BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048321
(641 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/634 (55%), Positives = 441/634 (69%), Gaps = 19/634 (2%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
RL RI S++N WN QIREAVN+N+ ++LLLFR+MK+ EPNN TFPF+AKACA+L+
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 69 DLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
D+ +M+H H++KSPF VKC+ +D A K+F+ M RD +WNAML
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GF Q G + LF MRL I D VTVM L Q+A K L LL+++H+ GI +GVD
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV-AGCTYGDKFDDSLNFYR 233
V+V NTWIS+Y KC DL A+LVF I+ RTVVSWNSM A +G+ FD + Y
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD-AFGLYC 245
Query: 234 HMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M+ F+ D++T ++L +S PE L QGRL+HSH IH G D D+ INT ISMYSK
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 294 DIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMIS 353
D SAR+LFD + RT VSWT MISGYA+KGD+DEAL LF AM +GE PDLVT+LS+IS
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 354 GCGQSGALELGKWFDNYA-CSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
GCG+ G+LE GKW D A G +DNVM+CNALIDMYSKCGSI +AR++F PEK VV
Sbjct: 366 GCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ 472
+WTTMIAG ALNG F+EAL LF ++++LD +PN +TFLAVLQAC H+G LEKGW I
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 473 YDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNI 532
IS P LDHYSCM DLLGRKGKL+EAL+ +++M K DAGIWG LL ACKIH N+
Sbjct: 486 KQVYNIS--PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNV 543
Query: 533 EIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHI 592
+I E A LF LEP AAPYVEMAN YA G WDG A IR++MK+ +KK+PG+S+ +
Sbjct: 544 KIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 603
Query: 593 NGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
NGK +FT + H E+E+ Y L+ L+L ++++
Sbjct: 604 NGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 320/606 (52%), Gaps = 18/606 (2%)
Query: 37 KTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPF----------- 85
K L F +M+ +D+EP F ++ K C ++L + IHG +VKS F
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 86 ---VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
KC +++ A K+FD M RD+ SWN ++ G++Q G L + +M ++ F+
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T++ + A + +S+ K +H + + G D+ V++ + YAKC L+ A +F G+
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
ER VVSWNSM+ + +++ ++ M+ G + +V+ L + L +
Sbjct: 298 LER--NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H + G D +VSV+N+LISMY KC ++D+A +F + RT VSW AMI G+AQ
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +AL F M + PD T +S+I+ + KW L NV V
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 475
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+DMY+KCG+I AR +F + E+ V +W MI G +G AL+LF ++ + +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+PN VTFL+V+ AC+H+G +E G + ++ I + +DHY M DLLGR G+L E
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS--MDHYGAMVDLLGRAGRLNE 593
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A DF+ MP+K ++G +L AC+IH N+ E A LF+L P +V +AN Y
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRA 653
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
W+ V +R M R ++K PG S+ I + +F + H +S+ Y L+ L H
Sbjct: 654 ASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICH 713
Query: 623 SREEAY 628
+E Y
Sbjct: 714 IKEAGY 719
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 216/453 (47%), Gaps = 20/453 (4%)
Query: 16 SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFP--FIAKACAKLSDL--- 70
SS + Q+ S + + N H+ L ++N I N P + + C+ L +L
Sbjct: 2 SSQLVQF-STVPQIPNPPSRHRHFL----SERNYIPANVYEHPAALLLERCSSLKELRQI 56
Query: 71 --------IYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
+Y + + S F + +D A ++F+ + + ++ ML GFA++ L
Sbjct: 57 LPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDL 116
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L+ F MR ++ L + L + K +H + G D+
Sbjct: 117 DKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGL 176
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAKC + A VF + E R +VSWN++VAG + +L + M +
Sbjct: 177 ENMYAKCRQVNEARKVFDRMPE--RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
T+VS+L + + G+ +H + + GFD V++ L+ MY+KCG +++AR LF
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
DG+ +R VSW +MI Y Q + EA+ +F M G P V+V+ + C G LE
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G++ + GL NV V N+LI MY KC + A +F L + +VSW MI G A
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
NG ++AL+ F Q+ ++P+ T+++V+ A
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 121/241 (50%), Gaps = 4/241 (1%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPD 344
L+S++ + G +D A +F+ I + V + M+ G+A+ DLD+AL+ F M P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 345 LVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFY 404
+ ++ CG L +GK G ++ L +MY+KC + +AR++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 405 ALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEK 464
+PE+ +VSW T++AG + NG AL++ + E +L+P+ +T ++VL A + +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 465 GWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLC 524
G I Y + ++ ++ + + D+ + G L+ A M ++ + W +++
Sbjct: 255 GKEIH--GYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMID 310
Query: 525 A 525
A
Sbjct: 311 A 311
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S T+ WN+ I L F QM+ ++P+ T+ + A A+LS +++
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 75 MIHGHIVKS--------------PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IHG +++S + KC + A IFD M+ R V +WNAM+ G+ G
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
F + L LF M+ I+ + VT + + A H+
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 338/629 (53%), Gaps = 21/629 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN + E + ++ LF++M + +E ++ TF ++K+ + L + + +HG I+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F +K R+D A K+FDEM RDV SWN+++ G+ G E L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M + GI+ D T++ + ++ +SL ++VHS G+ + CNT + Y+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC DL A+ VF + +R +VVS+ SM+AG +++ + M G DV TV
Sbjct: 343 KCGDLDSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++L+ L +G+ VH D+ V N L+ MY+KCG + A ++F +
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+ +SW +I GY++ +EAL LF +E PD TV ++ C A + G+
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y G + V N+L+DMY+KCG++ A LF + K +VSWT MIAG ++G
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-SIIQYDDKGISYNPELD 485
EA+ LF+Q+ + + + ++F+++L AC+H+G +++GW +I++++ K P ++
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK---IEPTVE 637
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ D+L R G L +A F+++MPI DA IWG LLC C+IH ++++ E VA +F+L
Sbjct: 638 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
EP + YV MAN YA +W+ V +R + + ++K PG S I G+ F A D
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 757
Query: 606 HAESELTYPVLDCLALHSREEAYSSHLKW 634
+ E+E L + EE YS K+
Sbjct: 758 NPETENIEAFLRKVRARMIEEGYSPLTKY 786
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 229/466 (49%), Gaps = 19/466 (4%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ N+Q+R + L + DI+P T + + CA L + +
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVD 117
Query: 78 GHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
I + FV C L A ++FDE+ + WN ++ A+ G
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ LF M G++ D T ++++ + + + +H F + G SV N+ +
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV 237
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+ Y K + A VF + ER V+SWNS++ G + L+ + M+ +G +D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTER--DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+ T+VS+ + + GR VHS G+ F + NTL+ MYSKCGD+DSA+ +F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ DR+ VS+T+MI+GYA++G EA++LF ME G PD+ TV ++++ C + L+
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK + L ++ V NAL+DMY+KCGS+ +A +F + K ++SW T+I G +
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 424 NGEFVEALDLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAI 468
N EAL LF+ L+E P+ T VL AC +KG I
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+D T+ S+L ++L G+ V + GF +D ++ + L MY+ CGD+ A +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + W +++ A+ GD ++ LF M ++G D T + ++
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G+ + G + V N+L+ Y K + AR++F + E+ V+SW ++I G
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQ----YDDKG 477
NG + L +F Q++ + + T ++V C + + G A+ I + +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALD 505
N LD YS DL K +E D
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSD 359
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 329/627 (52%), Gaps = 22/627 (3%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ QWN+ ++ + + + L F M +++ +P+N T P KAC +L ++ Y +MIH
Sbjct: 24 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 83
Query: 78 GHIVKSP---------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
G + K ++KC R+ A ++FDE+ D+ +W++M+ GF + G
Sbjct: 84 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP 143
Query: 123 ENVLRLFYNMRLVG-IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ F M + + D VT++ L A + L + VH F I G D+S+ N+
Sbjct: 144 YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 203
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ YAK K A +F I E+ V+SW++++A ++L + MM +G
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAEK--DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
+V TV+ +L + L QGR H I G + +V V L+ MY KC + A +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGA 360
F I + VSW A+ISG+ G ++ F M PD + ++ ++ C + G
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LE K F +Y G N + +L+++YS+CGS+G+A ++F + K V WT++I G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 421 CALNGEFVEALDLF-HQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
++G+ +AL+ F H + +++PN VTFL++L AC+H G + +G I + +D ++
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P L+HY+ + DLLGR G L A++ + MP I GTLL AC+IH N E+ E VA
Sbjct: 502 --PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 559
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF+LE + A Y+ M+N Y + G W+ V +R +K+ +KK +SL I K F
Sbjct: 560 KKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRF 619
Query: 600 TAEDRYHAESELTYPVLDCLALHSREE 626
A+D H E E Y +L L LH +E+
Sbjct: 620 VADDELHPEKEPVYGLLKELDLHMKED 646
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
R++ WN+++ + ++++ L + HM + + D T+ L + + G ++
Sbjct: 23 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 82
Query: 267 H---SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
H + G DL V ++LI MY KCG + A +FD + V+W++M+SG+ +
Sbjct: 83 HGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 140
Query: 324 GDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +A+ F M A ++ PD VT+++++S C + LG+ + G +++ +
Sbjct: 141 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 200
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+L++ Y+K + +A LF + EK V+SW+T+IA NG EAL +F+ +M+
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
PN T L VLQAC LE+G
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQG 283
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
AR +F + R+ W ++ +++ +E L F M E PD T+ + CG+
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 358 SGALELGKWFDNYACSG-GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTT 416
+ G+ + L ++ V ++LI MY KCG + +A +F L + +V+W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 417 MIAGCALNGEFVEALDLFHQL-MELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQY 473
M++G NG +A++ F ++ M D+ P+RVT + ++ ACT G + +I+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 474 DDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
++ +L + + + + KEA++ + M + D W T++ AC +
Sbjct: 193 -----GFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQ 241
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 68/180 (37%), Gaps = 33/180 (18%)
Query: 392 KCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
K S DAR++F + ++ + W T++ + ++ E L F + + +P+ T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 452 VLQACTHT----------GFLEKGWAISIIQYDDKGISY-------------------NP 482
L+AC GF++K + Y + Y P
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAG----IWGTLLCACKIHLNIEIGEYV 538
++ +S M + G +A++F + M + SD TL+ AC N +G V
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/517 (35%), Positives = 287/517 (55%), Gaps = 3/517 (0%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A ++FD++ + WNA++ G+++ ++ L ++ NM+L + D T L +A
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
HL + + VH+ +G DADV V N I+ YAKC L A VF G+ RT+VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
++V+ + ++L + M + D +VS+L++F C + L QGR +H+ +
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G +++ ++ +L +MY+KCG + +A++LFD + + W AMISGYA+ G EA+ +F
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M PD +++ S IS C Q G+LE + Y +D+V + +ALIDM++KC
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
GS+ AR +F ++ VV W+ MI G L+G EA+ L+ + + PN VTFL +L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H+G + +GW D K NP+ HY+C+ DLLGR G L +A + ++ MP++
Sbjct: 432 MACNHSGMVREGWWFFNRMADHK---INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+WG LL ACK H ++E+GEY A LF ++P + YV+++N YA WD VA +R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESE 610
MK + K G S + G+ F D+ H E
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 205/420 (48%), Gaps = 19/420 (4%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
I WN+ IR N LL++ M+ + P++ TFP + KAC+ LS L + +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 79 HIVKSPF--------------VKCDRLDCAYKIFDEMAV--RDVASWNAMLVGFAQMGFL 122
+ + F KC RL A +F+ + + R + SW A++ +AQ G
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
L +F MR + ++ D+V ++ + A + L +S+H+ + +G++ + + +
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ YAKC + A+++F ++ ++ WN+M++G ++++ + M+ R
Sbjct: 264 NTMYAKCGQVATAKILFDKMKS--PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
D ++ S +S+ +L Q R ++ + + DV + + LI M++KCG ++ AR++F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
D DR V W+AMI GY G EA+ L+ AME G P+ VT L ++ C SG +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGC 421
G WF N + +ID+ + G + A E+ +P + V W +++ C
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 121/227 (53%), Gaps = 7/227 (3%)
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
Q + +H+ + G +I LI S GDI AR +FD + W A+I GY+
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
+ +AL ++ M+ A PD T ++ C L++G++ G +V
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 382 VCNALIDMYSKCGSIGDARELF--YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V N LI +Y+KC +G AR +F LPE+ +VSWT +++ A NGE +EAL++F Q+ +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
+D++P+ V ++VL A T L++G +I S+++ G+ P+L
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM---GLEIEPDL 259
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 16/248 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
TI W + + E + L +F QM++ D++P+ + + A L DL + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+VK + + KC ++ A +FD+M ++ WNAM+ G+A+ G+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
+ +F+ M ++ D +++ A L +S++ + DV + + I
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
+AKC ++ A LVF + R VV W++M+ G + ++++ YR M G +
Sbjct: 366 DMFAKCGSVEGARLVFDRTLD--RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 244 VTTVVSLL 251
T + LL
Sbjct: 424 DVTFLGLL 431
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S + WN+ I A + + +F +M D+ P+ ++ ACA++ L ++
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++ ++ +S F KC ++ A +FD RDV W+AM+VG+ G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
+ L+ M G+ + VT +GL A H+
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/611 (33%), Positives = 306/611 (50%), Gaps = 24/611 (3%)
Query: 35 AHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------- 86
K + LF++M + +EP++ T + AC+ L Q +H + K F
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 87 ------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
KC ++ A F E V +V WN MLV + + L N R+F M++ I +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMA---EL 197
T + + I L L + +HS I + VC+ I YAK L A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 198 VFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCP 257
F G + VVSW +M+AG T + D +L +R M+ G R D + + +S+
Sbjct: 550 RFAG-----KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMI 317
+AL +G+ +H+ GF D+ N L+++YS+CG I+ + + F+ ++W A++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
SG+ Q G+ +EALR+F M G + T S + ++ ++ GK G
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
VCNALI MY+KCGSI DA + F + K VSW +I + +G EALD F Q+
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRK 497
+ ++RPN VT + VL AC+H G ++KG A + G+S PE HY C+ D+L R
Sbjct: 785 IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE--HYVCVVDMLTRA 842
Query: 498 GKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMA 557
G L A +F+Q MPIK DA +W TLL AC +H N+EIGE+ A+ L +LEP +A YV ++
Sbjct: 843 GLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 902
Query: 558 NKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
N YA+ +WD R MK VKK PGQS + +F D+ H ++ +
Sbjct: 903 NLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ 962
Query: 618 CLALHSREEAY 628
L + E Y
Sbjct: 963 DLTKRASEIGY 973
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 247/514 (48%), Gaps = 33/514 (6%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS---DLIYSQ 74
TI WN I+E ++N + LF +M ++ PN TF + +AC S D++ +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--E 207
Query: 75 MIHGHI----VKSPFVKCDRL----------DCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
IH I ++ V C+ L D A ++FD + ++D +SW AM+ G ++
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
+RLF +M ++GI + A + L + + +H + +G +D VCN
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG---CTYGDKFDDSLNFYRHMMY 237
+S Y +L AE +F + + R V++N+++ G C YG+K ++ ++ M
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQ--RDAVTYNTLINGLSQCGYGEK---AMELFKRMHL 382
Query: 238 NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDS 297
+G D T+ SL+ + L +G+ +H++ GF + + L+++Y+KC DI++
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A F V W M+ Y DL + R+F M+ +P+ T S++ C +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
G LELG+ + + N VC+ LIDMY+K G + A ++ K VVSWTTM
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKG 477
IAG +AL F Q+++ +R + V + AC L++G I +
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI----HAQAC 618
Query: 478 IS-YNPELDHYSCMADLLGRKGKLKEA-LDFVQS 509
+S ++ +L + + L R GK++E+ L F Q+
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 225/502 (44%), Gaps = 32/502 (6%)
Query: 45 MKQNDIEPNNLTFPFIAKACAKLS-DLIYSQMIHGHIVKSPFVKCDRLDC---------- 93
++ I PN+ T ++ + C K + L + +H I+K + D C
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK---LGLDSNGCLSEKLFDFYL 131
Query: 94 -------AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMG 146
A+K+FDEM R + +WN M+ A + V LF M + + T G
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 147 LTQAAIHAK-HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ +A +++ +H+ ++ G+ VCN I Y++ + +A VF G+ R
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--R 249
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
L+ SW +M++G + + +++ + M G S+LS+ E+L G
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H + GF D V N L+S+Y G++ SA +F + R V++ +I+G +Q G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
++A+ LF M G PD T+ S++ C G L G+ Y G N + A
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+++Y+KC I A + F + VV W M+ L + + +F Q+ ++ PN
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEA 503
+ T+ ++L+ C G LE G Q + I N +L+ Y C + D+ + GKL A
Sbjct: 490 QYTYPSILKTCIRLGDLELGE-----QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 504 LDFVQSMPIKSDAGIWGTLLCA 525
D + K D W T++
Sbjct: 545 WDILIRFAGK-DVVSWTTMIAG 565
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N K L FRQM I + + ACA L L Q IH
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S F +C +++ +Y F++ D +WNA++ GF Q G E LR
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F M GI + T +AA ++ K VH+ G D++ VCN IS YA
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC + AE F +E + VSWN+++ + ++L+ + M+++ R + T+
Sbjct: 739 KCGSISDAEKQF--LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 248 VSLLSS 253
V +LS+
Sbjct: 797 VGVLSA 802
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 218/678 (32%), Positives = 338/678 (49%), Gaps = 82/678 (12%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
PP +Y WNS IR + A+K L LF M P+N TFPF+ KAC
Sbjct: 85 FPPSDAGVY------HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACG 138
Query: 66 KLSDLIYSQMIH--------------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
++S + + H G+ + + + +C L A K+FDEM+V DV SWN+
Sbjct: 139 EISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNS 198
Query: 112 MLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ +A++G + L +F M G + D +T++ + SL K +H F +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
+ ++ V N + YAKC + A VF + ++ VVSWN+MVAG + +F+D++
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS--VKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 231 FY-----------------------------------RHMMYNGFRLDVTTVVSLLSSFV 255
+ R M+ +G + + T++S+LS
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 256 CPEALVQGRLVHSHGIHYGFDLDVS-------VINTLISMYSKCGDIDSARVLFDGICDR 308
AL+ G+ +H + I Y DL + VIN LI MY+KC +D+AR +FD + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 309 TR--VSWTAMISGYAQKGDLDEALRLFFAM--EAAGELPDLVTVLSMISGCGQSGALELG 364
R V+WT MI GY+Q GD ++AL L M E P+ T+ + C AL +G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 365 KWFDNYACSGGLKD-NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
K YA + V N LIDMY+KCGSI DAR +F + K V+WT+++ G +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK-----GI 478
+G EAL +F ++ + + + VT L VL AC+H+G +++G ++Y ++ G+
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG-----MEYFNRMKTVFGV 611
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV 538
S PE HY+C+ DLLGR G+L AL ++ MP++ +W L C+IH +E+GEY
Sbjct: 612 SPGPE--HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A + +L + Y ++N YA GRW V IR++M+ VKK PG S T T
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729
Query: 599 FTAEDRYHAESELTYPVL 616
F D+ H ++ Y VL
Sbjct: 730 FFVGDKTHPHAKEIYQVL 747
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 158/323 (48%), Gaps = 12/323 (3%)
Query: 147 LTQAAIHA-KHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+T IH K +S +K +H + G+ +++ + IS+Y L A +
Sbjct: 30 ITPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPS 88
Query: 206 LRTVVSWNSMVAGCTYGDK--FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQG 263
V WNS++ +YGD + L + M + D T + + ++ G
Sbjct: 89 DAGVYHWNSLIR--SYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCG 146
Query: 264 RLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
H+ + GF +V V N L++MYS+C + AR +FD + VSW ++I YA+
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 324 GDLDEALRLFFAMEAA-GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G AL +F M G PD +T+++++ C G LGK +A + + N+ V
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N L+DMY+KCG + +A +F + K VVSW M+AG + G F +A+ LF ++ E +
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 443 RPNRVTFLAVLQACTHTGFLEKG 465
+ + VT+ A + +G+ ++G
Sbjct: 327 KMDVVTWSAAI-----SGYAQRG 344
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 319/612 (52%), Gaps = 20/612 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVK 87
F M+ + I PN +TF + CA + +HG +V S + K
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 88 CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGL 147
C R D A K+F M+ D +WN M+ G+ Q G +E L FY M G+ D +T L
Sbjct: 287 CGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 148 TQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLR 207
+ ++L K +H + + + D+ + + I +Y KC + MA+ +F
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV-- 404
Query: 208 TVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVH 267
VV + +M++G + + DSL +R ++ + T+VS+L AL GR +H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 268 SHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
I GFD ++ +I MY+KCG ++ A +F+ + R VSW +MI+ AQ +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
A+ +F M +G D V++ + +S C + GK + L +V + LI
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-LRPNR 446
DMY+KCG++ A +F + EK +VSW ++IA C +G+ ++L LFH+++E +RP++
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 447 VTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDF 506
+TFL ++ +C H G +++G +D GI P+ +HY+C+ DL GR G+L EA +
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI--QPQQEHYACVVDLFGRAGRLTEAYET 702
Query: 507 VQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRW 566
V+SMP DAG+WGTLL AC++H N+E+ E + L L+P ++ YV ++N +A W
Sbjct: 703 VKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREW 762
Query: 567 DGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREE 626
+ V +R++MK +V+K PG S IN +T F + D H ES Y +L+ L R E
Sbjct: 763 ESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLE 822
Query: 627 AYSSHLKWIPEH 638
Y ++P H
Sbjct: 823 GYIPQ-PYLPLH 833
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/532 (28%), Positives = 258/532 (48%), Gaps = 26/532 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL------- 67
R S+I WNS I V ++ L + +M + P+ TFP + KAC L
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 68 --SDLIYS------QMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
SD + S + + ++K+ +++ ++D K+FD + +D WN ML G+A+
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKA-YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVC 179
G L++V++ F MR+ I + VT + + L +H + GVD + S+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ +S Y+KC A +F + R T V+WN M++G ++SL F+ M+ +G
Sbjct: 278 NSLLSMYSKCGRFDDASKLF-RMMSRADT-VTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
D T SLL S E L + +H + + + LD+ + + LI Y KC + A+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+F V +TAMISGY G ++L +F + P+ +T++S++ G
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
AL+LG+ + G + + A+IDMY+KCG + A E+F L ++ +VSW +MI
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT 515
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYDDKG 477
CA + A+D+F Q+ + + V+ A L AC + G AI +I++
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH---- 571
Query: 478 ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
S ++ S + D+ + G LK A++ ++M K+ W +++ AC H
Sbjct: 572 -SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNH 621
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 210/452 (46%), Gaps = 23/452 (5%)
Query: 9 RLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+L R+ + WN I V ++L F +M + + P+ +TF + + +K
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 69 DLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLV 114
+L Y + IH +I++ + KC + A IF + DV + AM+
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
G+ G + L +F + V I + +T++ + L L + +H F I G D
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDN 474
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFY 232
++ I YAKC + +A +F ERL R +VSWNSM+ C D +++ +
Sbjct: 475 RCNIGCAVIDMYAKCGRMNLAYEIF----ERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
R M +G D ++ + LS+ + G+ +H I + DV +TLI MY+KC
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSM 351
G++ +A +F + ++ VSW ++I+ G L ++L LF M E +G PD +T L +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 352 ISGCGQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EK 409
IS C G ++ G ++F + G++ ++D++ + G + +A E ++P
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710
Query: 410 IVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
W T++ C L+ A +LM+LD
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLD 742
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 180/366 (49%), Gaps = 9/366 (2%)
Query: 92 DCAYKIFDEMAVR--DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQ 149
DC K+F + +R + WN+++ F + G L L ++ M G+ D T L +
Sbjct: 88 DCG-KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVK 146
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A + K+ + + +G+D + V ++ I +Y + + + +F + ++
Sbjct: 147 ACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK--DC 204
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
V WN M+ G D + + M + + T +LS VC L+ V H
Sbjct: 205 VIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS--VCASKLLIDLGVQLH 262
Query: 270 G--IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
G + G D + S+ N+L+SMYSKCG D A LF + V+W MISGY Q G ++
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Query: 328 EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
E+L F+ M ++G LPD +T S++ + LE K Y + ++ + +ALI
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 388 DMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
D Y KC + A+ +F VV +T MI+G NG ++++L++F L+++ + PN +
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 448 TFLAVL 453
T +++L
Sbjct: 443 TLVSIL 448
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 143/317 (45%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L QA + L K VH+F I + D + YA C +F ++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
++ WNS+++ + +L FY M+ G DV+T L+ + V + +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
G D + V ++LI Y + G ID LFD + + V W M++GYA+ G L
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
D ++ F M P+ VT ++S C ++LG G+ + N+L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+ MYSKCG DA +LF + V+W MI+G +G E+L F++++ + P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 447 VTFLAVLQACTHTGFLE 463
+TF ++L + + LE
Sbjct: 341 ITFSSLLPSVSKFENLE 357
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 203/621 (32%), Positives = 328/621 (52%), Gaps = 20/621 (3%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N + E ++ + L F M ++D+E + +TF + K+ L Q +H +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
+ + K + A +FD M+ RD+ SWN+++ G AQ G + L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIH-AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F + G++ D T+ + +AA + LSL K VH I I +D V I +Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
+ +K AE++F E +V+WN+M+AG T +L + M G R D T+
Sbjct: 464 RNRCMKEAEILF---ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
++ + A+ QG+ VH++ I G+DLD+ V + ++ MY KCGD+ +A+ FD I
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
V+WT MISG + G+ + A +F M G LPD T+ ++ ALE G+
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
A ++ V +L+DMY+KCGSI DA LF + + +W M+ G A +GE
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY 487
E L LF Q+ L ++P++VTF+ VL AC+H+G + + + + D GI PE++HY
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGI--KPEIEHY 758
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP 547
SC+AD LGR G +K+A + ++SM +++ A ++ TLL AC++ + E G+ VA L +LEP
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEP 818
Query: 548 HSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHA 607
++ YV ++N YA +WD + RTMMK ++VKK PG S + K F +DR +
Sbjct: 819 LDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNR 878
Query: 608 ESELTYPVLDCLALHSREEAY 628
++EL Y + + ++E Y
Sbjct: 879 QTELIYRKVKDMIRDIKQEGY 899
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 230/537 (42%), Gaps = 68/537 (12%)
Query: 22 WNS------QIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQM 75
WNS Q E V +N + LLFR ++Q+ + + +T + K C + S+
Sbjct: 108 WNSILAAYAQSSECVVEN-IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 76 IHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
HG+ K + ++K ++ +F+EM RDV WN ML + +MGF
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E + L G+ + +T+ L + + G D+D
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARIS-------------------GDDSDAG---- 263
Query: 182 WISSYAKCDDLK-MAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
+ S+A +D ++E++F N ++ + ++ L + M+ +
Sbjct: 264 QVKSFANGNDASSVSEIIF------------RNKGLSEYLHSGQYSALLKCFADMVESDV 311
Query: 241 RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARV 300
D T + +L++ V ++L G+ VH + G DL ++V N+LI+MY K AR
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371
Query: 301 LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ-SG 359
+FD + +R +SW ++I+G AQ G EA+ LF + G PD T+ S++
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 360 ALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIA 419
L L K +A + V ALID YS+ + +A E+ + +V+W M+A
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMA 490
Query: 420 GCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGIS 479
G + + + L LF + + R + T V + C + +G + Y K
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH--AYAIKS-G 547
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGE 536
Y+ +L S + D+ + G + A S+P+ D W T++ C IE GE
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC-----IENGE 598
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 210/472 (44%), Gaps = 68/472 (14%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMA 102
F F+ A SDL+ + H I+ S + KC L A ++FD+M
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 103 VRDVASWNAMLVGFAQMG--FLENVLRLFYNMRLVGIQADFVTVMGLT---QAAIHAKHL 157
RD+ SWN++L +AQ +EN+ + F R++ + + M L+ + +H+ ++
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVA 217
+S H + IG+D D V ++ Y K +K +++F E R VV WN M
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLF--EEMPYRDVVLWNLM-- 217
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
L Y M GF+ + + L S+F HS G++ ++
Sbjct: 218 -----------LKAYLEM---GFKEE---AIDLSSAF------------HSSGLNPN-EI 247
Query: 278 DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM----ISGYAQKGDLDEALRLF 333
+ ++ + S G + S F D + VS +S Y G L+ F
Sbjct: 248 TLRLLARISGDDSDAGQVKS----FANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCF 303
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M + D VT + M++ + +L LG+ A GL + V N+LI+MY K
Sbjct: 304 ADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL 363
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G AR +F + E+ ++SW ++IAG A NG VEA+ LF QL+ L+P++ T +VL
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEA 503
+A + L +G ++S Q I N D + + + D R +KEA
Sbjct: 424 KAASS---LPEGLSLS-KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I + E + +F QM+ + P+ T +AKA + L+ L + IH + +
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 82 K-----SPFV---------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K PFV KC +D AY +F + + ++ +WNAMLVG AQ G + L+
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF M+ +GI+ D VT +G+ A H+
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLSACSHS 732
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
I WN+ + E +TL LF+QMK I+P+ +TF + AC+
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 333/624 (53%), Gaps = 40/624 (6%)
Query: 29 AVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGH-------- 79
+VN++ H +L +F + K D++PN+ T+ F A + D ++IHG
Sbjct: 94 SVNES-PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDS 152
Query: 80 -------IVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM 132
IVK F K R++ A K+FD M +D WN M+ G+ + +++F ++
Sbjct: 153 ELLLGSNIVKMYF-KFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 133 -RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDD 191
+ D T++ + A + L L +HS G + V +IS Y+KC
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 192 LKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
+KM +F E R +V++N+M+ G T + + SL+ ++ +M +G RL +T+VSL+
Sbjct: 272 IKMGSALFR--EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 252 SSFVCPEALVQGRL-----VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
V G L +H + + F SV L ++YSK +I+SAR LFD
Sbjct: 330 P--------VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
+++ SW AMISGY Q G ++A+ LF M+ + P+ VT+ ++S C Q GAL LGKW
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ S + ++ V ALI MY+KCGSI +AR LF + +K V+W TMI+G L+G+
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPEL 484
EAL++F++++ + P VTFL VL AC+H G +++G I S+I + P +
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR----YGFEPSV 557
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
HY+CM D+LGR G L+ AL F+++M I+ + +W TLL AC+IH + + V+ LF+
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE 617
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
L+P + +V ++N ++ + A +R K+ ++ K PG +L I FT+ D+
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 605 YHAESELTYPVLDCLALHSREEAY 628
H + + Y L+ L RE Y
Sbjct: 678 SHPQVKEIYEKLEKLEGKMREAGY 701
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
H+ I +GF D+S++ L S G I AR +F + + ++ G++
Sbjct: 39 THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 326 LDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+L +F + + +L P+ T IS G+ A G +++ +
Sbjct: 99 PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS 158
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM-ELDLR 443
++ MY K + DAR++F +PEK + W TMI+G N +VE++ +F L+ E R
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAI 468
+ T L +L A L G I
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQI 243
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
++ WN+ I + LFR+M++++ PN +T I ACA+L L + +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 78 GHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+ + F KC + A ++FD M ++ +WN M+ G+ G +
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
L +FY M GI VT + + A HA
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHA 534
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 332 bits (851), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 316/623 (50%), Gaps = 23/623 (3%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDI-EPNNLTFPFIAKACAKLSDLIYSQM 75
S + WNS + + H TL +F+++ I P++ TFP + KA L +M
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 76 IHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
IH +VKS +V K + + + ++FDEM RDVASWN ++ F Q G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
E L LF M G + + V++ A L K +H + G + D V +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ Y KCD L++A VF + + ++V+WNSM+ G + M+ G R
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRK--SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
TT+ S+L + L+ G+ +H + I + D+ V +LI +Y KCG+ + A +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
F SW MIS Y G+ +A+ ++ M + G PD+VT S++ C Q AL
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
E GK L+ + ++ +AL+DMYSKCG+ +A +F ++P+K VVSWT MI+
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+G+ EAL F ++ + L+P+ VT LAVL AC H G +++G GI
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI--E 544
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD-AGIWGTLLCACKIHLNIEIGEYVAY 540
P ++HYSCM D+LGR G+L EA + +Q P SD A + TL AC +HL +G+ +A
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
L + P A+ Y+ + N YA G WD +R MK ++K PG S ++ K C F
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 601 AEDRYHAESELTYPVLDCLALHS 623
AEDR H +E Y +CLAL S
Sbjct: 665 AEDRSHLRAENVY---ECLALLS 684
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 167/320 (52%), Gaps = 2/320 (0%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
L + K L +K VH + +G+ DV +C + I+ Y C D A VF + R
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR- 68
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL-DVTTVVSLLSSFVCPEALVQGRL 265
V WNS+++G + F D+L ++ ++ + D T +++ ++ GR+
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H+ + G+ DV V ++L+ MY+K +++ +FD + +R SW +IS + Q G+
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
++AL LF ME++G P+ V++ IS C + LE GK G + + V +A
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY KC + ARE+F +P K +V+W +MI G G+ +++ ++++ RP+
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 446 RVTFLAVLQACTHTGFLEKG 465
+ T ++L AC+ + L G
Sbjct: 309 QTTLTSILMACSRSRNLLHG 328
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 10/270 (3%)
Query: 258 EALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WTAM 316
++L + +LVH + G DV + +LI++Y C D SAR +F+ R+ V W ++
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSL 77
Query: 317 ISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG 375
+SGY++ + L +F + + +PD T ++I G G LG+ G
Sbjct: 78 MSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSG 137
Query: 376 LKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFH 435
+V+V ++L+ MY+K ++ ++F +PE+ V SW T+I+ +GE +AL+LF
Sbjct: 138 YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFG 197
Query: 436 QLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADL 493
++ PN V+ + AC+ +LE+G I K + ELD Y S + D+
Sbjct: 198 RMESSGFEPNSVSLTVAISACSRLLWLERGKEI-----HRKCVKKGFELDEYVNSALVDM 252
Query: 494 LGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G+ L+ A + Q MP KS W +++
Sbjct: 253 YGKCDCLEVAREVFQKMPRKSLVA-WNSMI 281
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 328 bits (842), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 209/657 (31%), Positives = 333/657 (50%), Gaps = 40/657 (6%)
Query: 8 PRLNRIYRSSTINQW--NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
P N + +S I + N Q EA+ L+ +M Q D+ P+ F I KACA
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIR---------LYLKMLQEDLVPDQFAFGSIIKACA 179
Query: 66 KLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNA 111
SD+ + +H ++K + +V+ +++ A ++F + ++D+ SW++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239
Query: 112 MLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLK-----SVHSF 166
++ GF+Q+GF L M G+ + G + A SLL+ +H
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS----SLLRPDYGSQIHGL 295
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
I + + + YA+C L A VF IE SWN ++AG D
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP--DTASWNVIIAGLANNGYAD 353
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
++++ + M +GF D ++ SLL + P AL QG +HS+ I +GF D++V N+L+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 287 SMYSKCGDIDSARVLFDGICDRT-RVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
+MY+ C D+ LF+ + VSW +++ Q E LRLF M + PD
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+T+ +++ GC + +L+LG Y+ GL + N LIDMY+KCGS+G AR +F +
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ + VVSW+T+I G A +G EAL LF ++ + PN VTF+ VL AC+H G +E+G
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ + GIS P +H SC+ DLL R G+L EA F+ M ++ D +W TLL A
Sbjct: 594 LKLYATMQTEHGIS--PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
CK N+ + + A + K++P ++ +V + + +A G W+ A +R+ MK++ VKK P
Sbjct: 652 CKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIP 711
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIP-EHEAG 641
GQS I K F AED +H E + Y VL + +E H K + HE G
Sbjct: 712 GQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECNPQHKKRLQFIHETG 768
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 217/460 (47%), Gaps = 13/460 (2%)
Query: 68 SDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
S+ Y +++ HI+ S + KC L A ++FD M R++ S+ +++ G++Q G +R
Sbjct: 96 SNCKYDTILNNHIL-SMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
L+ M + D + +A + + L K +H+ I + + + N I+ Y
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT-YGDKFDDSLNFYRHMMYNGFRLDVTT 246
+ + + A VF GI ++ ++SW+S++AG + G +F+ + + + F +
Sbjct: 215 RFNQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN--TLISMYSKCGDIDSARVLFDG 304
S L + C L HG+ +L + I +L MY++CG ++SAR +FD
Sbjct: 273 FGSSLKA--CSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQ 330
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
I SW +I+G A G DEA+ +F M ++G +PD +++ S++ + AL G
Sbjct: 331 IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG 390
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCAL 423
+Y G ++ VCN+L+ MY+ C + LF VSW T++ C
Sbjct: 391 MQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQ 450
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+ + VE L LF ++ + P+ +T +L+ C L+ G + G++ PE
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL-KTGLA--PE 507
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
+ + D+ + G L +A SM + D W TL+
Sbjct: 508 QFIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 125/237 (52%), Gaps = 9/237 (3%)
Query: 230 NFYRHMMY--------NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV 281
NFYR + + F++ + T +SL+ + +L QGR +H H ++ D +
Sbjct: 45 NFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTIL 104
Query: 282 INTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE 341
N ++SMY KCG + AR +FD + +R VS+T++I+GY+Q G EA+RL+ M
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
+PD S+I C S + LGK +++ NALI MY + + DA
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQACT 457
+FY +P K ++SW+++IAG + G EAL +++ + PN F + L+AC+
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 170/393 (43%), Gaps = 16/393 (4%)
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T + L A ++ L+ + +H ++ D + N +S Y KC L+ A VF +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
ER +VS+ S++ G + + +++ Y M+ D S++ + +
Sbjct: 129 PER--NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H+ I + N LI+MY + + A +F GI + +SW+++I+G++Q
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 323 KGDLDEALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
G EAL M + G P+ S + C + G L N +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+L DMY++CG + AR +F + SW +IAG A NG EA+ +F Q+
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 442 LRPNRVTFLAVLQACTHTGFLEKGWAIS--IIQYD---DKGISYNPELDHYSCMADLLGR 496
P+ ++ ++L A T L +G I II++ D + N L Y+ +DL
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVC-NSLLTMYTFCSDLYC- 424
Query: 497 KGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + +D+ W T+L AC H
Sbjct: 425 ------CFNLFEDFRNNADSVSWNTILTACLQH 451
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 328 bits (841), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 205/640 (32%), Positives = 338/640 (52%), Gaps = 44/640 (6%)
Query: 22 WNSQIR---EAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
WN I A N +E + LF M + + P+ TFP + KAC + D IH
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 79 HIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+K F+ + + A +FDEM VRD+ SWNAM+ G+ Q G +
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
L L +R + D VTV+ L A A + ++HS+ I G+++++ V N I
Sbjct: 235 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 185 SYAKCDDLKMAELVFCGIEERL--RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
YA+ L+ + VF +R+ R ++SWNS++ ++ +++ ++ M + +
Sbjct: 291 LYAEFGRLRDCQKVF----DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVL 301
D T++SL S + R V + G+ L D+++ N ++ MY+K G +DSAR +
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP-DLVTVLSMISGCGQSGA 360
F+ + + +SW +ISGYAQ G EA+ ++ ME GE+ + T +S++ C Q+GA
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
L G GL +V V +L DMY KCG + DA LFY +P V W T+IA
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGIS 479
+G +A+ LF ++++ ++P+ +TF+ +L AC+H+G +++G W ++Q D GI+
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ-TDYGIT 585
Query: 480 YNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVA 539
P L HY CM D+ GR G+L+ AL F++SM ++ DA IWG LL AC++H N+++G+ +
Sbjct: 586 --PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIAS 643
Query: 540 YCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTF 599
LF++EP +V ++N YA G+W+GV IR++ ++K PG S ++ K F
Sbjct: 644 EHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVF 703
Query: 600 TAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWIPEHE 639
++ H E Y L L +A + ++P+H
Sbjct: 704 YTGNQTHPMYEEMYRELTAL------QAKLKMIGYVPDHR 737
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 225/444 (50%), Gaps = 26/444 (5%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRL-VGIQADFVTVMGLTQAAI 152
A FD + RDV +WN M+ G+ + G V+R F L G+ D+ T + +A
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA-- 162
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSW 212
+ + +H + G DV V + I Y++ + A ++F E +R + SW
Sbjct: 163 -CRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF--DEMPVRDMGSW 219
Query: 213 NSMVAGCTYGDKFDDSLNFYRHMMYNGFR-LDVTTVVSLLSSFVCPEA--LVQGRLVHSH 269
N+M++G ++L + NG R +D TVVSLLS+ C EA +G +HS+
Sbjct: 220 NAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSA--CTEAGDFNRGVTIHSY 272
Query: 270 GIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEA 329
I +G + ++ V N LI +Y++ G + + +FD + R +SW ++I Y A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 330 LRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGG-LKDNVMVCNALID 388
+ LF M + PD +T++S+ S Q G + + + G +++ + NA++
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMEL-DLRPNRV 447
MY+K G + AR +F LP V+SW T+I+G A NG EA+++++ + E ++ N+
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 448 TFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHY--SCMADLLGRKGKLKEALD 505
T+++VL AC+ G L +G ++ + + LD + + +AD+ G+ G+L++AL
Sbjct: 453 TWVSVLPACSQAGALRQG-----MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 506 FVQSMPIKSDAGIWGTLLCACKIH 529
+P + ++ W TL+ H
Sbjct: 508 LFYQIP-RVNSVPWNTLIACHGFH 530
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 138/288 (47%), Gaps = 18/288 (6%)
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
DV T+ ++ + L RLV S I +V + L+++Y G++ AR F
Sbjct: 56 DVHTLFRYCTNLQSAKCL-HARLVVSKQIQ-----NVCISAKLVNLYCYLGNVALARHTF 109
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLF-FAMEAAGELPDLVTVLSMISGCGQSGAL 361
D I +R +W MISGY + G+ E +R F M ++G PD T S++ C +
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 166
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
G A G +V V +LI +YS+ ++G+AR LF +P + + SW MI+G
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+G EAL L + L +D VT +++L ACT G +G ++I Y K
Sbjct: 227 CQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRG--VTIHSYSIKH-GLE 279
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
EL + + DL G+L++ M ++ D W +++ A +++
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELN 326
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 205/663 (30%), Positives = 338/663 (50%), Gaps = 57/663 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
+NS IR + ++ +LLF +M + I P+ TFPF ACAK IHG IV
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 82 KSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + K C LD A K+FDEM+ R+V SW +M+ G+A+ F ++ +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 128 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF+ M R + + VT++ + A + L + V++F + G++ + + + + Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC+ + +A+ +F E + N+M + ++L + MM +G R D +
Sbjct: 282 MKCNAIDVAKRLF--DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
++S +SS ++ G+ H + + GF+ ++ N LI MY KC D+A +FD +
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 307 DRTRVSWTAMISGYAQKGDLD-------------------------------EALRLFFA 335
++T V+W ++++GY + G++D EA+ +F +
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 336 MEAA-GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG 394
M++ G D VT++S+ S CG GAL+L KW Y G++ +V + L+DM+S+CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 395 SIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQ 454
A +F +L + V +WT I A+ G A++LF ++E L+P+ V F+ L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 455 ACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKS 514
AC+H G +++G I G+S PE HY CM DLLGR G L+EA+ ++ MP++
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVS--PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 515 DAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRT 574
+ IW +LL AC++ N+E+ Y A + L P YV ++N YA GRW+ +A +R
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 575 MMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
MK ++K PG S I GKT FT+ D H E +LD ++ +SHL
Sbjct: 698 SMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR------ASHLGH 751
Query: 635 IPE 637
+P+
Sbjct: 752 VPD 754
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 163/312 (52%), Gaps = 9/312 (2%)
Query: 153 HAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC---DDLKMAELVFCGIEERLRTV 209
+ K + LK H G+D DVS ++ + + L A+ VF E T
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN-SESYGTC 99
Query: 210 VSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSH 269
+NS++ G ++++ + MM +G D T LS+ C ++ +G + H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA--CAKSRAKGNGIQIH 157
Query: 270 G--IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLD 327
G + G+ D+ V N+L+ Y++CG++DSAR +FD + +R VSWT+MI GYA++
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 328 EALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+A+ LFF M E+ P+ VT++ +IS C + LE G+ + + G++ N ++ +AL
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY KC +I A+ LF + M + G EAL +F+ +M+ +RP+R
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 447 VTFLAVLQACTH 458
++ L+ + +C+
Sbjct: 338 ISMLSAISSCSQ 349
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 163/381 (42%), Gaps = 68/381 (17%)
Query: 6 LPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA 65
+ RL Y +S ++ N+ V + + L +F M + + P+ ++ +C+
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 66 KLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNA 111
+L ++++ + HG+++++ F +KC R D A++IFD M+ + V +WN+
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 112 MLVGFAQMG-------------------------------FLENVLRLFYNMR-LVGIQA 139
++ G+ + G E + +F +M+ G+ A
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 140 DFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVF 199
D VT+M + A H L L K ++ + G+ DV + T + +++C D + A +F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 200 CGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEA 259
+ R V +W + + + ++ + M+ G + D V L++
Sbjct: 529 NSLTN--RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 260 LVQGR-----LVHSHG-----IHYGFDLDVSVINTLISMYSKCGDIDSA-RVLFDGICDR 308
+ QG+ ++ HG +HYG ++ + + G ++ A +++ D +
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYG---------CMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 309 TRVSWTAMISGYAQKGDLDEA 329
V W ++++ +G+++ A
Sbjct: 638 NDVIWNSLLAACRVQGNVEMA 658
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 317/623 (50%), Gaps = 28/623 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I V ++ +L LF Q+ ++++ P+ + AC+ L L + IH HI+
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ +VKC R+ A+K+F+ M +++ SW +L G+ Q + +
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF +M G++ D + + L VH++ I + D V N+ I YA
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCT-YGDKFD--DSLNFYRHMMYNGFRLDV 244
KCD L A VF VV +N+M+ G + G +++ ++LN +R M + R +
Sbjct: 397 KCDCLTDARKVFDIFAAA--DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T VSLL + +L + +H YG +LD+ + LI +YS C + +R++FD
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + V W +M +GY Q+ + +EAL LF ++ + E PD T +M++ G +++LG
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ F GL+ N + NAL+DMY+KCGS DA + F + + VV W ++I+ A +
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD---DKGISYN 481
GE +AL + ++M + PN +TF+ VL AC+H G +E G + Q++ GI
Sbjct: 635 GEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG----LKQFELMLRFGI--E 688
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
PE +HY CM LLGR G+L +A + ++ MP K A +W +LL C N+E+ E+ A
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
+P + + ++N YA G W +R MK V K PG+S IN + F +
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLS 808
Query: 602 EDRYHAESELTYPVLDCLALHSR 624
+D+ H ++ Y VLD L + R
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQIR 831
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 8/368 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQA-- 150
A K+F++M R++ SW+ M+ G E L +F R + + QA
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 151 AIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVV 210
+ + ++ + SF + G D DV V I Y K ++ A LVF + E+ + V
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK--STV 215
Query: 211 SWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHG 270
+W +M++GC + SL + +M + D + ++LS+ L G+ +H+H
Sbjct: 216 TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Query: 271 IHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEAL 330
+ YG ++D S++N LI Y KCG + +A LF+G+ ++ +SWT ++SGY Q EA+
Sbjct: 276 LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAM 335
Query: 331 RLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
LF +M G PD+ S+++ C AL G Y L ++ V N+LIDMY
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG---EFVEALDLFHQLMELDLRPNRV 447
+KC + DAR++F VV + MI G + G E EAL++F + +RP+ +
Sbjct: 396 AKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLL 455
Query: 448 TFLAVLQA 455
TF+++L+A
Sbjct: 456 TFVSLLRA 463
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 310/600 (51%), Gaps = 32/600 (5%)
Query: 8 PRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL 67
PR+N I W+ IR + + A K L L+ +M + + P T+PF+ KACA L
Sbjct: 64 PRINPI-------AWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGL 116
Query: 68 SDLIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAML 113
+ ++IH H+ S F KC L+ A K+FDEM RD+ +WNAM+
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 114 VGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
GF+ L +V+ LF +MR + G+ + T++G+ A A L K+VH + +G
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 173 DADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFY 232
D+ V + YAK + A VF + + V+W++M+ G + ++ +
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVF--DLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 233 RHMMYNGFRLDVTTVVSLLSSFVCPE--ALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
M+ N VT V L C L GR VH + + GF LD++V NT+IS Y+
Sbjct: 295 FQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYA 354
Query: 291 KCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
K G + A F I + +S+ ++I+G +E+ RLF M +G PD+ T+L
Sbjct: 355 KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI 410
+++ C AL G Y G N +CNAL+DMY+KCG + A+ +F + ++
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRD 474
Query: 411 VVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI-- 468
+VSW TM+ G ++G EAL LF+ + E + P+ VT LA+L AC+H+G +++G +
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFN 534
Query: 469 SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKI 528
S+ + D I P +DHY+CM DLL R G L EA DFV MP + D + GTLL AC
Sbjct: 535 SMSRGDFNVI---PRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWT 591
Query: 529 HLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
+ N E+G V+ + L + V ++N Y+ RW+ A IR + K+ + K PG S
Sbjct: 592 YKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 232/496 (46%), Gaps = 32/496 (6%)
Query: 57 FPFIAKACAKLSDLIYSQMIHGHIVKSP---------------FVKCDRLDCAYKIFDEM 101
F + + C + +L+ Q+IH H++K + C+ ++ A +FDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 102 AVRDV--ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
+ +W+ M+ +A F E L L+Y M G++ T + +A + +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
K +HS D+ VC + YAKC +L+MA VF E R +V+WN+M++G
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVF--DEMPKRDMVAWNAMISGF 179
Query: 220 TYGDKFDDSLNFYRHM-MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ D + + M +G +++T+V + + AL +G+ VH + GF D
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
+ V ++ +Y+K I AR +FD + V+W+AMI GY + + EA +FF M
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 339 AGELPDL--VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ + V + ++ GC + G L G+ YA G ++ V N +I Y+K GS+
Sbjct: 300 NDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA F + K V+S+ ++I GC +N E+ LFH++ +RP+ T L VL AC
Sbjct: 360 CDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 457 THTGFLEKGWAI---SIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
+H L G + ++ G + N + + + D+ + GKL A +M K
Sbjct: 420 SHLAALGHGSSCHGYCVVH----GYAVNTSI--CNALMDMYTKCGKLDVAKRVFDTMH-K 472
Query: 514 SDAGIWGTLLCACKIH 529
D W T+L IH
Sbjct: 473 RDIVSWNTMLFGFGIH 488
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 323/631 (51%), Gaps = 64/631 (10%)
Query: 64 CAKLSDLIYSQMIHGHIVKS-----PFVKCD-----------RLDCAYKIFDEMAVRDVA 107
C L L + HGH++++ P+ L+ A K+FDE+ +
Sbjct: 40 CVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 108 SWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ---ADFVTVMGLTQAAIHAKHLSLLKSVH 164
+WN ++ +A + VL ++ + +V + T L +AA LSL +S+H
Sbjct: 97 AWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
+ V +DV V N+ I Y C DL A VF I+E+ VVSWNSM+ G
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK--DVVSWNSMINGFVQKGS 212
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINT 284
D +L ++ M + T+V +LS+ L GR V S+ ++++++ N
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA----------------------- 321
++ MY+KCG I+ A+ LFD + ++ V+WT M+ GYA
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 322 --------QKGDLDEALRLFFAMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYAC 372
Q G +EAL +F ++ + + +T++S +S C Q GALELG+W +Y
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
G++ N V +ALI MYSKCG + +RE+F ++ ++ V W+ MI G A++G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMAD 492
+F+++ E +++PN VTF V AC+HTG +++ ++ + GI PE HY+C+ D
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV--PEEKHYACIVD 510
Query: 493 LLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
+LGR G L++A+ F+++MPI +WG LL ACKIH N+ + E L +LEP +
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 553 YVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELT 612
+V ++N YA G+W+ V+ +R M+ +KK PG S I+G F + D H SE
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Query: 613 Y----PVLDCLALHSREEAYSSHLKWIPEHE 639
Y V++ L + E S L+ I E E
Sbjct: 631 YGKLHEVMEKLKSNGYEPEISQVLQIIEEEE 661
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 219/469 (46%), Gaps = 47/469 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQM-KQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN+ IR + + ++ F M ++ PN TFPF+ KA A++S L Q +HG
Sbjct: 98 WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
VKS + C LD A K+F + +DV SWN+M+ GF Q G + L
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M ++A VT++G+ A ++L + V S+ V+ ++++ N + Y
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 187 AKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVA 217
KC ++ A+ +F +EE+ + +V+WN++++
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 218 GCTYGDKFDDSL-NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
K +++L F+ + +L+ T+VS LS+ AL GR +HS+ +G
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
++ V + LI MYSKCGD++ +R +F+ + R W+AMI G A G +EA+ +F+ M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 337 EAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
+ A P+ VT ++ C +G + E F + G+ ++D+ + G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 396 IGDARELFYALPEKIVVS-WTTMIAGCALNGEFVEALDLFHQLMELDLR 443
+ A + A+P S W ++ C ++ A +L+EL+ R
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 566
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 122/283 (43%), Gaps = 48/283 (16%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + WNS I V K K L LF++M+ D++ +++T + ACAK+ +L + +
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFD--------------------- 99
+ +I ++ + KC ++ A ++FD
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 100 ----------EMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-GIQADFVTVMGLT 148
M +D+ +WNA++ + Q G L +F+ ++L ++ + +T++
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 149 QAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRT 208
A L L + +HS+ G+ + V + I Y+KC DL+ + VF +E+ R
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK--RD 430
Query: 209 VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL 251
V W++M+ G +++++ + M + + T ++
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVF 473
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 297/598 (49%), Gaps = 68/598 (11%)
Query: 81 VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
V S + K +D + FD++ RD SW M+VG+ +G +R+ +M GI+
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T+ + + + + K VHSF + +G+ +VSV N+ ++ YAKC D MA+ VF
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 201 GIEER-----------------------------LRTVVSWNSMVAGCTYGDKFDDSLNF 231
+ R R +V+WNSM++G +L+
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 232 YRHMMYNGF-RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
+ M+ + D T+ S+LS+ E L G+ +HSH + GFD+ V+N LISMYS
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 291 KCGDIDSAR-----------------VLFDG----------------ICDRTRVSWTAMI 317
+CG +++AR L DG + DR V+WTAMI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 318 SGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
GY Q G EA+ LF +M G+ P+ T+ +M+S +L GK A G
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+V V NALI MY+K G+I A F + E+ VSWT+MI A +G EAL+LF
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD-DKGISYNPELDHYSCMADLLG 495
++ LRP+ +T++ V ACTH G + +G + D DK I P L HY+CM DL G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII---PTLSHYACMVDLFG 562
Query: 496 RKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVE 555
R G L+EA +F++ MPI+ D WG+LL AC++H NI++G+ A L LEP ++ Y
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 556 MANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTY 613
+AN Y+ G+W+ A IR MK +VKK G S + K F ED H E Y
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 211/485 (43%), Gaps = 84/485 (17%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W + I N + HK + + M + IEP T + + A + + +H IV
Sbjct: 114 WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV 173
Query: 82 K--------------SPFVKC----------DR---------------------LDCAYK 96
K + + KC DR +D A
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVTVMGLTQAAIHAK 155
F++MA RD+ +WN+M+ GF Q G+ L +F M R + D T+ + A + +
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 156 HLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKC-------------------------- 189
L + K +HS + G D V N IS Y++C
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 190 -------DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
D+ A+ +F +++ R VV+W +M+ G + +++N +R M+ G R
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKD--RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T+ ++LS +L G+ +H + G VSV N LI+MY+K G+I SA F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 303 DGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
D I C+R VSWT+MI AQ G +EAL LF M G PD +T + + S C +G +
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 362 ELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIA 419
G+ +FD + + ++D++ + G + +A+E +P E VV+W ++++
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS 591
Query: 420 GCALN 424
C ++
Sbjct: 592 ACRVH 596
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 149/338 (44%), Gaps = 67/338 (19%)
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
NT +S+Y+K D+ F + +R VSW +M+ G ++ ++ M+ G
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQR--DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD----- 294
T+ ++L+S + G+ VHS + G +VSV N+L++MY+KCGD
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 295 --------------------------IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDE 328
+D A F+ + +R V+W +MISG+ Q+G
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 329 ALRLFFAMEAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALI 387
AL +F M L PD T+ S++S C L +GK ++ + G + +V NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 388 DMYSKCGSIGDAREL---------------------------------FYALPEKIVVSW 414
MYS+CG + AR L F +L ++ VV+W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAV 452
T MI G +G + EA++LF ++ RPN T A+
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NT++S YSK GD+DS FD + R VSWT MI GY G +A+R+ M G
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG-------- 394
P T+ ++++ + +E GK ++ GL+ NV V N+L++MY+KCG
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 395 --------------------SIGD---ARELFYALPEKIVVSWTTMIAGCALNGEFVEAL 431
+G A F + E+ +V+W +MI+G G + AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 432 DLFHQLMELD-LRPNRVTFLAVLQACTHTGFLEKGWAIS----IIQYDDKGISYNPELDH 486
D+F +++ L P+R T +VL AC + L G I +D GI N +
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 487 YS 488
YS
Sbjct: 324 YS 325
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 27/207 (13%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FV 86
LFR M PN+ T + + L+ L + + IHG VKS +
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYA 459
Query: 87 KCDRLDCAYKIFDEMAV-RDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
K + A + FD + RD SW +M++ AQ G E L LF M + G++ D +T +
Sbjct: 460 KAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYV 519
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
G+ A HA ++ + F + VD + +S YA DL + +E
Sbjct: 520 GVFSACTHAGLVN--QGRQYFDMMKDVDKIIPT----LSHYACMVDLFGRAGLLQEAQEF 573
Query: 206 LRT------VVSWNSMVAGCTYGDKFD 226
+ VV+W S+++ C D
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVHKNID 600
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 375 GLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLF 434
GL +V + N L+++YSK G AR+LF +P + SW T+++ + G+ + F
Sbjct: 44 GLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFF 103
Query: 435 HQLMELD 441
QL + D
Sbjct: 104 DQLPQRD 110
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 322/627 (51%), Gaps = 26/627 (4%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I+ + + + + +M ++ + T+PF+ K+ A +S L + IH ++
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 82 KSPFVK----CD-------RLDCAY---KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K FV C+ +L CA+ K+F+EM RD+ SWN+M+ G+ +G + L
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLM 217
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISSY 186
LF M G + D + M A H + K +H + ++ DV V + + Y
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC--TYGDKFDDSLNFYRHMMYNGFRLDV 244
+K ++ AE +F G+ +R +V+WN M+ GC G D L F + NG + DV
Sbjct: 278 SKYGEVSYAERIFNGMIQR--NIVAWNVMI-GCYARNGRVTDAFLCFQKMSEQNGLQPDV 334
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T ++LL + A+++GR +H + + GF + + LI MY +CG + SA V+FD
Sbjct: 335 ITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDR 390
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ ++ +SW ++I+ Y Q G AL LF + + +PD T+ S++ +S +L G
Sbjct: 391 MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
+ Y N ++ N+L+ MY+ CG + DAR+ F + K VVSW ++I A++
Sbjct: 451 REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVH 510
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G ++ LF +++ + PN+ TF ++L AC+ +G +++GW + GI +P +
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGI--DPGI 568
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
+HY CM DL+GR G A F++ MP A IWG+LL A + H +I I E+ A +FK
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFK 628
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
+E + YV + N YA GRW+ V I+ +M+ + + +S GK+ FT DR
Sbjct: 629 MEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDR 688
Query: 605 YHAESELTYPVLDCLALHSREEAYSSH 631
H + Y VLD ++ EE H
Sbjct: 689 SHVATNKIYEVLDVVSRMVGEEDIYVH 715
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 228/468 (48%), Gaps = 20/468 (4%)
Query: 4 SSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKA 63
++L + RIY S +S+ + K ++ L + +P L K
Sbjct: 3 ATLLSQCYRIYNSDACKCVSSENHQTTGKRNGNRNL----EFDSGISKPARLVLRDRYKV 58
Query: 64 CAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
+++D ++ + G F ++ A ++FDEM D WN M+ GF G
Sbjct: 59 TKQVNDPALTRALRG------FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 124 NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWI 183
++ + M G++AD T + ++ L K +H+ I +G +DV VCN+ I
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 184 SSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG-CTYGDKFDDSLNFYRHMMYNGFRL 242
S Y K AE VF + E R +VSWNSM++G GD F SL ++ M+ GF+
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPE--RDIVSWNSMISGYLALGDGF-SSLMLFKEMLKCGFKP 229
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDSARVL 301
D + +S L + + G+ +H H + + DV V+ +++ MYSK G++ A +
Sbjct: 230 DRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGELPDLVTVLSMISGCGQSGA 360
F+G+ R V+W MI YA+ G + +A F M E G PD++T ++++ S
Sbjct: 290 FNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAI 346
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
LE G+ YA G ++++ ALIDMY +CG + A +F + EK V+SW ++IA
Sbjct: 347 LE-GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAA 405
Query: 421 CALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
NG+ AL+LF +L + L P+ T ++L A + L +G I
Sbjct: 406 YVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 315 bits (806), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 304/607 (50%), Gaps = 23/607 (3%)
Query: 41 LFRQMKQND--IEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-----SPFVK------ 87
LFRQM ++ P+++TF + C +H VK +PF+
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191
Query: 88 ---CD--RLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
C+ RLD A +F+E+ +D ++N ++ G+ + G + LF MR G Q
Sbjct: 192 KSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDF 251
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T G+ +A + +L + +H+ + G D SV N + Y+K D + ++F +
Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E VS+N +++ + D+++ SL+F+R M GF ++LS +L
Sbjct: 312 PEL--DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H + D + V N+L+ MY+KC + A ++F + RT VSWTA+ISGY Q
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
KG L+LF M + D T +++ +L LGK + G +NV
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+ L+DMY+KCGSI DA ++F +P++ VSW +I+ A NG+ A+ F +++E L
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+P+ V+ L VL AC+H GF+E+G GI+ P+ HY+CM DLLGR G+ E
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT--PKKKHYACMLDLLGRNGRFAE 607
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEP-HSAAPYVEMANKYA 561
A + MP + D +W ++L AC+IH N + E A LF +E AA YV M+N YA
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYA 667
Query: 562 LGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLAL 621
G W+ V +++ M+ +KK P S +N K F++ D+ H + ++ L
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Query: 622 HSREEAY 628
E Y
Sbjct: 728 EIEREGY 734
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 224/495 (45%), Gaps = 23/495 (4%)
Query: 71 IYSQMIHGHIVK-----SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
+Y +M H + V S VK + A +FD M R V +W ++ +A+ +
Sbjct: 70 VYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEA 129
Query: 126 LRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD--VSVCNT 181
+LF M D VT L A + + VH+F + +G D + ++V N
Sbjct: 130 FKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNV 189
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+ SY + L +A ++F I E + V++N+++ G + +S++ + M +G +
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T +L + V G+ +H+ + GF D SV N ++ YSK + R+L
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + + VS+ +IS Y+Q + +L F M+ G +M+S +L
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
++G+ A + V N+L+DMY+KC +A +F +LP++ VSWT +I+G
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
G L LF ++ +LR ++ TF VL+A L G + I +
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF------IIRS 481
Query: 482 PELDHY---SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIE--IGE 536
L++ S + D+ + G +K+A+ + MP + +A W L+ A + + E IG
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGA 540
Query: 537 YVAYCLFKLEPHSAA 551
+ L+P S +
Sbjct: 541 FAKMIESGLQPDSVS 555
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 225 FDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSV-IN 283
F D+ ++ GF D + S+F+ + L +G++ + ++ +V N
Sbjct: 29 FLDTRRVDARIIKTGFDTD-----TCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTN 83
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM--EAAGE 341
T+IS + K GD+ SAR LFD + DRT V+WT ++ YA+ DEA +LF M ++
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN--VMVCNALIDMYSKCGSIGDA 399
LPD VT +++ GC + +A G N + V N L+ Y + + A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
LF +PEK V++ T+I G +G + E++ LF ++ + +P+ TF VL+A
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 324/651 (49%), Gaps = 57/651 (8%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQ-NDIEPNNLTFPFIAKACAKLSDLIYSQM 75
S I +WN I + ++ L +F++M + + + N + ++ +L+ ++ +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 76 -----IHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFY 130
+ +++ +V+ L A ++F+ M RDV SWN ML G+AQ G +++ +F
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 131 NMRLVGIQADFVTVMGLTQAAIHAKHLS----LLKSVHSFGIHIGVDADVSVCNTWISSY 186
M + + V+ L A + + L KS ++ + VS N + +
Sbjct: 182 RM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL-------VS-WNCLLGGF 229
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
K + A F + +R VVSWN+++ G K D++ R + DV T
Sbjct: 230 VKKKKIVEARQFFDSMN--VRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFT 283
Query: 247 VVSLLSSFVCPEALVQGR-----LVHSHGIHYG------------------FDL----DV 279
+++S ++ + + R + + + + FD+ +V
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
S NT+I+ Y++CG I A+ LFD + R VSW AMI+GY+Q G EALRLF ME
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
G + + S +S C ALELGK GG + V NAL+ MY KCGSI +A
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
+LF + K +VSW TMIAG + +G AL F + L+P+ T +AVL AC+HT
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 460 GFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIW 519
G ++KG D G+ P HY+CM DLLGR G L++A + +++MP + DA IW
Sbjct: 524 GLVDKGRQYFYTMTQDYGVM--PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581
Query: 520 GTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRN 579
GTLL A ++H N E+ E A +F +EP ++ YV ++N YA GRW V +R M+
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641
Query: 580 QVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSS 630
VKK PG S I KT TF+ D +H E + + L+ L L ++ Y S
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 51/248 (20%)
Query: 276 DLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFA 335
D D+ N IS Y + G + A +F + + VS+ MISGY + G+ + A +LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF-- 118
Query: 336 MEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
E+P+ +L W N +I Y + +
Sbjct: 119 ----DEMPE----------------RDLVSW-----------------NVMIKGYVRNRN 141
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+G ARELF +PE+ V SW TM++G A NG +A +F ++ E N V++ A+L A
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSA 197
Query: 456 CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSD 515
+E+ + + + +S+N C+ +K K+ EA F SM ++ D
Sbjct: 198 YVQNSKMEEACMLFKSRENWALVSWN-------CLLGGFVKKKKIVEARQFFDSMNVR-D 249
Query: 516 AGIWGTLL 523
W T++
Sbjct: 250 VVSWNTII 257
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 311 bits (797), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 300/589 (50%), Gaps = 31/589 (5%)
Query: 51 EPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWN 110
EPN ++ I KA AK S + HI A ++FDE+ D S+N
Sbjct: 71 EPNVFSYNVIVKAYAKDSKI--------HI-------------ARQLFDEIPQPDTVSYN 109
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHI 170
++ G+A + LF MR +G + D T+ GL A + L+K +H F +
Sbjct: 110 TLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSG 167
Query: 171 GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLN 230
G D+ SV N +++ Y+K L+ A VF G++E LR VSWNSM+ + +L
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE-LRDEVSWNSMIVAYGQHKEGAKALA 226
Query: 231 FYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYS 290
Y+ M++ GF++D+ T+ S+L++ + L+ GR H I GF + V + LI YS
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYS 286
Query: 291 KCGDIDS---ARVLFDGICDRTRVSWTAMISGYAQKGDL-DEALRLFFAMEAAGELPDLV 346
KCG D + +F I V W MISGY+ +L +EA++ F M+ G PD
Sbjct: 287 KCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDC 346
Query: 347 TVLSMISGCGQSGALELGKWFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYA 405
+ + + S C + K A + N + V NALI +Y K G++ DAR +F
Sbjct: 347 SFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR 406
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+PE VS+ MI G A +G EAL L+ ++++ + PN++TF+AVL AC H G +++G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+ PE +HYSCM DLLGR GKL+EA F+ +MP K + W LL A
Sbjct: 467 Q--EYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Query: 526 CKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFP 585
C+ H N+ + E A L ++P +A PYV +AN YA +W+ +A++R M+ +++K P
Sbjct: 525 CRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKP 584
Query: 586 GQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKW 634
G S + K F AED H L+ + ++ Y KW
Sbjct: 585 GCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKW 633
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 207/454 (45%), Gaps = 33/454 (7%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+ I + T++ +N+ I + E ++LF++M++ E + T + AC D
Sbjct: 97 FDEIPQPDTVS-YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVD 155
Query: 70 LIYSQMIHGHIVKSPFVKCDRLDCAYKIF-----------------DEMAVRDVASWNAM 112
LI + +H V F ++ A+ + DE+ RD SWN+M
Sbjct: 156 LI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL--RDEVSWNSM 211
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGV 172
+V + Q L L+ M G + D T+ + A HL + H I G
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 173 DADVSVCNTWISSYAK---CDDLKMAELVFCGIEERLRT-VVSWNSMVAGCTYGDKF-DD 227
+ V + I Y+K CD + +E VF +E L +V WN+M++G + ++ ++
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVF---QEILSPDLVVWNTMISGYSMNEELSEE 328
Query: 228 SLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD-VSVINTLI 286
++ +R M G R D + V + S+ + Q + +H I + +SV N LI
Sbjct: 329 AVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALI 388
Query: 287 SMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLV 346
S+Y K G++ AR +FD + + VS+ MI GYAQ G EAL L+ M +G P+ +
Sbjct: 389 SLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKI 448
Query: 347 TVLSMISGCGQSGALELGK-WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
T ++++S C G ++ G+ +F+ + ++ + +ID+ + G + +A A
Sbjct: 449 TFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDA 508
Query: 406 LPEKI-VVSWTTMIAGCALNGEFVEALDLFHQLM 438
+P K V+W ++ C + A ++LM
Sbjct: 509 MPYKPGSVAWAALLGACRKHKNMALAERAANELM 542
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 158/352 (44%), Gaps = 36/352 (10%)
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
F T L ++ + L KS+H+ + V + + N +++ Y+KC L A F
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 201 GIEE-----------------------------RLRTVVSWNSMVAGCTYGDKFDDSLNF 231
EE VS+N++++G + ++
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 232 YRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
++ M GF +D T+ L+++ C + + + +H + GFD SV N ++ YSK
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 292 CGDIDSARVLFDGICD-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
G + A +F G+ + R VSW +MI Y Q + +AL L+ M G D+ T+ S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 351 MISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCG---SIGDARELFYALP 407
+++ L G+ F G N V + LID YSKCG + D+ ++F +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 408 EKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRPNRVTFLAVLQACTH 458
+V W TMI+G ++N E EA+ F Q+ + RP+ +F+ V AC++
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 311/608 (51%), Gaps = 31/608 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIE----PNNLTFPFIAKACAKLSDLIYSQMIH 77
WNS IR + + ++ LL +M + + + P+ T + CA+ ++ + +H
Sbjct: 256 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 315
Query: 78 GHIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE 123
G VK + KC + A IF ++V SWN M+ GF+ G
Sbjct: 316 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 375
Query: 124 NVLRLFYNMRLVG--IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
+ M G ++AD VT++ H L LK +H + + + V N
Sbjct: 376 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 435
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
+++SYAKC L A+ VF GI R +TV SWN+++ G + SL+ + M +G
Sbjct: 436 FVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
D TV SLLS+ ++L G+ VH I + D+ V +++S+Y CG++ + + L
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + D++ VSW +I+GY Q G D AL +F M G ++++ + C +L
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
LG+ YA L+D+ + +LIDMY+K GSI + ++F L EK SW MI G
Sbjct: 614 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 673
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDK---GI 478
++G EA+ LF ++ P+ +TFL VL AC H+G + +G ++Y D+
Sbjct: 674 GIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG-----LRYLDQMKSSF 728
Query: 479 SYNPELDHYSCMADLLGRKGKLKEALDFV-QSMPIKSDAGIWGTLLCACKIHLNIEIGEY 537
P L HY+C+ D+LGR G+L +AL V + M ++D GIW +LL +C+IH N+E+GE
Sbjct: 729 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 788
Query: 538 VAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTC 597
VA LF+LEP YV ++N YA G+W+ V +R M ++K G S +N K
Sbjct: 789 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 848
Query: 598 TFTAEDRY 605
+F +R+
Sbjct: 849 SFVVGERF 856
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/542 (26%), Positives = 253/542 (46%), Gaps = 39/542 (7%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLL--LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIY 72
RS + QWN+ I + ++NE + +L + D+ P++ T+P + KACA +SD+
Sbjct: 147 RSKNLFQWNAVI-SSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 73 SQMIHGHIVKSPFVK--------------CDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+HG +VK+ V+ + A ++FD M R++ SWN+M+ F+
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 119 MGFLENVLRLFYNMRLV----GIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
GF E L M D T++ + + + L K VH + + + +D
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
++ + N + Y+KC + A+++F + VVSWN+MV G + + + R
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIF--KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 235 MMYNGFRLDVTTVVSLLSSFVC--PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKC 292
M+ G + V L + VC L + +H + + F + V N ++ Y+KC
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 293 GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMI 352
G + A+ +F GI +T SW A+I G+AQ D +L M+ +G LPD TV S++
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 353 SGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVV 412
S C + +L LGK + L+ ++ V +++ +Y CG + + LF A+ +K +V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 413 SWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-----WA 467
SW T+I G NG AL +F Q++ ++ ++ + V AC+ L G +A
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ + DD I+ + + D+ + G + ++ + KS A W ++
Sbjct: 624 LKHLLEDDAFIACS--------LIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYG 674
Query: 528 IH 529
IH
Sbjct: 675 IH 676
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 218/464 (46%), Gaps = 22/464 (4%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQM--KQNDIEPNNLTFPFIAKACAKLSD 69
++ + + WN+ + + + H T + RQM D++ + +T C S
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +H + +K FV KC L A ++F + + V SWNA++ G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
AQ L M++ G+ D TV L A K L L K VH F I ++ D
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
+ V + +S Y C +L + +F +E++ ++VSWN+++ G D +L +R M
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDK--SLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G +L +++ + + +L GR H++ + + + D + +LI MY+K G I
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 648
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ +F+G+ +++ SW AMI GY G EA++LF M+ G PD +T L +++ C
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Query: 356 GQSGALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA-RELFYALPEKIVVS 413
SG + G ++ D S GLK N+ +IDM + G + A R + + E+ V
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 414 -WTTMIAGCALNGEFVEALDLFHQLMELDL-RPNRVTFLAVLQA 455
W ++++ C ++ + +L EL+ +P L+ L A
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 204/448 (45%), Gaps = 23/448 (5%)
Query: 26 IREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA-KLSDLIYSQMIHGHIVKSP 84
+REA+ LLL K+ DIE ++ + + D++ +++I +
Sbjct: 83 VREALG-------LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRII------TM 129
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNM-RLVGIQADFVT 143
+ C D + +FD + +++ WNA++ +++ + VL F M + D T
Sbjct: 130 YAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFT 189
Query: 144 VMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIE 203
+ +A + + +VH + G+ DV V N +S Y + A +F +
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
Query: 204 ERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM-YNG---FRLDVTTVVSLLSSFVCPEA 259
E R +VSWNSM+ + ++S MM NG F DV T+V++L
Sbjct: 250 E--RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 260 LVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISG 319
+ G+ VH + D ++ + N L+ MYSKCG I +A+++F ++ VSW M+ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 320 YAQKGDLDEALRLFFAMEAAGE--LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK 377
++ +GD + M A GE D VT+L+ + C L K Y+
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N +V NA + Y+KCGS+ A+ +F+ + K V SW +I G A + + +LD Q+
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKG 465
L P+ T ++L AC+ L G
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLG 515
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 285 LISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGE-LP 343
+I+MY+ CG D +R +FD + + W A+IS Y++ DE L F M + + LP
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
D T +I C + +G GL ++V V NAL+ Y G + DA +LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD----LRPNRVTFLAVLQACTHT 459
+PE+ +VSW +MI + NG E+ L ++ME + P+ T + VL C
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 460 -----GFLEKGWAISIIQYDDKGISYNPELDHYS 488
G GWA+ ++ D + + N +D YS
Sbjct: 306 REIGLGKGVHGWAVK-LRLDKELVLNNALMDMYS 338
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS------MISGCGQSGALELGKWFDNY 370
IS + + GDLD++ R E +L ++ G+ +E+G+
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 371 AC-SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVE 429
S L+++ ++C +I MY+ CGS D+R +F AL K + W +I+ + N + E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 430 ALDLFHQLME-LDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
L+ F +++ DL P+ T+ V++AC + G A+
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 319/646 (49%), Gaps = 36/646 (5%)
Query: 15 RSSTINQ--WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKL---SD 69
R S NQ WNS I + + L FR M ++EP++ T + AC+ L
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 70 LIYSQMIHGHIVK-------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
L+ + +H + ++ + + K +L + + RD+ +WN +L
Sbjct: 218 LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIG-VDAD 175
Q L L M L G++ D T+ + A H + L K +H++ + G +D +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V + + Y C + VF G+ +R + WN+M+AG + + ++L + M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDR--KIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 236 MYN-GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
+ G + TT+ ++ + V A + +H + G D D V NTL+ MYS+ G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAME--------AAGEL---P 343
ID A +F + DR V+W MI+GY ++AL L M+ A + P
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
+ +T+++++ C AL GK YA L +V V +AL+DMY+KCG + +R++F
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+P+K V++W +I ++G EA+DL +M ++PN VTF++V AC+H+G ++
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK-SDAGIWGTL 522
+G I + D G+ P DHY+C+ DLLGR G++KEA + MP + AG W +L
Sbjct: 636 EGLRIFYVMKPDYGV--EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 523 LCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVK 582
L A +IH N+EIGE A L +LEP+ A+ YV +AN Y+ G WD +R MK V+
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 583 KFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
K PG S + F A D H +SE L+ L R+E Y
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 259/561 (46%), Gaps = 40/561 (7%)
Query: 2 AVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIA 61
AVS P I +S + W +R V N + +L + M I+P+N FP +
Sbjct: 47 AVSGAPSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALL 104
Query: 62 KACAKLSDLIYSQMIHGHIVK---------------SPFVKCDRLDCAYKIFDEMAVRDV 106
KA A L D+ + IH H+ K + + KC YK+FD ++ R+
Sbjct: 105 KAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ 164
Query: 107 ASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH---AKHLSLLKSV 163
SWN+++ E L F M ++ T++ + A + + L + K V
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGD 223
H++G+ G + + + NT ++ Y K L ++++ R +V+WN++++ +
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVTWNTVLSSLCQNE 281
Query: 224 KFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYG-FDLDVSVI 282
+ ++L + R M+ G D T+ S+L + E L G+ +H++ + G D + V
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM-EAAGE 341
+ L+ MY C + S R +FDG+ DR W AMI+GY+Q EAL LF M E+AG
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 342 LPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARE 401
L + T+ ++ C +SGA + + GL + V N L+DMYS+ G I A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 402 LFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD-----------LRPNRVTFL 450
+F + ++ +V+W TMI G + +AL L H++ L+ L+PN +T +
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
+L +C L KG I + + ++ S + D+ + G L+ + +
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKN---NLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 511 PIKSDAGIWGTLLCACKIHLN 531
P K + W ++ A +H N
Sbjct: 579 PQK-NVITWNVIIMAYGMHGN 598
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/592 (31%), Positives = 310/592 (52%), Gaps = 21/592 (3%)
Query: 40 LLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK--------------SPF 85
L R + ++P+ TFP + + C + DL + +H H+V+ + +
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
VKC + A +FD M RD+ SWNAM+ G+ + G L LF+ MR + + D +T+
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ A L + +H++ I G D+SVCN+ Y + AE +F +E +
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+VSW +M++G Y D +++ YR M + + D TV ++LS+ L G
Sbjct: 362 --DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 266 VHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGD 325
+H I V V N LI+MYSKC ID A +F I + +SWT++I+G
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR 479
Query: 326 LDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
EAL M+ + P+ +T+ + ++ C + GAL GK + G+ + + NA
Sbjct: 480 CFEALIFLRQMKMTLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY +CG + A F + +K V SW ++ G + G+ ++LF ++++ +RP+
Sbjct: 539 LLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TF+++L C+ + + +G + + +D G++ P L HY+C+ DLLGR G+L+EA
Sbjct: 598 EITFISLLCGCSKSQMVRQG-LMYFSKMEDYGVT--PNLKHYACVVDLLGRAGELQEAHK 654
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
F+Q MP+ D +WG LL AC+IH I++GE A +F+L+ S Y+ + N YA G+
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGK 714
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLD 617
W VA +R MMK N + G S + GK F ++D+YH +++ VL+
Sbjct: 715 WREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 221/426 (51%), Gaps = 23/426 (5%)
Query: 113 LVGFAQMGFLENVLRLFYNMRLVGIQAD---FVTVMGLTQAAIHAKHLS-----LLKSVH 164
L G G LE ++L +M+ + + D FV ++ L + + S L S+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
S G+ +G N +++ + + +L A VF + ER + SWN +V G
Sbjct: 126 SLGVELG--------NAFLAMFVRFGNLVDAWYVFGKMSER--NLFSWNVLVGGYAKQGY 175
Query: 225 FDDSLNFYRHMMY-NGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN 283
FD+++ Y M++ G + DV T +L + L +G+ VH H + YG++LD+ V+N
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 284 TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELP 343
LI+MY KCGD+ SAR+LFD + R +SW AMISGY + G E L LFFAM P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 344 DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELF 403
DL+T+ S+IS C G LG+ Y + G ++ VCN+L MY GS +A +LF
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 404 YALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLE 463
+ K +VSWTTMI+G N +A+D + + + ++P+ +T AVL AC G L+
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 464 KGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLL 523
G + + + ISY ++ + ++ + + +ALD ++P K+ W +++
Sbjct: 416 TGVELHKLAIKARLISYVIVANN---LINMYSKCKCIDKALDIFHNIPRKNVIS-WTSII 471
Query: 524 CACKIH 529
+++
Sbjct: 472 AGLRLN 477
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 194/369 (52%), Gaps = 4/369 (1%)
Query: 78 GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV-G 136
G+ + FV+ L A+ +F +M+ R++ SWN ++ G+A+ G+ + + L++ M V G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ D T + + L+ K VH + G + D+ V N I+ Y KC D+K A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
L+F + R ++SWN+M++G + L + M D+ T+ S++S+
Sbjct: 252 LLFDRMPR--RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 257 PEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAM 316
GR +H++ I GF +D+SV N+L MY G A LF + + VSWT M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 317 ISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGL 376
ISGY D+A+ + M+ PD +TV +++S C G L+ G A L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
V+V N LI+MYSKC I A ++F+ +P K V+SWT++IAG LN EAL +F +
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLR 488
Query: 437 LMELDLRPN 445
M++ L+PN
Sbjct: 489 QMKMTLQPN 497
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 277/523 (52%), Gaps = 10/523 (1%)
Query: 102 AVRDVAS--WNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSL 159
AV VAS WN L A + L+ +M G D + + ++ LSL
Sbjct: 12 AVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSC---ASLSL 68
Query: 160 LKSVHSFGIHI---GVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
S H+ G + + V IS Y KC + A VF + + V +N+++
Sbjct: 69 PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+G T K D+ +R M G +D T++ L+ PE L GR +H + G D
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+V+V+N+ I+MY KCG +++ R LFD + + ++W A+ISGY+Q G + L L+ M
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+++G PD T++S++S C GA ++G S G NV V NA I MY++CG++
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
AR +F +P K +VSWT MI ++G L LF +++ +RP+ F+ VL AC
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+H+G +KG + + + + P +HYSC+ DLLGR G+L EA++F++SMP++ D
Sbjct: 369 SHSGLTDKG--LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
+WG LL ACKIH N+++ E + + EP++ YV M+N Y+ +G+ IR MM
Sbjct: 427 AVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+ +K PG S G+ F A DR H ++E + +LD L
Sbjct: 487 RERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 234/478 (48%), Gaps = 35/478 (7%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN ++RE ++ +++ L+R M ++ P+ +FPFI K+CA LS + Q +H H+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 82 K-----SPFV---------KCDRLDCAYKIFDEMAVRDVAS--WNAMLVGFAQMGFLENV 125
K PFV KC + A K+F+E S +NA++ G+ + +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+F M+ G+ D VT++GL ++L L +S+H + G+D++V+V N++I+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y KC ++ +F E ++ +++WN++++G + D L Y M +G D
Sbjct: 201 YMKCGSVEAGRRLF--DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 246 TVVSLLSSFVCPEALVQ------GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
T+VS+LSS C + G+LV S+ GF +V V N ISMY++CG++ AR
Sbjct: 259 TLVSVLSS--CAHLGAKKIGHEVGKLVESN----GFVPNVFVSNASISMYARCGNLAKAR 312
Query: 300 VLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSG 359
+FD + ++ VSWTAMI Y G + L LF M G PD + ++S C SG
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Query: 360 ALELG-KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP-EKIVVSWTTM 417
+ G + F L+ + L+D+ + G + +A E ++P E W +
Sbjct: 373 LTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYD 474
+ C ++ A F +++E + PN + + ++ ++G W I ++ +
Sbjct: 433 LGACKIHKNVDMAELAFAKVIEFE--PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/623 (30%), Positives = 317/623 (50%), Gaps = 23/623 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS I + + L ++ ++K + I P++ T + A L + Q +HG +
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + ++K R A ++FDEM VRD S+N M+ G+ ++ +E +R
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR 294
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
+F L + D +TV + +A H + LSL K ++++ + G + +V N I YA
Sbjct: 295 MFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA 353
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC D+ A VF +E + VSWNS+++G +++ ++ MM + D T
Sbjct: 354 KCGDMITARDVFNSME--CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ L+S L G+ +HS+GI G +D+SV N LI MY+KCG++ + +F +
Sbjct: 412 LMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT 471
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
V+W +IS + GD L++ M + +PD+ T L + C A LGK
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEF 427
G + + + NALI+MYSKCG + ++ +F + + VV+WT MI + GE
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEG 591
Query: 428 VEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISY--NPELD 485
+AL+ F + + + P+ V F+A++ AC+H+G +++G A ++ Y +P ++
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLAC----FEKMKTHYKIDPMIE 647
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
HY+C+ DLL R K+ +A +F+Q+MPIK DA IW ++L AC+ ++E E V+ + +L
Sbjct: 648 HYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
P + +N YA +WD V+ IR +K + K PG S + F++ D
Sbjct: 708 NPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDS 767
Query: 606 HAESELTYPVLDCLALHSREEAY 628
+SE Y L+ L +E Y
Sbjct: 768 APQSEAIYKSLEILYSLMAKEGY 790
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 244/461 (52%), Gaps = 17/461 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA---- 65
R+ + + WNS IR + L + +++++ + P+ TFP + KACA
Sbjct: 62 FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFD 121
Query: 66 -KLSDLIYSQMIH---------GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
++ DL+Y Q++ G+ + + + L A ++FDEM VRD+ SWN+++ G
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
++ G+ E L +++ ++ I D TV + A + + + +H F + GV++
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSV 241
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
V V N ++ Y K A VF E +R VS+N+M+ G + ++S+ +
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVF--DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ + F+ D+ TV S+L + L + ++++ + GF L+ +V N LI +Y+KCGD+
Sbjct: 300 L-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+AR +F+ + + VSW ++ISGY Q GDL EA++LF M E D +T L +IS
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+ L+ GK + G+ ++ V NALIDMY+KCG +GD+ ++F ++ V+W
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
T+I+ C G+F L + Q+ + ++ P+ TFL L C
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 183/378 (48%), Gaps = 8/378 (2%)
Query: 147 LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERL 206
+++A + +L+ L+ +H+ I +G+D+ I Y+ + + VF +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP-A 68
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+ V WNS++ + F ++L FY + + D T S++ + G LV
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
+ + GF+ D+ V N L+ MYS+ G + AR +FD + R VSW ++ISGY+ G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
+EAL ++ ++ + +PD TV S++ G ++ G+ +A G+ V+V N L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV-EALDLFHQLMELDLRPN 445
+ MY K DAR +F + + VS+ TMI G L E V E++ +F + ++ +P+
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG-YLKLEMVEESVRMFLENLD-QFKPD 306
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+T +VL+AC H + A I Y K + E + + D+ + G + A D
Sbjct: 307 LLTVSSVLRACGH--LRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARD 363
Query: 506 FVQSMPIKSDAGIWGTLL 523
SM K D W +++
Sbjct: 364 VFNSMECK-DTVSWNSII 380
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 291/582 (50%), Gaps = 20/582 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W +R E+ + + L+ + ++ +++ F KAC +L DL + IH +V
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 82 KSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
K P + KC + A+K+F+++ +R+V W +M+ G+ + E L L
Sbjct: 170 KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
F MR + + T L A L K H + G++ + + + Y K
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
C D+ A VF E +V W +M+ G T+ +++L+ ++ M + + T+
Sbjct: 290 CGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIA 347
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+LS E L GR VH I G D +V N L+ MY+KC A+ +F+ ++
Sbjct: 348 SVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
V+W ++ISG++Q G + EAL LF M + P+ VTV S+ S C G+L +G
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 369 NYACSGGL--KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
Y+ G +V V AL+D Y+KCG AR +F + EK ++W+ MI G G+
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDH 486
+ +L+LF ++++ +PN TF ++L AC HTG + +G Y D ++ P H
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKD--YNFTPSTKH 584
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLE 546
Y+CM D+L R G+L++ALD ++ MPI+ D +G L C +H ++GE V + L
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 644
Query: 547 PHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
P A+ YV ++N YA GRW+ +R +MK+ + K G S
Sbjct: 645 PDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 184/372 (49%), Gaps = 4/372 (1%)
Query: 97 IFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKH 156
+FD++ D W ML + V++L+ + G + D + +A +
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD 157
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L K +H + + D V + YAKC ++K A VF I LR VV W SM+
Sbjct: 158 LDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT--LRNVVCWTSMI 214
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
AG D ++ L + M N + T +L+ + AL QG+ H + G +
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
L ++ +L+ MY KCGDI +AR +F+ V WTAMI GY G ++EAL LF M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ P+ VT+ S++SGCG LELG+ + G+ D V NAL+ MY+KC
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQN 393
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
DA+ +F EK +V+W ++I+G + NG EAL LFH++ + PN VT ++ AC
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Query: 457 THTGFLEKGWAI 468
G L G ++
Sbjct: 454 ASLGSLAVGSSL 465
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 145/309 (46%), Gaps = 3/309 (0%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
L+ H G+ D+S+ +S Y K A LVF I E W M+
Sbjct: 60 LRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP--DFYLWKVMLRCY 117
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
+ + + Y +M +GFR D L + + L G+ +H + D
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDN 176
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAA 339
V+ L+ MY+KCG+I SA +F+ I R V WT+MI+GY + +E L LF M
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 340 GELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
L + T ++I C + AL GKWF G++ + + +L+DMY KCG I +A
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
Query: 400 RELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHT 459
R +F +V WT MI G NG EAL LF ++ ++++PN VT +VL C
Sbjct: 297 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 460 GFLEKGWAI 468
LE G ++
Sbjct: 357 ENLELGRSV 365
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 306 bits (783), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/640 (28%), Positives = 323/640 (50%), Gaps = 30/640 (4%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + W + I + + L LF +M+ +PN+ TF A+
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 75 MIHGHIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
+H +VK+ ++KC + A +FD+ V+ V +WN+M+ G+A G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
L +FY+MRL ++ + + + + K L + +H + G D ++
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 181 TWISSYAKC----DDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+ +Y+KC D L++ + + C + VVSW +M++G D +++++ + M
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGC-----VGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
G R + T +L++ ++ VH+ + ++ +V L+ Y K G ++
Sbjct: 390 RKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCG 356
A +F GI D+ V+W+AM++GYAQ G+ + A+++F + G P+ T S+++ C
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 357 QSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+ A + GK F +A L ++ V +AL+ MY+K G+I A E+F EK +VSW
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD 475
+MI+G A +G+ ++ALD+F ++ + ++ + VTF+ V ACTH G +E+G I D
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 476 KGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIG 535
I+ P +H SCM DL R G+L++A+ +++MP + + IW T+L AC++H E+G
Sbjct: 626 CKIA--PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 536 EYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGK 595
A + ++P +A YV ++N YA G W A +R +M VKK PG S + K
Sbjct: 684 RLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 743
Query: 596 TCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLKWI 635
T +F A DR H + Y L+ L+ ++ Y ++
Sbjct: 744 TYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV 783
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 235/515 (45%), Gaps = 46/515 (8%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSPFV-------------- 86
LF + + +E + F + K A L D ++ + +H +K F+
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 139
Query: 87 KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD---FVT 143
K K+FDEM R+V +W ++ G+A+ + VL LF M+ G Q + F
Sbjct: 140 KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA 199
Query: 144 VMG-LTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+G L + + + L VH+ + G+D + V N+ I+ Y KC +++ A ++F
Sbjct: 200 ALGVLAEEGVGGRGL----QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT 255
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E +++VV+WNSM++G ++L + M N RL ++ S++ + L
Sbjct: 256 E--VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI-CDRTRVSWTAMISGYA 321
+H + YGF D ++ L+ YSKC + A LF I C VSWTAMISG+
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF--DNYACSGGLKDN 379
Q +EA+ LF M+ G P+ T +++ E+ NY S
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS----- 428
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
V AL+D Y K G + +A ++F + +K +V+W+ M+AG A GE A+ +F +L +
Sbjct: 429 -TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDD-KGISYNPELDHYSCMADLL---- 494
++PN TF ++L C T S+ Q G + LD C++ L
Sbjct: 488 GGIKPNEFTFSSILNVCAATN-------ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+KG ++ A + + K D W +++ H
Sbjct: 541 AKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 180/373 (48%), Gaps = 7/373 (1%)
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
V RL A+ +FD+ RD S+ ++L GF++ G + RLF N+ +G++ D
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ + + + +H I G DVSV + + +Y K + K VF ++E
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE- 156
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGR- 264
R VV+W ++++G D+ L + M G + + T + L V E V GR
Sbjct: 157 -RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG--VLAEEGVGGRG 213
Query: 265 -LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQK 323
VH+ + G D + V N+LI++Y KCG++ AR+LFD ++ V+W +MISGYA
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 324 GDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVC 383
G EAL +F++M + S+I C L + G + +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 384 NALIDMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
AL+ YSKC ++ DA LF + VVSWT MI+G N EA+DLF ++ +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 443 RPNRVTFLAVLQA 455
RPN T+ +L A
Sbjct: 394 RPNEFTYSVILTA 406
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 130/254 (51%), Gaps = 4/254 (1%)
Query: 207 RTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLL--SSFVCPEALVQGR 264
R S+ S++ G + + ++ + ++ G +D + S+L S+ +C E GR
Sbjct: 56 RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF--GR 113
Query: 265 LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
+H I +GF DVSV +L+ Y K + R +FD + +R V+WT +ISGYA+
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
DE L LF M+ G P+ T + + + G G GL + V N
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+LI++Y KCG++ AR LF K VV+W +MI+G A NG +EAL +F+ + +R
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 445 NRVTFLAVLQACTH 458
+ +F +V++ C +
Sbjct: 294 SESSFASVIKLCAN 307
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 7/185 (3%)
Query: 293 GDIDSARV-----LFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
G + S+R+ LFD R R S+ +++ G+++ G EA RLF + G D +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD-CS 94
Query: 348 VLSMISGCGQSGALEL-GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL 406
+ S + + EL G+ G D+V V +L+D Y K + D R++F +
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 407 PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGW 466
E+ VV+WTT+I+G A N E L LF ++ +PN TF A L G +G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 467 AISII 471
+ +
Sbjct: 215 QVHTV 219
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 306 bits (783), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 198/630 (31%), Positives = 306/630 (48%), Gaps = 63/630 (10%)
Query: 64 CAKLSD--LIYSQMIHGHI-----VKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
C L D ++ +M +I V + K LD A +F M RD +WN+M+ GF
Sbjct: 68 CGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGF 127
Query: 117 AQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
AQ E L F M G + + + A ++ VHS +DV
Sbjct: 128 AQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDV 187
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
+ + + Y+KC ++ A+ VF + +R VVSWNS++ ++L+ ++ M+
Sbjct: 188 YIGSALVDMYSKCGNVNDAQRVFDEMGDR--NVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI-HYGFDLDVSVINTLISMYSKCGDI 295
+ D T+ S++S+ A+ G+ VH + + D+ + N + MY+KC I
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 296 DSARVLFDGI-------------------------------CDRTRVSWTAMISGYAQKG 324
AR +FD + +R VSW A+I+GY Q G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLK------D 378
+ +EAL LF ++ P + +++ C L LG + G K D
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
++ V N+LIDMY KCG + + +F + E+ VSW MI G A NG EAL+LF +++
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
E +P+ +T + VL AC H GF+E+G D G++ P DHY+CM DLLGR G
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA--PLRDHYTCMVDLLGRAG 543
Query: 499 KLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMAN 558
L+EA ++ MP++ D+ IWG+LL ACK+H NI +G+YVA L ++EP ++ PYV ++N
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603
Query: 559 KYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDC 618
YA G+W+ V N+R M++ V K PG S I G F +D+ H + + +LD
Sbjct: 604 MYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDI 663
Query: 619 L--------------ALHSREEAYSSHLKW 634
L +L S E YSS+L W
Sbjct: 664 LIAEMRPEQDHTEIGSLSSEEMDYSSNLLW 693
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 218/475 (45%), Gaps = 58/475 (12%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + + L F M + N +F + AC+ L+D+ +H I
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KSPF+ KC ++ A ++FDEM R+V SWN+++ F Q G L
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISSY 186
+F M ++ D VT+ + A + + + VH + + + D+ + N ++ Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 187 AKCDDLKMAELVFCGIEER-----------------------------LRTVVSWNSMVA 217
AKC +K A +F + R R VVSWN+++A
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 218 GCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL 277
G T + +++L+ + + + ++L + L G H H + +GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 278 ------DVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
D+ V N+LI MY KCG ++ ++F + +R VSW AMI G+AQ G +EAL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGK-WFDNYACSGG---LKDNVMVCNALI 387
LF M +GE PD +T++ ++S CG +G +E G+ +F + G L+D+ ++
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY---TCMV 536
Query: 388 DMYSKCGSIGDARELFYALP-EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
D+ + G + +A+ + +P + V W +++A C ++ + +L+E++
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 591
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 305 bits (782), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 307/617 (49%), Gaps = 24/617 (3%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQND--IEPNNLTFPFIAKACAKLSDLIYSQMI 76
I W S I+ V N + + L+LF M+ D + P+ + KAC + S++ Y + +
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 77 HGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFL 122
H + VK+ + + ++D + ++F EM R+ +W A++ G G
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 123 ENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTW 182
+ L F M +D T +A + + K++H+ I G + V N+
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 183 ISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRL 242
+ Y +C +++ +F + ER VVSW S++ + ++ + M +
Sbjct: 251 ATMYTECGEMQDGLCLFENMSER--DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 243 DVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLF 302
+ T S+ S+ LV G +H + + G + +SV N+++ MYS CG++ SA VLF
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 303 DGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
G+ R +SW+ +I GY Q G +E + F M +G P + S++S G +E
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ A GL+ N V ++LI+MYSKCGSI +A +F +VS T MI G A
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN- 481
+G+ EA+DLF + +++ RP+ VTF++VL ACTH+G L+ G+ ++ +YN
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHY----FNMMQETYNM 544
Query: 482 -PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P +HY CM DLL R G+L +A + M K D +W TLL ACK +IE G A
Sbjct: 545 RPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAE 604
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFT 600
+ +L+P A V +AN Y+ G + AN+R MK V K PG S I F
Sbjct: 605 RILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFV 664
Query: 601 AEDRYHAESELTYPVLD 617
+ DR+H +SE Y +L+
Sbjct: 665 SGDRFHPQSEDIYNILE 681
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 216/484 (44%), Gaps = 35/484 (7%)
Query: 85 FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLV--GIQADFV 142
+ L A ++FD+M D+ SW +++ + + L LF MR+V + D
Sbjct: 50 LINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTS 109
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
+ + +A + +++ +S+H++ + + + V V ++ + Y + + + VF
Sbjct: 110 VLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFS-- 167
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
E R V+W +++ G + ++ + L ++ M + D T L + +
Sbjct: 168 EMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKY 227
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H+H I GF + V N+L +MY++CG++ LF+ + +R VSWT++I Y +
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +A+ F M + P+ T SM S C L G+ S GL D++ V
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSV 347
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N+++ MYS CG++ A LF + + ++SW+T+I G G E F + +
Sbjct: 348 SNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT 407
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAI-----------------SIIQYDDK--------- 476
+P ++L + +E G + S+I K
Sbjct: 408 KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASM 467
Query: 477 --GISYNPELDHYSCMADLLGRKGKLKEALD-FVQSMPI--KSDAGIWGTLLCACKIHLN 531
G + ++ + M + GK KEA+D F +S+ + + D+ + ++L AC
Sbjct: 468 IFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQ 527
Query: 532 IEIG 535
+++G
Sbjct: 528 LDLG 531
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
TT +SLL V E +V+ S+ + FD + S + +LI+ G++ +AR +FD
Sbjct: 16 TTSISLLQKPV-EENIVR----ISNQVMVKFDPN-SHLRSLIN----AGNLRAARQVFDK 65
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL--PDLVTVLSMISGCGQSGALE 362
+ VSWT++I Y + DEAL LF AM PD + ++ CGQS +
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ YA L +V V ++L+DMY + G I + +F +P + V+WT +I G
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
G + E L F ++ + + TF L+AC ++ G AI
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 196/641 (30%), Positives = 318/641 (49%), Gaps = 27/641 (4%)
Query: 22 WNSQI---REAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
WNS I + + ++ + LFR+M+ DI PN T I KA + L + H
Sbjct: 83 WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 79 HIVKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLE- 123
+VK + K ++ K+F M R+ +W+ M+ G+A G +E
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 124 --NVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNT 181
V LF + G +D+V L+ A ++ L + +H I G+ V++ N
Sbjct: 203 AIKVFNLFLREKEEGSDSDYVFTAVLSSLAA-TIYVGLGRQIHCITIKNGLLGFVALSNA 261
Query: 182 WISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFR 241
++ Y+KC+ L A +F +R ++W++MV G + + +++ + M G +
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDR--NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 242 LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVL 301
T+V +L++ L +G+ +HS + GF+ + L+ MY+K G + AR
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 302 FDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL 361
FD + +R WT++ISGY Q D +EAL L+ M+ AG +P+ T+ S++ C L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 362 ELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGC 421
ELGK + G V + +AL MYSKCGS+ D +F P K VVSW MI+G
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 422 ALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYN 481
+ NG+ EAL+LF +++ + P+ VTF+ ++ AC+H GF+E+GW + D G+ +
Sbjct: 500 SHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGL--D 557
Query: 482 PELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYC 541
P++DHY+CM DLL R G+LKEA +F++S I +W LL ACK H E+G Y
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEK 617
Query: 542 LFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTA 601
L L ++ YV+++ Y GR V + M+ N V K G S + + F
Sbjct: 618 LMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVV 677
Query: 602 EDRYHAESELTYPVLDCLALHSREEAYSSHL--KWIPEHEA 640
D H E T ++ ++ EE + + L ++ E E
Sbjct: 678 GDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEEG 718
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 223/439 (50%), Gaps = 23/439 (5%)
Query: 47 QNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVKSP--------------FVKCDRLD 92
Q ++ P+ T ++ +L+ + +HG I+++ + KC +L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 93 CAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN---VLRLFYNMRLVGIQADFVTVMGLTQ 149
A+ IF+ + +DV SWN+++ G++Q G + + V++LF MR I + T+ G+ +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 150 AAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTV 209
A + ++ + H+ + + D+ V + + Y K ++ VF + E R
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE--RNT 184
Query: 210 VSWNSMVAGCTYGDKFDDSL---NFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLV 266
+W++MV+G + ++++ N + G D ++LSS + GR +
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQI 243
Query: 267 HSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL 326
H I G V++ N L++MYSKC ++ A +FD DR ++W+AM++GY+Q G+
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 327 DEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNAL 386
EA++LF M +AG P T++ +++ C LE GK ++ G + ++ AL
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 387 IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNR 446
+DMY+K G + DAR+ F L E+ V WT++I+G N + EAL L+ ++ + PN
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 447 VTFLAVLQACTHTGFLEKG 465
T +VL+AC+ LE G
Sbjct: 424 PTMASVLKACSSLATLELG 442
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 5/233 (2%)
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
+T++ L+ LV GR VH I G + N L++ Y+KCG + A +F+
Sbjct: 14 TSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFN 73
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEA---LRLFFAMEAAGELPDLVTVLSMISGCGQSGA 360
I + VSW ++I+GY+Q G + + ++LF M A LP+ T+ + +
Sbjct: 74 AIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQS 133
Query: 361 LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAG 420
+G+ ++ V +L+ MY K G + D ++F +PE+ +W+TM++G
Sbjct: 134 STVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSG 193
Query: 421 CALNGEFVEALDLFHQLM--ELDLRPNRVTFLAVLQACTHTGFLEKGWAISII 471
A G EA+ +F+ + + + + F AVL + T ++ G I I
Sbjct: 194 YATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 195/630 (30%), Positives = 308/630 (48%), Gaps = 40/630 (6%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ I V N L F++M++ + + + + ++CA LS+L +H H +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
KS F KCD + A +FD + S+NAM+ G++Q L
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF+ + G+ D +++ G+ +A K LS ++ I + DV V N I Y
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC L A VF E R R VSWN+++A K ++L + M+ + D T
Sbjct: 429 KCQALAEAFRVF--DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
S+L + +L G +HS + G + SV +LI MYSKCG I+ A +
Sbjct: 487 GSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 308 RTRVS--------------------WTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVT 347
R VS W ++ISGY K ++A LF M G PD T
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 348 VLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALP 407
+++ C + LGK L+ +V +C+ L+DMYSKCG + D+R +F
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+ V+W MI G A +G+ EA+ LF +++ +++PN VTF+++L+AC H G ++KG
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 468 ISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACK 527
+ D G+ +P+L HYS M D+LG+ GK+K AL+ ++ MP ++D IW TLL C
Sbjct: 726 YFYMMKRDYGL--DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
Query: 528 IHL-NIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPG 586
IH N+E+ E L +L+P ++ Y ++N YA G W+ V+++R M+ ++KK PG
Sbjct: 784 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 843
Query: 587 QSLFHINGKTCTFTAEDRYHAESELTYPVL 616
S + + F D+ H E Y L
Sbjct: 844 CSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 214/440 (48%), Gaps = 17/440 (3%)
Query: 67 LSDLI-YSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENV 125
L D++ +++MI+G+ + K A F+ M VRDV SWN+ML G+ Q G
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFK------ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164
Query: 126 LRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISS 185
+ +F +M GI+ D T + + + SL +H + +G D DV + +
Sbjct: 165 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDM 224
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
YAK + VF GI E+ VSW++++AGC + +L F++ M + +
Sbjct: 225 YAKGKRFVESLRVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 282
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
S+L S L G +H+H + F D V + MY+KC ++ A++LFD
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 342
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ R S+ AMI+GY+Q+ +AL LF + ++G D +++ + C L G
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNG 425
A L +V V NA IDMY KC ++ +A +F + + VSW +IA NG
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 426 EFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNPE 483
+ E L LF ++ + P+ TF ++L+ACT G L G I SI++ G++ N
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK---SGMASNSS 518
Query: 484 LDHYSCMADLLGRKGKLKEA 503
+ + D+ + G ++EA
Sbjct: 519 VG--CSLIDMYSKCGMIEEA 536
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 239/545 (43%), Gaps = 47/545 (8%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WNS + + E+ K++ +F M + IE + TF I K C+ L D IHG +V
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 82 K--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + K R + ++F + ++ SW+A++ G Q L L+
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
F M+ V + ++ L L +H+ + AD V + YA
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KCD+++ A+++F E R S+N+M+ G + + +L + +M +G D ++
Sbjct: 328 KCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICD 307
+ + + L +G ++ I LDV V N I MY KC + A +FD +
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 308 RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWF 367
R VSW A+I+ + Q G E L LF +M + PD T S++ C G+L G
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEI 504
Query: 368 DNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL---FYALP----------------- 407
+ G+ N V +LIDMYSKCG I +A ++ F+
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 408 EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA 467
+++ VSW ++I+G + + +A LF ++ME+ + P++ T+ VL C + G
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Query: 468 ISIIQYDDKGISYNPELDHYSC--MADLLGRKGKLKEA-LDFVQSMPIKSDAGIWGTLLC 524
I + I + D Y C + D+ + G L ++ L F +S+ + D W ++C
Sbjct: 625 IHA-----QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL--RRDFVTWNAMIC 677
Query: 525 ACKIH 529
H
Sbjct: 678 GYAHH 682
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 44/269 (16%)
Query: 237 YNGFRLDVTTVVSLLSSFVCPE-----ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK 291
+ F V +V + SFV E AL G+ H+H I GF V+N L+ +Y+
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 292 CGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSM 351
D SA ++FD + R VSW MI+GY++ D+ +A F M + D+V+ SM
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMM----PVRDVVSWNSM 151
Query: 352 ISGCGQSG----ALEL-------GKWFDNYA-------CS-----------------GGL 376
+SG Q+G ++E+ G FD CS G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 377 KDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+V+ +AL+DMY+K ++ +F +PEK VSW+ +IAGC N AL F +
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 437 LMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ +++ ++ + +VL++C L G
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLG 300
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNAL---------------------------- 386
C + GALELGK + G + V N L
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 387 ---IDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLR 443
I+ YSK + A F +P + VVSW +M++G NGE ++++++F + +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 444 PNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEA 503
+ TF +L+ C+ FLE I + + ++ S + D+ + + E+
Sbjct: 178 FDGRTFAIILKVCS---FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 504 LDFVQSMPIKSDAGIWGTLLCAC 526
L Q +P K+ W ++ C
Sbjct: 235 LRVFQGIPEKNSVS-WSAIIAGC 256
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 295/599 (49%), Gaps = 49/599 (8%)
Query: 71 IYSQMIHGHIVKSPFV-----------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQM 119
I +QMI ++ PF + LD + KI + ++ SWN + GF++
Sbjct: 72 IQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSES 131
Query: 120 GFLENVLRLFYNMRLVGI---QADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV 176
+ L+ M G + D T L + + SL + + + ++
Sbjct: 132 ENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVS 191
Query: 177 SVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMM 236
V N I +A C D++ A VF E +R +VSWN ++ G + + ++ Y+ M
Sbjct: 192 HVHNASIHMFASCGDMENARKVF--DESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME 249
Query: 237 YNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDID 296
G + D T++ L+SS L +G+ + + G + + ++N L+ M+SKCGDI
Sbjct: 250 SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIH 309
Query: 297 SARVLFDGICDRTRVSWTAMISGYAQKGDLD----------------------------- 327
AR +FD + RT VSWT MISGYA+ G LD
Sbjct: 310 EARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKR 369
Query: 328 --EALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNA 385
+AL LF M+ + PD +T++ +S C Q GAL++G W Y L NV + +
Sbjct: 370 GQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTS 429
Query: 386 LIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPN 445
L+DMY+KCG+I +A +F+ + + +++T +I G AL+G+ A+ F+++++ + P+
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 446 RVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+TF+ +L AC H G ++ G + NP+L HYS M DLLGR G L+EA
Sbjct: 490 EITFIGLLSACCHGGMIQTGR--DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADR 547
Query: 506 FVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGR 565
++SMP+++DA +WG LL C++H N+E+GE A L +L+P + YV + Y
Sbjct: 548 LMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANM 607
Query: 566 WDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSR 624
W+ R MM V+K PG S +NG C F D+ ESE Y L CL H R
Sbjct: 608 WEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 314/643 (48%), Gaps = 46/643 (7%)
Query: 20 NQWNSQIREAVN---KNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMI 76
N ++ QI++ + +N++ ++ + + P + I A A + Y++ +
Sbjct: 4 NYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV 63
Query: 77 HGHIVKSPFVKCDRLDCAYK----------IFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
I + + L AY F+++ RD +WN ++ G++ G + +
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 127 RLFYNMRLVGIQADF--VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ YN + A+ VT+M + + + H+SL K +H I +G ++ + V + +
Sbjct: 124 KA-YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182
Query: 185 SYAKCDDLKMAELVFCGIEER----------------------------LRTVVSWNSMV 216
YA + A+ VF G+++R + VSW +M+
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMI 242
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
G +++ +R M G ++D S+L + A+ +G+ +H+ I F
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ V + LI MY KC + A+ +FD + + VSWTAM+ GY Q G +EA+++F M
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 337 EAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSI 396
+ +G PD T+ IS C +LE G F A + GL V V N+L+ +Y KCG I
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 397 GDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
D+ LF + + VSWT M++ A G VE + LF ++++ L+P+ VT V+ AC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 457 THTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDA 516
+ G +EKG + + GI P + HYSCM DL R G+L+EA+ F+ MP DA
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIV--PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA 540
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMM 576
W TLL AC+ N+EIG++ A L +L+PH A Y +++ YA G+WD VA +R M
Sbjct: 541 IGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGM 600
Query: 577 KRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCL 619
+ VKK PGQS GK +F+A+D + Y L+ L
Sbjct: 601 REKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEEL 643
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+ + W + + A + + +F M+++ I+P++ T ACA +S L
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
HG + S + KC +D + ++F+EM VRD SW AM+ +AQ G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
++LF M G++ D VT+ G+ A A
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 287/553 (51%), Gaps = 5/553 (0%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + KC +L A K+FDEM +RDV S N + GF + E+ L M G D
Sbjct: 98 SLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHA 156
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
T+ + + + K +H+ I G D ++SV N I+SY KC VF G+
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM 216
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
R V++ ++++G + +D L + M + T +S L++ + +V+
Sbjct: 217 SHR--NVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVE 274
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
G+ +H+ YG + ++ + + L+ MYSKCG I+ A +F+ + VS T ++ G AQ
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
G +EA++ F M AG D V +++ +L LGK + N V
Sbjct: 335 NGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV 394
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
N LI+MYSKCG + D++ +F +P++ VSW +MIA A +G + AL L+ ++ L++
Sbjct: 395 NNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV 454
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
+P VTFL++L AC+H G ++KG + + GI P +HY+C+ D+LGR G LKE
Sbjct: 455 KPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI--EPRTEHYTCIIDMLGRAGLLKE 512
Query: 503 ALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYAL 562
A F+ S+P+K D IW LL AC H + E+GEY A LF+ P S++ ++ +AN Y+
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSS 572
Query: 563 GGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALH 622
G+W A MK V K G S I KT +F ED+ H ++E Y VL L
Sbjct: 573 RGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPV 632
Query: 623 SREEAYSSHLKWI 635
+E Y ++I
Sbjct: 633 MVDEGYRPDKRFI 645
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 19/313 (6%)
Query: 32 KNEAHKT-LLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK-------- 82
+NE H+ L LF M++ + PN++T+ AC+ ++ Q IH + K
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 83 ------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVG 136
+ KC ++ A+ IF+ D S +LVG AQ G E ++ F M G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 137 IQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAE 196
++ D V + + L L K +HS I + V N I+ Y+KC DL ++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 197 LVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVC 256
VF + + R VSWNSM+A +L Y M + T +SLL +
Sbjct: 413 TVFRRMPK--RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSH 470
Query: 257 PEALVQGR-LVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVS-WT 314
+ +GR L++ +G + +I M + G + A+ D + + W
Sbjct: 471 VGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQ 530
Query: 315 AMISGYAQKGDLD 327
A++ + GD +
Sbjct: 531 ALLGACSFHGDTE 543
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 301 bits (772), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 187/548 (34%), Positives = 276/548 (50%), Gaps = 43/548 (7%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A K+FDE+ R+V N M+ + GF +++F M ++ D T + +A
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + + + +H +G+ + + V N +S Y KC L A LV E R VVSWN
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL--DEMSRRDVVSWN 210
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
S+V G +FDD+L R M D T+ SLL +
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-------------------- 250
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
VS T MY K +F + ++ VSW MI Y + EA+ L+
Sbjct: 251 -----VSNTTTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
MEA G PD V++ S++ CG + AL LGK Y L N+++ NALIDMY+KC
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR++F + + VVSWT MI+ +G +A+ LF +L + L P+ + F+ L
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G LE+G + + D I+ P L+H +CM DLLGR GK+KEA F+Q M ++
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKIT--PRLEHLACMVDLLGRAGKVKEAYRFIQDMSME 475
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
+ +WG LL AC++H + +IG A LF+L P + YV ++N YA GRW+ V NIR
Sbjct: 476 PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIR 535
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSHLK 633
+MK +KK PG S +N TF DR H +S+ Y LD L +E L
Sbjct: 536 NIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE------LG 589
Query: 634 WIPEHEAG 641
++P+ E+
Sbjct: 590 YVPDSESA 597
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 189/426 (44%), Gaps = 63/426 (14%)
Query: 23 NSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK 82
N IR VN + + +F M ++ P++ TFP + KAC+ ++ + IHG K
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 83 --------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRL 128
S + KC L A + DEM+ RDV SWN+++VG+AQ ++ L +
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 129 FYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAK 188
M V I D T+ L A VS T Y K
Sbjct: 229 CREMESVKISHDAGTMASLLPA-------------------------VSNTTTENVMYVK 263
Query: 189 CDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVV 248
KM + +++VSWN M+ +++ Y M +GF D ++
Sbjct: 264 DMFFKMGK----------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
S+L + AL G+ +H + ++ + N LI MY+KCG ++ AR +F+ + R
Sbjct: 314 SVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK--- 365
VSWTAMIS Y G +A+ LF ++ +G +PD + ++ ++ C +G LE G+
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 433
Query: 366 --WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYAL---PEKIVVSWTTMIAG 420
D+Y + L+ + C ++D+ + G + +A + P + V W ++
Sbjct: 434 KLMTDHYKITPRLEH--LAC--MVDLLGRAGKVKEAYRFIQDMSMEPNERV--WGALLGA 487
Query: 421 CALNGE 426
C ++ +
Sbjct: 488 CRVHSD 493
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 162/383 (42%), Gaps = 39/383 (10%)
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGI 202
TV L Q + L++VHS I + + S+ + +YA D+ A VF I
Sbjct: 41 TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100
Query: 203 EERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQ 262
ER V+ N M+ + + + + M R D T +L + C +V
Sbjct: 101 PER--NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVI 158
Query: 263 GRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
GR +H G + V N L+SMY KCG + AR++ D + R VSW +++ GYAQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMV 382
D+AL + ME+ D T+ S++ A S +NVM
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLP-----------------AVSNTTTENVMY 261
Query: 383 CNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDL 442
+++F+ + +K +VSW MI N VEA++L+ ++
Sbjct: 262 ----------------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF 305
Query: 443 RPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKE 502
P+ V+ +VL AC T L G I K I P L + + D+ + G L++
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI---PNLLLENALIDMYAKCGCLEK 362
Query: 503 ALDFVQSMPIKSDAGIWGTLLCA 525
A D ++M + D W ++ A
Sbjct: 363 ARDVFENMKSR-DVVSWTAMISA 384
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN I + + + L+ +M+ + EP+ ++ + AC S L + IHG+I
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 82 KSPFV--------------KCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ + KC L+ A +F+ M RDV SW AM+ + G + +
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHA 154
LF ++ G+ D + + A HA
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHA 423
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 318/621 (51%), Gaps = 24/621 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W++ + + E K L +F+ M + +EP+ +T + + CA+L L ++ +HG I
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
+ F KC L + +IF+++A ++ SW AM+ + + F E LR
Sbjct: 230 RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 289
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADV-SVCNTWISSY 186
F M GI+ + VT+ + + + KSVH F + +D + S+ + Y
Sbjct: 290 SFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A+C L E V + +R +V+WNS+++ + +L +R M+ + D T
Sbjct: 350 AECGKLSDCETVLRVVSDR--NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ S +S+ + G+ +H H I D V N+LI MYSK G +DSA +F+ I
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKW 366
R+ V+W +M+ G++Q G+ EA+ LF M + + VT L++I C G+LE GKW
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 367 FDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGE 426
+ GLKD + ALIDMY+KCG + A +F A+ + +VSW++MI ++G
Sbjct: 527 VHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGR 585
Query: 427 FVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAISIIQYDDKGISYNPELD 485
A+ F+Q++E +PN V F+ VL AC H+G +E+G + +++ K +P +
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM----KSFGVSPNSE 641
Query: 486 HYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL 545
H++C DLL R G LKEA ++ MP +DA +WG+L+ C+IH ++I + + L +
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDI 701
Query: 546 EPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY 605
Y ++N YA G W+ +R+ MK + +KK PG S I+ K F A +
Sbjct: 702 VTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEEN 761
Query: 606 HAESELTYPVLDCLALHSREE 626
+++ Y L L + EE
Sbjct: 762 RIQTDEIYRFLGNLQNLTNEE 782
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 224/441 (50%), Gaps = 19/441 (4%)
Query: 41 LFRQMKQNDIEPNNLTFPFIAKACAKLSD-LIYSQMIHGHIVKSP--------------F 85
L+ ++ + + FP + +ACA + L +HG I+K +
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 86 VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVM 145
+ L A K+FD M VRD+ +W+ ++ + G + LR+F M G++ D VT++
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 146 GLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEER 205
+ + L + +SVH D D ++CN+ ++ Y+KC DL +E +F I +
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAK- 265
Query: 206 LRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRL 265
+ VSW +M++ G+ + +L + M+ +G ++ T+ S+LSS + +G+
Sbjct: 266 -KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 266 VHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKG 324
VH + D + ++ L+ +Y++CG + + + DR V+W ++IS YA +G
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 325 DLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCN 384
+ +AL LF M PD T+ S IS C +G + LGK + + D V N
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQN 443
Query: 385 ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRP 444
+LIDMYSK GS+ A +F + + VV+W +M+ G + NG VEA+ LF + L
Sbjct: 444 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 445 NRVTFLAVLQACTHTGFLEKG 465
N VTFLAV+QAC+ G LEKG
Sbjct: 504 NEVTFLAVIQACSSIGSLEKG 524
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 209/422 (49%), Gaps = 21/422 (4%)
Query: 139 ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
+ FV L A +HLS+ VH I GVD D + + + Y + +L AE V
Sbjct: 99 SKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKV 158
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F G+ +R +V+W+++V+ C + +L ++ M+ +G D T++S++
Sbjct: 159 FDGMP--VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L R VH FDLD ++ N+L++MYSKCGD+ S+ +F+ I + VSWTAMIS
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y + ++ALR F M +G P+LVT+ S++S CG G + GK +A L
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 379 NVMVCN-ALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQL 437
N + AL+++Y++CG + D + + ++ +V+W ++I+ A G ++AL LF Q+
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 438 MELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYD-DKGISYNPELDHYSCMADLL 494
+ ++P+ T + + AC + G + G I +I+ D N +D YS
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYS------ 450
Query: 495 GRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYV 554
+ G + A + +S W ++LC + N A LF HS Y+
Sbjct: 451 -KSGSVDSASTVFNQIKHRS-VVTWNSMLCGFSQNGN----SVEAISLFDYMYHS---YL 501
Query: 555 EM 556
EM
Sbjct: 502 EM 503
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R+ I WNS I ++ + L LFRQM I+P+ T AC +
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 72 YSQMIHGHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQ 118
+ IHGH++++ + K +D A +F+++ R V +WN+ML GF+Q
Sbjct: 423 LGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQ 482
Query: 119 MGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSV 178
G + LF M ++ + VT + + QA L K VH I G+ D+
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFT 541
Query: 179 CNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYN 238
I YAKC DL AE VF + R S SM+ + +++ + M+ +
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS--SMINAYGMHGRIGSAISTFNQMVES 599
Query: 239 GFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
G + + +++LS+ ++ +G+ + +G + I + S+ GD+ A
Sbjct: 600 GTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEA 659
Query: 299 -RVLFDGICDRTRVSWTAMISG--YAQKGDLDEALRLFFAMEAAGELPDLVT 347
R + + W ++++G QK D+ +A++ +L D+VT
Sbjct: 660 YRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK--------NDLSDIVT 703
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 373 SGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALD 432
+G L+ + + LI+ Y+ GS +R +F A P + +I A+D
Sbjct: 27 TGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAID 86
Query: 433 LFHQLMELDLRPNRVTFLAVLQACTHT-GFLEKGWAI--SIIQ--YDDKGISYNPELDHY 487
L+H+L+ + ++ F +VL+AC + L G + II+ DD + L
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLL--- 143
Query: 488 SCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYV-AYCLFK 544
CM G+ G L +A MP++ D W TL+ +C +E GE V A +FK
Sbjct: 144 -CM---YGQTGNLSDAEKVFDGMPVR-DLVAWSTLVSSC-----LENGEVVKALRMFK 191
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/604 (31%), Positives = 301/604 (49%), Gaps = 22/604 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ IR + E+HK + LF MK + ++ TF + CA DL H I+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 82 KSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC L+ A +IF+ M RD +WN ++ + Q
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 128 LFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYA 187
LF M L GI +D + +A H L K VH + G+D D+ ++ I Y+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 188 KCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTV 247
KC +K A VF + E +VVS N+++AG + + ++++ ++ M+ G T
Sbjct: 576 KCGIIKDARKVFSSLPEW--SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITF 632
Query: 248 VSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVIN-TLISMYSKCGDIDSARVLFDGIC 306
+++ + PE+L G H GF + + +L+ MY + A LF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 307 D-RTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
++ V WT M+SG++Q G +EAL+ + M G LPD T ++++ C +L G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKI-VVSWTTMIAGCALN 424
+ + + N LIDMY+KCG + + ++F + + VVSW ++I G A N
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
G +AL +F + + + P+ +TFL VL AC+H G + G I + GI +
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI--EARV 870
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFK 544
DH +CM DLLGR G L+EA DF+++ +K DA +W +LL AC+IH + GE A L +
Sbjct: 871 DHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIE 930
Query: 545 LEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDR 604
LEP +++ YV ++N YA G W+ +R +M+ VKK PG S + +T F A D+
Sbjct: 931 LEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDK 990
Query: 605 YHAE 608
H+E
Sbjct: 991 SHSE 994
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/594 (26%), Positives = 268/594 (45%), Gaps = 64/594 (10%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
W V + +L+F +M+ P++L F V
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV---------------------TV 267
Query: 82 KSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADF 141
+ +++ +L A +F EM+ DV +WN M+ G + G + F+NMR +++
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 142 VTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T+ + A +L L VH+ I +G+ +++ V ++ +S Y+KC+ ++ A VF
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALV 261
+EE+ V WN+M+ G + + + + M +G+ +D T SLLS+ L
Sbjct: 388 LEEK--NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 262 QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYA 321
G HS I ++ V N L+ MY+KCG ++ AR +F+ +CDR V+W +I Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 322 QKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVM 381
Q + EA LF M G + D + S + C L GK + GL ++
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 382 VCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
++LIDMYSKCG I DAR++F +LPE VVS +IAG + N EA+ LF +++
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRG 624
Query: 442 LRPNRVTFLAVLQAC----------------THTGFLEKGWAISI----IQYDDKG---- 477
+ P+ +TF +++AC T GF +G + I + + +G
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA 684
Query: 478 ------ISYNPELDHYSCMADLLGRKGKLKEALDFVQSMP---IKSDAGIWGTLLCACKI 528
+S + ++ M + G +EAL F + M + D + T+L C +
Sbjct: 685 CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSV 744
Query: 529 HLNIEIGEYVAYCLF----KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKR 578
++ G + +F L+ ++ ++M YA G G + + M+R
Sbjct: 745 LSSLREGRAIHSLIFHLAHDLDELTSNTLIDM---YAKCGDMKGSSQVFDEMRR 795
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 237/507 (46%), Gaps = 54/507 (10%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHG 78
+ WNS + + + K L F + +N I PN TF + CA+ +++ + + IH
Sbjct: 125 VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHC 184
Query: 79 HIVK--------------SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
++K + KCDR+ A ++F+ + + W + G+ + G E
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ +F MR G + D HL+ V+V NT+I
Sbjct: 245 AVLVFERMRDEGHRPD---------------HLAF----------------VTVINTYI- 272
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
+ LK A L+F E VV+WN M++G ++ ++ +M + +
Sbjct: 273 ---RLGKLKDARLLFG--EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+T+ S+LS+ L G +VH+ I G ++ V ++L+SMYSKC +++A +F+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ ++ V W AMI GYA G+ + + LF M+++G D T S++S C S LE+G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
F + L N+ V NAL+DMY+KCG++ DAR++F + ++ V+W T+I +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPEL 484
EA DLF ++ + + + L+ACTH L +G + + + +L
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK---CGLDRDL 564
Query: 485 DHYSCMADLLGRKGKLKEALDFVQSMP 511
S + D+ + G +K+A S+P
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 177/433 (40%), Gaps = 73/433 (16%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L + K+VHS + +G+D++ + N + YAKC + AE F +E + V +WNSM+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE---KDVTAWNSML 132
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFD 276
+ + K L + + N + T +LS+ + GR +H I G +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 277 LDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAM 336
+ L+ MY+KC I AR +F+ I D V WT + SGY + G +EA+ +F M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 337 EAAGELPD---LVTVLS----------------------------MISGCGQSGA----- 360
G PD VTV++ MISG G+ G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 361 ------------------------------LELGKWFDNYACSGGLKDNVMVCNALIDMY 390
L+LG A GL N+ V ++L+ MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFL 450
SKC + A ++F AL EK V W MI G A NGE + ++LF + + TF
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 451 AVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
++L C + LE G I K L + + D+ + G L++A + M
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKK---LAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 511 PIKSDAGIWGTLL 523
D W T++
Sbjct: 490 -CDRDNVTWNTII 501
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 11/280 (3%)
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL G+ VHS + G D + + N ++ +Y+KC + A FD ++ +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
Y+ G + LR F ++ P+ T ++S C + +E G+ GL+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
N AL+DMY+KC I DAR +F + + V WT + +G G EA+ +F ++
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKG 498
+ RP+ + F+ V+ G L+ + G +P++ ++ M G++G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLF-------GEMSSPDVVAWNVMISGHGKRG 306
Query: 499 KLKEALDFVQSM---PIKSDAGIWGTLLCACKIHLNIEIG 535
A+++ +M +KS G++L A I N+++G
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACA---K 66
+ + R S + WNS I A L +F M+Q+ I P+ +TF + AC+ K
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849
Query: 67 LSD--LIYSQMI 76
+SD I+ MI
Sbjct: 850 VSDGRKIFEMMI 861
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/602 (29%), Positives = 305/602 (50%), Gaps = 28/602 (4%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIE--PNNLTFPFIAKACAKLSDLIYSQ 74
S++ +N IR V + H + +F +M ++ P+ T+PF+AKA +L +
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 75 MIHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
++HG I++S F + +++ A +FD M RDV SWN M+ G+ + G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
++ + L +F M + D T++ + H K L + ++VH + + V N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGF 240
++ Y KC + A VF +E R V++W M+ G T +++L R M + G
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERR--DVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 241 RLDVTTVVSLLSSFVCPEALV--QGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSA 298
R + T+ SL+S VC +AL G+ +H + D+ + +LISMY+KC +D
Sbjct: 316 RPNAVTIASLVS--VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 299 RVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+F G W+A+I+G Q + +AL LF M P++ T+ S++
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK----IVVSW 414
L Y G ++ L+ +YSKCG++ A ++F + EK VV W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+I+G ++G+ AL +F +++ + PN +TF + L AC+H+G +E+G +++ ++
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG--LTLFRFM 551
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
+ +HY+C+ DLLGR G+L EA + + ++P + + +WG LL AC H N+++
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQL 611
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
GE A LF+LEP + YV +AN YA GRW + +R+MM+ ++K PG S I
Sbjct: 612 GEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Query: 595 KT 596
+
Sbjct: 672 NS 673
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 225/478 (47%), Gaps = 13/478 (2%)
Query: 60 IAKACAKLSDLIYSQMIHGHIVKS---PFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGF 116
I+K A +I + GHI+ + + C + A K+F+EM + S+N ++ +
Sbjct: 31 ISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMY 90
Query: 117 AQMGFLENVLRLFYNMRLVGIQ--ADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
+ G + + +F M G++ D T + +AA K + L VH +
Sbjct: 91 VREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR 150
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D V N ++ Y ++MA VF ++ R V+SWN+M++G +D+L +
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNR--DVISWNTMISGYYRNGYMNDALMMFDW 208
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ LD T+VS+L + L GR VH + V N L++MY KCG
Sbjct: 209 MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D AR +FD + R ++WT MI+GY + GD++ AL L M+ G P+ VT+ S++S
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSV 328
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
CG + + GK +A + ++++ +LI MY+KC + +F + W
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+ +IAGC N +AL LF ++ D+ PN T ++L A L + A++I Y
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ--AMNIHCYL 446
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEA---LDFVQSMPIKSDAGIWGTLLCACKIH 529
K + LD + + + + G L+ A + +Q D +WG L+ +H
Sbjct: 447 TK-TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 276/565 (48%), Gaps = 36/565 (6%)
Query: 98 FDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHL 157
F + V +W +++ F L F MR G D + ++ L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 158 SLLKSVHSFGIHIGVDADVSVCNTWISSYAKC-------------------------DDL 192
+SVH F + +G+D D+ N ++ YAK +D+
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 193 KMAELVFC-GIEERLRT--------VVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLD 243
K + GI+ R VVS+N+++AG ++D+L R M + D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 244 VTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFD 303
T+ S+L F +++G+ +H + I G D DV + ++L+ MY+K I+ + +F
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 304 GICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALEL 363
+ R +SW ++++GY Q G +EALRLF M A P V S+I C L L
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 364 GKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCAL 423
GK Y GG N+ + +AL+DMYSKCG+I AR++F + VSWT +I G AL
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G EA+ LF ++ ++PN+V F+AVL AC+H G +++ W K N E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG--YFNSMTKVYGLNQE 479
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
L+HY+ +ADLLGR GKL+EA +F+ M ++ +W TLL +C +H N+E+ E VA +F
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
++ + YV M N YA GRW +A +R M++ ++K P S + KT F + D
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
Query: 604 RYHAESELTYPVLDCLALHSREEAY 628
R H + L + +E Y
Sbjct: 600 RSHPSMDKINEFLKAVMEQMEKEGY 624
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 225/485 (46%), Gaps = 60/485 (12%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
+ +S + W S IR +++ K L F +M+ + P++ FP + K+C + DL
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 72 YSQMIHGHIVKSPFVKCD-------------RLDCAYKI-----FDEMAVR--------- 104
+ + +HG IV+ + CD L KI FDEM R
Sbjct: 123 FGESVHGFIVRLG-MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 105 ------------------------DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQAD 140
DV S+N ++ G+AQ G E+ LR+ M ++ D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 141 FVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELV 198
T+ + I ++++ ++ K +H + I G+D+DV + ++ + YAK ++ +E V
Sbjct: 242 SFTLSSVL--PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 199 FCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPE 258
F + R +SWNS+VAG +++++L +R M+ + S++ +
Sbjct: 300 FSRL--YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
L G+ +H + + GF ++ + + L+ MYSKCG+I +AR +FD + VSWTA+I
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGAL-ELGKWFDNYACSGGLK 377
G+A G EA+ LF M+ G P+ V +++++ C G + E +F++ GL
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 378 DNVMVCNALIDMYSKCGSIGDARELFYAL-PEKIVVSWTTMIAGCALNGEFVEALDLFHQ 436
+ A+ D+ + G + +A + E W+T+++ C+++ A + +
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537
Query: 437 LMELD 441
+ +D
Sbjct: 538 IFTVD 542
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 245/436 (56%), Gaps = 5/436 (1%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D+ + NT ++ YAKC L+ A VF + +R V+W ++++G + D+ D+L F+
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQR--DFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ G+ + T+ S++ + G +H + GFD +V V + L+ +Y++ G
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+D A+++FD + R VSW A+I+G+A++ ++AL LF M G P + S+
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C +G LE GKW Y G K N L+DMY+K GSI DAR++F L ++ VVSW
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
+++ A +G EA+ F ++ + +RPN ++FL+VL AC+H+G L++GW +
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D GI PE HY + DLLGR G L AL F++ MPI+ A IW LL AC++H N E+
Sbjct: 392 D-GIV--PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHING 594
G Y A +F+L+P P+V + N YA GGRW+ A +R MK + VKK P S I
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Query: 595 KTCTFTAEDRYHAESE 610
F A D H + E
Sbjct: 509 AIHMFVANDERHPQRE 524
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 205/443 (46%), Gaps = 28/443 (6%)
Query: 6 LPPRL-NRIYRSSTINQWNSQIREAVNKNEAHK---TLLLFRQMKQNDIE----PNNLTF 57
PPRL +++ S +N + + E +++E+ K LL R ND+E P + F
Sbjct: 5 FPPRLLSQLKLSRRLNSLPAPVSED-SEDESLKFPSNDLLLR-TSSNDLEGSYIPADRRF 62
Query: 58 -PFIAKACAKLSDLIYSQMIHGHIVKSPF--------------VKCDRLDCAYKIFDEMA 102
+ K C LI +++H HI++S F KC L+ A K+F++M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
RD +W ++ G++Q + L F M G + T+ + +AA +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 163 VHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYG 222
+H F + G D++V V + + Y + + A+LVF +E R VSWN+++AG
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNALIAGHARR 240
Query: 223 DKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVI 282
+ +L ++ M+ +GFR + SL + L QG+ VH++ I G L
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 283 NTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGEL 342
NTL+ MY+K G I AR +FD + R VSW ++++ YAQ G EA+ F M G
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 343 PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAREL 402
P+ ++ LS+++ C SG L+ G + G+ ++D+ + G + A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 403 FYALP-EKIVVSWTTMIAGCALN 424
+P E W ++ C ++
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMH 443
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 8/283 (2%)
Query: 249 SLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDR 308
+LL + L+QGR+VH+H + F D+ + NTL++MY+KCG ++ AR +F+ + R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 309 TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFD 368
V+WT +ISGY+Q +AL F M G P+ T+ S+I G
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 369 NYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFV 428
+ G NV V +AL+D+Y++ G + DA+ +F AL + VSW +IAG A
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 429 EALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WAIS-IIQYDDKGISYNPELDH 486
+AL+LF ++ RP+ ++ ++ AC+ TGFLE+G W + +I+ +K +++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG---- 300
Query: 487 YSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIH 529
+ + D+ + G + +A + K D W +LL A H
Sbjct: 301 -NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 297/597 (49%), Gaps = 20/597 (3%)
Query: 42 FRQMKQNDIEPNNLTFPFIAKACAKLSDL--IYSQMIHGHIVKSPF-----VKCDRLDCA 94
F + ++ D+E + F F+ K C ++ L I +QM+ + K F V+ + +
Sbjct: 28 FEEARRGDLERD---FLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYS 84
Query: 95 YKIFDEMAVRDVASWNAMLVGFAQM-GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
+F + S+N M+ G E L L+ M+ G++ D T + A
Sbjct: 85 SFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAK 144
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
+ + + +SVHS +G++ DV + ++ I YAKC + A +F I ER VSWN
Sbjct: 145 LEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER--DTVSWN 202
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
SM++G + D+++ +R M GF D T+VS+L + L GRL+ I
Sbjct: 203 SMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK 262
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
L + + LISMY KCGD+DSAR +F+ + + RV+WTAMI+ Y+Q G EA +LF
Sbjct: 263 KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
F ME G PD T+ +++S CG GALELGK + +A L+ N+ V L+DMY KC
Sbjct: 323 FEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKC 382
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + +A +F A+P K +W MI A G EAL LF + + + P+ +TF+ VL
Sbjct: 383 GRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR---MSVPPSDITFIGVL 439
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC H G + +G P+++HY+ + DLL R G L EA +F++ P K
Sbjct: 440 SACVHAGLVHQG--CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKL-EPHSAAPYVEMANKYALGGRWDGVANI 572
D + +L AC ++ I E L ++ E +A YV +N A WD A +
Sbjct: 498 PDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKM 557
Query: 573 RTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRY-HAESELTYPVLDCLALHSREEAY 628
R +M+ V K PG S I G+ F A Y E + + D L + E Y
Sbjct: 558 RALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 191/404 (47%), Gaps = 21/404 (5%)
Query: 22 WNSQIREAVNK-NEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
+N IR N N+ L L+R+MK + ++P+ T+ F+ ACAKL ++ + +H +
Sbjct: 99 FNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSL 158
Query: 81 VKSP--------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVL 126
K + KC ++ A K+FDE+ RD SWN+M+ G+++ G+ ++ +
Sbjct: 159 FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAM 218
Query: 127 RLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
LF M G + D T++ + A H L + + I + + + IS Y
Sbjct: 219 DLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMY 278
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
KC DL A VF + ++ R V+W +M+ + K ++ + M G D T
Sbjct: 279 GKCGDLDSARRVFNQMIKKDR--VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGIC 306
+ ++LS+ AL G+ + +H ++ V L+ MY KCG ++ A +F+ +
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 307 DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG-K 365
+ +W AMI+ YA +G EAL LF M P +T + ++S C +G + G +
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCR 453
Query: 366 WFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK 409
+F + GL + +ID+ S+ G + +A E P K
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 292 bits (748), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 185/648 (28%), Positives = 313/648 (48%), Gaps = 47/648 (7%)
Query: 12 RIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLI 71
R + + W++ + N + +F + + + PN+ + + +AC+ SD +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN-SDFV 182
Query: 72 YSQ-------MIHGHIVKSPFVKCDRLDC----------AYKIFDEMAVRDVASWNAMLV 114
M GH V C +D AYK+FD+M+ +V +W M+
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
QMGF +R F +M L G ++D T+ + A ++LSL K +HS+ I G+
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 175 DVSVCNTWISSYAKC------DDLKMAELVFCGIEERLRTVVSWNSMVAG----CTYGDK 224
DV + + YAKC DD + VF +E+ +V+SW +++ G C
Sbjct: 303 DVEC--SLVDMYAKCSADGSVDDCRK---VFDRMEDH--SVMSWTALITGYMKNCNLAT- 354
Query: 225 FDDSLNFYRHMMYNGF----RLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+++N + M+ G ++ + P G+ V G + S
Sbjct: 355 --EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV---GKQVLGQAFKRGLASNSS 409
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V N++ISM+ K ++ A+ F+ + ++ VS+ + G + + ++A +L +
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 341 ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDAR 400
T S++SG G++ G+ + GL N VCNALI MYSKCGSI A
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 401 ELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTG 460
+F + + V+SWT+MI G A +G + L+ F+Q++E ++PN VT++A+L AC+H G
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Query: 461 FLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWG 520
+ +GW Y+D I P+++HY+CM DLL R G L +A +F+ +MP ++D +W
Sbjct: 590 LVSEGWRHFNSMYEDHKI--KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 521 TLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQ 580
T L AC++H N E+G+ A + +L+P+ A Y++++N YA G+W+ +R MK
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 581 VKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAY 628
+ K G S + K F D H + Y LD L + Y
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 226/493 (45%), Gaps = 35/493 (7%)
Query: 1 MAVSSLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEP-NNLTFPF 59
+ + S P NRI N + I +N + + M ++ I P +++TF
Sbjct: 14 LPIKSQPSVSNRI------NVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSS 67
Query: 60 IAKACAKLSDLIYSQMIHGHIVK--------------SPFVKCDRLDCAYKIFDEM---A 102
+ K+C + D +++H +++ S + K A +F+ M
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 103 VRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKS 162
RDV SW+AM+ + G + +++F +G+ + + +A ++ + + +
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 163 VHSFGIHIG-VDADVSVCNTWISSYAKCDD-LKMAELVFCGIEERLRTVVSWNSMVAGCT 220
F + G ++DV V + I + K ++ + A VF + E VV+W M+ C
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCM 245
Query: 221 YGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+++ F+ M+ +GF D T+ S+ S+ E L G+ +HS I G DV
Sbjct: 246 QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE 305
Query: 281 VINTLISMYSKC---GDIDSARVLFDGICDRTRVSWTAMISGYAQKGDL-DEALRLFFAM 336
+L+ MY+KC G +D R +FD + D + +SWTA+I+GY + +L EA+ LF M
Sbjct: 306 C--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Query: 337 EAAGEL-PDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGS 395
G + P+ T S CG +GK A GL N V N++I M+ K
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 396 IGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
+ DA+ F +L EK +VS+ T + G N F +A L ++ E +L + TF ++L
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 456 CTHTGFLEKGWAI 468
+ G + KG I
Sbjct: 484 VANVGSIRKGEQI 496
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 235 MMYNGFR-LDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCG 293
M +G R +D T SLL S + G+LVH+ I + + D + N+LIS+YSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 294 DIDSARVLFDGI---CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLS 350
D A +F+ + R VSW+AM++ Y G +A+++F G +P+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 351 MISGCGQSGALELGKWFDNYAC-SGGLKDNVMVCNALIDMYSKC-GSIGDARELFYALPE 408
+I C S + +G+ + +G + +V V +LIDM+ K S +A ++F + E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 409 KIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG--- 465
VV+WT MI C G EA+ F ++ ++ T +V AC L G
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 466 --WAISIIQYDDKGISYNPELDHYS-CMAD 492
WAI DD S +D Y+ C AD
Sbjct: 292 HSWAIRSGLVDDVECSL---VDMYAKCSAD 318
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/589 (32%), Positives = 293/589 (49%), Gaps = 30/589 (5%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQ--NDIE-PNNLTFPFIAKACAKLSDLIYSQMIHG 78
W + I V E+ L +M +D++ PN T +AC+ L L + +HG
Sbjct: 195 WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 254
Query: 79 HIVK-----SPFVKCDRLDC---------AYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
VK S FV+ AY F E+ D+ SW +++ A+ G +E
Sbjct: 255 FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE 314
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+F+ M+ G+ D V + L + K+ H F I D +VCN+ +S
Sbjct: 315 SFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLS 374
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
Y K + L +AE +FC I E +WN+M+ G + +R + G +D
Sbjct: 375 MYCKFELLSVAEKLFCRISEE-GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDS 433
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
+ S++SS A++ G+ +H + + DL +SV+N+LI +Y K GD+ A +F
Sbjct: 434 ASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-- 491
Query: 305 IC--DRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALE 362
C D ++W AMI+ Y ++A+ LF M + P +T+++++ C +G+LE
Sbjct: 492 -CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLE 550
Query: 363 LGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCA 422
G+ Y + N+ + ALIDMY+KCG + +RELF A +K V W MI+G
Sbjct: 551 RGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYG 610
Query: 423 LNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWA--ISIIQYDDKGISY 480
++G+ A+ LF Q+ E D++P TFLA+L ACTH G +E+G + + QYD K
Sbjct: 611 MHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVK---- 666
Query: 481 NPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAY 540
P L HYSC+ DLL R G L+EA V SMP D IWGTLL +C H E+G +A
Sbjct: 667 -PNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAE 725
Query: 541 CLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSL 589
+P + Y+ +AN Y+ G+W+ R MM+ + V K G S+
Sbjct: 726 RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSV 774
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 242/548 (44%), Gaps = 26/548 (4%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L R+ + I WNS I+ + + ++L F M + P++ T P + AC
Sbjct: 76 NLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSAC 135
Query: 65 AKLSDLIYSQMIHGHIVK-----------SPFV----KCDRLDCAYKIFDEMAVRDVASW 109
A+L +HG ++K + FV KC L A +FDEM RDV +W
Sbjct: 136 AELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAW 195
Query: 110 NAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLT---QAAIHAKHLSLLKSVHSF 166
A++ G Q G E L M G D L QA + L + +H F
Sbjct: 196 TAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGF 255
Query: 167 GIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFD 226
+ G+ + V ++ S Y+K + A L F + + + SW S++A +
Sbjct: 256 AVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD--EDMFSWTSIIASLARSGDME 313
Query: 227 DSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLI 286
+S + + M G D + L++ + QG+ H I + F LD +V N+L+
Sbjct: 314 ESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLL 373
Query: 287 SMYSKCGDIDSARVLFDGICDR-TRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDL 345
SMY K + A LF I + + +W M+ GY + + + LF ++ G D
Sbjct: 374 SMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDS 433
Query: 346 VTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYA 405
+ S+IS C GA+ LGK Y L + V N+LID+Y K G + A +F
Sbjct: 434 ASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE 493
Query: 406 LPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG 465
+ V++W MIA + +A+ LF +++ + +P+ +T + +L AC +TG LE+G
Sbjct: 494 -ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG 552
Query: 466 WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCA 525
+I + L + + D+ + G L+++ + + K DA W ++
Sbjct: 553 ---QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK-DAVCWNVMISG 608
Query: 526 CKIHLNIE 533
+H ++E
Sbjct: 609 YGMHGDVE 616
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 194/420 (46%), Gaps = 11/420 (2%)
Query: 83 SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFV 142
S + + + + ++F + RD+ WN+++ G L F++M L G D
Sbjct: 67 SSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHF 126
Query: 143 TVMGLTQAAIHAKHLSLLKSVHSFGI-HIGVDADVSVCNTWISSYAKCDDLKMAELVFCG 201
T + A + VH + H G D + +V +++ Y+KC L+ A LVF
Sbjct: 127 TAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDE 186
Query: 202 IEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSF-VCPE-- 258
+ + R VV+W ++++G + + L + M G +D +L F C
Sbjct: 187 MPD--RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLG 244
Query: 259 ALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMIS 318
AL +GR +H + G V +++ S YSK G+ A + F + D SWT++I+
Sbjct: 245 ALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIA 304
Query: 319 GYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKD 378
A+ GD++E+ +F+ M+ G PD V + +I+ G+ + GK F +
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL 364
Query: 379 NVMVCNALIDMYSKCGSIGDARELFYALPEK-IVVSWTTMIAGCALNGEFVEALDLFHQL 437
+ VCN+L+ MY K + A +LF + E+ +W TM+ G V+ ++LF ++
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 438 MELDLRPNRVTFLAVLQACTHTG--FLEKGWAISIIQYD-DKGIS-YNPELDHYSCMADL 493
L + + + +V+ +C+H G L K +++ D IS N +D Y M DL
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 10/297 (3%)
Query: 157 LSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMV 216
L L+ ++ I G+ ++ V + ISSYA ++ VF + R + WNS++
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR--DIFLWNSII 97
Query: 217 AGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI---HY 273
+ SL F+ M+ +G D T ++S+ C E L HG+ H
Sbjct: 98 KAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSA--CAELLWFHVGTFVHGLVLKHG 155
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
GFD + +V + + YSKCG + A ++FD + DR V+WTA+ISG+ Q G+ + L
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 334 FAMEAAG---ELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMY 390
M +AG + P+ T+ C GAL+ G+ +A GL + V +++ Y
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 391 SKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
SK G+ +A F L ++ + SWT++IA A +G+ E+ D+F ++ + P+ V
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 95/244 (38%), Gaps = 22/244 (9%)
Query: 343 PDLVTVLSMISG--------------CGQSGALELGKWFDNYACSGGLKDNVMVCNALID 388
P+LV L +S C QS +LE + + +GGL +N+ V + LI
Sbjct: 8 PNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLIS 67
Query: 389 MYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVT 448
Y+ G + +F+ + + + W ++I NG++ +L F ++ P+ T
Sbjct: 68 SYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFT 127
Query: 449 FLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQ 508
V+ AC + G + + G N + + + G L++A
Sbjct: 128 APMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVG--ASFVYFYSKCGFLQDACLVFD 185
Query: 509 SMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDG 568
MP + D W ++ +++ GE + + HSA V+ N L +
Sbjct: 186 EMPDR-DVVAWTAIISG-----HVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239
Query: 569 VANI 572
+N+
Sbjct: 240 CSNL 243
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 314/614 (51%), Gaps = 36/614 (5%)
Query: 21 QWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHI 80
WN + ++ + L F +++ EPN T + AC L + IHG++
Sbjct: 115 SWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYV 172
Query: 81 VKSPFVKCDRLD----CAY---------KIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
++S F + C Y K+FDEM+ RDV SW+ ++ + Q L+
Sbjct: 173 IRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLK 232
Query: 128 LFYNM-RLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVD-ADVSVCNTWISS 185
LF M + D VTV + +A + + + +SVH F I G D ADV VCN+ I
Sbjct: 233 LFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDM 292
Query: 186 YAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVT 245
Y+K D+ A VF E R +VSWNS++AG + ++D++L + M+ +D
Sbjct: 293 YSKGFDVDSAFRVF--DETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEV 350
Query: 246 TVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGI 305
TVVSLL E + + +H I G++ + +++LI Y+ C +D A + D +
Sbjct: 351 TVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM 410
Query: 306 CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGK 365
+ VS + MISG A G DEA+ +F M + P+ +TV+S+++ C S L K
Sbjct: 411 TYKDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSK 467
Query: 366 WFDNYACSGGLKDN-VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALN 424
W A L N + V +++D Y+KCG+I AR F + EK ++SWT +I+ A+N
Sbjct: 468 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 527
Query: 425 GEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI--SIIQYDDKGISYNP 482
G +AL LF ++ + PN VT+LA L AC H G ++KG I S+++ D K P
Sbjct: 528 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK-----P 582
Query: 483 ELDHYSCMADLLGRKGKLKEALDFVQSMP--IKSDAGIWGTLLCACKIHLN--IEIGEYV 538
L HYSC+ D+L R G++ A++ ++++P +K+ A WG +L C+ I E V
Sbjct: 583 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVV 642
Query: 539 AYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCT 598
A L +LEP ++ Y+ ++ +A W+ VA +R ++K +V+ G S+
Sbjct: 643 AEVL-ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKR 701
Query: 599 FTAEDRY-HAESEL 611
F A D+ ++SEL
Sbjct: 702 FLAGDKLSQSDSEL 715
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 222/471 (47%), Gaps = 30/471 (6%)
Query: 17 STINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNN-LTFPFIAKACAKLSDLIYSQM 75
S + +S+I++A + + + + ++++ ++ N+ FP + KACAKLS L +
Sbjct: 9 SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRC 68
Query: 76 IHGHIVKSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGF 121
I ++K F +KC L + FD M RD SWN ++ G GF
Sbjct: 69 IQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGF 128
Query: 122 LENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLL--KSVHSFGIHIGVDADVSVC 179
E L F +R+ G + + T++ IHA + +H + I G SV
Sbjct: 129 EEEGLWWFSKLRVWGFEPNTSTLV----LVIHACRSLWFDGEKIHGYVIRSGFCGISSVQ 184
Query: 180 NTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNG 239
N+ + YA D L +L F + E R V+SW+ ++ + L ++ M++
Sbjct: 185 NSILCMYADSDSLSARKL-FDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEA 241
Query: 240 -FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDL-DVSVINTLISMYSKCGDIDS 297
D TV S+L + E + GR VH I GFDL DV V N+LI MYSK D+DS
Sbjct: 242 KTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 301
Query: 298 ARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQ 357
A +FD R VSW ++++G+ DEAL +F M D VTV+S++ C
Sbjct: 302 AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 361
Query: 358 SGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTM 417
K G + N + ++LID Y+ C + DA + ++ K VVS +TM
Sbjct: 362 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 421
Query: 418 IAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKG-WA 467
I+G A G EA+ +F + + PN +T +++L AC+ + L WA
Sbjct: 422 ISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWA 469
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 280/535 (52%), Gaps = 11/535 (2%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIH 153
A K+FDE+ R V+ +N+M+V +++ + VLRL+ M IQ D T +A +
Sbjct: 69 ARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS 128
Query: 154 AKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWN 213
L ++V + G DV VC++ ++ Y KC + AE++F + +R V+ W
Sbjct: 129 GLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR--DVICWT 186
Query: 214 SMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHY 273
+MV G K ++ FYR M GF D ++ LL + GR VH +
Sbjct: 187 TMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT 246
Query: 274 GFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLF 333
G ++V V +L+ MY+K G I+ A +F + +T VSW ++ISG+AQ G ++A
Sbjct: 247 GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAV 306
Query: 334 FAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
M++ G PDLVT++ ++ C Q G+L+ G+ Y + D V AL+DMYSKC
Sbjct: 307 VEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKC 365
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G++ +RE+F + K +V W TMI+ ++G E + LF ++ E ++ P+ TF ++L
Sbjct: 366 GALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLL 425
Query: 454 QACTHTGFLEKG---WAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSM 510
A +H+G +E+G +++ I +Y P HY C+ DLL R G+++EALD + S
Sbjct: 426 SALSHSGLVEQGQHWFSVMINKY-----KIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 511 PIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVA 570
+ + IW LL C H N+ +G+ A + +L P S ++N +A +W VA
Sbjct: 481 KLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVA 540
Query: 571 NIRTMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSRE 625
+R +M+ ++K PG S +NG+ TF ED H E VL L R+
Sbjct: 541 KVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRD 595
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 195/428 (45%), Gaps = 37/428 (8%)
Query: 19 INQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC-------------A 65
++ +NS I + L L+ QM I+P++ TF KAC
Sbjct: 81 VSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWC 140
Query: 66 KLSDLIYSQMIH-GHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
K D Y + V + ++KC ++D A +F +MA RDV W M+ GFAQ G
Sbjct: 141 KAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLK 200
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWIS 184
+ + M+ G D V ++GL QA+ + +SVH + G+ +V V + +
Sbjct: 201 AVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVD 260
Query: 185 SYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDV 244
YAK +++A VF + +T VSW S+++G + + M GF+ D+
Sbjct: 261 MYAKVGFIEVASRVFSRM--MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDL 318
Query: 245 TTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDG 304
T+V +L + +L GRLVH + I LD L+ MYSKCG + S+R +F+
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCY-ILKRHVLDRVTATALMDMYSKCGALSSSREIFEH 377
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + V W MIS Y G+ E + LF M + PD T S++S SG +E G
Sbjct: 378 VGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQG 437
Query: 365 K-WF----DNYACSGGLKDNVMVCNALIDMYSKCGSIGDA------RELFYALPEKIVVS 413
+ WF + Y K V LID+ ++ G + +A +L ALP
Sbjct: 438 QHWFSVMINKYKIQPSEKHYV----CLIDLLARAGRVEEALDMINSEKLDNALP-----I 488
Query: 414 WTTMIAGC 421
W +++GC
Sbjct: 489 WVALLSGC 496
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 188/396 (47%), Gaps = 15/396 (3%)
Query: 160 LKSVHSFGIHIG-VDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAG 218
+ +H+F I G + S+ I+S + ++ A VF + +R +V +NSM+
Sbjct: 33 ITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSV--YNSMIVV 90
Query: 219 CTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLD 278
+ G D+ L Y M+ + D +T + + + L +G V + +G+ D
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 279 VSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA 338
V V ++++++Y KCG +D A VLF + R + WT M++G+AQ G +A+ + M+
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 339 AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGD 398
G D V +L ++ G G ++G+ Y GL NV+V +L+DMY+K G I
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 399 ARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTH 458
A +F + K VSW ++I+G A NG +A + ++ L +P+ VT + VL AC+
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 459 TGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGRKGKLKEALDFVQSMPIKSDA 516
G L+ G + I LD + A D+ + G L + + + + + D
Sbjct: 331 VGSLKTGRLVHCY------ILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVG-RKDL 383
Query: 517 GIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAP 552
W T++ IH N G+ V K+ + P
Sbjct: 384 VCWNTMISCYGIHGN---GQEVVSLFLKMTESNIEP 416
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 13/150 (8%)
Query: 18 TINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIH 77
T W S I A+K +M+ +P+ +T + AC+++ L +++H
Sbjct: 282 TAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVH 341
Query: 78 GHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLEN 124
+I+K + KC L + +IF+ + +D+ WN M+ + G +
Sbjct: 342 CYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQE 401
Query: 125 VLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
V+ LF M I+ D T L A H+
Sbjct: 402 VVSLFLKMTESNIEPDHATFASLLSALSHS 431
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/601 (29%), Positives = 303/601 (50%), Gaps = 21/601 (3%)
Query: 22 WNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIV 81
WN+ I + + LF MK++ + + +F + K A + + +HG ++
Sbjct: 69 WNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128
Query: 82 KSPF--------------VKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLR 127
K + KC+R++ A++ F E++ + SWNA++ GF Q+ ++
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188
Query: 128 LFYNMRL-VGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSY 186
L M + + D T L +LLK VH+ + +G+ ++++CN ISSY
Sbjct: 189 LLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSY 248
Query: 187 AKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTT 246
A C + A+ VF G+ + ++SWNSM+AG + + + + + M + D+ T
Sbjct: 249 ADCGSVSDAKRVFDGLGGS-KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 247 VVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSK--CGDIDSARVLFDG 304
LLS+ E + G+ +H I G + S N LISMY + G ++ A LF+
Sbjct: 308 YTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES 367
Query: 305 ICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELG 364
+ + +SW ++I+G+AQKG ++A++ F + ++ D +++ C L+LG
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 365 KWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEK-IVVSWTTMIAGCAL 423
+ A G N V ++LI MYSKCG I AR+ F + K V+W MI G A
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 424 NGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPE 483
+G +LDLF Q+ +++ + VTF A+L AC+HTG +++G + ++ + P
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG--LELLNLMEPVYKIQPR 545
Query: 484 LDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEIGEYVAYCLF 543
++HY+ DLLGR G + +A + ++SMP+ D + T L C+ IE+ VA L
Sbjct: 546 MEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL 605
Query: 544 KLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQSLFHINGKTCTFTAED 603
++EP YV +++ Y+ +W+ A+++ MMK VKK PG S I + F AED
Sbjct: 606 EIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAED 665
Query: 604 R 604
R
Sbjct: 666 R 666
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 188/412 (45%), Gaps = 11/412 (2%)
Query: 61 AKACAKLSDLIYSQMIHGHIVKSPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMG 120
A C +SD+ S I +K F L A +FDEM RD SWN M+ G+ G
Sbjct: 26 AIKCGSISDIYVSNRILDSYIKFGF-----LGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 121 FLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCN 180
LE+ LF M+ G D + L + K L + VH I G + +V V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 181 TWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM-MYNG 239
+ + YAKC+ ++ A F I E VSWN+++AG + M M
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISE--PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 240 FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSAR 299
+D T LL+ P + VH+ + G ++++ N +IS Y+ CG + A+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 300 VLFDGI-CDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQS 358
+FDG+ + +SW +MI+G+++ + A LF M+ D+ T ++S C
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 359 GALELGKWFDNYACSGGLKDNVMVCNALIDMYSK--CGSIGDARELFYALPEKIVVSWTT 416
GK GL+ NALI MY + G++ DA LF +L K ++SW +
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 417 MIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAI 468
+I G A G +A+ F L +++ + F A+L++C+ L+ G I
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 145/306 (47%), Gaps = 16/306 (5%)
Query: 160 LKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGC 219
L H + I G +D+ V N + SY K L A ++F E R VSWN+M++G
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLF--DEMPKRDSVSWNTMISGY 76
Query: 220 TYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDV 279
T K +D+ + M +G +D + LL + G VH I G++ +V
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 280 SVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEA- 338
V ++L+ MY+KC ++ A F I + VSW A+I+G+ Q D+ A L ME
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 339 ------AGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSK 392
AG L+T+L C L K GL+ + +CNA+I Y+
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCN------LLKQVHAKVLKLGLQHEITICNAMISSYAD 250
Query: 393 CGSIGDARELFYAL-PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLA 451
CGS+ DA+ +F L K ++SW +MIAG + + A +LF Q+ + + T+
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 452 VLQACT 457
+L AC+
Sbjct: 311 LLSACS 316
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 15 RSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQ 74
+S + WNS I K + + F ++ ++I+ ++ F + ++C+ L+ L Q
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 75 MIHGHIVKSPFV--------------KCDRLDCAYKIFDEMAVR-DVASWNAMLVGFAQM 119
IH KS FV KC ++ A K F +++ + +WNAM++G+AQ
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Query: 120 GFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHA 154
G + L LF M ++ D VT + A H
Sbjct: 489 GLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 282/538 (52%), Gaps = 17/538 (3%)
Query: 105 DVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVH 164
DV SWN+++ A+ G L F +MR + + + +A + K H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 165 SFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDK 224
G +D+ V + I Y+ C L+ A VF I +R +VSW SM+ G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR--NIVSWTSMIRGYDLNGN 157
Query: 225 FDDSLNFYRHMMYN------GFRLDVTTVVSLLSSFVCPEALVQG--RLVHSHGIHYGFD 276
D+++ ++ ++ + LD +VS++S+ C +G +HS I GFD
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA--CSRVPAKGLTESIHSFVIKRGFD 215
Query: 277 LDVSVINTLISMYSKCGD--IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFF 334
VSV NTL+ Y+K G+ + AR +FD I D+ RVS+ +++S YAQ G +EA +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 335 AMEAAGELP-DLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKC 393
+ + + +T+ +++ SGAL +GK + GL+D+V+V ++IDMY KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 394 GSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVL 453
G + AR+ F + K V SWT MIAG ++G +AL+LF +++ +RPN +TF++VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 454 QACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIK 513
AC+H G +GW G+ P L+HY CM DLLGR G L++A D +Q M +K
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGV--EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 514 SDAGIWGTLLCACKIHLNIEIGEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIR 573
D+ IW +LL AC+IH N+E+ E LF+L+ + Y+ +++ YA GRW V +R
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 574 TMMKRNQVKKFPGQSLFHINGKTCTFTAEDRYHAESELTYPVLDCLALHSREEAYSSH 631
+MK + K PG SL +NG+ F D H + E Y L L E Y S+
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 228/465 (49%), Gaps = 33/465 (7%)
Query: 5 SLPPRLNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKAC 64
+L NR + + WNS I + ++ + LL F M++ + P +FP KAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 65 AKLSDLIYSQMIHGH----------IVKSPFV----KCDRLDCAYKIFDEMAVRDVASWN 110
+ L D+ + H V S + C +L+ A K+FDE+ R++ SW
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 111 AMLVGFAQMGFLENVLRLFYNMRLVGIQAD----FVTVMGLT---QAAIHAKHLSLLKSV 163
+M+ G+ G + + LF ++ LV D F+ MGL A L +S+
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 164 HSFGIHIGVDADVSVCNTWISSYAKCDD--LKMAELVFCGIEERLRTVVSWNSMVAGCTY 221
HSF I G D VSV NT + +YAK + + +A +F I ++ R VS+NS+++
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVYAQ 263
Query: 222 GDKFDDSLNFYRHMMYNG-FRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVS 280
+++ +R ++ N + T+ ++L + AL G+ +H I G + DV
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 281 VINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAG 340
V ++I MY KCG +++AR FD + ++ SWTAMI+GY G +AL LF AM +G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 341 ELPDLVTVLSMISGCGQSGA-LELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDA 399
P+ +T +S+++ C +G +E +WF+ G++ + ++D+ + G + A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 400 RELFYAL---PEKIVVSWTTMIAGCALNGEFVEALDLFHQLMELD 441
+L + P+ I+ W++++A C ++ A +L ELD
Sbjct: 444 YDLIQRMKMKPDSII--WSSLLAACRIHKNVELAEISVARLFELD 486
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/594 (30%), Positives = 303/594 (51%), Gaps = 23/594 (3%)
Query: 10 LNRIYRSSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSD 69
+RI S ++ W + N+A L +F++M+ + +E NN T + AC + S
Sbjct: 308 FSRIPNPSVVS-WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 70 LIYSQMIHGHIVKSPFV--------------KCDRLDCAYKIFDEMA-VRDVASWNAMLV 114
+ + +H + KS F K +D + ++F+++ ++ N M+
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMIT 426
Query: 115 GFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDA 174
F+Q +RLF M G++ D +V L L+L K VH + + G+
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVL 483
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
D++V ++ + Y+KC L+ + +F GI + W SM++G +++ +
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIP--FKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M+ +G D +T+ ++L+ +L +G+ +H + + G D + + + L++MYSKCG
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ AR ++D + + VS +++ISGY+Q G + + LF M +G D + S++
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
S LG Y GL V ++L+ MYSK GSI D + F + +++W
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYD 474
T +IA A +G+ EAL +++ + E +P++VTF+ VL AC+H G +E+ +
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK 781
Query: 475 DKGISYNPELDHYSCMADLLGRKGKLKEALDFVQSMPIKSDAGIWGTLLCACKIHLNIEI 534
D GI PE HY CM D LGR G+L+EA F+ +M IK DA +WGTLL ACKIH +E+
Sbjct: 782 DYGI--EPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 535 GEYVAYCLFKLEPHSAAPYVEMANKYALGGRWDGVANIRTMMKRNQVKKFPGQS 588
G+ A +LEP A Y+ ++N A G WD V R +MK V+K PG S
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 222/460 (48%), Gaps = 20/460 (4%)
Query: 12 RIYR---SSTINQWNSQIREAVNKNEAHKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLS 68
+++R S+ + WN+ I A+ LF +M +P++ T+ + ACA L
Sbjct: 206 KVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLE 265
Query: 69 DLIYSQMIHGHIVKSP-------------FVKCDRLDCAYKIFDEMAVRDVASWNAMLVG 115
L + +++ ++K + KC + A ++F + V SW ML G
Sbjct: 266 KLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 116 FAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDAD 175
+ + + L +F MR G++ + TV + A + VH++ G D
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 176 VSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHM 235
SV IS Y+K D+ ++E VF +++ R + N M+ + K ++ + M
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRM 444
Query: 236 MYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDI 295
+ G R D +V SLLS C L G+ VH + + G LD++V ++L ++YSKCG +
Sbjct: 445 LQEGLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 296 DSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGC 355
+ + LF GI + W +MISG+ + G L EA+ LF M G PD T+ ++++ C
Sbjct: 502 EESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVC 561
Query: 356 GQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWT 415
+L GK Y G+ + + +AL++MYSKCGS+ AR+++ LPE VS +
Sbjct: 562 SSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCS 621
Query: 416 TMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQA 455
++I+G + +G + LF ++ + ++L+A
Sbjct: 622 SLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 232/495 (46%), Gaps = 32/495 (6%)
Query: 36 HKTLLLFRQMKQNDIEPNNLTFPFIAKACAKLSDLIYSQMIHGHIVK------------- 82
++L F +M E N +++ + AC+ L ++S+++ H +K
Sbjct: 132 EESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESAL 191
Query: 83 -SPFVKCDRLDCAYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQ-AD 140
F K R + AYK+F + +V WN ++ G + V LF+ M VG Q D
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPD 250
Query: 141 FVTVMGLTQAAIHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFC 200
T + A + L K V + I G + DV VC + YAKC + A VF
Sbjct: 251 SYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 201 GIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEAL 260
I +VVSW M++G T + +L ++ M ++G ++ TV S++S+ P +
Sbjct: 310 RIPN--PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 261 VQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSW-TAMISG 319
+ VH+ GF LD SV LISMYSK GDID + +F+ + D R + MI+
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS 427
Query: 320 YAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDN 379
++Q +A+RLF M G D +V S++S L LGK Y GL +
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLD 484
Query: 380 VMVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLME 439
+ V ++L +YSKCGS+ ++ +LF +P K W +MI+G G EA+ LF ++++
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 440 LDLRPNRVTFLAVLQACTHTGFLEKGWAI---SIIQYDDKGISYNPELDHYSCMADLLGR 496
P+ T AVL C+ L +G I ++ DKG +D S + ++ +
Sbjct: 545 DGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG------MDLGSALVNMYSK 598
Query: 497 KGKLKEALDFVQSMP 511
G LK A +P
Sbjct: 599 CGSLKLARQVYDRLP 613
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 198/438 (45%), Gaps = 25/438 (5%)
Query: 94 AYKIFDEMAVRDVASWNAMLVGFAQMGFLENVLRLFYNMRLVGIQADFVTVMGLTQA--A 151
A K+FD + DV S N M+ G+ Q E LR F M +G +A+ ++ + A A
Sbjct: 103 AAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSA 162
Query: 152 IHAKHLSLLKSVHSFGIHIGVDADVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVS 211
+ A S L H+ I +G V + I ++K + A VF + V
Sbjct: 163 LQAPLFSELVCCHT--IKMGYFFYEVVESALIDVFSKNLRFEDAYKVF--RDSLSANVYC 218
Query: 212 WNSMVAGCTYGDKFDDSLNFYRHMMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGI 271
WN+++AG + + + M + D T S+L++ E L G++V + I
Sbjct: 219 WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI 278
Query: 272 HYGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALR 331
G + DV V ++ +Y+KCG + A +F I + + VSWT M+SGY + D AL
Sbjct: 279 KCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE 337
Query: 332 LFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYS 391
+F M +G + TV S+IS CG+ + + G + V ALI MYS
Sbjct: 338 IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYS 397
Query: 392 KCGSIGDARELFYALP----EKIVVSWTTMIAGCALNGEFVEALDLFHQLMELDLRPNRV 447
K G I + ++F L + IV MI + + + +A+ LF ++++ LR +
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIV---NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEF 454
Query: 448 TFLAVLQA--CTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMADLLGRKGKLKEALD 505
+ ++L C + G G+ + G+ +L S + L + G L+E+
Sbjct: 455 SVCSLLSVLDCLNLGKQVHGYTL------KSGLVL--DLTVGSSLFTLYSKCGSLEESYK 506
Query: 506 FVQSMPIKSDAGIWGTLL 523
Q +P K +A W +++
Sbjct: 507 LFQGIPFKDNA-CWASMI 523
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 3/282 (1%)
Query: 175 DVSVCNTWISSYAKCDDLKMAELVFCGIEERLRTVVSWNSMVAGCTYGDKFDDSLNFYRH 234
DV + + +S Y+ + A +F I + VVS N M++G F++SL F+
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQP--DVVSCNIMISGYKQHRLFEESLRFFSK 140
Query: 235 MMYNGFRLDVTTVVSLLSSFVCPEALVQGRLVHSHGIHYGFDLDVSVINTLISMYSKCGD 294
M + GF + + S++S+ +A + LV H I G+ V + LI ++SK
Sbjct: 141 MHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 295 IDSARVLFDGICDRTRVSWTAMISGYAQKGDLDEALRLFFAMEAAGELPDLVTVLSMISG 354
+ A +F W +I+G + + LF M + PD T S+++
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 355 CGQSGALELGKWFDNYACSGGLKDNVMVCNALIDMYSKCGSIGDARELFYALPEKIVVSW 414
C L GK G +D V VC A++D+Y+KCG + +A E+F +P VVSW
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 415 TTMIAGCALNGEFVEALDLFHQLMELDLRPNRVTFLAVLQAC 456
T M++G + + AL++F ++ + N T +V+ AC
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 17/258 (6%)
Query: 264 RLVHSHGIH-YGFDLDVSVINTLISMYSKCGDIDSARVLFDGICDRTRVSWTAMISGYAQ 322
+++ +H + Y DV + +L+S YS G + A LFD I VS MISGY Q
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 323 KGDLDEALRLFFAMEAAGELPDLVTVLSMISGCGQSGALELGKWFDNYACSGGLKDNV-- 380
+E+LR F M G + ++ S+IS C AL+ F C +K
Sbjct: 128 HRLFEESLRFFSKMHFLGFEANEISYGSVISAC---SALQ-APLFSELVCCHTIKMGYFF 183
Query: 381 --MVCNALIDMYSKCGSIGDARELFYALPEKIVVSWTTMIAGCALNGEFVEALDLFHQLM 438
+V +ALID++SK DA ++F V W T+IAG N + DLFH++
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 439 ELDLRPNRVTFLAVLQACTHTGFLEKGWAISIIQYDDKGISYNPELDHYSCMA--DLLGR 496
+P+ T+ +VL AC LEK ++Q + I E D + C A DL +
Sbjct: 244 VGFQKPDSYTYSSVLAACAS---LEKLRFGKVVQ--ARVIKCGAE-DVFVCTAIVDLYAK 297
Query: 497 KGKLKEALDFVQSMPIKS 514
G + EA++ +P S
Sbjct: 298 CGHMAEAMEVFSRIPNPS 315
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,470,639
Number of Sequences: 539616
Number of extensions: 9287737
Number of successful extensions: 32728
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 25055
Number of HSP's gapped (non-prelim): 2289
length of query: 641
length of database: 191,569,459
effective HSP length: 124
effective length of query: 517
effective length of database: 124,657,075
effective search space: 64447707775
effective search space used: 64447707775
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)