BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048328
(318 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 76/95 (80%), Gaps = 3/95 (3%)
Query: 16 QEDFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQED 75
+E+F D + +DHPIW I T GL QS+I+SI + YK+ GLIE TDC VCL+EF+ED
Sbjct: 131 EEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEED 187
Query: 76 ESLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAPI 110
ESLRLLPKCNHAFHISCIDTWL SHTNCPLCRA I
Sbjct: 188 ESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI 222
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 119/202 (58%), Gaps = 21/202 (10%)
Query: 36 NTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
N GL +S+I SI V+KYK G ++G+DCSVCLSEF+E+ESLRLLPKCNHAFH+ CIDT
Sbjct: 113 NGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDT 172
Query: 96 WLRSHTNCPLCRAPILSGAFVAQASESEPNSNDSDSRNEIMVVNSENSSGEGSDNVGGGT 155
WL+SH+NCPLCRA ++G AS + S ++V N NS+ + T
Sbjct: 173 WLKSHSNCPLCRA-FVTGVNNPTASVGQNVS--------VVVANQSNSAHQ--------T 215
Query: 156 GEVRNGNDNNNGSLPVEDERTVDDSMKILPHLKTRNCDSGCRVLSDLAESRRMV-EEDTQ 214
G V N N G E + DS+ ++ L+ + +S R L E RR +ED+
Sbjct: 216 GSVSEINLNLAG---YESQTGDFDSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSL 272
Query: 215 PMRRSVSLDASAASMIYNAVTE 236
P+RRSVSL++ I + + E
Sbjct: 273 PIRRSVSLNSGVVVSIADVLRE 294
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 82/109 (75%), Gaps = 6/109 (5%)
Query: 30 HPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFH 89
H +W I T+GL +S I+SI V +KK G+I+GT+CSVCL+EF+EDESLRLLPKC+HAFH
Sbjct: 100 HHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFH 159
Query: 90 ISCIDTWLRSHTNCPLCRAPILSGAFVAQASESEPNSN---DSDSRNEI 135
++CIDTWL SH NCPLCRAP+L + + E +N DS+S N++
Sbjct: 160 LNCIDTWLLSHKNCPLCRAPVL---LITEPPHQETETNHQPDSESSNDL 205
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 66/77 (85%)
Query: 40 LPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLRS 99
L +S+I SI V+KY+K G +E +DCSVCLSEFQE+ESLRLLPKCNHAFH+ CIDTWL+S
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS 193
Query: 100 HTNCPLCRAPILSGAFV 116
H+NCPLCRA I++ + V
Sbjct: 194 HSNCPLCRAFIVTSSAV 210
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
Query: 30 HPIWYINT-IGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAF 88
H W ++ GL +++I+ I V KY++ G + TDCSVCL EF + ESLRLLP+C+HAF
Sbjct: 121 HESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAF 180
Query: 89 HISCIDTWLRSHTNCPLCRAPILSGAFVAQASESE---PNSNDSDSRNEIMVV 138
H CIDTWL+SH+NCPLCRA I + E E P D+ +E++VV
Sbjct: 181 HQQCIDTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGGDNTHEVVVV 233
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 86/134 (64%), Gaps = 16/134 (11%)
Query: 15 TQEDFFDED---HGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGL-IEGTDCSVCLS 70
++ED+FD G + ++ ++ G+ QS+ID++ VF YK VGL I DC VCL
Sbjct: 74 SREDYFDNVTALQGQL--QQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLC 131
Query: 71 EFQEDESLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAPILSGAFVAQASESEPNSNDSD 130
EF+ ++ LRLLPKC+HAFH+ CIDTWL SH+ CPLCR+ +LSG +S+ +
Sbjct: 132 EFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGF----------SSHHNL 181
Query: 131 SRNEIMVVNSENSS 144
S + ++V+ SE SS
Sbjct: 182 SSSYLLVLESEQSS 195
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 37 TIGLPQSVIDSIAVFKYKKDVG--LIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCID 94
T GL ++I I FK KK I GTDCS+CL EF EDESLRLLPKCNH FH+ CID
Sbjct: 125 TAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCID 184
Query: 95 TWLRSHTNCPLCRAPIL 111
WL+SH+NCPLCRA I+
Sbjct: 185 RWLKSHSNCPLCRAKII 201
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 30/228 (13%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGT--------------DCSVCLSEFQEDESLRLLPKC 84
GL +SVI +I +FK+KK +G +CSVCLSEFQ++E LR++P C
Sbjct: 98 GLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNC 157
Query: 85 NHAFHISCIDTWLRSHTNCPLCRAPI-LSGAF----VAQASESEPNSNDSDSRNEIMVVN 139
+H FHI CID WL+++ NCPLCR + +F V+ S S N NE +V+
Sbjct: 158 SHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLRGENEYVVI- 216
Query: 140 SENSSGEGSDNVGGGTGEVRNGND-NNNGSLPVED-ERTVDDSMKILPH----LKTRNCD 193
E S GSD G + G + +N+G L E+ + ++ S K L K R
Sbjct: 217 -ELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDRGGLPRKFRKLH 275
Query: 194 SGCRVLSDLAESRRMVEED---TQPMRRSVSLDASAASMIYNAVTEGV 238
+ + + RR +E QP+RRS+S+D+SA +Y AV E +
Sbjct: 276 KMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAI 323
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%)
Query: 18 DFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDES 77
+F D D +++++ GL Q++ID++ VF YK+ G E DC+VCL EF ED+
Sbjct: 97 EFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDK 156
Query: 78 LRLLPKCNHAFHISCIDTWLRSHTNCPLCRAPILS 112
LRLLP C+HAFHI CIDTWL S++ CPLCR + S
Sbjct: 157 LRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Query: 16 QEDFFDED---HGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEG-TDCSVCLSE 71
+ED+FD G + +++++ G+ QS ID++ VF YK +GL DC+VCL E
Sbjct: 83 REDYFDNVTALQGQL--QQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCE 140
Query: 72 FQEDESLRLLPKCNHAFHISCIDTWLRSHTNCPLCR 107
F+ ++ LRLLPKC+HAFH+ CIDTWL SH+ CPLCR
Sbjct: 141 FETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 114/249 (45%), Gaps = 38/249 (15%)
Query: 23 DHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKK-DVGLIE------GTDCSVCLSEFQED 75
D P++ + +N GL +S I +I VFK+KK DV E +CSVCL+EFQED
Sbjct: 86 DQNPLMIYSPHEVNR-GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQED 144
Query: 76 ESLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAPI-LSGAFVAQ--ASESEPNSNDSDSR 132
E LR++P C H FHI CID WL+ + NCPLCR + +F ++ S P N SR
Sbjct: 145 EKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSR 204
Query: 133 NEIMVVNSENSSGEGSDN----VGGGTGEVRNGNDNNNGSLPVEDERTVDD--------- 179
N N E G D+ + G N N E ER +
Sbjct: 205 NR----NLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPK 260
Query: 180 SMKILP--------HLKTRNCDSGCRVLSDLAESRRMVEE--DTQPMRRSVSLDASAASM 229
S+ LP + K R + + ++R + QP+RRS+S+D+S
Sbjct: 261 SVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQ 320
Query: 230 IYNAVTEGV 238
+Y AV E +
Sbjct: 321 LYLAVQEEI 329
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 10/94 (10%)
Query: 32 IWYINTIGLPQSVIDSIAVFKYKKDVGLI----------EGTDCSVCLSEFQEDESLRLL 81
++++N GL Q+ ID++ VF YK+ VG E DC+VCL EF E + LRLL
Sbjct: 100 LFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLL 159
Query: 82 PKCNHAFHISCIDTWLRSHTNCPLCRAPILSGAF 115
P C+HAFH++CIDTWL+S++ CPLCR + S F
Sbjct: 160 PMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGF 193
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 9/118 (7%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
GL + I+S+ F++ GL +G +CSVCLS+F++ E LRLLPKC HAFHI CID WL
Sbjct: 98 GLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLE 157
Query: 99 SHTNCPLCR--------APILSGAFVAQASESEPNSNDSDSRNEIMVVNSENSSGEGS 148
H CPLCR +L + + ++ + + DSR EI + E + +GS
Sbjct: 158 QHATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETREEDSRLEIY-IEREEGTNDGS 214
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
G+ +SVI+S+ VF++ G +G +C+VCL+ F+ E LRLLPKC HAFH+ C+DTWL
Sbjct: 120 GIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLD 179
Query: 99 SHTNCPLCRAPI----------LSGAFVAQASESEPNS--NDSDSRNEIMVVNSENSSGE 146
+H+ CPLCR + + F Q S+ E NS N+ + V+ +
Sbjct: 180 AHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRISGRHS 239
Query: 147 GSDNVGGGTGEVRNGNDNNNGSLPVEDERTVDDSMKI 183
+ E+R + + P+ R++D S+K+
Sbjct: 240 SAGERASRLNEIRTSSSYKSN--PMSFRRSLDSSLKV 274
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
GL ++ I+S+ +F++ G +G DCSVCLS+F+ E LRLLPKC HAFHI CID WL
Sbjct: 97 GLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLE 156
Query: 99 SHTNCPLCR 107
H CPLCR
Sbjct: 157 QHATCPLCR 165
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 39 GLPQSVIDSIAVFKYKKDVGL---IEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
GL S+I++ F+Y L E +CSVCL+EF++DE+LRL+PKC H FH CID
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 96 WLRSHTNCPLCRAPIL 111
WLRSHT CPLCRA ++
Sbjct: 175 WLRSHTTCPLCRADLI 190
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 39 GLPQSVIDSIAVFKYK--KDVGLIEG-TDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
GL SV+++ F Y K L +G +C++CL+EF++DE+LRLLPKC+H FH CID
Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158
Query: 96 WLRSHTNCPLCRAPILSGAFVAQASESEPNSNDSDSRNEIMVVNSE 141
WL +H CP+CRA + VA+ EP + D + +VVN E
Sbjct: 159 WLEAHVTCPVCRANLAEQ--VAEGESVEPGGTEPDLELQQVVVNPE 202
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 26 PVLDHPIWYINTIGLPQSVIDSIAVFKYKK-DVGLIEGTDCSVCLSEFQEDESLRLLPKC 84
P L H +++++ GL Q+ ID++ VF Y + L + DC+VCL+EF + + LRLLP C
Sbjct: 168 PQLQH-LFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVC 226
Query: 85 NHAFHISCIDTWLRSHTNCPLCR 107
+HAFH+ CIDTWL S++ CPLCR
Sbjct: 227 SHAFHLHCIDTWLLSNSTCPLCR 249
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 39 GLPQSVIDSIAVFKY--KKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTW 96
L Q+V+D I +F Y K E +CSVCLSEF+E++ RLLPKC H+FH+ CIDTW
Sbjct: 80 ALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTW 139
Query: 97 LRSHTNCPLCRAPI 110
RS + CPLCRAP+
Sbjct: 140 FRSRSTCPLCRAPV 153
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 10/102 (9%)
Query: 40 LPQSVIDSIAVFKYKKDVGL-IEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
+ QS ID++ + YK +GL + +DC+VCL EF ++ LRLLPKC+HAFH+ CIDTWL
Sbjct: 96 IDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLL 155
Query: 99 SHTNCPLCR--------APILSGAFVAQASESE-PNSNDSDS 131
+++ CPLCR S + + ES+ NS DSDS
Sbjct: 156 TNSTCPLCRDNLLLLGLTGTASSSTIVLVHESDGDNSQDSDS 197
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 39 GLPQSVIDSIAVFKYKKDVGL---IEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
GL SVI++ F Y L E +C VCL+EF++DE+LRL+P+C H FH CID
Sbjct: 89 GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148
Query: 96 WLRSHTNCPLCRA 108
WLRS T CPLCRA
Sbjct: 149 WLRSQTTCPLCRA 161
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 40 LPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLRS 99
L +V++ I +F Y +CSVCLSEF+ED+ R+LPKC H FH+ CIDTW RS
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 100 HTNCPLCRAPILSGAFVAQASESEP 124
++CPLCRAP+ V +E EP
Sbjct: 148 RSSCPLCRAPVQPAQPV---TEPEP 169
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 39 GLPQSVIDSIAVFKY-------KKDVGLIEGT---DCSVCLSEFQEDESLRLLPKCNHAF 88
GL SVI ++ +F Y K VG DC+VCL EF+E + +R LP C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 89 HISCIDTWLRSHTNCPLCRAPILSGA--------FVAQASESEPNSNDSDSRNEIMVVNS 140
H+ CID WLRSH NCPLCR IL A FV + S D + N I++
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPSLDDEENNAIIIRGE 239
Query: 141 ENSSGEGSDNVGGGT 155
S + + T
Sbjct: 240 ITPSRSNWNTIAADT 254
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
GL +VI S+ VF + + + +C+VCLSEF+E E+ R+LP C H FH+ CID W
Sbjct: 94 GLDPNVIKSLPVFTFSDETHK-DPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFH 152
Query: 99 SHTNCPLCRAPILSGAFV---AQASESEPN-SNDSDSRNEIMVVNSENSSGEGSDNVGGG 154
SH+ CPLCR+ + S A + A A E E + DSD ++V+ +SSG + G G
Sbjct: 153 SHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDP---VLVIEPSSSSGLTDEPHGSG 209
Query: 155 TGEV 158
+ ++
Sbjct: 210 SSQM 213
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 17/109 (15%)
Query: 43 SVIDSIAVFKY---KKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLRS 99
SV+DS+ +FK+ + + DC+VCLS+F+ ++ LRLLP C HAFH CID WL S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 100 HTNCPLCRAPILSGAFVAQASESEPNSNDSDSRNEIMVVNSENSSGEGS 148
+ CPLCR+P+ +++SD + VV S N GE S
Sbjct: 152 NQTCPLCRSPLF--------------ASESDLMKSLAVVGSNNGGGENS 186
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLI---EGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
GL + VI+S F Y + GL G +C++CL+EF+++E+LRL+P C+HAFH SCID
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 96 WLRSHTNCPLCRA 108
WL S + CP+CRA
Sbjct: 159 WLSSRSTCPVCRA 171
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
GL S+I S+ +F + L +CSVCLSEF+++ES R++P C H FH+ CID W
Sbjct: 51 GLNPSIIKSLPIFTFSAVTALF-AMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFH 109
Query: 99 SHTNCPLCRAPILSGAFVAQASESEPNSNDSDSRNEIMVVNSENSSGEGSDNVGGGTGE 157
SH++CPLCR+ I A ++S E + SD V + + EG++ G E
Sbjct: 110 SHSSCPLCRSQIEPFAGGVKSSMDEVAISISDP------VYGDTNHHEGTETTGDSVPE 162
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 17/107 (15%)
Query: 9 PPIIFATQEDFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEG------ 62
P IIF +ED D + G V+ +GL Q+VI+S F + KD
Sbjct: 83 PRIIFVAEEDNEDLEAGDVV---------VGLDQAVINSYPKFHFSKDTSAASSDGFGGG 133
Query: 63 --TDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLRSHTNCPLCR 107
T CS+CL E++E E LR++P+C H FH+ C+D WL+ + +CP+CR
Sbjct: 134 GDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCR 180
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Query: 35 INTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCID 94
++ GL + S+ + +++D +G +CS+CLSE + + RLLPKCNH+FH+ CID
Sbjct: 98 LSNTGLTSFELSSLPIVFFRQD-SCKDGLECSICLSELVKGDKARLLPKCNHSFHVECID 156
Query: 95 TWLRSHTNCPLCRAPIL-----SGAFVAQASESEPNSNDSDSRNEIMVVNSENSSGEGSD 149
W +SH+ CP+CR +L S V Q ++ N+ +++ ++ + S SS E
Sbjct: 157 MWFQSHSTCPICRNTVLGPEQASSKRVEQVPDNAENAGTTNNNHDALSQLS-TSSPEFPT 215
Query: 150 N--VGGGTGEVRNGNDN 164
N V G +V GN N
Sbjct: 216 NVLVWGRQDQVSTGNTN 232
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLI---EGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
GL + VI+S F Y + GL G +C++CLSEF++ E+LR +P C+H FH +CID
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 96 WLRSHTNCPLCRA 108
WL S + CP+CRA
Sbjct: 154 WLSSWSTCPVCRA 166
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 39 GLPQSVIDSIAVFKY----KKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCID 94
GL +V++S VF Y + +G + +C++CL+E ++ E++RLLP CNH FHI CID
Sbjct: 95 GLDNAVVESFPVFAYSSVKESKIG-SKDLECAICLNELEDHETVRLLPICNHLFHIDCID 153
Query: 95 TWLRSHTNCPLCRA 108
TWL SH CP+CR+
Sbjct: 154 TWLYSHATCPVCRS 167
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
G+ + + I V Y ++ + + T+C +CL +F E E++R+LPKCNH FH+ CIDTWL
Sbjct: 88 GIKKRALKVIPVDSYSPELKM-KATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLL 146
Query: 99 SHTNCPLCRAPIL 111
SH++CP CR +L
Sbjct: 147 SHSSCPTCRQSLL 159
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 39 GLPQSVIDSIAVFKYK--KDVGLIEG-TDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
GL I++ F Y K V + +G +C+VCL EF++DE+LRL+P C H FH C+D
Sbjct: 106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDV 165
Query: 96 WLRSHTNCPLCRAPIL 111
WL H+ CPLCRA ++
Sbjct: 166 WLSEHSTCPLCRADLV 181
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
GL + + I V Y + ++ T+C +CL +F++ E +R+LPKCNH FH+ CIDTWL
Sbjct: 88 GLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLL 147
Query: 99 SHTNCPLCRAPILSGAFVAQASESEPNSNDSDSRNEIMVV 138
S ++CP CR +L +P+ R+E MVV
Sbjct: 148 SRSSCPTCRQSLL---------LEQPSPMAVSRRDEDMVV 178
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLI---EGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
GL + +++S +F Y + GL G +C++CLSEF + E+LR +P C+H FH +CID
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 96 WLRSHTNCPLCRA 108
WL S + CP CRA
Sbjct: 154 WLSSQSTCPACRA 166
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
GL + + V +Y I T+C++CL EF + E +R+LP CNH+FH+SCIDTWL
Sbjct: 79 GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLV 138
Query: 99 SHTNCPLCRAPIL 111
SH++CP CR ++
Sbjct: 139 SHSSCPNCRHSLI 151
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 21/110 (19%)
Query: 9 PPIIFATQEDFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLI-------- 60
P IIF ++D D + G V+ GL SVI+S F + KD+ +
Sbjct: 79 PRIIFVAEDD--DLESGNVV--------VGGLDHSVINSYPKFHFTKDITAVVNGDGFHD 128
Query: 61 -EG--TDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLRSHTNCPLCR 107
EG T CS+CL E+ E+E LR++P+C H FH+ C+D WL+ + +CP+CR
Sbjct: 129 GEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCR 178
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 38 IGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWL 97
+GL + + + + V YK+ +++ + CSVCL ++Q +E L+ +P C H FH+ CID WL
Sbjct: 85 LGLSKDIREMLPVVIYKESF-IVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL 143
Query: 98 RSHTNCPLCRAPIL 111
SHT CPLCR ++
Sbjct: 144 TSHTTCPLCRLSLI 157
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 39 GLPQSVIDSIAVFKY----KKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCID 94
GL +++I+S F Y ++ +G I G +C+VC+ EF++ E+LRL+P+C H FH C+
Sbjct: 67 GLDEAIINSFPTFLYSEVKERRIG-IGGVECAVCICEFEDHETLRLMPECCHVFHADCVS 125
Query: 95 TWLRSHTNCPLCRAPI 110
WL H+ CPLCR +
Sbjct: 126 VWLSDHSTCPLCRVDL 141
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 39 GLPQSVIDSIAVFKYK--KDVGLIEGT-DCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
GL I++ F Y K + +G +C++CL+EF++DE+LRLLPKC+H FH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 96 WLRSHTNCPLCR 107
WL+ H CP+CR
Sbjct: 155 WLQGHVTCPVCR 166
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 35 INTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCID 94
++ GL ++ SI V +K +G +C+VCLS+ + + R+LP+CNH FH+ CID
Sbjct: 91 LHNAGLDSKILQSIHVVVFKC-TDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCID 149
Query: 95 TWLRSHTNCPLCRAPI 110
W +SH+ CPLCR +
Sbjct: 150 MWFQSHSTCPLCRNTV 165
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
GL + S+ V++Y K DC +CLS+F+E E+++++P C H FH+ C+DTWL
Sbjct: 115 GLDSQAVRSLPVYRYTK-AAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS 173
Query: 99 SHTNCPLCRA 108
S+ CPLCR+
Sbjct: 174 SYVTCPLCRS 183
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 38 IGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWL 97
+GL + + + + + YK+ + T CSVCL ++Q +E L+ +P C H FH+ CID WL
Sbjct: 71 LGLSKDIREMLPIVIYKESFT-VNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL 129
Query: 98 RSHTNCPLCRAPIL 111
SHT CPLCR ++
Sbjct: 130 TSHTTCPLCRLSLI 143
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 21 DEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEG-TDCSVCLSEFQEDESLR 79
D+ H P P+ N GL + V+ S+ Y D E +C++CL+EF + LR
Sbjct: 64 DQTHPP----PVAAANK-GLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELR 118
Query: 80 LLPKCNHAFHISCIDTWLRSHTNCPLCR 107
+LP+C H FH+SCIDTWL SH++CP CR
Sbjct: 119 VLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 39 GLPQSVIDSIAVF--KYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTW 96
GL VI S+ F K DV GT+C+VCLS +E ++ R+LP C H FH+SC+DTW
Sbjct: 75 GLDSLVIASLPTFVVGIKNDVA---GTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTW 131
Query: 97 LRSHTNCPLCRA 108
L + + CP+CR
Sbjct: 132 LTTQSTCPVCRT 143
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLI---EGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
G+ + VI+S F Y + G +C++CL EF+++E LR +P C+H FH +CID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 96 WLRSHTNCPLCRA 108
WL S + CP+CRA
Sbjct: 151 WLSSRSTCPVCRA 163
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIE-GTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWL 97
G+ + + V Y +++ L G +C +CLS+F E LRLLPKCNH FH+ CID WL
Sbjct: 108 GIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWL 167
Query: 98 RSHTNCPLCR 107
+ H CP CR
Sbjct: 168 QHHLTCPKCR 177
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 39 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCNHAFHISCIDTWLR 98
GL +I S VF Y GT+C++CLSEF +++++RL+ C H FH +CID W
Sbjct: 77 GLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFE 136
Query: 99 SHTNCPLCRAPILSGAFVAQASESEPNS 126
H CP+CR + G + ES N+
Sbjct: 137 LHKTCPVCRCELDPGMIGSGRLESFHNT 164
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 38 IGLPQSVIDSIAVFKYK-KDVGLIEGTD-CSVCLSEFQEDESLRLLPKCNHAFHISCIDT 95
+GL +I+S + Y KD GTD CS+CL+EF +D+++RL+ CNH+FH CID
Sbjct: 129 LGLDSKIIESFPEYPYSVKD----HGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDL 184
Query: 96 WLRSHTNCPLCR 107
W H CP+CR
Sbjct: 185 WFEGHKTCPVCR 196
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 29 DHPIWYINTIGLPQSVIDSIAVFKYKKDVGLI-EGTDCSVCLSEFQEDESLRLLPKCNHA 87
++P+ NT G+ + + S Y ++ L T+C++CLSEF +E ++LLP C+H
Sbjct: 95 NYPVRLTNT-GVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHG 153
Query: 88 FHISCIDTWLRSHTNCPLCR 107
FH+ CID WL SH++CP CR
Sbjct: 154 FHVRCIDKWLSSHSSCPTCR 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,356,844
Number of Sequences: 539616
Number of extensions: 5158247
Number of successful extensions: 33886
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 303
Number of HSP's that attempted gapping in prelim test: 23391
Number of HSP's gapped (non-prelim): 8826
length of query: 318
length of database: 191,569,459
effective HSP length: 117
effective length of query: 201
effective length of database: 128,434,387
effective search space: 25815311787
effective search space used: 25815311787
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)