVAYCLFKLEPHSAAPYVEMANKY 560
D W TL+ A L IEI ++ +CL S + M Y
Sbjct: 253 DVFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCL----GDSLSVSNSMMKMY 308
Query: 561 ALGGRWDGVANIRTMMKRNQV 581
+ G+ D + + M+R +
Sbjct: 309 STCGKLDSASVLFQGMRRRDI 329
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/586 (30%), Positives = 295/586 (50%), Gaps = 19/586 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL----------IY 72
N+ + + + + L + M + +E ++ T F KAC L D +
Sbjct: 124 NAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVC 183
Query: 73 SQMIHGHIVKSP----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ G + S VK + CA F +M +DV WN M+ GF Q G L
Sbjct: 184 KGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNL 243
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F +M I+ VT++ L Q+ ++L+ K +H F + G+ D V T I Y K
Sbjct: 244 FLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCK 303
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
D++ A +F + R +VSWN M++G ++L ++ ++ + D TVV
Sbjct: 304 SGDVESARWIFENMPSR--NLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVV 361
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
SL+ L G+++H G DL++ + ++ +Y+KCG + A +F+ + ++
Sbjct: 362 SLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNK 421
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
+SWTAM+ G AQ G +AL+LF M+ + +T++S++ C G L G+
Sbjct: 422 NVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVH 481
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF-YALPEKIVVSWTTMIAGCALNGEF 427
V+V ALIDMY+KC I A +F Y L K V+ + +MI+G ++G
Sbjct: 482 ATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLG 541
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+AL ++H++ L+PN TF+++L AC+H+G +E+G I++ Q K + P Y
Sbjct: 542 HKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEG--IALFQNMVKDHNTTPTDKLY 599
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R G+L++A + + MP +GI TLL C +H +IE+G +A L LE
Sbjct: 600 ACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLES 659
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+ + Y+ ++N YA RWD V +R +M ++KK PG S +N
Sbjct: 660 RNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEVN 705
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 188/380 (49%), Gaps = 6/380 (1%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L+ A K+FDE+ NAM+ G+ Q + + L M ++ D T +A
Sbjct: 105 LENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKA 164
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ + V + G+ + ++ ++ K D+ A+ F + E+ VV
Sbjct: 165 CMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEK--DVV 222
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
WN M+ G F + N + M+YN T++SL+ S L G+ +H
Sbjct: 223 CWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFV 282
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ +G D V+ TLI MY K GD++SAR +F+ + R VSW MISGY Q G L E L
Sbjct: 283 LGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETL 342
Query: 331 RLF--FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
RLF M+ G D TV+S+I C ++ L+ GK + GL N+++ A++D
Sbjct: 343 RLFQKLIMDDVG--FDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVD 400
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
+Y+KCGS+ A +F + K V+SWT M+ G A NG +AL LF Q+ + N +T
Sbjct: 401 LYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALT 460
Query: 449 FLAVLQACTHTGFLEKGWAI 468
++++ CT G L +G ++
Sbjct: 461 LVSLVYCCTLLGLLREGRSV 480
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 202/441 (45%), Gaps = 23/441 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I + + + LF M N IEP+ +T + ++C ++ +L + + +HG ++
Sbjct: 224 WNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVL 283
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ K ++ A IF+ M R++ SWN M+ G+ Q G L LR
Sbjct: 284 GFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLR 343
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF + + + D TV+ L Q L K +H F G+D ++ + + YA
Sbjct: 344 LFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYA 403
Query: 188 KCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
KC L A VF ER+ + V+SW +M+ G D+L + M +
Sbjct: 404 KCGSLAYASSVF----ERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNAL 459
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD-G 304
T+VSL+ L +GR VH+ + F +V V+ LI MY+KC I+SA ++F G
Sbjct: 460 TLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYG 519
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + + + +MISGY G +AL ++ M G P+ T +S++S C SG +E G
Sbjct: 520 LTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEG 579
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCA 422
F N + ++D+ S+ G + A EL +P T++ GC
Sbjct: 580 IALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCL 639
Query: 423 LNGEFVEALDLFHQLMELDLR 443
L+ + + L +L+ L+ R
Sbjct: 640 LHKDIELGVKLADRLLSLESR 660
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 17/253 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + WN I V +TL LF+++ +D+ ++ T + + C++ +DL ++
Sbjct: 319 SRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKI 378
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+HG I + + KC L A +F+ M ++V SW AMLVG AQ G
Sbjct: 379 LHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGH 438
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ L+LF M+ + + +T++ L L +SVH+ ++V V
Sbjct: 439 ARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTA 498
Query: 182 WISSYAKCDDLKMAELVF-CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I YAKC + AE+VF G+ + V+ +NSM++G +L Y M G
Sbjct: 499 LIDMYAKCSKINSAEMVFKYGLTP--KDVILYNSMISGYGMHGLGHKALCVYHRMNREGL 556
Query: 241 RLDVTTVVSLLSS 253
+ + +T VSLLS+
Sbjct: 557 QPNESTFVSLLSA 569
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%)
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D ++ L++ YS G +++AR +FD I V AM++GY Q ++ + L M
Sbjct: 88 DQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMS 147
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
D T + C E+G A GL + +++++ K G I
Sbjct: 148 RCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIM 207
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
A+ F+ + EK VV W MI G G F E +LF ++ + P+ VT ++++Q+C
Sbjct: 208 CAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSC 266
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
++ + W + + A L LF QM+ + N LT + C L L +
Sbjct: 419 KNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGR 478
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFD-EMAVRDVASWNAMLVGFAQM 119
+H + + F KC +++ A +F + +DV +N+M+ G+
Sbjct: 479 SVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMH 538
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G L +++ M G+Q + T + L A H+
Sbjct: 539 GLGHKALCVYHRMNREGLQPNESTFVSLLSACSHS 573
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 279/547 (51%), Gaps = 43/547 (7%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
LD A IF ++ +NA++ G A+ E + F M + I+ D +T+ + ++
Sbjct: 88 LDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKS 147
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR--T 208
+ L + +H + +G++ D V + + Y K +L +F +R + +
Sbjct: 148 VAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAES 207
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
++ WN ++ GC + + + M PE
Sbjct: 208 ILLWNVLINGCCKVGDLSKAASLFEAM---------------------PER--------- 237
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ N+LI+ + + GD+D AR LF + ++ VSWT MI+G++Q GD ++
Sbjct: 238 ---------NAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEK 288
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
AL +F+ M G P+ +TV+S + C + GAL++G+ NY S G + N + AL+D
Sbjct: 289 ALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVD 348
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY+KCG+I A +F K +++W+ MI G A++G F +AL F ++ + P+ V
Sbjct: 349 MYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVI 408
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
FLA+L AC+H+G +++G ++ + S P + HY+ + DLLGR G+L EAL F+Q
Sbjct: 409 FLAILTACSHSGNVDQG--LNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQ 466
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
SMPI D IWG L CAC+ H NIE+ E A L +LEP YV ++N YA GRW+
Sbjct: 467 SMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWED 526
Query: 569 VANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
V +RT+MK V+K PG S + G+ +F A D H +E L+ + +++E Y
Sbjct: 527 VERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGY 586
Query: 629 SSHLKWI 635
W+
Sbjct: 587 MPETAWV 593
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 200/465 (43%), Gaps = 62/465 (13%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R + + +N+ IR + ++ F M + I P+ LT PF+ K+ A L D+
Sbjct: 96 RCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVG 155
Query: 72 YSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVAS----WNAML 113
+ +HG ++K +VK L ++FDE R+ A WN ++
Sbjct: 156 LGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLI 215
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G ++G L LF M +
Sbjct: 216 NGCCKVGDLSKAASLFEAMP---------------------------------------E 236
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ N+ I+ + + DL A +F + E+ VVSW +M+ G + + +L+ +
Sbjct: 237 RNAGSWNSLINGFVRNGDLDRARELFVQMPEK--NVVSWTTMINGFSQNGDHEKALSMFW 294
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M+ G R + TVVS L + AL G +H++ GF L+ + L+ MY+KCG
Sbjct: 295 RMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCG 354
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
+I SA +F + ++W+ MI G+A G D+AL+ F M++AG PD V L++++
Sbjct: 355 NIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILT 414
Query: 354 GCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIV 411
C SG ++ G +F++ ++ + ++D+ + G + +A ++P
Sbjct: 415 ACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDF 474
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLR-PNRVTFLAVLQA 455
V W + C + A +L++L+ + P FL+ + A
Sbjct: 475 VIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYA 519
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 263/497 (52%), Gaps = 49/497 (9%)
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
++L +V S G H ADV V N + A C + A +F G +R +VSWN+++
Sbjct: 141 AVLGNVLSLGFH----ADVFVVNAAMHFLAVCSSMAEARKLFDG--SHVRDLVSWNTLIG 194
Query: 218 GCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G ++L + M+ +G D T++ ++S L GR +H + +G
Sbjct: 195 GYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVR 254
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD--------- 327
V ++N ++ MY KCGD++ A+ +F+GI +T VSWT MI GYAQ G +D
Sbjct: 255 CTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEM 314
Query: 328 ----------------------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
EALRLF M+ A PD +T+++++S C Q GALE+G
Sbjct: 315 PERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGM 374
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
W +Y + +VM+ L+DMYSKCG+I A +F +PEK ++WT MI+G A +G
Sbjct: 375 WVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHG 434
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---WAISIIQYDDKGISYNP 482
A+ F +++EL L+P+ +TF+ VL AC H G +++G +++ + +Y
Sbjct: 435 HADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKY-----HLER 489
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
++ HYSCM DLLGR G L EA V +MP++ DA +WG L AC++H NI +GE A L
Sbjct: 490 KMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKL 549
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
+L+P + YV +AN YA +R MM+ V+K PG S +NG F +
Sbjct: 550 VELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVK 609
Query: 603 DRYHAESELTYPVLDCL 619
D+ H + Y DCL
Sbjct: 610 DKSHTDIAAIY---DCL 623
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 208/441 (47%), Gaps = 54/441 (12%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYK 96
P++LTFPF+ KACA+L + Y + G+++ F C + A K
Sbjct: 117 RPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARK 176
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG---IQADFVTVMGLTQAAIH 153
+FD VRD+ SWN ++ G+ + G L +F+ R+VG + D VT++G+ +
Sbjct: 177 LFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFW--RMVGDGAVTPDEVTMIGVVSGSAQ 234
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ L L + +H + GV V + N + Y KC DL+ A+ VF GI++ +T+VSW
Sbjct: 235 LRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDK--KTIVSWT 292
Query: 214 SMVAGCTYGDKFDDSLNFYRHM----------MYNGF----------RL----------- 242
+M+ G DD+ + M + G+ RL
Sbjct: 293 TMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEP 352
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D T+V+LLS+ AL G VH + L V + L+ MYSKCG+I+ A +F
Sbjct: 353 DDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVF 412
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
I ++ ++WTAMISG A G D A++ F M G PD +T + ++S C +G ++
Sbjct: 413 KEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVK 472
Query: 363 LGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAG 420
G+ F + S L+ + + ++D+ + G + +A L +P E V W +
Sbjct: 473 EGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFA 532
Query: 421 CALNGEFVEALDLFHQLMELD 441
C ++G +L+ELD
Sbjct: 533 CRMHGNITLGEKAAMKLVELD 553
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 147/306 (48%), Gaps = 38/306 (12%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G V + + GF DV V+N + + C + AR LFDG R VSW +I GY +
Sbjct: 139 GNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVR 198
Query: 323 KGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+G EAL +F+ M G + PD VT++ ++SG Q LELG+ Y S G++ V
Sbjct: 199 RGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVR 258
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG---------------- 425
+ N ++DMY KCG + A+ +F + +K +VSWTTMI G A G
Sbjct: 259 LMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERD 318
Query: 426 ---------------EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAIS 469
EAL LFH + E + P+ +T + +L AC+ G LE G W
Sbjct: 319 VFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHH 378
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
I D + +S + L + + D+ + G +++A+ + +P K +A W ++ H
Sbjct: 379 YI--DRRRVSLSVMLG--TNLVDMYSKCGNIEKAIRVFKEIPEK-NALTWTAMISGLANH 433
Query: 530 LNIEIG 535
+ ++
Sbjct: 434 GHADVA 439
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + V + L LF M++ +EP+++T + AC++L L +H +I
Sbjct: 322 WNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYID 381
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC ++ A ++F E+ ++ +W AM+ G A G + ++
Sbjct: 382 RRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIK 441
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
F M +G+Q D +T +G+ A HA
Sbjct: 442 YFQRMIELGLQPDEITFIGVLSACCHA 468
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
PD +T ++ C + G S G +V V NA + + C S+ +AR+L
Sbjct: 118 PDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKL 177
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQACTHTGF 461
F + +VSW T+I G G EAL++F +++ + + P+ VT + V+
Sbjct: 178 FDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRD 237
Query: 462 LEKG 465
LE G
Sbjct: 238 LELG 241
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/629 (28%), Positives = 302/629 (48%), Gaps = 19/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I + + + L +F QM++ D+ P +T+ I ACA L IHG I+
Sbjct: 73 WTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQIL 132
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC + A+ F + RDV SW AM+ Q
Sbjct: 133 QQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARW 192
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ M+L G+ + +T+ + A +LS K V+ +++DV V N+ ++ +
Sbjct: 193 LYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFG 252
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
L A +F + +R VV+WN ++ + F +++ + + +G + + T
Sbjct: 253 NAGLLGDARRLFEDMVDR--DVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITF 310
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V +L+ + +L +G+++H G+D D V L+S+Y +C A +F +
Sbjct: 311 VLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGS 370
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
+ ++WT M YAQ G EAL+LF M+ G P T+++++ C AL+ G+
Sbjct: 371 KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 430
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
++ + ++V ALI+MY KCG + +A +F + ++ ++ W +M+ A +G +
Sbjct: 431 HSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYY 490
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E L LF+Q+ ++ + V+F++VL A +H+G + G+ + D I+ PEL Y
Sbjct: 491 DETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPEL--Y 548
Query: 488 SCMADLLGRKGKLKEALDFVQSMP-IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
C+ DLLGR G+++EA+D V + D +W TLL AC+ H + + A + + +
Sbjct: 549 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD 608
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + YV ++N YA G WDGV +R +M+ VKK PG+S I + F DR H
Sbjct: 609 PSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSH 668
Query: 607 AESELTYPVLDCLALHSREEAYSSHLKWI 635
Y LD L R Y K I
Sbjct: 669 PRRHPIYAELDVLNSEMRAAGYIPDTKMI 697
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 235/496 (47%), Gaps = 26/496 (5%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYK 96
+P+ F + + C+ ++ + + +H H+ F +C + A +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+F+ + +DV +W M+ + Q G + L +FY M+ + VT + + A +
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L +H + G + DV V I+ Y KC ++ A F +E R VVSW +M+
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH--RDVVSWTAMI 178
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH---SHGIHY 273
A C D+F + YR M +G + T+ ++ +++ P L +G+ V+ S G+
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV-- 236
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
+ DV V+N+ ++M+ G + AR LF+ + DR V+W +I+ Y Q + EA+RLF
Sbjct: 237 -MESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLF 295
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
++ G + +T + M++ +L GK G + +V AL+ +Y +C
Sbjct: 296 GRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRC 355
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
+ G A ++F + K V++WT M A NG EAL LF ++ RP T +AVL
Sbjct: 356 EAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVL 415
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
C H L+KG I +++ + E+ + + ++ G+ GK+ EA+ + M K
Sbjct: 416 DTCAHLAALQKGRQIHSHIIENR---FRMEMVVETALINMYGKCGKMAEAMSVFEKMA-K 471
Query: 514 SDAGIWGTLLCACKIH 529
D +W ++L A H
Sbjct: 472 RDILVWNSMLGAYAQH 487
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 285/549 (51%), Gaps = 14/549 (2%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC AYK+FD M R+V SW+A++ G G L+ L LF M GI + T
Sbjct: 51 YCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTF 110
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+A L +H F + IG + V V N+ + Y+KC + AE VF I +
Sbjct: 111 STNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD 170
Query: 205 RLRTVVSWNSMVAG---CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
R +++SWN+M+AG YG K D+ + R D T+ SLL + +
Sbjct: 171 R--SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE-RPDEFTLTSLLKACSSTGMIY 227
Query: 262 QGRLVHSHGIHYGFDLDVS--VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
G+ +H + GF S + +L+ +Y KCG + SAR FD I ++T +SW+++I G
Sbjct: 228 AGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILG 287
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS--GGLK 377
YAQ+G+ EA+ LF ++ D + S+I L GK A GL+
Sbjct: 288 YAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE 347
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+V+ N+++DMY KCG + +A + F + K V+SWT +I G +G +++ +F+++
Sbjct: 348 TSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++ P+ V +LAVL AC+H+G +++G + + GI P ++HY+C+ DLLGR
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI--KPRVEHYACVVDLLGRA 463
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G+LKEA + +MPIK + GIW TLL C++H +IE+G+ V L +++ + A YV M+
Sbjct: 464 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N Y G W+ N R + +KK G S I + F + + H + + L
Sbjct: 524 NLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLK 583
Query: 618 CLALHSREE 626
REE
Sbjct: 584 EAERRLREE 592
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 216/459 (47%), Gaps = 30/459 (6%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
S+P R + W++ + V + +L LF +M + I PN TF KAC
Sbjct: 66 SMPER--------NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC 117
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
L+ L IHG +K F KC R++ A K+F + R + SWN
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
AM+ GF G+ L F M+ I+ D T+ L +A + K +H F +
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 169 HIGV--DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
G + ++ + + Y KC L A F I+E +T++SW+S++ G +F
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE--KTMISWSSLILGYAQEGEFV 295
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+++ ++ + ++D + S++ F L QG+ + + + L+ SV+N+++
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 355
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY KCG +D A F + + +SWT +I+GY + G +++R+F+ M PD V
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 347 TVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
L+++S C SG ++ G + F + G+K V ++D+ + G + +A+ L
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 475
Query: 406 LPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+P K V W T+++ C ++G+ ++ L+ +D +
Sbjct: 476 MPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK 514
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 6/307 (1%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
VH + + G ++ N I Y KC + MA VF + E R VVSW+++++G
Sbjct: 28 VHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE--RNVVSWSALMSGHVLN 85
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
SL+ + M G + T + L + AL +G +H + GF++ V V
Sbjct: 86 GDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVG 145
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-- 340
N+L+ MYSKCG I+ A +F I DR+ +SW AMI+G+ G +AL F M+ A
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGD 398
E PD T+ S++ C +G + GK + G + + +L+D+Y KCG +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
AR+ F + EK ++SW+++I G A GEFVEA+ LF +L EL+ + + +++
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 459 TGFLEKG 465
L +G
Sbjct: 326 FALLRQG 332
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 114/209 (54%), Gaps = 2/209 (0%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
QG VH + + G L++ N LI MY KC + A +FD + +R VSW+A++SG+
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
GDL +L LF M G P+ T + + CG ALE G + G + V
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V N+L+DMYSKCG I +A ++F + ++ ++SW MIAG G +ALD F + E +
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 442 L--RPNRVTFLAVLQACTHTGFLEKGWAI 468
+ RP+ T ++L+AC+ TG + G I
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQI 232
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%)
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
++S++ C + G + G Y G N++ N LIDMY KC A ++F ++
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
PE+ VVSW+ +++G LNG+ +L LF ++ + PN TF L+AC LEKG
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 467 AI 468
I
Sbjct: 128 QI 129
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 195/637 (30%), Positives = 303/637 (47%), Gaps = 25/637 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W + V + L L+ +M Q + PN TF + A + L L Y +++H
Sbjct: 182 IVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHA 240
Query: 79 H----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
H ++K+ V KC ++ A K+ DV W A++ GF Q
Sbjct: 241 HLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFRE 300
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ F+ M G+ + T G+ A L L K +HS + G++ DVSV N+ +
Sbjct: 301 AITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVD 360
Query: 185 SYAKCDDL-KMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y KC ++ + A F GI V+SW S++AG + ++S+ + M G R +
Sbjct: 361 MYMKCSNMIEDAVRAFRGIASP--NVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPN 418
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+ ++L + ++L Q R +H + I D DV V N L+ Y+ G +D A +
Sbjct: 419 SFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTS 478
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R +++T++ + Q G+ + AL + M D ++ S +S +E
Sbjct: 479 MMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMET 538
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK Y+ GL + V N L+D+Y KCG I DA F + E VSW +I G A
Sbjct: 539 GKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLAS 598
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
NG AL F + + P+++T L VL AC+H G ++ G + GI P+
Sbjct: 599 NGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGI--RPQ 656
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
LDHY C+ DLLGR G+L+EA++ +++MP K DA I+ TLL ACK+H NI +GE++A
Sbjct: 657 LDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGL 716
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+L+P A YV +AN Y GR + R MM+ V+K PGQS FTA D
Sbjct: 717 ELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGD 776
Query: 604 RYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHEA 640
H + + ++ L R + W E+ A
Sbjct: 777 TSHPQIGKIHEKIESLIAQFRNQGI-----WYQENRA 808
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 188/377 (49%), Gaps = 8/377 (2%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + KC + A ++FDEM RDVASW ++ + ++G E L LF +M + G +
Sbjct: 58 SLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEF 117
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ ++ + + + G D++ + + I Y+KC + A VF +
Sbjct: 118 TLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM 177
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL--SSFVCPEAL 260
+VSW MV+ + +L Y M+ G + T V LL SSF+ L
Sbjct: 178 NN--GDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFL---GL 232
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G+LVH+H + + +L++ + L+ MY KC I+ A + + WTA+ISG+
Sbjct: 233 NYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGF 292
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
Q EA+ F ME +G +P+ T +++ C AL+LGK + GL+++V
Sbjct: 293 TQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDV 352
Query: 381 MVCNALIDMYSKCGS-IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V N+L+DMY KC + I DA F + V+SWT++IAG + +G E++ +F +
Sbjct: 353 SVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQG 412
Query: 440 LDLRPNRVTFLAVLQAC 456
+ +RPN T +L AC
Sbjct: 413 VGVRPNSFTLSTILGAC 429
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 208/448 (46%), Gaps = 26/448 (5%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----------- 85
+ L LF M + PN T ++C+ L + + + KS F
Sbjct: 99 EALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALI 158
Query: 86 ---VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
KC AY++F+ M D+ SW M+ F + G L+L++ M G+ +
Sbjct: 159 DFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEF 218
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC----DDLKMAELV 198
T + L AA L+ K VH+ + ++ ++ + + Y KC D +K+++L
Sbjct: 219 TFVKLL-AASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLT 277
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
V W ++++G T KF +++ + M +G + T +L++
Sbjct: 278 L------EYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSIL 331
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD-IDSARVLFDGICDRTRVSWTAMI 317
AL G+ +HS + G + DVSV N+L+ MY KC + I+ A F GI +SWT++I
Sbjct: 332 ALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLI 391
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
+G+++ G +E++++F AM+ G P+ T+ +++ CG +L + Y
Sbjct: 392 AGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNAD 451
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
++V+V NAL+D Y+ G + DA + + + V+++T++ G AL++ +
Sbjct: 452 NDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHM 511
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ D+R + + + L A +E G
Sbjct: 512 NKDDVRMDGFSLASFLSAAAGIPIMETG 539
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 110/209 (52%)
Query: 253 SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
SF ++ G +HS I GF D+ + N L+S+Y KC + AR LFD + R S
Sbjct: 24 SFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVAS 83
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
WT ++S Y + G+ +EAL LF +M +GE P+ T+ + + C G F
Sbjct: 84 WTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVT 143
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
G N ++ +ALID YSKCG +A +F + +VSWT M++ G + +AL
Sbjct: 144 KSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQ 203
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGF 461
L+H++++ + PN TF+ +L A + G
Sbjct: 204 LYHRMIQTGVAPNEFTFVKLLAASSFLGL 232
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 3/306 (0%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+HS I +G D+ + N +S Y KC + A +F E R V SW +++
Sbjct: 37 IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLF--DEMPCRDVASWTMLMSAYGKI 94
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+++L + M+ +G + T+ + L S G + GFD + +
Sbjct: 95 GNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLG 154
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
+ LI YSKCG A +F+ + + VSWT M+S + + G +AL+L+ M G
Sbjct: 155 SALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVA 214
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ T + +++ G L GK + ++ N+++ AL+DMY KC SI DA ++
Sbjct: 215 PNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKV 273
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
E V WT +I+G + +F EA+ FH++ + PN T+ +L AC+ L
Sbjct: 274 SKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILAL 333
Query: 463 EKGWAI 468
+ G I
Sbjct: 334 DLGKQI 339
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 279/546 (51%), Gaps = 8/546 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC AYK+FD M R+V SW A++ G G L L LF M GI + T
Sbjct: 414 YCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTF 473
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+A L +H F + IG + V V N+ + Y+KC + AE VF +
Sbjct: 474 STNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVG 533
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF--RLDVTTVVSLLSSFVCPEALVQ 262
R +++SWN+M+AG + +L + M R D T+ SLL + +
Sbjct: 534 R--SLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYA 591
Query: 263 GRLVHSHGIHYGFDLDVS--VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G+ +H + GF S + +L+ +Y KCG++ SAR FD I ++T +SW+++I GY
Sbjct: 592 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGY 651
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
AQ+GD EA+ LF ++ D + S+I L+ GK
Sbjct: 652 AQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLET 711
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V N+L+DMY KCG + +A + F + K V+SWT MI G +G +A+ +F++++
Sbjct: 712 SVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRH 771
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
++ P+ V +LAVL AC+H+G +++G + + +GI P ++HY+C+ DLLGR G+L
Sbjct: 772 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGI--KPRVEHYACVVDLLGRAGRL 829
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
KEA V +MPIK + GIW TLL C++H +IE+G+ V L +++ + A YV M+N Y
Sbjct: 830 KEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLY 889
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
G W+ N R + ++K G S I + F + + H + + L +
Sbjct: 890 GQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETLKEVE 949
Query: 621 LHSREE 626
REE
Sbjct: 950 RRLREE 955
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 212/457 (46%), Gaps = 30/457 (6%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
S+P R + W + + V + + +L LF +M + I PN TF KAC
Sbjct: 429 SMPER--------NVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKAC 480
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
L+ L IHG +K F KC R++ A K+F M R + SWN
Sbjct: 481 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWN 540
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
AM+ G+ G+ L F M+ I+ D T+ L +A + K +H F +
Sbjct: 541 AMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 600
Query: 169 HIGV--DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
G + ++ + + Y KC +L A F I+E +T++SW+S++ G F
Sbjct: 601 RSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE--KTMISWSSLILGYAQEGDFV 658
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+++ ++ + ++D + S++ F L QG+ + + + L+ SV N+L+
Sbjct: 659 EAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLV 718
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY KCG +D A F + + +SWT MI+GY + G +A+ +F M PD V
Sbjct: 719 DMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEV 778
Query: 347 TVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
L+++S C SG ++ G + F + G+K V ++D+ + G + +A+ L
Sbjct: 779 CYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDT 838
Query: 406 LPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELD 441
+P K V W T+++ C ++G+ ++ L+ +D
Sbjct: 839 MPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 875
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G L++ N LI MY KC + A +FD + +R VSWTA++SG+ GDL+ +L LF
Sbjct: 399 GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M G P+ T + + CG ALE G + G + V V N+L+DMYSKC
Sbjct: 459 TEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 518
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL--RPNRVTFLA 451
G I +A ++F + + ++SW MIAG G AL F + E + RP+ T +
Sbjct: 519 GRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTS 578
Query: 452 VLQACTHTGFLEKGWAI 468
+L+AC+ TG + G I
Sbjct: 579 LLKACSSTGMIYAGKQI 595
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 369 NYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
N+ SG GL N++ N LIDMY KC A ++F ++PE+ VVSWT +++G LNG+
Sbjct: 394 NFRLSGSGL--NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDL 451
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
+L LF ++ + PN TF L+AC LEKG I I + ++
Sbjct: 452 NGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK---IGFEMMVEVG 508
Query: 488 SCMADLLGRKGKLKEA 503
+ + D+ + G++ EA
Sbjct: 509 NSLVDMYSKCGRINEA 524
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 287/535 (53%), Gaps = 14/535 (2%)
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C + + A ++F+++ +V N+++ AQ +F M+ G+ AD T L
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+A L ++K +H+ +G+ +D+ V N I Y++C L + + + + R
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV-CPEALVQGRLV 266
VSWNSM+ G + D+ + M + D+ + ++L + C E L
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELF 239
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG--ICDRTRVSWTAMISGYAQKG 324
+ + +T++ YSK GD++ ARV+FD + + V+WT +I+GYA+KG
Sbjct: 240 EKMP-----ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKG 294
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
L EA RL M A+G D V+S+++ C +SG L LG + L N V N
Sbjct: 295 LLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLN 354
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
AL+DMY+KCG++ A ++F +P+K +VSW TM+ G ++G EA++LF ++ +RP
Sbjct: 355 ALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRP 414
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
++VTF+AVL +C H G +++G I +K P+++HY C+ DLLGR G+LKEA+
Sbjct: 415 DKVTFIAVLCSCNHAGLIDEG--IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAI 472
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
VQ+MP++ + IWG LL AC++H ++I + V L KL+P Y ++N YA
Sbjct: 473 KVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE 532
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
W+GVA+IR+ MK V+K G S + FT D+ H +S+ Y +L L
Sbjct: 533 DWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 215/457 (47%), Gaps = 28/457 (6%)
Query: 4 SSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA 63
++L R+ + ++ NS IR ++ ++ +F +M++ + +N T+PF+ KA
Sbjct: 67 TNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA 126
Query: 64 CAKLSDLIYSQMIHGHIVK-----SPFVKCDRLDC-----------AYKIFDEMAVRDVA 107
C+ S L +M+H HI K +V +DC A K+F++M+ RD
Sbjct: 127 CSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV 186
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
SWN+ML G + G L + RLF M Q D ++ + + +S +F
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMS-----KAFE 237
Query: 168 IHIGVDADVSVC-NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ + +V +T + Y+K D++MA ++F + + VV+W ++AG
Sbjct: 238 LFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLK 297
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
++ M+ +G + D V+S+L++ L G +HS + V+N L+
Sbjct: 298 EADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALL 357
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY+KCG++ A +F+ I + VSW M+ G G EA+ LF M G PD V
Sbjct: 358 DMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKV 417
Query: 347 TVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T ++++ C +G ++ G +F + L V L+D+ + G + +A ++
Sbjct: 418 TFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQT 477
Query: 406 LP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+P E VV W ++ C ++ E A ++ L++LD
Sbjct: 478 MPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L Q + +H+ I D+ + LIS S C + A +F+ + + ++I
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRA 91
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+AQ +A +F M+ G D T ++ C L + K N+ GL +
Sbjct: 92 HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 380 VMVCNALIDMYSKCGSIG--DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ V NALID YS+CG +G DA +LF + E+ VSW +M+ G GE +A LF ++
Sbjct: 152 IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
Query: 438 MELDL 442
+ DL
Sbjct: 212 PQRDL 216
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/597 (29%), Positives = 298/597 (49%), Gaps = 19/597 (3%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ + E + K +L+F ++ ++ E + T P + K C +L Q +HG +
Sbjct: 229 SWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLV 288
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+K + KC + AY++F + DV + M+ F +
Sbjct: 289 IKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAF 348
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M +G++ + T +GL A ++L +S+H+ + G VC+ + Y
Sbjct: 349 DIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMY 408
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
K ++ A L F ++ + SWN++++G G+ + L ++ ++ G + T
Sbjct: 409 VKTGAVQDAILAFDLMQGP--DIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYT 466
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V +L L G VH+ + GF D V L+ MY + G +AR++FD +
Sbjct: 467 YVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLK 526
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R SWT ++S YA+ + ++A+ F +M + P+ T+ + +S C L G
Sbjct: 527 ERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQ 586
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+Y G +V V +AL+DMY KCG++ DA LF +V W T+I G A +G
Sbjct: 587 LHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGH 645
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+AL+ F ++++ P+ +TF+ VL AC+H G L++G + GI+ P L+H
Sbjct: 646 GYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGIT--PTLEH 703
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM D+L + GKL EA + MP+ DA +W T+L AC++H NIEI E A LF+ +
Sbjct: 704 YACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQ 763
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
P + + ++N YA RW+ VA +R+M+ VKK PG S INGK F ++D
Sbjct: 764 PDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 216/533 (40%), Gaps = 43/533 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + +A L LF +M + + PN KAC SDL ++ +H V
Sbjct: 129 WTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAV 188
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K +V C +D A + + VR SWNA+L +A+ G V+
Sbjct: 189 KLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVML 248
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F + G + T+ + + + ++VH I G++ D + N I Y+
Sbjct: 249 VFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYS 308
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + A VF I+E VV + M++ D ++ + + M G + + T
Sbjct: 309 KCLSAEDAYEVFARIDE--PDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTF 366
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V L + R +H+H + GF V + ++ MY K G + A + FD +
Sbjct: 367 VGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQG 426
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
SW ++SG+ + + LR+F + G L + T + ++ C L G
Sbjct: 427 PDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQV 486
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G + + V L+DMY + G +AR +F L E+ V SWT +++ A E
Sbjct: 487 HACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEG 546
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACT-----------HTGFLEKGWAISIIQYDDK 476
+A++ F ++ + RPN T L C+ H+ ++ GW S++
Sbjct: 547 EKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSVVS---- 602
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S + D+ + G L +A + + D W T++C H
Sbjct: 603 -----------SALVDMYVKCGNLADA-EMLFDESDTHDLVEWNTIICGYAQH 643
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 165/373 (44%), Gaps = 2/373 (0%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ KC RL A +FD M RDV +W AM+ G LRLF M G+ + +
Sbjct: 105 YCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFAL 164
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+A L VH+ + + D V ++ + +Y C ++ +AE ++
Sbjct: 165 AAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERAL--LDS 222
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+R+ VSWN+++ + + + ++ +G + T+ ++L + G+
Sbjct: 223 PVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQ 282
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH I G + D + N LI MYSKC + A +F I + V + MIS + +
Sbjct: 283 AVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHD 342
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
EA +F M G P+ T + + ++G + L + + G VC+
Sbjct: 343 MAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCD 402
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
A++ MY K G++ DA F + + SW T+++G L +F +L+ +
Sbjct: 403 AIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLA 462
Query: 445 NRVTFLAVLQACT 457
N+ T++ +L+ CT
Sbjct: 463 NKYTYVGILRCCT 475
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 4/313 (1%)
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
Q ++ L K++H+ + G D + ++ ++ Y KC L A VF G+ R
Sbjct: 68 QGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHR--D 125
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
VV+W +MV+ T +L + M G + + + L + L VH+
Sbjct: 126 VVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHA 185
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ D V ++L+ Y CG++D A R L D R+ VSW A+++ YA+ GD
Sbjct: 186 QAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPV-RSDVSWNALLNEYARDGDYA 244
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
+ + +F + +G+ T+ +++ C + G + G+ GL+ + ++ N LI
Sbjct: 245 KVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLI 304
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
+MYSKC S DA E+F + E VV + MI+ + EA D+F Q+ ++ ++PN+
Sbjct: 305 EMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQY 364
Query: 448 TFLAVLQACTHTG 460
TF+ + + TG
Sbjct: 365 TFVGLAIVASRTG 377
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 22/237 (9%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
++ + + L AL +G+ +H+ + G D + ++L++MY KCG + AR +F
Sbjct: 59 ELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVF 118
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG------ 356
DG+ R V+WTAM+S GD ALRLF M G +P+ + + + C
Sbjct: 119 DGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLG 178
Query: 357 -----QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
+ A++L FD Y V ++L++ Y CG + A P +
Sbjct: 179 FTPQVHAQAVKLEGLFDPY-----------VSSSLVEAYVSCGEVDVAERALLDSPVRSD 227
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
VSW ++ A +G++ + + +F +L+E ++ T VL+ C G + G A+
Sbjct: 228 VSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAV 284
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
DE LRL +L + + + GC S AL GK G + + + ++L
Sbjct: 50 DERLRL--------RAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSL 101
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
++MY KCG + DAR +F +P + VV+WT M++ G+ AL LF ++ E + PN
Sbjct: 102 LNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNG 161
Query: 447 VTFLAVLQACT---HTGFLEK--GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
A L+ACT GF + A+ + D +S + + SC G++
Sbjct: 162 FALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSC--------GEVD 213
Query: 502 EALDFVQSMPIKSDAGIWGTLL 523
A + P++SD W LL
Sbjct: 214 VAERALLDSPVRSDVS-WNALL 234
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 136/338 (40%), Gaps = 25/338 (7%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+ + I WN+ + + N L +F+++ + N T+ I + C L DL +
Sbjct: 423 LMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRF 482
Query: 73 SQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+H ++KS F V+ A +FD + RDV SW ++ +A+
Sbjct: 483 GCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAK 542
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
E + F +M + + T+ L +HS+ I G ++ V V
Sbjct: 543 TDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-V 601
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
+ + Y KC +L AE++F E +V WN+++ G +L ++ M+
Sbjct: 602 SSALVDMYVKCGNLADAEMLF--DESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDE 659
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGR----LVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
G D T V +LS+ L +GR L+ S YG + ++ + +K G
Sbjct: 660 GNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSS---VYGITPTLEHYACMVDILAKAGK 716
Query: 295 IDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEALR 331
+ A L + + S W ++ G+++ A R
Sbjct: 717 LAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAER 754
>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
Length = 576
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 273/519 (52%), Gaps = 35/519 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ IR + H + L+R M + PN TFPF+ KAC+ L+DL + IH H
Sbjct: 67 YNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAA 126
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+++C R A +F +M +RDV +WNAML G+A G + +
Sbjct: 127 AVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 186
Query: 128 LFYNMR-LVGIQADFVTVMGLTQAAIHAKHLSLLK--SVHSFGIHIGVDAD---VSVCNT 181
+M+ G++ + T++ L + A+H +L + SVH++ + +D + V +
Sbjct: 187 HLLDMQDRGGLRPNASTLVSLLP--LLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTA 244
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF- 240
+ YAKC L A VF G+ +R V+W++++ G D+ ++ N ++ M+ G
Sbjct: 245 LLDMYAKCKHLVYACRVFHGMT--VRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMC 302
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
L T+V S L L G +H+ G D++ N+L+SMY+K G I+ A +
Sbjct: 303 FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATM 362
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LFD I + +S+ A++SGY Q G +EA +F M+A PD+ T++S+I C A
Sbjct: 363 LFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAA 422
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ G+ GL +CN+LIDMY+KCG I +R++F +P + +VSW TMIAG
Sbjct: 423 LQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG 482
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGI 478
++G EA LF + P+ VTF+ ++ AC+H+G + +G W +D
Sbjct: 483 YGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHW------FDTMTH 536
Query: 479 SYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
Y P ++HY CM DLL R G L EA F+QSMP+K+D
Sbjct: 537 KYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKAD 575
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 212/465 (45%), Gaps = 21/465 (4%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
+ Q + HI + +L A ++FD + D ++NA++ ++ G + L+ +
Sbjct: 36 WQQELEQHIARG------QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRS 89
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M + + T + +A L +++H+ +G+ D+ V I Y +C
Sbjct: 90 MLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCAR 149
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSL 250
A VF + +R VV+WN+M+AG + ++ M G R + +T+VSL
Sbjct: 150 FGPAANVFAKMP--MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSL 207
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLD---VSVINTLISMYSKCGDIDSARVLFDGICD 307
L AL QG VH++ + D + V + L+ MY+KC + A +F G+
Sbjct: 208 LPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV 267
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LPDLVTVLSMISGCGQSGALELGKW 366
R V+W+A+I G+ + EA LF M G +V S + C L +G
Sbjct: 268 RNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ 327
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G+ ++ N+L+ MY+K G I +A LF + K +S+ +++G NG+
Sbjct: 328 LHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGK 387
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
EA +F ++ +++P+ T ++++ AC+H L+ G S+I +G++ +
Sbjct: 388 AEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVII---RGLALETSI 444
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G++ + MP + D W T++ IH
Sbjct: 445 --CNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIH 486
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 261/518 (50%), Gaps = 43/518 (8%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE---LVFCGIEERLRTVVSWN 213
S +K VH+ I G+ V I K D + M LVF + W
Sbjct: 55 FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVD-VPMGSYPLLVFGQVN--YPNPFLWT 111
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+M+ G +S NFY M +G T +L + + G+ VH+ I
Sbjct: 112 AMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILI 171
Query: 274 G-FDLDVSVINTLISMYSKCG-------------------------------DIDSARVL 301
G F D+ V N++I +Y KCG D++SA L
Sbjct: 172 GGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGL 231
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + V+WTAM++GYAQ G EAL F M+ G D VT+ +IS C Q GA+
Sbjct: 232 FDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV 291
Query: 362 ELGKWFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+ W + A G NV+V +ALIDMYSKCGS +A ++F + E+ V S+++MI
Sbjct: 292 KHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMIL 351
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A++G AL LFH +++ ++RPN+VTF+ +L AC+H G +E+G + +K
Sbjct: 352 GYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR--QLFAKMEKFFG 409
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P DHY+CM DLLGR G L+EALD V++MP++ + G+WG LL AC+IH N +I + A
Sbjct: 410 VAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAA 469
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH-INGKTCT 598
LFKLEP+ Y+ ++N YA GRW+ V+ +R +++ KK PG S F NG+
Sbjct: 470 NELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHD 529
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIP 636
F A D H S L L R Y +L P
Sbjct: 530 FFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAP 567
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 199/478 (41%), Gaps = 89/478 (18%)
Query: 44 QMKQNDIEPNNLTFPFIA--------KACAKLSD-LIYSQM--IHGHIVKSPFVKCD--- 89
Q Q PN + FP + + + L D ++SQ+ +H HI+++ +C
Sbjct: 18 QNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVL 77
Query: 90 --------RLDCAYK-----IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
++D +F ++ + W AM+ G+A G L + MR G
Sbjct: 78 TKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDG 137
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKMA 195
+ T L +A A ++ L K VH+ I IG +D+ V N+ I Y KC L A
Sbjct: 138 VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCA 197
Query: 196 ELVFCGIEER-----------------------------LRTVVSWNSMVAGCTYGDKFD 226
VF + ER + +V+W +MV G +
Sbjct: 198 RKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPK 257
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI--NT 284
++L +++ M G D T+ ++S+ A+ + GF +V+ +
Sbjct: 258 EALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSA 317
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MYSKCG D A +F+ + +R S+++MI GYA G AL+LF M P+
Sbjct: 318 LIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPN 377
Query: 345 LVTVLSMISGCGQSGALELG--------KWF------DNYACSGGLKDNVMVCNALIDMY 390
VT + ++S C +G +E G K+F D+YAC ++D+
Sbjct: 378 KVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC-------------MVDLL 424
Query: 391 SKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
+ G + +A +L +P E W ++ C ++G A ++L +L+ PN +
Sbjct: 425 GRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLE--PNGI 480
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 52/292 (17%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W + IR + ++ + +M+++ + P + TF + KAC ++ + +H
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVAS------------------ 108
G+ + +VKC L CA K+FDEM+ RDV S
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 109 -------------WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH-- 153
W AM+ G+AQ G + L F M+ VG++ D VT+ G+ A
Sbjct: 230 GLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289
Query: 154 -AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
KH + ++ + G +V V + I Y+KC A VF ++E R V S+
Sbjct: 290 AVKHANWIRDIAERS-GFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE--RNVFSY 346
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+SM+ G + +L + M+ R + T + +LS+ + QGR
Sbjct: 347 SSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR 398
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 289/558 (51%), Gaps = 33/558 (5%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A +F + ++ WN M G A + L+L+ M +G+ + T + ++
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER----- 205
+K + +H + +G D D+ V + IS Y + L+ A VF R
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 206 ------------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ VVSWN+M++G + ++L ++ MM R
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D +T+V+++S+ ++ GR VH +GF ++ ++N LI +YSKCG++++A L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + + +SW +I GY EAL LF M +GE P+ VT+LS++ C GA+
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 362 ELGKWFDNYACS--GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
++G+W Y G+ + + +LIDMY+KCG I A ++F ++ K + SW MI
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A++G + DLF ++ ++ ++P+ +TF+ +L AC+H+G L+ G I D ++
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P+L+HY CM DLLG G KEA + + M ++ D IW +LL ACK+H N+E+GE A
Sbjct: 504 --PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFA 561
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L K+EP + YV ++N YA GRW+ VA R ++ +KK PG S I+ F
Sbjct: 562 ENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEF 621
Query: 600 TAEDRYHAESELTYPVLD 617
D++H + Y +L+
Sbjct: 622 IIGDKFHPRNREIYGMLE 639
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 196/393 (49%), Gaps = 53/393 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ R ++ L L+ M + PN+ TFPF+ K+CAK Q IHGH++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 82 K--------------SPFVKCDRLDCAYKI------------------------------ 97
K S +V+ RL+ A+K+
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 98 -FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
FDE+ V+DV SWNAM+ G+A+ G + L LF +M ++ D T++ + A +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNS 214
+ L + VH + G +++ + N I Y+KC +L+ A CG+ ERL + V+SWN+
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA----CGLFERLPYKDVISWNT 337
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH--GIH 272
++ G T+ + + ++L ++ M+ +G + T++S+L + A+ GR +H +
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
G S+ +LI MY+KCGDI++A +F+ I ++ SW AMI G+A G D + L
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
F M G PD +T + ++S C SG L+LG+
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 39/303 (12%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLIS---MYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
R++H+ I G ++ LI + + A +F I + + W M G+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
A D AL+L+ M + G LP+ T ++ C +S A + G+ + G ++
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT------------------------ 416
V +LI MY + G + DA ++F P + VVS+T
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 417 -------MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
MI+G A G + EAL+LF +M+ ++RP+ T + V+ AC +G +E G +
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ DD G N L + + DL + G+L+ A + +P K D W TL+ H
Sbjct: 290 -LWIDDHGFGSN--LKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLI-GGYTH 344
Query: 530 LNI 532
+N+
Sbjct: 345 MNL 347
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 261/471 (55%), Gaps = 6/471 (1%)
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H+ I G + ++ + + + YAKCD + A+ VF G+E+ + VSW S+++G +
Sbjct: 1338 IHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQ--VSWTSIISGFSKN 1395
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV-QGRLVHSHGIHYGFDLDVSV 281
+ +++ F++ M+ + + + T VS +S+ E + Q L+H+H + GF + V
Sbjct: 1396 GRGKEAILFFKEMLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFV 1455
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
++ LI YSKCG ID A +LF +R + + +MISGY+Q +EAL+LF M G
Sbjct: 1456 VSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGL 1515
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
P T+ S+++ CG L+ G+ + G + NV V +AL+DMYSKCGSI +AR
Sbjct: 1516 XPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARC 1575
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQACTHTG 460
+F EK V WT+MI G A +G E L LF +L+ E P+ + F AVL AC H G
Sbjct: 1576 VFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAG 1635
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
FL+KG D G+ P+LD Y+C+ DL R G L++A + +++ P + ++ +WG
Sbjct: 1636 FLDKGIDYFNQMRRDYGLV--PDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWG 1693
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
+ L +CK++ E+G A LFK+EP S APYV MA+ YA G W V IR +MK+
Sbjct: 1694 SFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKG 1753
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
++K G S ++ + F D H S L+ L L +E Y+
Sbjct: 1754 LRKSAGWSWVEVDKRVHVFXVADASHPRSRDICVELERLNLEMKEVGYTPQ 1804
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 196/419 (46%), Gaps = 21/419 (5%)
Query: 26 IREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF 85
IR A + N + L F +M + +P +CAKL + IH I+++ F
Sbjct: 1289 IRPAKHAN-VREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGF 1347
Query: 86 --------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
KCD + A ++FD M D SW +++ GF++ G + + F
Sbjct: 1348 EDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKE 1407
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M I+ + VT + A + + +H+ + +G V + I Y+KC
Sbjct: 1408 MLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCG 1467
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
+ A L+F E R + +NSM++G + +++L + M NG T+ S+
Sbjct: 1468 RIDQAVLLFGTTIE--RDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSI 1525
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L++ L QGR VHS G + +V V++ L+ MYSKCG ID AR +F ++
Sbjct: 1526 LNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNT 1585
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELG-KWFD 368
V WT+MI+GYAQ G E L LF + G PD + ++++ C +G L+ G +F+
Sbjct: 1586 VLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFN 1645
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGE 426
GL ++ L+D+Y + G + A+EL A P E V W + ++ C L GE
Sbjct: 1646 QMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGE 1704
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G +H+ I GF+ ++ + + L+ +Y+KC I A+ +FDG+ +VSWT++ISG+++
Sbjct: 1335 GVQIHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSK 1394
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGC-GQSGALELGKWFDNYACSGGLKDNVM 381
G EA+ F M + P+ VT +S IS C G + + G
Sbjct: 1395 NGRGKEAILFFKEMLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTF 1454
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
V + LID YSKCG I A LF E+ + + +MI+G + N EAL LF Z+
Sbjct: 1455 VVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNG 1514
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAI 468
L P T ++L AC L++G +
Sbjct: 1515 LXPTDHTLTSILNACGSLTILQQGRQV 1541
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 146/362 (40%), Gaps = 55/362 (15%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ--MIHGH 79
W S I + +L F++M + I+PN +T+ AC L + I+ Q ++H H
Sbjct: 1385 WTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISACTGL-ETIFDQCALLHAH 1443
Query: 80 IVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+VK F KC R+D A +F RD +N+M+ G++Q E
Sbjct: 1444 VVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEA 1503
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L+LF MR G+ T+ + A L + VHS +G +++V V + +
Sbjct: 1504 LKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDM 1563
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN-FYRHMMYNGFRLDV 244
Y+KC + A VF E + V W SM+ G + + L F R + GF D
Sbjct: 1564 YSKCGSIDEARCVFXQAVE--KNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDH 1621
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFD 303
++L++ C H GF D + N + Y D+D
Sbjct: 1622 ICFTAVLTA--CN--------------HAGFLDKGIDYFNQMRRDYGLVPDLD------- 1658
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ ++ Y + G L +A L MEA P+ V S +S C G EL
Sbjct: 1659 --------QYACLVDLYVRNGHLRKAKEL---MEAXPXEPNSVMWGSFLSSCKLYGEAEL 1707
Query: 364 GK 365
G+
Sbjct: 1708 GR 1709
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 288/571 (50%), Gaps = 42/571 (7%)
Query: 96 KIFDEMAVRDVASWNAMLVGFA-------QMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
++F M RD S+NA++ GF+ G +LR + ++ +T+ G+
Sbjct: 97 RLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMV 156
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDA-------------------------------DVS 177
AA +L + VH + +G A +V
Sbjct: 157 MAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVV 216
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
+ NT I+ +C ++ A VF + + R ++W +MV G T ++L+ +R M
Sbjct: 217 MYNTMITGLLRCKMVEEARGVFEAMVD--RDSITWTTMVTGLTQNGLQSEALDVFRRMRA 274
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
G +D T S+L++ A +G+ +H++ I +D ++ V + L+ MYSKC I
Sbjct: 275 EGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRL 334
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +F + + +SWTAMI GY Q G +EA+R+F M+ G P+ T+ S+IS C
Sbjct: 335 AEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCAN 394
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+LE G F A GL+ + V +AL+ +Y KCGSI DA LF +P VS+T +
Sbjct: 395 LASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTAL 454
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
++G A G+ E +DLF +++ ++PN VTF+ VL AC+ +G +EKG + D G
Sbjct: 455 VSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHG 514
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
I DHY+CM DL R G+LKEA +F++ MP DA W TLL AC++ ++EIG++
Sbjct: 515 IVLLD--DHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKW 572
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
A L K +P + A YV + + +A G W VA +R M+ QVKK PG S +
Sbjct: 573 AAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVH 632
Query: 598 TFTAEDRYHAESELTYPVLDCLALHSREEAY 628
F+A+D+ H S Y L L EE Y
Sbjct: 633 IFSADDQSHPFSGTIYEKLQWLNSKMAEEGY 663
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 180/362 (49%), Gaps = 14/362 (3%)
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
++Y+ MI G ++C ++ A +F+ M RD +W M+ G Q G L +F
Sbjct: 216 VMYNTMITG------LLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVF 269
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
MR G+ D T + A K +H++ I D ++ V + + Y+KC
Sbjct: 270 RRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKC 329
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
+++AE VF + + ++SW +M+ G ++++ + M +G + + T+ S
Sbjct: 330 RSIRLAEAVFRRMT--CKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGS 387
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
++SS +L +G H + G ++V + L+++Y KCG I+ A LFD +
Sbjct: 388 VISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHD 447
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFD 368
+VS+TA++SGYAQ G E + LF M G P+ VT + ++S C +SG +E G +F
Sbjct: 448 QVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFH 507
Query: 369 NYACSGG--LKDNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNG 425
+ G L D+ C +ID+YS+ G + +A E +P + W T+++ C L G
Sbjct: 508 SMQQDHGIVLLDDHYTC--MIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565
Query: 426 EF 427
+
Sbjct: 566 DM 567
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 162/377 (42%), Gaps = 43/377 (11%)
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D ++ N +S+ A L + +F + +R VS+N+++AG + + Y
Sbjct: 73 DPNLFTRNALLSALAHARLLPDMDRLFASMPQR--DAVSYNALIAGFSGAGAPARAAGAY 130
Query: 233 RHMMYNGFRLDVTTV----VSLLSSFVCPEAL---VQGRLVHSHGIHYGFDLDVSVINTL 285
R ++ +D V +++ + AL GR VH + GF + L
Sbjct: 131 RALLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPL 190
Query: 286 ISMYSK-------------------------------CGDIDSARVLFDGICDRTRVSWT 314
+ MY+K C ++ AR +F+ + DR ++WT
Sbjct: 191 VDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWT 250
Query: 315 AMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSG 374
M++G Q G EAL +F M A G D T S+++ CG A E GK Y
Sbjct: 251 TMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRT 310
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
N+ V +AL+DMYSKC SI A +F + K ++SWT MI G NG EA+ +F
Sbjct: 311 LYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVF 370
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
++ ++PN T +V+ +C + LE+G + P + S + L
Sbjct: 371 SEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVS---GLRPYITVSSALVTLY 427
Query: 495 GRKGKLKEALDFVQSMP 511
G+ G +++A MP
Sbjct: 428 GKCGSIEDAHRLFDEMP 444
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 146/359 (40%), Gaps = 49/359 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + L +FR+M+ + + TF I AC L+ + IH + +
Sbjct: 249 WTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTI 308
Query: 82 KS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ + KC + A +F M +++ SW AM+VG+ Q G E +R
Sbjct: 309 RTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVR 368
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M+ GI+ + T+ + + + L H + G+ ++V + ++ Y
Sbjct: 369 VFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYG 428
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC ++ A +F E VS+ ++V+G K ++++ + M+ G + + T
Sbjct: 429 KCGSIEDAHRLF--DEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTF 486
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ +LS+ LV+ + H + D VL D
Sbjct: 487 IGVLSA-CSRSGLVEKGCSYFHSMQQ----------------------DHGIVLLDD--- 520
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+T MI Y++ G L EA M PD + +++S C G +E+GKW
Sbjct: 521 ----HYTCMIDLYSRSGRLKEAEEFIRQMP---RCPDAIGWATLLSACRLRGDMEIGKW 572
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 13 IYRSST---INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
++R T I W + I + + +F +M+ + I+PN+ T + +CA L+
Sbjct: 338 VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLAS 397
Query: 70 LIYSQMIHGHIVKS---PFV-----------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L H + S P++ KC ++ A+++FDEM D S+ A++ G
Sbjct: 398 LEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSG 457
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGL----TQAAIHAKHLSLLKSVHSFGIHIG 171
+AQ G + + LF M L G++ + VT +G+ +++ + K S S+ +
Sbjct: 458 YAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVL 517
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
+D D C I Y++ LK AE F R + W ++++ C
Sbjct: 518 LD-DHYTC--MIDLYSRSGRLKEAE-EFIRQMPRCPDAIGWATLLSAC 561
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 96/257 (37%), Gaps = 69/257 (26%)
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM---- 336
V+N L++ Y++ G + AR LFD + D + A++S A L + RLF +M
Sbjct: 47 VLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRD 106
Query: 337 ----------------------------------EAAGELPDLVTVLSMISGCGQSGALE 362
+ A P +T+ M+ G
Sbjct: 107 AVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDRA 166
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD------------------------ 398
LG+ G + L+DMY+K G IGD
Sbjct: 167 LGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLL 226
Query: 399 -------ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
AR +F A+ ++ ++WTTM+ G NG EALD+F ++ + ++ TF +
Sbjct: 227 RCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGS 286
Query: 452 VLQACTHTGFLEKGWAI 468
+L AC E+G I
Sbjct: 287 ILTACGALAASEEGKQI 303
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 241/448 (53%), Gaps = 33/448 (7%)
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+M+ G + + +++L Y HM+Y+ + T LL + A + + +H+H I
Sbjct: 86 WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHII 145
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD---- 327
GF ++ N+L+++YSK GDI SAR+LFD + R VSW +MI GY + G+++
Sbjct: 146 KMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYE 205
Query: 328 ---------------------------EALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
EAL LF M+ AG D V ++S + C G
Sbjct: 206 IFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGV 265
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ GKW Y ++ + ++ LIDMY+KCG + +A E+F + EK V WT MI+G
Sbjct: 266 LDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISG 325
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A++G EAL+ F ++ + PN++TF +L AC+H G + + A + + ++ +
Sbjct: 326 YAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHE--AKLLFESMERIHGF 383
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P ++HY CM DLLGR G LKEA + +++MP+K +A IWG LL AC IH N+E+G+ +
Sbjct: 384 KPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGK 443
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L +++P Y+ +A+ +A G W+ A +R MK V K PG S+ +NG F
Sbjct: 444 ILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFL 503
Query: 601 AEDRYHAESELTYPVLDCLALHSREEAY 628
A D H + + +L+ + REE Y
Sbjct: 504 AGDESHPQIKEIDHMLEQIVERLREEGY 531
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 195/438 (44%), Gaps = 50/438 (11%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV----------------KCDRLDCA 94
E N + + C+ + +L + IHG ++K+ + L A
Sbjct: 15 ESNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYA 71
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+FD + + WN M+ G++ E L L+++M + + T L +A
Sbjct: 72 RTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER--------- 205
+ +H+ I +G +++ N+ ++ Y+K D+K A L+F +++R
Sbjct: 132 SASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191
Query: 206 --------------------LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
R ++SW SM++GC K ++LN + M G +LD
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
+VS L + L QG+ +H++ + ++D + LI MY+KCGD++ A +F +
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ WTAMISGYA G EAL F M+ AG P+ +T +++ C +G + K
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 366 -WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCAL 423
F++ G K ++ ++D+ + G + +A EL +P K + W ++ C +
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431
Query: 424 NGEFVEALDLFHQLMELD 441
+G + L+++D
Sbjct: 432 HGNLELGKQIGKILIQVD 449
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 158/365 (43%), Gaps = 50/365 (13%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI+R +T WN+ IR N E + LLL+ M + + N TFPF+ KAC+ +S
Sbjct: 75 FDRIFRPNTF-MWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA 133
Query: 70 LIYSQMIHGHIVKSPF-------------------------------------------- 85
+Q IH HI+K F
Sbjct: 134 SEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDG 193
Query: 86 -VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
KC ++ AY+IF+ M R++ SW +M+ G G + L LF+ M+ GI+ D V +
Sbjct: 194 YTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVAL 253
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ QA L K +H++ ++ D + I YAKC DL+ A VF +EE
Sbjct: 254 VSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEE 313
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ +V W +M++G + ++L ++ M G + T +L++ + + +
Sbjct: 314 KGVSV--WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 265 LV-HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQ 322
L+ S +GF + ++ + + G + A L + + + + W A+++
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431
Query: 323 KGDLD 327
G+L+
Sbjct: 432 HGNLE 436
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 272/531 (51%), Gaps = 13/531 (2%)
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
N ML +A G + L+ M+ +G+ + T + + + VH +
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G +D+ V + YAKC ++ A VF + +R VV W +M+ ++ +L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRM--LIRDVVCWTAMITLYEQAERPLKAL 218
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL---VHSHGIHYGFDLDVSVINTLI 286
+R M GF D T +S+ S+ L GR+ VH + + GF DVSV N+++
Sbjct: 219 MLFRKMQEEGFLGDEITAISVASAV---GQLGDGRMAISVHGYAVLNGFIGDVSVGNSIV 275
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY+KCG+++ AR++FD + +R +SW +M+SGY Q G +AL LF M+A+ P+ V
Sbjct: 276 GMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPV 335
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY-- 404
T L M+S C G+ LG+ N+ S + + + NA++DMY KCG + A E+F
Sbjct: 336 TALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNC 395
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
L E+ V SW +I+G ++G EAL+LF ++ + PN +TF ++L AC+H G +++
Sbjct: 396 ELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDE 455
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G D +S PE+ HY+CM D+LGR G L EA ++ +P + +WG LL
Sbjct: 456 GRKCFA---DMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLL 512
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKF 584
AC+IH N E+GE A LF+LEP YV M+N YA +W V +R MK +KK
Sbjct: 513 ACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKP 572
Query: 585 PGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
S+ + F D+ Y ++ LA+ + Y L +
Sbjct: 573 AAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCV 623
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 208/420 (49%), Gaps = 19/420 (4%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N+ +R N +++ + L+ M++ + NN T+PF+ K CA ++ +++HG +V+
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160
Query: 83 SPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ F KC + A+++FD M +RDV W AM+ + Q L L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M+ G D +T + + A + SVH + + G DVSV N+ + YAK
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAK 280
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C +++ A LVF +EE R +SWNSM++G T + D+L+ + M + + T +
Sbjct: 281 CGNVERARLVFDRMEE--RNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTAL 338
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG--IC 306
++S+ + GR +H+ I D+D ++ N ++ MY KCGD+D+A +F+ +
Sbjct: 339 IMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELG 398
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R SW +ISGY G EAL LF M+ G P+ +T S++S C +G ++ G+
Sbjct: 399 ERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRK 458
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNG 425
++ + ++DM + G + +A L +P + W ++ C ++G
Sbjct: 459 CFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHG 518
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 15/311 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I K L+LFR+M++ + +T +A A +L D + +HG+ V
Sbjct: 201 WTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAV 260
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F+ KC ++ A +FD M R+ SWN+ML G+ Q G + L
Sbjct: 261 LNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALS 320
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ + VT + + A + L + +H+F I +D D ++ N + Y
Sbjct: 321 LFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYM 380
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A +F E R V SWN +++G ++L + M G + T
Sbjct: 381 KCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITF 440
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ + +GR + ++ ++ M + G ++ A L I
Sbjct: 441 TSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPS 500
Query: 308 R-TRVSWTAMI 317
R + W A++
Sbjct: 501 RPSDEVWGALL 511
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 11/227 (4%)
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVS-VINTLISMYSKCGDIDSARVLFDGICDRTRVSWT 314
C +L +L+HS GF L + LI +YSK GD+ SAR LFD
Sbjct: 34 CCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQ 93
Query: 315 A--------MISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
A M+ YA G EA+ L+ M+ G + T ++ C G+
Sbjct: 94 APNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEV 153
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G ++ V AL+DMY+KCG IGDA E+F + + VV WT MI
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAER 213
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
++AL LF ++ E + +T ++V A G + AIS+ Y
Sbjct: 214 PLKALMLFRKMQEEGFLGDEITAISVASAVGQLG--DGRMAISVHGY 258
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 189/592 (31%), Positives = 295/592 (49%), Gaps = 38/592 (6%)
Query: 7 PPRLNRIYRSSTI--NQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
P + R R ST N+ Q + A+ L+ +Q D P + + + C
Sbjct: 25 PGKAKRSGRHSTFFDNRRQQQGKSALPGG-LDNALVWIDSHQQEDCAP---AYGNLLRDC 80
Query: 65 AKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWN 110
+L+ + IH H+VK+ + KC L+ A K+FD M RD SW+
Sbjct: 81 GELA---AGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWS 137
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA--AIHAKHLSLLKSVHSFGI 168
M+ G+ + G ++L+ M I D T + A ++ + L + K +H+
Sbjct: 138 KMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMK 194
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVF--CGIEERLRTVVSWNSMVAGCTYGDKFD 226
I + DV V + ++ +AKC LK + VF C R + V+ WNSM+ +
Sbjct: 195 RIWLKPDVFVDSALVTMFAKCGSLKESREVFDDC----RWKDVLFWNSMIVAYSQSGHPR 250
Query: 227 DSLNFYRHMMYNG--FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
+++ ++ M + + T ++L++ E L QG+ VH + GF D + N+
Sbjct: 251 EAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENS 310
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L++MY+KCG I AR +FDG+ RT VSWT +IS Y +KG EAL L+ M + G P+
Sbjct: 311 LVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPN 370
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+T S++S C GALE GK + G K ++ V NAL+ +Y KCGS+ AR++F
Sbjct: 371 GITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFD 430
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+ + VVSWT MI+ A + EA+ L+ + ++ + + VL AC+ G LE
Sbjct: 431 RMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLES 490
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
D G +L+ Y CMA +LGR G+L EA + + MP +++ W LL
Sbjct: 491 ARHYFGCLTRDCGAP--AKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLA 548
Query: 525 ACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
ACK H ++E G VA LF+LEP + APYV ++N Y GR + A +R M
Sbjct: 549 ACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKM 600
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 160/384 (41%), Gaps = 27/384 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQND--IEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WNS I + + LF+ M + +EPN +T+ + AC+ + DL + +H
Sbjct: 236 WNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQ 295
Query: 80 IVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+V + F KC + A ++FD M R V SW ++ + + G
Sbjct: 296 MVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREA 355
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L L+ M G++ + +T + A L K+VH+ G D++V N +S
Sbjct: 356 LDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSL 415
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC + A VF + ++R VVSW +M++ + ++++ Y+ M G +
Sbjct: 416 YGKCGSVDSARKVFDRM--KIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSF 473
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGI---HYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
++L++ C +A + H G G + + ++ + G + A L
Sbjct: 474 IYGTVLTA--CSQAGLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELL 531
Query: 303 DGIC-DRTRVSWTAMISGYAQKGDLDEALR---LFFAMEAAGELPDLVTVLSMISGCGQS 358
+ + V+W +++ D++ R + F +E E P ++ ++ Q
Sbjct: 532 AVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQE 591
Query: 359 GALELGKWFDNYACSGGLKDNVMV 382
A + + + + G ++++V
Sbjct: 592 EAARVRRKMGDVIAAAGSGESIIV 615
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 275/532 (51%), Gaps = 42/532 (7%)
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
E+ + + M G D T L +A + +++VH+ + G+ + V +
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 183 ISSYAKCDDLKMAELVFCGIEERLR-TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+++YA D A + + ER R T V WN++++G +F ++ + M G
Sbjct: 85 VTAYAAGGDGAAARAL---LSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAA 141
Query: 242 LDVTTVVSLLSSFVCPEA---LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
T VS+LS+ C + ++ G VH + G D+ V N L+ MY++C D++SA
Sbjct: 142 PTPVTYVSVLSA--CGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESA 199
Query: 299 RVLFDGI-------------------------------CDRTRVSWTAMISGYAQKGDLD 327
LFDG+ +R VSWTAMI GY Q
Sbjct: 200 WKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFR 259
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
EAL +F M+ + D T++S+I+ C Q GALE+G+W Y G+K + V NALI
Sbjct: 260 EALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALI 319
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
DMYSKCGSI A ++F + + +WT +I G A+NG EA+++FH+++ + P+ V
Sbjct: 320 DMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEV 379
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV 507
TF+ VL ACTH G ++KG + + I+ P + HY C+ DL GR GK+ EALD +
Sbjct: 380 TFIGVLTACTHAGLVDKGREFFLSMRETYNIA--PNVVHYGCIIDLFGRAGKITEALDAI 437
Query: 508 QSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWD 567
MP+ ++ IWGTLL AC++H N EIGE V L +++P ++ Y ++N YA RW+
Sbjct: 438 DQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWE 497
Query: 568 GVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
V +R + +KK PG SL +NG F A D+ H S+ Y L+ +
Sbjct: 498 DVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESI 549
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 194/459 (42%), Gaps = 48/459 (10%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAY------ 95
+ +M P+ TFP + KA A+ S + +H H+VK + + +
Sbjct: 31 YARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAA 90
Query: 96 --------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
+ E WNA++ G + F +M G VT + +
Sbjct: 91 GGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSV 150
Query: 148 TQAAIHAKHLSLLK-SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
A LL VH + GV D+ V N + YA+C D++ A +F G++ R
Sbjct: 151 LSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRS 210
Query: 207 -----------------------------RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
R VSW +M+ G +F ++L +R M
Sbjct: 211 VVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQC 270
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+ D T+VS++++ AL G V + G +D V N LI MYSKCG I+
Sbjct: 271 SNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIER 330
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +F + R + +WTA+I G A G +EA+ +F M E PD VT + +++ C
Sbjct: 331 ALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTH 390
Query: 358 SGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WT 415
+G ++ G+ +F + + + NV+ +ID++ + G I +A + +P + W
Sbjct: 391 AGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWG 450
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
T++A C ++G + +L+++D P T +L
Sbjct: 451 TLLAACRVHGNSEIGELVTERLLQMD--PENSTVYTLLS 487
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
R+ T++ W + I V + L +FR+M+ +++ + T + ACA+L
Sbjct: 234 FGRMPERDTVS-WTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGA 292
Query: 70 LIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + + G+ + + KC ++ A +F +M RD +W A+++G
Sbjct: 293 LEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILG 352
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
A G+ E + +F+ M V D VT +G+ A HA
Sbjct: 353 LAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHA 391
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 296/561 (52%), Gaps = 25/561 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ I E + +LL++ M Q +P+ +TF + L +++H
Sbjct: 267 IIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHS 326
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
HIV+S + KC+ L+ +F++M R+V SWN M+ +A+ G
Sbjct: 327 HIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRK 386
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+++ M+L G++ D VT +GL + L L + VH + +AD+ + N+ ++
Sbjct: 387 AVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLN 446
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y +C +++ AE+VF GI +R V+SW +M+ + ++ D +L + + +G +
Sbjct: 447 MYGRCGEVEQAEMVFDGILQR--NVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTC 504
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T + L + V EAL +GRLVHS + G D DVS+ + L++MY +CG I A+ FD
Sbjct: 505 ITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDD 564
Query: 305 I-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ V+W+AMI+ + Q G E L+ M+ G T S +S C L
Sbjct: 565 TEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLRE 624
Query: 364 GKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
GK +Y + V N+L+ MY KCGS+ ARE+F + ++ W +I+G A
Sbjct: 625 GKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAIISGYA 684
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--WAISIIQYDDKGISY 480
+G+ +A++LFH++ + + P+ VTF+ +L C+H G L++G S+++ +
Sbjct: 685 QHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASMVE-----LGL 739
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P D+Y+C+ DLLGR GKL+EA +F+QS+ + +LL +CK H +++ G A
Sbjct: 740 EPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAE 799
Query: 541 CLFKLEPHSAAPYVEMANKYA 561
+ +++P S++ +V +++ Y+
Sbjct: 800 GIMEMDPRSSSAHVVLSSIYS 820
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 251/504 (49%), Gaps = 26/504 (5%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP-------------- 84
++L RQM ++P+N+T +C L ++IHG I +S
Sbjct: 86 IILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSM 145
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ C +D A ++FD M R+V +W AM+ A+ LE ++F M L G +++FVT
Sbjct: 146 YGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETS-LEQAFKVFRLMELEGFKSNFVTY 204
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ L QA + L + +H + + +CN I+ Y +C L+ A +F + E
Sbjct: 205 VTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVE 264
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R +++WN+++ ++++ Y+ M+ G + D T V+LL+ PEAL +
Sbjct: 265 R--DIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVK 322
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
LVHSH + G +++++ L++MYSKC ++ R LF+ + R +SW M++ YA+ G
Sbjct: 323 LVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHG 382
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+A+++ M+ G PD VT + +++ C S L+LG+ + G + ++++ N
Sbjct: 383 LGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWN 442
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+L++MY +CG + A +F + ++ V+SWT M+ + AL LFH + ++P
Sbjct: 443 SLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKP 502
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI---SIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
+TFL L AC L KG + ++ +D +S S + + GR G ++
Sbjct: 503 TCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLG------SALVAMYGRCGSIR 556
Query: 502 EALDFVQSMPIKSDAGIWGTLLCA 525
+A ++ + W ++ A
Sbjct: 557 DAKACFDDTEVRKNHVTWSAMIAA 580
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 239/484 (49%), Gaps = 33/484 (6%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
+AC KL L ++ +H IV++ + KC LD A++ F+ M+ ++V
Sbjct: 8 QACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVY 67
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+W A++ A + L M L G++ D +T++ + ++ L K +H
Sbjct: 68 TWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHGLI 127
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
G D+ + N +S Y C + A+ VF + R V++W +M+ G +
Sbjct: 128 AQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPA--RNVITWTAMI-GAHAETSLEQ 184
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+ +R M GF+ + T V+L+ + PE L G ++H + ++ + N LI+
Sbjct: 185 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 244
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY +CG ++ AR +F + +R ++W A+I+ Y Q G ++EA+ L+ M G PD VT
Sbjct: 245 MYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVT 304
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+++++ AL K ++ G+ N+ + AL+ MYSKC S+ D R LF +P
Sbjct: 305 FVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMP 364
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLE--- 463
++ V+SW M+ A +G +A+ + + M+LD ++P+ VT + +L CT + L+
Sbjct: 365 QRNVISWNVMVTAYAKHGLGRKAVQIT-EYMQLDGVKPDNVTCVGLLNVCTGSADLKLGR 423
Query: 464 --KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
GW I+ + + I +N L+ Y GR G++++A + V ++ + W
Sbjct: 424 KVHGW-IAEGRCEADLILWNSLLNMY-------GRCGEVEQA-EMVFDGILQRNVISWTA 474
Query: 522 LLCA 525
+L A
Sbjct: 475 MLTA 478
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 174/337 (51%), Gaps = 18/337 (5%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L QA K L + + +HS + +D V + N I +Y KC L A F ER+
Sbjct: 6 LLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETF----ERM 61
Query: 207 --RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+ V +W +++ C + ++ R M+ G + D T+++ L+S +AL G+
Sbjct: 62 SYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGK 121
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
L+H G D+ + N L+SMY CG +D A+ +FD + R ++WTAMI +A+
Sbjct: 122 LIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAET- 180
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
L++A ++F ME G + VT ++++ C + LE+G + +CN
Sbjct: 181 SLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCN 240
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
ALI MY +CG + DAR +F ++ E+ +++W +I +G EA+ L+ +++ +P
Sbjct: 241 ALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKP 300
Query: 445 NRVTFLAVL------QACT-----HTGFLEKGWAISI 470
++VTF+A+L +A T H+ +E G +I+I
Sbjct: 301 DKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINI 337
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)
Query: 256 CPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
CP+ AL R +HS + D V + N LI Y KC +D A F+ + + +W
Sbjct: 10 CPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVYTW 69
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
TA+I A A+ L M G PD +T+L+ ++ C S AL GK
Sbjct: 70 TAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHGLIAQ 129
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
G + ++++ NAL+ MY CGS+ DA+ +F A+P + V++WT MI G +A +
Sbjct: 130 SGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMI-GAHAETSLEQAFKV 188
Query: 434 FHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
F +LMEL+ + N VT++ ++QAC+ FLE G + + + P + +
Sbjct: 189 F-RLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCN---ALIT 244
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ GR G+L++A SM ++ D W L+ H ++E
Sbjct: 245 MYGRCGRLEDARAIFSSM-VERDIIAWNALITEYGQHGHVE 284
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/607 (30%), Positives = 288/607 (47%), Gaps = 31/607 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + W + I V ++ + +LF+++ ++ +PN ++F I AC +DL
Sbjct: 214 RERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGL 273
Query: 75 MIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H +I + S + +C L A ++FD + + SWNAM+ G+ + G
Sbjct: 274 KLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-G 332
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
F+E RLF +M+ G Q D T L L+ K +HS + +ADV+V
Sbjct: 333 FMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVAT 392
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
IS YAKC L+ A VF + E+ VSWN+ +A C ++ ++ M +
Sbjct: 393 ALISMYAKCGSLEEARKVFNQMPEK--NAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDV 450
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D T ++LL+S PE +GR +H +G + V N LISMY +CG + AR
Sbjct: 451 IPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADARE 510
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F I R SW AMI+ Y Q G A LF ++ G D T ++++
Sbjct: 511 VFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLED 570
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ G+ GL+ ++ + LI MYSKCGS+ DA +F + EK VV W M+A
Sbjct: 571 LDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAA 630
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
+ +AL LF Q+ + P+ T+ +VL AC G +E G K +
Sbjct: 631 YNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHG---KKFHTQLKEAAM 687
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
+ HY+CM LGR LKEA +F++ + +SDA +W +LL AC+IH N+ + E
Sbjct: 688 ETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVE 747
Query: 541 CLFKLEPHSAAPYVE-MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L ++ S+ E + N YA GRW+ V+ I+ M+ + + K+CT
Sbjct: 748 HLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGL----------LAPKSCTI 797
Query: 600 TAEDRYH 606
+H
Sbjct: 798 EVNSEFH 804
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 265/542 (48%), Gaps = 27/542 (4%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
SL P R + + W++ + N + + + + ++ N + + C
Sbjct: 2 SLTPNEGRRRIQESGSTWDASAKVGRNTWKGKSIRGGVQLLGKRGVQANLNFYARRLQEC 61
Query: 65 AKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWN 110
+ L + +H H+ + F KC ++ A +F M +DV SWN
Sbjct: 62 VQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWN 121
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
AM+ G+A G + + LFY M+ G+ Q F++++ Q I L + +HS
Sbjct: 122 AMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPI---VLEFGEQIHSHI 178
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
G ++DV+V I+ Y KC L++A VF E R R VVSW +M++G +
Sbjct: 179 TKAGYESDVNVSTALINMYCKCGSLELARKVFN--EMRERNVVSWTAMISGYVQHGDSKE 236
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+ ++ ++ +G + + + S+L + P L QG +H++ G + +V V N LIS
Sbjct: 237 AFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALIS 296
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY++CG + +AR +FD + RVSW AMI+GY + G ++EA RLF M+ G PD T
Sbjct: 297 MYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFT 355
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
S+++ C L GK + + +V V ALI MY+KCGS+ +AR++F +P
Sbjct: 356 YASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMP 415
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
EK VSW IA C +G EA +F Q+ D+ P+ VTF+ +L +CT E+G
Sbjct: 416 EKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRY 475
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
I + D G+ N + + + + GR GKL +A + + + D G W ++ A
Sbjct: 476 IH-GKIDQWGMLSNNLV--ANALISMYGRCGKLADAREVFYRIR-RRDLGSWNAMIAAYV 531
Query: 528 IH 529
H
Sbjct: 532 QH 533
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 262/533 (49%), Gaps = 26/533 (4%)
Query: 11 NRIYRS---STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
N +++S + WN+ I + + LF QM++ ++PN +F I AC
Sbjct: 106 NNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTP 165
Query: 68 SDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAML 113
L + + IH HI K+ + KC L+ A K+F+EM R+V SW AM+
Sbjct: 166 IVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 225
Query: 114 VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G+ Q G + LF + G Q + V+ + A + L +H++ G++
Sbjct: 226 SGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLE 285
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF-DDSLNFY 232
+V V N IS YA+C L A VF + R VSWN+M+AG YG+ F +++ +
Sbjct: 286 QEVLVGNALISMYARCGSLANARQVFDNLRSPNR--VSWNAMIAG--YGEGFMEEAFRLF 341
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
R M GF+ D T SLL+ L +G+ +HS + ++ DV+V LISMY+KC
Sbjct: 342 RDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKC 401
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G ++ AR +F+ + ++ VSW A I+ + G EA ++F M +PD VT ++++
Sbjct: 402 GSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLL 461
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
+ C E G++ G+ N +V NALI MY +CG + DARE+FY + + +
Sbjct: 462 NSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLG 521
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SW MIA +G A DLF + + ++ TF+ VL+A + L+ G I +
Sbjct: 522 SWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGL- 580
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ G+ + + + + + + G L++A +++ K D W +L A
Sbjct: 581 VEKAGLEKDIRI--LTTLIKMYSKCGSLRDAYSVFKNVQEK-DVVCWNAMLAA 630
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 290/582 (49%), Gaps = 47/582 (8%)
Query: 64 CAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASW 109
C ++ L ++ +H H +K+ F K D L A + F + V +
Sbjct: 255 CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETC 314
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIH 169
NAM+VG + G ++LF M GI V++ G+ A K
Sbjct: 315 NAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVK-------------- 360
Query: 170 IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSL 229
G D DV V N + Y KC L A LVF +E+R VSWN+++A + ++D++
Sbjct: 361 -GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR--DSVSWNTIIAALEQNECYEDTI 417
Query: 230 NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY 289
M+ +G D T S+L + ++L G +VH I G LD V +T++ MY
Sbjct: 418 VHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMY 477
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
KCG I A L D I + VSW ++I+G++ +EA + F M G PD T
Sbjct: 478 CKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYA 537
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+++ C +ELGK + + + + L+DMY+KCG++ D++ +F + +
Sbjct: 538 TVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKL 597
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG---W 466
VSW MI G AL+G+ EAL++F + + ++ PN TF+AVL+AC+H G L+ G +
Sbjct: 598 DFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYF 657
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
+ +Y P+L+H++CM +EAL F++SMP+++DA IW TLL C
Sbjct: 658 HLMTSRY-----KLEPQLEHFACMGP--------QEALKFIRSMPLEADAVIWKTLLSIC 704
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
KI ++E+ E A + +L+P ++ Y+ ++N YA G+W V+ R +M++ ++KK PG
Sbjct: 705 KIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPG 764
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
S + + F ++ H S Y +L+ L + Y
Sbjct: 765 CSWIEVQSEMHGFLVGEKVHPRSREVYEMLNNLICEMKLSGY 806
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 208/494 (42%), Gaps = 77/494 (15%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
DV SWNA+L G+ Q G +++ L M G+ D T+ L +A L+L +H
Sbjct: 127 DVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIH 186
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ + G++ DV + + Y KC L+ A F G+ E R VSW +++AGC ++
Sbjct: 187 ALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGE--RNSVSWGAVIAGCVQNEQ 244
Query: 225 FDDSL----------------NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR---- 264
+ L + H + N F D +++ + ++LV R
Sbjct: 245 YMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFF 304
Query: 265 -------------------------------LVHSHGIHY----------------GFDL 277
+ GI + GFD+
Sbjct: 305 GLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDV 364
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
DV V N ++ +Y KC + A ++F + R VSW +I+ Q ++ + M
Sbjct: 365 DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEML 424
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
+G D T S++ C +LE G A GL + V + ++DMY KCG I
Sbjct: 425 RSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMIT 484
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+A +L + + +VSW ++IAG +LN + EA F +++++ ++P+ T+ VL +C
Sbjct: 485 EALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCA 544
Query: 458 HTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
+ +E G I II+ + G + S + D+ + G + ++ + + K D
Sbjct: 545 NLATIELGKQIHGQIIKQEMLGDEFIS-----STLVDMYAKCGNMPDSQLMFEKVQ-KLD 598
Query: 516 AGIWGTLLCACKIH 529
W ++C +H
Sbjct: 599 FVSWNAMICGYALH 612
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 150/361 (41%), Gaps = 49/361 (13%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT +++YA D MA + C + + VVSWN++++G F D + M G
Sbjct: 101 NTMLTAYAHMGDTGMATSLLCVMPDP--DVVSWNALLSGYCQRGMFRDLVGLSIEMARCG 158
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D TT+ LL + + L G +H+ + G ++DV + L+ MY KC ++ A
Sbjct: 159 VAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDAL 218
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
F G+ +R VSW A+I+G Q L L +A +T LS
Sbjct: 219 HFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKA-------ITCLST-------- 263
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+ +A + +V A++D+Y+K S+ DAR F+ LP V + M+
Sbjct: 264 ----ARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMV 319
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G G EA+ LF + + V+ V AC KG+ + + +
Sbjct: 320 GLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEV----KGFDVDVCVRN----- 370
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK---------IHL 530
+ DL G+ L EA Q M + D+ W T++ A + +HL
Sbjct: 371 ---------AILDLYGKCKALVEAYLVFQEME-QRDSVSWNTIIAALEQNECYEDTIVHL 420
Query: 531 N 531
N
Sbjct: 421 N 421
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 263 GRLVHSHGIHYGFDL----DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
G H+HG+ FD D NT+++ Y+ GD A L + D VSW A++S
Sbjct: 80 GGAAHAHGV---FDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLS 136
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
GY Q+G + + L M G PD T+ ++ CG L LG A GL+
Sbjct: 137 GYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEM 196
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
+V +AL+DMY KC S+ DA F+ + E+ VSW +IAGC N +++ L+L
Sbjct: 197 DVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELL 252
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 19/233 (8%)
Query: 22 WNSQIREAVNKNEAHK-TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I A+ +NE ++ T++ +M ++ +E ++ T+ + KACA L L Y ++HG
Sbjct: 400 WNTII-AALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKA 458
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+KS + KC + A K+ D + +++ SWN+++ GF+ E
Sbjct: 459 IKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQ 518
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ F M +G++ D T + + + + L K +H I + D + +T + Y
Sbjct: 519 KFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMY 578
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYN 238
AKC ++ ++L+F +++ VSWN+M+ G +G F+ F R N
Sbjct: 579 AKCGNMPDSQLMFEKVQK--LDFVSWNAMICGYALHGQGFEALEMFERTQKAN 629
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 78/207 (37%), Gaps = 41/207 (19%)
Query: 355 CGQSG--ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
C +G AL G+ G + V N L+ MY++CG A +F +P + V
Sbjct: 39 CASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTV 98
Query: 413 SWTTM-------------------------------IAGCALNGEFVEALDLFHQLMELD 441
SW TM ++G G F + + L ++
Sbjct: 99 SWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCG 158
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD--HYSCMADLLGRKGK 499
+ P+R T +L+AC L G +Q + E+D S + D+ G+
Sbjct: 159 VAPDRTTLAVLLKACGGLDDLALG-----VQIHALAVKTGLEMDVRAGSALVDMYGKCRS 213
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCAC 526
L++AL F M ++ WG ++ C
Sbjct: 214 LEDALHFFHGMGERNSVS-WGAVIAGC 239
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 283/551 (51%), Gaps = 20/551 (3%)
Query: 52 PNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKI 97
PN T +AC L L+ + +HG +VK S + KC + A++
Sbjct: 565 PNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRS 624
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
F E+ +D+ SW +M+ +++MG+ + +F+ M + GI D + + + + ++ +
Sbjct: 625 FCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRV 684
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
K+ H I D V N +S Y K LK+AE F + E+ +WN MV+
Sbjct: 685 FEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQ--NFEAWNLMVS 742
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G + +R M G D ++VS++SS A R +H + I D
Sbjct: 743 GYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDE 802
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+VSV N+LI MY K G++ AR +F I R V+W +IS YA G EAL L+ M
Sbjct: 803 NVSVNNSLIDMYGKSGNLTIARRIFCRI-PRDIVTWNTLISSYAHCGHFAEALSLYDKMV 861
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
P+ T++ ++S C +LE G+ NY G + N+ + ALIDMY+KCG +
Sbjct: 862 LEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLE 921
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+RE+F ++ E+ V++W MI+G ++G+ A++ F Q+ E +PN +TFLAVL AC
Sbjct: 922 KSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACA 981
Query: 458 HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
H G +++G + D S P L HY+CM DLLGR G L+EA V SMPI D G
Sbjct: 982 HAGLVKEGKYLFGKMQD---YSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGG 1038
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMK 577
+WG LL +CKIH IE+G +A + + YV ++N Y+ G+W+ R +MK
Sbjct: 1039 VWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVMISNMYSSIGKWEEAEKARGIMK 1098
Query: 578 RNQVKKFPGQS 588
V+K G S
Sbjct: 1099 ERGVRKKTGWS 1109
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 244/529 (46%), Gaps = 27/529 (5%)
Query: 18 TINQWN----------SQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
++ +WN + E N A K L++ R+ E N AKA K+
Sbjct: 430 SVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKA-GKM 488
Query: 68 SDLIYSQMIHGHIVKSP----FVKCDRLDCAYKIFDEM---AVRDVASWNAMLVGFAQMG 120
++ M + +K C + D + +R+V W + G ++MG
Sbjct: 489 PLIVAEWMKKDKVEMDEETHRLIKETSKMCXVQRLDPLLCICIRNVEFWRRHMNGESKMG 548
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L + + G + +F T+ G QA + L + +H + G+D V +
Sbjct: 549 L--ECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQS 606
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ +S Y+KC + + A FC + + ++SW SM++ + + ++ + M+ +G
Sbjct: 607 SLLSMYSKCGNPEEAHRSFCEVLN--KDIISWTSMISAYSRMGWATECIDMFWEMLVSGI 664
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D + +LSSF + + + H I + LD V N L+SMY K G + A
Sbjct: 665 YPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEK 724
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
F + ++ +W M+SGY + G + + + LF M+ G D +++S++S C Q GA
Sbjct: 725 FFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGA 784
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L + Y + +NV V N+LIDMY K G++ AR +F +P I V+W T+I+
Sbjct: 785 THLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPRDI-VTWNTLISS 843
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A G F EAL L+ +++ DL+PN T + VL AC+H LE+G + Y + G +
Sbjct: 844 YAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVH--NYINGG-KF 900
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
L + + D+ + G+L+++ + SM + D W ++ +H
Sbjct: 901 EFNLSIATALIDMYAKCGQLEKSREIFNSMH-ERDVITWNVMISGYGMH 948
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 165/392 (42%), Gaps = 58/392 (14%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS------------- 83
K + LFR+M+ IE ++ + + +C++L ++ IH +++K+
Sbjct: 752 KCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLI 811
Query: 84 -PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ K L A +IF + RD+ +WN ++ +A G L L+ M L ++ +
Sbjct: 812 DMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSA 870
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T++ + A H L + VH++ + ++S+ I YAKC L+ + +F +
Sbjct: 871 TLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSM 930
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R V++WN M++G ++ ++ M + + + T +++LS+ + +
Sbjct: 931 HE--RDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKE 988
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ + +G D SV L + M+ +
Sbjct: 989 GKYL------FGKMQDYSVAPNL-------------------------KHYACMVDLLGR 1017
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN--- 379
G+L EA L +M + PD +++S C +E+G +A ++++
Sbjct: 1018 SGNLQEAEALVLSMPIS---PDGGVWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYY 1074
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
VM+ N MYS G +A + + E+ V
Sbjct: 1075 VMISN----MYSSIGKWEEAEKARGIMKERGV 1102
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
RI R I WN+ I + + L L+ +M D++PN+ T + AC+ L+ L
Sbjct: 829 RIPRD--IVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLE 886
Query: 72 YSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFA 117
+ +H +I F KC +L+ + +IF+ M RDV +WN M+ G+
Sbjct: 887 EGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYG 946
Query: 118 QMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G + + F M + + +T + + A HA
Sbjct: 947 MHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHA 983
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 260/509 (51%), Gaps = 25/509 (4%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+ A +K+L+ +++HS + D + N+ I Y KC + A VF GI R
Sbjct: 68 IITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTR- 126
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
VVSW ++ G D ++L M+ FR T S L + G +
Sbjct: 127 -DVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQM 185
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H+ + Y D DV V + L+ MY++C +D A +FD + + VSW A+I+G+A+KGD
Sbjct: 186 HALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDG 245
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+ L F M+ G T S+ S + GALE G+W + G K V N +
Sbjct: 246 ETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTI 305
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ MY+K GS+ DAR++F + ++ +V+W TM+ A G EA+ F ++ + ++ N+
Sbjct: 306 LGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQ 365
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEAL 504
+TFL+VL AC+H G +++G QY D YN PE+DHY DLLGR G LKEAL
Sbjct: 366 ITFLSVLTACSHGGLVKEG-----KQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEAL 420
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
FV MP++ A +WG LL AC++H N +IG+Y A +F+L+P P V + N YA G
Sbjct: 421 IFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTG 480
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTY----------- 613
+WD A +R MMK VKK P S I F A+D H +SE Y
Sbjct: 481 QWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIK 540
Query: 614 -----PVLDCLALHSREEAYSSHLKWIPE 637
P D + LH +E+ + L++ E
Sbjct: 541 KAGYVPNTDYVLLHIKEQERETKLQYHSE 569
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 179/391 (45%), Gaps = 17/391 (4%)
Query: 49 DIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCA 94
++ P + I ACA+ +L ++ IH H+ +S + KC + A
Sbjct: 57 ELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDA 116
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+FD + RDV SW ++ G+AQ L L +M + T +AA
Sbjct: 117 RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGAC 176
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
+ + +H+ + +D DV V + + YA+C + MA VF ++ + VSWN+
Sbjct: 177 GGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDS--KNEVSWNA 234
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
++AG + +L + M NGF T S+ S+ AL QGR VH+H I G
Sbjct: 235 LIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSG 294
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
L V NT++ MY+K G + AR +FD + R V+W M++ +AQ G EA+ F
Sbjct: 295 QKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFE 354
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
+ G + +T LS+++ C G ++ GK + + ++ + + +D+ + G
Sbjct: 355 EIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAG 414
Query: 395 SIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+ +A + +P E W ++ C ++
Sbjct: 415 LLKEALIFVFKMPMEPTAAVWGALLGACRMH 445
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 340 GEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
GEL P S+I+ C QS L + ++ L + + N+LI MY KCG++ D
Sbjct: 56 GELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSD 115
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ---A 455
AR +F +P + VVSWT +I G A N EAL L ++ RP+ TF + L+ A
Sbjct: 116 ARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGA 175
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIK 513
C G E+ A++ + YN + D Y S + D+ R ++ A+ + K
Sbjct: 176 CGGRGIGEQMHALA--------VKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSK 227
Query: 514 SDAGIWGTLLCA 525
++ W L+
Sbjct: 228 NEVS-WNALIAG 238
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 124/311 (39%), Gaps = 17/311 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W I + + L L M + P+ TF KA + +H V
Sbjct: 131 WTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAV 190
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + +C ++D A ++FD + ++ SWNA++ GFA+ G E L
Sbjct: 191 KYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLM 250
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M+ G A T + A L + VH+ I G V NT + YA
Sbjct: 251 KFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYA 310
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K + A VF +++ R +V+WN+M+ +++ + + G +L+ T
Sbjct: 311 KSGSMVDARKVFDRVDQ--RDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITF 368
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV-LFDGIC 306
+S+L++ + +G+ Y + ++ + + + + G + A + +F
Sbjct: 369 LSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPM 428
Query: 307 DRTRVSWTAMI 317
+ T W A++
Sbjct: 429 EPTAAVWGALL 439
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/560 (30%), Positives = 307/560 (54%), Gaps = 22/560 (3%)
Query: 73 SQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG-FLENVLRLFYN 131
S ++ G+ + + + A ++FDEM+ +D+ SWN++L G +Q G F + +F +
Sbjct: 132 SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRD 191
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M G++ D V+ + H L L + +H I G ++ + V N +S Y+KC
Sbjct: 192 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 251
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
L+ + VF + ER VVSW +M++ DD+++ + +M ++G + T V L+
Sbjct: 252 LEAVKSVFHQMSER--NVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLI 304
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
++ C E + +G +H I GF + SV N+ I++Y+K ++ A+ F+ I R +
Sbjct: 305 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 364
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG--QSGALELGKWFDN 369
SW AMISG+AQ G EAL++F + AA +P+ T S+++ + +++ G+
Sbjct: 365 SWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHA 423
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+ GL +V +AL+DMY+K G+I ++ ++F + +K WT++I+ + +G+F
Sbjct: 424 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 483
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDHY 487
++LFH++++ ++ P+ VTFL+VL AC G ++KG+ I + + YN P +HY
Sbjct: 484 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE----VYNLEPSHEHY 539
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SCM D+LGR G+LKEA + + +P + ++L +C++H N+++G VA +++P
Sbjct: 540 SCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKP 599
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT-----FTAE 602
+ YV+M N YA WD A IR M++ V K G S + + F++
Sbjct: 600 ELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSG 659
Query: 603 DRYHAESELTYPVLDCLALH 622
D+ H +S+ Y +++ + L
Sbjct: 660 DKSHPKSDEIYRMVEIIGLE 679
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 232/522 (44%), Gaps = 47/522 (9%)
Query: 53 NNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIF 98
+ +T KAC DL IHG S F K R D A IF
Sbjct: 2 DEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 59
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
+ + DV SWN +L GF + L M+ G+ D T + ++
Sbjct: 60 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 116
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
L + S + G+++D+ V N++I+ Y++ + A VF E + ++SWNS+++G
Sbjct: 117 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF--DEMSFKDMISWNSLLSG 174
Query: 219 CTYGDKFD-DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
+ F +++ +R MM G LD + S++++ L R +H I G++
Sbjct: 175 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 234
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
+ V N L+S YSKCG +++ + +F + +R VSWT MIS + D+A+ +F M
Sbjct: 235 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMR 289
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G P+ VT + +I+ + ++ G G V N+ I +Y+K ++
Sbjct: 290 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE 349
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
DA++ F + + ++SW MI+G A NG EAL +F + PN TF +VL A
Sbjct: 350 DAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNA-- 406
Query: 458 HTGFLEKGWAISIIQYD-------DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
F E IS+ Q G++ P + S + D+ ++G + E+ M
Sbjct: 407 -IAFAED---ISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEM 460
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
K+ +W +++ A H + E V K+ + AP
Sbjct: 461 SQKNQF-VWTSIISAYSSHGDFET---VMNLFHKMIKENVAP 498
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 207/427 (48%), Gaps = 35/427 (8%)
Query: 22 WNSQIREAVNKNE-AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH--- 77
WNS + + + +++FR M + +E ++++F + C +DL ++ IH
Sbjct: 168 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 227
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
G+I+ S + KC L+ +F +M+ R+V SW M+ ++ +
Sbjct: 228 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAV 282
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F NMR G+ + VT +GL A + + +H I G ++ SV N++I+ Y
Sbjct: 283 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 342
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY----RHMMYNGFRL 242
AK + L+ A+ F I R ++SWN+M++G ++L + M N +
Sbjct: 343 AKFEALEDAKKAFEDI--TFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEY-- 398
Query: 243 DVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
T S+L++ E ++ QG+ H+H + G + V + L+ MY+K G+ID +
Sbjct: 399 ---TFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEK 455
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+F+ + + + WT++IS Y+ GD + + LF M PDLVT LS+++ C + G
Sbjct: 456 VFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGM 515
Query: 361 LELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW-TTMI 418
++ G + F+ L+ + + ++DM + G + +A EL +P S +M+
Sbjct: 516 VDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSML 575
Query: 419 AGCALNG 425
C L+G
Sbjct: 576 GSCRLHG 582
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 228/401 (56%), Gaps = 2/401 (0%)
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
SL FY M+ + T S++ S AL GR++H H + GF DV V L+S
Sbjct: 95 SLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMS 154
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
Y KCG + +AR +FD + DR+ V+W +MISGY Q G EA+RLF M+ G P+ T
Sbjct: 155 FYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSAT 214
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+S++S C GA LG W YA GL NV++ +LI+MY++CG++ ARE+F ++
Sbjct: 215 FVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMK 274
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
E+ VV+WT MI+G NG +A++LFH++ L PN +TF+AVL AC H G + +G
Sbjct: 275 ERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRR 334
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ ++ + PE++H+ C+ D+LGR G L EA +F++ + + IW +L ACK
Sbjct: 335 VFESMREEYRLV--PEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACK 392
Query: 528 IHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQ 587
+H N +G VA EP + A YV ++N YAL GR D V +R M R +KK G
Sbjct: 393 MHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGY 452
Query: 588 SLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
S ++ KT F+ D+ H E+ Y LD L RE Y
Sbjct: 453 STIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGY 493
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 188/402 (46%), Gaps = 24/402 (5%)
Query: 44 QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDR--------LDCA- 94
++KQ+ P++ + + +A +L L +H H++ S + C R L CA
Sbjct: 2 EIKQHHKHPHSPAYNLLLQAGPRLKLL---HQVHAHVIVSGY-GCSRFLLTKLLNLACAA 57
Query: 95 ------YKIFDEMAVRDVASWNAMLVGFAQM-GFLENVLRLFYNMRLVGIQADFVTVMGL 147
+IF + D + +++ ++ F L + M L + T +
Sbjct: 58 GSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSV 117
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
++ L + +H + G +DV V +S Y KC L A VF + R R
Sbjct: 118 IKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKM--RDR 175
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
+VV+WNSM++G +++ + M G + T VS+LS+ A + G VH
Sbjct: 176 SVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVH 235
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ + G DL+V + +LI+MY++CG++ AR +FD + +R V+WTAMISGY G
Sbjct: 236 EYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGS 295
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYACSGGLKDNVMVCNAL 386
+A+ LF M G LP+ +T ++++S C +G + G+ F++ L V L
Sbjct: 296 QAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCL 355
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEF 427
+DM + G + +A + E+ + WT M+ C ++ F
Sbjct: 356 VDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNF 397
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 145/296 (48%), Gaps = 18/296 (6%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF------------ 85
+L + +M +++ P+N TF + K+CA L L + ++IHGH++ + F
Sbjct: 95 SLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMS 154
Query: 86 --VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
KC L A K+FD+M R V +WN+M+ G+ Q GF + +RLF M+ +G++ + T
Sbjct: 155 FYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSAT 214
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + A H L VH + + G+D +V + + I+ Y +C ++ A VF ++
Sbjct: 215 FVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMK 274
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
E R VV+W +M++G ++ + M NG + T V++LS+ + +G
Sbjct: 275 E--RNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEG 332
Query: 264 RLV-HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMI 317
R V S Y +V L+ M + G +D A I + + WTAM+
Sbjct: 333 RRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAML 388
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R ++ WNS I A + + LF +MK+ +EPN+ TF + ACA L I
Sbjct: 173 RDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGC 232
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H + V + + +C + A ++FD M R+V +W AM+ G+ G
Sbjct: 233 WVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNG 292
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ + LF+ MR G+ + +T + + A HA
Sbjct: 293 YGSQAVELFHEMRRNGLLPNSITFVAVLSACAHA 326
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 235/406 (57%), Gaps = 12/406 (2%)
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+YR M+ + T S++ S AL G+ VH H + GF LD V L++ YS
Sbjct: 94 YYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYS 153
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
KCGD+++AR +FD + +++ V+W +++SG+ Q G ++A+R+F+ M +G PD T +S
Sbjct: 154 KCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVS 213
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++S C Q+GA+ LG W Y S GL NV + ALI++YS+CG +G ARE+F + E
Sbjct: 214 LLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETN 273
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLR--PNRVTFLAVLQACTHTGFLEKGWAI 468
V +WT MI+ +G +A+DLF++ ME D PN VTF+AVL AC H G +E G ++
Sbjct: 274 VAAWTAMISAYGTHGYGKQAVDLFNK-MEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSV 332
Query: 469 SIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA---GIWGTLL 523
Y SY P ++H+ C+ D+LGR G L EA F+Q + +A +W +L
Sbjct: 333 ----YKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAML 388
Query: 524 CACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
ACK+H N ++G +A L LEP + +V ++N YAL G+ D V++IR M RN ++K
Sbjct: 389 GACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLRK 448
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYS 629
G S+ + KT F+ D H E+ Y L+ L +E Y+
Sbjct: 449 QVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYA 494
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 197/416 (47%), Gaps = 33/416 (7%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV-------KSPFVKCDRLDCAYK------ 96
+ N+ + I +A ++ L Q +H H++ +S K L C+ +
Sbjct: 5 VAANSAAYEAIVRAGPRVKQL---QQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTH 61
Query: 97 -IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
+F + + D +N+++ +++ + + + M + T + ++
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L + K VH + G D V ++ Y+KC D++ A VF + E+ +VV+WNS+
Sbjct: 122 ALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEK--SVVAWNSL 179
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
V+G +D++ + M +GF D T VSLLS+ A+ G VH + + G
Sbjct: 180 VSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGL 239
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D++V + LI++YS+CGD+ AR +FD + + +WTAMIS Y G +A+ LF
Sbjct: 240 DVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNK 299
Query: 336 ME-AAGELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDM 389
ME G +P+ VT ++++S C +G +E G+ ++Y G++ +V + +DM
Sbjct: 300 MEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCI----VDM 355
Query: 390 YSKCGSIGDARELFYALPEKIVVS----WTTMIAGCALNGEFVEALDLFHQLMELD 441
+ G + +A L + WT M+ C ++ + +++ +L+ L+
Sbjct: 356 LGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE 411
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 34/302 (11%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VK 87
+R+M +++ P+N TF + K+CA LS L + +H H V S F K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C ++ A ++FD M + V +WN+++ GF Q G E+ +R+FY MR G + D T + L
Sbjct: 155 CGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSL 214
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
A +SL VH + + G+D +V + I+ Y++C D+ A VF ++E
Sbjct: 215 LSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKE--T 272
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEA------- 259
V +W +M++ +++ + M + G + T V++LS+ C A
Sbjct: 273 NVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSA--CAHAGLVEDGR 330
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL---FDGICDRTRVS-WTA 315
V R+ S+ + G + V +++ M + G +D A D + T + WTA
Sbjct: 331 SVYKRMTESYRLIPGVEHHVCIVD----MLGRAGFLDEAYRFIQQLDATGNATAPALWTA 386
Query: 316 MI 317
M+
Sbjct: 387 ML 388
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 304/628 (48%), Gaps = 72/628 (11%)
Query: 5 SLPPRLNRIYRSSTINQ---------------WNSQIREAVNKNEAHKTLLLFRQMKQND 49
SL +++ + R+ IN+ WN I V + E K LF +M D
Sbjct: 59 SLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRD 118
Query: 50 IEPNNLTF--------PFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEM 101
I NL F+ +A + + + + + S + K +D A ++F+EM
Sbjct: 119 IVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEM 178
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
R+V SWNAM+ G+ G +E + F M + V GL Q + K + +
Sbjct: 179 PERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQ---NDKLVEAER 235
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--------CGIEERLRTVVSWN 213
+ +G ++G V NT I+ Y + A +F CG R V+SWN
Sbjct: 236 ILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRR--NVISWN 293
Query: 214 SM----------VAGCTYGDKFDDSLNFYRHMMYNGFR--LDVTTVVSLLSSFVCPEALV 261
SM V+ DK + F + M +G+ LD+ +L S P+ L
Sbjct: 294 SMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLS 353
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
N +IS +S+ G + A LF I +++ VSW +MISGY
Sbjct: 354 W--------------------NMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYE 393
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ D A+ +F M+ G+ PD T+ S++S C L LG + D +
Sbjct: 394 KNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIAD-LP 452
Query: 382 VCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ N+L+ MYS+CG+I +AR +F + ++ V+SW MI G A +G EAL LF + +
Sbjct: 453 INNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQC 512
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
+++P+ +TF++VL AC H G +E+G + GI P+++HY+ + D++GR G+L
Sbjct: 513 NVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIK--PQVEHYAALVDIIGRHGQL 570
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
+EA+ + SMP + D +WG LL ACK+H N+E+ A L KL+P S+APYV + N Y
Sbjct: 571 EEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMY 630
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQS 588
A GRWD A +RTMM++N V+K G S
Sbjct: 631 ADVGRWDDAAEMRTMMEKNNVQKDAGYS 658
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 252/444 (56%), Gaps = 7/444 (1%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N I+ Y+K D++ A +F + R T SWNSM+A +G +F ++L + M+ G
Sbjct: 244 NCLITGYSKSGDVEEARRLFDSMPRR--TSASWNSMIACYAHGGEFREALTLFDQMLREG 301
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSA 298
+ T+ ++ S L GR + DL +++T L+ MY KC ID A
Sbjct: 302 ASPNAITITTVFSICAKTGDLDTGR--RARAWIREEDLQNVIVHTALMEMYVKCRAIDEA 359
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
R FD + R V+W+ MI+GY+Q G E+L LF M+A P+ VT++ ++S C Q
Sbjct: 360 RHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQL 419
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
G+ ELG+ NY S L + +ALIDMY+KCG + AR +F + +K+VV+W +MI
Sbjct: 420 GSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMI 479
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI 478
G ALNG +A+ L+ +++ ++PN VTF+A+L ACTH G ++KG I+ + K
Sbjct: 480 RGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKG--IAFFEEMKKKQ 537
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
+P+++H +C+ DLL + G+L EA F+ M ++ +A IW TLL AC+ H ++E+ +
Sbjct: 538 HVSPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLA 597
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L LEP++++ YV ++N YA G W V IR +M+ ++K S ++G+
Sbjct: 598 AGKLVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHR 657
Query: 599 FTAEDRYHAESELTYPVLDCLALH 622
F +D YH S Y V+D L L
Sbjct: 658 FLVQDTYHPRSAEIYNVVDGLGLQ 681
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 114/191 (59%), Gaps = 1/191 (0%)
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
D +N LI+ YSK GD++ AR LFD + RT SW +MI+ YA G+ EAL LF M
Sbjct: 239 DPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQML 298
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G P+ +T+ ++ S C ++G L+ G+ + L+ NV+V AL++MY KC +I
Sbjct: 299 REGASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAID 357
Query: 398 DARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
+AR F +P + VV+W+TMIAG + NG E+L+LF ++ + +PN VT + VL AC
Sbjct: 358 EARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACA 417
Query: 458 HTGFLEKGWAI 468
G E G I
Sbjct: 418 QLGSDELGEQI 428
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 7/371 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K ++ A ++FD M R ASWN+M+ +A G L LF M G + +T+
Sbjct: 250 YSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAITI 309
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ L + ++ I +V V + Y KC + A F +
Sbjct: 310 TTVFSICAKTGDLDTGRRARAW-IREEDLQNVIVHTALMEMYVKCRAIDEARHEFDRMPR 368
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
R VV+W++M+AG + + +SL + M + + T+V +LS+ + G
Sbjct: 369 --RDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGE 426
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+ ++ L + + LI MY+KCG + AR +F+ + + V+W +MI G A G
Sbjct: 427 QIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNG 486
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVC 383
++A+ L+ M G P+ VT +++++ C +G ++ G +F+ + V C
Sbjct: 487 FAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHC 546
Query: 384 NALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
++D+ K G + +A + + E V W+T+++ C + + A +L+ L+
Sbjct: 547 ACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALE- 605
Query: 443 RPNRVTFLAVL 453
PN + +L
Sbjct: 606 -PNNSSIYVLL 615
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 165/403 (40%), Gaps = 59/403 (14%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL------- 70
T WNS I + E + L LF QM + PN +T + CAK DL
Sbjct: 270 TSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRAR 329
Query: 71 --IYSQMIHGHIVKSP----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
I + + IV + +VKC +D A FD M RDV +W+ M+ G++Q G
Sbjct: 330 AWIREEDLQNVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHE 389
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L LF M+ + + VT++G+ A L + + ++ + + + I
Sbjct: 390 SLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALID 449
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC + A VF +E+++ VV+WNSM+ G +D++ YR M+ +G + +
Sbjct: 450 MYTKCGHVARARSVFNRMEQKV--VVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNE 507
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFD 303
T V+LL++ H G D ++ + ++ + D
Sbjct: 508 VTFVALLTACT----------------HAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVD 551
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+C + G L EA + ME P+ V +++S C +EL
Sbjct: 552 LLC---------------KSGRLWEAYKFICDMEVE---PNAVIWSTLLSACRAHADVEL 593
Query: 364 GKWFDNYACSGGL----KDNVMVCNALIDMYSKCGSIGDAREL 402
K +G L +N + L ++Y+ G GD RE+
Sbjct: 594 AKL-----AAGKLVALEPNNSSIYVLLSNIYADAGLWGDVREI 631
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 232/430 (53%), Gaps = 33/430 (7%)
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
+N+++ GC+ + ++S ++Y + G D T L+ + E G H I
Sbjct: 85 YNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAI 144
Query: 272 HYGFDLDVSVINTLISMYS-------------------------------KCGDIDSARV 300
+GF+ D V N+L+ MY+ +CGD SAR
Sbjct: 145 KHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARE 204
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
LFD + +R V+W+ MISGYA+ ++A+ F A++A G + + ++ +IS C GA
Sbjct: 205 LFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGA 264
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L +G+ Y L N+++ A++DMY++CG++ A +F LPEK V+ WT +IAG
Sbjct: 265 LAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAG 324
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
A++G +AL F ++ + P +TF AVL AC+H G +E+G I D G+
Sbjct: 325 LAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVE- 383
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P L+HY CM DLLGR GKL++A FV MP+K +A IW LL AC+IH N+E+GE V
Sbjct: 384 -PRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGK 442
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L +++P + YV ++N YA +W V +R MMK V+K PG SL I+GK FT
Sbjct: 443 ILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFT 502
Query: 601 AEDRYHAESE 610
D+ H E E
Sbjct: 503 IGDKTHPEIE 512
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/486 (21%), Positives = 203/486 (41%), Gaps = 80/486 (16%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ IR + + + + + P+N+T PF+ KACA+L + HG
Sbjct: 85 YNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHG--- 141
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
A+ GF Q +++N L Y
Sbjct: 142 ----------------------------QAIKHGFEQDFYVQNSLVHMY----------- 162
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
+G AA S+ + + F DV I+ Y +C D K A +F
Sbjct: 163 -ASVGDINAA-----RSVFQRMCRF--------DVVSWTCMIAGYHRCGDAKSARELFDR 208
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ ER +V+W++M++G + F+ ++ + + G + T +V ++SS AL
Sbjct: 209 MPER--NLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALA 266
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G H + + L++ + ++ MY++CG+++ A ++F+ + ++ + WTA+I+G A
Sbjct: 267 MGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLA 326
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNV 380
G ++AL F M G +P +T ++++ C +G +E G + F++ G++ +
Sbjct: 327 MHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRL 386
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN-----GEFVEALDLF 434
++D+ + G + A + +P K W ++ C ++ GE V + L
Sbjct: 387 EHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLE 446
Query: 435 HQ---------LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK------GIS 479
Q L + R N+ + V++ + K S+I+ D K G
Sbjct: 447 MQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDK 506
Query: 480 YNPELD 485
+PE++
Sbjct: 507 THPEIE 512
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 294/603 (48%), Gaps = 22/603 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ + + LF M I P+ T+ I CA L + +H I+
Sbjct: 286 WNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAII 345
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F K L A K F+ M RD SWNA++VG+ Q
Sbjct: 346 KKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFS 405
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M L GI D V++ + A + K L + H + +G++ ++ ++ I Y+
Sbjct: 406 LFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYS 465
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D+K A + + ER +VVS N+++AG + +S+N M G + T
Sbjct: 466 KCGDIKDAHKTYSSMPER--SVVSVNALIAGYALKNT-KESINLLHEMQILGLKPSEITF 522
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT-LISMYSKCGDIDSARVLFDGIC 306
SL+ ++ G +H + G + T L+ MY + A +LF
Sbjct: 523 ASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFS 582
Query: 307 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ V WTA+ISG+ Q D AL L+ M PD T ++++ C +L G+
Sbjct: 583 SLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGR 642
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALN 424
+ G + + +AL+DMY+KCG + + ++F L +K V+SW +MI G A N
Sbjct: 643 EIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKN 702
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G AL +F ++ + + P+ VTFL VL AC+H G++ +G I + + GI P +
Sbjct: 703 GYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGI--EPRV 760
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
DHY+CM DLLGR G LKEA +F+ + ++ +A IW LL AC+IH + + G+ A L +
Sbjct: 761 DHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIE 820
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP S++PYV ++N YA G WD ++R M + ++K PG S + +T F A D
Sbjct: 821 LEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDI 880
Query: 605 YHA 607
H+
Sbjct: 881 SHS 883
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 231/514 (44%), Gaps = 60/514 (11%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ QWN ++ + + + L + + P+ TF ACAKL +L + +H
Sbjct: 13 VRQWNWRV-QGTKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDV--ASWNAMLVGFAQMGFL 122
++KS + KC+ L CA IF + SW A++ G+ Q G
Sbjct: 72 CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L +F MR + Q A+ V+V N +
Sbjct: 132 HEALHIFDKMRNSAVP---------DQVAL-----------------------VTVLNAY 159
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
IS K DD A +F + +R VV+WN M++G ++++L F+ M +G +
Sbjct: 160 IS-LGKLDD---ACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKS 215
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+T+ S+LS+ AL G LVH+H I GF+ + V ++LI+MY KC D AR +F
Sbjct: 216 SRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVF 275
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D I + + W AM+ Y+Q G L + LF M + G PD T S++S C LE
Sbjct: 276 DAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLE 335
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
+G+ + N+ V NALIDMY+K G++ +A + F + + +SW +I G
Sbjct: 336 VGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYV 395
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
A LF +++ + P+ V+ ++L AC + LE G Q+ +
Sbjct: 396 QEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQ-----QFHCLSVKLGL 450
Query: 483 ELDHY--SCMADLLGRKGKLKEALDFVQSMPIKS 514
E + + S + D+ + G +K+A SMP +S
Sbjct: 451 ETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERS 484
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 214/437 (48%), Gaps = 27/437 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V H+ L +F +M+ N P+ + + A
Sbjct: 118 WTALISGYVQAGLPHEALHIFDKMR-NSAVPDQVALVTVLNA------------------ 158
Query: 82 KSPFVKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
++ +LD A ++F +M + R+V +WN M+ G A+ E L F+ M G+++
Sbjct: 159 ---YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKS 215
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
T+ + A L+ VH+ I G ++ + V ++ I+ Y KC A VF
Sbjct: 216 SRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVF 275
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
I ++ ++ WN+M+ + + + + M+ G D T S+LS+ C E
Sbjct: 276 DAISQK--NMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEY 333
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
L GR +HS I F ++ V N LI MY+K G + A F+ + R +SW A+I G
Sbjct: 334 LEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVG 393
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y Q+ A LF M G +PD V++ S++S CG LE G+ F + GL+ N
Sbjct: 394 YVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETN 453
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ ++LIDMYSKCG I DA + + ++PE+ VVS +IAG AL E+++L H++
Sbjct: 454 LFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNT-KESINLLHEMQI 512
Query: 440 LDLRPNRVTFLAVLQAC 456
L L+P+ +TF +++ C
Sbjct: 513 LGLKPSEITFASLIDVC 529
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 241/518 (46%), Gaps = 22/518 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I + L F QM ++ ++ + T + A A L+ L + ++H H +
Sbjct: 185 WNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAI 244
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F KC D A ++FD ++ +++ WNAML ++Q GFL NV+
Sbjct: 245 KQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVME 304
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M GI D T + ++L + + +HS I +++ V N I YA
Sbjct: 305 LFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYA 364
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K LK A F + R +SWN+++ G + + + +R M+ +G D ++
Sbjct: 365 KAGALKEAGKHFEHMT--YRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSL 422
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ + L G+ H + G + ++ ++LI MYSKCGDI A + + +
Sbjct: 423 ASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPE 482
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R+ VS A+I+GYA K + E++ L M+ G P +T S+I C S + LG
Sbjct: 483 RSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQI 541
Query: 368 DNYACSGGLK-DNVMVCNALIDMYSKCGSIGDARELFYALPE-KIVVSWTTMIAGCALNG 425
GL + + +L+ MY + DA LF K +V WT +I+G N
Sbjct: 542 HCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNE 601
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
AL+L+ ++ + ++ P++ TF+ VLQAC L G I + + ++ +
Sbjct: 602 CSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFH---TGFDLDEL 658
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
S + D+ + G +K ++ + + K D W +++
Sbjct: 659 TSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMI 696
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+I W + I + + L L+R+M+ N+I P+ TF + +ACA LS L + IH
Sbjct: 586 SIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIH 645
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQMGFL 122
I + F KC + + ++F+E+A +DV SWN+M+VGFA+ G+
Sbjct: 646 SLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYA 705
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ L++F M I D VT +G+ A HA
Sbjct: 706 KCALKVFDEMTQSCITPDDVTFLGVLTACSHA 737
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 278/518 (53%), Gaps = 8/518 (1%)
Query: 117 AQMGFLENVLRLFYNMRLVGIQ-ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
A+ + L F+ M G + F+ L A + L +H+ I G + +
Sbjct: 77 AKHANVREALESFWRMNTSGTKPTKFILCTALNSCA-KLLNWGLGVQIHARIIQTGFEDN 135
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ + + + YAKCD + A+ VF G+E+ + VSW S+++G + + +++ F++ M
Sbjct: 136 LFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQ--VSWTSIISGFSKNGRGKEAILFFKEM 193
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALV-QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ + + + T VS++S+ E + Q L+H+H + GF + V++ LI YSKCG
Sbjct: 194 LGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGR 253
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
ID A +LF +R + + +MISGY+Q +EAL+LF M G P T+ S+++
Sbjct: 254 IDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNA 313
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
CG L+ G+ + G + NV V +AL+DMYSKCGSI +AR +F EK V W
Sbjct: 314 CGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLW 373
Query: 415 TTMIAGCALNGEFVEALDLFHQLM-ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
T+MI G A +G E L LF +L+ E P+ + F AVL AC H GFL+KG
Sbjct: 374 TSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMR 433
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
D G+ P+LD Y+C+ DL R G L++A + ++++P + ++ +WG+ L +CK++ E
Sbjct: 434 RDYGLV--PDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAE 491
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+G A LFK+EP S APYV MA+ YA G W V IR +MK+ ++K G S ++
Sbjct: 492 LGREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVD 551
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
+ F D H S L+ L L +E Y+
Sbjct: 552 KRVHVFLVADASHPRSRDICVELERLNLEMKEVGYTPQ 589
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 199/419 (47%), Gaps = 21/419 (5%)
Query: 26 IREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF 85
IR A + N + L F +M + +P +CAKL + IH I+++ F
Sbjct: 74 IRPAKHAN-VREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGF 132
Query: 86 --------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
KCD + A ++FD M D SW +++ GF++ G + + F
Sbjct: 133 EDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKE 192
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD 190
M I+ + VT + + A + + +H+ + +G V + I Y+KC
Sbjct: 193 MLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCG 252
Query: 191 DLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSL 250
+ A L+F E R + +NSM++G + +++L + M NG T+ S+
Sbjct: 253 RIDQAVLLFGTTIE--RDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSI 310
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L++ L QGR VHS G + +V V++ L+ MYSKCG ID AR +FD ++
Sbjct: 311 LNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNT 370
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELG-KWFD 368
V WT+MI+GYAQ G E L LF + G PD + ++++ C +G L+ G +F+
Sbjct: 371 VLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFN 430
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGE 426
GL ++ L+D+Y + G + A+EL A+P E V W + ++ C L GE
Sbjct: 431 QMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGE 489
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 147/344 (42%), Gaps = 25/344 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ--MIHGH 79
W S I + +L F++M + I+PN +T+ + AC L + I+ Q ++H H
Sbjct: 170 WTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISACTGL-ETIFDQCALLHAH 228
Query: 80 IVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+VK F KC R+D A +F RD +N+M+ G++Q F E
Sbjct: 229 VVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEA 288
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
L+LF MR G+ T+ + A L + VHS +G +++V V + +
Sbjct: 289 LKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDM 348
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN-FYRHMMYNGFRLDV 244
Y+KC + A VF E + V W SM+ G + + L F R + GF D
Sbjct: 349 YSKCGSIDEARCVFDQAVE--KNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDH 406
Query: 245 TTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
++L++ L +G + YG D+ L+ +Y + G + A+ L +
Sbjct: 407 ICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELME 466
Query: 304 GI-CDRTRVSWTAMISGYAQKGDLD---EALRLFFAMEAAGELP 343
I C+ V W + +S G+ + EA F ME P
Sbjct: 467 AIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAP 510
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 267/523 (51%), Gaps = 38/523 (7%)
Query: 128 LFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LFY +R VG + D + + + +A L +H I D V ++ Y
Sbjct: 97 LFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMY 156
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVT 245
A C + A VF E R VV+WN+M+ C +G D++ + M + D
Sbjct: 157 ASCGRINYARNVF--DEMSHRDVVTWNTMIERYCRFG-LVDEAFKLFEEMKDSNVMPDEM 213
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMY---------------- 289
+ +++S+ + R ++ I +D ++ L++MY
Sbjct: 214 ILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
Query: 290 ---------------SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
SKCG +D A+V+FD + V WT MIS Y + EALR+F
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M +G PD+V++ S+IS C G L+ KW + GL+ + + NALI+MY+KCG
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ R++F +P + VVSW++MI +++GE +AL LF ++ + ++ PN VTF+ VL
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
C+H+G +E+G I D+ I+ P+L+HY CM DL GR L+EAL+ ++SMP+ S
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNIT--PKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
+ IWG+L+ AC+IH +E+G++ A + +LEP V M+N YA RW+ V NIR
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRR 571
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
+M+ V K G S NGK+ F D+ H +S Y LD
Sbjct: 572 VMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 614
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 229/476 (48%), Gaps = 61/476 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N +R+ +E T+L +++++ + +F I KA +K+S L +HG
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 82 K-----SPFVK---------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K PFV+ C R++ A +FDEM+ RDV +WN M+ + + G ++ +
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD------------ 175
LF M+ + D + + + A ++ ++++ F I V D
Sbjct: 199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA 258
Query: 176 --------------VSVCNTWISS-----YAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
+SV N ++S+ Y+KC L A+++F E+ + +V W +M+
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK--KDLVCWTTMI 316
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY-GF 275
+ D ++L + M +G + DV ++ S++S+ L + + VHS IH G
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS-CIHVNGL 375
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+ ++S+ N LI+MY+KCG +D+ R +F+ + R VSW++MI+ + G+ +AL LF
Sbjct: 376 ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFAR 435
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVCNALIDMY 390
M+ P+ VT + ++ GC SG +E GK D Y + L+ ++D++
Sbjct: 436 MKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHY----GCMVDLF 491
Query: 391 SKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
+ + +A E+ ++P VV W ++++ C ++GE L F L+L P+
Sbjct: 492 GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL--ELGKFAAKRILELEPD 545
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 168/364 (46%), Gaps = 38/364 (10%)
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
VF I ++V +N + + + ++ FY+ + + G RLD + + +L +
Sbjct: 66 VFSSIPSPPESIV-FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKV 124
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
AL +G +H D V + MY+ CG I+ AR +FD + R V+W MI
Sbjct: 125 SALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMI 184
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-----WFDN--- 369
Y + G +DEA +LF M+ + +PD + + +++S CG++G + + +N
Sbjct: 185 ERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR 244
Query: 370 ------------YACSGGLK-----------DNVMVCNALIDMYSKCGSIGDARELFYAL 406
YA +G + N+ V A++ YSKCG + DA+ +F
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG- 465
+K +V WTTMI+ + EAL +F ++ ++P+ V+ +V+ AC + G L+K
Sbjct: 305 EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK 364
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
W S I + EL + + ++ + G L D + MP + + W +++ A
Sbjct: 365 WVHSCIHVN----GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419
Query: 526 CKIH 529
+H
Sbjct: 420 LSMH 423
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 265/512 (51%), Gaps = 40/512 (7%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+T IH +L LK H F I G++ D +I + + L+ A VF +
Sbjct: 18 VTSLKIHGTNLKTLKQSHCFMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFT--HQPF 75
Query: 207 RTVVSWNSMVAGCTYGDKFDD---SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
N+M+ + D+ + ++ YR + D T +L V + G
Sbjct: 76 PNTYLHNTMIRALSLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFG 135
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD-------------------- 303
R VH + +GFD V V+ LI MYS CG + AR +FD
Sbjct: 136 RQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKV 195
Query: 304 GICDRTR-------------VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
G D R VSWT +ISGYA+ G EA+ +F M PD VT+L+
Sbjct: 196 GEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLA 255
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++S C G+LELG+ +Y G+ V + NA+IDMY+K G+I A E+F ++ E+
Sbjct: 256 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERN 315
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
VV+WTT+I G A +G EAL +F ++++ ++PN VTF+A+L AC+H G+++ G
Sbjct: 316 VVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFN 375
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
GI NP ++HY CM DLLGR GKL+EA + ++SMP +S+A IWG+LL A +H
Sbjct: 376 SMRSKYGI--NPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHH 433
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
+I++GE Y L KLEP+++ Y+ +AN Y+ GRWD +R MMK VKK G+S
Sbjct: 434 DIDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSI 493
Query: 591 HINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
+ + F + D H + E + +L + L
Sbjct: 494 EVENRVYKFISGDLSHPQVEKIHELLQEMDLQ 525
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 155/368 (42%), Gaps = 58/368 (15%)
Query: 23 NSQIR--EAVNKNEAHK-TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG- 78
N+ IR V++ AH + ++R+ +P+ TFPF+ K ++SD+ + + +HG
Sbjct: 82 NTMIRALSLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQ 141
Query: 79 ----------HIVK---SPFVKCDRLDCAYKIFDEMAVRDVASWNAML------------ 113
H+V + C L A K+FDEM VRDV WNA+L
Sbjct: 142 AVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEA 201
Query: 114 ---------------------VGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAI 152
G+A+ G + +F M + + D VT++ + A
Sbjct: 202 RGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACA 261
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L L + + S+ H G++ VS+ N I YAK ++ A VF + E R VV+W
Sbjct: 262 DLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNE--RNVVTW 319
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL---VQGRLVHSH 269
+++ G ++L + M+ G + + T +++LS+ C + R +S
Sbjct: 320 TTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSA--CSHVGWVDLGNRFFNSM 377
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDE 328
YG + ++ +I + + G + A + + + + W ++++ D+D
Sbjct: 378 RSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDV 437
Query: 329 ALRLFFAM 336
R + +
Sbjct: 438 GERALYQL 445
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 86/220 (39%), Gaps = 16/220 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI- 80
W I A + + +F++M +++P+ +T + ACA L L + I ++
Sbjct: 218 WTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 81 -------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
V + K + A ++F+ + R+V +W ++ G A G L
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLATHGHGAEALV 337
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL-LKSVHSFGIHIGVDADVSVCNTWISSY 186
+F M G++ + VT + + A H + L + +S G++ ++ I
Sbjct: 338 MFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLL 397
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ L+ AE V + + W S++A D
Sbjct: 398 GRAGKLREAEEVIKSMPFESNAAI-WGSLLAASNVHHDID 436
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/543 (30%), Positives = 280/543 (51%), Gaps = 7/543 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM--RLVGIQADFVTVMGLTQAA 151
A +FDEM R+ SW AM+ G+A + LF M + +FV L+ +
Sbjct: 172 AQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAIS 231
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+ L + VH + G+ VSV N+ ++ YAK + A VF +ER ++
Sbjct: 232 VPLG-LPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKER--NSIT 288
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
W++M+ G + + ++ + M GF T+V +L++ L++G+ H +
Sbjct: 289 WSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMV 348
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
GF++ V V + L+ MY+KCG I A+ F+ + V WTAM++G+ Q G+ ++AL
Sbjct: 349 KLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALM 408
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
L+ M+ G P+ +T+ S++ C ALE GK G V +AL MYS
Sbjct: 409 LYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYS 468
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCG++ D +F +P + V++W ++I+G + NG +A++LF ++ P+ VTF+
Sbjct: 469 KCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFIN 528
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
VL AC+H G +++GW D G++ P LDHY+CM D+L R G L EA DF++S+
Sbjct: 529 VLCACSHMGLVDRGWTYFRSMIKDYGLT--PRLDHYACMVDILSRAGMLSEAKDFIESIT 586
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
I +W +L AC+ + ++G Y L L +A Y+ ++N YA +W+ V
Sbjct: 587 IDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVER 646
Query: 572 IRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
+R +MK V K PG S +N + F ++ H ++E+ L L H ++E Y+
Sbjct: 647 VRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELRRLGKHMKDEGYNPA 706
Query: 632 LKW 634
K+
Sbjct: 707 SKY 709
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 215/439 (48%), Gaps = 14/439 (3%)
Query: 91 LDCAYKIFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
L A+ +F ++ A RDVASWN++L + L + + I +
Sbjct: 65 LPAAFAVFADIPAAARDVASWNSLLNPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAF 124
Query: 149 QAAIHAKHLSLLKSVHSFGIHI-GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
AA A S VH+ + ++V V ++ Y K + A+LVF E R
Sbjct: 125 TAAARAHSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVF--DEMPHR 182
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLV 266
VSW +MVAG ++ +R M+ + ++LS+ P L G V
Sbjct: 183 NEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQV 242
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + G VSV N+L++MY+K G +D+A +F+ +R ++W+AMI+GY+Q G+
Sbjct: 243 HGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNA 302
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+ A+R+F M AAG P T++ +++ C G L GK G + V V +AL
Sbjct: 303 ESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSAL 362
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+KCG IGDA+E F E +V WT M+ G NGEF +AL L+ ++ + + PN
Sbjct: 363 VDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNT 422
Query: 447 VTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+T ++L+AC LE G + I+++ G + S ++ + + G L++ +
Sbjct: 423 LTITSLLRACAGLAALEPGKQLHTQILKF---GFGLGASVG--SALSTMYSKCGNLEDGM 477
Query: 505 DFVQSMPIKSDAGIWGTLL 523
+ MP + D W +++
Sbjct: 478 VVFRRMPHR-DVIAWNSII 495
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGD--IDSARVLFDGICDRTR--VSWTAMIS 318
G +H+ + G V N+LI+ YS + +A +F I R SW ++++
Sbjct: 31 GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90
Query: 319 GYAQKGDLDEALRLFFAMEAAGE-LPDLVTVLSMISGCGQSGALELGKWFDNYACS-GGL 376
+ L AL F +M ++ LP + + + ++ + G AC
Sbjct: 91 PLSHHRPL-AALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSA 149
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
NV V AL++MY K G I DA+ +F +P + VSW M+AG A EA +LF Q
Sbjct: 150 SSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQ 209
Query: 437 LM-ELDLRPNRVTFLAVLQACT 457
++ E L N AVL A +
Sbjct: 210 MLGECPLHKNEFVATAVLSAIS 231
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 232/409 (56%), Gaps = 2/409 (0%)
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+++ G + D ++ YR M G + T +L + L +G+ +HS +
Sbjct: 75 WNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIV 134
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
G D + ++N LI +Y+ CG +D A V+FD + + SW+ M+SGYAQ G EAL+
Sbjct: 135 KVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALK 194
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
LF M+A D T+ S++ CG GAL+LGKW +Y G+K +V++ AL+ MYS
Sbjct: 195 LFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYS 254
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
KCGS+ +A ++F + E+ V +W+TMIAG A++G +AL LF + PN VTF +
Sbjct: 255 KCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTS 314
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
VL AC+H+G +EKG I + + I+ P++ HY CM DL R G + A F+Q+MP
Sbjct: 315 VLSACSHSGLVEKGHQIFETMWTEYKIT--PQIKHYGCMVDLFCRAGMVGHAHKFIQTMP 372
Query: 512 IKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVAN 571
I+ + +W TLL ACK H ++GE+++ + KL+P S YV ++N YA GRW V
Sbjct: 373 IEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQ 432
Query: 572 IRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLA 620
+R++MK KK G S IN F D H E E Y +L +A
Sbjct: 433 VRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMA 481
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 194/397 (48%), Gaps = 21/397 (5%)
Query: 62 KACAKLSDL--IYSQMIHGHIVKSPFVKCDRLDC-----------AYKIFDEMAVRDVAS 108
K C ++ DL I + M+ ++ + F+ ++ A++IF ++
Sbjct: 15 KRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFM 74
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
WN ++ G++ + L+ +M L GI + T + +A L + +HS +
Sbjct: 75 WNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIV 134
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
+G+D + + N I YA C + A ++F + E SW++MV+G + ++
Sbjct: 135 KVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPE--PDSASWSTMVSGYAQNGQAVEA 192
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLI 286
L +R M D T+ S++ VC + AL G+ VHS+ G +DV + L+
Sbjct: 193 LKLFREMQAENVSSDAFTLASVVG--VCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALV 250
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MYSKCG +D+A +F G+ +R +W+ MI+GYA G ++AL+LF AM+ + +P+ V
Sbjct: 251 GMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCV 310
Query: 347 TVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T S++S C SG +E G + F+ + + ++D++ + G +G A +
Sbjct: 311 TFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQT 370
Query: 406 LP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+P E VV W T++ C +G + ++++LD
Sbjct: 371 MPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLD 407
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR + + L+R M I PN+ TF F+ KAC KL L Q +H IV
Sbjct: 75 WNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIV 134
Query: 82 K------SPFVK--------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K +P V C +D A +FDEM D ASW+ M+ G+AQ G L+
Sbjct: 135 KVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALK 194
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M+ + +D T+ + L L K VHS+ GV DV + + Y+
Sbjct: 195 LFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYS 254
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A VF G+ E R V +W++M+AG + +L + M + + T
Sbjct: 255 KCGSLDNALKVFQGMAE--RDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTF 312
Query: 248 VSLLSS 253
S+LS+
Sbjct: 313 TSVLSA 318
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ + +A + L LFR+M+ ++ + T + C L L + +H ++
Sbjct: 176 WSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMD 235
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC LD A K+F MA RDV +W+ M+ G+A G E L+
Sbjct: 236 KEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQ 295
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M+ + VT + A H+
Sbjct: 296 LFDAMKRSKTIPNCVTFTSVLSACSHS 322
>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
Length = 726
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 181/552 (32%), Positives = 290/552 (52%), Gaps = 22/552 (3%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE-NVLRLFYNMRLVG 136
G+ + + + + L A +FD+M RD+ SWNA++ G AQ G V+ +F M G
Sbjct: 169 GNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDG 228
Query: 137 -IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
+Q D ++V + A L L + VH F + +GV+ VS+ N ++ Y KC A
Sbjct: 229 DVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSA 288
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
+F + ER VVSW + ++ +D+L + M +G + T V+L+S+
Sbjct: 289 RRLFDAMSER--DVVSWTTAIS-----MDGEDALTLFNGMRRDGVPPNEVTFVALMSALP 341
Query: 256 --CPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
CP Q +VH+ + + + N+LI+MY+K +D AR++FD + R ++W
Sbjct: 342 ADCPARGAQ--MVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAW 399
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG--QSGALELGKWFDNYA 371
A+ISGYAQ G ++AL LF +M A P+ T S++S ++ ++ G+ + + A
Sbjct: 400 NAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFASVLSAVTAVETVSMAYGQMYHSRA 458
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
S G D+ V ALIDMY+K G++ ++R+ F+ ++ +++WT +I+ A +G + +
Sbjct: 459 LSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVM 518
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
LF + + P+ V LAVL AC + G ++ G I D+G+ PE HYSC+
Sbjct: 519 SLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPE--HYSCVV 576
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAA 551
D+LGR G+L EA + + MP +LL AC+IH + EIGE +A L + EP +
Sbjct: 577 DMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERIARILTEKEPTESG 636
Query: 552 PYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC----TFTAEDRYHA 607
YV ++N YA G WDGVA +R M+ VKK G S F+++D H
Sbjct: 637 AYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWVDAGAGEALHLHKFSSDDTTHP 696
Query: 608 ESELTYPVLDCL 619
+E Y V D L
Sbjct: 697 RTEEIYAVADVL 708
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 164/310 (52%), Gaps = 13/310 (4%)
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
AA+ A + L ++H+ + G+ +V N+ + YAK A VF R R
Sbjct: 40 SAAVRASDPASLPALHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAA--ARARD 97
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVH 267
V S+N++++ + D + +L+F M+ +G R D T LS R +H
Sbjct: 98 VSSYNTILS--AFPDPAE-ALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLH 154
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ G DV V N L++ YS+ G + AR +FD + R VSW A+I G AQ GD
Sbjct: 155 ALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCP 214
Query: 328 -EALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
E + +F M G++ PD ++V S+I CG G LELG+ +A G++ V + N
Sbjct: 215 AEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNV 274
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+ MY KCG+ G AR LF A+ E+ VVSWTT I +++GE +AL LF+ + + PN
Sbjct: 275 LVAMYYKCGAPGSARRLFDAMSERDVVSWTTAI---SMDGE--DALTLFNGMRRDGVPPN 329
Query: 446 RVTFLAVLQA 455
VTF+A++ A
Sbjct: 330 EVTFVALMSA 339
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 204/428 (47%), Gaps = 27/428 (6%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT- 143
+ K A +F RDV+S+N +L F E + + +R ++ D VT
Sbjct: 77 YAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPA--EALDFASWMLRSGAVRPDAVTC 134
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ L+ AA + L++ +H+ G+ ADV V N +++Y++ L A VF +
Sbjct: 135 TVALSLAAGRGEGF-LVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMP 193
Query: 204 ERLRTVVSWNSMVAGCTY-GDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALV 261
R +VSWN+++ G GD + + + M+ +G + D +V S++ + L
Sbjct: 194 A--RDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLE 251
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
GR VH + G + VS+ N L++MY KCG SAR LFD + +R VSWT IS
Sbjct: 252 LGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAIS--- 308
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISG----CGQSGALELGKWFDNYACSGGLK 377
D ++AL LF M G P+ VT ++++S C GA + A SG
Sbjct: 309 --MDGEDALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSG--- 363
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N+LI MY+K + DAR +F +P + +++W +I+G A NG +AL+LF +
Sbjct: 364 -EAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM 422
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLG 495
L PN TF +VL A T + + Y + +S Y + D+
Sbjct: 423 ARC-LTPNETTFASVLSAVTAVETVSMAYG---QMYHSRALSMGFGDSEYVAGALIDMYA 478
Query: 496 RKGKLKEA 503
++G L+E+
Sbjct: 479 KRGNLEES 486
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 191/405 (47%), Gaps = 26/405 (6%)
Query: 40 LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPF 85
+ R ++ D++P+ ++ + AC L + +HG VK + +
Sbjct: 220 VFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMY 279
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
KC A ++FD M+ RDV SW + G E+ L LF MR G+ + VT +
Sbjct: 280 YKCGAPGSARRLFDAMSERDVVSWT---TAISMDG--EDALTLFNGMRRDGVPPNEVTFV 334
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
L A + VH+ + V + + N+ I+ YAK + A +VF +
Sbjct: 335 ALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPR- 393
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQG 263
R +++WN++++G + +D+L + M + TT S+LS+ E ++ G
Sbjct: 394 -REIIAWNAVISGYAQNGRCNDALELFSSMA-RCLTPNETTFASVLSAVTAVETVSMAYG 451
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
++ HS + GF V LI MY+K G+++ +R F R+ ++WTA+IS A+
Sbjct: 452 QMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARH 511
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMV 382
G + LF M +G PD V +L++++ C G ++ G+ FD+ A G++
Sbjct: 512 GSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPEH 571
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGE 426
+ ++DM + G + +A EL +P VS +++ C ++G+
Sbjct: 572 YSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGD 616
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 6/203 (2%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+ + G +V N+L + Y+K G SA +F R S+ ++S + D
Sbjct: 54 LHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFP---D 110
Query: 326 LDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
EAL M +G + PD VT +S G L + A GL +V V N
Sbjct: 111 PAEALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGN 170
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE-FVEALDLF-HQLMELDL 442
AL+ YS+ GS+G+AR +F +P + +VSW +I G A +G+ E + +F L + D+
Sbjct: 171 ALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDV 230
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
+P+R++ +V+ AC G LE G
Sbjct: 231 QPDRISVCSVIPACGGEGKLELG 253
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 144/353 (40%), Gaps = 62/353 (17%)
Query: 34 EAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------- 84
+ L LF M+++ + PN +TF + A +QM+H +K+
Sbjct: 310 DGEDALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASN 369
Query: 85 -----FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR--LVGI 137
+ K R+D A +FD M R++ +WNA++ G+AQ G + L LF +M L
Sbjct: 370 SLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARCLTPN 429
Query: 138 QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAEL 197
+ F +V+ A+ ++ + HS + +G V I YAK +L+ +
Sbjct: 430 ETTFASVLSAVT-AVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRK 488
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F E+ R++++W ++++ + ++ + M +G D ++++L++
Sbjct: 489 AFHETEQ--RSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTA---- 542
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSW--- 313
YG G +D+ R +FD + DR W
Sbjct: 543 -------------CRYG------------------GMVDAGRDIFDSMAADRGVELWPEH 571
Query: 314 -TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ ++ + G L EA L M A P + + S++ C G E+G+
Sbjct: 572 YSCVVDMLGRAGRLAEAEELMMRMPAG---PSVSALQSLLGACRIHGDAEIGE 621
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 304/613 (49%), Gaps = 23/613 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + +WN+ I ++ + + +F M ++ +TF + AC+KL DL ++
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK 221
Query: 75 MI--------HGHIVKSPFV--------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++ H H+ S F C L+ A++ F + + + AM+ + Q
Sbjct: 222 LVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQ 280
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
+ L LF M L G++ D + M + A + L + +H F I D V+
Sbjct: 281 RERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNA 340
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N I+ Y KC L+ A VF ++ R V+SWN+++A + ++L+ M +
Sbjct: 341 GNALINMYGKCGSLEEAVEVFRSMQHR--DVISWNTIIAAHGQHSQHPEALHLLHLMQLD 398
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + D + V+ L EAL +GR++HS + G DV + N ++ MY C D A
Sbjct: 399 GVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDA 458
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
+F + R +VSW AMI+ YA + L EAL LF M+ G +PD+++ ++ +S C
Sbjct: 459 SRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAA 518
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+L GK + GL+ N+ V NA+++MY+K GS+ AR++F +P V+SW M
Sbjct: 519 QASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGM 578
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI-IQYDDK 476
I+ A +G + L F ++ PN VTF++V+ AC+H G ++ G + + + +D
Sbjct: 579 ISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFP 638
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
IS P +HY CM DL+ R GKL A F+ + P+K D I T+L A K+H ++E
Sbjct: 639 TIS--PRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERAR 696
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A L +L P +A YV ++N Y G+ D A IR +M ++K P S + +
Sbjct: 697 KSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRV 756
Query: 597 CTFTAEDRYHAES 609
F D +A +
Sbjct: 757 HEFFTGDTTNART 769
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 247/526 (46%), Gaps = 25/526 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS-QMIHG-- 78
W IR ++ + L LFR M+ + P N F + AC+ +L+ + IHG
Sbjct: 67 WARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVL 126
Query: 79 --------HIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
H V + + KC ++ A K+FD + + V WNAM+ +AQ E +
Sbjct: 127 RGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAI 186
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA--DVSVCNTWIS 184
++FY M L G++A+ +T +G+ A K L + K V D D S ++
Sbjct: 187 QVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVN 246
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y C DL+ A F RL +++ +M+ T +++D++L ++ M+ G +LD
Sbjct: 247 FYGSCGDLEQAFRAFS--RHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+++L++ P L +GR++H FD V+ N LI+MY KCG ++ A +F
Sbjct: 304 IACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRS 363
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R +SW +I+ + Q EAL L M+ G D ++ ++ + C S AL G
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKG 423
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ ++ G+K +VM+ NA++DMY C S DA +F A+ + VSW MI A
Sbjct: 424 RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQ 483
Query: 425 GEF-VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
EAL LF Q+ P+ ++F+A L AC L +G + + + G+ N
Sbjct: 484 PRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLH-DRIRETGLESNMT 542
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + + ++ + G L A MP+ D W ++ A H
Sbjct: 543 V--ANAVLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQH 585
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 219/465 (47%), Gaps = 38/465 (8%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG- 136
G ++ +V C L A FD M V+D +W ++ Q+G E L LF +M+L G
Sbjct: 36 GDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGV 95
Query: 137 --IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
+ +FV V+G A + L + +H +++D V T + Y KC ++
Sbjct: 96 APVNRNFVAVLGACSA--DPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVED 153
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
A VF GI R + VV WN+M+ D + ++ + M+ G + + T + +L +
Sbjct: 154 ARKVFDGI--RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDAC 211
Query: 255 VCPEALVQGRLV--------HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ L +LV H H +H D S L++ Y CGD++ A F
Sbjct: 212 SKLKDLEVAKLVKLCVEEREHDH-LH-----DSSFATALVNFYGSCGDLEQAFRAF---- 261
Query: 307 DRTRVSW---TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
R R+ TAMI+ Y Q+ DEAL LF M G D + +++++ C LE
Sbjct: 262 SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEE 321
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ + +V NALI+MY KCGS+ +A E+F ++ + V+SW T+IA
Sbjct: 322 GRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQ 381
Query: 424 NGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISY 480
+ + EAL L H LM+LD ++ ++++F+ L C + L KG I I++ GI
Sbjct: 382 HSQHPEALHLLH-LMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVE---SGIKA 437
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ LD + + D+ G +A ++M + D W ++ A
Sbjct: 438 DVMLD--NAILDMYGSCKSTDDASRVFRAMKAR-DQVSWNAMITA 479
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL +L G+ VH+ D + + L+ MY CG + A+ FD + +
Sbjct: 4 LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA-LELGKWFD 368
++W +I + Q GD ++AL LF +M+ G P ++++ C LE G+
Sbjct: 64 ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
++ + V L+ MY KC S+ DAR++F + K VV W MI A
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+A+ +F+ ++ ++ R+TF+ VL AC+ LE
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLE 218
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
S +L+LGK C + + + L+ MY CGS+ DA+ F +P + ++W +
Sbjct: 11 SRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARL 70
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT-HTGFLEKGWAISIIQYDDK 476
I G+ +AL LF + + P F+AVL AC+ LE+G I + +
Sbjct: 71 IRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVL---R 127
Query: 477 GISYNPELDHY 487
G + E DHY
Sbjct: 128 GTAM--ESDHY 136
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 195/645 (30%), Positives = 313/645 (48%), Gaps = 27/645 (4%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
L R+ R + WN+ I V + +FR M + I P ++F + A
Sbjct: 170 LVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229
Query: 66 KLSDLIYSQMIHGHIVK--SPFV--------------KCDRLDCAYKIFDEMAVRDVASW 109
+++D + +++G +VK S +V + +D A +IFD R+ W
Sbjct: 230 RMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 110 NAMLVGFAQMGFLENVLRLFYN-MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
N M+ G+ Q + LF M D VT + A + L L + +H++ +
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYIL 349
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
V + N I Y++C + + VF + ER VV+WN+MV+ D+
Sbjct: 350 KSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLER--DVVTWNTMVSAFVQNGLDDEG 407
Query: 229 LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISM 288
L M GF +D T+ +LLS + G+ H++ I +G + + LI M
Sbjct: 408 LMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDGYLIDM 466
Query: 289 YSKCGDIDSARVLFD--GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
Y+K G I +A+ LF+ DR +W AMI+GY Q G +E +F M P+ V
Sbjct: 467 YAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAV 526
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T+ S++ C G + LGK +A L NV V AL+DMYSK G+I A +F
Sbjct: 527 TLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAET 586
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
EK V++TTMI +G AL LFH ++ ++P+ VTF+A+L AC++ G +++G
Sbjct: 587 LEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEG- 645
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCA 525
+ I Q ++ P +HY C+AD+LGR G++ EA +FV+ + + + IWG+LL A
Sbjct: 646 -LRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGA 704
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHS--AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKK 583
C+IH E+G+ VA L ++E S +V ++N YA G WD V +R M++ + K
Sbjct: 705 CRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMK 764
Query: 584 FPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S + G F + D H + Y +L+ LA+ ++ Y
Sbjct: 765 EAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGY 809
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 231/493 (46%), Gaps = 39/493 (7%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKACAKLS 68
+ I R +T+ WN+ I + N LL + +M+ + ++ TF KACA+
Sbjct: 60 FDSIPRPTTV-LWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQAR 118
Query: 69 DLIYSQMIHGHIVKSPF------------------VKCDRLDCAY---------KIFDEM 101
L + +H H+++S F + L AY ++FD M
Sbjct: 119 SLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTM 178
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
R+V +WN M+ + + L ++F M +GI+ V+ + + A
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNAN 238
Query: 162 SVHSFGIHIGVDA--DVSVCNTWISSYAKCDDLKMAELVF-CGIEERLRTVVSWNSMVAG 218
++ + +G D D V ++ I YA+ + A +F C +E R WN+M+ G
Sbjct: 239 VLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLE---RNTEVWNTMIGG 295
Query: 219 CTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
+ ++++ + +M + F LD T +S L++ + L GR +H++ + L
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTIL 355
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME 337
V ++N +I MYS+CG I ++ +F + +R V+W M+S + Q G DE L L F M+
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQ 415
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIG 397
G + D VT+ +++S + E+GK Y G++ M LIDMY+K G I
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD-GYLIDMYAKSGLIT 474
Query: 398 DARELFY--ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
A++LF + ++ +W MIAG NG E +F +++E ++RPN VT ++L A
Sbjct: 475 TAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPA 534
Query: 456 CTHTGFLEKGWAI 468
C G + G I
Sbjct: 535 CNPMGTIGLGKQI 547
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 232/543 (42%), Gaps = 39/543 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAI 152
A +FD + WN +++GF + L + MR + D T +A
Sbjct: 56 ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC-------------DDLKMAELVF 199
A+ L L K++H + + V N+ ++ Y+ C ++ + VF
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ R R VV+WN+M++ ++ ++ +R MM G R + V++ +
Sbjct: 176 DTM--RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMND 233
Query: 260 LVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+++ + G D D V+++ I MY++ G +D AR +FD +R W MI
Sbjct: 234 YDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293
Query: 318 SGYAQKGDLDEALRLFF-AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
GY Q EA+ LF ME+ D VT LS ++ Q L+LG+ Y
Sbjct: 294 GGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSST 353
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
V++ NA+I MYS+CGSIG + ++F + E+ VV+W TM++ NG E L L +
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFE 413
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLL 494
+ + + VT A+L ++ E G +I++ GI + +D Y + D+
Sbjct: 414 MQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRH---GIQFEG-MDGY--LIDMY 467
Query: 495 GRKGKLKEALD-FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK--LEPH--- 548
+ G + A F ++ D W ++ + E G V + + + P+
Sbjct: 468 AKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVT 527
Query: 549 --SAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
S P LG + G A IR + +N F G +L + K+ T +
Sbjct: 528 LASILPACNPMGTIGLGKQIHGFA-IRCFLNQN---VFVGTALLDMYSKSGAITYAENVF 583
Query: 607 AES 609
AE+
Sbjct: 584 AET 586
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
I + +S + G A LFD I T V W +I G+ +AL LF+A A
Sbjct: 40 IRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASP 98
Query: 342 LP--DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC------ 393
P D T S + C Q+ +L+LGK + + +V N+L++MYS C
Sbjct: 99 SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPY 158
Query: 394 -GSIGD------ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
G+ D R +F + ++ VV+W TMI+ +EA +F +M + +RP
Sbjct: 159 LGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTP 218
Query: 447 VTFLAVLQA 455
V+F+ V A
Sbjct: 219 VSFVNVFPA 227
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 186/644 (28%), Positives = 305/644 (47%), Gaps = 78/644 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I K + + +F QM D+ + Y+ M+ G
Sbjct: 145 WNAMIAGYAKKGQFNDAKKVFEQMPAKDL-------------------VSYNSMLAG--- 182
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
+ + ++ A + F+ M R+V SWN M+ G+ + G L + +LF + +
Sbjct: 183 ---YTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWV 239
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
+ GL + A+ L + S +V N I++Y + DL++ E V
Sbjct: 240 TMLCGLAKYGKMAEARELFDRMPS--------KNVVSWNAMIATYVQ--DLQVDEAVKLF 289
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+ + VSW +++ G K D++ Y M D+T +L+S + +
Sbjct: 290 KKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCK----DITAQTALMSGLIQNGRID 345
Query: 262 QGRLVHSH-GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
+ + S G H DV N++I+ YS+ G +D A LF + + VSW MISGY
Sbjct: 346 EADQMFSRIGAH-----DVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGY 400
Query: 321 AQKGDLDEALRLFFAMEAA-------------------------------GELPDLVTVL 349
AQ G +D A +F AM G+ PD T
Sbjct: 401 AQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFA 460
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+S C AL++G Y G +++ V NALI MY+KCG + A ++F +
Sbjct: 461 CTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECV 520
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS 469
++SW ++I+G ALNG +A F Q+ + P+ VTF+ +L AC+H G +G I
Sbjct: 521 DLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIF 580
Query: 470 IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+D I P +HYSC+ DLLGR G+L+EA + V+ M +K++AG+WG+LL AC++H
Sbjct: 581 KCMIEDFAIE--PLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVH 638
Query: 530 LNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
N+E+G + A LF+LEPH+A+ Y+ ++N +A GRW+ V +R +M+ + K PG S
Sbjct: 639 KNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSW 698
Query: 590 FHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
+ + F + D + +L+ LA H R++ +S +K
Sbjct: 699 IEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMRDKCNTSDMK 742
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 180/416 (43%), Gaps = 53/416 (12%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYSQ 74
S + WN+ I V + + + LF++M D + + +I + +Y+Q
Sbjct: 263 SKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQ 322
Query: 75 MIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
M I S ++ R+D A ++F + DV WN+M+ G+++ G ++ L LF
Sbjct: 323 MPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLF 382
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
M +K+ S+ NT IS YA+
Sbjct: 383 RQMP--------------------------IKNSVSW-------------NTMISGYAQA 403
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
+ A +F + E + +VSWNS++AG + + D+L M G + D +T
Sbjct: 404 GQMDRATEIFQAMRE--KNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFAC 461
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LS+ AL G +H + + G+ D+ V N LI+MY+KCG + SA +F I
Sbjct: 462 TLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVD 521
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDN 369
+SW ++ISGYA G ++A + F M + +PD VT + M+S C +G G D
Sbjct: 522 LISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQG--LDI 579
Query: 370 YAC---SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
+ C ++ + L+D+ + G + +A + K W +++ C
Sbjct: 580 FKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGAC 635
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 196/453 (43%), Gaps = 74/453 (16%)
Query: 71 IYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
I+ M H ++V S K R+ A ++FD+M++R++ SWN M+ G+ +E
Sbjct: 39 IFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEA 98
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LF M + + + T+ K LL+ V D + N I+
Sbjct: 99 SELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPD-------KLDTACWNAMIAG 151
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM---------- 235
YAK A+ VF + + +VS+NSM+AG T K +L F+ M
Sbjct: 152 YAKKGQFNDAKKVFEQMPA--KDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNL 209
Query: 236 MYNGF--RLDVTTVVSLLSSFVCPEALV----------QGRLVHSHGIHYGFDL----DV 279
M G+ D+++ L P A+ G++ + + FD +V
Sbjct: 210 MVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEAREL---FDRMPSKNV 266
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
N +I+ Y + +D A LF + + VSWT +I+GY + G LDEA +++ M
Sbjct: 267 VSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPC- 325
Query: 340 GELPDLVTVLSMISGCGQSGAL-ELGKWFDN---------------YACSGGLKD----- 378
D+ +++SG Q+G + E + F Y+ SG + +
Sbjct: 326 ---KDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLF 382
Query: 379 ------NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
N + N +I Y++ G + A E+F A+ EK +VSW ++IAG N +++AL
Sbjct: 383 RQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALK 442
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + +P++ TF L AC + L+ G
Sbjct: 443 SLVMMGKEGKKPDQSTFACTLSACANLAALQVG 475
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 188/439 (42%), Gaps = 72/439 (16%)
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
K +++ A +IF M +++ ++N+M+ A+ + + +LF M L + + + G
Sbjct: 29 KLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAG 88
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
H ++++ + + D I+ Y + L+ A + + ++L
Sbjct: 89 YL-------HNNMVEEASEL-FDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 140
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
T WN+M+AG +F+D+ + M P
Sbjct: 141 DTAC-WNAMIAGYAKKGQFNDAKKVFEQM---------------------PAK------- 171
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
D+ N++++ Y++ G + A F+ + +R VSW M++GY + GDL
Sbjct: 172 -----------DLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDL 220
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNA 385
A +LF + P+ V+ ++M+ G + G + E + FD NV+ NA
Sbjct: 221 SSAWQLFEKIPN----PNAVSWVTMLCGLAKYGKMAEARELFDRMPSK-----NVVSWNA 271
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
+I Y + + +A +LF +P K VSWTT+I G G+ EA +++Q+ D+
Sbjct: 272 MIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQ 331
Query: 446 RVTFLAVLQACTHTGFL-EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
A++ G + E S I D + +N + YS R G++ EAL
Sbjct: 332 ----TALMSGLIQNGRIDEADQMFSRIGAHDV-VCWNSMIAGYS-------RSGRMDEAL 379
Query: 505 DFVQSMPIKSDAGIWGTLL 523
+ + MPIK+ W T++
Sbjct: 380 NLFRQMPIKNSVS-WNTMI 397
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 24/295 (8%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N++IS+ +K I AR LFD + R VSW MI+GY ++EA LF M
Sbjct: 52 NSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPE---- 107
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
D + MI+ + G LE + K + NA+I Y+K G DA+++
Sbjct: 108 RDNFSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAMIAGYAKKGQFNDAKKV 164
Query: 403 FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFL 462
F +P K +VS+ +M+AG NG+ AL F + E N V++ ++ +G L
Sbjct: 165 FEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTE----RNVVSWNLMVAGYVKSGDL 220
Query: 463 EKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
W Q +K NP + M L + GK+ EA + MP K+ W +
Sbjct: 221 SSAW-----QLFEK--IPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVS-WNAM 272
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHS-AAPYVEMANKYALGGRWDGVANIRTMM 576
+ L ++ A LFK PH + + + N Y G+ D + M
Sbjct: 273 IATYVQDLQVD----EAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQM 323
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 277/542 (51%), Gaps = 8/542 (1%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A +FDEM RDV +W AM+ G+A + F+ M G + T+ + ++ +
Sbjct: 64 ARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRSPNEFTLSSVLKSCRN 123
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCD-DLKMAELVFCGIEERLRTVVSW 212
K L+ VH + +G++ + V N ++ YA C ++ A L+F I +++ V+W
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDI--KVKNDVTW 181
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
+++ G T+ L Y+ M+ + + + + +++ G+ +H+ +
Sbjct: 182 TTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVK 241
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GF ++ V+N+++ Y +CG + A+ F + D+ ++W +IS ++ D EAL +
Sbjct: 242 RGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISEL-ERSDSSEALLM 300
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F E+ G +P+ T S+++ C AL G+ G NV + NALIDMY+K
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAK 360
Query: 393 CGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
CG I D+ +F + E+ +VSWT+M+ G +G EA++LF +++ +RP+R+ F+A
Sbjct: 361 CGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 452 VLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
VL AC H G +EKG + + GI NP+ D Y+C+ DLLGR GK+ EA + V+ MP
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGI--NPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 512 IKSDAGIWGTLLCACKIHLNIE-IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
K D WG +L ACK H + I A + +L+P YV ++ YA G+W A
Sbjct: 479 FKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLSYIYAAEGKWVEFA 538
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
+R MM+ KK G S + + +F D+ + Y VL L ++E Y
Sbjct: 539 RVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSDKMCPNASSVYSVLGLLIEETKEAGYVP 598
Query: 631 HL 632
L
Sbjct: 599 DL 600
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 199/418 (47%), Gaps = 21/418 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + N F +M + PN T + K+C + L Y ++HG +V
Sbjct: 79 WTAMITGYASSNYNSCAWECFHEMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV 138
Query: 82 K--------------SPFVKCD-RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + + C ++ A+ IF ++ V++ +W ++ GF +G L
Sbjct: 139 KLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+++ M L + +A+ ++ K +H+ + G +++ V N+ + Y
Sbjct: 199 KMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFY 258
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C L A+ F +E+ + +++WN++++ D ++L ++ GF + T
Sbjct: 259 CRCGYLSEAKRYFHEMED--KDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYT 315
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI-DSARVLFDGI 305
SL+++ AL G+ +H GF+ +V + N LI MY+KCGDI DS RV +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIE 375
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG- 364
R VSWT+M+ GY G EA+ LF M ++G PD + ++++S C +G +E G
Sbjct: 376 ERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
K+F+ G+ + + N ++D+ + G IG+A EL +P K S W ++ C
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 10/244 (4%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N ++S + K G ++ AR LFD + +R V+WTAMI+GYA A F M G
Sbjct: 50 NLIVSYFEK-GLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRS 108
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ T+ S++ C L G G++ ++ V NAL++MY+ C +A L
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFL 168
Query: 403 -FYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHT 459
F + K V+WTT+I G G+ + L ++ Q++ D+ P +T A +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDS 228
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
K S+++ +G N L + + D R G L EA + M K D W
Sbjct: 229 VTTGKQIHASVVK---RGFQSN--LPVMNSILDFYCRCGYLSEAKRYFHEMEDK-DLITW 282
Query: 520 GTLL 523
TL+
Sbjct: 283 NTLI 286
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
K +++ N ++ + K G + +AR LF +PE+ VV+WT MI G A + A + FH+
Sbjct: 43 KHHILATNLIVSYFEK-GLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHE 101
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISY--NPELDHYSCMAD 492
+ + PN T +VL++C + L G + +++ +G Y N ++ Y+ +
Sbjct: 102 MFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSV 161
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
++ A + + +K+D W TL+ HL IG Y LE P
Sbjct: 162 ------TMEAAFLIFRDIKVKNDV-TWTTLITGF-THLGDGIGGLKMYKQMLLENADVTP 213
Query: 553 Y 553
Y
Sbjct: 214 Y 214
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 274/563 (48%), Gaps = 25/563 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
LF M Q P+ T + C + + + +HG KS +
Sbjct: 138 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 197
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC L A +F EM + SWN M+ ++Q G E + +F NM ++ VT++
Sbjct: 198 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN 257
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L A H H + +H + G+ D+SV + + +Y++C L AE ++ ++
Sbjct: 258 LLSA--HVSH----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD- 310
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++V S+V+ D ++ ++ ++D +V +L + G +
Sbjct: 311 -SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + I G V+N LI+MYSK D+++ LF+ + + +SW ++ISG Q G
Sbjct: 370 HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRA 429
Query: 327 DEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
A +F M G LPD +T+ S+++GC Q L LGK Y ++ VC A
Sbjct: 430 STAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTA 489
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LIDMY+KCG+ A +F ++ +W +MI+G +L+G AL + ++ E L+P+
Sbjct: 490 LIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPD 549
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TFL VL AC H GF+++G + GIS P L HY+ M LLGR EAL
Sbjct: 550 EITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS--PTLQHYALMVGLLGRACLFTEALY 607
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
+ M IK D+ +WG LL AC IH +E+GEYVA +F L+ + YV M+N YA
Sbjct: 608 LIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAM 667
Query: 566 WDGVANIRTMMKRNQVKKFPGQS 588
WD V +R MMK N + G S
Sbjct: 668 WDDVVRVRNMMKDNGYDGYLGVS 690
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 146/566 (25%), Positives = 263/566 (46%), Gaps = 49/566 (8%)
Query: 13 IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
+YR ++ ++S ++ ++ + + +FR + ++ + PN+ T +A +
Sbjct: 9 LYRD--LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFK 66
Query: 73 SQM--IHGHIVKSP-----FVKCDRLDCAYK---------IFDEMAVRDVASWNAMLVGF 116
Q+ + H+ KS +VK L+ K +FDEM RD WNA++ G+
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY 126
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
++ G+ + +LF M G T++ L +S +SVH G++ D
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
V N IS Y+KC +L AE++F E + ++ VSWN+M+ + ++++ +++M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLF--REMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
+ T+++LLS+ V E L H + G D+SV+ +L+ YS+CG +
Sbjct: 245 EKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
SA L+ + V T+++S YA+KGD+D A+ F D V ++ ++ GC
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358
Query: 357 QSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+S +++G YA GL +V N LI MYSK + LF L E ++SW +
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 417 MIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+I+GC +G A ++FHQ+M L P+ +T ++L C+ L G +
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGK-----ELHG 473
Query: 476 KGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ N E +++ C A D+ + G +A +S+ A W +++
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TWNSMIS--------- 523
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANK 559
Y L L+ + + Y+EM K
Sbjct: 524 -----GYSLSGLQHRALSCYLEMREK 544
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 261/518 (50%), Gaps = 43/518 (8%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE---LVFCGIEERLRTVVSWN 213
S +K VH+ I G+ V I K D + M LVF + W
Sbjct: 55 FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVD-VPMGSYPLLVFGQVN--YPNPFLWT 111
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+M+ G +S NFY M +G T +L + + G+ VH+ I
Sbjct: 112 AMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILI 171
Query: 274 G-FDLDVSVINTLISMYSKCG-------------------------------DIDSARVL 301
G F D+ V N++I +Y KCG D++SA L
Sbjct: 172 GGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGL 231
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + V+WTAM++GYAQ G EAL F M+ G D VT+ +IS C Q GA+
Sbjct: 232 FDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV 291
Query: 362 ELGKWFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
+ W + A G NV+V +ALIDMYSKCGS +A ++F + E+ V S+++MI
Sbjct: 292 KHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMIL 351
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A++G AL LFH +++ ++RPN+VTF+ +L AC+H G +E+G + +K
Sbjct: 352 GYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR--QLFAKMEKFFG 409
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P DHY+CM DLLGR G L+EALD V++MP++ + G+WG LL AC+IH N +I + A
Sbjct: 410 VAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAA 469
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH-INGKTCT 598
LFKLEP+ Y+ ++N YA GRW+ V+ +R +++ KK PG S F NG+
Sbjct: 470 NELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHD 529
Query: 599 FTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIP 636
F A D H S L L R Y +L P
Sbjct: 530 FFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAP 567
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 200/478 (41%), Gaps = 89/478 (18%)
Query: 44 QMKQNDIEPNNLTFPFIA--------KACAKLSD-LIYSQM--IHGHIVKSPFVKCD--- 89
Q Q PN + FP + + + L D ++SQ+ +H HI+++ +C
Sbjct: 18 QNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVL 77
Query: 90 --------RLDCAYK-----IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
++D +F ++ + W AM+ G+A G L + MR G
Sbjct: 78 TKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDG 137
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI-GVDADVSVCNTWISSYAKCDDLKMA 195
+ T L +A A ++ L K VH+ I I G +D+ V N+ I Y KC L A
Sbjct: 138 VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCA 197
Query: 196 ELVFCGIEER-----------------------------LRTVVSWNSMVAGCTYGDKFD 226
VF + ER L+ +V+W +MV G +
Sbjct: 198 RKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPK 257
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL--DVSVINT 284
++L +++ M G D T+ ++S+ A+ + GF +V V +
Sbjct: 258 EALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSA 317
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
LI MYSKCG D A +F+ + +R S+++MI GYA G AL+LF M P+
Sbjct: 318 LIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPN 377
Query: 345 LVTVLSMISGCGQSGALELG--------KWF------DNYACSGGLKDNVMVCNALIDMY 390
VT + ++S C +G +E G K+F D+YAC ++D+
Sbjct: 378 KVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC-------------MVDLL 424
Query: 391 SKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
+ G + +A +L +P E W ++ C ++G A ++L +L+ PN +
Sbjct: 425 GRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLE--PNGI 480
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 52/292 (17%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W + IR + ++ + +M+++ + P + TF + KAC ++ + +H
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169
Query: 78 -----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVAS------------------ 108
G+ + +VKC L CA K+FDEM+ RDV S
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229
Query: 109 -------------WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH-- 153
W AM+ G+AQ G + L F M+ VG++ D VT+ G+ A
Sbjct: 230 GLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289
Query: 154 -AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
KH + ++ + G +V V + I Y+KC A VF ++E R V S+
Sbjct: 290 AVKHANWIRDIAERS-GFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE--RNVFSY 346
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+SM+ G + +L + M+ R + T + +LS+ + QGR
Sbjct: 347 SSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGR 398
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 184/499 (36%), Positives = 259/499 (51%), Gaps = 10/499 (2%)
Query: 126 LRLFYNMRL--VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LRLF +M V ++ D T+ L AA +L +S H+ IG+ ++ I
Sbjct: 100 LRLFLSMLRAEVRVRPDAYTLPFLLLAAARCPAPALARSAHALLEKIGLGDHDHTVHSLI 159
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG-FRL 242
+ Y+ DD A VF GI R VVSWNSMV + R M+ G
Sbjct: 160 TMYSCLDDHLAARRVFDGISHR--DVVSWNSMVKAYERAGMVAEVEGMLRSMVTEGAVAP 217
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T+ +L++ LV GR V G ++D + + L+ MY KCG++ AR +F
Sbjct: 218 NGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMAEARRVF 277
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DGI + V+W AMI+GYAQ G +EA+ LF +M AG PD +T++ ++S C GAL+
Sbjct: 278 DGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALK 337
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
LG D YA GL +NV V AL+DMY+KCG + A +F +P K SW +I G A
Sbjct: 338 LGVELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLA 397
Query: 423 LNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY 480
NG +A+ F +LM E L+P+ +TF+ VL AC H G LE G +
Sbjct: 398 FNGRGYDAIQQF-ELMRDEKGLQPDDITFIGVLSACVHAGLLEYGR--QLFNSLTPVFKI 454
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P ++HYSC+ DLL R G L+EA DF++ MP K DA + G LL AC+ N E+GE V
Sbjct: 455 IPRIEHYSCIVDLLARAGHLEEAWDFIEEMPGKVDAVMLGALLAACRKCKNTEVGERVIN 514
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+ KLEP ++ YV + YA + D A + +M+ V K PG S +NGK F
Sbjct: 515 RIMKLEPSNSWNYVVSSKIYATSDKMDESARMIGLMRERGVNKTPGCSWVEVNGKVLEFY 574
Query: 601 AEDRYHAESELTYPVLDCL 619
A +E Y ++ L
Sbjct: 575 ASTEPQHGAEDMYQLMGVL 593
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 191/404 (47%), Gaps = 22/404 (5%)
Query: 38 TLLLFRQMKQNDIE--PNNLTFPFIAKACAKLSDLIYSQMIHG-----------HIVKSP 84
+L LF M + ++ P+ T PF+ A A+ ++ H H V S
Sbjct: 99 SLRLFLSMLRAEVRVRPDAYTLPFLLLAAARCPAPALARSAHALLEKIGLGDHDHTVHSL 158
Query: 85 FVKCDRLD---CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQAD 140
LD A ++FD ++ RDV SWN+M+ + + G + V + +M G + +
Sbjct: 159 ITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAYERAGMVAEVEGMLRSMVTEGAVAPN 218
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
VT+ + A A +L L + V + G++ D + + + Y KC ++ A VF
Sbjct: 219 GVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMAEARRVFD 278
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
GI R + VV+WN+M+ G ++++ + M G D T+V +LSS AL
Sbjct: 279 GI--RHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGAL 336
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G + ++ + G +V V L+ MY+KCGD++ A +F + + SW A+I G
Sbjct: 337 KLGVELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGL 396
Query: 321 AQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGGLKD 378
A G +A++ F M + G PD +T + ++S C +G LE G+ F++ +
Sbjct: 397 AFNGRGYDAIQQFELMRDEKGLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIP 456
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
+ + ++D+ ++ G + +A + +P K+ V ++A C
Sbjct: 457 RIEHYSCIVDLLARAGHLEEAWDFIEEMPGKVDAVMLGALLAAC 500
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 158/367 (43%), Gaps = 51/367 (13%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+ WNS ++ + + R M + + PN +T + AC +L+ + +
Sbjct: 183 VVSWNSMVKAYERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVE 242
Query: 78 --------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G + + KC + A ++FD + +DV +WNAM+ G+AQ G
Sbjct: 243 EWVRSAGMEVDSLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSN 302
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF++MR G+ D +T++G+ + L L + ++ + G+ +V V +
Sbjct: 303 EAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALV 362
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNGFRL 242
YAKC DL+ A VF + + SWN+++ G + + D++ + M G +
Sbjct: 363 DMYAKCGDLEKATHVFGKMP--FKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQP 420
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D T + +LS+ VH+ + YG L N+L ++ I+
Sbjct: 421 DDITFIGVLSA-----------CVHAGLLEYGRQL----FNSLTPVFKIIPRIE------ 459
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
++ ++ A+ G L+EA F E G++ D V + ++++ C + E
Sbjct: 460 ---------HYSCIVDLLARAGHLEEAWD--FIEEMPGKV-DAVMLGALLAACRKCKNTE 507
Query: 363 LGKWFDN 369
+G+ N
Sbjct: 508 VGERVIN 514
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 293/586 (50%), Gaps = 71/586 (12%)
Query: 35 AHKTLLLFRQMKQN--DIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLD 92
A + L+ QM + + P T + KA A+ L + +H H+ K+ F +R+
Sbjct: 83 ARDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERI- 141
Query: 93 CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAI 152
A + D +A+ G L++ R+F +
Sbjct: 142 -ATTLVDL---------------YARCGRLDDARRVFDRL-------------------- 165
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L+K D + NT I++Y + ++++AE +F + ER +
Sbjct: 166 ------LVK-------------DAQLYNTMIAAYMEAGEVELAEELFEVMPER--NTHTL 204
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
MV G + D + + + M NG +++ +++S F ++ R V G+
Sbjct: 205 MEMVGGYSARGDMDSAKHVFE--MANGV-VNMVLCTAMISGFAKTGSVDDARSVFD-GMR 260
Query: 273 YGFDLDVSVINTLIS-MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
DV+ N +I MY+KCG ++ AR +FD + +R V WT+MISGY Q G +A++
Sbjct: 261 ---QRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVK 317
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
LF M+ +G D T+ +++S CGQ GAL+LG++ Y GL + V N+LIDMYS
Sbjct: 318 LFRDMQISGVKADDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLIDMYS 377
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFL 450
KCG I A E+F L ++ SWT MI G A+NG EALDLF Q+ E ++ PN +TFL
Sbjct: 378 KCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFL 437
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
VL +C+H G +E+G+ GI+ P ++HY CM DLLGR L EA F++ M
Sbjct: 438 GVLTSCSHGGLVEQGYHHFHRMSKVYGIA--PRIEHYGCMVDLLGRAKLLAEAEQFIEEM 495
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
PI D IW +LL AC+ + + EYVA + +LEP V ++N YA RW V
Sbjct: 496 PIAPDVAIWRSLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDVN 555
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVL 616
+RT M R++V K PG S+ +NG F + D H E+E Y +L
Sbjct: 556 KVRTGMGRSRVSKRPGCSVIEVNGCAHEFLSGDETHLETEAIYNIL 601
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
W S I + + + LFR M+ + ++ ++ T + +C ++ L + +H
Sbjct: 299 WTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGRYVHAYCD 358
Query: 78 ------GHIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G VK+ + KC + A++IF + RD SW M++GFA G L
Sbjct: 359 VHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALD 418
Query: 128 LFYNMRLVG-IQADFVTVMGLTQAAIHA 154
LF M G + + +T +G+ + H
Sbjct: 419 LFAQMEEEGEVMPNEITFLGVLTSCSHG 446
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 235/403 (58%), Gaps = 3/403 (0%)
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
D++ FYR M+++G T S++ + AL G+ +HSH + G+ D+ V LI
Sbjct: 108 DTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALI 167
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
++Y+K D+ A+ +FD + RT ++W ++ISGY Q G E++ LF M +G PD
Sbjct: 168 ALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSA 227
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++S++S C Q GAL+ G W +YA G NV++ +LI+MY++CG++ ARE+F ++
Sbjct: 228 TIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSM 287
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
E+ VV+WT MI+G ++G +A++LF ++ RPN +TF+AVL AC H+G ++ G
Sbjct: 288 KERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGR 347
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS-MPIKSDAGIWGTLLCA 525
+ + G+ P ++H CM D+ GR G L +A F++ +P + +W ++L A
Sbjct: 348 RVFSSMKEAYGLV--PGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGA 405
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C++H N ++G VA + +EP + YV ++N YAL GR D V +R MM R ++KK
Sbjct: 406 CRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQV 465
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S IN KT F+ D+ H ++ Y LD L E Y
Sbjct: 466 GYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGY 508
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 209/421 (49%), Gaps = 32/421 (7%)
Query: 30 VNKNEAHKTLLLFRQ--MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV------ 81
+NK + L F+ + D + ++ + ++ +L +L Q +H HI+
Sbjct: 1 MNKIKLQTQQLAFQHPVTRNFDTQSHSPVHEALLRSGPRLRNL---QQVHAHIIVSGLHR 57
Query: 82 -KSPFVKCDRLDC-------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR 133
+S K L C A ++F + D ++++L ++ GF + + + M
Sbjct: 58 SRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRML 117
Query: 134 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLK 193
G T + +A L L K +HS + G +D+ V I+ YAK D+K
Sbjct: 118 FSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMK 177
Query: 194 MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
+A+ VF + +R T+++WNS+++G +S+ + MM +GF+ D T+VSLLSS
Sbjct: 178 VAKKVFDAMPQR--TIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSS 235
Query: 254 FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
AL G +H + GFDL+V + +LI+MY++CG++ AR +FD + +R V+W
Sbjct: 236 CSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTW 295
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF-----D 368
TAMISGY G +A+ LF M A G P+ +T ++++S C SG ++ G+ +
Sbjct: 296 TAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKE 355
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNGE 426
Y G++ NV ++DM+ + G + DA + + E WT+M+ C ++
Sbjct: 356 AYGLVPGVEHNV----CMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRN 411
Query: 427 F 427
F
Sbjct: 412 F 412
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 177/424 (41%), Gaps = 33/424 (7%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------S 83
T+L +R+M + +N TF + KACA LS L + IH H++ +
Sbjct: 109 TVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIA 168
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+ K + A K+FD M R + +WN+++ G+ Q G + + LF+ M G Q D T
Sbjct: 169 LYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSAT 228
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
++ L + L +H + G D +V + + I+ Y +C ++ A VF ++
Sbjct: 229 IVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK 288
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
E R VV+W +M++G ++ + M G R + T V++LS+ + G
Sbjct: 289 E--RNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDG 346
Query: 264 RLVHS-----HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT--RVSWTAM 316
R V S +G+ G + +V +++ M+ + G ++ A + WT+M
Sbjct: 347 RRVFSSMKEAYGLVPGVEHNVCMVD----MFGRAGLLNDAYQFIKKFIPKEPGPAVWTSM 402
Query: 317 ISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+ + D +++ + E P +LS I +G ++ + N
Sbjct: 403 LGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYAL--AGRMDRVEMVRNMMTRRR 460
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
LK V I+ + S+GD + I ++ C+ +G L H
Sbjct: 461 LKKQVGYSTIEINRKTYLFSMGDKS---HPQTNTIYRYLDELMCRCSESGYVPAPESLMH 517
Query: 436 QLME 439
L E
Sbjct: 518 DLEE 521
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 6/265 (2%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
VH+H I G S++ LIS+ G I AR LF + + + +++ ++ G
Sbjct: 46 VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 105
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ + + M +G T S+I C AL LGK ++ G ++ V A
Sbjct: 106 SIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAA 165
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LI +Y+K + A+++F A+P++ +++W ++I+G NG E++ LFH +ME +P+
Sbjct: 166 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 225
Query: 446 RVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
T +++L +C+ G L+ G W D G N L + + ++ R G + +A
Sbjct: 226 SATIVSLLSSCSQLGALDFGCWLHDYA--DGNGFDLNVVLG--TSLINMYTRCGNVSKAR 281
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
+ SM + + W ++ +H
Sbjct: 282 EVFDSMK-ERNVVTWTAMISGYGMH 305
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 23/238 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI WNS I +++ LF M ++ +P++ T + +C++L L + +H
Sbjct: 190 TIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLH 249
Query: 78 --------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G + + + +C + A ++FD M R+V +W AM+ G+ G+
Sbjct: 250 DYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGR 309
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS-----FGIHIGVDADVSV 178
+ LF MR G + + +T + + A H+ + + V S +G+ GV+ +V +
Sbjct: 310 QAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCM 369
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+ + + L A + W SM+ C FD + H++
Sbjct: 370 ----VDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVL 423
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 271/526 (51%), Gaps = 7/526 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+VKC RL A ++FD M R+ S N ++ G+A G + L L +R+ + +
Sbjct: 60 YVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL---LRVADFGLNEYVL 116
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
A H + + + H + I G+ VC+ + Y +C + A VF +
Sbjct: 117 SSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSS 176
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
V ++NSM+ G + D S + R M+ N + D + V++L + +V G
Sbjct: 177 F--NVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGS 234
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH+ + +L+V V + L+ MY KC A +F+ + ++ VSWTA+++ Y Q
Sbjct: 235 QVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNE 294
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
++AL+LF ME G P+ T ++ C L+ G G + VCN
Sbjct: 295 LFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCN 354
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
AL++MYSK GS+ DAR +F ++P + VVSW ++I G A +G EA++ FH ++ + P
Sbjct: 355 ALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVP 414
Query: 445 NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
+ VTF+ VL AC G +++G+ I + G+ P +HY+CM LL R G+L EA
Sbjct: 415 SYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGV--KPGKEHYTCMVGLLCRVGRLDEAE 472
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGG 564
F++S I +D W +LL +C+++ N +G VA +F+L+P YV ++N YA
Sbjct: 473 RFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKAN 532
Query: 565 RWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
RWDGV +R +M+ V+K PG S + + FT+ED+ H E
Sbjct: 533 RWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYME 578
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 144/330 (43%), Gaps = 40/330 (12%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + +NS I +++ + + + R M +N + +++++ + CA +++
Sbjct: 176 SFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQ 235
Query: 76 IHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
+H +K + KCD A ++F+ + +++ SW A++ + Q
Sbjct: 236 VHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNEL 295
Query: 122 LENVLRLFYNMRLVGIQA-DFVTVMGLTQAAIHAKHLSLLKSVHSFG---IHIGVDADVS 177
E+ L+LF +M + G++ +F + L A L+ LK+ ++ G + G +
Sbjct: 296 FEDALQLFLDMEMEGVRPNEFTYAVALNSCA----GLATLKNGNALGACTMKTGHWGLLP 351
Query: 178 VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY 237
VCN ++ Y+K ++ A VF + R VVSWNS++ G + + +++ + M++
Sbjct: 352 VCNALMNMYSKSGSVEDARRVFLSMP--CRDVVSWNSIIIGYAHHGRAREAMEAFHDMLF 409
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY--------GFDLDVSVINTLISMY 289
T + +LS A Q LV G +Y G ++ +
Sbjct: 410 AEEVPSYVTFIGVLS------ACAQLGLV-DEGFYYLNIMMKEVGVKPGKEHYTCMVGLL 462
Query: 290 SKCGDIDSARVLFDGICDRTR-VSWTAMIS 318
+ G +D A + C T V+W +++S
Sbjct: 463 CRVGRLDEAERFIESNCIGTDVVAWRSLLS 492
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 6 LPPRLNRIYR---SSTINQWNSQIREAVNKNEAHK-TLLLFRQMKQNDIEPNNLTFPFIA 61
P NR++ I W + I A +NE + L LF M+ + PN T+
Sbjct: 264 FPHEANRVFEVLPEKNIVSWTA-IMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVAL 322
Query: 62 KACAKLSDLIYSQ------MIHGHIVKSP--------FVKCDRLDCAYKIFDEMAVRDVA 107
+CA L+ L M GH P + K ++ A ++F M RDV
Sbjct: 323 NSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVV 382
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
SWN++++G+A G + F++M +VT +G+ A
Sbjct: 383 SWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSA 425
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 235/403 (58%), Gaps = 3/403 (0%)
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
D++ FYR M+++G T S++ + AL G+ +HSH + G+ D+ V LI
Sbjct: 172 DTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALI 231
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
++Y+K D+ A+ +FD + RT ++W ++ISGY Q G E++ LF M +G PD
Sbjct: 232 ALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSA 291
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++S++S C Q GAL+ G W +YA G NV++ +LI+MY++CG++ ARE+F ++
Sbjct: 292 TIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSM 351
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
E+ VV+WT MI+G ++G +A++LF ++ RPN +TF+AVL AC H+G ++ G
Sbjct: 352 KERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGR 411
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQS-MPIKSDAGIWGTLLCA 525
+ + G+ P ++H CM D+ GR G L +A F++ +P + +W ++L A
Sbjct: 412 RVFSSMKEAYGLV--PGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGA 469
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C++H N ++G VA + +EP + YV ++N YAL GR D V +R MM R ++KK
Sbjct: 470 CRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQV 529
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
G S IN KT F+ D+ H ++ Y LD L E Y
Sbjct: 530 GYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGY 572
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 209/422 (49%), Gaps = 32/422 (7%)
Query: 29 AVNKNEAHKTLLLFRQ--MKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV----- 81
+NK + L F+ + D + ++ + ++ +L +L Q +H HI+
Sbjct: 64 TMNKIKLQTQQLAFQHPVTRNFDTQSHSPVHEALLRSGPRLRNL---QQVHAHIIVSGLH 120
Query: 82 --KSPFVKCDRLDC-------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM 132
+S K L C A ++F + D ++++L ++ GF + + + M
Sbjct: 121 RSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRM 180
Query: 133 RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDL 192
G T + +A L L K +HS + G +D+ V I+ YAK D+
Sbjct: 181 LFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDM 240
Query: 193 KMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLS 252
K+A+ VF + +R T+++WNS+++G +S+ + MM +GF+ D T+VSLLS
Sbjct: 241 KVAKKVFDAMPQR--TIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLS 298
Query: 253 SFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
S AL G +H + GFDL+V + +LI+MY++CG++ AR +FD + +R V+
Sbjct: 299 SCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVT 358
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF----- 367
WTAMISGY G +A+ LF M A G P+ +T ++++S C SG ++ G+
Sbjct: 359 WTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMK 418
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNG 425
+ Y G++ NV ++DM+ + G + DA + + E WT+M+ C ++
Sbjct: 419 EAYGLVPGVEHNV----CMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHR 474
Query: 426 EF 427
F
Sbjct: 475 NF 476
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 172/420 (40%), Gaps = 25/420 (5%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------S 83
T+L +R+M + +N TF + KACA LS L + IH H++ +
Sbjct: 173 TVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIA 232
Query: 84 PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
+ K + A K+FD M R + +WN+++ G+ Q G + + LF+ M G Q D T
Sbjct: 233 LYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSAT 292
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
++ L + L +H + G D +V + + I+ Y +C ++ A VF ++
Sbjct: 293 IVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK 352
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
E R VV+W +M++G ++ + M G R + T V++LS+ + G
Sbjct: 353 E--RNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDG 410
Query: 264 RLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT--RVSWTAMISGY 320
R V S YG V ++ M+ + G ++ A + WT+M+
Sbjct: 411 RRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGAC 470
Query: 321 AQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+ D +++ + E P +LS I +G ++ + N LK
Sbjct: 471 RMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYAL--AGRMDRVEMVRNMMTRRRLKKQ 528
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V I+ + S+GD + I ++ C+ +G L H L E
Sbjct: 529 VGYSTIEINRKTYLFSMGDKS---HPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEE 585
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 6/265 (2%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
VH+H I G S++ LIS+ G I AR LF + + + +++ ++ G
Sbjct: 110 VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 169
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ + + M +G T S+I C AL LGK ++ G ++ V A
Sbjct: 170 SIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAA 229
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LI +Y+K + A+++F A+P++ +++W ++I+G NG E++ LFH +ME +P+
Sbjct: 230 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 289
Query: 446 RVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEAL 504
T +++L +C+ G L+ G W D G N L + + ++ R G + +A
Sbjct: 290 SATIVSLLSSCSQLGALDFGCWLHDYA--DGNGFDLNVVLG--TSLINMYTRCGNVSKAR 345
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
+ SM + + W ++ +H
Sbjct: 346 EVFDSMK-ERNVVTWTAMISGYGMH 369
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 23/238 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI WNS I +++ LF M ++ +P++ T + +C++L L + +H
Sbjct: 254 TIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLH 313
Query: 78 --------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G + + + +C + A ++FD M R+V +W AM+ G+ G+
Sbjct: 314 DYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGR 373
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS-----FGIHIGVDADVSV 178
+ LF MR G + + +T + + A H+ + + V S +G+ GV+ +V +
Sbjct: 374 QAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCM 433
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+ + + L A + W SM+ C FD + H++
Sbjct: 434 ----VDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVL 487
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 185/562 (32%), Positives = 287/562 (51%), Gaps = 25/562 (4%)
Query: 71 IYSQMIHGHIVKSPFVKCDRLDC----------AYKIFDEMAVRDVASWNAMLVGFAQMG 120
I++Q+I +++ F LD A +F ++ + N M+ + +
Sbjct: 30 IHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTESS 89
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
E LR + MR G+ D T + +A L V + G DV V N
Sbjct: 90 TPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVN 149
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
IS Y +C + A VF G E+ +VSWNSM+ G + + +++ N + M
Sbjct: 150 GLISMYCRCGETGWARAVFDGFSEK--DLVSWNSMLGGYVWCGEMENAQNMFDEMPER-- 205
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
DV + ++ + V V + D+ N++I Y+K G+++ AR
Sbjct: 206 --DVVSWSIMIDGYGKKMGEVNRARVFFDSMP---TRDLVSWNSMIDGYAKVGEMEVARE 260
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
+FD + + +SW+ MI GYAQ D EAL LF M G PD V+V+ +S C Q GA
Sbjct: 261 IFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGA 320
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L+ G+W Y + +++V AL+DMY KCGS +AR +F ++PE+ VVSW MI G
Sbjct: 321 LDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVG 380
Query: 421 CALNGEFVEALDLFHQLMELDLRP-NRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGI- 478
+NG EAL+ F Q ME++ P + + FL VL AC+H + +G I KG+
Sbjct: 381 LGMNGFGKEALECFTQ-MEMERIPMDDLLFLGVLMACSHANLVTEGLHIF---NQMKGVY 436
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
P+L+HY C+ DLLGR G+L + + +QSMP+K +A +WG+LL AC+IH N+ + E V
Sbjct: 437 RLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIV 496
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
L +L+ + YV M+N YA G W+G+ IR +MK ++KK G+S+ ++G
Sbjct: 497 VERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEE 556
Query: 599 FTAEDRYHAESELTYPVLDCLA 620
F + ++ H E V+ LA
Sbjct: 557 FVSGEKSHILREEIELVIWSLA 578
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 194/434 (44%), Gaps = 25/434 (5%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N+ ++ + + L + +M++ + +N T+PF+ KAC + L+ ++ G VK
Sbjct: 79 NTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVK 138
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
S + +C A +FD + +D+ SWN+ML G+ G +EN +
Sbjct: 139 RGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNM 198
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F M + + + + G + K + + F + D+ N+ I YAK
Sbjct: 199 FDEMPERDVVSWSIMIDG------YGKKMGEVNRARVFFDSMPT-RDLVSWNSMIDGYAK 251
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
++++A +F + ++ V+SW+ M+ G ++LN +R M+ G + D +VV
Sbjct: 252 VGEMEVAREIFDKMLQK--NVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVV 309
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
+S+ AL QGR +H + LD+ V L+ MY KCG D AR +F+ + +R
Sbjct: 310 GAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPER 369
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWF 367
VSW MI G G EAL F ME D + L ++ C + + G F
Sbjct: 370 NVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIF 429
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGE 426
+ L+ + L+D+ + G + + + ++P K + W +++ C ++
Sbjct: 430 NQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQN 489
Query: 427 FVEALDLFHQLMEL 440
A + +L EL
Sbjct: 490 VTLAEIVVERLAEL 503
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W+ I ++ + L LFRQM I+P+ ++ AC++L L + IH ++
Sbjct: 273 WSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMK 332
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++ ++KC D A +IF+ M R+V SWN M+VG GF + L
Sbjct: 333 RNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALE 392
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
F M + I D + +G+ A HA ++ + +H F GV
Sbjct: 393 CFTQMEMERIPMDDLLFLGVLMACSHANLVT--EGLHIFNQMKGV 435
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 282/584 (48%), Gaps = 49/584 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I+ V+K L +F M P+ TFP + KAC+ +S L +IHG
Sbjct: 151 WNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRA 210
Query: 81 VKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
+ S F + C ++ A ++F+ M R V SWN M+ G+ Q G E L
Sbjct: 211 LVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEAL 270
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+F +M ++ D T++ + + K L L VH + + V N + Y
Sbjct: 271 AVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMY 330
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
++C + A LVF E + + V++W SM+ G +L M +G + T
Sbjct: 331 SRCGGIDEASLVFA--ETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ SLLS+ C +L MY+KC + + +F
Sbjct: 389 LASLLSA--CA--------------------------SLCYMYAKCNAVSYSFQVFAKTS 420
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ V W A++SG EA+ LF +M + T S+I L+
Sbjct: 421 KKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMN 480
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP--EKIVVSWTTMIAGCALN 424
+Y G + V LIDMYSKCGS+ A ++F +P EK ++ W+ +IAG ++
Sbjct: 481 LHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 540
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G A+ LF+Q++ ++PN +TF +VL AC+H G ++ G +++ +Y + +P
Sbjct: 541 GHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDG--LTLFKYMIENYPSSPLP 598
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY+C+ DLLGR G+L EA D ++SMP + + IWG LL AC IH N+E+GE A LF+
Sbjct: 599 NHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFE 658
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
LEP S Y+ +AN YA GRW N+R +M + ++K P QS
Sbjct: 659 LEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQS 702
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 148/276 (53%), Gaps = 9/276 (3%)
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK--FDDSLNFYRHMMYNG-FR 241
SYA C + +A +F + + ++ WN+++ Y DK D+L + M+ +G F
Sbjct: 126 SYAFCGCVPLARKLFDDLSDP--SLFLWNAIIK--MYVDKGFHFDALRVFDSMICSGKFW 181
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D T ++ + L G L+H + GF ++ V N+L++MY CG + AR +
Sbjct: 182 PDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQV 241
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ + R+ VSW MISG+ Q G +EAL +F +M A PD T++S + CG L
Sbjct: 242 FNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKEL 301
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
ELG L++ + V NAL+DMYS+CG I +A +F EK V++WT+MI G
Sbjct: 302 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGY 361
Query: 422 ALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQAC 456
+NG AL L M+LD + PN VT ++L AC
Sbjct: 362 IMNGNAKSALALC-PAMQLDGVVPNAVTLASLLSAC 396
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 221/497 (44%), Gaps = 56/497 (11%)
Query: 73 SQMIHGHIVKS-----------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
++++HGH + S + C + A K+FD+++ + WNA++
Sbjct: 98 TKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKM 157
Query: 116 FAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ GF + LR+F +M G D T + +A L++ +H + G +
Sbjct: 158 YVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSS 217
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
++ V N+ ++ Y C + +A VF + + R+VVSWN+M++G + +++L +
Sbjct: 218 NMFVQNSLLAMYMNCGKVGLARQVFNVMLK--RSVVSWNTMISGWFQNGRPEEALAVFNS 275
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
MM D T+VS L S + L G VH + V N L+ MYS+CG
Sbjct: 276 MMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGG 335
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
ID A ++F ++ ++WT+MI+GY G+ AL L AM+ G +P+ VT+ S++S
Sbjct: 336 IDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSA 395
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C +L MY+KC ++ + ++F +K V W
Sbjct: 396 CA----------------------------SLCYMYAKCNAVSYSFQVFAKTSKKRTVPW 427
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+++G N EA+ LF ++ ++ N TF +V+ A L++ +++ Y
Sbjct: 428 NALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQ--VMNLHSYL 485
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTLLCACKIHLNIE 533
+ + ++ + + D+ + G L A +P K D +W L+ +H + E
Sbjct: 486 VRS-GFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 544
Query: 534 IGEYVAYCLFKLEPHSA 550
A LF HS
Sbjct: 545 ----TAVLLFNQMVHSG 557
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 195/445 (43%), Gaps = 67/445 (15%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ I + L +F M +EP++ T +C L +L +H
Sbjct: 249 SVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVH 308
Query: 78 GHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ K+ + +C +D A +F E +DV +W +M+ G+ G +
Sbjct: 309 KLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAK 368
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ L L M+L G+ + VT+ L +S C +
Sbjct: 369 SALALCPAMQLDGVVPNAVTLASL----------------------------LSACASLC 400
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YAKC+ + + VF ++ RT V WN++++G + + +++ ++ M+ +
Sbjct: 401 YMYAKCNAVSYSFQVFAKTSKK-RT-VPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 458
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T S++ ++ L Q +HS+ + GF ++VI LI MYSKCG +D A +FD
Sbjct: 459 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 518
Query: 304 GICDRTR--VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG-- 359
I ++ + + W+ +I+GY G + A+ LF M +G P+ +T S++ C G
Sbjct: 519 EIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLV 578
Query: 360 --ALELGKW-FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WT 415
L L K+ +NY S N C ++D+ + G + +A +L ++P + S W
Sbjct: 579 DDGLTLFKYMIENYPSSP--LPNHYTC--VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWG 634
Query: 416 TMIAGCALNGEFVEALDLFHQLMEL 440
++ C L HQ +EL
Sbjct: 635 ALLGAC-----------LIHQNVEL 648
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 296/577 (51%), Gaps = 18/577 (3%)
Query: 55 LTFPFIAKACAKLSD-------LIYSQMIHGHIVKSPFVK------CDRLDCAYKIFDEM 101
++ F+ C +S L+ + ++H + S + L+ A K+F +M
Sbjct: 12 ISVDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQM 71
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
D N M+ G+A+ + L+Y M G+ D T + A + L +
Sbjct: 72 QNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGR 131
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
H + G +D+ V N I Y C A VF E +R VV+WN M+
Sbjct: 132 RFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVF--DESTVRDVVTWNIMINAHLN 189
Query: 222 GDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+ + + M + R D T+VSL+ + L +G+ +HS+ G D ++
Sbjct: 190 KGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLR 249
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V N ++ MY KC DI+SA+ +F+ I ++ +SWT+M+SG A+ G EAL LF M+
Sbjct: 250 VNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNK 309
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D +T++ ++S C Q+GAL+ GK+ + ++++ AL+DMY+KCGSI A
Sbjct: 310 IELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLAL 369
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
++F + + V +W +I G A++G +A+ LF Q+ L P+ VTF+A+L AC+H G
Sbjct: 370 QVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAG 429
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+++G A+ Q P ++HY C+ DLL R K+ +AL F+++MPIK+++ +W
Sbjct: 430 LVDEGLAM--FQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWA 487
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
TLL AC+ + ++ E + + +LEP S YV ++N YA +WD +R MK
Sbjct: 488 TLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKG 547
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
++K PG S +NG F A DR H ++E Y +++
Sbjct: 548 IEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 584
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 208/436 (47%), Gaps = 19/436 (4%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N+ IR ++ + L+ M + + +N T+PF+ ACA+L + + H ++K
Sbjct: 80 NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 83 SPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ F C CA +FDE VRDV +WN M+ G E L
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199
Query: 129 FYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
M +L ++ D VT++ L A +L K +HS+ +G+D ++ V N + Y
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYC 259
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KCDD++ A+ VF I E + V+SW SM++G F ++L ++ M N LD T+
Sbjct: 260 KCDDIESAQEVFNRIRE--KDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITL 317
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
V +LS+ AL QG+ +H + + D+ + L+ MY+KCG ID A +F +
Sbjct: 318 VGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRV 377
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
R +W A+I G A G ++A+ LF ME +PD VT ++++ C +G ++ G
Sbjct: 378 RNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAM 437
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNG 425
F ++ + ++D+ + + DA +P K V W T++ C G
Sbjct: 438 FQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGG 497
Query: 426 EFVEALDLFHQLMELD 441
F A + +++EL+
Sbjct: 498 HFDLAEKIGRRVIELE 513
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 3 VSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
+ S NRI R + W S + + L LF++M+ N IE + +T +
Sbjct: 264 IESAQEVFNRI-REKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLS 322
Query: 63 ACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVAS 108
ACA+ L + IH I K + KC +D A ++F M VR+V +
Sbjct: 323 ACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT 382
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
WNA++ G A G E+ + LF M + D VT + L A HA
Sbjct: 383 WNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHA 428
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 168/491 (34%), Positives = 259/491 (52%), Gaps = 13/491 (2%)
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
++ L+ M L+G+ D T+ L +A + +H+ I G+ +++ V NT +
Sbjct: 121 HIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLM 180
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
YA ++ E VF + ++SW +++ + +++ + M R+
Sbjct: 181 RFYAVSGFIEAVEKVFD--QGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTADRMT 238
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL--DVSVINTLISMYSKCGDIDSARVL 301
+ V+S S G+ + ++ H+ FD+ DV + N L+ MY KCG AR L
Sbjct: 239 LVVVLSACSQL---GDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQL 295
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F + + VSW +MISG A +G EAL +F M+ G PD VT++ +++ C G L
Sbjct: 296 FHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDL 355
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
ELGKW +Y +K + V NAL+DMY+KCGSI A +F A+ K V S+T MI G
Sbjct: 356 ELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGF 415
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A++G+ AL +F ++ + +RP+ VT + VL AC+H G LE+G + D Y+
Sbjct: 416 AMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRR----HFQDMSRLYH 471
Query: 482 --PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P+ +HY CM DLLGR G + EA F MPI DA +WG+LL ACKIH +E+GE V
Sbjct: 472 LQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVI 531
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L ++EP Y+ M+N Y+ RW R MK+N +KK PG S ++G F
Sbjct: 532 QKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEF 591
Query: 600 TAEDRYHAESE 610
++ H +S
Sbjct: 592 RKGEKSHPKSR 602
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 205/424 (48%), Gaps = 25/424 (5%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP-----FVK-------- 87
L+RQM + P+ T P++ KAC++ I + IH H +K+ FVK
Sbjct: 125 LYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYA 184
Query: 88 -CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
++ K+FD+ D+ SW ++ +++MG+ + F+ M AD +T++
Sbjct: 185 VSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCT---ADRMTLVV 241
Query: 147 LTQAAIHAKHLSLLKSVHSFGIH--IGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ A +L K + ++ H V +DV + N + Y KC +A +F +
Sbjct: 242 VLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMP- 300
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
++ +VSWNSM++G + F ++L+ +R M G + D T+V +L+S L G+
Sbjct: 301 -VKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGK 359
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VHS+ D V N L+ MY+KCG ID A ++F + + S+TAMI G+A G
Sbjct: 360 WVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHG 419
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVC 383
D AL +F M G PD VT++ ++S C +G LE G + F + + L+
Sbjct: 420 KADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHY 479
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDL 442
++D+ + G I +A +P S W +++ C ++ + + +L+E++
Sbjct: 480 GCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEME- 538
Query: 443 RPNR 446
P R
Sbjct: 539 -PER 541
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 153/301 (50%), Gaps = 18/301 (5%)
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
T + F + YR M+ G D T+ LL + A ++ +H+H I G ++
Sbjct: 114 TSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNL 173
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V NTL+ Y+ G I++ +FD +SWT +I Y++ G EA+ FF M
Sbjct: 174 FVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCT 233
Query: 340 GELPDLVTVLSMISGCGQSGALELGK----WFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
+ LV VL S C Q G LGK + D++ + +V + NAL+DMY KCG
Sbjct: 234 ADRMTLVVVL---SACSQLGDFTLGKKILAYMDHHLFD--VHSDVFLGNALLDMYLKCGQ 288
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
AR+LF+ +P K +VSW +MI+G A G F EAL +F ++ + L+P+ VT + VL +
Sbjct: 289 PHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNS 348
Query: 456 CTHTGFLEKG-WAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPI 512
C + G LE G W S Y DK + + D Y + + D+ + G + +A Q+M
Sbjct: 349 CANLGDLELGKWVHS---YIDKN---HMKADGYVANALVDMYAKCGSIDQAFMVFQAMKC 402
Query: 513 K 513
K
Sbjct: 403 K 403
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ + L +FR+M+ ++P+++T + +CA L DL + +H +I
Sbjct: 307 WNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYID 366
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K+ + KC +D A+ +F M +DV S+ AM+VGFA G + L
Sbjct: 367 KNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALA 426
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
+F M +G++ D VT++G+ A HA
Sbjct: 427 IFSEMPRMGVRPDHVTLVGVLSACSHA 453
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 304/628 (48%), Gaps = 72/628 (11%)
Query: 5 SLPPRLNRIYRSSTINQ---------------WNSQIREAVNKNEAHKTLLLFRQMKQND 49
SL +++ + R+ IN+ WN I V + E K LF +M D
Sbjct: 59 SLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRD 118
Query: 50 IEPNNLTF--------PFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEM 101
I NL F+ +A + + + + + S + K +D A ++F+EM
Sbjct: 119 IVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEM 178
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
R+V SWNAM+ G+ G +E + F M + + GL Q + K + +
Sbjct: 179 PERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQ---NDKLVEAER 235
Query: 162 SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF--------CGIEERLRTVVSWN 213
+ +G ++G V NT I+ Y + A +F CG R V+SWN
Sbjct: 236 ILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRR--NVISWN 293
Query: 214 SM----------VAGCTYGDKFDDSLNFYRHMMYNGFR--LDVTTVVSLLSSFVCPEALV 261
SM V+ DK + F + M +G+ LD+ +L S P+ L
Sbjct: 294 SMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLS 353
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
N +IS +S+ G + A LF I +++ VSW +MISGY
Sbjct: 354 W--------------------NMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYE 393
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ D A+ +F M+ G+ PD T+ S++S C L LG + D +
Sbjct: 394 KNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIAD-LP 452
Query: 382 VCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+ N+L+ MYS+CG+I +AR +F + ++ V+SW MI G A +G EAL LF + +
Sbjct: 453 INNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQC 512
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
+++P+ +TF++VL AC H G +E+G + GI P+++HY+ + D++GR G+L
Sbjct: 513 NVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIK--PQVEHYAALVDIIGRHGQL 570
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
+EA+ + SMP + D +WG LL ACK+H N+E+ A L KL+P S+APYV + N Y
Sbjct: 571 EEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMY 630
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQS 588
A GRWD A +RTMM++N V+K G S
Sbjct: 631 ADVGRWDDAAEMRTMMEKNNVQKDAGYS 658
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 267/508 (52%), Gaps = 15/508 (2%)
Query: 91 LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA 150
L A +F+ + V WN+M+ G++ + L + M G D+ T + +A
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ + VH F + G + ++ V + Y C ++ VF I + VV
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW--NVV 174
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+W S+++G ++F D++ +R M NG + + T +V LL + + +V G+ H
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Query: 271 IHYGFD--------LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GFD +V + +LI MY+KCGD+ +AR LFDG+ +RT VSW ++I+GY+Q
Sbjct: 235 QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQ 294
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVM 381
GD +EAL +F M G PD VT LS+I G +LG+ Y G +KD +
Sbjct: 295 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 354
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL- 440
VC AL++MY+K G A++ F L +K ++WT +I G A +G EAL +F ++ E
Sbjct: 355 VC-ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKL 500
+ P+ +T+L VL AC+H G +E+G D G+ P ++HY CM D+L R G+
Sbjct: 414 NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE--PTVEHYGCMVDILSRAGRF 471
Query: 501 KEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKY 560
+EA V++MP+K + IWG LL C IH N+E+ + + + + E + YV ++N Y
Sbjct: 472 EEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIY 531
Query: 561 ALGGRWDGVANIRTMMKRNQVKKFPGQS 588
A GRW V IR MK +V K G S
Sbjct: 532 AKAGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 228/477 (47%), Gaps = 39/477 (8%)
Query: 4 SSLPPRLNRIYRSSTINQ--------WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNL 55
++ P +N Y S WNS IR N K L+ +++M + P+
Sbjct: 49 TTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYF 108
Query: 56 TFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEM 101
TFP++ KAC+ L D+ + +HG +VK+ F + C ++ ++F+++
Sbjct: 109 TFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 102 AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK 161
+V +W +++ GF + + F M+ G++A+ ++ L A K + K
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 162 SVHSFGIHIGVDA--------DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
H F +G D +V + + I YAKC DL+ A +F G+ E RT+VSWN
Sbjct: 229 WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPE--RTLVSWN 286
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
S++ G + +++L + M+ G D T +S++ + + G+ +H++
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GF D +++ L++MY+K GD +SA+ F+ + + ++WT +I G A G +EAL +F
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 334 FAMEAAGE-LPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYS 391
M+ G PD +T L ++ C G +E G ++F GL+ V ++D+ S
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 392 KCGSIGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
+ G +A L +P K V+ W ++ GC ++ E L+L ++ + P +
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH----ENLELTDRIRSMVAEPEEL 519
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 178/627 (28%), Positives = 316/627 (50%), Gaps = 23/627 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ I + ++L F M+ E N+ T + C+ + +L + + IHG
Sbjct: 363 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 422
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+VK + + + R + A +F M RD+ SWN+M+ + Q G +
Sbjct: 423 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 482
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L++ + +G + VT A + + L K VH+ I G + V N ++
Sbjct: 483 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVT 542
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y K + A+ V + + R V+WN+++ G ++ ++++ Y+ + G +
Sbjct: 543 MYGKLGMMMEAKKVLQTMPQPDR--VTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 600
Query: 245 TTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+VS+L + P+ L++ G +H+H + GF+ D V N+LI+MY+KCGD++S+ +FD
Sbjct: 601 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 660
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
G+ +++ ++W AM++ A G +EAL++F M G D + ++ LE
Sbjct: 661 GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEE 720
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ G + ++ V NA +DMY KCG + D ++ + +SW +I+ A
Sbjct: 721 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR 780
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN-- 481
+G F +A + FH++++L +P+ VTF+++L AC H G +++G A YD +
Sbjct: 781 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAY----YDSMTREFGVF 836
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++H C+ DLLGR G+L A F++ MP+ + W +LL AC+IH N+E+ A
Sbjct: 837 PGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEH 896
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +L+P + YV +N A G+W+ V N+R M N +KK P S + K +F
Sbjct: 897 LLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGM 956
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
++YH ++ L L ++E Y
Sbjct: 957 GEKYHPQASRISAKLGELMKMTKEAGY 983
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 271/582 (46%), Gaps = 25/582 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + + + L ++++M+Q + N TF + +C L D + + GHI+
Sbjct: 265 WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII 324
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ S F ++ A +FD M D+ SWNAM+ +A G LR
Sbjct: 325 QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 384
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F+ MR + + + T+ L +L + +H + +G+D++V +CNT ++ Y+
Sbjct: 385 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 444
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ + AELVF + E R ++SWNSM+A K D L ++ G ++ T
Sbjct: 445 EAGRSEDAELVFQAMTE--RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 502
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L++ PE L++ ++VH+ I GF + V N L++MY K G + A+ + +
Sbjct: 503 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 562
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC-GQSGALELGKW 366
RV+W A+I G+A+ + +EA++ + + G + +T++S++ C L+ G
Sbjct: 563 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 622
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G + + V N+LI MY+KCG + + +F L K ++W M+A A +G
Sbjct: 623 IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 682
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EAL +F ++ + + ++ +F L A + LE+G + + + + +L
Sbjct: 683 GEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIK---LGFESDLHV 739
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
+ D+ G+ G++ + L + PI W L+ A H + + + KL
Sbjct: 740 TNAAMDMYGKCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLG 798
Query: 547 PHS-AAPYVEMANKYALGGRWD-GVANIRTMMKRNQVKKFPG 586
P +V + + GG D G+A +M + V FPG
Sbjct: 799 PKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV--FPG 838
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 215/444 (48%), Gaps = 15/444 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K ++ A +FDEM R+ ASW+ ML G+ ++G E + LF M +G++ + V
Sbjct: 139 YSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMV 198
Query: 145 MGLTQAAIHAKHLSLLK-SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
L A + +++ VH F + G+ DV V + Y + A+ +F +
Sbjct: 199 ASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP 258
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+ VVSW S++ G + + LN Y+ M G + T ++ SS E V G
Sbjct: 259 DH--NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 316
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
V H I YGF+ VSV N+LISM+S ++ A +FD + + +SW AMIS YA
Sbjct: 317 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 376
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G E+LR F M + T+ S++S C L+ G+ GL NV +C
Sbjct: 377 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 436
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
N L+ +YS+ G DA +F A+ E+ ++SW +M+A +G+ ++ L + +L+++
Sbjct: 437 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 496
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAIS----IIQYDDKGISYNPELDHYSCMADLLGRKGK 499
N VTF + L AC++ L + + + + D I N + + G+ G
Sbjct: 497 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGN-------ALVTMYGKLGM 549
Query: 500 LKEALDFVQSMPIKSDAGIWGTLL 523
+ EA +Q+MP + D W L+
Sbjct: 550 MMEAKKVLQTMP-QPDRVTWNALI 572
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 216/453 (47%), Gaps = 21/453 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK---LSDLIYSQMIHG 78
W++ + V + + LF QM +EPN + AC++ ++D + +HG
Sbjct: 163 WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ--VHG 220
Query: 79 HIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+VK+ + + A K+F+EM +V SW +++VG++ G
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
VL ++ MR G+ + T +T + + L V I G + VSV N+ IS
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 340
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
++ ++ A VF + E ++SWN+M++ + +SL + M + +
Sbjct: 341 MFSSFSSVEEACYVFDHMNE--CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNS 398
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TT+ SLLS + L GR +H + G D +V + NTL+++YS+ G + A ++F
Sbjct: 399 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 458
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +R +SW +M++ Y Q G + L++ + G++ + VT S ++ C L
Sbjct: 459 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 518
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K G D ++V NAL+ MY K G + +A+++ +P+ V+W +I G A N
Sbjct: 519 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAEN 578
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
E EA+ + + E + N +T ++VL AC+
Sbjct: 579 EEPNEAVKAYKLIREKGIPANYITMVSVLGACS 611
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 124/229 (54%), Gaps = 9/229 (3%)
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L F + + G+ +H+ I +L + NTLI+MYSK G+I+ AR +FD + R
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDN 369
SW+ M+SGY + G +EA+ LF M G P+ V S+I+ C +SG + + G
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+ G+ +V V AL+ Y G + +A++LF +P+ VVSWT+++ G + +G E
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK---GWAI--SIIQY 473
L+++ ++ + + N+ TF V +C G LE G+ + IIQY
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQY 326
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 3/289 (1%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
K++H+F I V+ + NT I+ Y+K +++ A VF E R R SW++M++G
Sbjct: 114 KALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF--DEMRHRNEASWSTMLSGYV 171
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV-QGRLVHSHGIHYGFDLDV 279
+++++ + M G + V SL+++ + +G VH + G DV
Sbjct: 172 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 231
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V L+ Y G + +A+ LF+ + D VSWT+++ GY+ G+ E L ++ M
Sbjct: 232 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 291
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G + T ++ S CG LG + G +D+V V N+LI M+S S+ +A
Sbjct: 292 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 351
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
+F + E ++SW MI+ A +G E+L FH + L N T
Sbjct: 352 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400
>gi|4544411|gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana]
gi|91806147|gb|ABE65802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 582
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 274/563 (48%), Gaps = 25/563 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
LF M Q P+ T + C + + + +HG KS +
Sbjct: 28 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 87
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC L A +F EM + SWN M+ ++Q G E + +F NM ++ VT++
Sbjct: 88 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN 147
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L A H H + +H + G+ D+SV + + +Y++C L AE ++ ++
Sbjct: 148 LLSA--HVSH----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD- 200
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++V S+V+ D ++ ++ ++D +V +L + G +
Sbjct: 201 -SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 259
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + I G V+N LI+MYSK D+++ LF+ + + +SW ++ISG Q G
Sbjct: 260 HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRA 319
Query: 327 DEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
A +F M G LPD +T+ S+++GC Q L LGK Y ++ VC A
Sbjct: 320 STAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTA 379
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LIDMY+KCG+ A +F ++ +W +MI+G +L+G AL + ++ E L+P+
Sbjct: 380 LIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPD 439
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TFL VL AC H GF+++G + GIS P L HY+ M LLGR EAL
Sbjct: 440 EITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS--PTLQHYALMVGLLGRACLFTEALY 497
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
+ M IK D+ +WG LL AC IH +E+GEYVA +F L+ + YV M+N YA
Sbjct: 498 LIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAM 557
Query: 566 WDGVANIRTMMKRNQVKKFPGQS 588
WD V +R MMK N + G S
Sbjct: 558 WDDVVRVRNMMKDNGYDGYLGVS 580
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 218/462 (47%), Gaps = 31/462 (6%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M RD WNA++ G+++ G+ + +LF M G T++ L +S
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+SVH G++ D V N IS Y+KC +L AE++F E + ++ VSWN+M+ +
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF--REMKDKSTVSWNTMIGAYS 118
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
++++ +++M + T+++LLS+ V E L H + G D+S
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDIS 172
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V+ +L+ YS+CG + SA L+ + V T+++S YA+KGD+D A+ F
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D V ++ ++ GC +S +++G YA GL +V N LI MYSK +
Sbjct: 233 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 292
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHT 459
LF L E ++SW ++I+GC +G A ++FHQ+M L P+ +T ++L C+
Sbjct: 293 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 352
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAG 517
L G + + N E +++ C A D+ + G +A +S+ A
Sbjct: 353 CCLNLG-----KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA- 406
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
W +++ Y L L+ + + Y+EM K
Sbjct: 407 TWNSMIS--------------GYSLSGLQHRALSCYLEMREK 434
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 20/260 (7%)
Query: 12 RIYRSS---TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+Y S+ +I S + K + ++ F + +Q ++ + + I C K S
Sbjct: 192 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 251
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ +HG+ +KS + K D ++ +F+++ + SWN+++
Sbjct: 252 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 311
Query: 115 GFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G Q G +F+ M L G+ D +T+ L L+L K +H + + +
Sbjct: 312 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 371
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ VC I YAKC + AE VF I + +WNSM++G + +L+ Y
Sbjct: 372 NENFVCTALIDMYAKCGNEVQAESVFKSI--KAPCTATWNSMISGYSLSGLQHRALSCYL 429
Query: 234 HMMYNGFRLDVTTVVSLLSS 253
M G + D T + +LS+
Sbjct: 430 EMREKGLKPDEITFLGVLSA 449
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ + + WNS I V A +F QM + P+ +T + C++L L
Sbjct: 299 QETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLG 358
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +HG+ +++ F KC A +F + A+WN+M+ G++
Sbjct: 359 KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLS 418
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G L + MR G++ D +T +G+ A H
Sbjct: 419 GLQHRALSCYLEMREKGLKPDEITFLGVLSACNHG 453
>gi|116831059|gb|ABK28484.1| unknown [Arabidopsis thaliana]
Length = 583
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 274/563 (48%), Gaps = 25/563 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
LF M Q P+ T + C + + + +HG KS +
Sbjct: 28 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 87
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
KC L A +F EM + SWN M+ ++Q G E + +F NM ++ VT++
Sbjct: 88 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN 147
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L A H H + +H + G+ D+SV + + +Y++C L AE ++ ++
Sbjct: 148 LLSA--HVSH----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD- 200
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++V S+V+ D ++ ++ ++D +V +L + G +
Sbjct: 201 -SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 259
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + I G V+N LI+MYSK D+++ LF+ + + +SW ++ISG Q G
Sbjct: 260 HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRA 319
Query: 327 DEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
A +F M G LPD +T+ S+++GC Q L LGK Y ++ VC A
Sbjct: 320 STAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTA 379
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
LIDMY+KCG+ A +F ++ +W +MI+G +L+G AL + ++ E L+P+
Sbjct: 380 LIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPD 439
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TFL VL AC H GF+++G + GIS P L HY+ M LLGR EAL
Sbjct: 440 EITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS--PTLQHYALMVGLLGRACLFTEALY 497
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
+ M IK D+ +WG LL AC IH +E+GEYVA +F L+ + YV M+N YA
Sbjct: 498 LIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAM 557
Query: 566 WDGVANIRTMMKRNQVKKFPGQS 588
WD V +R MMK N + G S
Sbjct: 558 WDDVVRVRNMMKDNGYDGYLGVS 580
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 218/462 (47%), Gaps = 31/462 (6%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M RD WNA++ G+++ G+ + +LF M G T++ L +S
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+SVH G++ D V N IS Y+KC +L AE++F E + ++ VSWN+M+ +
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF--REMKDKSTVSWNTMIGAYS 118
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
++++ +++M + T+++LLS+ V E L H + G D+S
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDIS 172
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V+ +L+ YS+CG + SA L+ + V T+++S YA+KGD+D A+ F
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
D V ++ ++ GC +S +++G YA GL +V N LI MYSK +
Sbjct: 233 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 292
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRVTFLAVLQACTHT 459
LF L E ++SW ++I+GC +G A ++FHQ+M L P+ +T ++L C+
Sbjct: 293 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 352
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDAG 517
L G + + N E +++ C A D+ + G +A +S+ A
Sbjct: 353 CCLNLG-----KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA- 406
Query: 518 IWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANK 559
W +++ Y L L+ + + Y+EM K
Sbjct: 407 TWNSMIS--------------GYSLSGLQHRALSCYLEMREK 434
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 20/260 (7%)
Query: 12 RIYRSS---TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
R+Y S+ +I S + K + ++ F + +Q ++ + + I C K S
Sbjct: 192 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 251
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+ +HG+ +KS + K D ++ +F+++ + SWN+++
Sbjct: 252 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 311
Query: 115 GFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD 173
G Q G +F+ M L G+ D +T+ L L+L K +H + + +
Sbjct: 312 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 371
Query: 174 ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYR 233
+ VC I YAKC + AE VF I + +WNSM++G + +L+ Y
Sbjct: 372 NENFVCTALIDMYAKCGNEVQAESVFKSI--KAPCTATWNSMISGYSLSGLQHRALSCYL 429
Query: 234 HMMYNGFRLDVTTVVSLLSS 253
M G + D T + +LS+
Sbjct: 430 EMREKGLKPDEITFLGVLSA 449
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ + + WNS I V A +F QM + P+ +T + C++L L
Sbjct: 299 QETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLG 358
Query: 74 QMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
+ +HG+ +++ F KC A +F + A+WN+M+ G++
Sbjct: 359 KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLS 418
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G L + MR G++ D +T +G+ A H
Sbjct: 419 GLQHRALSCYLEMREKGLKPDEITFLGVLSACNHG 453
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 186/617 (30%), Positives = 306/617 (49%), Gaps = 30/617 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY---SQMIHGHIVKSP------------- 84
+ ++M PN F +AC + +++ + +HG+ +++
Sbjct: 88 VLKEMIFEGFLPNRFAFGSAIRACQE--SMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLI 145
Query: 85 --FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ-ADF 141
+ KC +D A +F M +D SWN+M+ G Q E+ ++ + +MR G+ ++F
Sbjct: 146 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 205
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
+ L+ A L L + H GI +G+D DVSV NT ++ YA+ L + VF
Sbjct: 206 ALISALSSCASLGCIL-LGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSW 264
Query: 202 IEERLRTVVSWNSMVAGCT-YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
+ ER + VSWN+++ G +++ + MM G+ + T ++LL++
Sbjct: 265 MLERDQ--VSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 322
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT-RVSWTAMISG 319
+H+ + Y D ++ N L++ Y K G++++ +F + +R VSW +MISG
Sbjct: 323 KLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 382
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
Y L +A+ L + M G+ D T +++S C LE G A L+ +
Sbjct: 383 YIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESD 442
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V++ +AL+DMYSKCG I A F +P + + SW +MI+G A +G AL LF ++
Sbjct: 443 VVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKL 502
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
P+ +TF+ VL AC+H G +++G+ + G+ P ++HYSCM DLLGR G+
Sbjct: 503 SGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLV--PRVEHYSCMVDLLGRAGE 560
Query: 500 LKEALDFVQSMPIKSDAGIWGTLLCAC--KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
L + +F+ MPIK + IW T+L AC E+G A LF ++P +A YV ++
Sbjct: 561 LDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLS 620
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N YA GG+W+ +A R M+ VKK G S + F A D H E L Y L
Sbjct: 621 NMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLK 680
Query: 618 CLALHSREEAYSSHLKW 634
L R+ Y +K+
Sbjct: 681 ELDKKIRDAGYVPQIKF 697
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 207/438 (47%), Gaps = 29/438 (6%)
Query: 92 DC--AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
DC A K+FDEM R+ +W ++ G+ Q G E+ + M G F+
Sbjct: 50 DCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEG----FLPNRFAFG 105
Query: 150 AAIHAKHLSLL-----KSVHSFGIHIGV-DADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+AI A S+L + VH + I G+ DA V+V N I+ YAKC D+ A VF +
Sbjct: 106 SAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMV 165
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+ + VSWNSM+ G F+D++ Y M G ++S LSS ++ G
Sbjct: 166 D--KDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLG 223
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
+ H GI G D+DVSV NTL+++Y++ + + +F + +R +VSW +I A
Sbjct: 224 QQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADS 283
Query: 324 G-DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G + EA+ +F M AG P+ VT +++++ +L +KD+ +
Sbjct: 284 GASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAI 343
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
NAL+ Y K G + + E+F + E+ VSW +MI+G N +A+DL +M+
Sbjct: 344 ENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRG 403
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGW-----AISIIQYDDKGISYNPELDHYSCMADLLGR 496
R + TF VL AC LE G AI D I S + D+ +
Sbjct: 404 QRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIG--------SALVDMYSK 455
Query: 497 KGKLKEALDFVQSMPIKS 514
G++ A F MP+++
Sbjct: 456 CGRIDYASRFFNLMPVRN 473
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 199/428 (46%), Gaps = 21/428 (4%)
Query: 21 QWNSQIREAVNKNEAHKTLLL-FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WNS I +++N+ + + + M++ + P+N +CA L ++ Q HG
Sbjct: 171 SWNSMI-TGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGE 229
Query: 80 IVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF-LEN 124
+K + + + RL K+F M RD SWN ++ A G +
Sbjct: 230 GIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSE 289
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ +F M G + VT + L L +H+ + V D ++ N ++
Sbjct: 290 AIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLA 349
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y K +++ E +F + ER R VSWNSM++G + + +++ MM G RLD
Sbjct: 350 CYGKSGEMENCEEIFSRMSER-RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDC 408
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T ++LS+ L G VH+ I + DV + + L+ MYSKCG ID A F+
Sbjct: 409 FTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNL 468
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R SW +MISGYA+ G D ALRLF M+ +G+LPD +T + ++S C G ++ G
Sbjct: 469 MPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 528
Query: 365 -KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCA 422
++F + GL V + ++D+ + G + +P K ++ W T++ C
Sbjct: 529 FEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACC 588
Query: 423 L-NGEFVE 429
NG E
Sbjct: 589 RGNGRKTE 596
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 191/378 (50%), Gaps = 30/378 (7%)
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
HL++LK G D+D+ +CNT I+ Y + D A +F + + R V+W +
Sbjct: 23 HLNVLKH--------GFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPD--RNGVTWACL 72
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV---QGRLVHSHGIH 272
++G T +D+ + M++ GF + S + + C E+++ +GR VH + I
Sbjct: 73 ISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRA--CQESMLWRRKGRQVHGYAIR 130
Query: 273 YGF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
G D V+V N LI+MY+KCGDID AR +F + D+ VSW +MI+G Q ++A++
Sbjct: 131 TGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVK 190
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+ +M G +P ++S +S C G + LG+ GL +V V N L+ +Y+
Sbjct: 191 SYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYA 250
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRPNRVTFL 450
+ + + +++F + E+ VSW T+I A +G V EA+++F ++M PNRVTF+
Sbjct: 251 ETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFI 310
Query: 451 AVLQACT--HTGFLEKGWAISIIQY---DDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+L + T L I++Y DD I N L Y G+ G+++ +
Sbjct: 311 NLLATVSSLSTSKLSHQIHALILKYNVKDDNAIE-NALLACY-------GKSGEMENCEE 362
Query: 506 FVQSMPIKSDAGIWGTLL 523
M + D W +++
Sbjct: 363 IFSRMSERRDEVSWNSMI 380
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 7/223 (3%)
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
L H + + +GFD D+ + NTLI++Y + GD SAR LFD + DR V+W +ISGY Q G
Sbjct: 21 LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL-GKWFDNYACSGGLKD-NVMV 382
++A + M G LP+ S I C +S G+ YA GL D V V
Sbjct: 81 MPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAV 140
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N LI+MY+KCG I AR +F + +K VSW +MI G N F +A+ ++ + + L
Sbjct: 141 GNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGL 200
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELD 485
P+ ++ L +C G + G Q +GI ++D
Sbjct: 201 MPSNFALISALSSCASLGCILLGQ-----QTHGEGIKLGLDMD 238
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/622 (28%), Positives = 301/622 (48%), Gaps = 27/622 (4%)
Query: 7 PPRLNR----IYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAK 62
PP L R + S T N+ +R + + +LL +++ + + TF + +
Sbjct: 49 PPGLARDLFDEFPSPTPRLANALLRAHIRARQWRAAILLGPRLR---VRLDGFTFSLLLR 105
Query: 63 ACAKLSDLIYSQMIHGHIVKS---------------PFVKCDRLDCAYKIFDEMAVRDVA 107
ACA L L + + +H ++S + +C + A + + D+
Sbjct: 106 ACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIV 165
Query: 108 SWNAMLVGFAQMGFLENVLRLF-YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSF 166
+++ G+ Q G E L F N+ G+ VT++ AA H+ ++ H++
Sbjct: 166 LRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAY 225
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ + D+++ NT +S Y K D + + +F G+ +R V++W+ M+ G
Sbjct: 226 VVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDR--DVITWSCMIKGYVQHGDAH 283
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+ L YR M+ + + T+VS+L + +G+ VH + G +L+V V L+
Sbjct: 284 EGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATALV 343
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
MY KC + A LF + + V+W A+I G Q E+L +F M +PD +
Sbjct: 344 DMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAI 403
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
T++ +++ C + G L Y G +N V AL+D+YSKCG I A +F
Sbjct: 404 TMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEGT 463
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
EK +V W +MIAG +G EA+ L+ +++ ++PN VTF++VL AC+H+G +++G
Sbjct: 464 TEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEG- 522
Query: 467 AISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCAC 526
I I + P +H S M DLLGR G+L+EA+ F++ M ++ A W LL AC
Sbjct: 523 -IQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAAC 581
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
+ H N ++ + A L KL+P Y + N YA +W+ V + R M++ ++K PG
Sbjct: 582 REHNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVKDTRDMVRGRDLRKVPG 641
Query: 587 QSLFHINGKTCTFTAEDRYHAE 608
S + TF A +R H +
Sbjct: 642 YSSVEVGNLVHTFIAGERTHQD 663
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 290/586 (49%), Gaps = 25/586 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ---NDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
W + + V E+ L +M + + +PN T AC L DL+ + +HG
Sbjct: 179 WTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHG 238
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+VK S + KC AY+ F E+ +D+ SW +M+ +A+ G + +
Sbjct: 239 LVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSD 298
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+R F+ M + D + + + ++ + K+ H I D V N+ +S
Sbjct: 299 CVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLS 358
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y K L AE +F + ++ WN M+ G K + +R M Y G R +
Sbjct: 359 MYCKFGMLSFAERLF---QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSES 415
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+VS ++S + GR +H + I D +SV N+LI MY KC ++ + +F+
Sbjct: 416 VGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR 475
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+R + W A+IS + +EA+ LF M + P+ T++ ++S C LE G
Sbjct: 476 -SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKG 534
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ Y G K N+ + AL+DMY+KCG + +RE+F ++ EK V+ W MI+G +N
Sbjct: 535 ERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMN 594
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G A+++F+ + E +++PN +TFL++L AC H G +E+G + + S P L
Sbjct: 595 GYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM---QSYSVKPNL 651
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
HY+CM DLLGR L+EA + V SMPI D G+WG LL ACK H IE+G +
Sbjct: 652 KHYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAID 711
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMK-RNQVKKFPGQSL 589
EP + Y+ +AN Y+ GRWD N+R MK R + K G S+
Sbjct: 712 SEPENDGYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSM 757
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 243/524 (46%), Gaps = 34/524 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
WNS ++ +++ + L + M+ ++ PN+ TFP +A + A + +H
Sbjct: 77 WNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALAC 136
Query: 79 --------HIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V S FV +CD ++ A K+FDE+ VRDV +W A+++G+ Q G E L
Sbjct: 137 KVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGL 196
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS---VHSFGIHIGVDADVSVCNTWI 183
M VG + L + +L L S +H + G+ + + ++ +
Sbjct: 197 ECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVL 256
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
S Y KC + A F + + ++SW SM+ D + F+ M+ N D
Sbjct: 257 SMYCKCGVPREAYQSFSEVIN--KDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPD 314
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ +LS F + G+ H I + D V N+L+SMY K G + A LF
Sbjct: 315 GMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLF- 373
Query: 304 GICDRTRVS---WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
R++ S W MI GY + G + ++LF M+ G + V ++S I+ CGQ G
Sbjct: 374 ---QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGE 430
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+ LG+ G + + + V N+LI+MY KC + + +F E+ V+ W +I+
Sbjct: 431 INLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISA 489
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY-DDKGIS 479
+ EA+ LF ++ D PN T + VL AC+H FLEKG + +Y ++KG
Sbjct: 490 HIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLH--RYINEKGFK 547
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
N L + + D+ + G+L+++ + SM ++ D W ++
Sbjct: 548 LNLPLG--TALVDMYAKCGQLEKSREVFDSM-MEKDVICWNAMI 588
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 7/230 (3%)
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+LD ++SL ++L+ H+ + G + + LIS+Y S+
Sbjct: 7 LKLDHGELISLSKRITTLQSLLP---FHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSS 63
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
LF + + W + + + + L + M + LP+ T + S
Sbjct: 64 TLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFM 123
Query: 360 ALELGKWFDNYACSGG-LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
+ G AC G +N V ++ + +YS+C + DA ++F +P + VV+WT ++
Sbjct: 124 MIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALV 183
Query: 419 AGCALNGEFVEALDLFHQLMEL---DLRPNRVTFLAVLQACTHTGFLEKG 465
G NGE L+ ++ + +PN T AC + G L G
Sbjct: 184 IGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSG 233
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 263/478 (55%), Gaps = 10/478 (2%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTW--ISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
L L +H+ + +G+ + V + ISS D + L + RL +N+
Sbjct: 42 LPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNT 101
Query: 215 MV-AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++ A G D +L Y M+++ + T +L + E L G+ VH + +
Sbjct: 102 LIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKF 161
Query: 274 GFDLDVSVINTLISMYSKC-GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
GFD D+ V NT++ MYS C G I+SAR +FD + V+W+AMI GYA+ G EA+ L
Sbjct: 162 GFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVAL 221
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
F M+ A PD +T++SM+S C GALELGKW + Y + V V NALIDM++K
Sbjct: 222 FREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAK 281
Query: 393 CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
CG I A +LF A+ EK +VSWT++I G A++G EA LF ++ + P+ V F+ +
Sbjct: 282 CGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGL 341
Query: 453 LQACTHTGFLEKG--WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
L AC+H+G +E+G + S++ K P+++HY CM D+ R G +KEAL+FV++M
Sbjct: 342 LSACSHSGLVERGREYFGSMM----KKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNM 397
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
PI+ + I TL+ AC+ H ++GE + L K EP + YV ++N YA W+
Sbjct: 398 PIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKT 457
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
IR +M+ +KK PG ++ I+ + F A D+ H + + Y ++D + ++ Y
Sbjct: 458 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGY 515
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 153/361 (42%), Gaps = 53/361 (14%)
Query: 22 WNSQIRE-AVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N+ IR A + K L L+ M + I PN T+PF+ KACA L L Q +HG +
Sbjct: 99 FNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSV 158
Query: 81 VKSPFVKCD----------------RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
VK F CD ++ A K+FDEM D +W+AM+ G+A++G
Sbjct: 159 VKFGF-DCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTE 217
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ LF M++ + D +T++ + A L L K + ++ + V V N I
Sbjct: 218 AVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALID 277
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+AKC D+ A +F + E +T+VSW S++ G + ++ + M +G D
Sbjct: 278 MFAKCGDISKALKLFRAMNE--KTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDD 335
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ LLS+ + +GR +++ Y I+
Sbjct: 336 VAFIGLLSACSHSGLVERGR---------------EYFGSMMKKYKLVPKIE-------- 372
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ M+ Y + G + EAL M P+ V + +++S C G +LG
Sbjct: 373 -------HYGCMVDMYCRTGLVKEALEFVRNMPIE---PNPVILRTLVSACRGHGEFKLG 422
Query: 365 K 365
+
Sbjct: 423 E 423
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 183/635 (28%), Positives = 311/635 (48%), Gaps = 39/635 (6%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W++ + N + LF + + + PN+ + + +AC+ + ++I G +
Sbjct: 133 SWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFL 192
Query: 81 VKSP---------------FVKCDR-LDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K+ FVK + + AYK+FD+M+ +V +W M+ QMGF
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+R F +M L G ++D T+ + A ++LSL + +HS+ I G+ DV + +
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVEC--SLVD 310
Query: 185 SYAKC------DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG-DKFDDSLNFYRHMMY 237
YAKC DD + VF +++ +V+SW +++ G + +++N + M+
Sbjct: 311 MYAKCSADGSVDDCRK---VFDRMQDH--SVMSWTALITGYMQNCNLATEAINLFSEMIT 365
Query: 238 NGF----RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
G ++ + P G+ V H G + SV N++ISM+ KC
Sbjct: 366 QGHVEPNHFTFSSAFKACGNVSDPRV---GKQVLGHAFKRGLASNSSVSNSVISMFVKCD 422
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
++ AR F+ + ++ VS+ + G + D + A L + T S++S
Sbjct: 423 RMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLS 482
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
G G+L G+ + GL N VCNALI MYSKCGSI A +F + + V+S
Sbjct: 483 GVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVIS 542
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
WT+MI G A +G L+ F+Q+ + ++PN VT++A+L AC+H G + +GW Y
Sbjct: 543 WTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY 602
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+D I P+++HY+CM DLL R G L +A +F+ +MP ++D +W T L AC++H N E
Sbjct: 603 EDHKI--KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE 660
Query: 534 IGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHIN 593
+G+ A + + +P+ A Y++++N YA G+W+ +R MK + K G S +
Sbjct: 661 LGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVG 720
Query: 594 GKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K F D H + Y LD L + Y
Sbjct: 721 DKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGY 755
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 229/487 (47%), Gaps = 34/487 (6%)
Query: 7 PPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKACA 65
PP + S+ IN + I +N + + M ++ I P +++TF + K+C
Sbjct: 19 PPSI-----SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCI 73
Query: 66 KLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMA---VRDVAS 108
+ +++H +++ S + K L A +F+ M RDV S
Sbjct: 74 RARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVS 133
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
W+AM+ F G + ++LF +G+ + + +A ++ + + + + F +
Sbjct: 134 WSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLM 193
Query: 169 HIG-VDADVSVCNTWISSYAKCDD-LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
G ++DV V + I + K ++ + A VF + E VV+W M+ C
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCMQMGFPR 251
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+++ F+ M+ +GF D T+ S+ S+ E L GR +HS I G DV +L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVEC--SLV 309
Query: 287 SMYSKC---GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGEL 342
MY+KC G +D R +FD + D + +SWTA+I+GY Q +L EA+ LF M G +
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHV 369
Query: 343 -PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
P+ T S CG +GK +A GL N V N++I M+ KC + DAR
Sbjct: 370 EPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDART 429
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
F +L EK +VS+ T + G N +F A +L ++ E +L + TF ++L + G
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGS 489
Query: 462 LEKGWAI 468
L KG I
Sbjct: 490 LRKGEQI 496
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 21/301 (6%)
Query: 235 MMYNGFR-LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M +G R +D T SLL S + G+LVH+ I + + D + N+LIS+YSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111
Query: 294 DIDSARVLFDGI---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
D+ A+ +F+ + R VSW+AM++ + G +A++LF G +P+ +
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTA 171
Query: 351 MISGCGQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKC-GSIGDARELFYALPE 408
+I C S + +G+ + +G + +V V +LIDM+ K S +A ++F + E
Sbjct: 172 VIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--- 465
VV+WT MI C G EA+ F ++ ++ T +V AC L G
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQL 291
Query: 466 --WAISIIQYDDKGISYNPELDHYS-CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
WAI DD S +D Y+ C AD G ++ D +Q + S W L
Sbjct: 292 HSWAIRSGLADDVECSL---VDMYAKCSAD--GSVDDCRKVFDRMQDHSVMS----WTAL 342
Query: 523 L 523
+
Sbjct: 343 I 343
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 270/498 (54%), Gaps = 4/498 (0%)
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M + G + F L ++ + + + VH+ I V + I Y KC+
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
L A VF E R R VVSW +M++G + ++L+ + M+ + + T ++L
Sbjct: 61 LGCARHVF--DEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVL 118
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
SS GR +HSH ++ + V ++L+ MY+K G I AR +F+ + +R V
Sbjct: 119 SSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVV 178
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
S TA+ISGYAQ G +EAL LF ++ G + VT S+++ AL+ GK ++
Sbjct: 179 SCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHV 238
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
L V++ N+LIDMYSKCG++ AR++F +P + V+SW M+ G + +G+ +E +
Sbjct: 239 LRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVV 298
Query: 432 DLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCM 490
LF + E + ++P+ VTFLAVL C+H G +KG + + + G ++HY C+
Sbjct: 299 KLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEM-FDEMMNGGDEIEAGIEHYGCV 357
Query: 491 ADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSA 550
DLLGR G+++EA + ++ MP + A IWG+LL AC++H N IGE+V L ++EP +A
Sbjct: 358 IDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENA 417
Query: 551 APYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
YV ++N YA GRW+ V N+R +M V K PG+S ++ TF A DR H E
Sbjct: 418 GNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRRE 477
Query: 611 LTYPVLDCLALHSREEAY 628
+ + L + +E Y
Sbjct: 478 EVFLKVRELLVKFKESGY 495
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 188/395 (47%), Gaps = 25/395 (6%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMA 102
+ + C + Q +H H++K+ ++ KC+ L CA +FDEM
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
R+V SW AM+ G++Q GF L LF M + + T + + L +
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+HS + + V ++ + YAK + A VF + E R VVS ++++G
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPE--RDVVSCTAIISGYAQL 190
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+++L + + G + T SLL++ AL G+ VHSH + V +
Sbjct: 191 GLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQ 250
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
N+LI MYSKCG+++ AR +F+ + RT +SW AM+ GY++ G E ++LF M ++
Sbjct: 251 NSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKV 310
Query: 343 -PDLVTVLSMISGCGQSGALELGKWFDNYACSGG--LKDNVMVCNALIDMYSKCGSIGDA 399
PD VT L+++SGC G + G + +GG ++ + +ID+ + G + +A
Sbjct: 311 KPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEA 370
Query: 400 RELFYALP-EKIVVSWTTMIAGCALN-----GEFV 428
EL +P E W +++ C ++ GEFV
Sbjct: 371 FELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFV 405
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 17/253 (6%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + W + I + A + L LF QM ++D EPN TF + +C S +
Sbjct: 72 RERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGR 131
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH HI K + K R+ A +F+ + RDV S A++ G+AQ+G
Sbjct: 132 QIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLG 191
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
E L LF ++ G+ +++VT L A L K VHS + + V + N
Sbjct: 192 LDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN 251
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNG 239
+ I Y+KC +L A +F + +RTV+SWN+M+ G + K + + ++ M N
Sbjct: 252 SLIDMYSKCGNLNYARKIFNNMP--VRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENK 309
Query: 240 FRLDVTTVVSLLS 252
+ D T +++LS
Sbjct: 310 VKPDSVTFLAVLS 322
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 255/470 (54%), Gaps = 48/470 (10%)
Query: 209 VVSWNSMVA-GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP----EALVQG 263
+VSW S +A C G + + F R M G R + T ++LLS+ C E L G
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSR-MQIAGVRPNHITFLTLLSA--CTDFPLEGLRFG 110
Query: 264 RLVHSHGIHYGFDLDVSVINT-LISMYSKCGDID-------------------------- 296
+H++ G D + ++ T L+ MYSKCG +D
Sbjct: 111 GSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMR 170
Query: 297 -----SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
A VLFD + +R +SWT+MI G+ +KG ++AL F M+ AG PD VT++S+
Sbjct: 171 NGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISV 230
Query: 352 ISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIV 411
++ C GAL LG W + + KDN+ + N+LIDMYS+CG I AR++F +P++ +
Sbjct: 231 LAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSL 290
Query: 412 VSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
VSW +MI G ALNG EAL+ F+ + + RP+ V+F L AC+H+G +++G I
Sbjct: 291 VSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDI 350
Query: 472 QYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
+ IS P ++HY C+ DL R G+L++AL+ + +MP+K + + G+LL AC+ H +
Sbjct: 351 MKRTRKIS--PRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGD 408
Query: 532 IEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFH 591
+ + E + L +++P S + YV ++N YA GRWDG + +R MK + K PG S
Sbjct: 409 VGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIE 468
Query: 592 INGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHEAG 641
++G F A D+ H E++ Y +LD L L R Y +PE E G
Sbjct: 469 MDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRICGY------VPEIEVG 512
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 173/375 (46%), Gaps = 38/375 (10%)
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA--IHAKHLSLL 160
+ + SW + + + G L F M++ G++ + +T + L A + L
Sbjct: 51 IDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFG 110
Query: 161 KSVHSFGIHIGVDAD-VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
S+H++ +G+D + V V + Y+KC L +A L+F E +R VSWN+M+ GC
Sbjct: 111 GSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMF--DEMHVRNSVSWNTMIDGC 168
Query: 220 TYGDK-------------------------------FDDSLNFYRHMMYNGFRLDVTTVV 248
+ F+ +L ++R M G D T++
Sbjct: 169 MRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTII 228
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L++ AL G ++ + F ++ + N+LI MYS+CG I AR +F+ + R
Sbjct: 229 SVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR 288
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWF 367
+ VSW +MI G+A G +EAL F M G PD V+ ++ C SG ++ G ++F
Sbjct: 289 SLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFF 348
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGE 426
D + + + L+D+YS+ G + DA + +P K V +++A C +G+
Sbjct: 349 DIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGD 408
Query: 427 FVEALDLFHQLMELD 441
A L L E+D
Sbjct: 409 VGLAERLMKYLCEVD 423
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 167/420 (39%), Gaps = 98/420 (23%)
Query: 10 LNRIYRSSTIN---QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA- 65
L R + S I+ W S I + + F +M+ + PN++TF + AC
Sbjct: 42 LTRSHTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTD 101
Query: 66 -KLSDLIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDVASW 109
L L + IH ++ K + KC +LD A+ +FDEM VR+ SW
Sbjct: 102 FPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSW 161
Query: 110 N-------------------------------AMLVGFAQMGFLENVLRLFYNMRLVGIQ 138
N +M+ GF + G E L F M+L G++
Sbjct: 162 NTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVE 221
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
D+VT++ + A + L L ++ F + ++ + N+ I Y++C +++A V
Sbjct: 222 PDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQV 281
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F + + R++VSWNSM+ G +++L F+ M GFR D + L++ C
Sbjct: 282 FEQMPK--RSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTA--C-- 335
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV------S 312
S G +D FD I RTR
Sbjct: 336 -------------------------------SHSGLVDEGLQFFD-IMKRTRKISPRIEH 363
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
+ ++ Y++ G L++AL + M P+ V + S+++ C G + L + Y C
Sbjct: 364 YGCLVDLYSRAGRLEDALNVIANMPMK---PNEVVLGSLLAACRTHGDVGLAERLMKYLC 420
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 228/402 (56%), Gaps = 3/402 (0%)
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
SL FY M+ + T S++ S AL GR+VH H + +GF LDV V L++
Sbjct: 95 SLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVA 154
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
+Y KCGD+ +AR +FD I +R+ V+W +MISGY Q G EA+ LF M+ G PD T
Sbjct: 155 LYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSAT 214
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+S++S C GA LG W Y GL NV++ +LI+MY +CG++ ARE+F ++
Sbjct: 215 FVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMK 274
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
E+ VV+WT MI+G NG +A++LFH++ L PN +TF+AVL AC H G + +G
Sbjct: 275 ERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRR 334
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCAC 526
+ ++ + P ++H C+ D+LGR G L EA +F+ + +P I +L AC
Sbjct: 335 LFASIREEYHLV--PGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGAC 392
Query: 527 KIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
K+H N ++G VA L EP + A YV ++N YAL GR D V +R M R +KK G
Sbjct: 393 KMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVG 452
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
S ++ KT F+ D+ H+E+ Y LD L E Y
Sbjct: 453 YSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGY 494
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 189/418 (45%), Gaps = 35/418 (8%)
Query: 44 QMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV-------KSPFVKCDRLDCA-- 94
+ KQ P++ + F+ +A +L L +H HI+ +S K L CA
Sbjct: 2 ETKQPHKLPHSPAYNFLLQAGPRLYLL---HQVHAHIIVSGYGRSRSLLTKLLNLACAAG 58
Query: 95 -----YKIFDEMAVRDVASWNAMLVGFAQ-MGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
+IF + D + +++ ++ F L + M L + T +
Sbjct: 59 SISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVI 118
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
++ L + VH + G DV V ++ Y KC DL A VF I ER +
Sbjct: 119 KSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRER--S 176
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHS 268
+V+WNSM++G +++ + M G D T VS+LS+ A G VH
Sbjct: 177 IVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHE 236
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ + G DL+V + +LI+MY +CG++ AR +FD + +R V+WTAMISGY G +
Sbjct: 237 YIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQ 296
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF-----DNYACSGGLKDNVMVC 383
A+ LF M G P+ +T ++++S C +G + G+ + Y G++ NV
Sbjct: 297 AVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNV--- 353
Query: 384 NALIDMYSKCGSIGDARELFY-ALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLME 439
L+DM + G + +A +PE + T M+ C ++ F DL Q+ E
Sbjct: 354 -CLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNF----DLGAQVAE 406
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 140/277 (50%), Gaps = 19/277 (6%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI----------VKSPFV- 86
+L + +M +++ P+N TF + K+CA LS L + +++HGH+ V++ V
Sbjct: 95 SLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVA 154
Query: 87 ---KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVT 143
KC L A K+FD++ R + +WN+M+ G+ Q GF + + LF M+ G++ D T
Sbjct: 155 LYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSAT 214
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ + A H SL VH + + G+D +V + + I+ Y +C ++ A VF ++
Sbjct: 215 FVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMK 274
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
E R VV+W +M++G ++ + M NG + T V++LS+ + +G
Sbjct: 275 E--RNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEG 332
Query: 264 RLVHSHGIHYGFDLDVSVINT--LISMYSKCGDIDSA 298
R + + I + L V + L+ M + G +D A
Sbjct: 333 RRLFA-SIREEYHLVPGVEHNVCLVDMLGRAGLLDEA 368
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R +I WNS I A + + LF +MK+ +EP++ TF + ACA L
Sbjct: 173 RERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGC 232
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H +IV + +++C + A ++FD M R+V +W AM+ G+ G
Sbjct: 233 WVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNG 292
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ + LF+ MR G+ + +T + + A HA
Sbjct: 293 YGSQAVELFHEMRRNGLFPNSITFVAVLSACAHA 326
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 230/429 (53%), Gaps = 34/429 (7%)
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN M+ G + D+ D SL Y M+ + T LL + A + +H+H
Sbjct: 78 WNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHIT 137
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD------------------------ 307
+G+ D+ +N+LI+ Y+ G+ A +LFD I +
Sbjct: 138 KFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALT 197
Query: 308 --------RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+SWT MISGY Q G EAL+LF M+ + PD V++ S +S C Q G
Sbjct: 198 LFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLG 257
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
ALE GKW +YA + + ++C LIDMY+KCG + +A +F + K V WT +I+
Sbjct: 258 ALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALIS 317
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G A +G EA+ F ++ + ++PN +TF AVL AC++TG +E+G S+ ++ +
Sbjct: 318 GYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEG--KSVFNTIERDYN 375
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P ++HY CM DLLGR G L EA F+Q MP+K +A IWG+LL AC+IH NIE+GE +
Sbjct: 376 LKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIG 435
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L +++ + YV MAN +A+G +WD A R +M+ V K PG S + G T F
Sbjct: 436 EILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEF 495
Query: 600 TAEDRYHAE 608
A DR HAE
Sbjct: 496 LAGDRSHAE 504
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 160/371 (43%), Gaps = 36/371 (9%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
D WN M+ G + + L L++ M + T L +A + +H
Sbjct: 74 DTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIH 133
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ G D+ N+ I+SYA + K A L+F I+E VSWNS++ G +
Sbjct: 134 AHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEP--DAVSWNSVIKGYVKAGE 191
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVS-----------------LLSSFVCPE--------- 258
D +L +R M + TT++S + +S V P+
Sbjct: 192 MDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALS 251
Query: 259 ------ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS 312
AL QG+ +HS+ +D + LI MY+KCG+++ A +F + ++
Sbjct: 252 ACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQV 311
Query: 313 WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW-FDNYA 371
WTA+ISGYA G EA+ F M+ G P+ +T ++++ C +G +E GK F+
Sbjct: 312 WTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIE 371
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEA 430
LK + ++D+ + G + +A +P K V W +++ C ++
Sbjct: 372 RDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELG 431
Query: 431 LDLFHQLMELD 441
+ L+E+D
Sbjct: 432 EKIGEILIEMD 442
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 150/390 (38%), Gaps = 81/390 (20%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN IR ++ ++LLL+ +M N TFPF+ KAC+ LS + IH HI
Sbjct: 78 WNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHIT 137
Query: 82 K---------------------------------------------SPFVKCDRLDCAYK 96
K +VK +D A
Sbjct: 138 KFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALT 197
Query: 97 IFDEMAVRDVA-SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
+F +M ++ A SW M+ G+ Q G + L+LF+ M+ + D V++ A
Sbjct: 198 LFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLG 257
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L K +HS+ D +C I YAKC +++ A VF + + ++V W ++
Sbjct: 258 ALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNM--KTKSVQVWTAL 315
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
++G Y ++++ + M G + + T ++L++ + +G+
Sbjct: 316 ISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGK----------- 364
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
SV NT+ Y+ I+ + M+ + G L+EA R
Sbjct: 365 ----SVFNTIERDYNLKPTIE---------------HYGCMVDLLGRAGLLNEANRFIQK 405
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGK 365
M P+ V S++ C +ELG+
Sbjct: 406 MPLK---PNAVIWGSLLKACQIHKNIELGE 432
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 42/265 (15%)
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
V F+G W MI G + D +L L+ M + T ++ C
Sbjct: 65 VFFNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLS 124
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
A + + G ++ N+LI+ Y+ G+ A LF + E VSW ++I
Sbjct: 125 AFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIK 184
Query: 420 GCALNGEF--------------------------------VEALDLFHQLMELDLRPNRV 447
G GE EAL LFH++ ++ P+ V
Sbjct: 185 GYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNV 244
Query: 448 TFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEAL 504
+ + L AC+ G LE+G W I Y +K + +D C + D+ + G+++EAL
Sbjct: 245 SLASALSACSQLGALEQGKW---IHSYANKTRT---RIDSVLCCVLIDMYAKCGEMEEAL 298
Query: 505 DFVQSMPIKSDAGIWGTLLCACKIH 529
++M KS +W L+ H
Sbjct: 299 GVFKNMKTKS-VQVWTALISGYAYH 322
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 186/629 (29%), Positives = 312/629 (49%), Gaps = 22/629 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + W+S + V + L + R M + P+++T +A+AC K+ L ++
Sbjct: 164 RVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAK 223
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+HG++++ + +C L A +F+ ++ A W +M+ Q G
Sbjct: 224 SVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNG 283
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVC 179
E + F M+ ++ + VT++ + L KSVH F + +D AD+ +
Sbjct: 284 CFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLG 343
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ YA C + E + C I +VVSWN++++ ++++ + M+ G
Sbjct: 344 PALMDFYAACWKISSCEKLLCLIGNS--SVVSWNTLISIYAREGLNEEAMVLFVCMLEKG 401
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D ++ S +S+ ++ G+ +H H GF D V N+L+ MYSKCG +D A
Sbjct: 402 LMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGF-ADEFVQNSLMDMYSKCGFVDLAY 460
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+FD I +++ V+W MI G++Q G EAL+LF M + VT LS I C SG
Sbjct: 461 TIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSG 520
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
L GKW + G++ ++ + AL+DMY+KCG + A+ +F ++PEK VVSW+ MIA
Sbjct: 521 YLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIA 580
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
++G+ A LF +++E ++PN VTF+ +L AC H G +E+G D GI
Sbjct: 581 AYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEG-KFYFNSMRDYGIV 639
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P +H++ + DLL R G + A + ++S DA IWG LL C+IH +++ +
Sbjct: 640 --PNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIH 697
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
L ++ + Y ++N YA GG W +R+ M+ +KK PG S I+ K F
Sbjct: 698 KELREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGYSSIEIDDKIYRF 757
Query: 600 TAEDRYHA-ESELTYPVLDCLALHSREEA 627
A D A + + Y LD +RE+
Sbjct: 758 GAGDTSSAWQMDEIYRFLDNFQSLAREQG 786
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 247/499 (49%), Gaps = 28/499 (5%)
Query: 53 NNLTF--PFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYK 96
N TF P + KA + + L+ + +HG IVK+ + + L A K
Sbjct: 99 QNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARK 158
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FDE+ VRD+ SW++++ + + G L + M G+ D VT++ + +A
Sbjct: 159 VFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGC 218
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L KSVH + I + D S+ N+ I Y +C L+ A+ +F + + + W SM+
Sbjct: 219 LRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSD--PSTACWTSMI 276
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ C F+++++ ++ M + ++ T++S+L L +G+ VH + D
Sbjct: 277 SSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMD 336
Query: 277 -LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D+ + L+ Y+ C I S L I + + VSW +IS YA++G +EA+ LF
Sbjct: 337 GADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVC 396
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M G +PD ++ S IS C + ++ G+ + G D V N+L+DMYSKCG
Sbjct: 397 MLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADE-FVQNSLMDMYSKCGF 455
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ A +F + EK +V+W MI G + NG VEAL LF ++ + N VTFL+ +QA
Sbjct: 456 VDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQA 515
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALDFVQSMPIK 513
C+++G+L KG I K + + D Y + + D+ + G LK A SMP K
Sbjct: 516 CSNSGYLLKGKWI-----HHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEK 570
Query: 514 SDAGIWGTLLCACKIHLNI 532
S W ++ A IH I
Sbjct: 571 SVVS-WSAMIAAYGIHGQI 588
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 15/320 (4%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L +H+ + G+ +D + SYA+ L + LVF T S +S +
Sbjct: 14 LRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVF-------ETHPSPDSFM 66
Query: 217 AGCT-----YGDKFDDSLNFYRHMMYNGFRLDVTTVV---SLLSSFVCPEALVQGRLVHS 268
G + FD ++ Y H + G RL S++ + LV GR VH
Sbjct: 67 FGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHG 126
Query: 269 HGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+ G D + +L+ MY + G + AR +FD I R VSW+++++ Y + G E
Sbjct: 127 RIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPRE 186
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
L + M + G PD VT+LS+ CG+ G L L K Y + + + N+LI
Sbjct: 187 GLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIV 246
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
MY +C + A+ +F ++ + WT+MI+ C NG F EA+D F ++ E ++ N VT
Sbjct: 247 MYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVT 306
Query: 449 FLAVLQACTHTGFLEKGWAI 468
++VL C G+L++G ++
Sbjct: 307 MISVLCCCARLGWLKEGKSV 326
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 271/521 (52%), Gaps = 9/521 (1%)
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
L +S H H++ +VKC RL ++FDEM R+V SW+A++ GF Q G L LF
Sbjct: 246 LPFSLFFHNHVLNF-YVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLF 304
Query: 130 YNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
M G I + T++ A + L +++F + +G ++V + N ++++ +
Sbjct: 305 GRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIR 364
Query: 189 CDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ L A VF E L + VSWN+M+AG F+ F+R M + D T
Sbjct: 365 HEKLLEALEVF---ESCLSKDTVSWNAMMAGYLQLAYFELP-KFWRRMNLESVKPDNFTF 420
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L+ G VH + G+ D+ V N+L MY K + FD +
Sbjct: 421 ASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSS 480
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
SWT M +G Q G+ +AL++ + M+ G + T+ + ++ C ++E GK F
Sbjct: 481 SDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKF 540
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G +V V NAL+DMY+KCG + A +F ++ E+ VVSWTTMI G A NG+
Sbjct: 541 HGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQT 600
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EAL +F ++ + + PN +TF+ VL AC+ GF+++ W D GI+ P DHY
Sbjct: 601 KEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIA--PSEDHY 658
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
CM +LLGR G +KEA D + MP + + +W TLL AC +H +IE G+ A L+
Sbjct: 659 VCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDR 718
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+ + Y+ ++N +A G WD V +R +M+ VKK PG S
Sbjct: 719 NDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKKVPGSS 759
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 24/424 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W++ I V ++ L LF +M I PN T AC+ LI S I+ I
Sbjct: 284 WSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFI 343
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ + ++ ++L A ++F+ +D SWNAM+ G+ Q+ + E +
Sbjct: 344 VRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFE-LP 402
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ + M L ++ D T + L VH + G D+ V N+ Y
Sbjct: 403 KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMY 462
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
K + K+ + E V SW M AGC + +L M G RL+ T
Sbjct: 463 VK--NQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFT 520
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ + L+S ++ +G+ H I G D+DV V N L+ MY+KCG + SA V+F +
Sbjct: 521 LATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMD 580
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGK 365
+R+ VSWT MI G+A G EAL++F M P+ +T + +++ C Q G + E K
Sbjct: 581 ERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWK 640
Query: 366 WFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCA 422
+F + + G+ ++ VC ++++ + G I +A +L +P + + W T++ C
Sbjct: 641 YFSSMSADHGIAPSEDHYVC--MVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACL 698
Query: 423 LNGE 426
++G+
Sbjct: 699 VHGD 702
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 29/230 (12%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
SS + W + E K L + +MK + N T +CA L+ + +
Sbjct: 480 SSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKK 539
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
HG +K + KC + A +F M R V SW M++GFA G
Sbjct: 540 FHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQ 599
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDA 174
+ L++F MR + + +T + + A K+ S + + H I
Sbjct: 600 TKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG----IAPSE 655
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC-TYGD 223
D VC + A C +K AE + + + ++V W +++ C +GD
Sbjct: 656 DHYVCMVNLLGRAGC--IKEAEDLILQMPFQPGSLV-WQTLLGACLVHGD 702
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 178/627 (28%), Positives = 316/627 (50%), Gaps = 23/627 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ I + ++L F M+ E N+ T + C+ + +L + + IHG
Sbjct: 1013 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 1072
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+VK + + + R + A +F M RD+ SWN+M+ + Q G +
Sbjct: 1073 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 1132
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L++ + +G + VT A + + L K VH+ I G + V N ++
Sbjct: 1133 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVT 1192
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y K + A+ V + + R V+WN+++ G ++ ++++ Y+ + G +
Sbjct: 1193 MYGKLGMMMEAKKVLQTMPQPDR--VTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 1250
Query: 245 TTVVSLLSSFVCPEALVQ-GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+VS+L + P+ L++ G +H+H + GF+ D V N+LI+MY+KCGD++S+ +FD
Sbjct: 1251 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 1310
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
G+ +++ ++W AM++ A G +EAL++F M G D + ++ LE
Sbjct: 1311 GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEE 1370
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ G + ++ V NA +DMY KCG + D ++ + +SW +I+ A
Sbjct: 1371 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR 1430
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN-- 481
+G F +A + FH++++L +P+ VTF+++L AC H G +++G A YD +
Sbjct: 1431 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAY----YDSMTREFGVF 1486
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++H C+ DLLGR G+L A F++ MP+ + W +LL AC+IH N+E+ A
Sbjct: 1487 PGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEH 1546
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +L+P + YV +N A G+W+ V N+R M N +KK P S + K +F
Sbjct: 1547 LLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGM 1606
Query: 602 EDRYHAESELTYPVLDCLALHSREEAY 628
++YH ++ L L ++E Y
Sbjct: 1607 GEKYHPQASRISAKLGELMKMTKEAGY 1633
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 184/611 (30%), Positives = 289/611 (47%), Gaps = 28/611 (4%)
Query: 24 SQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKS 83
S+I+ A N + L L + N + + I + C +IH H++ +
Sbjct: 3 SKIQSACNLGRLAEALKL---LSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITN 59
Query: 84 PF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
F VK + A +FD M R V SW AM+ G++Q G E LF
Sbjct: 60 GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119
Query: 130 YNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC 189
+MR G++A+ T +A + L + V ++ V + + ++KC
Sbjct: 120 SDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKC 179
Query: 190 DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
++ A +F + ER VVSWN+M+ G DDS +R M+ G D T+ S
Sbjct: 180 GKMEDASYLFGTMMER--DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGS 237
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
+L + L+ +H G+ V LI+ Y+K G + SA+ L G+ +
Sbjct: 238 VLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKD 297
Query: 310 RVSWTAMISGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
S TA+I+GYA +G +AL LF M D V + SM++ C + LG
Sbjct: 298 LFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIH 357
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
+A +V + NALIDMY+K G I DA+ F + EK V+SWT++I+G A +G
Sbjct: 358 AFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGH 417
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--PELDH 486
A+ L+ ++ +PN VTFL++L AC+HTG +G +++ YN P +H
Sbjct: 418 MAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCEC----FNNMVNKYNIKPRAEH 473
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
YSCM DL R+G L+EA + + + IK +A +WG +L A I+ + +G+ A LF ++
Sbjct: 474 YSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQ 533
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P ++ YV +A+ Y+ G WD IR +M+ KK G S F K+ H
Sbjct: 534 PENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKKSIPLLQVQ--H 591
Query: 607 AESELTYPVLD 617
S + +LD
Sbjct: 592 GVSRRDFNILD 602
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 271/582 (46%), Gaps = 25/582 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S + + + L ++++M+Q + N TF + +C L D + + GHI+
Sbjct: 915 WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII 974
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ S F ++ A +FD M D+ SWNAM+ +A G LR
Sbjct: 975 QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 1034
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F+ MR + + + T+ L +L + +H + +G+D++V +CNT ++ Y+
Sbjct: 1035 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 1094
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ + AELVF + E R ++SWNSM+A K D L ++ G ++ T
Sbjct: 1095 EAGRSEDAELVFQAMTE--RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 1152
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S L++ PE L++ ++VH+ I GF + V N L++MY K G + A+ + +
Sbjct: 1153 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 1212
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC-GQSGALELGKW 366
RV+W A+I G+A+ + +EA++ + + G + +T++S++ C L+ G
Sbjct: 1213 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 1272
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ G + + V N+LI MY+KCG + + +F L K ++W M+A A +G
Sbjct: 1273 IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 1332
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EAL +F ++ + + ++ +F L A + LE+G + + + + +L
Sbjct: 1333 GEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIK---LGFESDLHV 1389
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
+ D+ G+ G++ + L + PI W L+ A H + + + KL
Sbjct: 1390 TNAAMDMYGKCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLG 1448
Query: 547 PH-SAAPYVEMANKYALGGRWD-GVANIRTMMKRNQVKKFPG 586
P +V + + GG D G+A +M + V FPG
Sbjct: 1449 PKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV--FPG 1488
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 215/444 (48%), Gaps = 15/444 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+ K ++ A +FDEM R+ ASW+ ML G+ ++G E + LF M +G++ + V
Sbjct: 789 YSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMV 848
Query: 145 MGLTQAAIHAKHLSLLK-SVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
L A + +++ VH F + G+ DV V + Y + A+ +F +
Sbjct: 849 ASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP 908
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
+ VVSW S++ G + + LN Y+ M G + T ++ SS E V G
Sbjct: 909 DH--NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 966
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
V H I YGF+ VSV N+LISM+S ++ A +FD + + +SW AMIS YA
Sbjct: 967 YQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHH 1026
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G E+LR F M + T+ S++S C L+ G+ GL NV +C
Sbjct: 1027 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 1086
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
N L+ +YS+ G DA +F A+ E+ ++SW +M+A +G+ ++ L + +L+++
Sbjct: 1087 NTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 1146
Query: 444 PNRVTFLAVLQACTHTGFLEKG----WAISIIQYDDKGISYNPELDHYSCMADLLGRKGK 499
N VTF + L AC++ L + I + + D I N + + G+ G
Sbjct: 1147 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGN-------ALVTMYGKLGM 1199
Query: 500 LKEALDFVQSMPIKSDAGIWGTLL 523
+ EA +Q+MP + D W L+
Sbjct: 1200 MMEAKKVLQTMP-QPDRVTWNALI 1222
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 216/453 (47%), Gaps = 21/453 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAK---LSDLIYSQMIHG 78
W++ + V + + LF QM +EPN + AC++ ++D + +HG
Sbjct: 813 WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ--VHG 870
Query: 79 HIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+VK+ + + A K+F+EM +V SW +++VG++ G
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
VL ++ MR G+ + T +T + + L V I G + VSV N+ IS
Sbjct: 931 VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 990
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
++ ++ A VF + E ++SWN+M++ + +SL + M + +
Sbjct: 991 MFSSFSSVEEACYVFDHMNE--CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNS 1048
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TT+ SLLS + L GR +H + G D +V + NTL+++YS+ G + A ++F
Sbjct: 1049 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 1108
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ +R +SW +M++ Y Q G + L++ + G++ + VT S ++ C L
Sbjct: 1109 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 1168
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K G D ++V NAL+ MY K G + +A+++ +P+ V+W +I G A N
Sbjct: 1169 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAEN 1228
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACT 457
E EA+ + + E + N +T ++VL AC+
Sbjct: 1229 EEPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 216/469 (46%), Gaps = 22/469 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ W + + K +LF M+ ++ N T+ +AC L L +
Sbjct: 95 SVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQ 154
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G I K FV KC +++ A +F M RDV SWNAM+ G+A GF +
Sbjct: 155 GCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD 214
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ +F +M G+ D T+ + +A+ L + +H +G + V I
Sbjct: 215 DSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLI 274
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD-DSLNFYRHMMYNGFRL 242
++YAK L+ A+ + G+ + + + S +++ G + + D+L+ ++ M +
Sbjct: 275 NAYAKNGSLRSAKDLRKGMLK--KDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGM 332
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D + S+L+ + G +H+ + Y DV++ N LI MY+K G+I+ A+ F
Sbjct: 333 DDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAF 392
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + ++ +SWT++ISGYA+ G A+ L+ ME+ G P+ VT LS++ C +G
Sbjct: 393 DEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTA 452
Query: 363 LG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAG 420
G + F+N +K + ++D++++ G + +A L + K S W ++
Sbjct: 453 EGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGA 512
Query: 421 CALNGEFVEALDLFHQLMELDLRP-NRVTFLAVLQACTHTGFLEKGWAI 468
++ G + L +++P N V ++ + + G + W I
Sbjct: 513 SSIYGYMSLGKEAASNL--FNMQPENSVNYVVLASIYSAAGLWDDAWKI 559
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 124/229 (54%), Gaps = 9/229 (3%)
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
L F + + G+ +H+ I +L + NTLI+MYSK G+I+ AR +FD + R
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDN 369
SW+ M+SGY + G +EA+ LF M G P+ V S+I+ C +SG + + G
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+ G+ +V V AL+ Y G + +A++LF +P+ VVSWT+++ G + +G E
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK---GWAI--SIIQY 473
L+++ ++ + + N+ TF V +C G LE G+ + IIQY
Sbjct: 931 VLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQY 976
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 3/289 (1%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
K++H+F I V+ + NT I+ Y+K +++ A VF E R R SW++M++G
Sbjct: 764 KALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF--DEMRHRNEASWSTMLSGYV 821
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV-QGRLVHSHGIHYGFDLDV 279
+++++ + M G + V SL+++ + +G VH + G DV
Sbjct: 822 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 881
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V L+ Y G + +A+ LF+ + D VSWT+++ GY+ G+ E L ++ M
Sbjct: 882 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 941
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G + T ++ S CG LG + G +D+V V N+LI M+S S+ +A
Sbjct: 942 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 1001
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
+F + E ++SW MI+ A +G E+L FH + L N T
Sbjct: 1002 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050
>gi|357131661|ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Brachypodium distachyon]
Length = 924
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 175/597 (29%), Positives = 303/597 (50%), Gaps = 27/597 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
RI++ + ++ WN I+ + +A + L +FR+M ++ +P+ T + +C L
Sbjct: 334 RIFKKNHVS-WNVMIKGLMENEKAGEALAVFREM-LSECQPDFATLVAVILSCGDQGLLC 391
Query: 72 YSQMIHGHIVKS---------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
+ IHG+I + ++KCD A +F M +RD+ SWN ML G+
Sbjct: 392 EGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLFRTMPIRDLISWNTMLSGY 451
Query: 117 AQMGFL-ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
++ L E +F + G+ T++ + + + L K+VHSF + G +
Sbjct: 452 SRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASG 511
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
VSV N + Y C D + G + ++SWN+ V GC +L ++
Sbjct: 512 VSVVNALMHMYICCGD-SLVAFTLLGSIMPVSDIISWNTAVVGCVQNGLHRGALEAFQ-F 569
Query: 236 MYNGFRL--DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M++ L D T+VS+LS+ + G+ +HS + ++ V N L++MY +
Sbjct: 570 MHSSLPLNPDSITLVSVLSACGTLKLQSLGKSIHSMALKRLLVFNLRVKNALLTMYFRFA 629
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
D +SA ++F + DR SW M+SG+AQ D AL+ + ME +P+ + +S+I
Sbjct: 630 DTESAELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFYQKMEKF--VPNEMCTVSIIC 687
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C Q + GK + L++NV + +L+DMYSKCG + A +F + EK +
Sbjct: 688 ACTQLRDVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSKCGRLDIAVRVFESSTEKSIAC 747
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
W +MI+ +G + +++LF ++ ++ R TF+A+L AC+H G ++G +
Sbjct: 748 WNSMISAFGFHGHGLRSIELFCSMIHSGMKATRSTFIALLSACSHAGLTDEGLKYYNLMS 807
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA-GIWGTLLCACKIHLNI 532
+ GI+ PE H+ C+ D+LGR G+L+EA FV+S+P +A G+WG LL AC +
Sbjct: 808 EKFGITPTPE--HHVCIVDMLGRAGRLQEAHKFVESLPKSKEAHGVWGALLSACSNKSEL 865
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
+GE +A L LEP ++ YV ++N YA W G +R +++ ++ K G S+
Sbjct: 866 RMGEAIARQLLCLEPENSGYYVTISNLYAYQDMWGGAVQVRDILQDKRLMKPHGHSI 922
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 212/458 (46%), Gaps = 27/458 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ I + LFR+M E ++ T + ++ +L +H
Sbjct: 137 WNAVIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGASRAGELDLGMALHAAA 196
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VK + KC + +F M D ASWN++ G G E
Sbjct: 197 VKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEVSA 256
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHL-SLLKSVHSFGIHIGVD--ADVSVCNTWI 183
F M + +QAD VT+ + A+ A+ L S +SVH + +G + A SV N+ I
Sbjct: 257 CYFREMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVANSLI 316
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y + + AE VF I + + VSWN M+ G +K ++L +R M+ + + D
Sbjct: 317 TFYFEFGFPEDAEKVFMRIFK--KNHVSWNVMIKGLMENEKAGEALAVFREML-SECQPD 373
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVINTLISMYSKCGDIDSARVLF 302
T+V+++ S L +G+ +H + F ++ S+ N+L+ +Y KC D +A +LF
Sbjct: 374 FATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLF 433
Query: 303 DGICDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
+ R +SW M+SGY++ L +EA +F + + G + T+L++I C L
Sbjct: 434 RTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDL 493
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA-LPEKIVVSWTTMIAG 420
GK ++ G V V NAL+ MY CG A L + +P ++SW T + G
Sbjct: 494 RFGKAVHSFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGSIMPVSDIISWNTAVVG 553
Query: 421 CALNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQAC 456
C NG AL+ F Q M L L P+ +T ++VL AC
Sbjct: 554 CVQNGLHRGALEAF-QFMHSSLPLNPDSITLVSVLSAC 590
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 201/443 (45%), Gaps = 20/443 (4%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA-DFVTVMGLTQAAI 152
A +F E DV WNA++ + L + + LF M V +A D TV+ + A
Sbjct: 122 ALVLFHEAEDPDVILWNAVIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGAS 181
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
A L L ++H+ + +D D+++ N + YAKC +E VF + SW
Sbjct: 182 RAGELDLGMALHAAAVKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMP--CWDTASW 239
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ-GRLVHSHGI 271
NS+ G T+ + S ++R M+ + D T+ S++S+ E L G VH +
Sbjct: 240 NSVTGGSTFNGLSEVSACYFREMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIV 299
Query: 272 HYGFD--LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
G++ SV N+LI+ Y + G + A +F I + VSW MI G + EA
Sbjct: 300 KLGYEDTAPCSVANSLITFYFEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEA 359
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL-KDNVMVCNALID 388
L +F M + + PD T++++I CG G L GK Y L + N+L+
Sbjct: 360 LAVFREMLSECQ-PDFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLG 418
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRPNRV 447
+Y KC A LF +P + ++SW TM++G + + EA +F +L+ L
Sbjct: 419 LYMKCDDAYTANLLFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMT 478
Query: 448 TFLAVLQACTHTGFLEKGWAIS--IIQYD-DKGISYNPELDH-YSCMADLLGRKGKLKEA 503
T LAV+ +C+ L G A+ +++Y G+S L H Y C D L A
Sbjct: 479 TILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVSVVNALMHMYICCGDSL-------VA 531
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
+ S+ SD W T + C
Sbjct: 532 FTLLGSIMPVSDIISWNTAVVGC 554
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 173/377 (45%), Gaps = 23/377 (6%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCD-----DLKMAELVFCGIEERLRTVVSWNS 214
++S+H + G D V + +++YA+C D + A ++F E+ V+ WN+
Sbjct: 82 VESLHCAALKSGAVLDPPVRTSLLAAYARCPSGGDHDARAALVLFHEAEDP--DVILWNA 139
Query: 215 MVAGCTYGDKFDDSLNFYRHMM-YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++ T + D++ +R M G D TTVV +LS L G +H+ +
Sbjct: 140 VIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGASRAGELDLGMALHAAAVKR 199
Query: 274 GFDLDVSVINTLISMYSKCGDI-DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
D D+++ N L+ MY+KCG DS V + C T SW ++ G G + +
Sbjct: 200 RLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDT-ASWNSVTGGSTFNGLSEVSACY 258
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQS-GALELGKWFDNYACSGGLKDNV--MVCNALIDM 389
F M D VT+ S+IS ++ G G+ G +D V N+LI
Sbjct: 259 FREMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVANSLITF 318
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y + G DA ++F + +K VSW MI G N + EAL +F +++ + +P+ T
Sbjct: 319 YFEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVFREMLS-ECQPDFATL 377
Query: 450 LAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD---F 506
+AV+ +C G L +G AI Y + ++ E S LLG K +A
Sbjct: 378 VAVILSCGDQGLLCEGKAIH--GYITRKCLFHVE---SSLGNSLLGLYMKCDDAYTANLL 432
Query: 507 VQSMPIKSDAGIWGTLL 523
++MPI+ D W T+L
Sbjct: 433 FRTMPIR-DLISWNTML 448
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 188/611 (30%), Positives = 307/611 (50%), Gaps = 34/611 (5%)
Query: 31 NKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY--SQMIHGHIVKSPF--- 85
N EA + L LF + + + PN T +AC S+L + + G + K F
Sbjct: 130 NGAEA-EALRLFGETLEEGLLPNAFTLCAATQACFA-SELFHLAGGAVLGLVFKLGFWGT 187
Query: 86 ---VKCDRLD---------CAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMR 133
V C +D ++FD + R V W ++ +AQ G+ + + LF +M
Sbjct: 188 DVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDML 247
Query: 134 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD-- 191
G Q D T+ + A L + +HS + +G+++D V + YAK +
Sbjct: 248 ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQ 307
Query: 192 -LKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVS 249
L A VF + + V++W ++++G G + + + + M+ G R + T S
Sbjct: 308 SLHNAREVFNRMPKH--NVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSS 365
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGF-DLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
+L + GR +H+H + DL+V V N L+SMY++ G I+ AR FD + ++
Sbjct: 366 MLKACANLGDQDSGRQIHTHCVKSNLADLNV-VGNALVSMYAESGSIEEARHAFDQLYEK 424
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
VS++ + G + + + +E T S+IS G L G+
Sbjct: 425 NMVSFSGNLDGDGRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLH 479
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
+ G + + N+L+ MYS+CG + DA ++F + + V+SWT+MI+G A +G
Sbjct: 480 ALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAA 539
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYS 488
AL+LFH ++ ++PN VT++AVL AC+H G +++G + G+ P ++HY+
Sbjct: 540 RALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLI--PRMEHYA 597
Query: 489 CMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPH 548
CM DLLGR G +++ALDF+ MP + DA +W TLL ACK H N++IGE A + +LEP
Sbjct: 598 CMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQ 657
Query: 549 SAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAE 608
APYV ++N YA G WD VA IR++M+ + K G S H++ F A D H +
Sbjct: 658 DPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQ 717
Query: 609 SELTYPVLDCL 619
+E Y L+ L
Sbjct: 718 AEEIYTKLETL 728
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 162/303 (53%), Gaps = 6/303 (1%)
Query: 172 VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNF 231
++ D V N+ ++ Y+KC + A VF G+ LR +VSW +M + + ++L
Sbjct: 80 LETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRL 139
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEAL-VQGRLVHSHGIHYGF-DLDVSVINTLISMY 289
+ + G + T+ + + E + G V GF DVSV LI M+
Sbjct: 140 FGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMF 199
Query: 290 SKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVL 349
+K GD+ + R +FDG+ +RT V WT +I+ YAQ G DEA+ LF M G PD T+
Sbjct: 200 AKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLS 259
Query: 350 SMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC---GSIGDARELFYAL 406
SM+S C + G+ LG+ + A GL+ + V L+DMY+K S+ +ARE+F +
Sbjct: 260 SMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRM 319
Query: 407 PEKIVVSWTTMIAGCALNG-EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
P+ V++WT +++G G + + + LF +++ +RPN +T+ ++L+AC + G + G
Sbjct: 320 PKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSG 379
Query: 466 WAI 468
I
Sbjct: 380 RQI 382
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 188/389 (48%), Gaps = 15/389 (3%)
Query: 85 FVKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ KC + A +FD M V RD+ SW AM ++ G LRLF G+ +
Sbjct: 94 YSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAF 153
Query: 143 TVMGLTQAAIHAKHLSLL-KSVHSFGIHIGV-DADVSVCNTWISSYAKCDDLKMAELVFC 200
T+ TQA ++ L +V +G DVSV I +AK DL VF
Sbjct: 154 TLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFD 213
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
G+ E RTVV W ++ D+++ + M+ NGF+ D T+ S+LS+ +
Sbjct: 214 GLFE--RTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSF 271
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD---IDSARVLFDGICDRTRVSWTAMI 317
G+ +HS + G + D V L+ MY+K + + +AR +F+ + ++WTA++
Sbjct: 272 RLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALL 331
Query: 318 SGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
SGY Q+G D + + LF M G P+ +T SM+ C G + G+ + L
Sbjct: 332 SGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNL 391
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
D +V NAL+ MY++ GSI +AR F L EK +VS++ + G + + + +Q
Sbjct: 392 ADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQ 446
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ ++L + TF +++ A G L KG
Sbjct: 447 IERMELGISTFTFGSLISAAASVGMLTKG 475
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 10 LNRIYRSSTINQWNSQIREAVNK-NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
NR+ + + + W + + V + ++ ++ ++LF +M I PN++T+ + KACA L
Sbjct: 316 FNRMPKHNVM-AWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLG 374
Query: 69 DLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
D + IH H VKS + + ++ A FD++ +++ S++ L
Sbjct: 375 DQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLD 434
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G + ++ Y + + + T L AA L+ + +H+ + G +
Sbjct: 435 GDGRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGS 489
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D ++ N+ +S Y++C L A VF + + V+SW SM++G +L +
Sbjct: 490 DRAIGNSLVSMYSRCGYLVDACQVFDEMND--HNVISWTSMISGLAKHGYAARALELFHD 547
Query: 235 MMYNGFRLDVTTVVSLLSS 253
M+ G + + T +++LS+
Sbjct: 548 MIAAGVKPNDVTYIAVLSA 566
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 307/617 (49%), Gaps = 21/617 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + + LF MK+ + +F + K A + +HG +V
Sbjct: 15 WNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKRFDLGEQVHGLVV 74
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC+R++ A+ F E+ + SWNA++ GF Q+ +
Sbjct: 75 KGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDTKTAFW 134
Query: 128 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M + + D T L +LLK VH+ + +G++ ++++CN ISSY
Sbjct: 135 LLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEHEITICNAMISSY 194
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A C + A+ VF G+ + ++SWNSM+AG + ++ + + + M N D+ T
Sbjct: 195 ANCGLVSDAKRVFDGLGGS-KDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYT 253
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK--CGDIDSARVLFDG 304
++S+ E G+ +H I G + SV N LISMY + G + A LF+
Sbjct: 254 YTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFES 313
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + VSW ++++G++Q G ++A++ F + ++ D +++ C L+LG
Sbjct: 314 LKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLG 373
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-IVVSWTTMIAGCAL 423
+ A + N V ++LI MYSKCG I +AR+ F + K ++W MI G A
Sbjct: 374 QQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQ 433
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G +LDLF Q+ +++ + VTF A+L AC+HTG +++G + ++ + P
Sbjct: 434 HGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG--LELLNSMEPVYKIQPR 491
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HY+ DLLGR G + + + ++SMP+ D + T L C+ IE+ VA L
Sbjct: 492 MEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL 551
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
++EP YV +++ Y+ +W+ AN++ MMK VKK PG S I + F AED
Sbjct: 552 EIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIEIRNQVNAFNAED 611
Query: 604 RYHAESELTYPVLDCLA 620
R H+ S+ Y +++ L
Sbjct: 612 RSHSLSKEIYLMIEDLT 628
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 178/376 (47%), Gaps = 10/376 (2%)
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAK 155
++FDEM RD SWN M+ G+ G LEN LF +M+ G D + L + AK
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
L + VH + G + +V V ++ + YAKC+ ++ A F I E VSWN++
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILE--PNSVSWNAL 119
Query: 216 VAGCTYGDKFDDSLNFY---RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
+AG + D F+ M +D T LL+ P + VH+ +
Sbjct: 120 IAG--FVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLK 177
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGYAQKGDLDEALR 331
G + ++++ N +IS Y+ CG + A+ +FDG+ + +SW +MI+G ++ + A
Sbjct: 178 LGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFE 237
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
LF M D+ T ++S C GK GL+ V NALI MY
Sbjct: 238 LFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYI 297
Query: 392 K--CGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
+ G + DA LF +L K +VSW +++ G + NG +A+ F L ++ + F
Sbjct: 298 QFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAF 357
Query: 450 LAVLQACTHTGFLEKG 465
AVL++C+ L+ G
Sbjct: 358 SAVLRSCSDLATLQLG 373
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 22/328 (6%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R VSWN+M++G T K ++S + M G +D + LL + G V
Sbjct: 10 RDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKRFDLGEQV 69
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H + G++ +V V ++L+ MY+KC ++ A F I + VSW A+I+G+ Q D
Sbjct: 70 HGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDT 129
Query: 327 DEALRLFFAMEAA-------GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
A L ME G L+T+L C L K GL+
Sbjct: 130 KTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCN------LLKQVHAKVLKLGLEHE 183
Query: 380 VMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+ +CNA+I Y+ CG + DA+ +F L K ++SW +MIAG + + + A +LF ++
Sbjct: 184 ITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMH 243
Query: 439 ELDLRPNRVTFLAVLQACT---HTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
+ + T+ ++ AC+ H F + + I KG+ + + +
Sbjct: 244 RNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVI----KKGLEQVTSVSNALISMYIQF 299
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G +K+AL +S+ K D W +++
Sbjct: 300 PTGVMKDALSLFESLKPK-DLVSWNSIM 326
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 17/254 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S + WNS I + LF +M +N IE + T+ I AC+ + +
Sbjct: 213 SKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKS 272
Query: 76 IHGHIVKSPFVKCDRLDC----------------AYKIFDEMAVRDVASWNAMLVGFAQM 119
+HG ++K + + A +F+ + +D+ SWN+++ GF+Q
Sbjct: 273 LHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQN 332
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G E+ ++ F +R I+ D + ++ L L + H+ +++ V
Sbjct: 333 GLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVT 392
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
++ I Y+KC ++ A F I + T ++WN+M+ G SL+ + M
Sbjct: 393 SSLILMYSKCGVIENARKCFEQISSKHNT-IAWNAMILGYAQHGSGQVSLDLFSQMCNQN 451
Query: 240 FRLDVTTVVSLLSS 253
+LD T ++L++
Sbjct: 452 VKLDHVTFTAILTA 465
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 179/601 (29%), Positives = 299/601 (49%), Gaps = 24/601 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WNS + + M ++ I N + + AC D + +HG
Sbjct: 178 IVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHG 237
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
++KS + K L+ + ++F+ M ++ SWN+ L FA GF E+
Sbjct: 238 LVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHED 297
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
VL +F M + VT+ L A + + L K VH + I +++D+ + N+ +
Sbjct: 298 VLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMD 357
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAK L+ A +F IE R VVSWN+M+A ++ + M NG +
Sbjct: 358 MYAKFGCLEKASAIFENIEGR--NVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNS 415
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+V+LL + ++ G+ +H+ IH D+ V N LI +Y+KCG + A+ +FD
Sbjct: 416 FTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR 475
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
++ VS+ +I GY+Q E+L LF M +AG D V+ + +S C A + G
Sbjct: 476 -SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQG 534
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K L + + N+L+D+Y+K G + A ++F + K V SW TMI G ++
Sbjct: 535 KEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMH 594
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN--P 482
G+ A +LF + + + + V+++AVL AC+H G +++G +Y + I+ N P
Sbjct: 595 GQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGK-----KYFSQMIAQNIKP 649
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCL 542
+ HY+CM DLLGR G+L E+++ + +MP +++ +WG LL +C+IH +IE+ A L
Sbjct: 650 QQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHL 709
Query: 543 FKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAE 602
F+L+P + Y + N Y+ G W+ I+T+MK +V+K P S K F
Sbjct: 710 FELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVG 769
Query: 603 D 603
D
Sbjct: 770 D 770
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 260/552 (47%), Gaps = 31/552 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFI---------------AK---- 62
WNS R + + L ++ M ++ + P++ TFPF AK
Sbjct: 74 WNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAEL 133
Query: 63 -ACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
A A L+ + + G+ + + + R A ++FDEM RD+ SWN+++ G
Sbjct: 134 HAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGM 193
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
LE+ R M GI + +++ + A + SVH + G+D+ V++ N
Sbjct: 194 LEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNA 253
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y K DL+ + VF G++E+ VSWNS + + +D L +R M +
Sbjct: 254 LVDMYGKFGDLESSMRVFNGMQEK--NEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVT 311
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T+ SLL + V G+ VH + I + D+ + N+L+ MY+K G ++ A +
Sbjct: 312 PGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAI 371
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F+ I R VSW AMI+ AQ G EA L M+ GE P+ T+++++ C + ++
Sbjct: 372 FENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASV 431
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
++GK ++ L ++ V NALID+Y+KCG + A+++F EK VS+ T+I G
Sbjct: 432 KMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIF-DRSEKDDVSYNTLIVGY 490
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+ + E+L LF Q+ + + V+F+ L AC + ++G I + + ++ +
Sbjct: 491 SQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLV-RRLLNTH 549
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P L + + DL + G L A + + D W T++ +H I+ VA+
Sbjct: 550 PFLAN--SLLDLYTKGGMLATASKIFNRI-TRKDVASWNTMILGYGMHGQID----VAFE 602
Query: 542 LFKLEPHSAAPY 553
LF L Y
Sbjct: 603 LFDLMKDDGVDY 614
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 174/374 (46%), Gaps = 8/374 (2%)
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD-----FVTVMGLTQAAIHAK 155
+ +R WN++ A G LR++ M G++ D F A+
Sbjct: 66 LRLRSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAE 125
Query: 156 HLSLLKSVHSFGIHIGVD-ADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
H + +H+ + G+ ADV NT ++ YA A VF E R +VSWNS
Sbjct: 126 HPAKGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVF--DEMPARDIVSWNS 183
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+V+ +D+ MM +G ++V ++VS++ + G VH + G
Sbjct: 184 LVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSG 243
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
D V++ N L+ MY K GD++S+ +F+G+ ++ VSW + + +A G ++ L +F
Sbjct: 244 LDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFR 303
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M P VT+ S++ G LGK Y+ ++ ++ + N+L+DMY+K G
Sbjct: 304 VMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFG 363
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
+ A +F + + VVSW MIA A NG EA L ++ + PN T + +L
Sbjct: 364 CLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLP 423
Query: 455 ACTHTGFLEKGWAI 468
AC+ ++ G I
Sbjct: 424 ACSRVASVKMGKQI 437
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 7/314 (2%)
Query: 159 LLKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
LL+ H+ + G + A + + + SYA D+ A L+ RLR+ WNS+
Sbjct: 20 LLRRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSR 79
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL-----VQGRLVHSHGIH 272
++L Y M+ +G R D T L + +G +H+ +
Sbjct: 80 ALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALR 139
Query: 273 YGFDL-DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
G L DV NTL++ Y+ G AR +FD + R VSW +++S G L++A R
Sbjct: 140 RGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKR 199
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
M +G ++ +++S++ CG G GL V + NAL+DMY
Sbjct: 200 AVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYG 259
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
K G + + +F + EK VSW + + A G + L++F + E ++ P VT +
Sbjct: 260 KFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSS 319
Query: 452 VLQACTHTGFLEKG 465
+L A G+ G
Sbjct: 320 LLPALVDLGYFHLG 333
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 192/627 (30%), Positives = 294/627 (46%), Gaps = 42/627 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
+I W I V++ + + LF ++ Q I + + F + AC+ L ++IH
Sbjct: 92 SIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIH 151
Query: 78 ----------GHIVKSPFV----KCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQMGFL 122
IV S V +C L A +F + DV WNAM+ +Q G
Sbjct: 152 RCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSP 211
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL--SLLKSVHSFGIHIGVDADVSVCN 180
L +FY M +GI D VT + + +A + L S +K H+ G+ +DV V
Sbjct: 212 REALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVAT 271
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNG 239
+++YA+C ++ A F + ER VSW SM+A G ++ + M+ G
Sbjct: 272 ALVNAYARCGEIDCAREFFAAMPER--NAVSWTSMIAAFAQIGHLL--AVETFHAMLLEG 327
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC-GDIDSA 298
V T +L ++ E L RLV + G DV+++ L+ Y++C G D+
Sbjct: 328 V---VPTRSTLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAI 384
Query: 299 RVLFDGICDRTRVSW-----TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
RV R W TAMI+ YAQ D +L+ A G PD + ++ +
Sbjct: 385 RVF----SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALD 440
Query: 354 GCGQSGALELGKWFDNYACSGG---LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
C AL G+ +AC L +V + NA++ MY +CGS+ DAR+ F +P +
Sbjct: 441 ACASLAALSEGRQI--HACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARD 498
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
+SW M++ A +G + DLF +++ RV FL +L AC H G +E G
Sbjct: 499 EISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFS 558
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
D G+ P +HY CM DLLGRKG+L +A VQ+MP+ DA W L+ AC+I+
Sbjct: 559 AMTGDHGVV--PATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYG 616
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
+ E G + A + +L + A YV + N Y+ GRW+ A +R +M ++K PG S
Sbjct: 617 DTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSI 676
Query: 591 HINGKTCTFTAEDRYHAESELTYPVLD 617
I K F DR H +SE Y L+
Sbjct: 677 EIRSKVHEFVVRDRSHPQSEAIYAELE 703
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 203/459 (44%), Gaps = 24/459 (5%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
+++C L+ A +F ++A + + W ++ + G + LF+ + GI D +
Sbjct: 72 YLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVF 131
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ + A + L+ + +H + G+ V + +S Y +C L+ A +F +E
Sbjct: 132 VSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLER 191
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
L VV WN+M+ + ++L + M+ G D+ T VS+ + +L R
Sbjct: 192 HL-DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSL---R 247
Query: 265 LVHSHGIH-----YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
G H G DV V L++ Y++CG+ID AR F + +R VSWT+MI+
Sbjct: 248 ASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAA 307
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
+AQ G L A+ F AM G +P T+ + + GC L + + A G+ +
Sbjct: 308 FAQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCED---LHTARLVEAIAQEIGVATD 363
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW-----TTMIAGCALNGEFVEALDLF 434
V + L+ Y++C DA +F A E W T MIA A + L+
Sbjct: 364 VAIVTDLVMAYARCDGQEDAIRVFSAREEG---EWDAALVTAMIAVYAQCRDRRSTFKLW 420
Query: 435 HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLL 494
+E + P+R+ ++ L AC L +G I D+ + + L + + +
Sbjct: 421 GAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN--AIVSMY 478
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
G+ G L++A D MP + + W +L A H +E
Sbjct: 479 GQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 158/321 (49%), Gaps = 10/321 (3%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D + ++ + Y +C L+ A VF I + ++V W +++ ++ +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHK--SIVLWTVLISAYVSRGHSAAAIALFHR 118
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
++ G LD VS+LS+ E L GRL+H + G L V + L+SMY +CG
Sbjct: 119 ILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178
Query: 295 IDSARVLFDGICDR--TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
+ A LF G +R V W AMI+ +Q G EAL +F+ M G PDLVT +S+
Sbjct: 179 LRDANALF-GHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVF 237
Query: 353 SGCGQSGALELGKWFDNYAC--SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
C S +L + + C GL +V+V AL++ Y++CG I ARE F A+PE+
Sbjct: 238 KACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERN 297
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT--HTGFLEKGWAI 468
VSWT+MIA A G + A++ FH ++ + P R T A L+ C HT L + A
Sbjct: 298 AVSWTSMIAAFAQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAIAQ 356
Query: 469 SIIQYDDKGISYNPELDHYSC 489
I D I + + + C
Sbjct: 357 EIGVATDVAIVTDLVMAYARC 377
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 132/248 (53%), Gaps = 11/248 (4%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
++L+ MY +CG ++SA +F I ++ V WT +IS Y +G A+ LF + G
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
D + +S++S C L G+ A GL +V +AL+ MY +CGS+ DA L
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANAL 185
Query: 403 FYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGF 461
F L + VV W MI + NG EAL++F+++++L + P+ VTF++V +AC+ +
Sbjct: 186 FGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPS 245
Query: 462 LE----KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG 517
L KG+ + D+ G+ + + + + + R G++ A +F +MP + +A
Sbjct: 246 LRASQVKGFHTCL---DETGLGSDVVV--ATALVNAYARCGEIDCAREFFAAMP-ERNAV 299
Query: 518 IWGTLLCA 525
W +++ A
Sbjct: 300 SWTSMIAA 307
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 275/517 (53%), Gaps = 20/517 (3%)
Query: 109 WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI 168
+N+++ G+ F + + ++ M G D T L +A + + VH +
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 169 HIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDS 228
+G+ AD V N+ I Y C D A VF E +R VVSWNS+++G FD++
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVF--DEMLVRDVVSWNSLISGFMKAGHFDEA 190
Query: 229 LNFYRHMMYNGFRLDV----TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
++ + FR+DV TT+VS+L++ L G+ +H I F +++ + N
Sbjct: 191 ISVF-------FRMDVEPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNLVLGNA 242
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
++ MY K G A+ +FD + R VSWT MI+G Q ++L LF M G PD
Sbjct: 243 MLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPD 302
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ + S++S C G L+ G W Y G+K ++ + A++DMY+KCG I A ++FY
Sbjct: 303 AIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFY 362
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
++ ++ +W ++ G A++G EAL+LF ++ ++PN +TFLA+L AC H G +++
Sbjct: 363 SMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDE 422
Query: 465 GWAISIIQYDDKGISYN--PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTL 522
G +D+ YN P+L+HY CM DL R G L+EA++ ++MP+K D IWG L
Sbjct: 423 GRK----YFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLL 478
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L AC NIE+ + + +L+ + +V ++N A+ RW V +R +MK V+
Sbjct: 479 LNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVR 538
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
K PG S+ ++GK F D H ++E Y VL+ +
Sbjct: 539 KAPGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLI 575
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 200/436 (45%), Gaps = 22/436 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG--- 78
+NS I V + ++R+M ++ P+ TFP + KAC+ S + +HG
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 79 -------HIVKSPFVKC----DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
H V++ ++C CA K+FDEM VRDV SWN+++ GF + G + +
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F+ M ++ T++ + A L K +H I ++ + N + Y
Sbjct: 193 VFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGV-IERRFKVNLVLGNAMLDMYV 248
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
K A+ +F E R +VSW M+ G D SL + M G D +
Sbjct: 249 KNGCFYEAKNIF--DELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIIL 306
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+LS+ L G VH + G D+ + ++ MY+KCG I+ A +F +
Sbjct: 307 TSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQ 366
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KW 366
R +W A++ G A G + EAL LF M +G P+ +T L++++ C G ++ G K+
Sbjct: 367 RNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKY 426
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNG 425
FDN + L + +ID++ + G + +A EL +P K V+ W ++ C G
Sbjct: 427 FDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVG 486
Query: 426 EFVEALDLFHQLMELD 441
+ + ++ELD
Sbjct: 487 NIELSHRIQDYILELD 502
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I W I V + ++L LF M+ I P+ + + ACA L L + +H
Sbjct: 268 IVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 327
Query: 79 HI--------------VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+I + + KC ++ A KIF M+ R+ +WNA+L G A G +
Sbjct: 328 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHE 387
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
L LF M + G++ + +T + + A H
Sbjct: 388 ALNLFEVMIISGVKPNEITFLAILTACCH 416
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 183/613 (29%), Positives = 304/613 (49%), Gaps = 23/613 (3%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
R + +WN+ I ++ + + +F M ++ +TF + AC+KL DL ++
Sbjct: 162 RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAK 221
Query: 75 MI--------HGHIVKSPFV--------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
++ H H+ S F C L+ A++ F + + + AM+ + Q
Sbjct: 222 LVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQ 280
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
+ L LF M L G++ D + M + A + L + +H F I D V+
Sbjct: 281 RERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNA 340
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N I+ Y KC L+ A VF ++ R V+SWN+++A + ++L+ M +
Sbjct: 341 GNALINMYGKCGSLEEAVEVFRSMQHR--DVISWNTIIAAHGQHSQHPEALHLLHLMQLD 398
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + D + V+ L EAL +GR++HS + G DV + N ++ MY C D A
Sbjct: 399 GVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDA 458
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLD-EALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
+F + R +VSW AMI+ YA + L EAL LF M+ G +PD+++ ++ +S C
Sbjct: 459 SRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAA 518
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+L GK + GL+ N+ V NA+++MY+K G++ AR++F +P V+SW M
Sbjct: 519 QASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGM 578
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI-IQYDDK 476
I+ A +G + L F ++ PN VTF++V+ AC+H G ++ G + + + +D
Sbjct: 579 ISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFP 638
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
IS P +HY CM DL+ R GKL A F+ + P+K D I T+L A K+H ++E
Sbjct: 639 TIS--PRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERAR 696
Query: 537 YVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKT 596
A L +L P +A YV ++N Y G+ D A IR +M ++K P S + +
Sbjct: 697 KSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRV 756
Query: 597 CTFTAEDRYHAES 609
F D +A +
Sbjct: 757 HEFFTGDTTNART 769
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 247/526 (46%), Gaps = 25/526 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS-QMIHG-- 78
W IR ++ + L LFR M+ + P N F + AC+ +L+ + IHG
Sbjct: 67 WARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVL 126
Query: 79 --------HIVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
H V + + KC ++ A K+FD + + V WNAM+ +AQ E +
Sbjct: 127 RGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAI 186
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA--DVSVCNTWIS 184
++FY M L G++A+ +T +G+ A K L + K V D D S ++
Sbjct: 187 QVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVN 246
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y C DL+ A F RL +++ +M+ T +++D++L ++ M+ G +LD
Sbjct: 247 FYGSCGDLEQAFRAFS--RHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+++L++ P L +GR++H FD V+ N LI+MY KCG ++ A +F
Sbjct: 304 IACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRS 363
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ R +SW +I+ + Q EAL L M+ G D ++ ++ + C S AL G
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKG 423
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ ++ G+K +VM+ NA++DMY C S DA +F A+ + VSW MI A
Sbjct: 424 RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQ 483
Query: 425 GEF-VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
EAL LF Q+ P+ ++F+A L AC L +G + + + G+ N
Sbjct: 484 PRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLH-DRIRETGLESNMT 542
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + + ++ + G L A MP+ D W ++ A H
Sbjct: 543 V--ANAVLNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISAFAQH 585
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 220/465 (47%), Gaps = 38/465 (8%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG- 136
G ++ +V C L A FD M V+D +W ++ Q+G E L LF +M+L G
Sbjct: 36 GDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGV 95
Query: 137 --IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKM 194
+ +FV V+G A + L + +H +++D V T + Y KC ++
Sbjct: 96 APVNRNFVAVLGACSA--DPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVED 153
Query: 195 AELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF 254
A VF GI R + VV WN+M+ D + ++ + M+ G + + T + +L +
Sbjct: 154 ARKVFDGI--RHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDAC 211
Query: 255 VCPEALVQGRLV--------HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ L +LV H H +H D S L++ Y CGD++ A F
Sbjct: 212 SKLKDLEVAKLVKLCVEEREHDH-LH-----DSSFATALVNFYGSCGDLEQAFRAF---- 261
Query: 307 DRTRVSW---TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
R R+ TAMI+ Y Q+ DEAL LF M G D + +++++ C LE
Sbjct: 262 SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEE 321
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
G+ + +V NALI+MY KCGS+ +A E+F ++ + V+SW T+IA
Sbjct: 322 GRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQ 381
Query: 424 NGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKGISY 480
+ + EAL L H LM+LD ++ ++++F+ L C + L KG I I++ GI
Sbjct: 382 HSQHPEALHLLH-LMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVE---SGIKA 437
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ LD + + D+ G +A ++M ++ D W ++ A
Sbjct: 438 DVMLD--NAILDMYGSCKSTDDASRVFRAMKVR-DQVSWNAMITA 479
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 250 LLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRT 309
LL +L G+ VH+ D + + L+ MY CG + A+ FD + +
Sbjct: 4 LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63
Query: 310 RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGA-LELGKWFD 368
++W +I + Q GD ++AL LF +M+ G P ++++ C LE G+
Sbjct: 64 ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
++ + V L+ MY KC S+ DAR++F + K VV W MI A
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+A+ +F+ ++ ++ R+TF+ VL AC+ LE
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLE 218
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
S +L+LGK C + + + L+ MY CGS+ DA+ F +P + ++W +
Sbjct: 11 SRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARL 70
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT-HTGFLEKGWAISIIQYDDK 476
I G+ +AL LF + + P F+AVL AC+ LE+G I + +
Sbjct: 71 IRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVL---R 127
Query: 477 GISYNPELDHY 487
G + E DHY
Sbjct: 128 GTAM--ESDHY 136
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 181/634 (28%), Positives = 298/634 (47%), Gaps = 22/634 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH-- 79
WN+ I V + + L LFRQM+ + PN T AC D + IH
Sbjct: 208 WNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFAR 267
Query: 80 --------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+V++ V K ++D A +IF+ + RDV SWNAML A GF + +
Sbjct: 268 ELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFK 327
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV---DADVSVCNTWIS 184
F M LVG +T + + A A HL V + + G DV + ++
Sbjct: 328 CFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMN 387
Query: 185 SYAKCDDLKMA--ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
Y++C K A + + +++ WN++++ ++F+++ +R M+ G +
Sbjct: 388 MYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTI 447
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D +++++ ++ +L +G+ +HS V N L++MY++ G ++ AR +F
Sbjct: 448 DTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIF 507
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D + R +SWTAM+ ++Q G EALR+F ++ G P+ VT ++++ CG ++
Sbjct: 508 DAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIP 567
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
K G NV V N L+ KCGS+ + F + K VSW T IA A
Sbjct: 568 AAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANA 627
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+G V ++LF + + VT + VL +C+H G + +G++ + + D G +
Sbjct: 628 QHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYG--FPA 685
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI-WGTLLCACKIHLNIEIGEYVAYC 541
E +HYSC+ DLL R G L+ A +FV+ +P + W TLLC CK+H ++E G
Sbjct: 686 EAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQR 745
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+ L P S PY+ M N YA G+W A +R M KK PG S + G+ F
Sbjct: 746 ILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRV 805
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
D H S + L+ L + + +K +
Sbjct: 806 GDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAV 839
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 252/538 (46%), Gaps = 29/538 (5%)
Query: 15 RSSTINQWNSQIREAVNKNEAH--KTLLLFRQMKQNDIEPNNLTFPFIAKACAKL--SDL 70
+ ++ W S I VN H + LFR+M+ + PN++T+ + AC D
Sbjct: 102 QDKSVVAWTSLI--GVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDT 159
Query: 71 IYSQ----------MIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
I ++ +I V + + KC LD A+ +FD + VRD A WNAM+
Sbjct: 160 IRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHE 219
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ L LF MRL G+ + T + A H++ S +H+F + DAD V
Sbjct: 220 QGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQT 279
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ Y K + AE +F I+E R VVSWN+M+ D + +R M+ G
Sbjct: 280 ALVNMYGKFGKVDDAEEIFERIQE--RDVVSWNAMLTANACNGFHDKAFKCFREMLLVGE 337
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF---DLDVSVINTLISMYSKCGDIDS 297
T V++L++ L G V + + G +DV + +++MYS+C S
Sbjct: 338 LPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKS 397
Query: 298 A---RVLFDGICDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
A +L + D+ + W ++S Y + +EA +F M G D V+++++ +
Sbjct: 398 AFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFN 457
Query: 354 GCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
CG S +LE GKW + L V NAL+ MY++ GS+ DARE+F A+ + V+S
Sbjct: 458 ACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVIS 517
Query: 414 WTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQY 473
WT M+ + G EAL +F ++ + PN VTF AVL AC G L A ++Q
Sbjct: 518 WTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNAC---GNLASIPAAKLVQA 574
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLN 531
+ ++ + + LG+ G L+E +F Q M +K+ W T + A H N
Sbjct: 575 CLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVS-WNTAIAANAQHGN 631
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 226/489 (46%), Gaps = 30/489 (6%)
Query: 48 NDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDC 93
+D + TF + CA+L DL + IHG I+++ + KC +
Sbjct: 34 DDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEE 93
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A +F + + V +W +++ A+ G + LF M+L G+ + VT + + A H
Sbjct: 94 ARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGH 153
Query: 154 AKHLSLLKS-VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+ +++ V + G ++ DV V +++Y KC DL A VF GI +R W
Sbjct: 154 PWEVDTIRARVEACG---SLELDVIVATAVMNAYGKCGDLDSAWGVFDGI--LVRDAAVW 208
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
N+M++ ++ D++L +R M G + T V+ L++ + +H+
Sbjct: 209 NAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARE 268
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRL 332
D D V L++MY K G +D A +F+ I +R VSW AM++ A G D+A +
Sbjct: 269 LAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKC 328
Query: 333 FFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL---KDNVMVCNALIDM 389
F M GELP +T +++++ C + L+ G + A GG +V++ A+++M
Sbjct: 329 FREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNM 388
Query: 390 YSKCGSIGDARELFYALP----EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
YS+C S A L + ++ W T+++ N +F EA +F ++ + +
Sbjct: 389 YSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTID 448
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
V+ + V AC + LEKG I + + + P + + + R G L++A +
Sbjct: 449 TVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPV---QNALVTMYARLGSLEDARE 505
Query: 506 FVQSMPIKS 514
+M ++
Sbjct: 506 IFDAMTTRN 514
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 6/283 (2%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D +T +L+ L QGR +H + G ++ + L++MY KCG + AR +F
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
GI D++ V+WT++I A+ G EA LF M+ G +P+ VT ++++ CG E
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHP--WE 156
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
+ G L+ +V+V A+++ Y KCG + A +F + + W MI+
Sbjct: 157 VDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLV 216
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNP 482
+ + EAL+LF Q+ + PN+ T +A L AC H+ + I + G +
Sbjct: 217 AHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAG---DA 273
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + + ++ G+ GK+ +A + + + + D W +L A
Sbjct: 274 DTVVQTALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNAMLTA 315
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 181/613 (29%), Positives = 302/613 (49%), Gaps = 19/613 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W + I VN +++ L+LF M + ++ + KACA ++ + +++HG
Sbjct: 118 WTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFS 177
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VKS ++K + + +F+ M R+V SW A++VG G + L
Sbjct: 178 VKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGL 237
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M + D T +A+ + L K++H+ I G + V NT + Y
Sbjct: 238 SYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMY 297
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+KC +F + VVSW +++ + +L+ ++ M + + T
Sbjct: 298 SKCRKPDYVMRLFGKMSTP--DVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYT 355
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
S++S+ G +H H + G +SV N++I++YSKCG + A ++FDG+
Sbjct: 356 FASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMT 415
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW+ +IS Y Q EA M G P+ + S++S CG LE GK
Sbjct: 416 RKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQ 475
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
YA GL MV +ALI MYS+ G++ +A ++F ++ +VSWT MI G A +G
Sbjct: 476 VHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGY 535
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
EA+ LF + + L P+ VTF+ +L AC H G ++ G+ + ++ I+ P +H
Sbjct: 536 SQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIA--PSKEH 593
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y C+ DLL R G+L EA V++MP D +W TLL AC+ H +++ + A + +L
Sbjct: 594 YGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLH 653
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P+SA ++ +AN Y+ GR + A++R +MK V K PG S + N + TF A + H
Sbjct: 654 PNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSH 713
Query: 607 AESELTYPVLDCL 619
S+ +L+ L
Sbjct: 714 PLSKQITTILELL 726
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 1/263 (0%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRL 265
R +SW +++AG +++L + +M + G + D V L + + G L
Sbjct: 113 RDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGEL 172
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H + G V V + L+ MY K G + +F+ + R VSWTA+I G G
Sbjct: 173 LHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGC 232
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ L F M + D T + +SG L GK G + V N
Sbjct: 233 SLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNT 292
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L MYSKC LF + VVSWT +I G+ ALD F ++ + D+ PN
Sbjct: 293 LGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPN 352
Query: 446 RVTFLAVLQACTHTGFLEKGWAI 468
TF +V+ AC + + G I
Sbjct: 353 EYTFASVISACANLAITKWGEQI 375
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 3/259 (1%)
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT-TVVSLLSSFVCPEALVQGRLVHSHG 270
W G + G DDS +F + L+ V ++ C + + QG+
Sbjct: 17 WVRRCYGSSPGLSLDDSFSFIPNTSLCSTNLNPPLNYVYPGTATECRDMIWQGKPEQRAP 76
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
Y + ++ +N+ + K G I AR +F+ + R +SWT +I+GY + +EAL
Sbjct: 77 TAY-YVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEAL 135
Query: 331 RLFFAMEA-AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDM 389
LF M +G D V + C + G+ ++ GL ++V V +AL+DM
Sbjct: 136 ILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDM 195
Query: 390 YSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTF 449
Y K G +F + + VVSWT +I G G ++ L F ++ + + TF
Sbjct: 196 YMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTF 255
Query: 450 LAVLQACTHTGFLEKGWAI 468
L+A +G L G AI
Sbjct: 256 AVALKASAESGLLHYGKAI 274
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS---------- 68
I W++ I + A + M + +PN + C ++
Sbjct: 419 IISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHA 478
Query: 69 -----DLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
L + M+H ++ S + + L A KIFD + D+ SW AM+ G+A+ G+ +
Sbjct: 479 YALCIGLDHETMVHSALI-SMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQ 537
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ LF N+ VG+ D+VT +G+ A HA
Sbjct: 538 EAISLFENISSVGLMPDYVTFIGILTACNHA 568
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 181/594 (30%), Positives = 302/594 (50%), Gaps = 23/594 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI S ++ W + N+A L +FR+M+ + +E N+ T + AC + S
Sbjct: 130 FSRISNPSVVS-WTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSM 188
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMA-VRDVASWNAMLV 114
+ + +H + KS F K ++ + ++F+++ +R N M+
Sbjct: 189 VCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVT 248
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
F+Q +RLF M G+ D +V L L+L K VHS+ + G+
Sbjct: 249 SFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVL---DCLNLGKQVHSYTLKSGLIL 305
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D++V ++ + Y+KC L+ + +F I + W SM++G +++ +
Sbjct: 306 DLTVGSSLFTMYSKCGSLEESYSLFQEIP--FKDNACWASMISGFNEYGYLREAIGLFSE 363
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G D +T+ ++L+ +L + + +H + + G D + + + L++ YSKCG
Sbjct: 364 MLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGS 423
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ AR ++D + + VS +++ISGY+Q G + + LF M +G D + S++
Sbjct: 424 LKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKA 483
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
S ELG Y GL V ++L+ MYSK GSI D + F + +++W
Sbjct: 484 AVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAW 543
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
T +IA A +G+ EAL ++ + E +P++VTF+ VL AC+H G +E+G+
Sbjct: 544 TALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVK 603
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D GI PE HY CM D LGR G+L+EA +F+ + PIK DA +WGTLL ACKI+ ++E+
Sbjct: 604 DYGI--EPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVEL 661
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
G+ A +LEP A YV ++N A G WD V R +MK V+K PG S
Sbjct: 662 GKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 715
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 222/461 (48%), Gaps = 22/461 (4%)
Query: 12 RIYR---SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+++R S+ + WN+ I A+ LF +M +P++ T+ + ACA L
Sbjct: 28 KVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACASLE 87
Query: 69 DLIYSQMIHGHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
+L + +++ ++K + KC + A ++F ++ V SW ML G
Sbjct: 88 ELRFGKVVQARVIKCGAEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSG 147
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ + + L +F MR G++ + TV + A + VH++ G D
Sbjct: 148 YTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 207
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEE-RLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
SV IS +K D+ ++E VF +++ R + +V N MV + K ++ +
Sbjct: 208 TSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV--NVMVTSFSQNKKPGKAIRLFTR 265
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G D +V SLLS C L G+ VHS+ + G LD++V ++L +MYSKCG
Sbjct: 266 MLQEGLNPDEFSVCSLLSVLDC---LNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGS 322
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
++ + LF I + W +MISG+ + G L EA+ LF M G PD T+ ++++
Sbjct: 323 LEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTV 382
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C +L K Y G+ + + +AL++ YSKCGS+ AR+++ LPE VS
Sbjct: 383 CSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSC 442
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+++I+G + +G + LF ++ + ++L+A
Sbjct: 443 SSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKA 483
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 187/385 (48%), Gaps = 7/385 (1%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTV 144
F K R + AYK+F + +V WN ++ G + V LF+ M + D T
Sbjct: 17 FSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTY 76
Query: 145 MGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEE 204
+ A + L K V + I G + DV VC + + YAKC + A VF I
Sbjct: 77 SSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAREVFSRISN 135
Query: 205 RLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR 264
+VVSW M++G T + +L +R M ++G ++ TV S++S+ P + +
Sbjct: 136 --PSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEAS 193
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD-RTRVSWTAMISGYAQK 323
VH+ GF LD SV LISM SK GDI+ + +F+ + D R + M++ ++Q
Sbjct: 194 QVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQN 253
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
+A+RLF M G PD +V S++S L LGK +Y GL ++ V
Sbjct: 254 KKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVL---DCLNLGKQVHSYTLKSGLILDLTVG 310
Query: 384 NALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
++L MYSKCGS+ ++ LF +P K W +MI+G G EA+ LF ++++
Sbjct: 311 SSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTS 370
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
P+ T AVL C+ L + I
Sbjct: 371 PDESTLAAVLTVCSSLPSLPRSKEI 395
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 33/328 (10%)
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVH 267
V WN+++AG + + + H M NGF + D T S+L++ E L G++V
Sbjct: 38 VYCWNTIIAGALRNQNYGAVFDLF-HEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQ 96
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
+ I G + DV V +++ +Y+KCG + AR +F I + + VSWT M+SGY + D
Sbjct: 97 ARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAF 155
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
AL +F M +G + TV S+IS CG+ + + G + V ALI
Sbjct: 156 SALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALI 215
Query: 388 DMYSKCGSIGDARELFYALP----EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
M SK G I + +F L + IV M+ + N + +A+ LF ++++ L
Sbjct: 216 SMNSKSGDINLSERVFEDLDDIRRQNIV---NVMVTSFSQNKKPGKAIRLFTRMLQEGLN 272
Query: 444 PNRVTFLAVLQAC--------THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLG 495
P+ + ++L H+ L+ G + +L S + +
Sbjct: 273 PDEFSVCSLLSVLDCLNLGKQVHSYTLKSGLIL--------------DLTVGSSLFTMYS 318
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ G L+E+ Q +P K +A W +++
Sbjct: 319 KCGSLEESYSLFQEIPFKDNA-CWASMI 345
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V ++LI +SK + A +F W +I+G + + LF M
Sbjct: 9 VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
+ PD T S+++ C L GK G +D V VC +++D+Y+KCG + +AR
Sbjct: 69 QKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAED-VFVCTSIVDLYAKCGHMAEAR 127
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
E+F + VVSWT M++G + + AL++F ++ + N T +V+ AC
Sbjct: 128 EVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISAC 183
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
+V ++LID +SK DA ++F V W T+IAG N + DLFH++
Sbjct: 8 VVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNG 67
Query: 441 DLRPNRVTFLAVLQAC 456
+P+ T+ +VL AC
Sbjct: 68 FQKPDSYTYSSVLAAC 83
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 296/615 (48%), Gaps = 21/615 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ + V + + +F+ M + ++ + TF I AC LS + +H
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 79 HIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K S FV LD A +F + +D SWNA+ VG AQ E
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ + MRL GI D V+ A + + K +H I G+ ++ +V ++ I
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 570
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+K D++ + +F ++ ++V N+++AG + D+++ ++ ++ +G +
Sbjct: 571 LYSKHGDVESSRKIFAQVDAS--SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 628
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFD 303
T S+LS G+ VH + + G D +++ +L +Y K ++ A L
Sbjct: 629 VTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLT 688
Query: 304 GICDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ D + WTA+ISGYAQ G D +L F+ M D T S++ C A
Sbjct: 689 EMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFA 748
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
GK G +ALIDMYSKCG + + E F L K ++ W +MI G
Sbjct: 749 DGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGF 808
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A NG EAL LF ++ EL ++P+ VTFL VL ACTH+G + +G G++
Sbjct: 809 AKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLT-- 866
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P LDHY+C DLLGR G L+EA + + +P + D +W T L AC++H + E G+ A
Sbjct: 867 PRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARK 926
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +LEP ++ YV +++ +A G W R M+ V KFPG S + KT F
Sbjct: 927 LVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLV 986
Query: 602 EDRYHAESELTYPVL 616
+D+YH ++ Y +L
Sbjct: 987 QDKYHPDNLRIYEML 1001
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 214/442 (48%), Gaps = 6/442 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S RLD A + +M +WNA++ G AQ G NVL L+ +MR G+
Sbjct: 267 STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRS 326
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + AA + K + +H+ + G+DA+V V ++ I+ YAKC A+ VF
Sbjct: 327 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLS 386
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E+ +V WN+M+ G + ++++ +++MM + D T VS+L + +
Sbjct: 387 CEK--NIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ VH I D+ + V N + MYSK G I A+ LF I + +SW A+ G AQ
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+ +EA+ + M G PD V+ + I+ C A E GK A G+ N V
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
++LID+YSK G + +R++F + +V +IAG N EA+ LF Q+++ L
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-GISYNPELDHYSCMADLLGRKGKLK 501
+P+ VTF ++L C +G L + Y K G+ Y+ L S +A + + L+
Sbjct: 625 KPSSVTFSSILSGC--SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVS-LAGIYLKSKMLE 681
Query: 502 EALDFVQSMPIKSDAGIWGTLL 523
+A + MP + W ++
Sbjct: 682 DANKLLTEMPDHKNLFEWTAII 703
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 213/469 (45%), Gaps = 58/469 (12%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYK 96
P+ + AC+++ L Y + +H +VKS F KC + A +
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD +A D W++M+ + ++G + L LF M +G D VT++
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV----------- 263
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
T IS+ A L A + + + V+WN+++
Sbjct: 264 ------------------------TIISTLASSGRLDHATALLKKMPTP--STVAWNAVI 297
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G + L Y+ M G +T S+LS+ +A V+G+ +H+ + +G D
Sbjct: 298 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+V V ++LI++Y+KCG A+ +FD C++ V W AM++G+ Q +EA+R+F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
D T +S++ C + LGK + ++ V NA +DMYSK G+I
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
GDA+ LF +P K +SW + G A N E EA+ + ++ + P+ V+F + AC
Sbjct: 478 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 457 THTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
++ E G I I+Y GI N + S + DL + G ++ +
Sbjct: 538 SNIRATETGKQIHCLAIKY---GICSNHAVG--SSLIDLYSKHGDVESS 581
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 37/239 (15%)
Query: 227 DSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D L +R++ G R D + +LS+ L GR VH + GF V L
Sbjct: 140 DVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAAL 199
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+ MY+KCGD+ +AR +FDGI + W++MI+ Y + G EAL LF M+ G PD
Sbjct: 200 VDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQ 259
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
VT++++IS SG L+ A L
Sbjct: 260 VTLVTIISTLASSGRLD-----------------------------------HATALLKK 284
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH-TGFLE 463
+P V+W +I+G A +G L L+ + L P R TF ++L A + F+E
Sbjct: 285 MPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVE 343
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H + G L + ++L+ +Y K G + A +R + ++++S +A+
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 324 GDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G + L F + AG PD + ++S C + G L G+ G +V
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+DMY+KCG + +AR +F + + W++MIA G + EAL LF ++ ++
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAI 468
P++VT + ++ +G L+ A+
Sbjct: 256 APDQVTLVTIISTLASSGRLDHATAL 281
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 17/265 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S+I N+ I V N + + LF+Q+ ++ ++P+++TF I C+ + +
Sbjct: 590 ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQ 649
Query: 76 IHGHIVKSP---------------FVKCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQM 119
+H + +KS ++K L+ A K+ EM +++ W A++ G+AQ
Sbjct: 650 VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQN 709
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G+ ++ L F+ MR +++D T + +A + K +H G + +
Sbjct: 710 GYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETAT 769
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ I Y+KC D+ + F ++ + + ++ WNSM+ G D++L ++ M
Sbjct: 770 SALIDMYSKCGDVISSFEAFKELKNK-QDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 828
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGR 264
+ D T + +L + + +GR
Sbjct: 829 IKPDEVTFLGVLIACTHSGLISEGR 853
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 294/581 (50%), Gaps = 15/581 (2%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDE 100
L Q + L IA A SD+I S HI+ + + KC +L A ++FDE
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSN----HIL-NLYAKCRKLREARQVFDE 63
Query: 101 MAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL 160
M+ R++ SW+AM+ G+ Q+G + L LF + +V + + +V+ A K L
Sbjct: 64 MSERNLVSWSAMISGYEQIGEPISALGLFSKLNIVPNEYVYASVI---SACASLKGLVQG 120
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR-TVVSWNSMVAGC 219
K +H + G+D+ V N I+ Y KC A L + E L V++N+++ G
Sbjct: 121 KQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAY---NEALELNPVAYNALITGF 177
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ D R M +GF D T V LL + + L +G L+H I +
Sbjct: 178 VENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTA 237
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
+ N +I+MYSK ++ A F I ++ +SW IS + D ++AL F M
Sbjct: 238 FIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNE 297
Query: 340 GEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
+ PD T S ++ C ++ GK + L +V NALI+MY+KCG I
Sbjct: 298 CRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAK 357
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F + + +VSW TMIAG +G +A +LF ++ + ++P+ VTF+ +L A H
Sbjct: 358 AYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNH 417
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI 518
G +++G + GIS PE++H+SC+ DLLGR G+L EA ++++ P D +
Sbjct: 418 AGLVDEGLVYFNSMEETYGIS--PEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVV 475
Query: 519 WGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
G+LL AC++H +++ G+ A L KL+P + +PYV ++N YA WDGVA ++K
Sbjct: 476 LGSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKG 535
Query: 579 NQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+ +KK PG SL +NG FT D H+ E +L L
Sbjct: 536 SGLKKEPGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKIL 576
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V SL+ +AL QG +H+ I DV V N ++++Y+KC + AR +FD +
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R VSW+AMISGY Q G+ AL LF + +P+ S+IS C L GK
Sbjct: 66 ERNLVSWSAMISGYEQIGEPISALGLFSKLNI---VPNEYVYASVISACASLKGLVQGKQ 122
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
A GL V NALI MY KCG DA + E V++ +I G N +
Sbjct: 123 IHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQ 182
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ ++ + + P+R TF+ +L C L++G
Sbjct: 183 PDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRG 221
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 120/295 (40%), Gaps = 20/295 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH---- 77
+N+ I V + K + R M Q+ P+ TF + C DL +++H
Sbjct: 170 YNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTI 229
Query: 78 ----------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
G+++ + + K + L+ A K F + +D+ SWN + + E L
Sbjct: 230 KLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALE 289
Query: 128 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
F M ++ D T A + K +H I + DV N I+ Y
Sbjct: 290 AFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMY 349
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
AKC + A +F +E + +VSWN+M+AG + + M G + D T
Sbjct: 350 AKCGCIAKAYYIFSKMEH--QNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVT 407
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIH--YGFDLDVSVINTLISMYSKCGDIDSAR 299
V LL++ LV LV+ + + YG ++ + LI + + G ++ A+
Sbjct: 408 FVGLLTA-SNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAK 461
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 278/547 (50%), Gaps = 10/547 (1%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
+S + H + + +VKC +L A +FD M +R+V SWN ++ G+ G VL LF N
Sbjct: 47 HSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKN 106
Query: 132 MRLVGIQA----DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
M V +Q ++V L+ A H + H G+ V + + Y+
Sbjct: 107 M--VSLQNACPNEYVFTTALS-ACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYS 163
Query: 188 KCDDLKMAELVFCGIE-ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
+C +++A V + E + + S+NS++ + ++++ R M+ D T
Sbjct: 164 RCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVT 223
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V ++ L G VH+ + G D V + LI MY KCG++ +AR +FDG+
Sbjct: 224 YVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQ 283
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+R V WTA+++ Y Q G +E+L LF M+ G LP+ T +++ C AL G
Sbjct: 284 NRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDL 343
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
G K++V+V NALI+MYSK GSI + +F + + +++W MI G + +G
Sbjct: 344 LHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGL 403
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+AL +F ++ + PN VTF+ VL A +H G +++G+ + + + P L+H
Sbjct: 404 GKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGF--YYLNHLMRNFKIEPGLEH 461
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM LL R G L EA +F+++ +K D W TLL AC +H N ++G +A + +++
Sbjct: 462 YTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMD 521
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
PH Y ++N YA RWDGV IR +M+ +KK PG S I F +E H
Sbjct: 522 PHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNH 581
Query: 607 AESELTY 613
ES Y
Sbjct: 582 PESIQIY 588
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 135/310 (43%), Gaps = 21/310 (6%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDL-----IYS 73
I +NS + V + + + R+M + +++T+ + CA++ DL +++
Sbjct: 186 IFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHA 245
Query: 74 QMIHGHIVKSPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+++ G ++ FV KC + A +FD + R+V W A++ + Q G+ E
Sbjct: 246 RLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEE 305
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L LF M G + T L A L +H+ +G V V N I+
Sbjct: 306 SLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALIN 365
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+K + + VF + R +++WN+M+ G ++ +L ++ M+ +
Sbjct: 366 MYSKSGSIDSSYNVF--TDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNY 423
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T + +LS++ + +G +H + ++ + + ++++ S+ G +D A +
Sbjct: 424 VTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEA----E 479
Query: 304 GICDRTRVSW 313
T+V W
Sbjct: 480 NFMKTTQVKW 489
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + + + ++L LF M + PN TF + ACA ++ L + ++H +
Sbjct: 290 WTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVE 349
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K F K +D +Y +F +M RD+ +WNAM+ G++ G + L+
Sbjct: 350 KLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQ 409
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI----GVDADVSVCNTWI 183
+F +M ++VT +G+ A HL L+K + H+ ++ + +
Sbjct: 410 VFQDMVSAEECPNYVTFIGVLSA---YSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMV 466
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ ++ L AE F + VV+W +++ C +D
Sbjct: 467 ALLSRAGLLDEAE-NFMKTTQVKWDVVAWRTLLNACHVHRNYD 508
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 296/615 (48%), Gaps = 21/615 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ + V + + +F+ M + ++ + TF I AC LS + +H
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 79 HIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K S FV LD A +F + +D SWNA+ VG AQ E
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ + MRL GI D V+ A + + K +H I G+ ++ +V ++ I
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 570
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+K D++ + +F ++ ++V N+++AG + D+++ ++ ++ +G +
Sbjct: 571 LYSKHGDVESSRKIFAQVDAS--SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 628
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFD 303
T S+LS G+ VH + + G D +++ +L +Y K ++ A L
Sbjct: 629 VTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLT 688
Query: 304 GICDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ D + WTA+ISGYAQ G D +L F+ M D T S++ C A
Sbjct: 689 EMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFA 748
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
GK G +ALIDMYSKCG + + E F L K ++ W +MI G
Sbjct: 749 DGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGF 808
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A NG EAL LF ++ EL ++P+ VTFL VL ACTH+G + +G G++
Sbjct: 809 AKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLT-- 866
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P LDHY+C DLLGR G L+EA + + +P + D +W T L AC++H + E G+ A
Sbjct: 867 PRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARK 926
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +LEP ++ YV +++ +A G W R M+ V KFPG S + KT F
Sbjct: 927 LVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLV 986
Query: 602 EDRYHAESELTYPVL 616
+D+YH ++ Y +L
Sbjct: 987 QDKYHPDNLRIYEML 1001
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 214/442 (48%), Gaps = 6/442 (1%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S RLD A + +M +WNA++ G AQ G NVL L+ +MR G+
Sbjct: 267 STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRS 326
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + AA + K + +H+ + G+DA+V V ++ I+ YAKC A+ VF
Sbjct: 327 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLS 386
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E+ +V WN+M+ G + ++++ +++MM + D T VS+L + +
Sbjct: 387 CEK--NIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ VH I D+ + V N + MYSK G I A+ LF I + +SW A+ G AQ
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
+ +EA+ + M G PD V+ + I+ C A E GK A G+ N V
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
++LID+YSK G + +R++F + +V +IAG N EA+ LF Q+++ L
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-GISYNPELDHYSCMADLLGRKGKLK 501
+P+ VTF ++L C +G L + Y K G+ Y+ L S +A + + L+
Sbjct: 625 KPSSVTFSSILSGC--SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVS-LAGIYLKSKMLE 681
Query: 502 EALDFVQSMPIKSDAGIWGTLL 523
+A + MP + W ++
Sbjct: 682 DANKLLTEMPDHKNLFEWTAII 703
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 213/469 (45%), Gaps = 58/469 (12%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYK 96
P+ + AC+++ L Y + +H +VKS F KC + A +
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD +A D W++M+ + ++G + L LF M +G D VT++
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV----------- 263
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
T IS+ A L A + + + V+WN+++
Sbjct: 264 ------------------------TIISTLASSGRLDHATALLKKMPTP--STVAWNAVI 297
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G + L Y+ M G +T S+LS+ +A V+G+ +H+ + +G D
Sbjct: 298 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+V V ++LI++Y+KCG A+ +FD C++ V W AM++G+ Q +EA+R+F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
D T +S++ C + LGK + ++ V NA +DMYSK G+I
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
GDA+ LF +P K +SW + G A N E EA+ + ++ + P+ V+F + AC
Sbjct: 478 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 457 THTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
++ E G I I+Y GI N + S + DL + G ++ +
Sbjct: 538 SNIRATETGKQIHCLAIKY---GICSNHAVG--SSLIDLYSKHGDVESS 581
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 37/239 (15%)
Query: 227 DSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D L +R++ G R D + +LS+ L GR VH + GF V L
Sbjct: 140 DVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAAL 199
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+ MY+KCGD+ +AR +FDGI + W++MI+ Y + G EAL LF M+ G PD
Sbjct: 200 VDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQ 259
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
VT++++IS SG L+ A L
Sbjct: 260 VTLVTIISTLASSGRLD-----------------------------------HATALLKK 284
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH-TGFLE 463
+P V+W +I+G A +G L L+ + L P R TF ++L A + F+E
Sbjct: 285 MPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVE 343
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H + G L + ++L+ +Y K G + A +R + ++++S +A+
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 324 GDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G + L F + AG PD + ++S C + G L G+ G +V
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+DMY+KCG + +AR +F + + W++MIA G + EAL LF ++ ++
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAI 468
P++VT + ++ +G L+ A+
Sbjct: 256 APDQVTLVTIISTLASSGRLDHATAL 281
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 17/265 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S+I N+ I V N + + LF+Q+ ++ ++P+++TF I C+ + +
Sbjct: 590 ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQ 649
Query: 76 IHGHIVKSP---------------FVKCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQM 119
+H + +KS ++K L+ A K+ EM +++ W A++ G+AQ
Sbjct: 650 VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQN 709
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G+ ++ L F+ MR +++D T + +A + K +H G + +
Sbjct: 710 GYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETAT 769
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ I Y+KC D+ + F ++ + + ++ WNSM+ G D++L ++ M
Sbjct: 770 SALIDMYSKCGDVISSFEAFKELKNK-QDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 828
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGR 264
+ D T + +L + + +GR
Sbjct: 829 IKPDEVTFLGVLIACTHSGLISEGR 853
>gi|326528345|dbj|BAJ93354.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 254/476 (53%), Gaps = 20/476 (4%)
Query: 159 LLKSV-----HSFGIHIGVDADVS-VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+LKSV H+ G+ + D D + N+ I Y C D A VF G+ + R VVSW
Sbjct: 124 VLKSVPGRVAHAHGLRL-TDGDTRFLHNSLIPMYFSCGDAGRARRVFDGMRDCERDVVSW 182
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIH 272
S+++ +L + MM R D +V++L +++ + L + HS +
Sbjct: 183 TSLISRLVQSGSPLQALRLFAAMMCCDVRPDFVLLVTVLKAYMELDDLPGAQSAHSLVVK 242
Query: 273 YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS---WTAMISGYAQKGDLDEA 329
GFD + V+ TL +MY+K G I +AR LFD I RV+ W AMISGY++ G EA
Sbjct: 243 GGFDDEQDVVTTLTAMYAKFGCIVAARALFDRI-PPPRVNVILWNAMISGYSKNGLASEA 301
Query: 330 LRLFFAME--AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
+ LF M+ A PD VT+ S+I C Q G+ EL W ++Y +++V+V ALI
Sbjct: 302 VHLFKQMQVFARSMSPDSVTLRSVIMACAQLGSTELAVWMEDYVRRSECREDVLVNTALI 361
Query: 388 DMYSKCGSIGDARELFYAL--PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
DMY+K GSI AR +F + E+ VV W+ +I+G +G EA+ LF + ++PN
Sbjct: 362 DMYAKSGSIAHARRVFEQMHAQERDVVVWSALISGYGAHGHLAEAVGLFEDMKLAGVKPN 421
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
VTFL +L AC H G +EKGW D I P HY+C+ DLL R G+L A
Sbjct: 422 DVTFLGLLSACNHAGAVEKGWFYFHSMKPDHKI--EPRHQHYACVVDLLARAGQLDRAYR 479
Query: 506 FVQSMPIKSDAGIWGTLLCACKI--HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALG 563
F+ MPIK + +WG LL CK+ H N+ + E A +F+LE +A YV++AN YA
Sbjct: 480 FILDMPIKPEMSVWGALLHGCKVHEHSNMAMAERAAQHIFELEQSNAGHYVQLANMYASA 539
Query: 564 GRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
G W VA +R M+ V K G S ++G+T F A D H + + +L CL
Sbjct: 540 GMWSHVAGVRATMRERGVTKATGCSSIEVDGETHNFHAWDHSHPRAAEIFALL-CL 594
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 161/348 (46%), Gaps = 8/348 (2%)
Query: 85 FVKCDRLDCAYKIFDEM--AVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
+ C A ++FD M RDV SW +++ Q G LRLF M ++ DFV
Sbjct: 156 YFSCGDAGRARRVFDGMRDCERDVVSWTSLISRLVQSGSPLQALRLFAAMMCCDVRPDFV 215
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
++ + +A + L +S HS + G D + V T + YAK + A +F I
Sbjct: 216 LLVTVLKAYMELDDLPGAQSAHSLVVKGGFDDEQDVVTTLTAMYAKFGCIVAARALFDRI 275
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY--NGFRLDVTTVVSLLSSFVCPEAL 260
V+ WN+M++G + ++++ ++ M D T+ S++ + +
Sbjct: 276 PPPRVNVILWNAMISGYSKNGLASEAVHLFKQMQVFARSMSPDSVTLRSVIMACAQLGST 335
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR--VSWTAMIS 318
+ + DV V LI MY+K G I AR +F+ + + R V W+A+IS
Sbjct: 336 ELAVWMEDYVRRSECREDVLVNTALIDMYAKSGSIAHARRVFEQMHAQERDVVVWSALIS 395
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLK 377
GY G L EA+ LF M+ AG P+ VT L ++S C +GA+E G +F + ++
Sbjct: 396 GYGAHGHLAEAVGLFEDMKLAGVKPNDVTFLGLLSACNHAGAVEKGWFYFHSMKPDHKIE 455
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN 424
++D+ ++ G + A +P K +S W ++ GC ++
Sbjct: 456 PRHQHYACVVDLLARAGQLDRAYRFILDMPIKPEMSVWGALLHGCKVH 503
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 221/371 (59%), Gaps = 2/371 (0%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
+G VHS I GF+ V V NTL+ MY+ CG +SA LF+ + +R V+W ++I+GYA
Sbjct: 13 EGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYA 72
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
G +EAL LF M G PD T++S++S C + GAL LG+ Y GL N+
Sbjct: 73 LNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLH 132
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
NAL+D+Y+KCGSI A ++F + EK VVSWT++I G A+NG EAL+LF +L
Sbjct: 133 AGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKG 192
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLK 501
L P+ +TF+ VL AC+H G +++G+ ++ GI P+++HY CM DLLGR G +K
Sbjct: 193 LMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIV--PKIEHYGCMVDLLGRAGLVK 250
Query: 502 EALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYA 561
+A +F+Q+MP++ +A +W TLL AC IH ++ +GE L +LEP + YV ++N YA
Sbjct: 251 QAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYA 310
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
RW V +R M R VKK PG SL + + F DR H ++E Y L +
Sbjct: 311 SEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITK 370
Query: 622 HSREEAYSSHL 632
+ E Y H+
Sbjct: 371 LLKLEGYVPHI 381
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 4/285 (1%)
Query: 161 KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT 220
+ VHS I G ++ V V NT + YA C + A +F + ER +V+WNS++ G
Sbjct: 15 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAER--NLVTWNSVINGYA 72
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+ +++L +R M G D T+VSLLS+ AL GR H + + G D ++
Sbjct: 73 LNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLH 132
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
N L+ +Y+KCG I A +FD + +++ VSWT++I G A G EAL LF +E G
Sbjct: 133 AGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKG 192
Query: 341 ELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
+P +T + ++ C G ++ G +F G+ + ++D+ + G + A
Sbjct: 193 LMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQA 252
Query: 400 RELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
E +P + V W T++ C ++G QL++L+ +
Sbjct: 253 HEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPK 297
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRD 105
+ +A AKL D+ + +H +++ F C + A+K+F+ MA R+
Sbjct: 1 MQRAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERN 60
Query: 106 VASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHS 165
+ +WN+++ G+A G L LF M L G++ D T++ L A L+L + H
Sbjct: 61 LVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHV 120
Query: 166 FGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKF 225
+ + +G+D ++ N + YAKC ++ A VF +EE ++VVSW S++ G
Sbjct: 121 YMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEE--KSVVSWTSLIVGLAVNGFG 178
Query: 226 DDSLNFYRHMMYNGFRLDVTTVVSLL 251
++L ++ + G T V +L
Sbjct: 179 KEALELFKELERKGLMPSEITFVGVL 204
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I ++ L LFR+M +EP+ T + ACA+L L + H ++V
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 123
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC + A+K+FDEM + V SW +++VG A GF + L
Sbjct: 124 KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALE 183
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIH 153
LF + G+ +T +G+ A H
Sbjct: 184 LFKELERKGLMPSEITFVGVLYACSH 209
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 188/630 (29%), Positives = 311/630 (49%), Gaps = 20/630 (3%)
Query: 22 WNSQI---REAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
WNS I + + +H + LFR+M+ DI PN T I KA + L + H
Sbjct: 85 WNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHA 144
Query: 79 HIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR-------LFYN 131
+VK +D + M + + M+ + + ++VLR F
Sbjct: 145 LVVKMSSFGDIYVDTS---LVGMYCKAGLKYLYMVYYGFWLCYKKDVLRRQLKSSICFLE 201
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
+ +D+V L+ A ++ L + +H + G+ V++ N ++ Y+KC+
Sbjct: 202 EKEKESDSDYVFTAVLSSLAATV-YVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCES 260
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
L A +F +R ++W++MV G + + +++ + M G + T+V +L
Sbjct: 261 LNEACKMFDSSGDR--NSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVL 318
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRV 311
++ LV+G+ +HS + GF+ + L+ MY+K G + AR FD + +R
Sbjct: 319 NACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVA 378
Query: 312 SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYA 371
WT++ISGY Q D +EAL L+ M+ AG +P+ T+ S++ C LELGK +
Sbjct: 379 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 438
Query: 372 CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
G V + +AL MY+KCGS+ D +F P K VVSW MI+G + NG+ EAL
Sbjct: 439 IKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 498
Query: 432 DLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
+LF +++ P+ VTF+ ++ AC+H GF+E+GW+ + D G+ +P++DHY+CM
Sbjct: 499 ELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGL--DPKVDHYACMV 556
Query: 492 DLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAA 551
D+L R G+LKE +F++S I +W LL ACK H N E+G Y L L ++
Sbjct: 557 DVLSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESS 616
Query: 552 PYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESEL 611
YV++A Y GR V + +M+ N V K G S + + F D H E
Sbjct: 617 TYVQLAGIYTALGRMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIEE 676
Query: 612 TYPVLDCLALHSREEAYSSHLK--WIPEHE 639
T ++ ++ EE + + L ++ E E
Sbjct: 677 TKDLVSLVSRQMLEEGFVTVLNSSYVEEEE 706
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 203/401 (50%), Gaps = 34/401 (8%)
Query: 77 HGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN---VLRLFYNMR 133
H +++ + + KC +L A+ IF+ + +DV SWN+++ G++Q G + + V++LF MR
Sbjct: 53 HANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMR 112
Query: 134 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLK 193
I + T+ G+ +A + ++ + H+ + + D+ V + + Y K LK
Sbjct: 113 AQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKA-GLK 171
Query: 194 MAELVFCG---------IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+V+ G + +L++ + C +K +S + Y
Sbjct: 172 YLYMVYYGFWLCYKKDVLRRQLKSSI--------CFLEEKEKESDSDY------------ 211
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
++LSS + GR +H + G V++ N L++MYSKC ++ A +FD
Sbjct: 212 -VFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 270
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
DR ++W+AM++GY+Q G+ EA++LF M +AG P T++ +++ C L G
Sbjct: 271 SGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEG 330
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K ++ G + ++ AL+DMY+K G + DAR+ F L E+ V WT++I+G N
Sbjct: 331 KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQN 390
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ EAL L+ ++ + PN T +VL+AC+ LE G
Sbjct: 391 SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 431
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 168/381 (44%), Gaps = 32/381 (8%)
Query: 153 HAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
H++H +L+ ++VH+ I G N ++ YAKC L A +F I + VV
Sbjct: 26 HSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAI--ICKDVV 83
Query: 211 SWNSMVAGCTYGDKFDDS---LNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
SWNS++ G + S + +R M + T+ + + ++ GR H
Sbjct: 84 SWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAH 143
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG--ICDRTRVSWTAMISGYAQKGD 325
+ + D+ V +L+ MY K G + +++ G +C + V + S
Sbjct: 144 ALVVKMSSFGDIYVDTSLVGMYCKAG-LKYLYMVYYGFWLCYKKDVLRRQLKSS------ 196
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+ F E E +++S + + LG+ GL V + NA
Sbjct: 197 ------ICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNA 250
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+ MYSKC S+ +A ++F + ++ ++W+ M+ G + NGE +EA+ LF ++ ++P+
Sbjct: 251 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPS 310
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA-- 503
T + VL AC+ +L +G + + + L + + D+ + G L +A
Sbjct: 311 EYTIVGVLNACSDICYLVEGKQLHSFLLK---LGFERHLFATTALVDMYAKAGCLADARK 367
Query: 504 -LDFVQSMPIKSDAGIWGTLL 523
D +Q + D +W +L+
Sbjct: 368 GFDCLQ----ERDVALWTSLI 384
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
Y F +N + H +T++ L+ LV GR VH+ I G
Sbjct: 2 YPSTFQTEINPFSH---------TSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQ 52
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA---LRLFFAME 337
N L++ Y+KCG + A +F+ I + VSW ++I+GY+Q G + + ++LF M
Sbjct: 53 HANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMR 112
Query: 338 AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
A LP+ T+ + + +G+ ++ V +L+ MY K G
Sbjct: 113 AQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 169
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 293/560 (52%), Gaps = 23/560 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ I E + +LL++ M Q +P+ +TF + L +++H
Sbjct: 227 IIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHS 286
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
HIV+S + KC+ L+ +F++M R+V SWN M+ +A+ G
Sbjct: 287 HIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRK 346
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+++ M+L G++ D VT +GL + L L + VH + +AD+ + N+ ++
Sbjct: 347 AVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLN 406
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y +C +++ AE+VF GI +R V+SW +M+ + ++ D +L + + +G +
Sbjct: 407 MYGRCGEVEQAEMVFDGILQR--NVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTC 464
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T + L + V EAL +GRLVHS + G D+DVS+ + L++MY +CG I A+ FD
Sbjct: 465 ITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDD 524
Query: 305 I-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ V+W+AMI+ + Q G E L+ M+ G T S +S C L
Sbjct: 525 TEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLRE 584
Query: 364 GKWFDNYACSGGL-KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
GK +Y + V N+L+ MY KCGS+ ARE+F + + W +I+G A
Sbjct: 585 GKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYA 644
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-GISYN 481
+ + +A++LFH++ + + P+ VTF+ +L C+H G L++G + Y +
Sbjct: 645 QHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEG----VYAYASMVELGLE 700
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P D+Y+C+ DLLGR GKL+EA +F+QS+ + +LL +CK H +++ G A
Sbjct: 701 PTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEG 760
Query: 542 LFKLEPHSAAPYVEMANKYA 561
+ +++P S++ +V +++ Y+
Sbjct: 761 IMEMDPRSSSAHVVLSSIYS 780
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 247/490 (50%), Gaps = 33/490 (6%)
Query: 39 LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIF 98
++L RQM ++P+N+T L+ + ++G C +D A ++F
Sbjct: 81 IILLRQMLLEGVKPDNIT-------------LLAALTMYG--------SCGSVDDAKRVF 119
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLS 158
D M R+V +W AM +G + LE ++F M L G +++FVT + L QA + L
Sbjct: 120 DAMPARNVITWTAM-IGAHAVTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLE 178
Query: 159 LLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
+ +H + + +CN I+ Y +C L+ A +F + ER +++WN+++
Sbjct: 179 VGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVER--DIIAWNALITE 236
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
++++ Y+ M+ G + D T V+LL+ PEAL + +LVHSH + G ++
Sbjct: 237 YGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSIN 296
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+++ L++MYSKC ++ R LF+ + R +SW M++ YA+ G +A+++ M+
Sbjct: 297 IALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQL 356
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G PD VT + +++ C S L+LG+ + G + ++++ N+L++MY +CG +
Sbjct: 357 DGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQ 416
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F + ++ V+SWT M+ + AL LFH + ++P +TFL L AC
Sbjct: 417 AEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVG 476
Query: 459 TGFLEKGWAI---SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
L+KG + ++ +D +S S + + GR G +++A ++ +
Sbjct: 477 AEALDKGRLVHSCAVQSGNDIDVSLG------SALVAMYGRCGSIRDAKACFDDTEVRKN 530
Query: 516 AGIWGTLLCA 525
W ++ A
Sbjct: 531 HVTWSAMIAA 540
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 228/484 (47%), Gaps = 68/484 (14%)
Query: 62 KACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVA 107
+AC K+ L ++ +H IV++ + KC LD A++ F+ M+ ++V
Sbjct: 3 QACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVY 62
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFG 167
+W A++ AQ + L M L G++ D +T++
Sbjct: 63 TWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAA-------------------- 102
Query: 168 IHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDD 227
++ Y C + A+ VF + R V++W +M+ G +
Sbjct: 103 ---------------LTMYGSCGSVDDAKRVFDAMPA--RNVITWTAMI-GAHAVTSLEQ 144
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLIS 287
+ +R M GF+ + T V+L+ + PE L G ++H + ++ + N LI+
Sbjct: 145 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 204
Query: 288 MYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
MY +CG ++ AR +F + +R ++W A+I+ Y Q G ++EA+ L+ M G PD VT
Sbjct: 205 MYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVT 264
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+++++ AL K ++ G+ N+ + AL+ MYSKC S+ D R LF +P
Sbjct: 265 FVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMP 324
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLE--- 463
++ V+SW M+ A +G +A+ + + M+LD ++P+ VT + +L CT + L+
Sbjct: 325 QRNVISWNVMVTAYAKHGLGRKAVQIT-EYMQLDGVKPDNVTCVGLLNVCTGSADLKLGR 383
Query: 464 --KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGT 521
GW I+ + + I +N L+ Y GR G++++A + V ++ + W
Sbjct: 384 KVHGW-IAEGRCEADLILWNSLLNMY-------GRCGEVEQA-EMVFDGILQRNVISWTA 434
Query: 522 LLCA 525
+L A
Sbjct: 435 MLTA 438
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 44/281 (15%)
Query: 256 CPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
CP+ AL R +HS + D V + N LI Y KC +D A F+ + + +W
Sbjct: 5 CPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVYTW 64
Query: 314 TAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACS 373
TA+I AQ A+ L M G PD +T+L
Sbjct: 65 TAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLL------------------------ 100
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
A + MY CGS+ DA+ +F A+P + V++WT MI A+ +A +
Sbjct: 101 -----------AALTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTS-LEQAFKV 148
Query: 434 FHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
F +LMEL+ + N VT++ ++QAC+ FLE G + + + P + +
Sbjct: 149 F-RLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCN---ALIT 204
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE 533
+ GR G+L++A SM ++ D W L+ H ++E
Sbjct: 205 MYGRCGRLEDARAIFSSM-VERDIIAWNALITEYGQHGHVE 244
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%)
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++ C + AL++ + + L + V + N LI Y KC S+ DA E F + K
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
V +WT +I CA + A+ L Q++ ++P+ +T LA L
Sbjct: 61 VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAAL 103
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 239/452 (52%), Gaps = 44/452 (9%)
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGF--------RLDVTTVVSLLSSFVCPEALVQG 263
+N+M+ + + ++ Y+ M+ + + VV + +C + G
Sbjct: 80 YNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDL---G 136
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA------------------------- 298
+ VH H +G + V N+L+ MY KC +D A
Sbjct: 137 KQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRL 196
Query: 299 ------RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
R +F+ + D+T SWTA++SGYA+ G +AL F M+ G PD ++++S++
Sbjct: 197 GQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVL 256
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
C Q GALELGKW YA G N+ VCNALI+MY+KCGSI + R LF + E+ V+
Sbjct: 257 PACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVI 316
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
SW+TMI G A +G EA++LF ++ + + PN +TF+ +L AC H G L +G + +
Sbjct: 317 SWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEG--LRYFE 374
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
+ + P ++HY C+ +LLG G+L +AL+ ++ MP+K D+ IWG+LL +C+ H N+
Sbjct: 375 SMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNL 434
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
EI L +LEP YV ++N YA G+WDGV+ +R +M+ +KK PG S +
Sbjct: 435 EIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEV 494
Query: 593 NGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
+ F + D S+ Y VL L +H R
Sbjct: 495 DNMVQEFASGDDSKPFSKAIYRVLKLLVMHQR 526
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 194/449 (43%), Gaps = 53/449 (11%)
Query: 43 RQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-----SPFVKCDRLD-CAYK 96
R+++ I F I K C + +L + IH HIVK S F+ +D C +
Sbjct: 3 RKLRALKIREMEDIFVPILKNCPNIVEL---KKIHAHIVKFSLSQSSFLVTKMVDVCNHH 59
Query: 97 IFDEMA---VRDVASWNAMLVGFAQMGFLEN---VLRLFYNMRLVG-------IQADFVT 143
E A + VA NA L + N VL + +++G I D T
Sbjct: 60 AETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFT 119
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ ++ L K VH G ++ V N+ + Y KCD L A VF +
Sbjct: 120 FPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMT 179
Query: 204 ERL-----------------------------RTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
ER +T+ SW ++V+G + D+L F+R
Sbjct: 180 ERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRR 239
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M G D ++VS+L + AL G+ +H + GF ++ V N LI MY+KCG
Sbjct: 240 MQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGS 299
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
ID R LFD + +R +SW+ MI G A G EA+ LF M+ A P+++T + ++S
Sbjct: 300 IDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSA 359
Query: 355 CGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS 413
C +G L G ++F++ ++ V L+++ G + A EL +P K +
Sbjct: 360 CAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSA 419
Query: 414 -WTTMIAGCALNGEFVEALDLFHQLMELD 441
W ++++ C + A+ L+EL+
Sbjct: 420 IWGSLLSSCRSHSNLEIAVIAMEHLLELE 448
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 162/373 (43%), Gaps = 57/373 (15%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-----KQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+N+ IR + + +++QM +N I P+ TFPF+ K+CA L + +
Sbjct: 80 YNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQV 139
Query: 77 HGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWN------------ 110
HGH+ K +VKCD LD A+K+F+EM RD SWN
Sbjct: 140 HGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQM 199
Query: 111 -------------------AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAA 151
A++ G+A++G + L F M++VGI+ D ++++ + A
Sbjct: 200 RRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPAC 259
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
L L K +H + G ++ VCN I YAKC + +F + E R V+S
Sbjct: 260 AQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNE--RDVIS 317
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLVHSHG 270
W++M+ G + +++ ++ M ++ T V LLS+ L +G R S
Sbjct: 318 WSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMK 377
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAMISGYAQKGDLDEA 329
Y + V L+++ G +D A L + + + W +++S +L+ A
Sbjct: 378 RDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIA 437
Query: 330 LRLFFAMEAAGEL 342
+ AME EL
Sbjct: 438 V---IAMEHLLEL 447
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 276/534 (51%), Gaps = 43/534 (8%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKH 156
FD++ +DV +WN+M+ + G + FY + LV I+ DF T + +A
Sbjct: 74 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GT 130
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + +H + +G +V V + I Y++ +A +F + R + SWN+M+
Sbjct: 131 LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP--FRDMGSWNAMI 188
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G +L+ M G +++ TVVS+L FV
Sbjct: 189 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFV--------------------- 227
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
MY+K G +DSA +F+ I + +SW +I+GYAQ G EA+ ++ M
Sbjct: 228 ----------DMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMM 277
Query: 337 EAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
E E+ P+ T +S++ GAL+ G L +V V LID+Y KCG
Sbjct: 278 EECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGR 337
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ DA LFY +P++ V+W +I+ ++G + L LF ++++ ++P+ VTF+++L A
Sbjct: 338 LVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSA 397
Query: 456 CTHTGFLEKG-WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
C+H+GF+E+G W ++Q + GI P L HY CM DLLGR G L+ A DF++ MP++
Sbjct: 398 CSHSGFVEEGKWCFRLMQ--EYGI--KPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQP 453
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
DA IWG LL AC+IH NIE+G++ + LF+++ + YV ++N YA G+W+GV +R+
Sbjct: 454 DASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRS 513
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ + +KK PG S +N K F ++ H + + Y L L + Y
Sbjct: 514 LARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGY 567
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 191/437 (43%), Gaps = 53/437 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS I V+ H+ + F Q+ ++I P+ TFP + KAC L D + IH
Sbjct: 85 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWA 141
Query: 81 VK-----SPFVKCDRL---------DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + FV + A +FD+M RD+ SWNAM+ G Q G L
Sbjct: 142 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 201
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ MRL GI+ +FVTV VS+ ++ Y
Sbjct: 202 DVLDEMRLEGIKMNFVTV-------------------------------VSILPVFVDMY 230
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMY-NGFRLDVT 245
AK L A VF I ++ V+SWN+++ G +++ Y+ M +
Sbjct: 231 AKLGLLDSAHKVFEIIP--VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 288
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
T VS+L ++ AL QG +H I LDV V LI +Y KCG + A LF +
Sbjct: 289 TWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 348
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ V+W A+IS + G ++ L+LF M G PD VT +S++S C SG +E GK
Sbjct: 349 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 408
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGCALN 424
W G+K ++ ++D+ + G + A + +P + S W ++ C ++
Sbjct: 409 WCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH 468
Query: 425 GEFVEALDLFHQLMELD 441
G +L E+D
Sbjct: 469 GNIELGKFASDRLFEVD 485
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-P 343
L+++Y+ GD+ +R FD I + +W +MIS Y G EA+ F+ + E+ P
Sbjct: 57 LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 116
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T ++ CG L G+ +A G + NV V +LI MYS+ G G AR LF
Sbjct: 117 DFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 173
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACT----HT 459
+P + + SW MI+G NG +ALD+ ++ ++ N VT +++L
Sbjct: 174 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKL 233
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM----PIKSD 515
G L+ + I IS+N + Y+ + G EA++ + M I +
Sbjct: 234 GLLDSAHKVFEIIPVKDVISWNTLITGYA-------QNGLASEAIEVYKMMEECKEIIPN 286
Query: 516 AGIWGTLLCA----------CKIH-----LNIEIGEYVAYCL 542
G W ++L A KIH N+ + +VA CL
Sbjct: 287 QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCL 328
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 374 GGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDL 433
G ++ + L+++Y+ G + +R F +P+K V +W +MI+ NG F EA+
Sbjct: 45 AGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGC 104
Query: 434 FHQLMEL-DLRPNRVTFLAVLQACTHTGFLEKG-----WAISIIQYDDKGISYNPELDHY 487
F+QL+ + ++RP+ TF VL+AC G L G WA + G +N +
Sbjct: 105 FYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKL------GFQWNVFVA-- 153
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + + R G A MP + D G W ++
Sbjct: 154 ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMI 188
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 296/615 (48%), Gaps = 21/615 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ + V + + +F+ M + ++ + TF I AC LS + +H
Sbjct: 401 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 460
Query: 79 HIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K S FV LD A +F + +D SWNA+ VG AQ E
Sbjct: 461 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 520
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ + MRL GI D V+ A + + K +H I G+ ++ +V ++ I
Sbjct: 521 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLID 580
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y+K D++ + +F ++ ++V N+++AG + D+++ ++ ++ +G +
Sbjct: 581 LYSKHGDVESSRKIFAQVDAS--SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSS 638
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFD 303
T S+LS G+ VH + + G D +++ +L +Y K ++ A L
Sbjct: 639 VTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLT 698
Query: 304 GICDRTRV-SWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
+ D + WTA+ISGYAQ G D +L F+ M D T S++ C A
Sbjct: 699 EMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFA 758
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGC 421
GK G +ALIDMYSKCG + + E F L K ++ W +MI G
Sbjct: 759 DGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGF 818
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
A NG EAL LF ++ EL ++P+ VTFL VL ACTH+G + +G G++
Sbjct: 819 AKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLT-- 876
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P LDHY+C DLLGR G L+EA + + +P + D +W T L AC++H + E G+ A
Sbjct: 877 PRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARK 936
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +LEP ++ YV +++ +A G W R M+ V KFPG S + KT F
Sbjct: 937 LVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLV 996
Query: 602 EDRYHAESELTYPVL 616
+D+YH ++ Y +L
Sbjct: 997 QDKYHPDNLRIYEML 1011
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 215/444 (48%), Gaps = 6/444 (1%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
+ S RLD A + +M +WNA++ G AQ G NVL L+ +MR G+
Sbjct: 275 IISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPT 334
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T + AA + K + +H+ + G+DA+V V ++ I+ YAKC A+ VF
Sbjct: 335 RSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD 394
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
E+ +V WN+M+ G + ++++ +++MM + D T VS+L + +
Sbjct: 395 LSCEK--NIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSF 452
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGY 320
G+ VH I D+ + V N + MYSK G I A+ LF I + +SW A+ G
Sbjct: 453 YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGL 512
Query: 321 AQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV 380
AQ + +EA+ + M G PD V+ + I+ C A E GK A G+ N
Sbjct: 513 AQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH 572
Query: 381 MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL 440
V ++LID+YSK G + +R++F + +V +IAG N EA+ LF Q+++
Sbjct: 573 AVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD 632
Query: 441 DLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-GISYNPELDHYSCMADLLGRKGK 499
L+P+ VTF ++L C +G L + Y K G+ Y+ L S +A + +
Sbjct: 633 GLKPSSVTFSSILSGC--SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVS-LAGIYLKSKM 689
Query: 500 LKEALDFVQSMPIKSDAGIWGTLL 523
L++A + MP + W ++
Sbjct: 690 LEDANKLLTEMPDHKNLFEWTAII 713
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 213/469 (45%), Gaps = 58/469 (12%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYK 96
P+ + AC+++ L Y + +H +VKS F KC + A +
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD +A D W++M+ + ++G + L LF M +G D VT++
Sbjct: 225 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLV----------- 273
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
T IS+ A L A + + + V+WN+++
Sbjct: 274 ------------------------TIISTLASSGRLDHATALLKKMPTP--STVAWNAVI 307
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G + L Y+ M G +T S+LS+ +A V+G+ +H+ + +G D
Sbjct: 308 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 367
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+V V ++LI++Y+KCG A+ +FD C++ V W AM++G+ Q +EA+R+F M
Sbjct: 368 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 427
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
D T +S++ C + LGK + ++ V NA +DMYSK G+I
Sbjct: 428 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 487
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
GDA+ LF +P K +SW + G A N E EA+ + ++ + P+ V+F + AC
Sbjct: 488 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 547
Query: 457 THTGFLEKGWAIS--IIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
++ E G I I+Y GI N + S + DL + G ++ +
Sbjct: 548 SNIRATETGKQIHCLAIKY---GICSNHAVG--SSLIDLYSKHGDVESS 591
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 37/239 (15%)
Query: 227 DSLNFYRHMMYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTL 285
D L +R++ G R D + +LS+ L GR VH + GF V L
Sbjct: 150 DVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAAL 209
Query: 286 ISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+ MY+KCGD+ +AR +FDGI + W++MI+ Y + G EAL LF M+ G PD
Sbjct: 210 VDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQ 269
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
VT++++IS SG L+ A L
Sbjct: 270 VTLVTIISTLASSGRLD-----------------------------------HATALLKK 294
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH-TGFLE 463
+P V+W +I+G A +G L L+ + L P R TF ++L A + F+E
Sbjct: 295 MPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVE 353
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
R +H + G L + ++L+ +Y K G + A +R + ++++S +A+
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 324 GDLDEALRLFFAME-AAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G + L F + AG PD + ++S C + G L G+ G +V
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+DMY+KCG + +AR +F + + W++MIA G + EAL LF ++ ++
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 265
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAI 468
P++VT + ++ +G L+ A+
Sbjct: 266 APDQVTLVTIISTLASSGRLDHATAL 291
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 17/265 (6%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
+S+I N+ I V N + + LF+Q+ ++ ++P+++TF I C+ + +
Sbjct: 600 ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQ 659
Query: 76 IHGHIVKSP---------------FVKCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQM 119
+H + +KS ++K L+ A K+ EM +++ W A++ G+AQ
Sbjct: 660 VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQN 719
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G+ ++ L F+ MR +++D T + +A + K +H G + +
Sbjct: 720 GYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETAT 779
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
+ I Y+KC D+ + F ++ + + ++ WNSM+ G D++L ++ M
Sbjct: 780 SALIDMYSKCGDVISSFEAFKELKNK-QDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 838
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGR 264
+ D T + +L + + +GR
Sbjct: 839 IKPDEVTFLGVLIACTHSGLISEGR 863
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 294/566 (51%), Gaps = 22/566 (3%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
Y+ + ++V S +V ++ A +FD V WNA+ G+ F V+ LF
Sbjct: 55 YNGYVAPNVVTS-WVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGK 113
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M+ + ++ + T + ++ + +H I G++ + V T I Y+
Sbjct: 114 MKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRA 173
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+ A +F G+ ER +V+W SM++G ++ + R + DV ++
Sbjct: 174 IGSAYKLFVGMLER--NIVAWTSMISGYILCNR----VALARRLFDLAPERDVVLWNIMV 227
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLISMYSKCGDIDSARVLFDGICD 307
S ++ + R + FD D NT+++ Y+ GD+++ LF+ + +
Sbjct: 228 SGYIEIGDMKAARKL--------FDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPE 279
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELGKW 366
R SW +I GYA G E LR F M G +P+ T+++++S C + GAL+LGKW
Sbjct: 280 RNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKW 339
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
YA + G K ++ V NALIDMYSKCG I +A E+F ++ K +++W +MI G A +G
Sbjct: 340 VHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGC 399
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+AL LFHQ+ +P+ +TF+ VL +CTH G +E+G + ++ I+ P+++H
Sbjct: 400 GADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIA--PQIEH 457
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y CM DL GR G L A++FV+ MP+++DA IW LL AC+I+ NI++ E L LE
Sbjct: 458 YGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLE 517
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + A YV ++N Y GRW VA ++ +M+ KK PG SL +N F + D H
Sbjct: 518 PKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERH 577
Query: 607 AESELTYPVLDCLALHSREEAYSSHL 632
++S+ Y VL L R Y ++
Sbjct: 578 SQSKEIYGVLKGLMKLLRSFGYGPNM 603
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 197/427 (46%), Gaps = 27/427 (6%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ + WN+ R + + + LF +MK D+ PN TFP + K+CAK+ +
Sbjct: 83 FPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEG 142
Query: 74 QMIHGHIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH ++K + FV +D AYK+F M R++ +W +M+ G+
Sbjct: 143 EEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILC 202
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ RLF + + D V + I + + + + D
Sbjct: 203 NRVALARRLFD----LAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPY----RDTMSW 254
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT ++ YA D++ E +F + E R V SWN ++ G + F + L ++ M+ +G
Sbjct: 255 NTMLNGYANNGDVEACEQLFEEMPE--RNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 312
Query: 240 FRL-DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ + T+V++LS+ AL G+ VH + GF + V N LI MYSKCG I++A
Sbjct: 313 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 372
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F+ + + ++W +MI G A G +AL LF M+ GE PD +T + ++ C
Sbjct: 373 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 432
Query: 359 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTT 416
G +E G +F++ + + ++D++ + G + A E +P E V W
Sbjct: 433 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 492
Query: 417 MIAGCAL 423
++ C +
Sbjct: 493 LLGACRI 499
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 172/377 (45%), Gaps = 17/377 (4%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K ++LL+ V + I G + V ++S+ + A +F + V WN+
Sbjct: 36 KTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDP--KVELWNA 93
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+ G + + + + + M R + T +L S A V+G +H I G
Sbjct: 94 ISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGG 153
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ + V TLI +YS I SA LF G+ +R V+WT+MISGY + A RLF
Sbjct: 154 LEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLF- 212
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ A E D+V M+SG + G ++ K FD + M N +++ Y+
Sbjct: 213 --DLAPE-RDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR-----DTMSWNTMLNGYANN 264
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ-LMELDLRPNRVTFLAV 452
G + +LF +PE+ V SW +I G A NG F E L F + L++ + PN T + V
Sbjct: 265 GDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTV 324
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
L AC G L+ G + + I + + + + D+ + G ++ A++ +SM +
Sbjct: 325 LSACARLGALDLGKWVHVYA---ATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDL 381
Query: 513 KSDAGIWGTLLCACKIH 529
K D W +++C H
Sbjct: 382 K-DLITWNSMICGLATH 397
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 294/566 (51%), Gaps = 22/566 (3%)
Query: 72 YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYN 131
Y+ + ++V S +V ++ A +FD V WNA+ G+ F V+ LF
Sbjct: 97 YNGYVAPNVVTS-WVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGK 155
Query: 132 MRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
M+ + ++ + T + ++ + +H I G++ + V T I Y+
Sbjct: 156 MKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRA 215
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+ A +F G+ ER +V+W SM++G ++ + R + DV ++
Sbjct: 216 IGSAYKLFVGMLER--NIVAWTSMISGYILCNR----VALARRLFDLAPERDVVLWNIMV 269
Query: 252 SSFVCPEALVQGRLVHSHGIHYGFDL----DVSVINTLISMYSKCGDIDSARVLFDGICD 307
S ++ + R + FD D NT+++ Y+ GD+++ LF+ + +
Sbjct: 270 SGYIEIGDMKAARKL--------FDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPE 321
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG-ELPDLVTVLSMISGCGQSGALELGKW 366
R SW +I GYA G E LR F M G +P+ T+++++S C + GAL+LGKW
Sbjct: 322 RNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKW 381
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
YA + G K ++ V NALIDMYSKCG I +A E+F ++ K +++W +MI G A +G
Sbjct: 382 VHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGC 441
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+AL LFHQ+ +P+ +TF+ VL +CTH G +E+G + ++ I+ P+++H
Sbjct: 442 GADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIA--PQIEH 499
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y CM DL GR G L A++FV+ MP+++DA IW LL AC+I+ NI++ E L LE
Sbjct: 500 YGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLE 559
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYH 606
P + A YV ++N Y GRW VA ++ +M+ KK PG SL +N F + D H
Sbjct: 560 PKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERH 619
Query: 607 AESELTYPVLDCLALHSREEAYSSHL 632
++S+ Y VL L R Y ++
Sbjct: 620 SQSKEIYGVLKGLMKLLRSFGYEPNM 645
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 197/427 (46%), Gaps = 27/427 (6%)
Query: 14 YRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYS 73
+ + WN+ R + + + LF +MK D+ PN TFP + K+CAK+ +
Sbjct: 125 FPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEG 184
Query: 74 QMIHGHIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQM 119
+ IH ++K + FV +D AYK+F M R++ +W +M+ G+
Sbjct: 185 EEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILC 244
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
+ RLF + + D V + I + + + + D
Sbjct: 245 NRVALARRLFD----LAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPY----RDTMSW 296
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT ++ YA D++ E +F + E R V SWN ++ G + F + L ++ M+ +G
Sbjct: 297 NTMLNGYANNGDVEACEQLFEEMPE--RNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 354
Query: 240 FRL-DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
+ + T+V++LS+ AL G+ VH + GF + V N LI MYSKCG I++A
Sbjct: 355 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 414
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F+ + + ++W +MI G A G +AL LF M+ GE PD +T + ++ C
Sbjct: 415 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 474
Query: 359 GALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTT 416
G +E G +F++ + + ++D++ + G + A E +P E V W
Sbjct: 475 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 534
Query: 417 MIAGCAL 423
++ C +
Sbjct: 535 LLGACRI 541
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 172/377 (45%), Gaps = 17/377 (4%)
Query: 155 KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNS 214
K ++LL+ V + I G + V ++S+ + A +F + V WN+
Sbjct: 78 KTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDP--KVELWNA 135
Query: 215 MVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG 274
+ G + + + + + M R + T +L S A V+G +H I G
Sbjct: 136 ISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGG 195
Query: 275 FDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
+ + V TLI +YS I SA LF G+ +R V+WT+MISGY + A RLF
Sbjct: 196 LEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLF- 254
Query: 335 AMEAAGELPDLVTVLSMISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ A E D+V M+SG + G ++ K FD + M N +++ Y+
Sbjct: 255 --DLAPE-RDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR-----DTMSWNTMLNGYANN 306
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ-LMELDLRPNRVTFLAV 452
G + +LF +PE+ V SW +I G A NG F E L F + L++ + PN T + V
Sbjct: 307 GDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTV 366
Query: 453 LQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPI 512
L AC G L+ G + + I + + + + D+ + G ++ A++ +SM +
Sbjct: 367 LSACARLGALDLGKWVHVYA---ATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDL 423
Query: 513 KSDAGIWGTLLCACKIH 529
K D W +++C H
Sbjct: 424 K-DLITWNSMICGLATH 439
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 270/521 (51%), Gaps = 9/521 (1%)
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF 129
L +S H H++ +VKC RL ++FDEM R+V SW+A++ GF Q G L LF
Sbjct: 246 LPFSLFFHNHVLNF-YVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLF 304
Query: 130 YNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
M G I + T++ A + L +++F + +G ++V + N ++++ +
Sbjct: 305 GRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIR 364
Query: 189 CDDLKMAELVFCGIEERL-RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ L A VF E L + VSWN+M+AG F+ F+R M + D T
Sbjct: 365 HEKLLEALEVF---ESCLSKDTVSWNAMMAGYLQLAYFELP-KFWRRMNLESVKPDNFTF 420
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L+ G VH + G+ D+ V N+L MY K + FD +
Sbjct: 421 ASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSS 480
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
SWT M +G Q G+ +AL + + M+ G + T+ + ++ C ++E GK F
Sbjct: 481 SDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKF 540
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G +V V NAL+DMY+KCG + A +F ++ E+ VVSWTTMI G A NG+
Sbjct: 541 HGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQT 600
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
EAL +F ++ + + PN +TF+ VL AC+ GF+++ W D GI+ P DHY
Sbjct: 601 KEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIA--PSEDHY 658
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
CM +LLGR G +KEA D + MP + + +W TLL AC +H +IE G+ A L+
Sbjct: 659 VCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDR 718
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+ + Y+ ++N +A G WD V +R +M+ VKK PG S
Sbjct: 719 NDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKKVPGSS 759
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 24/424 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMK-QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
W++ I V ++ L LF +M I PN T AC+ LI S I+ I
Sbjct: 284 WSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFI 343
Query: 81 VK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
V+ + ++ ++L A ++F+ +D SWNAM+ G+ Q+ + E +
Sbjct: 344 VRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFE-LP 402
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
+ + M L ++ D T + L VH + G D+ V N+ Y
Sbjct: 403 KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMY 462
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
K + K+ + E V SW M AGC + +L M G RL+ T
Sbjct: 463 VK--NQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFT 520
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ + L+S ++ +G+ H I G D+DV V N L+ MY+KCG + SA V+F +
Sbjct: 521 LATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMD 580
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGK 365
+R+ VSWT MI G+A G EAL++F M P+ +T + +++ C Q G + E K
Sbjct: 581 ERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWK 640
Query: 366 WFDNYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCA 422
+F + + G+ ++ VC ++++ + G I +A +L +P + + W T++ C
Sbjct: 641 YFSSMSADHGIAPSEDHYVC--MVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACL 698
Query: 423 LNGE 426
++G+
Sbjct: 699 VHGD 702
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 29/230 (12%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
SS + W + E K L + +MK + N T +CA L+ + +
Sbjct: 480 SSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKK 539
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
HG +K + KC + A +F M R V SW M++GFA G
Sbjct: 540 FHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQ 599
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA-------KHLSLLKSVHSFGIHIGVDA 174
+ L++F MR + + +T + + A K+ S + + H I
Sbjct: 600 TKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG----IAPSE 655
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC-TYGD 223
D VC + A C +K AE + + + ++V W +++ C +GD
Sbjct: 656 DHYVCMVNLLGRAGC--IKEAEDLILQMPFQPGSLV-WQTLLGACLVHGD 702
>gi|413917687|gb|AFW57619.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 611
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 273/566 (48%), Gaps = 33/566 (5%)
Query: 64 CAKLSDLIYSQMIHGHIVKSP--FVKCDRLDC-----------------------AYKIF 98
C + DL +H + K+P F C R C A ++F
Sbjct: 21 CGRAGDLRLGTSLHAIVAKNPSHFRLCPRRSCLQHVVVVWNSLVAMYGRCGCRGDAVRVF 80
Query: 99 DEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA---K 155
DEMA+RD SWN++L A +LR + D T+ + A A
Sbjct: 81 DEMALRDSVSWNSLLSASASATDALALLRRMLSAAPGAAACDHATLTTVLSACARAGGGT 140
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSM 215
+ L +VH G+DA+VSV N I++Y +C AE VF G+ +R V++W +M
Sbjct: 141 GSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFDGMADR--NVITWTAM 198
Query: 216 VAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGF 275
V+G +++ +SL+ +R M + + S L + A +G+ +H + G
Sbjct: 199 VSGMARAERYSESLSLFRQM-RRAVDANRASYSSSLLACAGSRAAREGQQIHGLAVKAGL 257
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
+ D+ V + L+ MYSKCG ++ A +F D VS T +++G+AQ G +EA RLF
Sbjct: 258 ETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQNGLEEEAFRLFAE 317
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
M G D V +++ G S LGK A N VCN LI+MYSKCG
Sbjct: 318 MVGKGIRVDANMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTYVCNGLINMYSKCGE 377
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ ++ +F P K V+W ++IA A +G E LF + ++P VTFL++L
Sbjct: 378 LQESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLFESMEADGVKPTDVTFLSLLHG 437
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
C+H G KG I GI +P+++HY+C+ D+LGR +L +A F++ P K
Sbjct: 438 CSHVGSPRKGLEILDSMPSKYGI--HPKVEHYACVVDMLGRASQLDDAKAFIEDGPFKDS 495
Query: 516 AGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTM 575
A +W +L+ AC H N +GE A L L+P A YV ++N Y+ GRWD A I
Sbjct: 496 ALLWQSLMGACSFHKNSGVGECAAEKLLLLDPDCTAAYVLLSNVYSSEGRWDDRARIMKR 555
Query: 576 MKRNQVKKFPGQSLFHINGKTCTFTA 601
M+ ++K G+S + + +F A
Sbjct: 556 MRARGLRKDTGKSWIELEKEVRSFAA 581
>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 312/577 (54%), Gaps = 28/577 (4%)
Query: 76 IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF--LENVLRLFYNMR 133
I G + S +KC LDC ++F A+ + S LV A+ G LE +L +F M
Sbjct: 193 IFGFQLHSRILKCG-LDC--EVFVGNALITMYSRCCRLVE-ARRGNSGLEAIL-VFLEML 247
Query: 134 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLK 193
G++ D V+ G A H K L + +HS + IG D V VCN IS+Y+KC+D++
Sbjct: 248 KEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIE 307
Query: 194 MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSS 253
A+LVF I +R VVSW +M++ +D+ + + M +G + T V L+ +
Sbjct: 308 DAKLVFESIIDR--NVVSWTTMISISE-----EDATSLFNEMRRDGVYPNDVTFVGLIHA 360
Query: 254 FVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
+ +G+++H + F +++V N+LI+MY+K + + +F+ + R +SW
Sbjct: 361 ITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISW 420
Query: 314 TAMISGYAQKGDLDEALRLFFA--MEAAGELPDLVTVLSMISGCGQSGALEL--GKWFDN 369
++ISGYAQ G EAL+ F + ME+ P+ T S++S + A+ + G+ +
Sbjct: 421 NSLISGYAQNGLWQEALQTFLSALMESR---PNEFTFGSVLSSIASAEAISMRHGQRCHS 477
Query: 370 YACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
+ GL N +V +AL+DMY+K GSI ++ +F P K V+WT +I+ A +G++
Sbjct: 478 HILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEA 537
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC 489
++LF + ++P+ +TFLAV+ AC G ++ G+ + D I +PE HYS
Sbjct: 538 VMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPE--HYSS 595
Query: 490 MADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHS 549
M D+LGR G+LKEA +FV +P + + +LL AC+IH N+++ + VA L ++EP
Sbjct: 596 MVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMG 655
Query: 550 AAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT-----FTAEDR 604
+ YV M+N YA G W+ VA IR M+ V+K G S + + F+++D+
Sbjct: 656 SGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDK 715
Query: 605 YHAESELTYPVLDCLALHSREEAYSSHLKWIPEHEAG 641
+H +SE Y + + L L + K +P++ +G
Sbjct: 716 FHPQSEEIYRMAETLGLEMKFLEKERKRKIMPDNHSG 752
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 153/564 (27%), Positives = 250/564 (44%), Gaps = 80/564 (14%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPN--NLTFPFIAKACAKLSDLIYSQ 74
+TI N + A+ +N + + L LF++ Q N +T + KAC S L
Sbjct: 41 TTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKL--GC 98
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH + S F+ K D A +F+ + D+ SWN +L GF +
Sbjct: 99 QIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS- 157
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSV 178
++ L M G+ D VT T A + H + +HS + G+D +V V
Sbjct: 158 --DDALNFALRMNFTGVAFDAVTCT--TVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
N I+ Y++C C + E R G+ +++ + M+
Sbjct: 214 GNALITMYSRC----------CRLVEARR--------------GNSGLEAILVFLEMLKE 249
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G +LD + +S+ + GR +HS + G+D V V N LIS YSKC DI+ A
Sbjct: 250 GMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDA 309
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+++F+ I DR VSWT MIS + +A LF M G P+ VT + +I
Sbjct: 310 KLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRRDGVYPNDVTFVGLIHAITMK 364
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMI 418
+E G+ + V N+LI MY+K S+ D+ ++F L + ++SW ++I
Sbjct: 365 NLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLI 424
Query: 419 AGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-- 476
+G A NG + EAL F + ++ RPN TF +VL + + AIS +++ +
Sbjct: 425 SGYAQNGLWQEALQTFLSAL-MESRPNEFTFGSVLSS------IASAEAIS-MRHGQRCH 476
Query: 477 ------GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
G++ NP + S + D+ ++G + E+L P+K++ W ++ A H
Sbjct: 477 SHILKLGLNTNPIVS--SALLDMYAKRGSICESLGVFSETPLKNEVA-WTAIISAHARH- 532
Query: 531 NIEIGEYVAYC-LFK-LEPHSAAP 552
G+Y A LFK +E P
Sbjct: 533 ----GDYEAVMNLFKDMEREGVKP 552
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/500 (33%), Positives = 264/500 (52%), Gaps = 30/500 (6%)
Query: 134 LVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLK 193
V I D ++ L + H SL +S SF + VD VCN + + +
Sbjct: 62 FVPILKDCPNIVELKKIHAHIVKFSLSQS--SFLVTKMVD----VCNHY-------GETE 108
Query: 194 MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF--------RLDVT 245
A L+F G+ + +N+M+ + + ++ Y+ M+ N +
Sbjct: 109 YANLLFKGVADP--NAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFP 166
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
VV + +C + G+ VH H +G + V N+L+ MY KC +D A +F+ +
Sbjct: 167 FVVKSCAGLMCYDL---GKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEM 223
Query: 306 CDR--TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+R T SWTA++SGYA+ G +AL F M+ G PD ++++S++ C Q GALEL
Sbjct: 224 TERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALEL 283
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GKW YA G N+ VCNALI+MY+KCGSI R LF + E+ V+SW+TMI G A
Sbjct: 284 GKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLAN 343
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G EA++LF ++ + + P+ +TF+ +L AC H G L +G + + + + P
Sbjct: 344 HGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEG--LRYFESMKRDYNIEPG 401
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HY C+ +LLG G+L +AL+ V+ MP K D+ IWG+LL +C+ H N++I L
Sbjct: 402 VEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLL 461
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
+LEP YV ++N YA G+WDGV+ +R +M+ +KK PG S ++ F + D
Sbjct: 462 ELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGD 521
Query: 604 RYHAESELTYPVLDCLALHS 623
S+ VL L +H
Sbjct: 522 DSKPFSKAICRVLKLLVMHQ 541
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 28/344 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-----KQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
+N+ IR + + +++QM +N I P+ TFPF+ K+CA L + +
Sbjct: 125 YNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQV 184
Query: 77 HGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRD--VASWNAMLVGFAQMG 120
HGH+ K +VKCD LD A+++F+EM RD + SW A++ G+A++G
Sbjct: 185 HGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIG 244
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+ L F M++VGI+ D ++++ + L L K +H + G ++ VCN
Sbjct: 245 CYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCN 304
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
I YAKC + +F ++E R V+SW++M+ G + +++ ++ M
Sbjct: 305 ALIEMYAKCGSIDQGRRLFDQMKE--RDVISWSTMIVGLANHGRAREAIELFQEMQKAKI 362
Query: 241 RLDVTTVVSLLSSFVCPEALVQG-RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+ T V LL++ L +G R S Y + V L+++ G +D A
Sbjct: 363 EPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQAL 422
Query: 300 VLFDGICDRTRVS-WTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
L + + W +++S G+L A+ AME EL
Sbjct: 423 ELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAV---IAMEHLLEL 463
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 300/629 (47%), Gaps = 28/629 (4%)
Query: 22 WNSQIREAVNKNEAHKTLL--LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH 79
WN I K + + LF++M+ + PN TF + A + + H
Sbjct: 79 WNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHAL 138
Query: 80 IVKSP-----FVKCD------RLDC---AYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+K+ FV ++ C A K+FD + R+ SW ++ G+A
Sbjct: 139 AIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEA 198
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
LF MR D + A + K +H + G+ + SV N ++
Sbjct: 199 WELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTM 258
Query: 186 YAKC----DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
Y KC D LK EL + ++W++M+ G ++LN + +M NG +
Sbjct: 259 YGKCGCLDDALKTFEL------SGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 312
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T V ++++ AL +G+ +H + + G++ + + L+ MY+KCG + AR
Sbjct: 313 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKG 372
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + V WT+MISGYAQ G+ + AL L+ M+ +P +T+ S++ C AL
Sbjct: 373 FDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAAL 432
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E GK G V + +AL MY+KCGS+ D +F +P + +++W MI+G
Sbjct: 433 EQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGL 492
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+ NGE ++AL+LF +L +P+ VTF+ VL AC+H G +E+G + D+ GI
Sbjct: 493 SQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV-- 550
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P ++HY+CM D+L R GKL E +F++S I +W LL AC+ + N E+G Y
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L +L ++ Y+ +++ Y GR D V +R +MK V K PG S + + F
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 670
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSS 630
D+ H + L L H ++E Y S
Sbjct: 671 GDQIHPQIVKICSELRRLRDHMKDECYES 699
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 236/492 (47%), Gaps = 26/492 (5%)
Query: 50 IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLDCAY 95
+ P + +F + C + DL + IH ++++ + KC + A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 96 KIFDEMAVRDVASWNAMLVGFAQMGFL--ENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+F+ + +DV SWN ++ G++Q G + V+ LF MR + T G+ AA
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ H+ I DV V ++ I+ Y K + A VF I E R VSW
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPE--RNTVSWA 183
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++++G ++ + M D S+LS+ P+ + G+ +H +
Sbjct: 184 TIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN 243
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G SV N L++MY KCG +D A F+ D+ ++W+AMI+GYAQ GD EAL LF
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF 303
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ M G P T + +I+ C GALE GK Y+ G + + AL+DMY+KC
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKC 363
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
GS+ DAR+ F L E +V WT+MI+G A NGE AL L+ ++ + P+ +T +VL
Sbjct: 364 GSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVL 423
Query: 454 QACTHTGFLEKGWAI--SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP 511
+AC+ LE+G I I+Y ++ E+ S ++ + + G L++ + MP
Sbjct: 424 RACSSLAALEQGKQIHAQTIKY-----GFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 478
Query: 512 IKSDAGIWGTLL 523
+ D W ++
Sbjct: 479 SR-DIMTWNAMI 489
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/640 (28%), Positives = 303/640 (47%), Gaps = 29/640 (4%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
RI + WN+ + + ++ K + F M I+PN ++F I AC+
Sbjct: 393 FRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEA 452
Query: 70 LIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAV--RDVASWNAM 112
L + + IH I+ S + KC + A +F EM + R + +WN M
Sbjct: 453 LDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVM 512
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
L +AQ + M G+ D ++ + + ++ +L+ + I
Sbjct: 513 LGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLR------MCILE 566
Query: 173 DADVSVC--NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
S C IS + +C +L+ A VF ++ VVSW +MV+ F + +
Sbjct: 567 SGYRSACLETALISMHGRCRELEQARSVFDEMDHG--DVVSWTAMVSATAENRDFKEVHH 624
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+R M G D T+ + L + + L G+++H+ G + D++V N L++MYS
Sbjct: 625 LFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYS 684
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
CGD A F+ + R VSW M + YAQ G EA+ LF M+ G PD +T +
Sbjct: 685 NCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFST 744
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
++ G S + GK F A GL +V V L+ +Y+KCG + +A LF +
Sbjct: 745 TLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWT 804
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISI 470
VV +I A +G EA+ +F ++ + +RP+ T ++++ AC H G +E+G + +
Sbjct: 805 VVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFL 864
Query: 471 IQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHL 530
+ GIS P L+HY+C DLLGR G+L+ A ++ MP + + +W +LL CK+
Sbjct: 865 TMKEYFGIS--PTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922
Query: 531 NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLF 590
+ E+GE A + +L+PH++A +V ++N Y G+W R + VK PG S
Sbjct: 923 DAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWL 982
Query: 591 HINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
I + F A DR H +++ Y VLD L L R Y +
Sbjct: 983 EIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEA 1022
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 228/504 (45%), Gaps = 24/504 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS-DLIYSQMIHGHI 80
WN+ I +V + +FR+++ + PN++T I A A D ++ HG I
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRI 361
Query: 81 --------------VKSPFVKCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQMGFLENV 125
+ S + KC A+ +F + + DV SWN ML V
Sbjct: 362 WESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKV 421
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWIS 184
+ F++M L GI + V+ + + A +++ L + +HS + D + SV +S
Sbjct: 422 VNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVS 481
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y KC + AELVF + R++V+WN M+ D+ ++ M+ G D
Sbjct: 482 MYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ S+LSS C + + +++ + G+ + LISM+ +C +++ AR +FD
Sbjct: 542 LSFTSVLSSCYCSQ---EAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFDE 597
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ VSWTAM+S A+ D E LF M+ G +PD T+ + + C S L LG
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLG 657
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
K GL+ ++ V NAL++MYS CG +A F + + +VSW M A A
Sbjct: 658 KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQA 717
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G EA+ LF + ++P+++TF L + + G + + + ++
Sbjct: 718 GLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAES---GLDSDV 774
Query: 485 DHYSCMADLLGRKGKLKEALDFVQ 508
+ + L + GKL EA+ +
Sbjct: 775 SVATGLVKLYAKCGKLDEAISLFR 798
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 31/503 (6%)
Query: 38 TLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKI 97
T LL + ND+ IA A + + G+ + + +V+C L+ A+ I
Sbjct: 29 TALLQSCVDSNDLAKGKRAHELIANAG------LEQHLFLGNCLINMYVRCGSLEEAHAI 82
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA-DFVTVMGLTQAAIHAKH 156
F +M R+V SW A++ AQ G LF M L A + T++ + A +++
Sbjct: 83 FSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142
Query: 157 LSLLKSVHSFGIHIGVDADVS----VCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
L++ +S+H+ +G++ + + V N I+ YAKC + A VF I E + VVSW
Sbjct: 143 LAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPE--KDVVSW 200
Query: 213 NSMVAGCTYGDKF-DDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
+M +F D+L +R M+ +V T ++ L + +L G +HS
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLH 257
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR---VSWTAMISGYAQKGDLDE 328
G D N LI+MY KCGD + A +F + R VSW AMIS + G +
Sbjct: 258 EAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGD 317
Query: 329 ALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG---KWFDNYACSGGLKDNVMVCNA 385
A+ +F + G P+ VT++++++ SG ++ G K+ SG L+D V+V NA
Sbjct: 318 AMAIFRRLRLEGMRPNSVTLITILNALAASG-VDFGAARKFHGRIWESGYLRD-VVVGNA 375
Query: 386 LIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+I MY+KCG A +F + K V+SW TM+ F + ++ FH ++ + P
Sbjct: 376 IISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDP 435
Query: 445 NRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
N+V+F+A+L AC+++ L+ G I S+I + E + + + G+ G + EA
Sbjct: 436 NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY---VESSVATMLVSMYGKCGSIAEA 492
Query: 504 LDFVQSMPIKSDAGI-WGTLLCA 525
+ MP+ S + + W +L A
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGA 515
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 161/331 (48%), Gaps = 14/331 (4%)
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
AD L Q+ + + L+ K H + G++ + + N I+ Y +C L+ A +
Sbjct: 23 ADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCP 257
F +EE R VVSW ++++ F + +R M+ + T+V++L++
Sbjct: 83 FSKMEE--RNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANS 140
Query: 258 EALVQGRLVHSHGIHYGFDLDVS----VINTLISMYSKCGDIDSARVLFDGICDRTRVSW 313
L GR +H+ G + + + V N +I+MY+KCG + A +F I ++ VSW
Sbjct: 141 RDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSW 200
Query: 314 TAMISGYAQKGDL-DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYAC 372
TAM YAQ+ +ALR+F M P+++T ++ + C +L G W +
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLH 257
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI---VVSWTTMIAGCALNGEFVE 429
GL + + NALI+MY KCG A +F A+ + +VSW MI+ G +
Sbjct: 258 EAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGD 317
Query: 430 ALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
A+ +F +L +RPN VT + +L A +G
Sbjct: 318 AMAIFRRLRLEGMRPNSVTLITILNALAASG 348
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 14/291 (4%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D+ +LL S V L +G+ H + G + + + N LI+MY +CG ++ A +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGAL 361
+ +R VSWTA+IS AQ G A LF M + P+ T+++M++ C S L
Sbjct: 84 SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 362 ELGKWFDNYACSGGLKDN----VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
+G+ GL+ +V NA+I+MY+KCGS DA +F +PEK VVSWT M
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAM 203
Query: 418 IAGCALNGEFV-EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK 476
A F +AL +F +++ L PN +TF+ L AC T + W S++ +
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--TSLRDGTWLHSLLH--EA 259
Query: 477 GISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGI--WGTLLCA 525
G+ ++P + + ++ G+ G + A ++M + + + W ++ A
Sbjct: 260 GLGFDPLAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA 308
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 295/561 (52%), Gaps = 28/561 (4%)
Query: 80 IVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQA 139
++KS F K + A+ +FDEM RDV +W +M+ G+ +F NM G++
Sbjct: 47 LIKSYFDK-GSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKP 105
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISSYAKC-DDLKMAEL 197
+ TV + +A K L K VH I IG + + V N + YA C D + A L
Sbjct: 106 NAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARL 165
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM-MYNG------FRLDVTTVVSL 250
VF I + VSW +++ G T+ L +R M M G F + V+ S+
Sbjct: 166 VFEDIGTK--NAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASI 223
Query: 251 LSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTR 310
SS + G+ VH+ I++GF+ ++ V+N ++ MY +C A+ LF + +
Sbjct: 224 GSSNL-------GKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDT 276
Query: 311 VSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNY 370
++W +I+G+ + D E+L +F M + G P+ T S+I+ C L G+
Sbjct: 277 ITWNTLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGG 335
Query: 371 ACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEA 430
GL +N+ + NALIDMY+KCG++ D+ ++F + +VSWT+M+ G +G EA
Sbjct: 336 IIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEA 395
Query: 431 LDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY---NPELDHY 487
+DLF++++ ++P+++ F+AVL AC+H G +++G ++Y SY P+ D Y
Sbjct: 396 VDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEG-----LRYFRLMTSYYNVAPDRDIY 450
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
+C+ DLL R G++KEA + +++MP K D IW LL ACK + I + A + +++P
Sbjct: 451 ACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKP 510
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
+ A YV ++N A G W A++R +M+ + KK G+S + + C+F D + +
Sbjct: 511 NKAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDS 570
Query: 608 ESELTYPVLDCLALHSREEAY 628
++ VL+ L H ++ Y
Sbjct: 571 SNKEVCEVLELLIRHMKDAGY 591
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 223/466 (47%), Gaps = 30/466 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W S I + N + +F M ++ ++PN T + KAC L L+ +++HG +
Sbjct: 75 WTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAI 134
Query: 82 K------SPFVK----------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
K S +V CD +D A +F+++ ++ SW ++ G+
Sbjct: 135 KIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGG 194
Query: 126 LRLFYNMRL-VGIQADFVTVMGLTQ-AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LR+F M + G + F + ++ A+I + +L K VH+ I+ G ++++ V N +
Sbjct: 195 LRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLG--KQVHAAVINHGFESNLPVMNAIL 252
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
Y +C A+ +F + + + ++WN+++AG D + +SL + M+ GF +
Sbjct: 253 DMYCRCRCASEAKQLFGEMTQ--KDTITWNTLIAGFETLDSY-ESLCIFSQMVSEGFSPN 309
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T S++++ L G+ +H IH G D ++ + N LI MY+KCG++ + +F
Sbjct: 310 CFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFS 369
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
G+ VSWT+M+ GY G EA+ LF M +G PD + ++++S C +G ++
Sbjct: 370 GMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDE 429
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVS-WTTMIAGC 421
G ++F + + + ++D+ S+ G + +A EL +P K S W ++ C
Sbjct: 430 GLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGAC 489
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ ++ L L+++PN+ +L ++ E WA
Sbjct: 490 KKYKQ--PSIQKLAALKVLEMKPNKAGTYVLL---SNFSAAEGNWA 530
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
KD + LI Y GS +A LF +P + V++WT+MI G A ++F
Sbjct: 38 KDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTN 97
Query: 437 LMELDLRPNRVTFLAVLQACTH-----TGFLEKGWAISIIQYDDKGISYNPELDHYSCMA 491
++ ++PN T AVL+AC G L G AI I N +D Y+
Sbjct: 98 MLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCC 157
Query: 492 D 492
D
Sbjct: 158 D 158
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 276/548 (50%), Gaps = 45/548 (8%)
Query: 89 DRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT 148
+ +D A IF +++ +NA++ G A+ E+ + F M I D +T +
Sbjct: 88 NSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVL 147
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR- 207
++A + + +++H + G++ D V + + Y K ++L A VF E ++
Sbjct: 148 KSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKN 207
Query: 208 -TVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+V+ WN ++ G C GD + L S P+
Sbjct: 208 GSVLIWNVLIHGYCRMGD--------------------LVKATELFDSM--PKK------ 239
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
D N+LI+ + K GD+ A+ LF + ++ VSWT M++G++Q GD
Sbjct: 240 ------------DTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGD 287
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
++AL FF M G P+ T++S +S C + GAL+ G NY G K N+++ A
Sbjct: 288 PEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTA 347
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY+KCG+I A ++F+ EK ++ W+ MI G A++G F +AL F + +P+
Sbjct: 348 LVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPD 407
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
V FLAVL AC+H+G + +G + +G P + HY+ + D+LGR G+L EAL
Sbjct: 408 SVVFLAVLNACSHSGQVNEG--LKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALK 465
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+++MPI D +WG L CAC+ H N+E+ E + L +LEP YV ++N YA GR
Sbjct: 466 FIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGR 525
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
WD +R M+ + K PG S ++ K F A D H + Y LD ++ +RE
Sbjct: 526 WDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASARE 585
Query: 626 EAYSSHLK 633
+ Y+ ++
Sbjct: 586 KGYTKEIE 593
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 201/451 (44%), Gaps = 62/451 (13%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+N+ IR + ++ F M + I P+ LTFPF+ K+ A LS+ + +H I+
Sbjct: 108 FNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGIL 167
Query: 82 K--------------SPFVKCDRLDCAYKIFDEM--AVRD--VASWNAMLVGFAQMGFLE 123
K +VK + L A K+FDE +V++ V WN ++ G+ +MG L
Sbjct: 168 KFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLV 227
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
LF +M D N+ I
Sbjct: 228 KATELFDSM---------------------------------------PKKDTGSWNSLI 248
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ + K D+ A+ +F + E + VVSW +MV G + + +L + M+ G R +
Sbjct: 249 NGFMKMGDMGRAKELFVKMPE--KNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPN 306
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+VS LS+ AL G +H++ GF L++ + L+ MY+KCG+I+ A +F
Sbjct: 307 DYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFH 366
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
++ + W+ MI G+A G +AL+ F M+ G PD V L++++ C SG +
Sbjct: 367 ETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNE 426
Query: 364 G-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
G K+FDN ++ ++ ++DM + G + +A + A+P V W + C
Sbjct: 427 GLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCAC 486
Query: 422 ALNGEFVEALDLFHQLMELDLR-PNRVTFLA 451
+ A +L++L+ + P FL+
Sbjct: 487 RTHKNVEMAELASKKLLQLEPKHPGSYVFLS 517
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 306/607 (50%), Gaps = 35/607 (5%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVK---------CDRL 91
L R +++N + + T P K I++Q+I H+ + P++ + L
Sbjct: 18 LRRHLEENITDLHKCTNPNHIKQ-------IHAQLIKCHLHQDPYIAPKLIASYSLTNNL 70
Query: 92 DCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLF---YNMRLVGIQADFVTVMGLT 148
A +F+++ +V +N ++ ++ G N L F M + G+ AD T L
Sbjct: 71 SSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLL 130
Query: 149 QAAIHAKH-LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+ + LSL+K VH+ +G D+ V N+ I Y +C D++MA VF G+EE R
Sbjct: 131 KGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEE--R 188
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG-RLV 266
VVSWNSMV G D +L + M D + ++L F + + +L
Sbjct: 189 DVVSWNSMVGGLVKNGDLDGALKVFDEMP----ERDRVSWNTMLDGFTKAGEMDKAFKLF 244
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
+ D+ +T++ YSK GD+D AR+LFD + V WT +ISGYA+KG +
Sbjct: 245 ERMA-----ERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQV 299
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
EA+ L ME +G D +S+++ C +SG L LGK + + + V N+
Sbjct: 300 KEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSF 359
Query: 387 IDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
IDMY+KCG + DA +F + EK +VSW +MI G ++G ++++LF+ ++ +P+
Sbjct: 360 IDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPD 419
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
R TF+ +L ACTH G + +G GI P+++HY CM DLLGR G LKEA
Sbjct: 420 RYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIV--PQIEHYGCMVDLLGRGGHLKEAFW 477
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
V+SMP + +A I GTLL AC++H ++++ V+ LFKL P + ++N YA G
Sbjct: 478 LVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGD 537
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
W VA +R M +K G S + + FT D H +S Y ++D L R+
Sbjct: 538 WINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDIYNMIDRLVHDLRQ 597
Query: 626 EAYSSHL 632
Y L
Sbjct: 598 VGYVPRL 604
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQND-IEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WNS + V + L +F +M + D + N + F + ++ +M I
Sbjct: 193 WNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDI 252
Query: 81 VKSPFVKCD-----RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV 135
V + C +D A +FD V+++ W ++ G+A+ G ++ + L M
Sbjct: 253 VSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKS 312
Query: 136 GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA 195
G++ D + + A + L L K +H + V N++I YAKC + A
Sbjct: 313 GLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDA 372
Query: 196 ELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFV 255
VF G++ + +VSWNSM+ G + S+ + M+ GF+ D T + LL +
Sbjct: 373 FRVFNGMKTE-KDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACT 431
Query: 256 CPEALVQGR 264
+ +GR
Sbjct: 432 HAGLVNEGR 440
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,768,220,563
Number of Sequences: 23463169
Number of extensions: 388095177
Number of successful extensions: 1232594
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8129
Number of HSP's successfully gapped in prelim test: 2805
Number of HSP's that attempted gapping in prelim test: 1050452
Number of HSP's gapped (non-prelim): 60543
length of query: 641
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 492
effective length of database: 8,863,183,186
effective search space: 4360686127512
effective search space used: 4360686127512
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)