Your job contains 1 sequence.
>048339
MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI
VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSW
GAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS
GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG
YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY
REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE
DEAFPVKVIESIKQYQNDVIPFLKGS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048339
(386 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370... 1463 6.9e-150 1
UNIPROTKB|Q4KBB7 - symbol:PFL_3361 "Histone deacetylase f... 533 2.4e-51 1
TIGR_CMR|SPO_3195 - symbol:SPO_3195 "histone deacetylase ... 514 2.5e-49 1
UNIPROTKB|Q5LQF5 - symbol:SPO2535 "Histone deacetylase/Ac... 445 5.2e-42 1
TIGR_CMR|SPO_2535 - symbol:SPO_2535 "histone deacetylase/... 445 5.2e-42 1
TIGR_CMR|SPO_A0096 - symbol:SPO_A0096 "histone deacetylas... 431 1.6e-40 1
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 401 1.9e-39 2
UNIPROTKB|Q604Q2 - symbol:MCA2486 "Histone deacetylase/Ac... 419 2.9e-39 1
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370... 413 1.3e-38 1
UNIPROTKB|Q3Z9M2 - symbol:DET0330 "Histone deacetylase fa... 410 2.6e-38 1
TIGR_CMR|DET_0330 - symbol:DET_0330 "histone deacetylase ... 410 2.6e-38 1
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 416 1.0e-37 1
POMBASE|SPBC800.03 - symbol:clr3 "histone deacetylase (cl... 387 1.5e-37 2
TAIR|locus:2159461 - symbol:HDA18 "AT5G61070" species:370... 406 2.7e-37 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 404 1.4e-36 1
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 393 2.1e-35 1
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 393 2.1e-35 1
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 394 2.4e-35 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 379 2.7e-35 2
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 379 2.7e-35 2
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 392 3.8e-35 1
TAIR|locus:2119201 - symbol:HDA14 "AT4G33470" species:370... 374 1.7e-34 1
UNIPROTKB|Q4K950 - symbol:aphA_2 "Acetylpolyamine aminohy... 372 2.8e-34 1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 383 3.6e-34 1
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 381 5.7e-34 1
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 380 8.3e-34 1
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 380 8.5e-34 1
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 341 1.5e-33 2
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 376 2.0e-33 1
ASPGD|ASPL0000014944 - symbol:hdaA species:162425 "Emeric... 371 2.8e-33 1
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 374 3.0e-33 1
UNIPROTKB|Q969S8 - symbol:HDAC10 "Histone deacetylase 10"... 367 4.9e-33 1
UNIPROTKB|Q4KAJ1 - symbol:aphA_1 "Acetylpolyamine aminohy... 359 6.7e-33 1
UNIPROTKB|F1S1J4 - symbol:HDAC5 "Uncharacterized protein"... 346 1.1e-32 2
UNIPROTKB|Q4K3I0 - symbol:aphA_3 "Acetylpolyamine aminohy... 356 1.4e-32 1
MGI|MGI:1333784 - symbol:Hdac5 "histone deacetylase 5" sp... 355 1.7e-32 2
UNIPROTKB|Q9UQL6 - symbol:HDAC5 "Histone deacetylase 5" s... 354 1.7e-32 2
UNIPROTKB|Q0VD49 - symbol:HDAC10 "Uncharacterized protein... 361 2.2e-32 1
UNIPROTKB|F1PK81 - symbol:HDAC7 "Uncharacterized protein"... 319 2.4e-32 3
UNIPROTKB|H9KZJ3 - symbol:HDAC10 "Uncharacterized protein... 359 2.6e-32 1
UNIPROTKB|J9P9N5 - symbol:HDAC5 "Uncharacterized protein"... 351 3.3e-32 2
UNIPROTKB|F1LM64 - symbol:Hdac5 "Protein Hdac5" species:1... 348 3.4e-32 2
UNIPROTKB|F1LSL9 - symbol:Hdac5 "Protein Hdac5" species:1... 348 3.4e-32 2
UNIPROTKB|F1P6I3 - symbol:HDAC5 "Uncharacterized protein"... 351 3.6e-32 2
TIGR_CMR|SPO_2002 - symbol:SPO_2002 "acetylpolyamine amin... 352 3.7e-32 1
UNIPROTKB|E1C7C0 - symbol:HDAC9 "Uncharacterized protein"... 352 3.9e-32 2
UNIPROTKB|F1MNA5 - symbol:HDAC5 "Uncharacterized protein"... 350 4.7e-32 2
UNIPROTKB|Q9UKV0 - symbol:HDAC9 "Histone deacetylase 9" s... 350 5.2e-32 2
UNIPROTKB|Q80ZH1 - symbol:HDAC5 "Histone deacetylase 5" s... 349 5.7e-32 2
UNIPROTKB|Q5R902 - symbol:HDAC5 "Histone deacetylase 5" s... 352 7.4e-32 2
TIGR_CMR|CHY_0263 - symbol:CHY_0263 "histone deacetylase ... 349 7.7e-32 1
UNIPROTKB|F6X8E7 - symbol:HDAC9 "Uncharacterized protein"... 348 8.1e-32 2
UNIPROTKB|F5GX36 - symbol:HDAC4 "Histone deacetylase 4" s... 335 9.3e-32 2
UNIPROTKB|E2RSA8 - symbol:HDAC10 "Uncharacterized protein... 355 9.9e-32 1
ZFIN|ZDB-GENE-061013-95 - symbol:hdac4 "histone deacetyla... 338 1.5e-31 2
UNIPROTKB|F1NES1 - symbol:HDAC4 "Histone deacetylase 4" s... 341 1.6e-31 2
UNIPROTKB|G4NCI1 - symbol:MGG_01076 "Histone deacetylase ... 354 1.9e-31 1
UNIPROTKB|F1NP26 - symbol:HDAC4 "Histone deacetylase 4" s... 340 2.2e-31 2
MGI|MGI:2158340 - symbol:Hdac10 "histone deacetylase 10" ... 351 2.7e-31 1
UNIPROTKB|F1MYR0 - symbol:HDAC4 "Uncharacterized protein"... 339 3.0e-31 2
UNIPROTKB|F1LQG9 - symbol:Hdac5 "Protein Hdac5" species:1... 352 3.9e-31 1
UNIPROTKB|P83038 - symbol:HDAC4 "Histone deacetylase 4" s... 337 4.8e-31 2
UNIPROTKB|F1LSN5 - symbol:F1LSN5 "Uncharacterized protein... 322 4.9e-31 2
UNIPROTKB|H9KZE7 - symbol:H9KZE7 "Uncharacterized protein... 328 6.5e-31 2
MGI|MGI:3036234 - symbol:Hdac4 "histone deacetylase 4" sp... 335 7.7e-31 2
UNIPROTKB|F1N616 - symbol:HDAC7 "Uncharacterized protein"... 320 7.8e-31 2
UNIPROTKB|P56524 - symbol:HDAC4 "Histone deacetylase 4" s... 335 7.9e-31 2
RGD|619979 - symbol:Hdac4 "histone deacetylase 4" species... 334 9.9e-31 2
UNIPROTKB|Q8WUI4 - symbol:HDAC7 "Histone deacetylase 7" s... 322 1.1e-30 2
UNIPROTKB|F1PRU6 - symbol:HDAC4 "Uncharacterized protein"... 333 1.3e-30 2
MGI|MGI:1891835 - symbol:Hdac7 "histone deacetylase 7" sp... 318 1.3e-30 2
UNIPROTKB|J3KPH8 - symbol:HDAC7 "Histone deacetylase 7" s... 322 1.4e-30 2
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote... 337 1.4e-30 1
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr... 337 1.4e-30 1
UNIPROTKB|F1NWX8 - symbol:HDAC4 "Histone deacetylase 4" s... 330 2.6e-30 2
UNIPROTKB|I3LM52 - symbol:HDAC4 "Uncharacterized protein"... 327 5.1e-30 2
UNIPROTKB|F1RXT2 - symbol:LOC100518786 "Uncharacterized p... 334 2.0e-29 1
UNIPROTKB|I3LDD6 - symbol:LOC100518786 "Uncharacterized p... 334 2.0e-29 1
TIGR_CMR|SPO_0250 - symbol:SPO_0250 "histone deacetylase ... 324 3.4e-29 1
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 331 5.2e-29 1
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote... 315 3.1e-28 1
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ... 315 3.1e-28 1
WB|WBGene00001837 - symbol:hda-4 species:6239 "Caenorhabd... 324 4.4e-28 1
UNIPROTKB|E2RS82 - symbol:HDAC10 "Uncharacterized protein... 317 6.8e-28 1
WB|WBGene00001838 - symbol:hda-10 species:6239 "Caenorhab... 311 2.3e-27 1
RGD|1305874 - symbol:Hdac10 "histone deacetylase 10" spec... 312 3.2e-27 1
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica... 306 3.2e-27 1
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec... 306 3.2e-27 1
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 305 3.5e-27 1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 305 3.5e-27 1
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c... 303 5.7e-27 1
FB|FBgn0041210 - symbol:HDAC4 "HDAC4" species:7227 "Droso... 301 2.8e-26 2
DICTYBASE|DDB_G0280195 - symbol:hdaC "type-2 histone deac... 292 3.2e-26 2
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac... 290 1.4e-25 1
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 288 2.2e-25 1
SGD|S000003162 - symbol:HOS2 "Histone deacetylase and sub... 287 5.3e-25 1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe... 283 7.6e-25 1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp... 280 1.6e-24 1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie... 280 1.6e-24 1
TIGR_CMR|SPO_2177 - symbol:SPO_2177 "acetoin utilization ... 278 2.6e-24 1
WARNING: Descriptions of 108 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 261/372 (70%), Positives = 321/372 (86%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
++VFW +GML HD +G+FDTG+DPGFL+VLEKHPEN+DR++N++SIL+RGPI+P+++W
Sbjct: 6 VDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHVNWF 65
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMK 135
+G+PA + +LL FHT +YI +LVEADK+G + + GT ++PGSW AALLA GTTLSAM+
Sbjct: 66 TGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPGSWEAALLAAGTTLSAMQ 125
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
H+LD HGKIAYALVRPPGHH+QPT ADGYCFLNNA LAV+LALNSG C +V VIDIDVHY
Sbjct: 126 HILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHY 185
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGTAEGFY S+KVLT+SLHMNHGSWG SHPQ G++DELGE G GYNLN+PLPNGTGDR
Sbjct: 186 GNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDR 245
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY +AM ELVVPA+++F P+M+VLVVGQDSSAFDPNGRQ LTM+GYR +G+I+R +A+ +
Sbjct: 246 GYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEH 305
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
S GRLL+VQEGGYHVTY+AYCLHA LEGVL +P LSDPIAYYPE+EA V +ESIK
Sbjct: 306 SHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEEEANAVAAVESIKT 365
Query: 375 YQNDVIPFLKGS 386
Y + +PFL+G+
Sbjct: 366 YHTEFVPFLRGT 377
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 116/306 (37%), Positives = 171/306 (55%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE R+K+++ + ++ + S A LL H+ Y+ AGG +
Sbjct: 47 PETKRRLKSLMDV---SGLTRQLHLRSAAAATEDDLLRVHSAAYLQRFKALSDAGGGHLG 103
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D + PGS+ A L+ G ++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 104 DEAPVGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCTRDQAMGFCFLANI 163
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+A++ A G GKV VID DVH+GNGT F VLT+SLH + G + P + G
Sbjct: 164 AIAIEAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQD-GCFPPGY---GG 219
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
+ G G G G N+NIPL G+G Y++AM +V+PA+++FEP +I++ G D++A DP
Sbjct: 220 EQDRGRGAGLGCNINIPLLPGSGHDAYLYAMQHIVIPALERFEPELIIVACGYDANAVDP 279
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
R L D +REM + ++ A+R GRL++V EGGY Y +C ATLE + + A
Sbjct: 280 LARMLLHSDSFREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFCGLATLEALSGIRTA 339
Query: 350 LLSDPI 355
+ +DP+
Sbjct: 340 V-ADPM 344
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 112/312 (35%), Positives = 174/312 (55%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L + PE R+KN++ + G S + +G A I +L H YI+E +GG
Sbjct: 38 LPEAPETKRRLKNLIEVT--GLHSD-LEMVTGGSATIEDVLRVHPRSYIDEFRRLSDSGG 94
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T PG++ A+L+ G + A++ V+ G + AYAL RPPGHH P +G+C
Sbjct: 95 GELGLRTPFGPGAFEIAMLSAGLVIDAVEGVVQGRYRNAYALSRPPGHHCLPDWPNGFCL 154
Query: 167 LNNAGLAVQLALNSGC-GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A G GKV V+D DVH+GNGT +Y + VLTIS+H + +P
Sbjct: 155 LANIAIAIEAAKAKGLLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQDR-----CYP 209
Query: 226 QN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
+ G++D+ G+G G G+N+NIPLP G G YV A L++P ++ F+ +++++ G D+
Sbjct: 210 HDTGSIDDQGKGAGLGFNMNIPLPPGCGHNAYVEATERLIIPKLKAFDADLVIIACGFDA 269
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
FDP R + + +REM R V ++D G+L+ EGGY Y +C HA LE +
Sbjct: 270 GGFDPLARMMCSAETFREMTRRVMQVSD----GKLVAAHEGGYSELYVPFCGHAMLEEMS 325
Query: 345 NLPLALLSDPIA 356
+ +DP+A
Sbjct: 326 GSTIHA-ADPLA 336
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 114/310 (36%), Positives = 162/310 (52%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
++PE R++N+V G + ++S A + H +I+ L + GG
Sbjct: 45 ENPETKRRLQNLVQAT--G-LWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGD 101
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T P S A LAVG + AM V+ G + AY L RPPGHHA P +A G+C L
Sbjct: 102 AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLA 161
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-Q 226
NA L ++ + G ++ V+D DVH+GNGT F VLTISLH ++ P
Sbjct: 162 NAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQDN-----LFPLD 216
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G + G G N+N+PLP G+G Y A ++V+PA+ F P +IVL G D+SA
Sbjct: 217 SGGIGVKGAGNS---NINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASA 273
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP G L+ + +R M R V +LAD++ GR+++ EGGY Y YC A LE L+
Sbjct: 274 VDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYCGLAVLEE-LSG 332
Query: 347 PLALLSDPIA 356
L DP A
Sbjct: 333 ASDTLPDPYA 342
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 114/310 (36%), Positives = 162/310 (52%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
++PE R++N+V G + ++S A + H +I+ L + GG
Sbjct: 45 ENPETKRRLQNLVQAT--G-LWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGD 101
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T P S A LAVG + AM V+ G + AY L RPPGHHA P +A G+C L
Sbjct: 102 AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLA 161
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-Q 226
NA L ++ + G ++ V+D DVH+GNGT F VLTISLH ++ P
Sbjct: 162 NAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQDN-----LFPLD 216
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G + G G N+N+PLP G+G Y A ++V+PA+ F P +IVL G D+SA
Sbjct: 217 SGGIGVKGAGNS---NINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASA 273
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP G L+ + +R M R V +LAD++ GR+++ EGGY Y YC A LE L+
Sbjct: 274 VDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYCGLAVLEE-LSG 332
Query: 347 PLALLSDPIA 356
L DP A
Sbjct: 333 ASDTLPDPYA 342
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 104/297 (35%), Positives = 150/297 (50%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE+ R K+++ + ++ +S S P + H+ Y++ AGG
Sbjct: 19 PESKRRFKSLMDV---SGLTAQLSVQSAEPVTETDMARVHSEAYLDRFKTLSDAGGGNAG 75
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
+ + GS+ A L+ G A+ V+DG AYAL RPPGHHA + G+C L N
Sbjct: 76 EFSPFGSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPGHHAMRDGSMGFCLLANI 135
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+A++ A G +V V+D DVH+GNGT + FY VLTIS+H + P P +G+
Sbjct: 136 AIAIEAARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQENCF--P--PGSGS 191
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
E G G G G NLN+ L G G + Y+ AM LV+PA+ F P +I++ G D++ FDP
Sbjct: 192 GSERGAGAGEGANLNVNLLPGAGHQSYIDAMDILVLPALHAFRPELIIVACGLDANNFDP 251
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA---TLEGV 343
R + + R V A+ GGRL+ EGGY +C H TL GV
Sbjct: 252 LSRMTAHSGTFGYLTRAVMGAANDLCGGRLVCAHEGGYAEAVVPFCAHEVVRTLAGV 308
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 401 (146.2 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 99/307 (32%), Positives = 167/307 (54%)
Query: 85 QLLSFHTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVL 138
++L HT +++ + +K + + D N S+ +A L G + A K V+
Sbjct: 130 EILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVV 189
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYG 195
+G K + A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+G
Sbjct: 190 EGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHG 249
Query: 196 NGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGD 253
NGT + FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD
Sbjct: 250 NGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGD 308
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC-LTMDGYREMGRIVRSLAD 312
Y+ A ++V+P ++F+P+++++ G D++ D G QC +T Y M +++SLA
Sbjct: 309 AEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIG-QCHVTPSCYGHMTHMLKSLAR 367
Query: 313 RYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIE 370
G L +V EGGY++ A + + ++ P L DP++ P+ E + KVI
Sbjct: 368 ----GNLCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLSD-PKPEVIEMIDKVIR 422
Query: 371 SIKQYQN 377
+Y N
Sbjct: 423 LQSKYWN 429
Score = 49 (22.3 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 43 FLEVLEKHPENSDRIKNIVSIL-KRGPIS-PYISWHSGIP---AQIP-------QLLSFH 90
+ E ++ HPE+ RI I IL + G I+ P +S + +IP ++L H
Sbjct: 76 YFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEVH 135
Query: 91 TPDYINELVEA 101
T +++ E +E+
Sbjct: 136 TKEHL-EFIES 145
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 105/281 (37%), Positives = 146/281 (51%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-DKAGGKM 108
HPE S R+ I S L P + A I +L H+ +I + + + G
Sbjct: 20 HPEGSVRLAAIESALA-APEFRSLRRLEAPRADISRLELVHSRRHIERVFASLPQTGHHF 78
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
V TV++P S AAL AVG A+ V+ + A+ VRPPGHHA+P A G+C N
Sbjct: 79 VDADTVVSPESGEAALHAVGAVCLAVDEVIGKRARNAFCAVRPPGHHAEPDAAMGFCLFN 138
Query: 169 NAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A AL N G ++ ++D DVH+GNGT F R+ +VL +S H P +P
Sbjct: 139 NIAIAAAHALANHGLQRIAIVDFDVHHGNGTQAAFRRNPQVLYVSTHQY-----PWYPGT 193
Query: 228 GTVDELGEGEGFGYNL-NIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G+ +E G G NL NIPLP GT Y A+T +PAI +F P ++++ G D+
Sbjct: 194 GSAEETGVG-----NLVNIPLPAGTDSAAYREAVTATALPAIDRFRPELVLISAGFDAHR 248
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP LT D Y + + LADR+SGGR++ EGGY
Sbjct: 249 DDPLADLALTEDDYGWITAELMKLADRHSGGRIVSALEGGY 289
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 103/300 (34%), Positives = 151/300 (50%)
Query: 38 GFDPGFL-----EV-LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSF-H 90
GFD L EV + HPE DR++ I + L + P Q L H
Sbjct: 153 GFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVH 212
Query: 91 TPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
T ++++ + + T N S AA LA G + G K +ALVR
Sbjct: 213 TSEHVDAVDTTSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALVR 272
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLT 210
PPGHHA A G+C NNA +A +A +G KV+++D DVH+GNGT E F ++ VL
Sbjct: 273 PPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLY 332
Query: 211 ISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQ 269
ISLH + G G +P G DE+G G GY +N+P G GD+ Y+ A +V+P
Sbjct: 333 ISLHRHEG--GNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIAS 390
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
F P+ +++ G D++ DP G +T GY M +++ L GG++L++ EGGY++
Sbjct: 391 AFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLC----GGKMLVILEGGYNL 446
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 104/315 (33%), Positives = 150/315 (47%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H EN DR+ I+ + + + + +L FHT YI+ + E +GG +
Sbjct: 19 HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFHTRKYISRVEEVGFSGGGWL 78
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
TV++ S+ AL AVG L + VL G + A+ + RPPGHHA P + G+C NN
Sbjct: 79 DQDTVISVDSYETALYAVGGVLEGVDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNN 138
Query: 170 AGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
L ALN +V V+D DVH+GNG +V IS H H P G
Sbjct: 139 VALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQIH-----HFPFTG 193
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D +G F LNIPLP G GD Y +L+ P ++K P +I++ G D+ D
Sbjct: 194 --DSCEDGP-FQNILNIPLPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFAD 250
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
G CL+ G+ + R ++ AD GG+++ EGGYH A + A+L +L+
Sbjct: 251 DMGEMCLSQQGFAGITRALKKTADEVCGGKMVFSLEGGYHYLGLAESVGASLAVLLD--- 307
Query: 349 ALLSDPIAYYPEDEA 363
L P PE+ A
Sbjct: 308 EALPPPNTKAPEETA 322
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 104/315 (33%), Positives = 150/315 (47%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H EN DR+ I+ + + + + +L FHT YI+ + E +GG +
Sbjct: 19 HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFHTRKYISRVEEVGFSGGGWL 78
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
TV++ S+ AL AVG L + VL G + A+ + RPPGHHA P + G+C NN
Sbjct: 79 DQDTVISVDSYETALYAVGGVLEGVDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNN 138
Query: 170 AGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
L ALN +V V+D DVH+GNG +V IS H H P G
Sbjct: 139 VALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQIH-----HFPFTG 193
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D +G F LNIPLP G GD Y +L+ P ++K P +I++ G D+ D
Sbjct: 194 --DSCEDGP-FQNILNIPLPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFAD 250
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
G CL+ G+ + R ++ AD GG+++ EGGYH A + A+L +L+
Sbjct: 251 DMGEMCLSQQGFAGITRALKKTADEVCGGKMVFSLEGGYHYLGLAESVGASLAVLLD--- 307
Query: 349 ALLSDPIAYYPEDEA 363
L P PE+ A
Sbjct: 308 EALPPPNTKAPEETA 322
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 416 (151.5 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 110/338 (32%), Positives = 169/338 (50%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALAS----GRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 381 (139.2 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 94/281 (33%), Positives = 145/281 (51%)
Query: 85 QLLSFHTPDYINELVEA-----DKAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHV 137
++L HT ++ L E D+ ++ D ++P ++ +LLA G+T+ + H+
Sbjct: 170 EILRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHL 229
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGN 196
+ G + A++RPPGHHA +GYCF NN LA Q AL+ ++++ID DVH+G
Sbjct: 230 VAGKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQ 289
Query: 197 GTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG-DR 254
GT FY +V+ S+H HGS+ P H +G G G GYN N+PL N TG
Sbjct: 290 GTQRFFYNDPRVVYFSIHRFEHGSFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTN 347
Query: 255 G-YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
G Y+ +L++P +F+P +I++ G D++ P G +T Y + + LAD
Sbjct: 348 GDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD- 406
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
R+ +V EGGY CL + EG +LL DP
Sbjct: 407 ---ARVAVVLEGGY-------CLDSLAEGAALTLRSLLGDP 437
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 387 (141.3 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 100/322 (31%), Positives = 162/322 (50%)
Query: 44 LEVLEKHPENSDRIKNIVSILKR-GPISPYISWHS---GIPAQ---IPQLLSFHTPDYIN 96
L ++ HPE+ R+ + +K+ G +S S IPA+ + +LL H+ + +
Sbjct: 71 LSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYD 130
Query: 97 ELVEADK------AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
+ +K A + + D N S A LA G+ + V+ G K A+A+VR
Sbjct: 131 RVTNTEKMSHEDLANLEKISDSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVR 190
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK---VVVIDIDVHYGNGTAEGFYRSNK 207
PPGHHA+P G+C NN + + L K V+++D D+H+GNGT FY
Sbjct: 191 PPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPN 250
Query: 208 VLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVV 265
VL +SLH +G + P G + GEG G G +NIP G GD Y++A +V+
Sbjct: 251 VLYVSLHRYENGRFYPG-TNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVM 309
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P +F+P+++++ G D++A D G+ LT Y M +++ LAD G++ I EG
Sbjct: 310 PVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLAD----GKVFISLEG 365
Query: 326 GYHVTYSAYCLHATLEGVLNLP 347
GY++ + A + +L +P
Sbjct: 366 GYNLDSISTSALAVAQSLLGIP 387
Score = 45 (20.9 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 343 VLNLPLALLSDPIAYYPE 360
VLNL +LL DP++ Y E
Sbjct: 503 VLNLNDSLLVDPVSLYVE 520
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 406 (148.0 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 107/343 (31%), Positives = 175/343 (51%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G D E DRI+ I L+ ++
Sbjct: 60 VGLVYDETMCKHDTPNGKVDV--------------ECPDRIRVIWEKLQLAGVTQRCVVL 105
Query: 77 SGIPAQIPQLLSFHTPDYINELVEA------DKAGGKMVC--DGTVLNPGSWGAALLAVG 128
G A+ L HT ++N LV++ D K+ D LN GS AA LA G
Sbjct: 106 GGSKAEDKHLKLVHTKKHVN-LVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAG 164
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V +G +A+VRPPGHHA+ A G+C NN +A LN K
Sbjct: 165 SVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKK 224
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D D+H+GNGT + F++ ++VL S+H + HGS+ P +G + +GEG G G+N+
Sbjct: 225 ILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYP-FGDDGDFNMVGEGPGEGFNI 283
Query: 244 NIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P G GD Y+ +++P ++F+P++I+L G D++ DP G C+T GY
Sbjct: 284 NVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSV 343
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHVTY----SAYCLHATLE 341
M ++ L + ++ G++++ EGGY++ S C+ LE
Sbjct: 344 M---LKKLME-FAHGKIVLALEGGYNLESLGKSSLACVQVLLE 382
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 404 (147.3 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 105/340 (30%), Positives = 166/340 (48%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D N TG L GF+ E V HPE+SDRI I L + I +
Sbjct: 1 MLFEDRQKNRSTGPTLI--GFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCT 58
Query: 75 WHSG-IPAQIPQLLSFHTPDYINELVEADKAGGKMV---C---DGTVLNPGSWGAALLAV 127
+ + L H + +L+E++K + + C D + S A V
Sbjct: 59 VLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQCEKYDSVFMTENSMKVAKDGV 118
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
++ +A+VRPPGHHA G+C NN A + A SG ++++
Sbjct: 119 ACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFSGAERILI 178
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D+DVH+G+GT FY +VL S+H + HG + P P++ D +G G+G GYN N+
Sbjct: 179 VDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESD-FDHIGSGKGLGYNANLA 237
Query: 247 LPNGTG--DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMG 304
L N TG D Y+ + +++P +F+P+ +++ G D+ DP G CLT DGY +
Sbjct: 238 L-NETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHIL 296
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
++SLA GR+L+V EGGY+ SA + + +L
Sbjct: 297 YHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 332
Score = 340 (124.7 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 105/371 (28%), Positives = 175/371 (47%)
Query: 35 FDTGFDPGF-LEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTP 92
F+ G D F LE + HPE R + I+ L+ G + + + A ++ HT
Sbjct: 431 FNEGDDAHFDLEE-DNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTK 489
Query: 93 DYINELVEADKAGGKMVCD-------GTVLNPGSWGAALLAVGTTLSAMKHVL--DGHGK 143
+ L + + + + L + A AVG L ++ + D +
Sbjct: 490 KMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQR 549
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGF 202
A +VRPPGHHA + + G+C NN +A + A K V+++D DVH+GNGT E F
Sbjct: 550 NALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIF 609
Query: 203 YRSNKVLTISLHMNH-GSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
Y + V+ +S+H + G++ P P++ ++GEG G G ++N+P GD Y A
Sbjct: 610 YEDSNVMYMSIHRHDKGNFYPIGEPKD--YSDVGEGAGEGMSVNVPFSGVQMGDNEYQMA 667
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F P+++++ G D++ DP G +T + + M + SLA GGR+
Sbjct: 668 FQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLA----GGRI 723
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLP-LALL---SDPIAYYPED-EAFPVKVIESIKQ 374
+ V EGGY++T + A E + N L L + A P+ E+ +K I +
Sbjct: 724 ITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCA 783
Query: 375 YQNDVIPFLKG 385
Q LKG
Sbjct: 784 VQQKYWSILKG 794
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 393 (143.4 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 105/342 (30%), Positives = 166/342 (48%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D N TG L GF+ E V HPE+SDRI I L + I +
Sbjct: 1 MLFEDRQKNRSTGPTLI--GFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCT 58
Query: 75 WHSG-IPAQIPQLLSFHTPDYINELVEADKAGGKMV---C---DGTVLNP--GSWGAALL 125
+ + L H + +L+E++K + + C D + S A
Sbjct: 59 VLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQCEKYDSVFMTEFQNSMKVAKD 118
Query: 126 AVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKV 185
V ++ +A+VRPPGHHA G+C NN A + A SG ++
Sbjct: 119 GVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFSGAERI 178
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D+DVH+G+GT FY +VL S+H + HG + P P++ D +G G+G GYN N
Sbjct: 179 LIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESD-FDHIGSGKGLGYNAN 237
Query: 245 IPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
+ L N TG D Y+ + +++P +F+P+ +++ G D+ DP G CLT DGY
Sbjct: 238 LAL-NETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSH 296
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ ++SLA GR+L+V EGGY+ SA + + +L
Sbjct: 297 ILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 334
Score = 340 (124.7 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 105/371 (28%), Positives = 175/371 (47%)
Query: 35 FDTGFDPGF-LEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTP 92
F+ G D F LE + HPE R + I+ L+ G + + + A ++ HT
Sbjct: 433 FNEGDDAHFDLEE-DNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTK 491
Query: 93 DYINELVEADKAGGKMVCD-------GTVLNPGSWGAALLAVGTTLSAMKHVL--DGHGK 143
+ L + + + + L + A AVG L ++ + D +
Sbjct: 492 KMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQR 551
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGF 202
A +VRPPGHHA + + G+C NN +A + A K V+++D DVH+GNGT E F
Sbjct: 552 NALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIF 611
Query: 203 YRSNKVLTISLHMNH-GSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
Y + V+ +S+H + G++ P P++ ++GEG G G ++N+P GD Y A
Sbjct: 612 YEDSNVMYMSIHRHDKGNFYPIGEPKD--YSDVGEGAGEGMSVNVPFSGVQMGDNEYQMA 669
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F P+++++ G D++ DP G +T + + M + SLA GGR+
Sbjct: 670 FQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLA----GGRI 725
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLP-LALL---SDPIAYYPED-EAFPVKVIESIKQ 374
+ V EGGY++T + A E + N L L + A P+ E+ +K I +
Sbjct: 726 ITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCA 785
Query: 375 YQNDVIPFLKG 385
Q LKG
Sbjct: 786 VQQKYWSILKG 796
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 393 (143.4 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 105/342 (30%), Positives = 166/342 (48%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D N TG L GF+ E V HPE+SDRI I L + I +
Sbjct: 1 MLFEDRQKNRSTGPTLI--GFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCT 58
Query: 75 WHSG-IPAQIPQLLSFHTPDYINELVEADKAGGKMV---C---DGTVLNP--GSWGAALL 125
+ + L H + +L+E++K + + C D + S A
Sbjct: 59 VLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQCEKYDSVFMTEFQNSMKVAKD 118
Query: 126 AVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKV 185
V ++ +A+VRPPGHHA G+C NN A + A SG ++
Sbjct: 119 GVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFSGAERI 178
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D+DVH+G+GT FY +VL S+H + HG + P P++ D +G G+G GYN N
Sbjct: 179 LIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESD-FDHIGSGKGLGYNAN 237
Query: 245 IPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
+ L N TG D Y+ + +++P +F+P+ +++ G D+ DP G CLT DGY
Sbjct: 238 LAL-NETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSH 296
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ ++SLA GR+L+V EGGY+ SA + + +L
Sbjct: 297 ILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 334
Score = 340 (124.7 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 105/371 (28%), Positives = 175/371 (47%)
Query: 35 FDTGFDPGF-LEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTP 92
F+ G D F LE + HPE R + I+ L+ G + + + A ++ HT
Sbjct: 433 FNEGDDAHFDLEE-DNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTK 491
Query: 93 DYINELVEADKAGGKMVCD-------GTVLNPGSWGAALLAVGTTLSAMKHVL--DGHGK 143
+ L + + + + L + A AVG L ++ + D +
Sbjct: 492 KMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQR 551
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGF 202
A +VRPPGHHA + + G+C NN +A + A K V+++D DVH+GNGT E F
Sbjct: 552 NALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIF 611
Query: 203 YRSNKVLTISLHMNH-GSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
Y + V+ +S+H + G++ P P++ ++GEG G G ++N+P GD Y A
Sbjct: 612 YEDSNVMYMSIHRHDKGNFYPIGEPKD--YSDVGEGAGEGMSVNVPFSGVQMGDNEYQMA 669
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F P+++++ G D++ DP G +T + + M + SLA GGR+
Sbjct: 670 FQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLA----GGRI 725
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLP-LALL---SDPIAYYPED-EAFPVKVIESIKQ 374
+ V EGGY++T + A E + N L L + A P+ E+ +K I +
Sbjct: 726 ITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCA 785
Query: 375 YQNDVIPFLKG 385
Q LKG
Sbjct: 786 VQQKYWSILKG 796
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 394 (143.8 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 99/338 (29%), Positives = 171/338 (50%)
Query: 48 EKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKA 104
+ PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E +
Sbjct: 117 DSFPEGPERLHAIKEQLIQDGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNE 175
Query: 105 GGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
G + D L+P S+ A LA G+ L + VL + A+VRPPGHHAQ ++
Sbjct: 176 GELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLRNEIRNGMAIVRPPGHHAQHSL 235
Query: 161 ADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
DGYC N+ +A + A +V+++D DVH+G GT F + VL S+H G
Sbjct: 236 MDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQG 295
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIV 277
+ P H + +G G+G GY +N+P G D Y+ A L++P +F+P +++
Sbjct: 296 RFWP-HLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIAAFLRLLLPVALEFQPQLVL 354
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G D+ DP G T G+ ++ ++ LA GG+L++ EGGY++ A +
Sbjct: 355 VAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLA----GGKLILSLEGGYNLRALAEGVS 410
Query: 338 ATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
A+L +L P +L P A P +A +E+++ +
Sbjct: 411 ASLHTLLGDPCPILESPSAPCPSAQASLFCALEALEPF 448
Score = 359 (131.4 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 93/314 (29%), Positives = 162/314 (51%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE R+ I+ L+ ++ PA +LL+ H+ +Y+ L +K + +
Sbjct: 513 HPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHSAEYVGRLRATEKMKTREL 572
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + P ++ A LA G+ ++ VL A+VRPPGHHA+ A G
Sbjct: 573 HREGSNFDSIYICPSTFACAQLATGSVCRLVEAVLAREVLNGTAVVRPPGHHAERDAACG 632
Query: 164 YCFLNNAGLAVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A++ +++++D DVH+GNGT F VL ISLH +HG++
Sbjct: 633 FCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTF 692
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G+ G G+ +N+ NG GD Y+ A LV+P +F P ++++
Sbjct: 693 FPMGDE-GASSQVGQAAGTGFTVNVAW-NGPRVGDADYLAAWHRLVLPIAYEFNPELVLV 750
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ +GY + ++ LA+ GR++++ EGGY++T + + A
Sbjct: 751 SAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLAN----GRVVLILEGGYNLTSISESMAA 806
Query: 339 TLEGVLNLPLALLS 352
+L P LL+
Sbjct: 807 CTRSLLGDPPPLLT 820
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 379 (138.5 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 88/279 (31%), Positives = 156/279 (55%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +N S+ +A L+ G T+ A K V++G K + A+VRPPGHHA+P G+C +N
Sbjct: 223 DSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNV 282
Query: 171 GLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQ 226
+A + L + ++V++D D+H+GNGT + FY +VL ISLH +G + P +
Sbjct: 283 AVAAKNMLKNYPESVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPG-TK 341
Query: 227 NGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G ++++GEG G G+ +NIP +G D YV+A +++ P I +F+P++I++ G D++
Sbjct: 342 YGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAA 401
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
D G +T GY M ++ +A G+L ++ EGGY++ + A + ++
Sbjct: 402 DGDVIGACHVTPAGYGYMTHTLKGIAR----GKLAVILEGGYNLDSISKSALAVAKVLVG 457
Query: 346 LPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
P + I P+ EA ++V++ + + Q+ L+
Sbjct: 458 EPP---ENTITLRPQAEA--IEVVDEVIKIQSKYFKSLR 491
Score = 37 (18.1 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 43 FLEVLEKHPENSDRIKNI 60
+ E ++ HPE+ RI I
Sbjct: 137 YSEYIDPHPEDPRRIYRI 154
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 379 (138.5 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 88/279 (31%), Positives = 156/279 (55%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +N S+ +A L+ G T+ A K V++G K + A+VRPPGHHA+P G+C +N
Sbjct: 223 DSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNV 282
Query: 171 GLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQ 226
+A + L + ++V++D D+H+GNGT + FY +VL ISLH +G + P +
Sbjct: 283 AVAAKNMLKNYPESVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPG-TK 341
Query: 227 NGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G ++++GEG G G+ +NIP +G D YV+A +++ P I +F+P++I++ G D++
Sbjct: 342 YGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAA 401
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
D G +T GY M ++ +A G+L ++ EGGY++ + A + ++
Sbjct: 402 DGDVIGACHVTPAGYGYMTHTLKGIAR----GKLAVILEGGYNLDSISKSALAVAKVLVG 457
Query: 346 LPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
P + I P+ EA ++V++ + + Q+ L+
Sbjct: 458 EPP---ENTITLRPQAEA--IEVVDEVIKIQSKYFKSLR 491
Score = 37 (18.1 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 43 FLEVLEKHPENSDRIKNI 60
+ E ++ HPE+ RI I
Sbjct: 137 YSEYIDPHPEDPRRIYRI 154
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 392 (143.0 bits), Expect = 3.8e-35, P = 3.8e-35
Identities = 101/338 (29%), Positives = 170/338 (50%)
Query: 48 EKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKA 104
+ PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E +
Sbjct: 113 DSFPEGPERLHAIKEQLMQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNE 171
Query: 105 GGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
G V D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++
Sbjct: 172 GELRVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSL 231
Query: 161 ADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
DGYC N+ LA + A +V+++D DVH+G GT F + VL S+H G
Sbjct: 232 MDGYCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQG 291
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIV 277
+ P H + G G+G GY +N+P G D Y+ A L++P +F+P +++
Sbjct: 292 RFWP-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVL 350
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G D+ DP G T G+ ++ ++ LA GG+L++ EGGY++ A +
Sbjct: 351 VAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGKLILSLEGGYNLRSLAEGVS 406
Query: 338 ATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
A+L +L P LL P A P +A +E+++ +
Sbjct: 407 ASLHTLLGDPCPLLEFPGAPCPSAQASLSCALEALEPF 444
Score = 359 (131.4 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 95/321 (29%), Positives = 166/321 (51%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L+ ++ PA +LL+ H+ +Y++ + +K + +
Sbjct: 509 HPEMPQRILRIMRRLEELGLAGRCLALPARPATDAELLACHSAEYVSRIRATEKMRTREL 568
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + PG++ A LA G ++ VL G A+VRPPGHHA+ A G
Sbjct: 569 HREGANYDSIYICPGTFACAQLAAGAACRLVEAVLAGEVLNGIAVVRPPGHHAERDSACG 628
Query: 164 YCFLNNAGLAVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A++ +++++D DVH+GNGT F VL ISLH +HG++
Sbjct: 629 FCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHLFEEDPSVLYISLHRYDHGTF 688
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G+ G G+ +N+ NG GD Y+ A LV+P +F P ++++
Sbjct: 689 FPMGDE-GASSQIGQAAGTGFTVNVAW-NGPRVGDPEYLAAWHRLVLPIAYEFNPELVLV 746
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ + Y + ++ LA+ GR++++ EGGY++ + + A
Sbjct: 747 SAGFDAARGDPLGGCQVSPECYAHLTHLLMGLAN----GRIILILEGGYNLISISESMAA 802
Query: 339 TLEGVL-NLP--LALLSDPIA 356
+L + P L LL P++
Sbjct: 803 CTRSLLGDSPPLLTLLRPPLS 823
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 91/300 (30%), Positives = 151/300 (50%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIP------AQIPQLLSFHTPDYINELVEA 101
E HPE S R+ IV+ L+ ++P + A + + + H Y+ L +A
Sbjct: 78 ESHPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKA 137
Query: 102 -DKAG--GKMVCDG---TVLNPGSWGAALLAVGTTLSAMKHVLDGHGK-----IAYALVR 150
D+A G + +G T ++ +L+A G ++ + V+ I +AL+R
Sbjct: 138 MDEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIR 197
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A + G ++ +ID DVH+GNGT + F +
Sbjct: 198 PPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIF 257
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + G S+P G + ++G+G+G G LN+PLP G+GD E++VP Q
Sbjct: 258 FLSTHQD----G-SYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQ 312
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D+ DP T Y + + ++ LA GGR + EGGY++
Sbjct: 313 RFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNL 372
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 83/222 (37%), Positives = 128/222 (57%)
Query: 109 VCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ DG+ + +W AA + + ++ + +LDG AYAL RPPGHHA+ A G+C+L
Sbjct: 111 LADGSCPVGESTWRAAYWSAQSAVAGAQALLDGE-PAAYALCRPPGHHARSEAAGGFCYL 169
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NNA +A Q+ L +V V+D D+H+G G E FY VL +S+H + ++ P
Sbjct: 170 NNAAIAAQV-LRDKYARVAVLDTDMHHGQGIQEIFYERADVLYVSVHGDPTNFYPGVA-- 226
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G +E G G G GYNLN+P+ +G + ++ A E + A++ F+ ++VL +G D
Sbjct: 227 GFAEERGAGAGEGYNLNLPMAHGASEGDFL-ARLEQALEAVKAFDAEVLVLSLGFDIYEL 285
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T DG+ +G+ +RSL G LIVQEGGYH+
Sbjct: 286 DPQSKVAVTRDGFAILGQRIRSL-----GLPCLIVQEGGYHL 322
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 383 (139.9 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 99/319 (31%), Positives = 163/319 (51%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L+ ++ PA +LL+ H+ +Y+ L +K + +
Sbjct: 499 HPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRDL 558
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + P ++ A LA G ++ VL G A+VRPPGHHA+P A G
Sbjct: 559 HREGANFDSIYICPSTFACAKLATGAACRLVEAVLSGEVLNGIAVVRPPGHHAEPNAACG 618
Query: 164 YCFLNNAGLAVQLA-LNSGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A + +G +++++D DVH+GNGT F VL +SLH + G++
Sbjct: 619 FCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTF 678
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G G G+ +N+P NG GD Y+ A LV+P +F P ++++
Sbjct: 679 FPMGDE-GASSQVGRDAGIGFTVNVPW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLI 736
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + ++ LA GGR++++ EGGY++ + + A
Sbjct: 737 SAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLA----GGRIILILEGGYNLASISESMAA 792
Query: 339 TLEGVLNLP---LALLSDP 354
+L P L LL P
Sbjct: 793 CTHSLLGDPPPQLTLLRPP 811
Score = 376 (137.4 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 94/315 (29%), Positives = 161/315 (51%)
Query: 48 EKHPENSDRIKNI-VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKA 104
+ PE+ +R+ I ++ G + +S+ + A+ +L+ H+ +YI+ E +
Sbjct: 102 DSFPESPERLHAIREQLILEGLLGRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNE 160
Query: 105 GGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
G V D L+P S+ A LA G+ L + ++ + A++RPPGHHAQ +
Sbjct: 161 GELRVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIRNGMAVIRPPGHHAQHNL 220
Query: 161 ADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
DGYC N+ +A + A +V+++D DVH+G GT F + VL S+H HG
Sbjct: 221 MDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHG 280
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
+ P H + +G G+G GY +N+P N TG D Y+ A +++P +F+P ++
Sbjct: 281 RFWP-HLKASNWSTIGFGQGQGYTINVPW-NQTGMRDADYIAAFLHILLPVASEFQPQLV 338
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D+ DP G T G+ + ++ LA GG+L++ EGGY++ A +
Sbjct: 339 LVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLA----GGKLILSLEGGYNLRALAKGV 394
Query: 337 HATLEGVLNLPLALL 351
A+L +L P +L
Sbjct: 395 SASLHTLLGDPCPML 409
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 381 (139.2 bits), Expect = 5.7e-34, P = 5.7e-34
Identities = 101/363 (27%), Positives = 180/363 (49%)
Query: 30 TGKGL-FDTGFDPGFLEVLEKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLL 87
+G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 84 SGTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELM 142
Query: 88 SFHTPDYINELVEADKAGGKM-------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
H+ +YI +L+E + + D L+P S+ A LA G+ L + VL+
Sbjct: 143 LVHSLEYI-DLMETTQYMNEEELHVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLEA 201
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ A++RPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G G
Sbjct: 202 EIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQ 261
Query: 200 EGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYV 257
F + VL S+H G + P H + G G+G GY +N+P G D Y+
Sbjct: 262 FAFDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTTGLGQGQGYTINVPWNQVGMQDADYI 320
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
A +++P +F+P ++++ G D+ DP G T G+ ++ ++ LA+ G
Sbjct: 321 AAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAE----G 376
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
+L++ EGGY++ A + ATL +L P +L P A P +A +E+++ +
Sbjct: 377 KLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLESPGAPCPSAQASLSCTLEALEPFWE 436
Query: 378 DVI 380
++
Sbjct: 437 SLV 439
Score = 349 (127.9 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 93/314 (29%), Positives = 158/314 (50%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L ++ PA +LL H+ +++ L +K + +
Sbjct: 501 HPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAELLC-HSAEHLERLRATEKMKTREL 559
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + ++ A LA G ++ VL G A+VRPPGHHA+P A G
Sbjct: 560 RREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVLNGVAVVRPPGHHAEPDAACG 619
Query: 164 YCFLNNAGLAVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A++ +++++D D+H+GNGT F VL ISLH +HG++
Sbjct: 620 FCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHIFEEDPSVLYISLHRYDHGTF 679
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G +G+ G G+ +N+ NG GD Y+ A LV+P +F P ++++
Sbjct: 680 FPMGNE-GACTRIGKATGTGFTVNVAW-NGPRMGDADYLAAWHRLVLPVAYEFNPELVLV 737
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ +GY + + LA+ G ++++ EGGY++T + + A
Sbjct: 738 SAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLAN----GHIILILEGGYNLTSISESMAA 793
Query: 339 TLEGVLNLPLALLS 352
+L PL LL+
Sbjct: 794 CTRSLLGDPLPLLT 807
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 380 (138.8 bits), Expect = 8.3e-34, P = 8.3e-34
Identities = 97/338 (28%), Positives = 169/338 (50%)
Query: 48 EKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKA 104
+ PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E +
Sbjct: 103 DSFPEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNE 161
Query: 105 GGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
G V D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++
Sbjct: 162 GELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSL 221
Query: 161 ADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
DGYC N+ +A + A +V+++D DVH+G GT F + VL S+H G
Sbjct: 222 MDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQG 281
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIV 277
+ P H + G G+G GY +N+P G D Y+ A +++P +F+P +++
Sbjct: 282 RFWP-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVL 340
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G D+ DP G T G+ ++ ++ LA GG+L++ EGGY++ A +
Sbjct: 341 VAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGKLILSLEGGYNLRALAEGVS 396
Query: 338 ATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
A+L +L P +L P A +A +E+++ +
Sbjct: 397 ASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPF 434
Score = 372 (136.0 bits), Expect = 6.0e-33, P = 6.0e-33
Identities = 97/316 (30%), Positives = 162/316 (51%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L+ ++ + PA +LL+ H+ +Y+ L +K + +
Sbjct: 500 HPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTREL 559
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + P ++ A LA G ++ VL G A+VRPPGHHA+ A G
Sbjct: 560 HRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACG 619
Query: 164 YCFLNNAGLAVQLALN-SGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A SG +++++D DVH+GNGT F VL +SLH +HG++
Sbjct: 620 FCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTF 679
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G G G+ +N+ NG GD Y+ A LV+P +F P ++++
Sbjct: 680 FPMGDE-GASSQIGRAAGTGFTVNVAW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLV 737
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ +GY + ++ LA GR++++ EGGY++T + + A
Sbjct: 738 SAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLAS----GRIILILEGGYNLTSISESMAA 793
Query: 339 TLEGVLNLPLALLSDP 354
+L P LL+ P
Sbjct: 794 CTRSLLGDPPPLLTLP 809
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 380 (138.8 bits), Expect = 8.5e-34, P = 8.5e-34
Identities = 97/338 (28%), Positives = 169/338 (50%)
Query: 48 EKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKA 104
+ PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E +
Sbjct: 117 DSFPEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNE 175
Query: 105 GGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
G V D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++
Sbjct: 176 GELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSL 235
Query: 161 ADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
DGYC N+ +A + A +V+++D DVH+G GT F + VL S+H G
Sbjct: 236 MDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQG 295
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIV 277
+ P H + G G+G GY +N+P G D Y+ A +++P +F+P +++
Sbjct: 296 RFWP-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVL 354
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G D+ DP G T G+ ++ ++ LA GG+L++ EGGY++ A +
Sbjct: 355 VAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGKLILSLEGGYNLRALAEGVS 410
Query: 338 ATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
A+L +L P +L P A +A +E+++ +
Sbjct: 411 ASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPF 448
Score = 372 (136.0 bits), Expect = 6.1e-33, P = 6.1e-33
Identities = 97/316 (30%), Positives = 162/316 (51%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L+ ++ + PA +LL+ H+ +Y+ L +K + +
Sbjct: 514 HPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTREL 573
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + P ++ A LA G ++ VL G A+VRPPGHHA+ A G
Sbjct: 574 HRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACG 633
Query: 164 YCFLNNAGLAVQLALN-SGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A SG +++++D DVH+GNGT F VL +SLH +HG++
Sbjct: 634 FCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTF 693
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G G G+ +N+ NG GD Y+ A LV+P +F P ++++
Sbjct: 694 FPMGDE-GASSQIGRAAGTGFTVNVAW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLV 751
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ +GY + ++ LA GR++++ EGGY++T + + A
Sbjct: 752 SAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLAS----GRIILILEGGYNLTSISESMAA 807
Query: 339 TLEGVLNLPLALLSDP 354
+L P LL+ P
Sbjct: 808 CTRSLLGDPPPLLTLP 823
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 341 (125.1 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 87/261 (33%), Positives = 140/261 (53%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA +AVG + V G K +A+VRPPGHHA+ + A G
Sbjct: 160 GGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMG 219
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+CF N+ + + + K++++D+DVH+GNGT + FY +L ISLH + G++
Sbjct: 220 FCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFF 279
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIV 277
P +G +E+G G G GYN+NI G GD Y+ A +V+P ++F+P+M++
Sbjct: 280 PG---SGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVAREFDPDMVL 336
Query: 278 LVVGQDS--SAFDPNGRQCLTM--DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ G D+ P G +T +G+ + + + +LA+ GR+ + EGG+ +T
Sbjct: 337 VSAGFDALEGHTPPLGGYKVTAKCNGFGHLTKQLMTLAN----GRVALALEGGHDLTAIC 392
Query: 334 YCLHATLEGVL-NLPLALLSD 353
A + +L N P +L D
Sbjct: 393 DASEACINALLGNEPGSLEED 413
Score = 40 (19.1 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE++ RI++I S L+ + G A + ++ H+ ++ + L G+ +
Sbjct: 82 HPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLYGTSPLDGQKL 140
Query: 110 CDGTVLNPGS 119
T+L S
Sbjct: 141 DPRTLLGDDS 150
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 376 (137.4 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 95/306 (31%), Positives = 158/306 (51%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L+ ++ PA +LL+ H+ +Y+ L +K + +
Sbjct: 502 HPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHSAEYVERLRATEKMKTRDL 561
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + P ++ A LA G ++ VL G A+VRPPGHHA+P A G
Sbjct: 562 HREGANFESIYICPSTFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPGHHAEPDAACG 621
Query: 164 YCFLNNAGLAVQLA-LNSGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A + +G +++++D DVH+GNGT F VL +SLH + G++
Sbjct: 622 FCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTF 681
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G G G+ +N+P NG GD Y+ LV+P +F P ++++
Sbjct: 682 FPMGDE-GASSQVGRAAGTGFTVNVPW-NGPRMGDADYLATWHRLVLPIAYEFNPELVLI 739
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY----SAY 334
G D++ DP G +T +GY + ++ LA GGR++++ EGGY++T A
Sbjct: 740 SAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLA----GGRIILILEGGYNLTSISESMAA 795
Query: 335 CLHATL 340
C H+ L
Sbjct: 796 CTHSLL 801
Score = 373 (136.4 bits), Expect = 4.3e-33, P = 4.3e-33
Identities = 104/349 (29%), Positives = 172/349 (49%)
Query: 26 LNHDT----GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIVS-ILKRGPISPYISWHSGI 79
LN +T G GL FD + + PEN +R+ I ++ G + +S+ +
Sbjct: 75 LNSETRVPVGTGLVFDEQLNDFHCLWDDSFPENPERLHAIKEQLILEGLLGRCVSFQARF 134
Query: 80 PAQIPQLLSFHTPDYIN--ELVEADKAGGKMVCDGTV----LNPGSWGAALLAVGTTLSA 133
A+ +L+ H+ +YI+ E + G V GT L+P S+ A LA G+ L
Sbjct: 135 -AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAGTYDSVYLHPNSYSCACLATGSVLRL 193
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDV 192
+ V+ + A++RPPGHHAQ ++ DGYC N+ +A + A +++++D DV
Sbjct: 194 VDAVMGAEIRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDV 253
Query: 193 HYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-G 250
H+G GT F + VL S+H HG + P H + G G+G GY +N+P G
Sbjct: 254 HHGQGTQFIFDQDPSVLYFSIHRYEHGRFWP-HLKASNWSTTGFGQGQGYTINVPWNQVG 312
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQ---CLTMDGYREMGRIV 307
D Y+ A +++P +F+P ++++ G D+ DP RQ T G+ + +
Sbjct: 313 MRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKVRQGEMSATPAGFAHLTHFL 372
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
LA GG+L++ EGGY++ A + +L +L P +L P+A
Sbjct: 373 MGLA----GGKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVA 417
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 371 (135.7 bits), Expect = 2.8e-33, P = 2.8e-33
Identities = 92/276 (33%), Positives = 149/276 (53%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D N ++ ++LL+VG + V K A A++RPPGHHA+ G+C NN
Sbjct: 224 DSIYFNNLTFASSLLSVGGAIETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNV 283
Query: 171 GLAVQLA---LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ 226
+A ++ L C K++++D DVH+GNG + FY VL ISLH+ +GS+ P +
Sbjct: 284 SVAARVCQQRLGLSCRKIMILDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGE-K 342
Query: 227 NGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
+G D G G G G N+NIP P+ G GD Y++A ++V+P Q+F+P+++++ G D++
Sbjct: 343 DGDADFCGAGAGEGKNVNIPWPSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAA 402
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
A D G +T Y M ++ +LA G++ + EGGY+ ++ SA + TL G
Sbjct: 403 AGDTLGGCFVTPACYAHMTHMLMTLAQ----GKVAVCLEGGYNFRSISKSALAVTKTLMG 458
Query: 343 VLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQND 378
N P D +++ EA + I + Q+D
Sbjct: 459 --NPP-----DRLSFTCPSEA-AISTIRRVSSIQSD 486
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 374 (136.7 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 84/216 (38%), Positives = 129/216 (59%)
Query: 119 SWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA- 177
S+ ALLA G+ ++ + +L G + A A+VRPPGHHA+ A G+CF N A L + A
Sbjct: 538 SYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQ 597
Query: 178 -LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGE 235
+ +V+++D DVH+GNGT F + VL ISLH G++ P+ ++ D++G
Sbjct: 598 SITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNS-EDANYDKVGL 656
Query: 236 GEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
G+G GYN+NIP G GD Y+ A LV+P ++F P ++++ G D++ DP G
Sbjct: 657 GKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQ 716
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
+T +GY + + SLA GR+LI+ EGGY++T
Sbjct: 717 VTPEGYAHLTHQLMSLA----AGRVLIILEGGYNLT 748
Score = 374 (136.7 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 99/346 (28%), Positives = 171/346 (49%)
Query: 50 HPENSDRIKNIVSILK-RGPISPYISWHSGIPAQIPQLLSFHTPDYIN------ELVEAD 102
HPE R+ ++ +L+ G + + + + +LL HT +Y+ + E +
Sbjct: 82 HPECPARVSTVMEMLETEGLLGRCVQVEARAVTE-DELLLVHTKEYVELMKSTQNMTEEE 140
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
D L+PG + +A L+VG+ L + V+ + +++ RPPGHHAQ +
Sbjct: 141 LKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSINRPPGHHAQADKMN 200
Query: 163 GYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
G+C NN +A + A +V+++D DVH+G G F VL S+H GS+
Sbjct: 201 GFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSF 260
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG-DRG-YVHAMTELVVPAIQKFEPNMIVL 278
P H + +G G G GYN+N+P N G + G Y+ A +L++P +F+P ++++
Sbjct: 261 WP-HLKESDSSSVGSGAGQGYNINLPW-NKVGMESGDYITAFQQLLLPVAYEFQPQLVLV 318
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D+ DP G ++ + + + +++ +A GRL++ EGGY+ L +
Sbjct: 319 AAGFDAVIGDPKGGMQVSPECFSILTHMLKGVAQ----GRLVLALEGGYN-------LQS 367
Query: 339 TLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
T EGV +LL DP + P A ++SI + +D+ PF K
Sbjct: 368 TAEGVCASMRSLLGDPCPHLPSSGAPCESALKSISKTISDLYPFWK 413
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 367 (134.2 bits), Expect = 4.9e-33, P = 4.9e-33
Identities = 90/276 (32%), Positives = 142/276 (51%)
Query: 90 HTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+P+Y++ + E G + + D +P ++ A LA G L + VL G +
Sbjct: 64 HSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGF 202
ALVRPPGHH Q A+G+C NN +A A G +++V+D DVH+G G F
Sbjct: 124 NGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLF 183
Query: 203 YRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAM 260
VL S H HG + P + D +G G+G G+ +N+P G G+ YV A
Sbjct: 184 EDDPSVLYFSWHRYEHGRFWP-FLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAF 242
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
L++P +F+P ++++ G DS+ DP G+ T + + + ++++ LA GGR+
Sbjct: 243 LHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLA----GGRVC 298
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
V EGGYH+ A + T++ +L P LS P+A
Sbjct: 299 AVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMA 334
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 90/257 (35%), Positives = 131/257 (50%)
Query: 76 HSGIPAQIP--QLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSA 133
H +P P L + P++I+ K G + G+ + +W A + L+A
Sbjct: 84 HDALPLVWPVRDLANQQVPEFID-----GKLGFFAMDAGSPITATTWDAVRTSADIALTA 138
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVH 193
+ + +G A+AL RPPGHHA GYC+LNNA +A Q A+ G +V V+D+D H
Sbjct: 139 LALIDEGQDS-AFALCRPPGHHAAREYMGGYCYLNNAAIAAQHAITRGARRVAVLDVDFH 197
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ-NGTVDELGEGEGFGYNLNIPLPNGTG 252
+GNGT FY VL +SLH G S+P +G E G G G G NLN+PLP T
Sbjct: 198 HGNGTQNIFYDRGDVLFVSLH---GDPAVSYPYFSGHASERGSGAGEGCNLNLPLPKNTS 254
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
+ Y A+ EL ++ F P ++V+ +G D+ DP L + + MG+I+ ++
Sbjct: 255 WQHYRQAL-ELACKQLRAFAPELLVVSLGVDTFKDDPISHFLLESEDFLGMGQIIATV-- 311
Query: 313 RYSGGRLLIVQEGGYHV 329
G L V EGGY V
Sbjct: 312 ---GTPTLFVMEGGYMV 325
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 346 (126.9 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 86/259 (33%), Positives = 132/259 (50%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG + V G K +A++RPPGHHA+ + A G
Sbjct: 322 GGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 381
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 382 FCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDN--GN 439
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 440 FFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 499
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 500 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 555
Query: 337 HATLEGVLNLPLALLSDPI 355
A + +L++ L L + +
Sbjct: 556 EACVSALLSVELQPLDEAV 574
Score = 41 (19.5 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 244 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS 285
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 84/218 (38%), Positives = 118/218 (54%)
Query: 112 GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAG 171
G + G+W AA A L+A H+ +G A+AL RPPGHHA + GYC+LNNA
Sbjct: 117 GAPITAGTWQAAYSAAQVALTAQAHIQNG-AHSAFALCRPPGHHAAGDLMGGYCYLNNAA 175
Query: 172 LAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVD 231
+A Q L+ G KV ++D+D H+GNGT FY + VL S+H + + P G D
Sbjct: 176 IAAQAFLDQGHRKVAILDVDYHHGNGTQSIFYERSDVLFTSIHGHPEAEFPFFL--GYAD 233
Query: 232 ELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNG 291
E GEG G G+N N PL G+G + A+ E IQ+++ ++IV+ +G D+ DP
Sbjct: 234 ECGEGAGEGFNFNYPLAAGSGWDAWSAAL-EQACNEIQRYDADIIVVSLGVDTFKDDPIS 292
Query: 292 RQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+ L Y MG+ + +L G L V EGGY V
Sbjct: 293 QFKLDSPDYLAMGKRIAAL-----GKPTLFVMEGGYAV 325
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 355 (130.0 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 96/292 (32%), Positives = 145/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG + V G K +A++RPPGHHA+ + A G
Sbjct: 773 GGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 832
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 833 FCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDN--GN 890
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P Q+F P+++++
Sbjct: 891 FFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLV 950
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 951 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 1006
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 1007 EACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAG 1058
Score = 40 (19.1 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 695 HPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQTVHS 736
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 354 (129.7 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 96/292 (32%), Positives = 144/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG L V G K +A++RPPGHHA+ + A G
Sbjct: 782 GGIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 841
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 842 FCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDN--GN 899
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 900 FFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 959
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 960 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 1015
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 1016 EACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQKFAAG 1067
Score = 41 (19.5 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 704 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS 745
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 361 (132.1 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 87/275 (31%), Positives = 140/275 (50%)
Query: 90 HTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+P+Y+ L G + + D L+P ++ A LAVG L + VL G +
Sbjct: 64 HSPEYVALLQGTQALGTRELQALSKEYDAVYLHPSTFHCARLAVGAALQLVDAVLTGAVR 123
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGF 202
ALVRPPGHH+Q A+G+C NN +A + A G +++++D DVH+G G F
Sbjct: 124 NGLALVRPPGHHSQRATANGFCVFNNVAIAAKHAQQKHGLRRILIVDWDVHHGQGIQYIF 183
Query: 203 YRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAM 260
VL S H HG + P ++ D +G G G G+ +N+P G G+ YV A
Sbjct: 184 EDDPSVLYFSWHRYEHGHFWPCLRESDA-DAVGRGRGLGFTVNLPWNQVGMGNADYVAAF 242
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+++P +F+P ++++ G DS+ DP G+ T + + + +++ LA GGR+
Sbjct: 243 LHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECFAHLTHLLQVLA----GGRVC 298
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
V EGGYH+ + + + +L P LS P+
Sbjct: 299 AVLEGGYHLESLSQSVCMMVRALLGDPALPLSGPM 333
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 319 (117.4 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 84/239 (35%), Positives = 126/239 (52%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S AA A G+ V K +A+VRPPGHHA + A G
Sbjct: 618 GGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMG 677
Query: 164 YCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ +A QL K++++D DVH+GNGT + FY+ VL ISLH H G
Sbjct: 678 FCFFNSVAIACRQLQQQGKASKILIMDWDVHHGNGTQQTFYQDPSVLYISLH-RHDD-GN 735
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G VDE+G G G G+N+N+ G GD Y+ A +V+P ++F P+++++
Sbjct: 736 FFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRMVVMPIAREFSPDLVLV 795
Query: 279 VVGQDSSAFDPN--GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
G D++ P G ++ + M + + SLA GG +++ EGG+ +T A C
Sbjct: 796 SAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLA----GGAVVLALEGGHDLT--AIC 848
Score = 54 (24.1 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
+HPE++ RI++I S L+ + G A + +L S H+ ++
Sbjct: 539 RHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV 585
Score = 40 (19.1 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 15 GIINVFWDDGMLNHDTGKGLFDT 37
G+++V DDG+ + ++ G DT
Sbjct: 414 GVVSV-GDDGLEHRESSHGQHDT 435
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 359 (131.4 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 89/277 (32%), Positives = 139/277 (50%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +P ++ A LAVG L + V+ G ALVRPPGHH+Q A+G+C NN
Sbjct: 93 DSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNV 152
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + A L G +++++D DVH+G GT F VL S H H + PS ++
Sbjct: 153 AIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESD 212
Query: 229 TVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D +G G+G G+N+N+P G G+ Y+ A +++P +F+P ++++ G DS
Sbjct: 213 -YDAVGLGKGKGFNINLPWNKVGMGNSDYLAAFFHVLLPVAFEFDPELVLVSSGYDSGIG 271
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP G+ T + + + + LA G+L ++ EGGYH L + E V
Sbjct: 272 DPEGQMNATPEVFAHLTHFLMQLAH----GKLCVILEGGYH-------LKSLSESVCMTV 320
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
LL DP+ + A + IESI+ + P+ K
Sbjct: 321 KTLLRDPLPQVTGEMAPCLSAIESIQNVRAAHKPYWK 357
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 351 (128.6 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 95/292 (32%), Positives = 144/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG + V G K +A++RPPGHHA+ + A G
Sbjct: 750 GGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 809
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 810 FCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDN--GN 867
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 868 FFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 927
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 928 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 983
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 984 EACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQRFAAG 1035
Score = 41 (19.5 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 672 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS 713
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 348 (127.6 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 95/292 (32%), Positives = 144/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG + V G K +A++RPPGHHA+ + A G
Sbjct: 568 GGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 627
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 628 FCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDN--GN 685
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 686 FFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 745
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 746 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 801
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 802 EACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIEIQSKHWSCVQRFATG 853
Score = 41 (19.5 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 490 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS 531
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 348 (127.6 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 95/292 (32%), Positives = 144/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG + V G K +A++RPPGHHA+ + A G
Sbjct: 568 GGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 627
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 628 FCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDN--GN 685
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 686 FFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 745
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 746 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 801
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 802 EACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIEIQSKHWSCVQRFATG 853
Score = 41 (19.5 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 490 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS 531
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 351 (128.6 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
Identities = 95/292 (32%), Positives = 144/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG + V G K +A++RPPGHHA+ + A G
Sbjct: 777 GGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 836
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 837 FCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDN--GN 894
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 895 FFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 954
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 955 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 1010
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 1011 EACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQRFAAG 1062
Score = 41 (19.5 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 699 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS 740
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 80/212 (37%), Positives = 120/212 (56%)
Query: 118 GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA 177
G+W AA + + ++ ++ G + AY L RPPGHHA +A G+CFLNN+ +A +
Sbjct: 122 GTWEAAYWSAQSAITGADLIIQGE-RSAYVLSRPPGHHAFGDLAGGFCFLNNSAIAAERL 180
Query: 178 LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGE 237
+G + ++DIDVH+GNGT FY + VLT+S+H + + P G E G G
Sbjct: 181 RAAGL-RPAILDIDVHHGNGTQGIFYERDDVLTVSIHADPARFYPFFW--GHAQERGAGR 237
Query: 238 GFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTM 297
G GYNLN+PL GTGD Y+ ++ + + + F ++V+ +G D+S DP +T
Sbjct: 238 GLGYNLNLPLARGTGDDDYLDTLS-VALRQVASFGSRVLVVALGLDASIDDPFQGLAITQ 296
Query: 298 DGYREMGRIVRSLADRYSGGRL--LIVQEGGY 327
DG+ +G +LA G R+ L VQEGGY
Sbjct: 297 DGFARIGA---ALA----GTRVPVLFVQEGGY 321
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 352 (129.0 bits), Expect = 3.9e-32, Sum P(2) = 3.9e-32
Identities = 95/282 (33%), Positives = 151/282 (53%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S GAA +AVG + V K +A+VRPPGHHA+ + A G
Sbjct: 733 GGLGVDSDTVWNELHSAGAARMAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMG 792
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+CF N+ + + + GK++++D+DVH+GNGT + FY +L +SLH + G++
Sbjct: 793 FCFFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFF 852
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIV 277
P +G +E+G G G G+N+NI G GD Y+ A +++PA +F+P +++
Sbjct: 853 PG---SGAPNEVGSGPGEGFNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVL 909
Query: 278 LVVGQDS-SAFDPN-GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+ G D+ DP G +T + + + + LAD GR+++ EGG+ +T A C
Sbjct: 910 VSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLLKLAD----GRVVLALEGGHDLT--AIC 963
Query: 336 LHATLEGVLNLPLALLSDPIAYYPED--EAFP-VKVIESIKQ 374
A+ E +N ALL + + PED P + I S+K+
Sbjct: 964 -DAS-EACIN---ALLGNELEPLPEDIVHQIPNMNAIASLKK 1000
Score = 39 (18.8 bits), Expect = 3.9e-32, Sum P(2) = 3.9e-32
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 50 HPENSDRIKNIVSILK 65
HPE++ RI++I S L+
Sbjct: 655 HPEHAGRIQSIWSRLQ 670
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 350 (128.3 bits), Expect = 4.7e-32, Sum P(2) = 4.7e-32
Identities = 95/292 (32%), Positives = 144/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG + V G K +A++RPPGHHA+ + A G
Sbjct: 785 GGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 844
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 845 FCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDN--GN 902
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 903 FFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 962
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 963 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 1018
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 1019 EACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQRFAAG 1070
Score = 41 (19.5 bits), Expect = 4.7e-32, Sum P(2) = 4.7e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 707 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS 748
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 350 (128.3 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 89/258 (34%), Positives = 139/258 (53%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA +AVG + V G K +A+VRPPGHHA+ + A G
Sbjct: 732 GGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMG 791
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+CF N+ + + + K++++D+DVH+GNGT + FY +L ISLH + G++
Sbjct: 792 FCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFF 851
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIV 277
P +G +E+G G G GYN+NI G GD Y+ A +V P ++F+P+M++
Sbjct: 852 PG---SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVL 908
Query: 278 LVVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---- 331
+ G D+ P G +T + + + + +LAD GR+++ EGG+ +T
Sbjct: 909 VSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLAD----GRVVLALEGGHDLTAICDA 964
Query: 332 SAYCLHATLEGVLNLPLA 349
S C++A L L PLA
Sbjct: 965 SEACVNALLGNELE-PLA 981
Score = 39 (18.8 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 50 HPENSDRIKNIVSILK 65
HPE++ RI++I S L+
Sbjct: 654 HPEHAGRIQSIWSRLQ 669
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 349 (127.9 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 95/292 (32%), Positives = 144/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG + V G K +A++RPPGHHA+ + A G
Sbjct: 771 GGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 830
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 831 FCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDN--GN 888
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 889 FFPGSGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 948
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 949 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 1004
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 1005 EACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIEIQSKHWSCVQRFATG 1056
Score = 41 (19.5 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + ++ + H+
Sbjct: 693 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHS 734
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 352 (129.0 bits), Expect = 7.4e-32, Sum P(2) = 7.4e-32
Identities = 96/292 (32%), Positives = 144/292 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V TV N S A +AVG L V G K +A++RPPGHHA+ + A G
Sbjct: 782 GGIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTAMG 841
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH G
Sbjct: 842 FCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDN--GN 899
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G +E+G G G GYN+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 900 FFPGSGAPEEVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV 959
Query: 279 VVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
G D+ P G +T R G + R L +GGR+++ EGG+ +T
Sbjct: 960 SAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQLMT-LAGGRVVLALEGGHDLTAICDAS 1015
Query: 337 HATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDVIPFLKG 385
A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 1016 EACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQKFAAG 1067
Score = 37 (18.1 bits), Expect = 7.4e-32, Sum P(2) = 7.4e-32
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE++ RI++ S L+ + G A + ++ + H+ +Y L + V
Sbjct: 704 HPEHAGRIQSTWSRLQETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLYGTSPLNRQKV 762
Query: 110 CDGTVLNP 117
+L P
Sbjct: 763 DSKKLLGP 770
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 79/211 (37%), Positives = 115/211 (54%)
Query: 122 AALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD--GYCFLNNAGLAVQ-LAL 178
A L+A G+ + + +L G K +ALVRPPGHHA T+ G+C +NN + V L
Sbjct: 75 AHLIAAGSCIELAERILAGEVKNGFALVRPPGHHATRTVYGNRGFCNINNVAITVDYLRW 134
Query: 179 NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEG 238
G K+ +ID DVH+G+GT + FY VL ISLH + + +P G +DE G
Sbjct: 135 VKGVKKIAIIDTDVHHGDGTQDIFYHDPDVLFISLHQDGRTL---YPGTGFIDEAGTPNA 191
Query: 239 FGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMD 298
+G +N+PLP G+GD ++ + E V+P +++F+P I+ GQD+ DP R +T
Sbjct: 192 YGTTINLPLPPGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTAR 251
Query: 299 GYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
GY GRI + L V EGGY +
Sbjct: 252 GY---GRITELIKPD------LAVLEGGYSI 273
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 348 (127.6 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 92/287 (32%), Positives = 147/287 (51%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA +AVG + V G K +A+VRPPGHHA+ + A G
Sbjct: 734 GGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMG 793
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+CF N+ + + + K++++D+DVH+GNGT + FY +L ISLH + G++
Sbjct: 794 FCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFF 853
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIV 277
P +G +E+G G G GYN+NI G GD Y+ A +V P ++F+P+M++
Sbjct: 854 PG---SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKEFDPDMVL 910
Query: 278 LVVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+ G D+ P G +T + + + + +LAD G +++ EGG+ +T
Sbjct: 911 VSAGFDALEGHAPPLGGYKVTAKCFGHLTKQLMTLAD----GHVVLALEGGHDLTAICDA 966
Query: 336 LHATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQYQNDV 379
A + +L L L++ I + P A K+IE +Y V
Sbjct: 967 SEACVNALLGNELEPLAEDILHQTPNMNAVISLQKIIEIQSKYWKSV 1013
Score = 40 (19.1 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE++ RI++I S L+ + G A + ++ H+ ++ + L + G+ +
Sbjct: 656 HPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLYGTNPLDGQKL 714
Query: 110 CDGTVLNPGS 119
T+L S
Sbjct: 715 DPRTLLGDTS 724
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 335 (123.0 bits), Expect = 9.3e-32, Sum P(2) = 9.3e-32
Identities = 93/262 (35%), Positives = 135/262 (51%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G
Sbjct: 336 GGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMG 395
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K++++D DVH+GNGT + FY VL +SLH G
Sbjct: 396 FCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDD--GN 453
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+ +VL
Sbjct: 454 FFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPD-VVL 512
Query: 279 VVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
V SS FD + GY R G + + L +GGR+++ EGG+ +T
Sbjct: 513 V----SSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMG-LAGGRIVLALEGGHDLTAICD 567
Query: 332 -SAYCLHATLEGVLN-LPLALL 351
S C+ A L L+ LP +L
Sbjct: 568 ASEACVSALLGNELDPLPEKVL 589
Score = 44 (20.5 bits), Expect = 9.3e-32, Sum P(2) = 9.3e-32
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 259 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 300
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 355 (130.0 bits), Expect = 9.9e-32, P = 9.9e-32
Identities = 97/334 (29%), Positives = 169/334 (50%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEA-DKAGGKM 108
E +R+ + L++G + + A +L H+P+Y++ L +A D +
Sbjct: 26 ERPERLTAALRRLQQGGLEQRCLQLAPREASEAELGLVHSPEYVSLLRGTQALDTQELRA 85
Query: 109 VC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
+ D +P ++ A LAVG L + VL G ALVRPPGHH+Q A+G+C
Sbjct: 86 LSGQYDAVYFHPSTFHCARLAVGAALQLVDAVLMGAVHNGLALVRPPGHHSQRAAANGFC 145
Query: 166 FLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPS 223
NN +A + A G +++++D DVH+G G F VL S H HG + P
Sbjct: 146 VFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWP- 204
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+ + D +G+G+G G+ +N+P G G+ Y+ A +++P +F+P ++++ G
Sbjct: 205 YLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEFDPELVLVSAGF 264
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
DS+ DP G+ T + + + ++++ LA GGR+ V EGGYH+ + + +
Sbjct: 265 DSAIGDPEGQMQATPECFGHLTQLLQVLA----GGRVCAVLEGGYHLESLSQSVCMVVRA 320
Query: 343 VLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
+L P+ LS P+ P A ++ I+S++ Q
Sbjct: 321 LLGDPVPPLSGPME--PHRSA--LESIQSVRAAQ 350
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 338 (124.0 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 92/266 (34%), Positives = 135/266 (50%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S AA LAVG+ + + V G + +A+VRPPGHHA+ + G
Sbjct: 691 GGIGVDSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVRPPGHHAEESTPMG 750
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K++++D DVH+GNGT + FY VL +SLH G
Sbjct: 751 FCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDD--GN 808
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A T +V+P +F P+ +VL
Sbjct: 809 FFPGSGAPDEVGIGPGVGFNVNMAFTGGLEPPMGDADYLAAFTSVVMPIANEFSPD-VVL 867
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY---SGGRLLIVQEGGYHVTYSAYC 335
V SS FD + GY+ + L + +GGRL++ EGG+ +T
Sbjct: 868 V----SSGFDAVEGHPPPLGGYKLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDA 923
Query: 336 LHATLEGVLNLPLALLSDPIAYYPED 361
A + +L L DPI PED
Sbjct: 924 SEACVSALLGNEL----DPI---PED 942
Score = 47 (21.6 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
HPE++ RI++I S L+ + G A + +L + H+ ++
Sbjct: 620 HPEHAGRIQSIWSRLQETGLRGQCECIRGRKATLEELQTVHSEAHV 665
Score = 38 (18.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 78 GIPAQIPQLLSFHTPDYI 95
GIP P + H P Y+
Sbjct: 352 GIPITTPFMPGAHLPSYL 369
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 341 (125.1 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 96/275 (34%), Positives = 139/275 (50%)
Query: 93 DYINELVEADKAGGKMVCDG-TVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
D I + GG V D T+ N S GAA LAVG + + V G K +A+VR
Sbjct: 709 DVITTVFIGTPVGGVNVVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVR 768
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA+ + G+C+ N+ +A +L K++++D DVH+GNGT + FY VL
Sbjct: 769 PPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVL 828
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVV 265
ISLH G P +G DE+G G G G+N+N+ G GD Y+ A +V+
Sbjct: 829 YISLHRYDD--GNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVM 886
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLI 321
P +F P+ +VLV SS FD + GY + G + + L +GGR+++
Sbjct: 887 PIANEFAPD-VVLV----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG-LAGGRVVL 940
Query: 322 VQEGGYHVTY----SAYCLHATLEGVLN-LPLALL 351
EGG+ +T S C+ A L L+ LP +L
Sbjct: 941 ALEGGHDLTAICDASEACVSALLGNELDPLPEKVL 975
Score = 44 (20.5 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 644 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 685
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 354 (129.7 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 81/234 (34%), Positives = 127/234 (54%)
Query: 122 AALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV---QLAL 178
A+L++ G + K ++ G K +A++RPPGHHA+ A G+C NN +A Q
Sbjct: 202 ASLISAGGAIETCKSIVSGQIKNGFAVIRPPGHHAEQDSAMGFCIFNNVPIAAKVCQAEY 261
Query: 179 NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQN-----GTVDE 232
C KV+++D DVH+GNG FY VL ISLH+ +G + P P+N G++
Sbjct: 262 PEICQKVLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISS 321
Query: 233 LGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNG 291
G G G G N+NI + G GD Y+ A ++++P +F P+++++ G D++A D G
Sbjct: 322 CGSGPGLGRNINIGWDDQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAGDQLG 381
Query: 292 RQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
+T Y M ++ SLA GR+ + EGGY+ ++ SA + TL G
Sbjct: 382 GCFVTPPCYAHMTHMLMSLAH----GRVAVCLEGGYNLSAISKSALAVARTLMG 431
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 340 (124.7 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 95/266 (35%), Positives = 137/266 (51%)
Query: 102 DKAGGKMVCDG-TVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
D GG V D T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ +
Sbjct: 726 DCLGGVNVVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEES 785
Query: 160 MADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
G+C+ N+ +A +L K++++D DVH+GNGT + FY VL ISLH
Sbjct: 786 TPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDD 845
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPN 274
G P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+
Sbjct: 846 --GNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPD 903
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
+VLV SS FD + GY + G + + L +GGR+++ EGG+ +T
Sbjct: 904 -VVLV----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG-LAGGRVVLALEGGHDLT 957
Query: 331 Y----SAYCLHATLEGVLN-LPLALL 351
S C+ A L L+ LP +L
Sbjct: 958 AICDASEACVSALLGNELDPLPEKVL 983
Score = 44 (20.5 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 649 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 690
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 351 (128.6 bits), Expect = 2.7e-31, P = 2.7e-31
Identities = 95/289 (32%), Positives = 147/289 (50%)
Query: 77 SGIPAQIPQLLSFHTPDYINELVEA----DK----AGGKMVCDGTVLNPGSWGAALLAVG 128
S A +L H+P+YI LV+ DK A K + +P ++ A LA G
Sbjct: 51 SACEASEEELGLVHSPEYI-ALVQKTQTLDKEELHALSKQY-NAVYFHPDTFHCARLAAG 108
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
L + VL G ALVRPPGHH+Q A+G+C NN LA + A G ++++
Sbjct: 109 AALQLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILI 168
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D DVH+G G F VL S H HGS+ P P++ D +G+G+G G+ +N+P
Sbjct: 169 VDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDA-DAVGQGQGQGFTVNLP 227
Query: 247 LPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
G G+ Y+ A +++P +F+P ++++ G DS+ DP G+ T + + + +
Sbjct: 228 WNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQ 287
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
+++ LA GGR+ V EGGYH L + + V + LL DP
Sbjct: 288 LLQVLA----GGRICAVLEGGYH-------LESLAQSVCMMVQTLLGDP 325
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 339 (124.4 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 98/284 (34%), Positives = 140/284 (49%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G
Sbjct: 752 GGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMG 811
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K +V+D DVH+GNGT + FY +VL ISLH G
Sbjct: 812 FCYFNSVAIAAKLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDD--GN 869
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+ +VL
Sbjct: 870 FFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPD-VVL 928
Query: 279 VVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
V SS FD + GY + G + + L +GGR+++ EGG+ +T
Sbjct: 929 V----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG-LAGGRVVLALEGGHDLTAICD 983
Query: 335 CLHATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQY 375
A + +L L L + + P A KVIE QY
Sbjct: 984 ASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVIEIHSQY 1027
Score = 44 (20.5 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 675 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 716
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 352 (129.0 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 99/318 (31%), Positives = 154/318 (48%)
Query: 80 PAQIPQLLSFHTPDYINELVEAD-KAGGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHV 137
P + L + P+ + ++ A GG V TV N S A +AVG + V
Sbjct: 460 PTVVKHLFTTGKPNTAHPIMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKV 519
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGN 196
G K +A++RPPGHHA+ + A G+CF N+ + +L GKV+++D D+H+GN
Sbjct: 520 AAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGN 579
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----G 252
GT + FY VL ISLH G P +G +E+G G G GYN+N+ G G
Sbjct: 580 GTQQAFYDDPSVLYISLHRYDN--GNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIG 637
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSL 310
D Y+ A +V+P +F P+++++ G D+ P G +T R G + R L
Sbjct: 638 DVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTA---RCFGHLTRQL 694
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYY-PEDEAFPV--K 367
+GGR+++ EGG+ +T A + +L++ L L + + P A K
Sbjct: 695 MT-LAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLEK 753
Query: 368 VIESIKQYQNDVIPFLKG 385
VIE ++ + V F G
Sbjct: 754 VIEIQSKHWSCVQRFATG 771
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 337 (123.7 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 93/262 (35%), Positives = 135/262 (51%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G
Sbjct: 748 GGVGVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMG 807
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K++++D DVH+GNGT + FY VL ISLH G
Sbjct: 808 FCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDD--GN 865
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+ +VL
Sbjct: 866 FFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPD-VVL 924
Query: 279 VVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
V SS FD + GY + G + + L +GGR+++ EGG+ +T
Sbjct: 925 V----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG-LAGGRVVLALEGGHDLTAICD 979
Query: 332 -SAYCLHATLEGVLN-LPLALL 351
S C+ A L L+ LP +L
Sbjct: 980 ASEACVSALLGNELDPLPEKVL 1001
Score = 44 (20.5 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 671 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 712
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 322 (118.4 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 84/239 (35%), Positives = 128/239 (53%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S AA A G+ V K +A+VRPPGHHA + A G
Sbjct: 600 GGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMG 659
Query: 164 YCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ +A QL + K++++D DVH+GNGT + FY+ +VL ISLH H G
Sbjct: 660 FCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPRVLYISLH-RHDD-GN 717
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G VDE+G G G G+N+N+ G GD Y+ A +V+P ++F P+++++
Sbjct: 718 FFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLV 777
Query: 279 VVGQDSSAFDPN--GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
G D++ P G ++ + M + + SLA GG +++ EGG+ +T A C
Sbjct: 778 SAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLA----GGAVVLALEGGHDLT--AIC 830
Score = 57 (25.1 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
KHPE++ RI++I S L+ + G A + +L S H+ ++
Sbjct: 521 KHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV 567
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 328 (120.5 bits), Expect = 6.5e-31, Sum P(2) = 6.5e-31
Identities = 86/239 (35%), Positives = 125/239 (52%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S AA A G+ V K +A+VRPPGHHA P+ A G
Sbjct: 618 GGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMG 677
Query: 164 YCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ +A QL K++++D DVH+GNGT + FYR VL ISLH H G
Sbjct: 678 FCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLH-RHDD-GN 735
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+NI G GD Y+ A +V+P +F P+++++
Sbjct: 736 FFPGSGAADEVGAGPGEGFNVNIAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLV 795
Query: 279 VVGQDSSAFDPN--GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
G D++ P G ++ + M + + SLA GG +++ EGG+ +T A C
Sbjct: 796 SAGFDAADGHPPPLGGYKVSAKCFGYMTKQLMSLA----GGAIVLALEGGHDLT--AIC 848
Score = 50 (22.7 bits), Expect = 6.5e-31, Sum P(2) = 6.5e-31
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
HPE++ RI++I S L+ + G A + +L HT ++
Sbjct: 540 HPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHV 585
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 335 (123.0 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 89/263 (33%), Positives = 133/263 (50%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G
Sbjct: 744 GGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMG 803
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K++++D DVH+GNGT + FY VL +SLH G
Sbjct: 804 FCYFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDD--GN 861
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+ +VL
Sbjct: 862 FFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPD-VVL 920
Query: 279 VVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
V SS FD + GY + G + + L +GGRL++ EGG+ +T
Sbjct: 921 V----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG-LAGGRLVLALEGGHDLTAICD 975
Query: 335 CLHATLEGVLNLPLALLSDPIAY 357
A + +L L L + + +
Sbjct: 976 ASEACVSALLGNELEPLPEKVLH 998
Score = 44 (20.5 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 672 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 713
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 320 (117.7 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 84/239 (35%), Positives = 126/239 (52%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S AA A G+ V K +A+VRPPGHHA + A G
Sbjct: 655 GGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMG 714
Query: 164 YCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ +A QL K++++D DVH+GNGT + FY+ VL ISLH H G
Sbjct: 715 FCFFNSVAIACRQLQQQGKASKILIVDWDVHHGNGTQQTFYQDPNVLYISLH-RHDD-GN 772
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G VDE+G G G G+N+N+ G GD Y+ A +V+P ++F P+++++
Sbjct: 773 FFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLV 832
Query: 279 VVGQDSSAFDPN--GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
G D++ P G ++ + M + + SLA GG +++ EGG+ +T A C
Sbjct: 833 SAGFDAAEGHPPPLGGYHVSAKCFGYMTQQLMSLA----GGAVVLALEGGHDLT--AIC 885
Score = 58 (25.5 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 49 KHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
+HPE++ RI++I S +L+RG S S G A + +L S H+ ++
Sbjct: 576 RHPEHAGRIQSIWSRLLERGLRSQCESLR-GRKASLEELQSVHSERHV 622
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 335 (123.0 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 93/262 (35%), Positives = 135/262 (51%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G
Sbjct: 752 GGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMG 811
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K++++D DVH+GNGT + FY VL +SLH G
Sbjct: 812 FCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDD--GN 869
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+ +VL
Sbjct: 870 FFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPD-VVL 928
Query: 279 VVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
V SS FD + GY R G + + L +GGR+++ EGG+ +T
Sbjct: 929 V----SSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMG-LAGGRIVLALEGGHDLTAICD 983
Query: 332 -SAYCLHATLEGVLN-LPLALL 351
S C+ A L L+ LP +L
Sbjct: 984 ASEACVSALLGNELDPLPEKVL 1005
Score = 44 (20.5 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 675 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 716
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 334 (122.6 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 88/263 (33%), Positives = 133/263 (50%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G
Sbjct: 745 GGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMG 804
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K++++D DVH+GNGT + FY VL +SLH G
Sbjct: 805 FCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDD--GN 862
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+ +VL
Sbjct: 863 FFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPD-VVL 921
Query: 279 VVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
V SS FD + GY + G + + L +GGR+++ EGG+ +T
Sbjct: 922 V----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG-LAGGRIVLALEGGHDLTAICD 976
Query: 335 CLHATLEGVLNLPLALLSDPIAY 357
A + +L L L + + +
Sbjct: 977 ASEACVSALLGNELEPLPEKVLH 999
Score = 44 (20.5 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 673 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 714
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 322 (118.4 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 84/241 (34%), Positives = 126/241 (52%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S AA A G+ V K +A+VRPPGHHA + A G
Sbjct: 619 GGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMG 678
Query: 164 YCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ +A QL S K++++D DVH+GNGT + FY+ VL ISLH H G
Sbjct: 679 FCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLH-RHDD-GN 736
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G VDE+G G G G+N+N+ G GD Y+ A +V+P ++F P+++++
Sbjct: 737 FFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYRE----MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
G D++ P + GY G + + L + +GG +++ EGG+ +T A
Sbjct: 797 SAGFDAAEGHP-----APLGGYHVSAKCFGYMTQQLMN-LAGGAVVLALEGGHDLT--AI 848
Query: 335 C 335
C
Sbjct: 849 C 849
Score = 54 (24.1 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
+HPE++ RI++I S L+ + G A + +L S H+ ++
Sbjct: 540 RHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV 586
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 333 (122.3 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 93/262 (35%), Positives = 134/262 (51%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G
Sbjct: 751 GGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMG 810
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K +++D DVH+GNGT + FY VL ISLH G
Sbjct: 811 FCYFNSVAIAAKLLQQRLDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDD--GN 868
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+ +VL
Sbjct: 869 FFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPD-VVL 927
Query: 279 VVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
V SS FD + GY + G + + L +GGR+++ EGG+ +T
Sbjct: 928 V----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG-LAGGRIVLALEGGHDLTAICD 982
Query: 332 -SAYCLHATLEGVLN-LPLALL 351
S C+ A L L+ LP +L
Sbjct: 983 ASEACVSALLGNELDPLPEKVL 1004
Score = 44 (20.5 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 674 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 715
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 318 (117.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 83/241 (34%), Positives = 126/241 (52%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S AA A G+ V K +A+VRPPGHHA + A G
Sbjct: 606 GGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMG 665
Query: 164 YCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ +A QL + K++++D DVH+GNGT + FY+ VL ISLH H G
Sbjct: 666 FCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLH-RHDD-GN 723
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G VDE+G G G G+N+N+ G GD Y+ A +V+P ++F P+++++
Sbjct: 724 FFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLV 783
Query: 279 VVGQDSSAFDPNGRQCLTMDGYRE----MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
G D++ P + GY G + + L + +GG +++ EGG+ +T A
Sbjct: 784 SAGFDAAEGHP-----APLGGYHVSAKCFGYMTQQLMN-LAGGAVVLALEGGHDLT--AI 835
Query: 335 C 335
C
Sbjct: 836 C 836
Score = 57 (25.1 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
KHPE++ RI++I S L+ + G A + +L S H+ ++
Sbjct: 527 KHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV 573
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 322 (118.4 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 84/241 (34%), Positives = 126/241 (52%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S AA A G+ V K +A+VRPPGHHA + A G
Sbjct: 675 GGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMG 734
Query: 164 YCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N+ +A QL S K++++D DVH+GNGT + FY+ VL ISLH H G
Sbjct: 735 FCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLH-RHDD-GN 792
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G VDE+G G G G+N+N+ G GD Y+ A +V+P ++F P+++++
Sbjct: 793 FFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLV 852
Query: 279 VVGQDSSAFDPNGRQCLTMDGYRE----MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
G D++ P + GY G + + L + +GG +++ EGG+ +T A
Sbjct: 853 SAGFDAAEGHP-----APLGGYHVSAKCFGYMTQQLMN-LAGGAVVLALEGGHDLT--AI 904
Query: 335 C 335
C
Sbjct: 905 C 905
Score = 54 (24.1 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
+HPE++ RI++I S L+ + G A + +L S H+ ++
Sbjct: 596 RHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV 642
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 94/290 (32%), Positives = 144/290 (49%)
Query: 50 HPENSDRIKNIVSILKRGP-ISP--YISWHSGIPAQIPQLLSFHTPDYINELVEADKAG- 105
HP N R+ +L++G ISP IS +I + HT +YIN + A +
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYI---HTEEYINAVKRAGEGKL 76
Query: 106 GKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQ 157
K + + T + P A+ L VG TL+A+ VL G K+ +AL G HH
Sbjct: 77 EKSIAMTYGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSG--KVKHALNLGGGLHHGF 134
Query: 158 PTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
A G+C N++ +A++ +V+ ID D H+G+G FY V TISLH
Sbjct: 135 RGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYDDPNVCTISLHET- 193
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIV 277
G + P G V+E G+G G+ Y+ N+PL T D ++ + +V F+P++I+
Sbjct: 194 GRY--LFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDIIL 251
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
G D+ +DP C TM+ YRE+ ++ R +A+ Y GR + V GGY
Sbjct: 252 TQNGADAHYYDPLTHLCATMNIYREIPKLAREIANEYCEGRWIAVGGGGY 301
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 94/290 (32%), Positives = 144/290 (49%)
Query: 50 HPENSDRIKNIVSILKRGP-ISP--YISWHSGIPAQIPQLLSFHTPDYINELVEADKAG- 105
HP N R+ +L++G ISP IS +I + HT +YIN + A +
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYI---HTEEYINAVKRAGEGKL 76
Query: 106 GKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQ 157
K + + T + P A+ L VG TL+A+ VL G K+ +AL G HH
Sbjct: 77 EKSIAMTYGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSG--KVKHALNLGGGLHHGF 134
Query: 158 PTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
A G+C N++ +A++ +V+ ID D H+G+G FY V TISLH
Sbjct: 135 RGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYDDPNVCTISLHET- 193
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIV 277
G + P G V+E G+G G+ Y+ N+PL T D ++ + +V F+P++I+
Sbjct: 194 GRY--LFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDIIL 251
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
G D+ +DP C TM+ YRE+ ++ R +A+ Y GR + V GGY
Sbjct: 252 TQNGADAHYYDPLTHLCATMNIYREIPKLAREIANEYCEGRWIAVGGGGY 301
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 330 (121.2 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 88/247 (35%), Positives = 129/247 (52%)
Query: 119 SWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL 178
S GAA LAVG + + V G K +A+VRPPGHHA+ + G+C+ N+ +A +L
Sbjct: 754 SSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQ 813
Query: 179 NS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGE 237
K++++D DVH+GNGT + FY VL ISLH G P +G DE+G G
Sbjct: 814 QRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDD--GNFFPGSGAPDEVGTGA 871
Query: 238 GFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQ 293
G G+N+N+ G GD Y+ A +V+P +F P+ +VLV SS FD
Sbjct: 872 GVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPD-VVLV----SSGFDAVEGH 926
Query: 294 CLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTY----SAYCLHATLEGVLN 345
+ GY + G + + L +GGR+++ EGG+ +T S C+ A L L+
Sbjct: 927 PTPLGGYNLSAKCFGYLTKQLMG-LAGGRVVLALEGGHDLTAICDASEACVSALLGNELD 985
Query: 346 -LPLALL 351
LP +L
Sbjct: 986 PLPEKVL 992
Score = 44 (20.5 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 665 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 706
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 327 (120.2 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 95/284 (33%), Positives = 139/284 (48%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ + S GAA LAVG + V G K +A+VRPPGHHA+ + G
Sbjct: 720 GGVGVDSDTIWSEVHSSGAARLAVGCVVELAFKVATGELKNGFAVVRPPGHHAEESTPMG 779
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A +L K +V+D DVH+GNGT + FY VL +SLH G
Sbjct: 780 FCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDD--GN 837
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+ +VL
Sbjct: 838 FFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPD-VVL 896
Query: 279 VVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
V SS FD + GY + G + + L +GGR+++ EGG+ +T
Sbjct: 897 V----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG-LAGGRVVLALEGGHDLTAICD 951
Query: 335 CLHATLEGVLNLPLALLSDPIAYY-PEDEAFPV--KVIESIKQY 375
A + +L L L + + P D + KVI+ QY
Sbjct: 952 ASEACVSALLGNELDPLPEKVLQQRPYDNSVRSMEKVIDIHSQY 995
Score = 44 (20.5 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
HPE++ RI++I S L+ + G A + +L + H+
Sbjct: 643 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS 684
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 334 (122.6 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 80/269 (29%), Positives = 139/269 (51%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +P ++ A LA G L + V+ G + ALVRPPGHH+Q A+G+C N+
Sbjct: 91 DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSV 150
Query: 171 GLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + A G +++++D D+H+G GT F VL S H HG + P + +
Sbjct: 151 AIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWP-YLRES 209
Query: 229 TVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D +G G G G+ +N+P G G+ Y+ A ++++P +F ++++ G DS+
Sbjct: 210 DADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIG 269
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
D G+ T + + + ++++ LA GGR+ V EGGYH+ + + ++ +L P
Sbjct: 270 DSEGQMQATPECFAHLTQLLQVLA----GGRVCAVLEGGYHLESLSQSVCMMVQALLGDP 325
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
LS P+ P A ++ I+S++ Q
Sbjct: 326 APPLSGPMV--PHGSA--LQSIQSVRAAQ 350
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 334 (122.6 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 80/269 (29%), Positives = 139/269 (51%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +P ++ A LA G L + V+ G + ALVRPPGHH+Q A+G+C N+
Sbjct: 93 DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSV 152
Query: 171 GLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + A G +++++D D+H+G GT F VL S H HG + P + +
Sbjct: 153 AIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWP-YLRES 211
Query: 229 TVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D +G G G G+ +N+P G G+ Y+ A ++++P +F ++++ G DS+
Sbjct: 212 DADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIG 271
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
D G+ T + + + ++++ LA GGR+ V EGGYH+ + + ++ +L P
Sbjct: 272 DSEGQMQATPECFAHLTQLLQVLA----GGRVCAVLEGGYHLESLSQSVCMMVQALLGDP 327
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
LS P+ P A ++ I+S++ Q
Sbjct: 328 APPLSGPMV--PHGSA--LQSIQSVRAAQ 352
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 91/297 (30%), Positives = 142/297 (47%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE R+++++ L+ P+ + + A LL H Y+ ++ +A G
Sbjct: 20 HPERVARLEHVLHALE--PLD--LRRVTAPLAAEDDLLRIHPAGYVADIRDARPDEGFAQ 75
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T L+PGS AA A G + A+ VL G + A+ +RPPGHHA+ A G+C
Sbjct: 76 IDGDTFLSPGSVDAAFRAAGAVVRAVDMVLGGEAQNAFCAIRPPGHHAERETAMGFCLFG 135
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA LA + AL+ G +V V+D DVH+GNGT + + + L I+ P P +
Sbjct: 136 NAALAAKHALDHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQQM-----PLWPGS 190
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G DE G G +NIPL GTG A P ++ F+P +I++ G D+
Sbjct: 191 GRPDEDG---AHGQIVNIPLAPGTGGAEMRAAYMAQAFPRLRAFKPELIIISAGFDAHQD 247
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
DP + + + + +LA GR++ EGGY + A A ++ ++
Sbjct: 248 DPLANLNWSTADFAWLTAELCALAQELCQGRIVSTLEGGYDLNALAAATRAHVQELI 304
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 331 (121.6 bits), Expect = 5.2e-29, P = 5.2e-29
Identities = 73/233 (31%), Positives = 123/233 (52%)
Query: 123 ALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSG 181
A LA G TL + V+ + ALVRPPGHH+Q + A+G+C NN +A A N
Sbjct: 158 AKLAAGATLQLVDSVMKREVRNGMALVRPPGHHSQRSAANGFCVFNNVAIAALYAKKNYN 217
Query: 182 CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFG 240
+++++D DVH+G G F VL S H H S+ P+ P++ +G+G+G G
Sbjct: 218 LNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESD-YSSVGKGKGSG 276
Query: 241 YNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+N+P G + Y+ A +++P +F+P ++++ G DS+ DP G C +
Sbjct: 277 FNINLPWNKVGMTNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEI 336
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLS 352
+ + ++ LA G++ +V EGGY++T + T+ +L P +S
Sbjct: 337 FAHLTHLLMPLA----AGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPTPRIS 385
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 93/291 (31%), Positives = 138/291 (47%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIP---AQIPQLLSFHTPDYINELVEADK- 103
E HP N R V ++K I+ + IP A + +L H P Y+ ++ K
Sbjct: 20 EDHPLNPQRYALAVELMK---IAEVLKEEEIIPPRSATLKELYLVHDPAYVEAVMNLSKN 76
Query: 104 ---AGGKMVCDGTVLNPGSWG----AALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA 156
G G+ NP G AAL+A G+ L A + + +G + + HHA
Sbjct: 77 PENVNGSRFGLGSEDNPVFSGMHEAAALVAGGSALGA-ELIYEGEADHVFNIAGGL-HHA 134
Query: 157 QPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+C N+ +A+ G KV +D+D H+G+G FY VLTIS+H
Sbjct: 135 LRDAASGFCIYNDLAVAIAKFREKGL-KVAYVDLDAHHGDGVQWLFYSDPGVLTISIHET 193
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
G + P G++ ELGEG +G +NIPL T D ++ A+ E+V I+KF+P+++
Sbjct: 194 -GRY--LFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIRKFKPDIL 250
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
V G DS FDP T ++E +++ LA GGR L GGY
Sbjct: 251 VTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGGY 301
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 93/291 (31%), Positives = 138/291 (47%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIP---AQIPQLLSFHTPDYINELVEADK- 103
E HP N R V ++K I+ + IP A + +L H P Y+ ++ K
Sbjct: 20 EDHPLNPQRYALAVELMK---IAEVLKEEEIIPPRSATLKELYLVHDPAYVEAVMNLSKN 76
Query: 104 ---AGGKMVCDGTVLNPGSWG----AALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA 156
G G+ NP G AAL+A G+ L A + + +G + + HHA
Sbjct: 77 PENVNGSRFGLGSEDNPVFSGMHEAAALVAGGSALGA-ELIYEGEADHVFNIAGGL-HHA 134
Query: 157 QPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+C N+ +A+ G KV +D+D H+G+G FY VLTIS+H
Sbjct: 135 LRDAASGFCIYNDLAVAIAKFREKGL-KVAYVDLDAHHGDGVQWLFYSDPGVLTISIHET 193
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
G + P G++ ELGEG +G +NIPL T D ++ A+ E+V I+KF+P+++
Sbjct: 194 -GRY--LFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIRKFKPDIL 250
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
V G DS FDP T ++E +++ LA GGR L GGY
Sbjct: 251 VTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGGY 301
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 324 (119.1 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 83/232 (35%), Positives = 118/232 (50%)
Query: 105 GGKMVCDGTVLNPGSWG-AALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T N S AA LA GT + V +G K +A +RPPGHHA+ A G
Sbjct: 557 GGIGVDSDTYFNDASTQTAARLAAGTLIELSSQVAEGRLKNGFACIRPPGHHAEHEQAMG 616
Query: 164 YCFLNNAGLAV---QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSW 220
+CF NN +AV Q + C K+ +ID DVH+GNGT F VL +SLH H
Sbjct: 617 FCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLYMSLH-RHDK- 674
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMIVLV 279
G P G+V E+G+ + G +N+P D Y+ A ++ P + F P+ I++
Sbjct: 675 GNFFPGTGSVTEVGKNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFIIVS 734
Query: 280 VGQDSSAFDPNGRQCLTMDGYR---EM-GRIVRSLADRYSGGRLLIVQEGGY 327
G D+ PN + GY EM G + +SL + Y+ G++++ EGGY
Sbjct: 735 AGFDACHGHPNA-----LGGYEVTPEMFGYMTKSLLN-YASGKVVLALEGGY 780
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 317 (116.6 bits), Expect = 6.8e-28, P = 6.8e-28
Identities = 74/233 (31%), Positives = 127/233 (54%)
Query: 147 ALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRS 205
ALVRPPGHH+Q A+G+C NN +A + A G +++++D DVH+G G F
Sbjct: 9 ALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDD 68
Query: 206 NKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTEL 263
VL S H HG + P + + D +G+G+G G+ +N+P G G+ Y+ A +
Sbjct: 69 PSVLYFSWHRYEHGRFWP-YLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHV 127
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
++P +F+P ++++ G DS+ DP G+ T + + + ++++ LA GGR+ V
Sbjct: 128 LLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLA----GGRVCAVL 183
Query: 324 EGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
EGGYH+ + + + +L P+ LS P+ P A ++ I+S++ Q
Sbjct: 184 EGGYHLESLSQSVCMVVRALLGDPVPPLSGPME--PHRSA--LESIQSVRAAQ 232
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 311 (114.5 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 95/318 (29%), Positives = 155/318 (48%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKM---VC---DGTVLNPGSWGAALLAVGTTLSAM 134
A+ ++L+ HT Y++++ + + C + +N +W A LA G ++ M
Sbjct: 59 AEESEILAVHTKRYVDDVKSTETMTVEQQESFCTKYEDIYVNSATWHRAKLAAGASIDLM 118
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHY 194
V+ + A +RPPGHHA P G+C NN +A + A+ +G KV+++D DVH
Sbjct: 119 TSVMAAK-RPGIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKAAIQNG-QKVLIVDYDVHA 176
Query: 195 GNGTAEGFYRSNK--VLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-G 250
GNGT E + + V IS+H +G + P+ PQ G + +N+PL G
Sbjct: 177 GNGTQECVEQMGEGNVQLISIHRYENGHFWPNMPQTGIY------HNYKNTINLPLNTIG 230
Query: 251 TGDRGYVHAM-TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
D Y HA+ T +++P I F+P+++++ G D+S DP G +T G+ M +R
Sbjct: 231 LTDADY-HALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATM---IRM 286
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDE---AFPV 366
L D +G + + EGGY + L A E VL ALL + I ++ A
Sbjct: 287 LID--TGIPVAALLEGGYFLD----ALAADSEWVLR---ALLGEEIPRIRVEKIHSAIAD 337
Query: 367 KVIESIKQYQNDVIPFLK 384
+ +K+Y+ PF K
Sbjct: 338 TIGRVVKRYEGSC-PFFK 354
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 312 (114.9 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 78/245 (31%), Positives = 126/245 (51%)
Query: 90 HTPDYINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+P+YI LV+ + K D +P ++ A LA G L + VL G
Sbjct: 64 HSPEYI-ALVQKTQTLDKEELHTLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTGAV 122
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
ALVRPPGHH+Q A+G+C NN +A + A G +++++D DVH+G G
Sbjct: 123 HNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYI 182
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
F VL S H HG++ P P++ D +G G G G+ +N+P G G+ Y+ A
Sbjct: 183 FEDDPSVLYFSWHRYEHGNFWPFLPESDA-DTVGRGRGQGFTVNLPWNQVGMGNADYLAA 241
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G DS+ DP G+ T + + + ++++ LA GGR+
Sbjct: 242 FLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLA----GGRI 297
Query: 320 LIVQE 324
V E
Sbjct: 298 CAVLE 302
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 306 (112.8 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 80/255 (31%), Positives = 131/255 (51%)
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDGTVLN-------P---GSWGAALLAVGTTLSAM 134
+LL FH+ DYI+ L K + + T+ P G + + + G +L A
Sbjct: 89 ELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDAT 148
Query: 135 KHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDV 192
+ ++ G IA + G HHA+ G+C++N+ L++ + L +V+ IDID+
Sbjct: 149 RKLISGMSDIA---INWSGGLHHAKKFEPSGFCYVNDIVLSI-INLLRVHPRVMYIDIDL 204
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
H+G+G E FY +++V+T+S H +G + P G+VDE+G G G Y +N+PL +G
Sbjct: 205 HHGDGVQEAFYNTDRVMTVSFHKYNGEFFPG---TGSVDEVGIGSGKNYAINVPLRDGID 261
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y+ ++ P I KF+P IV G DS +D G C ++ R G V+ +
Sbjct: 262 DESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLG--CFNLN-IRAHGECVKFI-- 316
Query: 313 RYSGGRLLIVQEGGY 327
+ G +L+V GGY
Sbjct: 317 KSFGIPMLVVGGGGY 331
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 306 (112.8 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 80/255 (31%), Positives = 131/255 (51%)
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDGTVLN-------P---GSWGAALLAVGTTLSAM 134
+LL FH+ DYI+ L K + + T+ P G + + + G +L A
Sbjct: 89 ELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDAT 148
Query: 135 KHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDV 192
+ ++ G IA + G HHA+ G+C++N+ L++ + L +V+ IDID+
Sbjct: 149 RKLISGMSDIA---INWSGGLHHAKKFEPSGFCYVNDIVLSI-INLLRVHPRVMYIDIDL 204
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
H+G+G E FY +++V+T+S H +G + P G+VDE+G G G Y +N+PL +G
Sbjct: 205 HHGDGVQEAFYNTDRVMTVSFHKYNGEFFPG---TGSVDEVGIGSGKNYAINVPLRDGID 261
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y+ ++ P I KF+P IV G DS +D G C ++ R G V+ +
Sbjct: 262 DESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLG--CFNLN-IRAHGECVKFI-- 316
Query: 313 RYSGGRLLIVQEGGY 327
+ G +L+V GGY
Sbjct: 317 KSFGIPMLVVGGGGY 331
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 91/268 (33%), Positives = 137/268 (51%)
Query: 86 LLSFHTPDYIN---ELVEADKAGGKMVCD-GTVLNP---GSWGAALLAVGTTLSAMKHVL 138
LL+FH PDY++ E E+D A G + NP G + A L G T+ A + V
Sbjct: 60 LLTFHAPDYLDRLREFSESDDARADFRYGLGDLDNPVFRGLYDWARLGAGGTIEAARLVA 119
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGT 198
+ IA+ L HHA A G+ +LN+A +A+ L L G +V +DID H+G+G
Sbjct: 120 EEGYDIAFNLAGG-WHHAHRAKASGFSYLNDAVVAINLLLEKGL-RVAYLDIDAHHGDGV 177
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
E FY +++VLTIS+H + G + P G E G G G GY++NIPL D ++
Sbjct: 178 QEAFYDTDRVLTISIHES-GMY--FFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMK 234
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A E+ P + + P+++V +G D+ DP R +T Y + R +++L G
Sbjct: 235 AFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKAL-----GIP 289
Query: 319 LLIVQEGGYHVTYSAYCLHATLE-GVLN 345
+ V GGY++ A TL GV+N
Sbjct: 290 WVAVGGGGYNLVNVARAW--TLAWGVMN 315
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 91/268 (33%), Positives = 137/268 (51%)
Query: 86 LLSFHTPDYIN---ELVEADKAGGKMVCD-GTVLNP---GSWGAALLAVGTTLSAMKHVL 138
LL+FH PDY++ E E+D A G + NP G + A L G T+ A + V
Sbjct: 60 LLTFHAPDYLDRLREFSESDDARADFRYGLGDLDNPVFRGLYDWARLGAGGTIEAARLVA 119
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGT 198
+ IA+ L HHA A G+ +LN+A +A+ L L G +V +DID H+G+G
Sbjct: 120 EEGYDIAFNLAGG-WHHAHRAKASGFSYLNDAVVAINLLLEKGL-RVAYLDIDAHHGDGV 177
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
E FY +++VLTIS+H + G + P G E G G G GY++NIPL D ++
Sbjct: 178 QEAFYDTDRVLTISIHES-GMY--FFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMK 234
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A E+ P + + P+++V +G D+ DP R +T Y + R +++L G
Sbjct: 235 AFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKAL-----GIP 289
Query: 319 LLIVQEGGYHVTYSAYCLHATLE-GVLN 345
+ V GGY++ A TL GV+N
Sbjct: 290 WVAVGGGGYNLVNVARAW--TLAWGVMN 315
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 96/324 (29%), Positives = 154/324 (47%)
Query: 48 EKHPENSDRIKNIVSILKRG-PISPYISWHSGIPAQIPQLLSFHTPDYINELVE------ 100
+KHP RI I + L G + +S S A ++ FH DY++ L
Sbjct: 43 DKHPMKPHRI-TITNHLVMGYGLHNKMSVFSPRMATFGEMSEFHREDYLDFLKRVTPDNA 101
Query: 101 ---ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG--HH 155
ADK + D + G++ + + G +L A + ++ G IA + G HH
Sbjct: 102 EQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIA---INWSGGLHH 158
Query: 156 AQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A+ A G+C++N+ LA+ L + +V+ IDID+H+G+G + FY S++VLT+S H
Sbjct: 159 AKRGEASGFCYVNDIVLAI-LNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHK 217
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+G + P+ G DE G G + LN+PL +G GD Y ++ P I F+P+
Sbjct: 218 YNGDFFPA---TGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSA 274
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV--TYSA 333
IVL G DS +D G L++ + E R RS +L+V GGY + A
Sbjct: 275 IVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSF-----NIPMLVVGGGGYTLRNVARA 329
Query: 334 YCLHATLEGVLNLPLALLSDPIAY 357
+C ++ +P L + + Y
Sbjct: 330 WCYETSICVNEQIPSELPRETLYY 353
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 301 (111.0 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 85/245 (34%), Positives = 124/245 (50%)
Query: 122 AALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS- 180
AA +A G + G + +A+VRPPGHHA+ +A G+CF N+ +A +L
Sbjct: 938 AARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEANLAMGFCFFNSIAIAAKLLRQRM 997
Query: 181 -GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGF 239
+++++D DVH+GNGT + FY+S +L +S+H H G P G E G G G
Sbjct: 998 PEVRRILIVDWDVHHGNGTQQAFYQSPDILYLSIH-RHDD-GNFFPGTGGPTECGSGAGL 1055
Query: 240 GYNLNIP----LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCL 295
G+N+NI L GD Y+ A +V+P + F P+ IVLV SS FD
Sbjct: 1056 GFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPD-IVLV----SSGFDAATGHPA 1110
Query: 296 TMDGYRE----MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALL 351
+ GY G + R L + + G++++ EGGY + +A C A E V ALL
Sbjct: 1111 PLGGYHVSPACFGFMTRELL-QLANGKVVLALEGGYDL--AAICDSAQ-ECVR----ALL 1162
Query: 352 SDPIA 356
DP A
Sbjct: 1163 GDPAA 1167
Score = 37 (18.1 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 5/12 (41%), Positives = 11/12 (91%)
Query: 49 KHPENSDRIKNI 60
+HPE+S R++++
Sbjct: 845 QHPEHSGRLQSV 856
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 292 (107.8 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 76/246 (30%), Positives = 129/246 (52%)
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVL-DGHGKIAYALVRPPGHHA------QPTMADGYC 165
T ++ S AAL A G+ +A+ V G+ + A+ +RPPGHHA + GYC
Sbjct: 1171 TFVSHRSIKAALRASGSVCAAVDSVSRSGYTR-AFCAIRPPGHHAGRYGRTSDAPSQGYC 1229
Query: 166 FLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM--NHGSWGP 222
+NN + + A L +G ++ V+D DVH+GNGT E + L IS+H+ + P
Sbjct: 1230 LINNVAIGAKYASLTAGYSRIAVVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYP 1289
Query: 223 SHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
Q+ G +DE+ G+ G LNI L TG ++ ++P ++ ++P +I L G
Sbjct: 1290 GTGQDVGDIDEVS-GQFDGNILNIGLKRNTGSAVFLQQWMNKIIPRLEAYKPQLIFLSAG 1348
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV--TYSAY-CLHA 338
D DP L + Y + ++++++A +Y GR++ V EGGY + T S C+++
Sbjct: 1349 FDGHKDDPTNGLKLNEEDYFVITKMIKTVAFKYCKGRIISVLEGGYGIEKTNSLQRCVNS 1408
Query: 339 TLEGVL 344
L+ ++
Sbjct: 1409 HLKALI 1414
Score = 49 (22.3 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIP-AQIPQLLSFHTPDYINEL 98
H E DRI+ VS + +P + P + +++ H +YI +L
Sbjct: 1080 HLEKPDRIQVAVSCINEFASNPLVDIFDNPPEVDMRYVMAVHDANYIKKL 1129
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 84/266 (31%), Positives = 136/266 (51%)
Query: 80 PAQIPQLLSFHTPDYIN--ELVEADKAGG----KM--VCDGTVLNPGSWG-AALLAVGTT 130
PA +L FH+ DY++ E V + K + + + PG + ++ + G+
Sbjct: 62 PADAEDMLKFHSEDYVDFLERVTPENINEWKDVKRFHIGEDCPVFPGLYDYCSIYSGGSI 121
Query: 131 LSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
A+K L+ H A+ G HHA+ A G+C++N+ LA+ L L +V+ ID
Sbjct: 122 EGALK--LN-HRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAI-LELLKFHARVLYID 177
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
IDVH+G+G E FY +++V+T+S H G + P G +DE+G G Y++N+PL +
Sbjct: 178 IDVHHGDGVQEAFYLTDRVMTVSFHKFGGDFFPG---TGDIDEIGAKTGKLYSVNVPLAD 234
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D+ Y++ ++ + + P++IVL G DS FD G LT+ G+ E R V+S
Sbjct: 235 GIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKS 294
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYC 335
L++ GGY V A C
Sbjct: 295 F-----NIPTLVLGGGGYTVRNVARC 315
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/275 (30%), Positives = 141/275 (51%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGG----KMVCDGTVLN-PGSWGA---ALLAVGTTLS 132
A + ++ SFHT Y+ L + + G + V G + P + G A G T++
Sbjct: 62 ASMEEMASFHTDAYLQHLQKVSEEGDDDHPESVEYGLGYDCPATEGIFDYAAAVGGATIT 121
Query: 133 AMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDI 190
A + +LDG K+A + PG HHA+ A G+C+LN+A L + L L +++ ID+
Sbjct: 122 AAQCLLDGKCKVA---INWPGGWHHAKKDEASGFCYLNDAVLGI-LRLRQKFDRILYIDL 177
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPN 249
D+H+G+G + F ++KV+T+SLH + P P G V ++G G+G Y++N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVTDIGLGKGRYYSVNVPIQD 233
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D Y ++ F P +VL +G D+ A DP +T +G +G+ ++
Sbjct: 234 GIQDEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAGDPMCSFNMTPEG---VGKCLKY 290
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ LI+ GGY++ +A C L GV+
Sbjct: 291 VLQWQLA--TLILGGGGYNLANTARCW-TYLTGVI 322
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 287 (106.1 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 94/329 (28%), Positives = 152/329 (46%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
KHP R+ ++ + + + A +LL FH+ DY+N L +
Sbjct: 44 KHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENANK 103
Query: 109 VCDGTV--LNPGS--------WGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG--HHA 156
+ GT+ N G + L G +L A + +++ IA + G HHA
Sbjct: 104 LPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIA---INWSGGLHHA 160
Query: 157 QPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
+ G+C++N+ L++ L L +++ IDID+H+G+G E FY +++V T+S H
Sbjct: 161 KKNSPSGFCYVNDIVLSI-LNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKY 219
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
+G + P G + E+G +G + LN+PL +G D Y++ +V P I F+P +I
Sbjct: 220 NGEFFPG---TGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLI 276
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV-TYSAYC 335
V G DS D G L + + E + V+S G +L+V GGY S
Sbjct: 277 VQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSF-----GLPMLVVGGGGYTPRNVSRLW 331
Query: 336 LHATLEGVLNLPLALLSDPIAYYPEDEAF 364
+ T G+LN LL + I PED F
Sbjct: 332 TYET--GILND--VLLPEDI---PEDIPF 353
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 91/321 (28%), Positives = 155/321 (48%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWGA---ALLAVGTTLS 132
A + ++ +FHT Y+ L + + G D P + G A G T++
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSVEYGLGYDCPATEGIFDYAAAVGGATIT 121
Query: 133 AMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDI 190
A + ++DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D+
Sbjct: 122 AAQCLIDGMCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFDRILYVDL 177
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPN 249
D+H+G+G + F ++KV+T+SLH + P P G V ++G G+G Y++N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D Y H ++ F P +VL +G D+ A DP +T G +G+ ++
Sbjct: 234 GIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKY 290
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKV- 368
+ +L + GGY++ +A C L GV+ L L S+ + + PV V
Sbjct: 291 ILQWQLATLILGGETGGYNLANTARCW-TYLTGVI-LGKTLSSEIPDHEVKSCLSPVSVL 348
Query: 369 -IESIKQY--QNDVIPFLKGS 386
I +K Y + P L GS
Sbjct: 349 IIPYLKAYPFSSHSPPHLAGS 369
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 80/276 (28%), Positives = 141/276 (51%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWG----AALLAVGTTL 131
A + ++ +FHT Y+ L + + G + D P + G AA + G T+
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYAAAIG-GGTI 120
Query: 132 SAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
+A + ++DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D
Sbjct: 121 TAAQCLIDGKCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFDRILYVD 176
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLP 248
+D+H+G+G + F ++KV+T+SLH + P P G + ++G G+G Y++N+P+
Sbjct: 177 LDLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQ 232
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
+G D Y H ++ Q F P +VL +G D+ A DP +T G +G+ ++
Sbjct: 233 DGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLK 289
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ LI+ GGY++ +A C L GV+
Sbjct: 290 YVLQWQLA--TLILGGGGYNLANTARCW-TYLTGVI 322
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 80/276 (28%), Positives = 141/276 (51%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWG----AALLAVGTTL 131
A + ++ +FHT Y+ L + + G + D P + G AA + G T+
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIEYGLGYDCPATEGIFDYAAAIG-GGTI 120
Query: 132 SAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
+A + ++DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D
Sbjct: 121 TAAQCLIDGKCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFDRILYVD 176
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLP 248
+D+H+G+G + F ++KV+T+SLH + P P G + ++G G+G Y++N+P+
Sbjct: 177 LDLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQ 232
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
+G D Y H ++ Q F P +VL +G D+ A DP +T G +G+ ++
Sbjct: 233 DGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLK 289
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ LI+ GGY++ +A C L GV+
Sbjct: 290 YVLQWQLA--TLILGGGGYNLANTARCW-TYLTGVI 322
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 90/292 (30%), Positives = 138/292 (47%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGG 106
HP R+ ++ + + G +P + + A+ L +FHTPDYI L EA++A
Sbjct: 17 HPLAIPRVSTVIDLCRAMGWFAPG-QYRTSPRARPAALRAFHTPDYIAALQQAEAEQAVS 75
Query: 107 KMVCD----GTVLNP---GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG--HHAQ 157
+ GT+ NP + A G +L A + V GH + P G HH
Sbjct: 76 EETRARHGLGTLPNPVFAEMYRRPATAAGGSLLAAELVARGH-----RVFNPGGGTHHGF 130
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+C+LN+ LA+ LAL GC +V +DID H+ +G A F S V IS+H
Sbjct: 131 ADRAGGFCYLNDPVLAI-LALQRLGCARVAYVDIDAHHCDGVASAFQGSQTVRMISIHEA 189
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
W P G +++ + G LN+P+ D Y + L++PA+ F P+ +
Sbjct: 190 R-RW----PFTGALED----DAGGAALNLPVARDLNDSAYALILDRLILPAVAGFRPDAV 240
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH 328
VL G D+ A DP R L+ +R+ R + +L R LL++ GGY+
Sbjct: 241 VLQCGADAVAEDPLSRLALSNCAHRDTVRALAALCPR-----LLVLGGGGYN 287
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 84/317 (26%), Positives = 152/317 (47%)
Query: 39 FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
+ P ++ V + + R + S+++ + + A + ++ SFHT Y+ L
Sbjct: 20 YSPEYVSVCDSLAKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHL 79
Query: 99 VEADKAGGKMVCDGTVLN-----PGSWGA---ALLAVGTTLSAMKHVLDGHGKIAYALVR 150
+ + G D P + G A G T++A + ++DG K+A +
Sbjct: 80 QKVSEDGDDDHPDSIEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVA---IN 136
Query: 151 PPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKV 208
G HHA+ A G+C+LN+A L + L L +++ +D+D+H+G+G + F ++KV
Sbjct: 137 WSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKV 195
Query: 209 LTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
+T+SLH + P P G V ++G G+G Y++N+P+ +G D Y H ++
Sbjct: 196 MTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEV 251
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
F P +VL +G D+ A DP +T G +G+ ++ + LI+ GGY
Sbjct: 252 YIAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKYILQWELA--TLILGGGGY 306
Query: 328 HVTYSAYCLHATLEGVL 344
++ +A C L GV+
Sbjct: 307 NLANTARCW-TYLTGVI 322
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 86/329 (26%), Positives = 159/329 (48%)
Query: 29 DTGKGLFDTG-FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL 87
D+G+ L + P ++ + + + R + S+++ + + A + ++
Sbjct: 9 DSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMA 68
Query: 88 SFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWG----AALLAVGTTLSAMKHVL 138
+FHT Y+ L + + G D P + G AA + G T++A + ++
Sbjct: 69 TFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIG-GATITAAQCLI 127
Query: 139 DGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D+D+H+G+
Sbjct: 128 DGMCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFERILYVDLDLHHGD 183
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
G + F ++KV+T+SLH + P P G V ++G G+G Y++N+P+ +G D
Sbjct: 184 GVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEK 239
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y ++ Q F P +VL +G D+ A DP +T G +G+ ++ +
Sbjct: 240 YYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKYILQWQL 296
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
LI+ GGY++ +A C L GV+
Sbjct: 297 A--TLILGGGGYNLANTARCW-TYLTGVI 322
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 276 (102.2 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 79/275 (28%), Positives = 137/275 (49%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWGA---ALLAVGTTLS 132
A + ++ +FHT Y+ L + + G D P + G A G T++
Sbjct: 100 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSVEYGLGYDCPATEGIFDYAAAVGGATIT 159
Query: 133 AMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDI 190
A + ++DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D+
Sbjct: 160 AAQCLIDGMCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFDRILYVDL 215
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPN 249
D+H+G+G + F ++KV+T+SLH + P P G V ++G G+G Y++N+P+ +
Sbjct: 216 DLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 271
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D Y H ++ F P +VL +G D+ A DP +T G +G+ ++
Sbjct: 272 GIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKY 328
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ LI+ GGY++ +A C L GV+
Sbjct: 329 ILQWQLA--TLILGGGGYNLANTARCW-TYLTGVI 360
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 279 (103.3 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 95/339 (28%), Positives = 161/339 (47%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAG-- 105
HP R++ S++ + ++ A ++ +H+ DYIN L V++D
Sbjct: 27 HPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEITRYHSDDYINFLRNVKSDNMSTF 86
Query: 106 -GKM----VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+M V + + G + L+ G +L+A + +IA + HHA+ +
Sbjct: 87 TDQMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNRQESEIAINWMGGL-HHAKKSE 145
Query: 161 ADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSW 220
A G+C+ N+ LA+ L L +V+ IDIDVH+G+G E FY +++V+T+S H HG +
Sbjct: 146 ASGFCYSNDIVLAI-LELLKHHKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFH-KHGEY 203
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P G + ++G G G Y LN+PL +G D Y ++ + +F+P +VL
Sbjct: 204 FPG---TGDLKDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIMGEVMARFQPEAVVLQC 260
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC-LHAT 339
G DS A D G LT G+ G+ V + + LL+V GGY + + C L+ T
Sbjct: 261 GADSLAGDRLGVFNLTTYGH---GKCVEYM--KSFNVPLLLVGGGGYTIRNVSRCWLYET 315
Query: 340 LEGVLNLPLA---LLSDPIAYYPEDEAFPVKVIESIKQY 375
LN ++ L D Y+ D +K + ++ +
Sbjct: 316 AIA-LNQEVSDDLPLHDYFDYFIPDYKLHIKPLAALSNF 353
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 282 (104.3 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 67/218 (30%), Positives = 112/218 (51%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +P ++ A LA G L + V+ G + ALVRPPGHH+Q A+G+C N+
Sbjct: 47 DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSV 106
Query: 171 GLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + A G +++++D D+H+G GT F VL S H HG + P + +
Sbjct: 107 AIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWP-YLRES 165
Query: 229 TVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVV-PAIQKFEPNMIVLVVGQDSSA 286
D +G G G G+ +N+P G G+ Y+ A + V+ P +F ++++ G DS+
Sbjct: 166 DADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAI 225
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
D G+ T + + + ++++ LA GGR+ V E
Sbjct: 226 GDSEGQMQATPECFAHLTQLLQVLA----GGRVCAVLE 259
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 80/284 (28%), Positives = 132/284 (46%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGG 106
E HPEN R+ I L R + + P L HT ++I+ + + A G
Sbjct: 18 EHHPENGKRLTAISDQLIRSGLDYVVRQFDSKPIDKSLLALAHTQEHIDFVFDNAPNEGE 77
Query: 107 K--MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
+ V + +V+N + + + + G + A+ V++G A+ RPPGHHA+ G+
Sbjct: 78 ENFTVGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFCATRPPGHHAEHDKGMGF 137
Query: 165 CFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
CF NN +A A G +V ++D DVH+GNGT E ++ T + + S
Sbjct: 138 CFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGT-EDIITNHFNATPEDDKGY-LFCSS 195
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+ E+ E + +N PL T + +T +PA+ KF+P +I++ G D
Sbjct: 196 YQYPLYPFEIQESDTPPI-INTPLAATTKGEQFREKLTAHWLPALHKFKPELILISAGFD 254
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ D LT YR + ++ +A+ Y GR++ V EGGY
Sbjct: 255 AHIEDEMSHVSLTEADYRWITDELKIIAEEYGKGRIVSVLEGGY 298
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 80/284 (28%), Positives = 132/284 (46%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGG 106
E HPEN R+ I L R + + P L HT ++I+ + + A G
Sbjct: 18 EHHPENGKRLTAISDQLIRSGLDYVVRQFDSKPIDKSLLALAHTQEHIDFVFDNAPNEGE 77
Query: 107 K--MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
+ V + +V+N + + + + G + A+ V++G A+ RPPGHHA+ G+
Sbjct: 78 ENFTVGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFCATRPPGHHAEHDKGMGF 137
Query: 165 CFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
CF NN +A A G +V ++D DVH+GNGT E ++ T + + S
Sbjct: 138 CFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGT-EDIITNHFNATPEDDKGY-LFCSS 195
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+ E+ E + +N PL T + +T +PA+ KF+P +I++ G D
Sbjct: 196 YQYPLYPFEIQESDTPPI-INTPLAATTKGEQFREKLTAHWLPALHKFKPELILISAGFD 254
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ D LT YR + ++ +A+ Y GR++ V EGGY
Sbjct: 255 AHIEDEMSHVSLTEADYRWITDELKIIAEEYGKGRIVSVLEGGY 298
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 282 (104.3 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 67/218 (30%), Positives = 112/218 (51%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +P ++ A LA G L + V+ G + ALVRPPGHH+Q A+G+C N+
Sbjct: 61 DAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSV 120
Query: 171 GLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + A G +++++D D+H+G GT F VL S H HG + P + +
Sbjct: 121 AIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWP-YLRES 179
Query: 229 TVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVV-PAIQKFEPNMIVLVVGQDSSA 286
D +G G G G+ +N+P G G+ Y+ A + V+ P +F ++++ G DS+
Sbjct: 180 DADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAI 239
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
D G+ T + + + ++++ LA GGR+ V E
Sbjct: 240 GDSEGQMQATPECFAHLTQLLQVLA----GGRVCAVLE 273
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 273 (101.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 62/162 (38%), Positives = 90/162 (55%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA +AVG + V G K +A+VRPPGHHA+ + A G
Sbjct: 732 GGLGVDSDTIWNELHSSGAARMAVGCVIELASRVASGELKNGFAVVRPPGHHAEESTAMG 791
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+CF N+ + + + K++++D+DVH+GNGT + FY +L ISLH + G++
Sbjct: 792 FCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPNILYISLHRYDEGNFF 851
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHA 259
P +G +E+G G G GYN+NI G GD Y+ A
Sbjct: 852 PG---SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEA 890
Score = 42 (19.8 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE++ RI++I S L+ + G A + ++ H+ ++ + L + G+ +
Sbjct: 654 HPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLYGTNPLDGQKL 712
Query: 110 CDGTVLNPGS 119
T+L S
Sbjct: 713 DPRTLLGDSS 722
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 274 (101.5 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 92/310 (29%), Positives = 146/310 (47%)
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTV-LNPGS--------WGAALLA 126
H P ++ Q FH+PDY+ L + + + N G + L
Sbjct: 53 HKAYPIEMAQ---FHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLY 109
Query: 127 VGTTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGK 184
G T+ A + + + K+ + G HHA+ A G+C++N+ L + L L +
Sbjct: 110 AGGTIDAARRL---NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGI-LELLKHHPR 165
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNL 243
V+ IDIDVH+G+G E FY +++V+T+S H +G P G V E+GE EG Y +
Sbjct: 166 VLYIDIDVHHGDGVEEAFYFTDRVMTVSFH----KFGDKFFPGTGDVKEIGEREGKFYAI 221
Query: 244 NIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
N+PL +G D + ++ ++ ++P IVL G DS A D G L++DG+ E
Sbjct: 222 NVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAEC 281
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE-GVL---NLPLALL-SDPIAYY 358
+ V+ LL+ GGY A C T+E G+L LP + +D I Y+
Sbjct: 282 VKFVKKF-----NLPLLVTGGGGYTKENVARCW--TVETGILLDTELPNEIPENDYIKYF 334
Query: 359 PEDEAFPVKV 368
D F +K+
Sbjct: 335 APD--FSLKI 342
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 69/229 (30%), Positives = 114/229 (49%)
Query: 48 EKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKA 104
+ PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E +
Sbjct: 48 DSFPEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNE 106
Query: 105 GGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
G V D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++
Sbjct: 107 GELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSL 166
Query: 161 ADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
DGYC N+ +A + A +V+++D DVH+G GT F + VL S+H G
Sbjct: 167 MDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQG 226
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVP 266
+ P H + G G+G GY +N+P G D Y+ A +++P
Sbjct: 227 RFWP-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLP 274
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 273 (101.2 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 81/266 (30%), Positives = 132/266 (49%)
Query: 80 PAQIPQLLSFHTPDYINELVEAD----KAGGKMVCDGTV-----LNPGSWGAALLAVGTT 130
PA + FH+ +Y+ L A+ K+ K + V L G + L+ G +
Sbjct: 62 PASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGS 121
Query: 131 LSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
L+A + K+ A+ G HHA+ + A G+C+ N+ L + L L +V+ +D
Sbjct: 122 LAAATKL--NKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGI-LELLKYHKRVLYVD 178
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
IDVH+G+G E FY +++V+T+S H +G P G + ++G G+G Y++N+PL +
Sbjct: 179 IDVHHGDGVEEAFYTTDRVMTVSFH----KYGDFFPGTGDLKDIGAGKGKLYSVNVPLRD 234
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D Y ++ +++F+P +VL G DS D G LT+ G+ E R RS
Sbjct: 235 GITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRS 294
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYC 335
Y+ L++V GGY A C
Sbjct: 295 ----YNVP-LMMVGGGGYTPRNVARC 315
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 273 (101.2 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 81/266 (30%), Positives = 132/266 (49%)
Query: 80 PAQIPQLLSFHTPDYINELVEAD----KAGGKMVCDGTV-----LNPGSWGAALLAVGTT 130
PA + FH+ +Y+ L A+ K+ K + V L G + L+ G +
Sbjct: 62 PASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGS 121
Query: 131 LSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
L+A + K+ A+ G HHA+ + A G+C+ N+ L + L L +V+ +D
Sbjct: 122 LAAATKL--NKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGI-LELLKYHKRVLYVD 178
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
IDVH+G+G E FY +++V+T+S H +G P G + ++G G+G Y++N+PL +
Sbjct: 179 IDVHHGDGVEEAFYTTDRVMTVSFH----KYGDFFPGTGDLKDIGAGKGKLYSVNVPLRD 234
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D Y ++ +++F+P +VL G DS D G LT+ G+ E R RS
Sbjct: 235 GITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRS 294
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYC 335
Y+ L++V GGY A C
Sbjct: 295 ----YNVP-LMMVGGGGYTPRNVARC 315
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 83/317 (26%), Positives = 151/317 (47%)
Query: 39 FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
+ P ++ V + + R + S+++ + + A + ++ SFHT Y+ L
Sbjct: 20 YSPEYVSVCDSLAKVPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHL 79
Query: 99 VEADKAGGKMVCDGTVLN-----PGSWGA---ALLAVGTTLSAMKHVLDGHGKIAYALVR 150
+ + G D P + G A G T++A + ++DG K+A +
Sbjct: 80 QKVSEDGDDDHPDSIEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVA---IN 136
Query: 151 PPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKV 208
G HHA+ A G+C+LN+A L + L L +++ +D+D+H+G+G + F ++KV
Sbjct: 137 WSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKV 195
Query: 209 LTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
+T+SLH + P P G V ++G G+G Y++N+P+ + D Y H ++
Sbjct: 196 MTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEV 251
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
F P +VL +G D+ A DP +T G +G+ ++ + LI+ GGY
Sbjct: 252 YIAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKYILQWELA--TLILGGGGY 306
Query: 328 HVTYSAYCLHATLEGVL 344
++ +A C L GV+
Sbjct: 307 NLANTARCW-TYLTGVI 322
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 270 (100.1 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 81/297 (27%), Positives = 141/297 (47%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGGK 107
HP RI+ ++L + ++ PA+ L FH DY++ L + + +
Sbjct: 36 HPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQ 95
Query: 108 M-------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPT 159
+ V + + G + G ++ + HG A+ G HHA+
Sbjct: 96 IRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKL--NHGLCDIAINWAGGLHHAKKC 153
Query: 160 MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
A G+C++N+ LA+ L L +V+ +DID+H+G+G E FY +++V+T+S H
Sbjct: 154 EASGFCYVNDIVLAI-LELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSFH----K 208
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQK-FEPNMIVL 278
+G P G + ++G G G Y+LN+PL +G D Y H + + ++ + + F P +VL
Sbjct: 209 FGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESY-HLLFKPIMGKVMEIFRPGAVVL 267
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
G DS + D G L++ G+ E + +RS LL++ GGY + A C
Sbjct: 268 QCGADSLSGDRLGCFNLSIKGHAECVKFMRSF-----NVPLLLLGGGGYTIRNVARC 319
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 268 (99.4 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 86/308 (27%), Positives = 146/308 (47%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEAD----- 102
HP RI+ S++ + + + PA ++ FHT +YI+ L V D
Sbjct: 38 HPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLEMF 97
Query: 103 -KAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPT 159
+ K V D + G + ++ G ++ + GK A+ G HHA+ +
Sbjct: 98 KRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARL--NRGKCDVAVNYAGGLHHAKKS 155
Query: 160 MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
A G+C+LN+ L + + L +V+ IDIDVH+G+G E FY +++V+T S H
Sbjct: 156 EASGFCYLNDIVLGI-IELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFH----K 210
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
+G P G + ++G G G Y +N+PL +G D Y ++ ++ ++P+ +VL
Sbjct: 211 YGEFFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQ 270
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA--YCLH 337
G DS + D G L+M+G+ V+S G +++V GGY + A +C
Sbjct: 271 CGGDSLSGDRLGCFNLSMEGHANCVNYVKSF-----GIPMMVVGGGGYTMRNVARTWCFE 325
Query: 338 ATLEGVLN 345
G+LN
Sbjct: 326 T---GLLN 330
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 259 (96.2 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 199 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + V+S +L++ GGY + A
Sbjct: 255 SAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNVA 309
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 310 RCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Score = 39 (18.8 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 253 (94.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 62/186 (33%), Positives = 92/186 (49%)
Query: 90 HTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+P+Y++ + E G + + D +P ++ A LA G L + VL G +
Sbjct: 64 HSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQ 123
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGF 202
ALVRPPGHH Q A+G+C NN +A A G +++V+D DVH+G G F
Sbjct: 124 NGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLF 183
Query: 203 YRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAM 260
VL S H HG + P + D +G G+G G+ +N+P G G+ YV A
Sbjct: 184 EDDPSVLYFSWHRYEHGRFWP-FLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAF 242
Query: 261 TELVVP 266
L++P
Sbjct: 243 LHLLLP 248
Score = 54 (24.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 324 EGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
EGGYH+ A + T++ +L P LS P+A
Sbjct: 252 EGGYHLESLAESVCMTVQTLLGDPAPPLSGPMA 284
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 257 (95.5 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 199 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + V+S +L++ GGY + A
Sbjct: 255 SAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNVA 309
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 310 RCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Score = 39 (18.8 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 257 (95.5 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 199 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + V+S +L++ GGY + A
Sbjct: 255 SAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNVA 309
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 310 RCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Score = 39 (18.8 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 257 (95.5 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 199 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + V+S +L++ GGY + A
Sbjct: 255 SAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNVA 309
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 310 RCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Score = 39 (18.8 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 257 (95.5 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 199 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + V+S +L++ GGY + A
Sbjct: 255 SAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNVA 309
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 310 RCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Score = 39 (18.8 bits), Expect = 9.3e-21, Sum P(2) = 9.3e-21
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 262 (97.3 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 82/308 (26%), Positives = 138/308 (44%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
D G + HP R+ ++ + Y++ + FHT DY+N L
Sbjct: 38 DVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVFHTEDYVNFLQ 97
Query: 100 EADKAGGKMVCDGTV--LN-----P---GSWGAALLAVGTTLSAMKHVLDGHGKIAYALV 149
G + D + N P G W L G ++ + + H K+ ++
Sbjct: 98 TVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRL--NH-KMNDIVI 154
Query: 150 RPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNK 207
PG HHA+ + A G+C++N+ L + L L +V+ IDID+H+G+G E F S++
Sbjct: 155 NWPGGLHHAKKSEASGFCYVNDIVLGI-LELLKYHKRVLYIDIDIHHGDGVQEAFNNSDR 213
Query: 208 VLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
V+T+S H +G P +G++ + G G G + +N+PL D Y+ ++
Sbjct: 214 VMTVSFHR----FGQYFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGV 269
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ F P IVL G DS D G+ L+ + + + V+SL G L+++ GGY
Sbjct: 270 EENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSL-----GKPLMVLGGGGY 324
Query: 328 HVTYSAYC 335
+ A C
Sbjct: 325 TLRNVARC 332
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 256 (95.2 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 68/234 (29%), Positives = 116/234 (49%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 199
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ ++P
Sbjct: 200 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMSKVMEMYQP 255
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + ++S LL++ GGY + A
Sbjct: 256 SAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSF-----NLPLLMLGGGGYTIKNVA 310
Query: 334 YCLHATLEGVLN--LPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
C L+ +P L +D Y+ D + Q ND + +K
Sbjct: 311 RCWTFETAVALDSTIPNELPYNDYFEYFGPDFKLHISPFNMTNQNTNDYLEKIK 364
Score = 39 (18.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 29 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 77
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 257 (95.5 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 50 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 108
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 109 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQP 164
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + V+S +L++ GGY + A
Sbjct: 165 SAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNVA 219
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 220 RCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 273
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 260 (96.6 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 92/364 (25%), Positives = 162/364 (44%)
Query: 34 LFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPD 93
LF + D G + HP RI+ ++L + + + A ++ +H+ D
Sbjct: 17 LFYSSGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDD 76
Query: 94 YINEL--VEADKAG--GKM-----VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
YI L + D K V + + G + L+ G ++ V +
Sbjct: 77 YIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQT 136
Query: 145 AYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFY 203
A+ G HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY
Sbjct: 137 DIAVNWAGGLHHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFY 195
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
+++V+T+S H +G P G + ++G G+G Y +N PL +G D Y +
Sbjct: 196 TTDRVMTVSFH----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPV 251
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
+ ++ F+P+ +VL G DS + D G LT+ G+ + V+S +L++
Sbjct: 252 MSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSF-----NLPMLMLG 306
Query: 324 EGGYHVTYSAYC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
GGY + A C + T + +P L +D Y+ D + Q N+ +
Sbjct: 307 GGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYL 366
Query: 381 PFLK 384
+K
Sbjct: 367 EKIK 370
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 261 (96.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 93/332 (28%), Positives = 156/332 (46%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEAD----- 102
HP RI+ S++ + + + PA ++ FHT +YI+ + V D
Sbjct: 37 HPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFHTDEYIDFISRVNPDNLDLF 96
Query: 103 -KAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPT 159
K K V D + G + ++ G ++ + GK A+ G HHA+ +
Sbjct: 97 TKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARL--NRGKCDIAINYAGGLHHAKKS 154
Query: 160 MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
A G+C+LN+ L + + L +V+ IDIDVH+G+G E FY +++V+T S H
Sbjct: 155 EASGFCYLNDIVLGI-IELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFH----K 209
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
+G P G + ++G G+G +++N+PL +G D Y ++ I+ ++P+ IVL
Sbjct: 210 YGEFFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQ 269
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G DS + D G L+M+G+ V+S +++V GGY + A A
Sbjct: 270 CGGDSLSGDRLGCFNLSMNGHANCINYVKSF-----NIPMMVVGGGGYTMRNVARTW-AY 323
Query: 340 LEGVLN---LPLAL-LSDPIAYYPEDEAFPVK 367
G+LN LP L ++ YY D V+
Sbjct: 324 ESGLLNNVKLPDELPYNEYYEYYGPDYKLDVR 355
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 261 (96.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 93/332 (28%), Positives = 156/332 (46%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEAD----- 102
HP RI+ S++ + + + PA ++ FHT +YI+ + V D
Sbjct: 37 HPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQFHTDEYIDFISRVNPDNLDLF 96
Query: 103 -KAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPT 159
K K V D + G + ++ G ++ + GK A+ G HHA+ +
Sbjct: 97 TKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARL--NRGKCDIAINYAGGLHHAKKS 154
Query: 160 MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
A G+C+LN+ L + + L +V+ IDIDVH+G+G E FY +++V+T S H
Sbjct: 155 EASGFCYLNDIVLGI-IELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFH----K 209
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
+G P G + ++G G+G +++N+PL +G D Y ++ I+ ++P+ IVL
Sbjct: 210 YGEFFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQ 269
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G DS + D G L+M+G+ V+S +++V GGY + A A
Sbjct: 270 CGGDSLSGDRLGCFNLSMNGHANCINYVKSF-----NIPMMVVGGGGYTMRNVARTW-AY 323
Query: 340 LEGVLN---LPLAL-LSDPIAYYPEDEAFPVK 367
G+LN LP L ++ YY D V+
Sbjct: 324 ESGLLNNVKLPDELPYNEYYEYYGPDYKLDVR 355
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 255 (94.8 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 67/227 (29%), Positives = 117/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 199
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 200 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 255
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + +V++ LL++ GGY + A
Sbjct: 256 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 310
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 311 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 355
Score = 39 (18.8 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 32 KGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHT 91
K +F +G D G + HP RI+ ++L + + + A ++ +H+
Sbjct: 12 KCVFSSG-DIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHS 70
Query: 92 PDYINEL 98
+YI L
Sbjct: 71 DEYIKFL 77
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 255 (94.8 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 90/298 (30%), Positives = 140/298 (46%)
Query: 80 PAQIPQ--LLSFHTPDYINEL--VEADKAGG--KM-----VCDGTVLNPGSWGAALLAVG 128
P Q Q + FH+ DYI+ L V + G K V D + PG + G
Sbjct: 50 PYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTG 109
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
+L + + KI + G HHA+ A G+C++N+ + + L L +V+
Sbjct: 110 ASLQGATQL---NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYHPRVL 165
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDID+H+G+G E FY +++V+T+S H +G++ P G + E+G G Y LN+P
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFH-KYGNY--FFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y H ++ + ++P IVL G DS D G L++ G+ E
Sbjct: 223 LRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
V+S LL++ GGY V A C T E L + A+ S+ + Y E F
Sbjct: 283 VKSF-----NIPLLVLGGGGYTVRNVARCW--TYETSLLVDEAI-SEELPYSEYFEYF 332
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 255 (94.8 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 90/298 (30%), Positives = 140/298 (46%)
Query: 80 PAQIPQ--LLSFHTPDYINEL--VEADKAGG--KM-----VCDGTVLNPGSWGAALLAVG 128
P Q Q + FH+ DYI+ L V + G K V D + PG + G
Sbjct: 50 PYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTG 109
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
+L + + KI + G HHA+ A G+C++N+ + + L L +V+
Sbjct: 110 ASLQGATQL---NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYHPRVL 165
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDID+H+G+G E FY +++V+T+S H +G++ P G + E+G G Y LN+P
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFH-KYGNY--FFPGTGDMYEVGAESGRYYALNVP 222
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y H ++ + ++P IVL G DS D G L++ G+ E
Sbjct: 223 LRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEY 282
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
V+S LL++ GGY V A C T E L + A+ S+ + Y E F
Sbjct: 283 VKSF-----NIPLLVLGGGGYTVRNVARCW--TYETSLLVDEAI-SEELPYSEYFEYF 332
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 255 (94.8 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 67/227 (29%), Positives = 117/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 111 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 169
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 170 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 225
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + +V++ LL++ GGY + A
Sbjct: 226 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 280
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 281 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 325
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 255 (94.8 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 67/227 (29%), Positives = 117/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 111 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 169
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 170 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 225
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + +V++ LL++ GGY + A
Sbjct: 226 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 280
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 281 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 325
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 251 (93.4 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 68/235 (28%), Positives = 118/235 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 199 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTM-DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
+ +VL G DS + D G LT+ +G+ + V+S +L++ GGY +
Sbjct: 255 SAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNV 309
Query: 333 AYC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
A C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 310 ARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 364
Score = 39 (18.8 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 255 (94.8 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 67/227 (29%), Positives = 117/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 199
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 200 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 255
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + +V++ LL++ GGY + A
Sbjct: 256 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 310
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 311 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 355
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 255 (94.8 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 67/227 (29%), Positives = 117/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 199
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 200 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 255
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + +V++ LL++ GGY + A
Sbjct: 256 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 310
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 311 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 355
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 251 (93.4 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 68/235 (28%), Positives = 118/235 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 199 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTM-DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
+ +VL G DS + D G LT+ +G+ + V+S +L++ GGY +
Sbjct: 255 SAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNV 309
Query: 333 AYC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
A C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 310 ARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 364
Score = 39 (18.8 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 253 (94.1 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 90/298 (30%), Positives = 139/298 (46%)
Query: 80 PAQIPQ--LLSFHTPDYINEL--VEADKAGG--KM-----VCDGTVLNPGSWGAALLAVG 128
P Q Q + FH+ DYI+ L V G K V D + PG + G
Sbjct: 50 PYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTG 109
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
+L + + KI + G HHA+ A G+C++N+ + + L L +V+
Sbjct: 110 ASLQGATQL---NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYHPRVL 165
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDID+H+G+G E FY +++V+T+S H +G++ P G + E+G G Y LN+P
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFH-KYGNY--FFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y H ++ + ++P IVL G DS D G L++ G+ E
Sbjct: 223 LRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
V+S LL++ GGY V A C T E L + A+ S+ + Y E F
Sbjct: 283 VKSF-----NIPLLVLGGGGYTVRNVARCW--TYETSLLVEEAI-SEELPYSEYFEYF 332
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 251 (93.4 bits), Expect = 8.5e-20, Sum P(2) = 8.5e-20
Identities = 68/235 (28%), Positives = 118/235 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ F+P
Sbjct: 199 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTM-DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
+ +VL G DS + D G LT+ +G+ + V+S +L++ GGY +
Sbjct: 255 SAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSF-----NLPMLMLGGGGYTIRNV 309
Query: 333 AYC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
A C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 310 ARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 364
Score = 39 (18.8 bits), Expect = 8.5e-20, Sum P(2) = 8.5e-20
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 253 (94.1 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 90/298 (30%), Positives = 139/298 (46%)
Query: 80 PAQIPQ--LLSFHTPDYINEL--VEADKAGG--KM-----VCDGTVLNPGSWGAALLAVG 128
P Q Q + FH+ DYI+ L V G K V D + PG + G
Sbjct: 50 PYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTG 109
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
+L + + KI + G HHA+ A G+C++N+ + + L L +V+
Sbjct: 110 ASLQGATQL---NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYHPRVL 165
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDID+H+G+G E FY +++V+T+S H +G++ P G + E+G G Y LN+P
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFH-KYGNY--FFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y H ++ + ++P IVL G DS D G L++ G+ E
Sbjct: 223 LRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
V+S LL++ GGY V A C T E L + A+ S+ + Y E F
Sbjct: 283 VKSF-----NIPLLVLGGGGYTVRNVARCW--TYETSLLVEEAI-SEELPYSEYFEYF 332
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 253 (94.1 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 90/298 (30%), Positives = 139/298 (46%)
Query: 80 PAQIPQ--LLSFHTPDYINEL--VEADKAGG--KM-----VCDGTVLNPGSWGAALLAVG 128
P Q Q + FH+ DYI+ L V G K V D + PG + G
Sbjct: 50 PYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTG 109
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
+L + + KI + G HHA+ A G+C++N+ + + L L +V+
Sbjct: 110 ASLQGATQL---NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYHPRVL 165
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDID+H+G+G E FY +++V+T+S H +G++ P G + E+G G Y LN+P
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFH-KYGNY--FFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y H ++ + ++P IVL G DS D G L++ G+ E
Sbjct: 223 LRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
V+S LL++ GGY V A C T E L + A+ S+ + Y E F
Sbjct: 283 VKSF-----NIPLLVLGGGGYTVRNVARCW--TYETSLLVEEAI-SEELPYSEYFEYF 332
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 236 (88.1 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 53/156 (33%), Positives = 87/156 (55%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ A G+C++N+ + + L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 59 HHAKKFEASGFCYVNDIVIGI-LELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSF 117
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G++ P G + E+G G Y LN+PL +G D+ Y H ++ + ++P
Sbjct: 118 H-KYGNY--FFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQP 174
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
IVL G DS D G L++ G+ E V+S
Sbjct: 175 TCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 210
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 255 (94.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 67/227 (29%), Positives = 117/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 203 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 261
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 262 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 317
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + +V++ LL++ GGY + A
Sbjct: 318 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 372
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 373 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 417
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 252 (93.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 90/298 (30%), Positives = 139/298 (46%)
Query: 80 PAQIPQ--LLSFHTPDYINEL--VEADKAGG--KM-----VCDGTVLNPGSWGAALLAVG 128
P Q Q + FH+ DYI+ L V G K V D + PG + G
Sbjct: 50 PYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTG 109
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
+L + + KI + G HHA+ A G+C++N+ + + L L +V+
Sbjct: 110 ASLQGATQL---NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYHPRVL 165
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDID+H+G+G E FY +++V+T+S H +G++ P G + E+G G Y LN+P
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFH-KYGNY--FFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y H ++ + ++P IVL G DS D G L++ G+ E
Sbjct: 223 LRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
V+S LL++ GGY V A C T E L + A+ S+ + Y E F
Sbjct: 283 VKSF-----NIPLLVLGGGGYTVRNVARCW--TYETSLLVEEAI-SEELPYSEYFEYF 332
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 252 (93.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 90/298 (30%), Positives = 139/298 (46%)
Query: 80 PAQIPQ--LLSFHTPDYINEL--VEADKAGG--KM-----VCDGTVLNPGSWGAALLAVG 128
P Q Q + FH+ DYI+ L V G K V D + PG + G
Sbjct: 50 PYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTG 109
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
+L + + KI + G HHA+ A G+C++N+ + + L L +V+
Sbjct: 110 ASLQGATQL---NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYHPRVL 165
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDID+H+G+G E FY +++V+T+S H +G++ P G + E+G G Y LN+P
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFH-KYGNY--FFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y H ++ + ++P IVL G DS D G L++ G+ E
Sbjct: 223 LRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
V+S LL++ GGY V A C T E L + A+ S+ + Y E F
Sbjct: 283 VKSF-----NIPLLVLGGGGYTVRNVARCW--TYETSLLVEEAI-SEELPYSEYFEYF 332
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 252 (93.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 90/298 (30%), Positives = 139/298 (46%)
Query: 80 PAQIPQ--LLSFHTPDYINEL--VEADKAGG--KM-----VCDGTVLNPGSWGAALLAVG 128
P Q Q + FH+ DYI+ L V G K V D + PG + G
Sbjct: 50 PYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTG 109
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
+L + + KI + G HHA+ A G+C++N+ + + L L +V+
Sbjct: 110 ASLQGATQL---NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGI-LELLKYHPRVL 165
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDID+H+G+G E FY +++V+T+S H +G++ P G + E+G G Y LN+P
Sbjct: 166 YIDIDIHHGDGVQEAFYLTDRVMTVSFH-KYGNY--FFPGTGDMYEVGAESGRYYCLNVP 222
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y H ++ + ++P IVL G DS D G L++ G+ E
Sbjct: 223 LRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEY 282
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
V+S LL++ GGY V A C T E L + A+ S+ + Y E F
Sbjct: 283 VKSF-----NIPLLVLGGGGYTVRNVARCW--TYETSLLVEEAI-SEELPYSEYFEYF 332
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 255 (94.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 67/227 (29%), Positives = 117/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 235 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 293
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 294 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 349
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + +V++ LL++ GGY + A
Sbjct: 350 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 404
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 405 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 449
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 259 (96.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 79/268 (29%), Positives = 130/268 (48%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGK---------MVCDGTVLNPGSWGAALLAVGTTL 131
A I ++ FHT Y+ L + + G + D V+ G + A G TL
Sbjct: 1061 ASIEEMAVFHTDSYLQHLHKISQDGDNDDPQSADFGLGYDCPVVE-GIFDYAAAVGGATL 1119
Query: 132 SAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDI 190
+A +++LDG K A+ G HHA+ A G+C++N+A L + L L +V+ +D+
Sbjct: 1120 TAAQNLLDG--KCDVAINWAGGWHHAKKDEASGFCYVNDAVLGI-LKLREKYDRVLYVDV 1176
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPN 249
D+H+G+G + F ++KV+T+SLH + P P G V + G G+G Y +N+P +
Sbjct: 1177 DLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVTDTGLGKGRWYAVNVPFED 1232
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D Y T ++ F P +V+ +G D+ A DP +T G + +
Sbjct: 1233 GVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMCSFNMTSVG------VAKC 1286
Query: 310 LADRYSGGRL--LIVQEGGYHVTYSAYC 335
L G L L++ GGY++ +A C
Sbjct: 1287 LT-YILGWELPTLLLGGGGYNLANTARC 1313
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 250 (93.1 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 69/211 (32%), Positives = 109/211 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ A G+C++N+ + + L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGI-LELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSF 192
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G++ P G + E+G G Y LN+PL +G D+ Y H ++ + ++P
Sbjct: 193 H-KYGNY--FFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQP 249
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
IVL G DS D G L++ G+ E V+S LL++ GGY V A
Sbjct: 250 TCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSF-----NIPLLVLGGGGYTVRNVA 304
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
C T E L + A+ S+ + Y E F
Sbjct: 305 RCW--TYETSLLVEEAI-SEELPYSEYFEYF 332
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 251 (93.4 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 66/227 (29%), Positives = 116/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 199
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 200 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 255
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + + ++ LL++ GGY + A
Sbjct: 256 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTF-----NLPLLMLGGGGYTIRNVA 310
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 311 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 355
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 251 (93.4 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 74/262 (28%), Positives = 124/262 (47%)
Query: 85 QLLSFHTPDYIN--ELVEADKAG--GKMVCDGTVLN--P---GSWGAALLAVGTTLSAMK 135
+L +FH+ DYIN +LV D K + V P G + ++ G ++
Sbjct: 58 ELTNFHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAV 117
Query: 136 HVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVH 193
V +A + G HHA+ + A G+C+ N+ L++ L L +V+ IDID+H
Sbjct: 118 KVNSKESDVA---INWAGGLHHAKKSEASGFCYTNDIVLSI-LELLKHHERVLYIDIDIH 173
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
+G+G E FY +++V+T+S H +G P G V ++G +G Y+LN PL +G D
Sbjct: 174 HGDGVEEAFYTTDRVMTVSFH----KYGDYFPGTGDVKDIGADKGKYYSLNFPLKDGIDD 229
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y ++ + + P +V+ G DS D G LT+ G+ + ++S
Sbjct: 230 ESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSF--- 286
Query: 314 YSGGRLLIVQEGGYHVTYSAYC 335
L+++ GGY + A C
Sbjct: 287 --NVPLVVLGGGGYTIKNVARC 306
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 251 (93.4 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 61/182 (33%), Positives = 98/182 (53%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ L + L L +V+ IDIDVH+G+G E FY +++V+T+S
Sbjct: 138 HHAKKSEASGFCYVNDIVLGI-LELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 196
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +NIPL +G D Y ++ ++ F+P
Sbjct: 197 H----KYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQP 252
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+VL G DS D G LT+ G+ G+ V +Y+ L+V GGY + +
Sbjct: 253 AAVVLQCGADSLTGDRLGCFNLTVKGH---GKCVE-FVKKYNLP-FLMVGGGGYTIRNVS 307
Query: 334 YC 335
C
Sbjct: 308 RC 309
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 232 (86.7 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 64/206 (31%), Positives = 106/206 (51%)
Query: 141 HGKI-AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTA 199
H I AYAL H A G+C+LN+A L + L L +++ +D+D+H+G+G
Sbjct: 42 HSLIEAYAL-----HKQMRDEASGFCYLNDAVLGI-LRLRRKFERILYVDLDLHHGDGVE 95
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ F ++KV+T+SLH + P P G V ++G G+G Y++N+P+ +G D Y
Sbjct: 96 DAFSFTSKVMTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQ 151
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
++ Q F P +VL +G D+ A DP +T G +G+ ++ +
Sbjct: 152 ICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKYILQWQLA-- 206
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
LI+ GGY++ +A C L GV+
Sbjct: 207 TLILGGGGYNLANTARCW-TYLTGVI 231
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 247 (92.0 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 95/347 (27%), Positives = 156/347 (44%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGG 106
+HP R++ + +++ + ++ + + A + HT +YI L V D
Sbjct: 24 QHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRCHTDEYIEFLWRVTPDTMEK 83
Query: 107 ------KM-VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG--HHAQ 157
K V D + G + ++ G ++ A + + G+ +IA + G HHA+
Sbjct: 84 FQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSGNAEIA---INWAGGLHHAK 140
Query: 158 PTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
A G+C++N+ LA L L +V+ IDIDVH+G+G E FY +++V+T S H
Sbjct: 141 KREASGFCYVNDIALAA-LELLKYHQRVLYIDIDVHHGDGVEEFFYTTDRVMTCSFH--- 196
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIV 277
+G P G + + G G G Y +N+PL +G D Y ++ +Q F P ++
Sbjct: 197 -KFGEYFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISHIMQWFRPEAVI 255
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV-------T 330
L G DS A D G L+M G+ V+S ++ V GGY V T
Sbjct: 256 LQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSF-----NLPMICVGGGGYTVRNVARVWT 310
Query: 331 YSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
Y L A E NLP +D + YY D + + V+ + + N
Sbjct: 311 YETGLL-AGEELDENLPY---NDYLQYYGPD--YKLNVLSNNMENHN 351
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 249 (92.7 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 59/182 (32%), Positives = 100/182 (54%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ L + L L +V+ IDIDVH+G+G E FY +++V+T+S
Sbjct: 152 HHAKKSEASGFCYVNDIVLGI-LELLKMFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 210
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G +G Y LN+PL +G D + L+ ++ ++P
Sbjct: 211 H----KFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQP 266
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+VL G DS + D G L++ G+ + R +RS Y+ L+++ GGY + A
Sbjct: 267 EAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRS----YNVP-LMVLGGGGYTIRNVA 321
Query: 334 YC 335
C
Sbjct: 322 RC 323
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 231 (86.4 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 47/120 (39%), Positives = 72/120 (60%)
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYR 204
+A+VRPPGHHA+ + A G+CF N+ + + + K++++D+DVH+GNGT + FY
Sbjct: 5 FAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYA 64
Query: 205 SNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHA 259
+L ISLH + G++ P +G +E+G G G GYN+NI G GD Y+ A
Sbjct: 65 DPSILYISLHRYDEGNFFPG---SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEA 121
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 252 (93.8 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 83/298 (27%), Positives = 137/298 (45%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL- 98
D G + HP RI+ S++ + + + PA ++ FHT +YI+ L
Sbjct: 35 DVGNYAYVSGHPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPASKFEMTQFHTDEYIDFLS 94
Query: 99 -VEAD------KAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
V D K K V D + G + ++ G ++ + K A+
Sbjct: 95 KVTPDNMDAFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARL--NRNKCDIAVNW 152
Query: 151 PPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
G HHA+ + A G+C++N+ L + L L +V+ +DIDVH+G+G E FY +++V+
Sbjct: 153 AGGLHHAKKSEASGFCYVNDIVLGI-LELLRFKQRVLYVDIDVHHGDGVEEAFYTTDRVM 211
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
T+S H +G P G + ++G G+G Y +N PL +G D Y ++ ++
Sbjct: 212 TVSFH----KYGEYFPGTGELRDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPVIKSVME 267
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ P +VL G DS + D G L+M G+ + V+S LIV GGY
Sbjct: 268 WYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSF-----NLPTLIVGGGGY 320
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 248 (92.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 67/227 (29%), Positives = 115/227 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 139 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 197
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N PL +G D Y ++ ++ ++P
Sbjct: 198 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQP 253
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ I L G DS + D G LT+ G+ + ++ +Y+ LL++ GGY + A
Sbjct: 254 SAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMK----QYNLP-LLLMGGGGYTIRNVA 308
Query: 334 YCLHATLEGVLNLPLAL---LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C L + +A +D Y+ D F + + S QN
Sbjct: 309 RCWTYETSTALGVEIANELPYNDYFEYFGPD--FKLHISPSNMTNQN 353
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 245 (91.3 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 79/292 (27%), Positives = 136/292 (46%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN----------ELV 99
H RI+ S++ + + + PA +L FHT +YI+ L
Sbjct: 36 HCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQFHTDEYIDFIDRVTPDNLHLF 95
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG--HHAQ 157
E ++ + D V + G ++ G ++ + G IA + G HHA+
Sbjct: 96 EREQVIFNVGDDCPVFD-GLGEFCKISCGGSMEGAARLNRGQADIA---INYAGGLHHAK 151
Query: 158 PTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
+ A G+C+ N+ L + + L +V+ ID DVH+G+G E FY +++V+T S H
Sbjct: 152 KSEASGFCYTNDIVLGI-IELLRYHPRVLYIDTDVHHGDGVEEAFYTNDRVMTCSFH--- 207
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIV 277
+G P G + ++G G+G + +NIPL +G D Y ++ ++ ++P+ IV
Sbjct: 208 -KFGEFFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAIV 266
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
L G DS + D G L+M G+ VRSL G ++++ GGY +
Sbjct: 267 LQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSL-----GVPVMVLGGGGYTI 313
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 245 (91.3 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 79/292 (27%), Positives = 136/292 (46%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN----------ELV 99
H RI+ S++ + + + PA +L FHT +YI+ L
Sbjct: 36 HCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQFHTDEYIDFIDRVTPDNLHLF 95
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG--HHAQ 157
E ++ + D V + G ++ G ++ + G IA + G HHA+
Sbjct: 96 EREQVIFNVGDDCPVFD-GLGEFCKISCGGSMEGAARLNRGQADIA---INYAGGLHHAK 151
Query: 158 PTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
+ A G+C+ N+ L + + L +V+ ID DVH+G+G E FY +++V+T S H
Sbjct: 152 KSEASGFCYTNDIVLGI-IELLRYHPRVLYIDTDVHHGDGVEEAFYTNDRVMTCSFH--- 207
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIV 277
+G P G + ++G G+G + +NIPL +G D Y ++ ++ ++P+ IV
Sbjct: 208 -KFGEFFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAIV 266
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
L G DS + D G L+M G+ VRSL G ++++ GGY +
Sbjct: 267 LQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSL-----GVPVMVLGGGGYTI 313
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 243 (90.6 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 62/187 (33%), Positives = 96/187 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ A G+C++N+ + + L L +V+ IDIDVH+G+G E FY +++V+T S
Sbjct: 139 HHAKKFEASGFCYVNDIVIGI-LELLKYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTASF 197
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G++ P G + E+G G Y++N+PL G D+ Y ++ + + P
Sbjct: 198 H-KYGNY--FFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRP 254
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
IVL G DS A D G L+ G+ E + V+ L L+V GGY + A
Sbjct: 255 TAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKEL-----NVPTLVVGGGGYTLRNVA 309
Query: 334 YC-LHAT 339
C H T
Sbjct: 310 RCWTHET 316
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 225 (84.3 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 57/189 (30%), Positives = 99/189 (52%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWGA---ALLAVGTTLS 132
A + ++ +FHT Y+ L + + G D P + G A G T++
Sbjct: 62 ASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAVGGATIT 121
Query: 133 AMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDI 190
A + ++DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D+
Sbjct: 122 AAQCLIDGMCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFDRILYVDL 177
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPN 249
D+H+G+G + F ++KV+T+SLH + P P G V ++G G+G Y++N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQD 233
Query: 250 GTGDRGYVH 258
G D Y H
Sbjct: 234 GIQDEKYYH 242
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 242 (90.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 68/211 (32%), Positives = 107/211 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ A G+C++N+ +++ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 134 HHAKKFEASGFCYVNDIVISI-LELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSF 192
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G++ P G + E+G G Y LN+PL +G D+ Y ++ + ++P
Sbjct: 193 H-KYGNY--FFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQP 249
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
IVL G DS D G L++ G+ E V+ LL++ GGY V A
Sbjct: 250 TCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIP-----LLVLGGGGYTVRNVA 304
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAF 364
C T E L L +SD + Y E F
Sbjct: 305 RCW--TFETSL-LVEESISDELPYSEYFEYF 332
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 171 (65.3 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 45/137 (32%), Positives = 66/137 (48%)
Query: 106 GKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA------QP 158
G+ DG T ++ S AA + G T A+ +V+ G+ A+ RPPGHHA
Sbjct: 1182 GEQCEDGDTFVSKLSLHAAKRSAGATCQAIDNVMKGNVTSAFVAARPPGHHAGRDGLTSG 1241
Query: 159 TMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
T + G+C LN+ + + A L K+ +ID DVH+GNGT E +S+HM
Sbjct: 1242 TSSQGFCLLNHVCIGAKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFE 1301
Query: 218 GSWGPSHPQNGTVDELG 234
+ P G V +G
Sbjct: 1302 EGFYPG--SGGGVGSIG 1316
Score = 135 (52.6 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 30/104 (28%), Positives = 55/104 (52%)
Query: 240 GYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
G +NIPL + ++ A + +++ + ++P +I++ G D+ D CL +
Sbjct: 1383 GNIVNIPLDPKSSASSFLKAFS-IIIDKLNDYQPELILISCGFDAHMEDHLASLCLLEEN 1441
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
Y E+ R +R +ADR+ GRL+ + EGGY++ C A L +
Sbjct: 1442 YVEITRSLRRVADRWCKGRLVSILEGGYNINALRQCTIAHLSAL 1485
Score = 45 (20.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 19/91 (20%), Positives = 38/91 (41%)
Query: 46 VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ--LLSFHTPDYINELVE-AD 102
V + HPE+ R+ +++ + P +I +L+ H+P+Y+ L + +
Sbjct: 1074 VPDDHPESPKRLSSVIKAINDFSRQSDRLIIKNDPEEINDKWILTVHSPEYLRLLEDLTE 1133
Query: 103 KAGGKMVCDGTVLNPG-SWGAALLAVGTTLS 132
K + V N G S G + T ++
Sbjct: 1134 KLDANEIRPLNVNNDGASTGINQFSTSTPIT 1164
Score = 43 (20.2 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNI 245
Y +K+ I ++HG NGT + L +GF Y L+I
Sbjct: 1264 YNLDKIAIIDFDVHHG--------NGTEEILSNDQGF-YFLSI 1297
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 219 (82.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 63/241 (26%), Positives = 120/241 (49%)
Query: 29 DTGKGLFDTG-FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL 87
D+G+ L + P ++ + + + R + S+++ + + A + ++
Sbjct: 9 DSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMA 68
Query: 88 SFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWG----AALLAVGTTLSAMKHVL 138
+FHT Y+ L + + G D P + G AA + G T++A + ++
Sbjct: 69 TFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIG-GATITAAQCLI 127
Query: 139 DGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D+D+H+G+
Sbjct: 128 DGMCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFERILYVDLDLHHGD 183
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
G + F ++KV+T+SLH + P P G V ++G G+G Y++N+P+ +G D
Sbjct: 184 GVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEK 239
Query: 256 Y 256
Y
Sbjct: 240 Y 240
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 238 (88.8 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 66/227 (29%), Positives = 116/227 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVS- 198
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
S + P G + ++G G+G Y +N P+ +G D Y ++ ++ ++P
Sbjct: 199 ---EVSMVNNFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQP 255
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G+ + +V++ LL++ GGY + A
Sbjct: 256 SAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 310
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 311 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 355
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 217 (81.4 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 66/258 (25%), Positives = 126/258 (48%)
Query: 29 DTGKGLFDTG-FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL 87
D+G+ L + P ++ + + + R + S+++ + + A + ++
Sbjct: 9 DSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMA 68
Query: 88 SFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWG----AALLAVGTTLSAMKHVL 138
+FHT Y+ L + + G D P + G AA + G T++A + ++
Sbjct: 69 TFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIG-GATITAAQCLI 127
Query: 139 DGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D+D+H+G+
Sbjct: 128 DGMCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFERILYVDLDLHHGD 183
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
G + F ++KV+T+SLH + P P V ++G G+G Y++N+P+ +G D
Sbjct: 184 GVEDAFSFTSKVMTVSLH----KFSPGFFPGKSDVSDVGLGKGRYYSVNVPIQDGIQDEK 239
Query: 256 YVHAMTELVVPAIQKFEP 273
Y + + E V + K P
Sbjct: 240 Y-YQICESVRTSCPKSRP 256
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 189 (71.6 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 38/100 (38%), Positives = 62/100 (62%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 115 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 173
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
H +G P G + ++G G+G Y +N PL +G D
Sbjct: 174 H----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDD 209
Score = 39 (18.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
HP RI+ ++L + + + A ++ +H+ DYI L
Sbjct: 28 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 225 (84.3 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 78/268 (29%), Positives = 121/268 (45%)
Query: 81 AQIPQLLSFHTPDYINEL----------VEADKAGGKMVC-----DGTVLNPGSWGAALL 125
A + +L FHT DY++ L +A K + + D + G + L
Sbjct: 87 ATVEELSDFHTSDYLDFLQTVVPGDMNDAQASKDFSENIVRFNFGDDCPIFDGLFQYCSL 146
Query: 126 AVGTTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCG 183
G +L A + + + IA + G HHA+ A G+C++N+ LA+ L L
Sbjct: 147 YAGASLDAARKLCNNQADIA---INWSGGLHHAKKAEASGFCYVNDIVLAI-LQLLRIHP 202
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGE----GEGF 239
+V+ IDIDVH+G+G + F+ +++VLT+S H P G +D G G
Sbjct: 203 RVMYIDIDVHHGDGVEQAFWSTDRVLTVSFHKYDKE--NFFPGTGPLDSTGPTHPLNPGA 260
Query: 240 GYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+ +N+PL +G D YV ++V + KF P IVL G DS D G C ++
Sbjct: 261 HHAVNVPLHDGIDDESYVQLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLG--CFNLN- 317
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGY 327
G V + G +L+V GGY
Sbjct: 318 VAAHGACVAYT--KTFGLPMLVVGGGGY 343
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 136 (52.9 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 44/184 (23%), Positives = 88/184 (47%)
Query: 29 DTGKGLFDTG-FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL 87
D+G+ L + P ++ + + + R + S+++ + + A + ++
Sbjct: 9 DSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMA 68
Query: 88 SFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWG----AALLAVGTTLSAMKHVL 138
+FHT Y+ L + + G D P + G AA + G T++A + ++
Sbjct: 69 TFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIG-GATITAAQCLI 127
Query: 139 DGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D+D+H+G+
Sbjct: 128 DGMCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFERILYVDLDLHHGD 183
Query: 197 GTAE 200
GT +
Sbjct: 184 GTGD 187
Score = 130 (50.8 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 207 KVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVP 266
++L + L ++HG G G V ++G G+G Y++N+P+ +G D Y ++
Sbjct: 171 RILYVDLDLHHGD-G-----TGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKE 224
Query: 267 AIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGG 326
Q F P +VL +G D+ A DP +T G +G+ ++ + LI+ GG
Sbjct: 225 VYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKYILQWQLA--TLILGGGG 279
Query: 327 YHVTYSAYCLHATLEGVL 344
Y++ +A C L GV+
Sbjct: 280 YNLANTARCW-TYLTGVI 296
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 202 (76.2 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 44/115 (38%), Positives = 61/115 (53%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +P ++ A LAVG L + V+ G ALVRPPGHH+Q A+G+C NN
Sbjct: 93 DSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNV 152
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPS 223
+A + A L G +++++D DVH+G GT F VL S H H + PS
Sbjct: 153 AIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSWHRYEHQEFWPS 207
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 215 (80.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HH + A G+C++N+ L++ + L G V +D+D+H+G+G F S KV T S+
Sbjct: 201 HHCHKSHAAGFCYVNDVVLSINI-LRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSI 259
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H + +P G++ E YN IP G D + + E+V P I F P
Sbjct: 260 HRYDIGF---YPGTGSLKSSRENT---YN--IPTEKGLNDSSMLWIIKEIVAPLISNFGP 311
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
IV+ G D A D + +T+ GYR+ + + +S ++++ GGY T +A
Sbjct: 312 RAIVIQCGCDGLALDTHKEWNMTIKGYRDS---IDWILSHFSEIPIMLLGGGGYSHTETA 368
Query: 334 YC 335
C
Sbjct: 369 KC 370
Score = 42 (19.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 10/56 (17%), Positives = 26/56 (46%)
Query: 45 EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI-PAQIPQLLSFHTPDYINELV 99
++++ P N R ++ +++ + I PAQ L ++H +++ L+
Sbjct: 61 KIVDLLPSNKGRQSLVLGLIEAYKLIDLCDGTIDIYPAQTKDLTTYHDDEFVKHLM 116
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 215 (80.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HH + A G+C++N+ L++ + L G V +D+D+H+G+G F S KV T S+
Sbjct: 201 HHCHKSHAAGFCYVNDVVLSINI-LRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSI 259
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H + +P G++ E YN IP G D + + E+V P I F P
Sbjct: 260 HRYDIGF---YPGTGSLKSSRENT---YN--IPTEKGLNDSSMLWIIKEIVAPLISNFGP 311
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
IV+ G D A D + +T+ GYR+ + + +S ++++ GGY T +A
Sbjct: 312 RAIVIQCGCDGLALDTHKEWNMTIKGYRDS---IDWILSHFSEIPIMLLGGGGYSHTETA 368
Query: 334 YC 335
C
Sbjct: 369 KC 370
Score = 42 (19.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 10/56 (17%), Positives = 26/56 (46%)
Query: 45 EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI-PAQIPQLLSFHTPDYINELV 99
++++ P N R ++ +++ + I PAQ L ++H +++ L+
Sbjct: 61 KIVDLLPSNKGRQSLVLGLIEAYKLIDLCDGTIDIYPAQTKDLTTYHDDEFVKHLM 116
>UNIPROTKB|E7EPS2 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00465375
ProteinModelPortal:E7EPS2 SMR:E7EPS2 Ensembl:ENST00000426196
ArrayExpress:E7EPS2 Bgee:E7EPS2 Uniprot:E7EPS2
Length = 269
Score = 200 (75.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 49/159 (30%), Positives = 83/159 (52%)
Query: 48 EKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKA 104
+ PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E +
Sbjct: 103 DSFPEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNE 161
Query: 105 GGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
G V D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++
Sbjct: 162 GELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSL 221
Query: 161 ADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGT 198
DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 222 MDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGT 260
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 199 (75.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 52/153 (33%), Positives = 82/153 (53%)
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT + FY+ VL ISLH H G P +G VDE+G G G G+N+N+ G
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLH-RHDD-GNFFPGSGAVDEVGAGSGEGFNVNVAWAGG 196
Query: 251 T----GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE---- 302
GD Y+ A +V+P ++F P+++++ G D++ P + GY
Sbjct: 197 LDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHP-----APLGGYHVSAKC 251
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
G + + L + +GG +++ EGG+ +T A C
Sbjct: 252 FGYMTQQLMN-LAGGAVVLALEGGHDLT--AIC 281
Score = 54 (24.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
+HPE++ RI++I S L+ + G A + +L S H+ ++
Sbjct: 20 RHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV 66
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 207 (77.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 76/303 (25%), Positives = 130/303 (42%)
Query: 44 LEVLEKHPENSDRI--KNIVSILKRGPI-SPYISWHSGIPAQIPQLLSFHTPDYINELVE 100
L V ++P N R+ + IV ++ +H+ I A++ ++ H PDY+ L+E
Sbjct: 15 LPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRLHDPDYVQALLE 74
Query: 101 ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPT 159
+ KM G + L +VG T ++ L A+ G HHA
Sbjct: 75 GTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQALQS----GVAIHLSGGYHHAHAD 130
Query: 160 MADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
G+C N+ +A AL+ KV++ID DVH+G+GTA ++++T+S H +
Sbjct: 131 FGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSFHCDKN 190
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P+ ++D GY N TGD ++ ++V A+ P++I+
Sbjct: 191 F--PARKPASSMD-------VGY------ANQTGDEEFLSTFIQVVEMAVNLHRPDLILY 235
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC-LH 337
G D D G ++ + R + LA + S ++ GGY ++A LH
Sbjct: 236 DAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIG-GGYREDHTALVPLH 294
Query: 338 ATL 340
L
Sbjct: 295 LEL 297
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 207 (77.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 76/303 (25%), Positives = 130/303 (42%)
Query: 44 LEVLEKHPENSDRI--KNIVSILKRGPI-SPYISWHSGIPAQIPQLLSFHTPDYINELVE 100
L V ++P N R+ + IV ++ +H+ I A++ ++ H PDY+ L+E
Sbjct: 15 LPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRLHDPDYVQALLE 74
Query: 101 ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPT 159
+ KM G + L +VG T ++ L A+ G HHA
Sbjct: 75 GTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQALQS----GVAIHLSGGYHHAHAD 130
Query: 160 MADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
G+C N+ +A AL+ KV++ID DVH+G+GTA ++++T+S H +
Sbjct: 131 FGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSFHCDKN 190
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P+ ++D GY N TGD ++ ++V A+ P++I+
Sbjct: 191 F--PARKPASSMD-------VGY------ANQTGDEEFLSTFIQVVEMAVNLHRPDLILY 235
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC-LH 337
G D D G ++ + R + LA + S ++ GGY ++A LH
Sbjct: 236 DAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIG-GGYREDHTALVPLH 294
Query: 338 ATL 340
L
Sbjct: 295 LEL 297
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 213 (80.0 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 67/230 (29%), Positives = 115/230 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ +DID H+G+GT E FY ++ V+T+S
Sbjct: 128 HHAKNSEASGFCYVNDIVLAI-LELLKYLQRVLCMDIDTHHGDGTEEAFYTADWVMTVSF 186
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H + P G + ++G G+G Y +N PL + D A+ + V+ + EP
Sbjct: 187 H--------NFPVTGDLRDIGAGKGKYYAINYPLRDCIDDES-CEAIFKPVMSKVM--EP 235
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ +VL G DS + D G LT+ G++ +G V+S +L+++ GGY + A
Sbjct: 236 SAVVLQCGSDSLSGDWLGSFNLTIKGHKCVG-FVKSF-----NLPMLMLRGGGYTIHNVA 289
Query: 334 YCLHATLEGVLN--LPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
C L+ +P L +D Y+ D + + Q N+ +
Sbjct: 290 RCWTYETAVTLDTEIPNELPYNDYFEYFGPDFKLHISPSNTTNQNTNEYL 339
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 207 (77.9 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 62/227 (27%), Positives = 108/227 (47%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C++N+ LA+ L L +V+ IDID+H+G+G E FY +++V+T+S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAI-LELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 199
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H +G P G + ++G G+G Y +N P+ +G D Y ++ + P
Sbjct: 200 H----KYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPVITKIGEITFP 255
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+ L + SA D + G+ + +V++ LL++ GGY + A
Sbjct: 256 TKVCLEIQPVHSAGDQFWVFVYCVKGHAKCVEVVKTF-----NLPLLMLGGGGYTIRNVA 310
Query: 334 YC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQN 377
C + T + +P L +D Y+ D F + + S QN
Sbjct: 311 RCWTYETAVALDCEIPNELPYNDYFEYFGPD--FKLHISPSNMTNQN 355
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 201 (75.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 47/176 (26%), Positives = 88/176 (50%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA A G+C++N+ L +Q + K+ +D D+H+G+G + F S ++ TIS+
Sbjct: 210 HHAFKQRASGFCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISV 269
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVV-PAIQKFE 272
H+ + P G++ + + + +NIPL +G D Y+ + +V P I++ E
Sbjct: 270 HLYEPGFFPG---TGSLSDSRKDKNV---VNIPLKHGCDDN-YLELIASKIVNPLIERHE 322
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH 328
P +++ G D D LT+ G + RI+ ++ Y + ++ GGY+
Sbjct: 323 PEALIIECGGDGLLGDRFNEWQLTIRG---LSRIIINIMKSYPRAHIFLLGGGGYN 375
Score = 40 (19.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 81 AQIPQLLSFHTPDYINELV 99
A+ LL FH+ YI+ L+
Sbjct: 52 ARKDDLLEFHSKSYIDYLI 70
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 196 (74.1 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 57/182 (31%), Positives = 93/182 (51%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HH + A G+ ++N+ LA+ L L +V+ I+I +G+ E F +++V+T+S
Sbjct: 147 HHVKKDKASGFGYVNDVVLAI-LELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSF 205
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H G + G + + GEG+G Y+LN PL +G D ++ A++ +EP
Sbjct: 206 H----KVGDT----GDISDYGEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEP 257
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+IVL G DS A DP G L++ G+ + + VRS L+I+ GGY + A
Sbjct: 258 EVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSF-----NVPLMILGGGGYTLPNVA 312
Query: 334 YC 335
C
Sbjct: 313 RC 314
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 176 (67.0 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 66/250 (26%), Positives = 103/250 (41%)
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
P + + + P YI++L+ M G + L AVG T+ + L+
Sbjct: 49 PVNPDNVKTVYDPTYIHQLINNQLDSKAMRRIGFPWSQQLIERTLTAVGGTIMTAQLALE 108
Query: 140 GHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNG 197
+GK +L G HHA G+C +N+ LA L N KV++ D DVH G+G
Sbjct: 109 -YGK---SLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDG 164
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
TA+ + V T+S+H G + P V NL+ LP GT D Y+
Sbjct: 165 TAKLASNNQNVFTVSIH---GE--KNFPHRKQVS----------NLDFALPKGTTDSLYL 209
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+ + A F+P+ ++ G D D G ++ G ++V + G
Sbjct: 210 ETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDISTQGVLARDKLVFDYC-KLKGI 268
Query: 318 RLLIVQEGGY 327
+ V GGY
Sbjct: 269 PIAAVIGGGY 278
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 176 (67.0 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 66/250 (26%), Positives = 103/250 (41%)
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
P + + + P YI++L+ M G + L AVG T+ + L+
Sbjct: 49 PVNPDNVKTVYDPTYIHQLINNQLDSKAMRRIGFPWSQQLIERTLTAVGGTIMTAQLALE 108
Query: 140 GHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNG 197
+GK +L G HHA G+C +N+ LA L N KV++ D DVH G+G
Sbjct: 109 -YGK---SLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDG 164
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
TA+ + V T+S+H G + P V NL+ LP GT D Y+
Sbjct: 165 TAKLASNNQNVFTVSIH---GE--KNFPHRKQVS----------NLDFALPKGTTDSLYL 209
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+ + A F+P+ ++ G D D G ++ G ++V + G
Sbjct: 210 ETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDISTQGVLARDKLVFDYC-KLKGI 268
Query: 318 RLLIVQEGGY 327
+ V GGY
Sbjct: 269 PIAAVIGGGY 278
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 167 (63.8 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 64/236 (27%), Positives = 99/236 (41%)
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA+I L H P YI + + + G + + AVG +L A + L+
Sbjct: 51 PAEILALA--HDPAYIERYMSGELSREDQRRLGLPWSEALARRTVRAVGGSLLAAEQALE 108
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGT 198
HG +A L HHA G+C N+ + L SG G+V++ D DVH G+GT
Sbjct: 109 -HG-LACHLAGGT-HHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDGT 165
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
A + +T+SLH P+ D IPLP G GD Y++
Sbjct: 166 ARILQHTADAVTVSLHCEKNF--PARKAQSDWD-------------IPLPMGMGDADYLN 210
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMG-RIVRSLADR 313
+ + + + ++P++++ G D D G LT G E R++R R
Sbjct: 211 VVDDTLNYLLPLYQPDLVLYDAGVDVHQDDALGYLKLTDAGVAERDERVMRHCLGR 266
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 165 (63.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 60/221 (27%), Positives = 91/221 (41%)
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA I L H P YI+ + D + G + + AVG +L + L
Sbjct: 51 PADILALA--HDPSYISRYLNGDLSREDQRRLGLPWSEALARRTVSAVGGSLLTAEQALK 108
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGT 198
HG + + HHA G+C N+ + Q L SG KV++ D DVH G+GT
Sbjct: 109 -HGMACH--LAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGT 165
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
A + +T+SLH P+ D IPLP G GD Y++
Sbjct: 166 ARILADTEDAITVSLHCEKNF--PARKAQSDWD-------------IPLPMGMGDANYLN 210
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+ +L+ + ++P++++ G D D G LT G
Sbjct: 211 VVDDLLNYLLPFYKPDLVLYDAGVDVHKDDALGYLQLTDQG 251
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 137 (53.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 209 LTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
+T+SLH + P P G V ++G G+G Y++N+P+ +G D Y H ++
Sbjct: 1 MTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEV 56
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
F P +VL +G D+ A DP +T G +G+ ++ + +L + GGY
Sbjct: 57 YIAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKYILQWQLATLILGGETGGY 113
Query: 328 HVTYSAYCLHATLEGVL 344
++ +A C L GV+
Sbjct: 114 NLANTARCW-TYLTGVI 129
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 62/255 (24%), Positives = 106/255 (41%)
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAV-GTTLSA 133
+H+ P +++ H DY+ + ++ A + G + L ++ GT+L+A
Sbjct: 44 FHTPTPMTAEEIMQVHHRDYVEQFIDGTLATSALRRIGFPWSEALVERTLHSLAGTSLTA 103
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDV 192
+ G IA L HHA GYC N+ +A + L + K+++ D DV
Sbjct: 104 ALALQTG---IALHLTGGY-HHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDV 159
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
H G+GTA +++ S+H PS Q+ D I L GT
Sbjct: 160 HQGDGTATLSQLHQGIISCSIHCKDNF--PSRKQHSHYD-------------IELVKGTD 204
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y+ + + + I+ +P++I+ G D D G ++ G + V S+A
Sbjct: 205 DSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLSMA- 263
Query: 313 RYSGGRLLIVQEGGY 327
R + + V GGY
Sbjct: 264 RAANIPVAAVIGGGY 278
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 62/255 (24%), Positives = 106/255 (41%)
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAV-GTTLSA 133
+H+ P +++ H DY+ + ++ A + G + L ++ GT+L+A
Sbjct: 44 FHTPTPMTAEEIMQVHHRDYVEQFIDGTLATSALRRIGFPWSEALVERTLHSLAGTSLTA 103
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDV 192
+ G IA L HHA GYC N+ +A + L + K+++ D DV
Sbjct: 104 ALALQTG---IALHLTGGY-HHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDV 159
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
H G+GTA +++ S+H PS Q+ D I L GT
Sbjct: 160 HQGDGTATLSQLHQGIISCSIHCKDNF--PSRKQHSHYD-------------IELVKGTD 204
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y+ + + + I+ +P++I+ G D D G ++ G + V S+A
Sbjct: 205 DSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLSMA- 263
Query: 313 RYSGGRLLIVQEGGY 327
R + + V GGY
Sbjct: 264 RAANIPVAAVIGGGY 278
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 134 (52.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 209 LTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
+T+SLH + P P G V ++G G+G Y++N+P+ +G D Y ++
Sbjct: 1 MTVSLH----KFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEV 56
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
Q F P +VL +G D+ A DP +T G +G+ ++ + LI+ GGY
Sbjct: 57 YQAFNPKAVVLQLGADTIAGDPMCSFNMTPVG---IGKCLKYILQWQLA--TLILGGGGY 111
Query: 328 HVTYSAYCLHATLEGVL 344
++ +A C L GV+
Sbjct: 112 NLANTARCW-TYLTGVI 127
>SGD|S000006037 [details] [associations]
symbol:HOS3 "Trichostatin A-insensitive homodimeric histone
deacetylase (HDAC)" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000083 "regulation of transcription involved in
G1/S phase of mitotic cell cycle" evidence=IGI;IPI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005935 "cellular bud neck"
evidence=IDA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] SGD:S000006037 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0005935 GO:GO:0045944
GO:GO:0006351 EMBL:BK006949 EMBL:U43503 GO:GO:0070932 GO:GO:0000083
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 PIR:S62006
RefSeq:NP_015209.1 ProteinModelPortal:Q02959 DIP:DIP-8047N
IntAct:Q02959 MINT:MINT-2781063 STRING:Q02959 PaxDb:Q02959
PeptideAtlas:Q02959 EnsemblFungi:YPL116W GeneID:855987
KEGG:sce:YPL116W CYGD:YPL116w HOGENOM:HOG000246666 KO:K11484
OMA:AAITMYP OrthoDB:EOG4BZR9V NextBio:980834 Genevestigator:Q02959
GermOnline:YPL116W Uniprot:Q02959
Length = 697
Score = 136 (52.9 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
A+ +RPPGHH G+C LNNA +A++ A ++ VVV+D D+H+G+GT +
Sbjct: 186 AFVAIRPPGHHCHYGTPSGFCLLNNAHVAIEYAYDTYNVTHVVVLDFDLHHGDGTQD 242
Score = 56 (24.8 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDG----YREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
++V+ G D+S F+ Q +++ Y + LA + G++L + EGGY +
Sbjct: 362 LVVISAGFDASEFEQTSMQRHSVNVPTSFYTTFTKDALKLAQMHCHGKVLSLMEGGY--S 419
Query: 331 YSAYC--LHATLEGVLN 345
A C + A L G+ N
Sbjct: 420 DKAICSGVFAHLIGLQN 436
Score = 46 (21.3 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGT-TLSAMK 135
P +L H + EL+E + + G + P +W + + + + T+ A++
Sbjct: 108 PHVLKVHGSSWPAELIELCQMADAKLLKGEIEVPDTWNSGDIYLSSKTIKALQ 160
>CGD|CAL0004270 [details] [associations]
symbol:HOS3 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=IEA] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 142 (55.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGK----IAYALVRPPGHHAQPTMADGYCFLNNA 170
L P + A +GT SA+ + K +A+ ++RPPGHH+ + G+C LNN
Sbjct: 272 LTPKTINAIEGVIGTIESAVDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCLLNNV 331
Query: 171 GLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ ++ A G ++DID+H+G+G+ +
Sbjct: 332 QIGIEYAFEQYGVTHCAILDIDLHHGDGSQD 362
Score = 50 (22.7 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD-PN-GRQCLTMDG--YREMGRIVRSLA 311
Y +T+ P F+P +I + G D+S ++ P R + + Y + V LA
Sbjct: 504 YSQPLTKPTPPP--PFKP-LIAISAGFDASQYENPQMQRHGINVPTSFYSTFTKDVVKLA 560
Query: 312 DRYSGGRLLIVQEGGY 327
++ G++L EGGY
Sbjct: 561 KIHTNGKVLSFLEGGY 576
>UNIPROTKB|Q5AF34 [details] [associations]
symbol:HOS3 "Likely histone deacetylase Hos3p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 142 (55.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGK----IAYALVRPPGHHAQPTMADGYCFLNNA 170
L P + A +GT SA+ + K +A+ ++RPPGHH+ + G+C LNN
Sbjct: 272 LTPKTINAIEGVIGTIESAVDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCLLNNV 331
Query: 171 GLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ ++ A G ++DID+H+G+G+ +
Sbjct: 332 QIGIEYAFEQYGVTHCAILDIDLHHGDGSQD 362
Score = 50 (22.7 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD-PN-GRQCLTMDG--YREMGRIVRSLA 311
Y +T+ P F+P +I + G D+S ++ P R + + Y + V LA
Sbjct: 504 YSQPLTKPTPPP--PFKP-LIAISAGFDASQYENPQMQRHGINVPTSFYSTFTKDVVKLA 560
Query: 312 DRYSGGRLLIVQEGGY 327
++ G++L EGGY
Sbjct: 561 KIHTNGKVLSFLEGGY 576
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 140 (54.3 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 70/292 (23%), Positives = 114/292 (39%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG 105
LEK HP ++ + +++ LK + A LL HT Y+N+L
Sbjct: 30 LEKLHPFDAGKWGKVINFLKEEKLIGDDLIVQAREATDEDLLVVHTRRYLNKL-----KW 84
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHAQ 157
+V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 85 SFVVATITEIPPVLFLPNFLVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCS 144
Query: 158 PTMADGYCFLNNAGLAVQLALNS--GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C + LA++ G K +ID+D H GNG F ++V + +
Sbjct: 145 SDKGGGFCAYADITLAIKFLFERVPGVSKATIIDLDAHQGNGHERDFMNDHRVYIMDAYN 204
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+ +P +G + L GT D Y+ + V A+ + +P++
Sbjct: 205 RY-----IYPGDGFAKR-------AIKRKVELEWGTEDTEYLQKVHTHVEGALNELKPDI 252
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
IV G D DP G ++ G + +V A R G +L+V GGY
Sbjct: 253 IVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFKAA-RSRGIPILMVTSGGY 303
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 209 LTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAI 268
+T+S H +G P G + ++G G+G Y +N PL +G D Y ++ +
Sbjct: 1 MTVSFH----KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVM 56
Query: 269 QKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH 328
+ F+P+ +VL G DS + D G LT+ G+ + V+S +L++ GGY
Sbjct: 57 EMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSF-----NLPMLMLGGGGYT 111
Query: 329 VTYSAYC-LHATLEGV-LNLPLAL-LSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
+ A C + T + +P L +D Y+ D + Q N+ + +K
Sbjct: 112 IRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 170
>UNIPROTKB|G4N4X5 [details] [associations]
symbol:MGG_06043 "Histone deacetylase HOS3" species:242507
"Magnaporthe oryzae 70-15" [GO:0004407 "histone deacetylase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005935 "cellular bud
neck" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0005935 EMBL:CM001233 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11484 RefSeq:XP_003711894.1 EnsemblFungi:MGG_06043T0
GeneID:2683932 KEGG:mgr:MGG_06043 Uniprot:G4N4X5
Length = 1141
Score = 134 (52.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEG 201
K A+ +RPPGHH + G+C++NN + + L+ G +ID D+H+G+G+
Sbjct: 330 KRAFVAIRPPGHHCSASFPSGFCWVNNVHVGIMHGILSHGLTHAAIIDFDLHHGDGSQAI 389
Query: 202 FYRSNKVLTISLHMNHGSWG-PS------HPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
++ N I L N W PS H N E+G+ E N ++ + N G
Sbjct: 390 AWQHN-TRGIGLSTNAAWWKKPSIGYFSLHDINSYPCEMGDEEKVK-NASLCIENAHGQN 447
Query: 255 GY-VHAM 260
+ VH +
Sbjct: 448 IWNVHLL 454
Score = 56 (24.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 32/115 (27%), Positives = 51/115 (44%)
Query: 254 RGYVHAMTELVVPAIQK-FEPNMIVLVVGQDSSAFDPNGRQC----LTMDGYREMGR-IV 307
R ++ A TE A Q I L G D+S ++ G Q + + Y + R +V
Sbjct: 478 REFLRAQTERFRNAGQSNVAKGAIFLSAGFDASEWEGAGMQRHKVNVPTEFYARLTRDVV 537
Query: 308 RSLADRYSG--GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSD-PIAYYP 359
+ A+ + GR++ V EGGY + A C G+L+ L D P+ + P
Sbjct: 538 KIAAEEETSVEGRVISVLEGGY--SDRALC-----SGILSHVSGLAGDDPVDFAP 585
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 133 (51.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 69/292 (23%), Positives = 114/292 (39%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG 105
LEK HP ++ + ++S+LK + A LL HT Y+NEL
Sbjct: 30 LEKLHPFDAGKWGKVISLLKEEKLLSDSMLVEAREASDEDLLVVHTRRYLNEL-----KW 84
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHAQ 157
V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 85 SFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCS 144
Query: 158 PTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C + LA++ + G K ++D+D H GNG F +V + ++
Sbjct: 145 SDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQGNGHERDFMGDKRVYIMDVYN 204
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
H +P G D + + L GT D Y+ + + A+Q+ P++
Sbjct: 205 RH-----IYP--G--DRFAKQ---AIRRKVELEWGTEDDEYLQKVERNLEKALQEHRPDI 252
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+V G D D G ++ G + +V + R +L+V GGY
Sbjct: 253 VVYNAGTDILEGDRLGGLAISPQGVVKRDELVFRIV-RGRQLPILMVTSGGY 303
>UNIPROTKB|E7EW22 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00940139
ProteinModelPortal:E7EW22 SMR:E7EW22 Ensembl:ENST00000436675
ArrayExpress:E7EW22 Bgee:E7EW22 Uniprot:E7EW22
Length = 185
Score = 123 (48.4 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 42/180 (23%), Positives = 85/180 (47%)
Query: 29 DTGKGLFDTG-FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL 87
D+G+ L + P ++ + + + R + S+++ + + A + ++
Sbjct: 9 DSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMA 68
Query: 88 SFHTPDYINELVEADKAGGKMVCDGTVLN-----PGSWG----AALLAVGTTLSAMKHVL 138
+FHT Y+ L + + G D P + G AA + G T++A + ++
Sbjct: 69 TFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIG-GATITAAQCLI 127
Query: 139 DGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
DG K+A + G HHA+ A G+C+LN+A L + L L +++ +D+D+H+G+
Sbjct: 128 DGMCKVA---INWSGGWHHAKKDEASGFCYLNDAVLGI-LRLRRKFERILYVDLDLHHGD 183
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 131 (51.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 75/333 (22%), Positives = 127/333 (38%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG 105
LEK HP ++ + +++ LK + A LL HT Y+NEL
Sbjct: 31 LEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEAREASEEDLLVVHTRRYLNEL-----KW 85
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHAQ 157
+V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 86 SFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCS 145
Query: 158 PTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C + LA++ G + +ID+D H GNG F +V + ++
Sbjct: 146 SDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYN 205
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
H +P + E + L GT D Y+ + V ++Q+ P++
Sbjct: 206 RH-----IYPGDRFAKE-------AIRRKVELEWGTEDEEYLEKVERNVRRSLQEHLPDV 253
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+V G D D G ++ G + +V + R +L+V GGY +
Sbjct: 254 VVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVV-RAHDIPILMVTSGGYQKRTA--- 309
Query: 336 LHATLEGVLNL-PLALLSDPIAYYP-EDEAFPV 366
+ +LNL L L+ Y P + + P+
Sbjct: 310 -RIIADSILNLHDLGLIGPEFPYVPARNSSIPL 341
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 67/319 (21%), Positives = 127/319 (39%)
Query: 34 LFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPD 93
++ + +D F+ + + HP +S + + L + + A LL H+ +
Sbjct: 77 IYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSEN 136
Query: 94 YINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----Y 146
Y+N L K+ V T + P ++ L L + + G K+A +
Sbjct: 137 YLNSL----KSSAT-VARITEVAPVAFFPNFLVQQKVLYPFRKQVGGTILAAKLATERGW 191
Query: 147 ALVRPPG-HHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYR 204
A+ G HH G+C + L + A L +V++ID+D H GNG
Sbjct: 192 AINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNGHETDLGD 251
Query: 205 SNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
N+V + ++ N + + +D+ + + +GT Y+ + E +
Sbjct: 252 DNRVYILDMY-NPEIYPFDYRARRFIDQ-----------KVEVMSGTTTDEYLRKLDEAL 299
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
A + F+P +++ G D DP G ++ DG V A R L+++
Sbjct: 300 EVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFA-REKNIPLVMLTS 358
Query: 325 GGYHVTYSAYCLHATLEGV 343
GGY + SA + ++E +
Sbjct: 359 GGY-MKSSARVIADSIENL 376
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 70/293 (23%), Positives = 112/293 (38%)
Query: 47 LEK-HPENSDRIKNIVSILKRGP-ISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKA 104
LEK HP ++ + ++ LK I+ I + A LL HT Y+N L
Sbjct: 42 LEKLHPFDAGKWGKVIRFLKEEQFITDEIIVLAR-EASEADLLVVHTARYLNRL-----K 95
Query: 105 GGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHA 156
+V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 96 WSLVVATITEIPPLLFLPNFLVQRKVLRPLRTQTGGTIMAGKLAIDRGWAINVGGGFHHC 155
Query: 157 QPTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
G+C + LA++ G +ID+D H GNG F +V + ++
Sbjct: 156 SSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQGNGHERDFLEDRRVYIMDVY 215
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
H +P +G + L GT D Y+ + A+ + P+
Sbjct: 216 NRH-----IYPGDGYAKR-------AIKRKVELDWGTEDSEYLQKVDLHSEGALNEARPD 263
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+I+ G D DP G ++ G + I+ A R G +L+V GGY
Sbjct: 264 IIIYNAGTDILDGDPLGGLAISPQGIIKRDEIIFRAARR-RGIPILMVTSGGY 315
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 123 (48.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 67/292 (22%), Positives = 112/292 (38%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG 105
LEK HP ++ + +++ LK + A LL HT Y+NEL
Sbjct: 31 LEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEAREASEEDLLVVHTRRYLNEL-----KW 85
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHAQ 157
+V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 86 SFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCS 145
Query: 158 PTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C + LA++ G + +ID+D H GNG F +V + ++
Sbjct: 146 SDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYN 205
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
H +P + E + L GT D Y+ + V ++Q+ P++
Sbjct: 206 RH-----IYPGDRFAKE-------AIRRKVELEWGTEDEEYLEKVERNVRRSLQEHLPDV 253
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+V G D D G ++ G + +V + R +L+V GGY
Sbjct: 254 VVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVV-RAHDIPILMVTSGGY 304
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 122 (48.0 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 42/177 (23%), Positives = 79/177 (44%)
Query: 154 HHAQPTMADGYC-FLNNAGLAVQLALNSG--CGKVVVIDIDVHYGNGTAEGFYRSNKVLT 210
HH G+C + + + L V+L +++++D+D H GNG F N V
Sbjct: 158 HHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDF---NNVAA 214
Query: 211 ISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQK 270
+ + + ++ +P++ E + L N T D Y+ + ++ ++ +
Sbjct: 215 VYIFDMYNAF--VYPRDHVAKE-------SIRCAVELRNYTEDGFYLRQLKRCLMQSLAE 265
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
F P+M+V G D DP G ++ +G E R+V S R G ++++ GGY
Sbjct: 266 FRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTF-RALGIPVVMLLSGGY 321
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 68/292 (23%), Positives = 112/292 (38%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG 105
LEK HP ++ + ++S LK + A LL HT Y+NEL
Sbjct: 3 LEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDEDLLVVHTRRYLNEL-----KW 57
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHAQ 157
V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 58 SFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCS 117
Query: 158 PTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C + LA++ G + ++D+D H GNG F +V + ++
Sbjct: 118 SDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMDVYN 177
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
H +P G D + + L GT D Y+ + + A+Q+ P++
Sbjct: 178 RH-----IYP--G--DRFAKQ---AIRRKVELEWGTEDDEYLDKVERNLQKALQEHLPDV 225
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+V G D D G ++ G + +V + R +L+V GGY
Sbjct: 226 VVYNAGTDILEGDRLGGLSISPQGIVKRDELVFRVV-RGRQVPILMVTSGGY 276
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 68/293 (23%), Positives = 114/293 (38%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG 105
LEK HP ++ + +++ LK + A LL HT Y+NEL
Sbjct: 31 LEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNEL-----KW 85
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHAQ 157
V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 86 SFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCS 145
Query: 158 PTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C + LA++ G + +ID+D H GNG F +V + ++
Sbjct: 146 SDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN 205
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
H +P G D + + L GT D Y+ + + ++Q+ P++
Sbjct: 206 RH-----IYP--G--DRFAKQ---AIRRKVELEWGTEDDEYLDKVERNIEKSLQEHLPDV 253
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV-RSLADRYSGGRLLIVQEGGY 327
+V G D D G ++ G + +V R + R+ +L+V GGY
Sbjct: 254 VVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVP--ILMVTSGGY 304
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 67/292 (22%), Positives = 112/292 (38%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG 105
LEK HP ++ + +++ LK + A LL HT Y+NEL
Sbjct: 3 LEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNEL-----KW 57
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHAQ 157
V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 58 SFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCS 117
Query: 158 PTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C + LA++ G + +ID+D H GNG F +V + ++
Sbjct: 118 SDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN 177
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
H +P G D + + L GT D Y+ + + ++Q+ P++
Sbjct: 178 RH-----IYP--G--DRFAKQ---AIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDV 225
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+V G D D G ++ G + +V + R +L+V GGY
Sbjct: 226 VVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMV-RGRRVPILMVTSGGY 276
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 67/292 (22%), Positives = 112/292 (38%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG 105
LEK HP ++ + +++ LK + A LL HT Y+NEL
Sbjct: 31 LEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNEL-----KW 85
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH---GKIA----YALVRPPG-HHAQ 157
V T + P + L L ++ G GK+A +A+ G HH
Sbjct: 86 SFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCS 145
Query: 158 PTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C + LA++ G + +ID+D H GNG F +V + ++
Sbjct: 146 SDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN 205
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
H +P G D + + L GT D Y+ + + ++Q+ P++
Sbjct: 206 RH-----IYP--G--DRFAKQ---AIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDV 253
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+V G D D G ++ G + +V + R +L+V GGY
Sbjct: 254 VVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMV-RGRRVPILMVTSGGY 304
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 106 (42.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 40/176 (22%), Positives = 69/176 (39%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTI 211
HH G+C + LA++ G + +ID+D H GNG F +V +
Sbjct: 141 HHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIM 200
Query: 212 SLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKF 271
++ H +P G D + + L T D Y+ + + A+Q+
Sbjct: 201 DVYNRH-----IYP--G--DRFAKQ---AIRRKVELEWATEDDEYLTKVERNLEKALQEH 248
Query: 272 EPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
P+++V G D D G ++ G + +V + R +L+V GGY
Sbjct: 249 RPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMV-RSLQVPILMVTSGGY 303
Score = 53 (23.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 47 LEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
LEK HP ++ + ++S LK + A LL HT Y+NEL
Sbjct: 30 LEKLHPFDAGKWGKVISFLKEEKLLTDSMLVEAREASDEDLLVVHTRRYLNEL 82
>ASPGD|ASPL0000069638 [details] [associations]
symbol:hosB species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001304 EMBL:AACD01000117 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K11484
OrthoDB:EOG4BZR9V RefSeq:XP_664623.1 ProteinModelPortal:Q5AXG1
EnsemblFungi:CADANIAT00000457 GeneID:2870089 KEGG:ani:AN7019.2
HOGENOM:HOG000170608 OMA:DLYLCSE Uniprot:Q5AXG1
Length = 1125
Score = 124 (48.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 126 AVGTTLSAMKHVLD-GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCG 183
A+G + V G K A+ +RPPGHH G+C++NN + + A +
Sbjct: 338 ALGGVCEGIDAVFSPGPTKRAFVCIRPPGHHCSSGNPSGFCWINNVHVGISYAAMTHDLT 397
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNK 207
++D D+H+G+G+ + + NK
Sbjct: 398 HAAILDFDLHHGDGSQDIAWEQNK 421
Score = 41 (19.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 276 IVLVVGQDSSAFDPNGRQC----LTMDGY-REMGRIVRSLADRYSG--GRLLIVQEGGY 327
I + G D+S ++ G Q + + Y R +VR + G GR++ V EGGY
Sbjct: 527 IFISAGFDASEWEGMGMQRHKVNVPTEFYARFTADVVRMAEEEGLGVDGRIVSVLEGGY 585
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.140 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 386 373 0.00087 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 208
No. of states in DFA: 612 (65 KB)
Total size of DFA: 255 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.07u 0.12s 30.19t Elapsed: 00:00:01
Total cpu time: 30.12u 0.12s 30.24t Elapsed: 00:00:01
Start: Fri May 10 22:30:35 2013 End: Fri May 10 22:30:36 2013
WARNINGS ISSUED: 1