BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048339
(386 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356543630|ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isoform 1 [Glycine max]
Length = 381
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/380 (79%), Positives = 341/380 (89%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
MA + +E S + G I+VFW +GML HDTG G+FDTG DPGFLEVLEKHPENSDR+KN+
Sbjct: 1 MADAGAEGASSSTVGQIDVFWHEGMLKHDTGNGVFDTGMDPGFLEVLEKHPENSDRVKNL 60
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSW 120
VSILKRGPISPYISWH G PA+IP+L SFHTP+YINELVE DK GGK +C GT LNPGSW
Sbjct: 61 VSILKRGPISPYISWHLGTPAKIPELFSFHTPEYINELVEVDKEGGKQLCGGTFLNPGSW 120
Query: 121 GAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS 180
AALLA GTTLSAMKH+L+G GK++YALVRPPGHHAQP++ADGYCFLNNAGLAVQLAL+S
Sbjct: 121 DAALLAAGTTLSAMKHLLNGDGKVSYALVRPPGHHAQPSLADGYCFLNNAGLAVQLALDS 180
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG 240
GC KV VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ+G+VDELGEGEG+G
Sbjct: 181 GCKKVAVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQSGSVDELGEGEGYG 240
Query: 241 YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY 300
+NLNIPLPNGTGD+GYVHA ELVVP+IQKF P+MIVLV+GQDS+AFDPNGRQCLTM+GY
Sbjct: 241 FNLNIPLPNGTGDKGYVHAFNELVVPSIQKFGPDMIVLVLGQDSNAFDPNGRQCLTMEGY 300
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE 360
RE+GRIV LA R+S GRLLIVQEGGYHVTYSAYCLHATLEG+LNLP+ LL+DPIA+Y +
Sbjct: 301 REIGRIVHLLAKRHSAGRLLIVQEGGYHVTYSAYCLHATLEGILNLPMPLLADPIAFYLD 360
Query: 361 DEAFPVKVIESIKQYQNDVI 380
DE F V+VIE+IK YQ D +
Sbjct: 361 DETFSVQVIEAIKNYQKDKV 380
>gi|357453211|ref|XP_003596882.1| Histone deacetylase [Medicago truncatula]
gi|87240922|gb|ABD32780.1| Histone deacetylase superfamily [Medicago truncatula]
gi|355485930|gb|AES67133.1| Histone deacetylase [Medicago truncatula]
Length = 386
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 298/384 (77%), Positives = 336/384 (87%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
MA + ++ I VFW +GML HDTG G+FDTG DPGFL++LEKHPENSDR+KN+
Sbjct: 1 MATNRDAAAESSSVNKIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNM 60
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSW 120
VSILKRGPISPY+SWH G A IP+LLSFHTP+YINELV+ADK G K++C GT LNPGSW
Sbjct: 61 VSILKRGPISPYVSWHLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSW 120
Query: 121 GAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS 180
AALLA GTTLS+MKH+LDGHGK+AYALVRPPGHHAQP+ ADGYCFLNNAGLAVQLAL+S
Sbjct: 121 DAALLAAGTTLSSMKHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDS 180
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG 240
GC KV VIDIDVHYGNGTAEGFY SNKVLT+SLHMNHGSWGPSHPQ+G++DELG+GEG+G
Sbjct: 181 GCKKVAVIDIDVHYGNGTAEGFYSSNKVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYG 240
Query: 241 YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY 300
YNLNIPLPNGTGD GYV+A ELVVP+I KFEP+MIVLVVGQDSSAFDPNGRQCLTM+GY
Sbjct: 241 YNLNIPLPNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLTMEGY 300
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE 360
RE+GRIV LA R+S GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL LL DP+AYYPE
Sbjct: 301 REIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVAYYPE 360
Query: 361 DEAFPVKVIESIKQYQNDVIPFLK 384
D+ F VKVIE+++ Y D +P K
Sbjct: 361 DKTFSVKVIEAVQNYVTDKMPLWK 384
>gi|217072658|gb|ACJ84689.1| unknown [Medicago truncatula]
gi|388519583|gb|AFK47853.1| unknown [Medicago truncatula]
Length = 386
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/384 (77%), Positives = 336/384 (87%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
MA + ++ I VFW +GML HDTG G+FDTG DPGFL++LEKHPENSDR+KN+
Sbjct: 1 MATNRDAAAESSSVNKIEVFWHEGMLKHDTGNGVFDTGIDPGFLDILEKHPENSDRVKNM 60
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSW 120
VSILKRGPISPY+SWH G A IP+LLSFHTP+YINELV+ADK G K++C GT LNPGSW
Sbjct: 61 VSILKRGPISPYVSWHLGRHALIPELLSFHTPEYINELVKADKKGRKVLCAGTFLNPGSW 120
Query: 121 GAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS 180
AALLA GTTLS+MKH+LDGHGK+AYALVRPPGHHAQP+ ADGYCFLNNAGLAVQLAL+S
Sbjct: 121 DAALLAAGTTLSSMKHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDS 180
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG 240
GC KV VIDIDVHYGNGTAEGFY SN+VLT+SLHMNHGSWGPSHPQ+G++DELG+GEG+G
Sbjct: 181 GCKKVAVIDIDVHYGNGTAEGFYSSNEVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYG 240
Query: 241 YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY 300
YNLNIPLPNGTGD GYV+A ELVVP+I KFEP+MIVLVVGQDSSAFDPNGRQCLTM+GY
Sbjct: 241 YNLNIPLPNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLTMEGY 300
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE 360
RE+GRIV LA R+S GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL LL DP+AYYPE
Sbjct: 301 REIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVAYYPE 360
Query: 361 DEAFPVKVIESIKQYQNDVIPFLK 384
D+ F VKVIE+++ Y D +P K
Sbjct: 361 DKTFSVKVIEAVQNYVTDKMPLWK 384
>gi|255565771|ref|XP_002523875.1| Histone deacetylase, putative [Ricinus communis]
gi|223536963|gb|EEF38601.1| Histone deacetylase, putative [Ricinus communis]
Length = 382
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 290/372 (77%), Positives = 335/372 (90%)
Query: 15 GIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYIS 74
G I+VFW + ML HD G+G+FDTG +PGFL+VLEKHPEN+DRIKNIVSILKRGPISPYIS
Sbjct: 11 GRIDVFWHEDMLKHDAGQGMFDTGINPGFLDVLEKHPENADRIKNIVSILKRGPISPYIS 70
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
WH G PAQ+P+LLSFHT DYINELVEAD+ GGK++C T LNPGSW A LLA GTTLSAM
Sbjct: 71 WHLGRPAQLPELLSFHTSDYINELVEADREGGKIICSSTFLNPGSWDACLLAAGTTLSAM 130
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHY 194
+H+LDGHGK+AYALVRPPGHHAQPT ADGYCFLNNAGLAVQLAL+SG KV VID+DVHY
Sbjct: 131 QHLLDGHGKLAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDSGYRKVAVIDMDVHY 190
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGTAEGFY S++VLTISLHMNHGSWGP+HPQNG++DELG+GEGFG+NLNIPLPNGTG++
Sbjct: 191 GNGTAEGFYHSDRVLTISLHMNHGSWGPTHPQNGSIDELGKGEGFGFNLNIPLPNGTGNK 250
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY HAMTELV+PA+ KFEP+M+V+VVGQDSS DPNGRQCLTMDGYRE+GR + +LA+R+
Sbjct: 251 GYDHAMTELVIPAVNKFEPDMLVMVVGQDSSTLDPNGRQCLTMDGYREIGRKLHALANRH 310
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
SGGRLLIVQEGGYH+TYSAYCLHATLEGVLNLP+ LLSDPI YPEDEA + I SI++
Sbjct: 311 SGGRLLIVQEGGYHITYSAYCLHATLEGVLNLPMPLLSDPIDCYPEDEALAFEAIGSIRK 370
Query: 375 YQNDVIPFLKGS 386
+ D++PFLKG+
Sbjct: 371 HYKDIVPFLKGA 382
>gi|225464988|ref|XP_002277237.1| PREDICTED: histone deacetylase 8 [Vitis vinifera]
Length = 379
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/371 (82%), Positives = 334/371 (90%)
Query: 15 GIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYIS 74
G INVFW +GML HDTG G+FDTG DPGFL+VLEKHPENS+R++N+VSILKRGPISPYIS
Sbjct: 8 GGINVFWHEGMLKHDTGIGVFDTGMDPGFLDVLEKHPENSERLRNMVSILKRGPISPYIS 67
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
WHSG PA I LLSFHTP+YINELV+AD+ GGK +C GT LNPGSW AALLA GT LSAM
Sbjct: 68 WHSGTPALISHLLSFHTPEYINELVQADRDGGKELCSGTFLNPGSWDAALLAAGTALSAM 127
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHY 194
KH+LDGHGKIAYALVRPPGHHAQP+ ADGYCFLNNAGLAVQLALNSGC KV VIDIDVHY
Sbjct: 128 KHILDGHGKIAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALNSGCAKVAVIDIDVHY 187
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGTAEGFY S+KVLTISLHMNHGSWGPSHPQ+G+VDE+G GEGFGYNLNIPLPNGTGDR
Sbjct: 188 GNGTAEGFYHSDKVLTISLHMNHGSWGPSHPQSGSVDEIGVGEGFGYNLNIPLPNGTGDR 247
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY +AM +LVVPAIQK+EP M+VLVVGQDSSAFDPNGRQCLTM+GYRE+G+IVR LAD+Y
Sbjct: 248 GYAYAMNQLVVPAIQKYEPEMMVLVVGQDSSAFDPNGRQCLTMEGYREIGQIVRKLADKY 307
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
S G LLIVQEGGY VTYSAYCLHATLEGVLNLP LLSDPIAYYPEDE KVI++IK+
Sbjct: 308 SDGHLLIVQEGGYQVTYSAYCLHATLEGVLNLPSPLLSDPIAYYPEDELMTTKVIDAIKK 367
Query: 375 YQNDVIPFLKG 385
+QN PFLKG
Sbjct: 368 FQNSTAPFLKG 378
>gi|147865290|emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]
Length = 379
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 304/371 (81%), Positives = 333/371 (89%)
Query: 15 GIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYIS 74
G INVFW +GML HDTG G+FDTG DPGFL+VLEKHPENS+R++N+VSILKRGPISPYIS
Sbjct: 8 GGINVFWHEGMLKHDTGNGVFDTGMDPGFLDVLEKHPENSERLRNMVSILKRGPISPYIS 67
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
WHSG PA I LLSFHTP+YINELV+AD+ GGK +C GT LNPGSW AALLA GT LSAM
Sbjct: 68 WHSGTPALISHLLSFHTPEYINELVQADRDGGKELCSGTFLNPGSWDAALLAAGTALSAM 127
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHY 194
KH+LDGHGKIAYALVRPPGHHAQP ADGYCFLNNAGLAVQLALNSGC KV V DIDVHY
Sbjct: 128 KHILDGHGKIAYALVRPPGHHAQPGQADGYCFLNNAGLAVQLALNSGCAKVAVXDIDVHY 187
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGTAEGFY S+KVLTISLHMNHGSWGPSHPQ+G+VDE+G GEGFGYNLNIPLPNGTGDR
Sbjct: 188 GNGTAEGFYHSDKVLTISLHMNHGSWGPSHPQSGSVDEIGVGEGFGYNLNIPLPNGTGDR 247
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY +AM +LVVPAIQK+EP M+VLVVGQDSSAFDPNGRQCLTM+GYRE+G+IVR LAD+Y
Sbjct: 248 GYAYAMNQLVVPAIQKYEPEMMVLVVGQDSSAFDPNGRQCLTMEGYREIGQIVRKLADKY 307
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
S GRLLIVQEGGY +TYSAYCLHATLEGVLNLP LLSDPIAYYPEDE KVI++IK+
Sbjct: 308 SDGRLLIVQEGGYQLTYSAYCLHATLEGVLNLPSPLLSDPIAYYPEDELMTTKVIDAIKK 367
Query: 375 YQNDVIPFLKG 385
+QN PFLKG
Sbjct: 368 FQNSTAPFLKG 378
>gi|224104559|ref|XP_002313479.1| histone deacetylase [Populus trichocarpa]
gi|222849887|gb|EEE87434.1| histone deacetylase [Populus trichocarpa]
Length = 379
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 299/371 (80%), Positives = 339/371 (91%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
II+VFW +GMLNH+TGKG+FD+G DPGFL+VLEKHPENSDRIKN+VSIL++GPISPYISW
Sbjct: 9 IIDVFWHEGMLNHETGKGVFDSGTDPGFLDVLEKHPENSDRIKNMVSILQKGPISPYISW 68
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
G PAQ+P+LLSFH P+YI+ELVEA K GGKM+C GT LNPGSW AALLA GTTLSAMK
Sbjct: 69 QHGRPAQVPELLSFHAPEYIDELVEAGKQGGKMICAGTFLNPGSWDAALLAAGTTLSAMK 128
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYG 195
H+LDGHGK+AYALVRPPGHHAQP ADGYCFLNNAGLAVQLAL+SGC KV VIDIDVHYG
Sbjct: 129 HILDGHGKLAYALVRPPGHHAQPKQADGYCFLNNAGLAVQLALDSGCKKVTVIDIDVHYG 188
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGTAEGFYR++KVLT+SLHMNHGSWGPSHPQNG+V ELGEGEGFGYNLNIPLPNGTGDRG
Sbjct: 189 NGTAEGFYRTDKVLTVSLHMNHGSWGPSHPQNGSVGELGEGEGFGYNLNIPLPNGTGDRG 248
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y +AM +LVVPA+ KFEP+MIV VVGQDSSAFDPNGRQCLTMDGYRE+GRIV SLA+++S
Sbjct: 249 YGYAMKKLVVPAVHKFEPDMIVFVVGQDSSAFDPNGRQCLTMDGYREIGRIVHSLANKHS 308
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
GG++LIVQEGGYH+TYSAYCLHA LEGVL+LP LL DPIAYYPEDEAF VK +E+ + Y
Sbjct: 309 GGKILIVQEGGYHITYSAYCLHAILEGVLDLPQPLLCDPIAYYPEDEAFAVKFVEATRNY 368
Query: 376 QNDVIPFLKGS 386
+++PFLKG+
Sbjct: 369 HKEMVPFLKGT 379
>gi|449492801|ref|XP_004159105.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 8-like [Cucumis
sativus]
Length = 375
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/384 (76%), Positives = 333/384 (86%), Gaps = 10/384 (2%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
MA SPS I+VFW +GMLNHDTG G+FDTG DPGFL+VL+KHPENSDRIKN+
Sbjct: 1 MAGSPS----------IHVFWHEGMLNHDTGYGVFDTGEDPGFLDVLDKHPENSDRIKNM 50
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSW 120
VSILKRGP+SP+I+WHSG A + +L SFH DY+NELVEADK GGK++C GT LNPGSW
Sbjct: 51 VSILKRGPLSPFITWHSGRHALLSELHSFHHQDYVNELVEADKXGGKVMCCGTFLNPGSW 110
Query: 121 GAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS 180
+LLA GTTLSAMKHVL+G G IAYALVRPPGHHAQPT ADGYCFLNNAGLAV LALNS
Sbjct: 111 DVSLLAAGTTLSAMKHVLEGQGNIAYALVRPPGHHAQPTRADGYCFLNNAGLAVHLALNS 170
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG 240
GC KV V+DIDVH+GNGTAEGFY SNKVLTISLHM+HGSWGPSHPQ+G++DELGEG+G+G
Sbjct: 171 GCEKVAVVDIDVHHGNGTAEGFYMSNKVLTISLHMDHGSWGPSHPQSGSIDELGEGQGYG 230
Query: 241 YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY 300
YNLNIPLPNGTG+RGY +AM LVVPAIQKFEP+MIVLVVGQDSSAFDPNGRQCLTMDGY
Sbjct: 231 YNLNIPLPNGTGNRGYEYAMKTLVVPAIQKFEPHMIVLVVGQDSSAFDPNGRQCLTMDGY 290
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE 360
++G+I+ LA +YS G LLIVQEGGYHVTYSAYCLHATLEG+LNL L+SDP+ YPE
Sbjct: 291 WKIGQIISELAKKYSSGSLLIVQEGGYHVTYSAYCLHATLEGILNLSPPLISDPLDSYPE 350
Query: 361 DEAFPVKVIESIKQYQNDVIPFLK 384
DEAF VKVI+ IK+Y+++ +PFLK
Sbjct: 351 DEAFSVKVIDFIKKYEDENVPFLK 374
>gi|449443482|ref|XP_004139506.1| PREDICTED: histone deacetylase 8-like [Cucumis sativus]
Length = 375
Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/384 (76%), Positives = 333/384 (86%), Gaps = 10/384 (2%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
MA SPS I+VFW +GMLNHDTG G+FDTG DPGFL+VL+KHPENSDRIKN+
Sbjct: 1 MAGSPS----------IHVFWHEGMLNHDTGYGVFDTGEDPGFLDVLDKHPENSDRIKNM 50
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSW 120
VSILKRGP+SP+I+WHSG A + +L SFH DY+NELVEADK GGK++C GT LNPGSW
Sbjct: 51 VSILKRGPLSPFITWHSGRHALLSELHSFHHQDYVNELVEADKNGGKVMCCGTFLNPGSW 110
Query: 121 GAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS 180
+LLA GTTLSAMKHVL+G G IAYALVRPPGHHAQPT ADGYCFLNNAGLAV LALNS
Sbjct: 111 DVSLLAAGTTLSAMKHVLEGQGNIAYALVRPPGHHAQPTRADGYCFLNNAGLAVHLALNS 170
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG 240
GC KV V+DIDVH+GNGTAEGFY SNKVLTISLHM+HGSWGPSHPQ+G++DELGEG+G+G
Sbjct: 171 GCEKVAVVDIDVHHGNGTAEGFYMSNKVLTISLHMDHGSWGPSHPQSGSIDELGEGQGYG 230
Query: 241 YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY 300
YNLNIPLPNGTG+RGY +AM LVVPAIQKFEP+MIVLVVGQDSSAFDPNGRQCLTMDGY
Sbjct: 231 YNLNIPLPNGTGNRGYEYAMKTLVVPAIQKFEPHMIVLVVGQDSSAFDPNGRQCLTMDGY 290
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE 360
++G+I+ LA +YS G LLIVQEGGYHVTYSAYCLHATLEG+LNL L+SDP+ YPE
Sbjct: 291 WKIGQIISELAKKYSSGSLLIVQEGGYHVTYSAYCLHATLEGILNLSPPLISDPLDSYPE 350
Query: 361 DEAFPVKVIESIKQYQNDVIPFLK 384
DEAF VKVI+ IK+Y+++ +PFLK
Sbjct: 351 DEAFSVKVIDFIKKYEDENVPFLK 374
>gi|296084935|emb|CBI28344.3| unnamed protein product [Vitis vinifera]
Length = 348
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 287/347 (82%), Positives = 314/347 (90%)
Query: 39 FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
DPGFL+VLEKHPENS+R++N+VSILKRGPISPYISWHSG PA I LLSFHTP+YINEL
Sbjct: 1 MDPGFLDVLEKHPENSERLRNMVSILKRGPISPYISWHSGTPALISHLLSFHTPEYINEL 60
Query: 99 VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
V+AD+ GGK +C GT LNPGSW AALLA GT LSAMKH+LDGHGKIAYALVRPPGHHAQP
Sbjct: 61 VQADRDGGKELCSGTFLNPGSWDAALLAAGTALSAMKHILDGHGKIAYALVRPPGHHAQP 120
Query: 159 TMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
+ ADGYCFLNNAGLAVQLALNSGC KV VIDIDVHYGNGTAEGFY S+KVLTISLHMNHG
Sbjct: 121 SQADGYCFLNNAGLAVQLALNSGCAKVAVIDIDVHYGNGTAEGFYHSDKVLTISLHMNHG 180
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
SWGPSHPQ+G+VDE+G GEGFGYNLNIPLPNGTGDRGY +AM +LVVPAIQK+EP M+VL
Sbjct: 181 SWGPSHPQSGSVDEIGVGEGFGYNLNIPLPNGTGDRGYAYAMNQLVVPAIQKYEPEMMVL 240
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
VVGQDSSAFDPNGRQCLTM+GYRE+G+IVR LAD+YS G LLIVQEGGY VTYSAYCLHA
Sbjct: 241 VVGQDSSAFDPNGRQCLTMEGYREIGQIVRKLADKYSDGHLLIVQEGGYQVTYSAYCLHA 300
Query: 339 TLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKG 385
TLEGVLNLP LLSDPIAYYPEDE KVI++IK++QN PFLKG
Sbjct: 301 TLEGVLNLPSPLLSDPIAYYPEDELMTTKVIDAIKKFQNSTAPFLKG 347
>gi|357133495|ref|XP_003568360.1| PREDICTED: histone deacetylase 8-like [Brachypodium distachyon]
Length = 388
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 264/368 (71%), Positives = 322/368 (87%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ VFW +GML HD G+G+FD+G DPGFLEVL++HPEN+DR++N+VSIL+RGPI+P++SWH
Sbjct: 19 VAVFWHEGMLAHDAGRGVFDSGRDPGFLEVLDQHPENADRVRNMVSILRRGPIAPFLSWH 78
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
SG PA +LLSFH+ +YI ELV+A+ G K C+GT LNPGSWGAALLA GTTLSA++H
Sbjct: 79 SGSPAHASELLSFHSSEYIEELVQANANGPKKFCEGTFLNPGSWGAALLAAGTTLSAVRH 138
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+LDGHGK+AYALVRPPGHHAQP ADGYCFLNNAGLAVQLAL+SG KV V+DIDVHYGN
Sbjct: 139 ILDGHGKLAYALVRPPGHHAQPDHADGYCFLNNAGLAVQLALDSGRTKVAVVDIDVHYGN 198
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GTAEGFYR++ VLTISLHMNHGSWGPSHPQNG+ DE+G+G G GYNLNIPLPNG+GD GY
Sbjct: 199 GTAEGFYRTDSVLTISLHMNHGSWGPSHPQNGSTDEIGQGRGLGYNLNIPLPNGSGDAGY 258
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+AM ELV PAI+KF+P ++V V+GQDSSAFDPNGRQCLTMDGYR++G+++R++A+R+S
Sbjct: 259 EYAMNELVAPAIEKFQPQLLVFVIGQDSSAFDPNGRQCLTMDGYRKIGQVMRTMANRHSD 318
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
G++LIVQEGGYH++YSAYCLHATLEGVL+L LL DPIAYYPEDE + KV++ IK+
Sbjct: 319 GQILIVQEGGYHISYSAYCLHATLEGVLSLQAPLLDDPIAYYPEDEEYTRKVVDIIKKSW 378
Query: 377 NDVIPFLK 384
+ IPFLK
Sbjct: 379 KESIPFLK 386
>gi|115464135|ref|NP_001055667.1| Os05g0440100 [Oryza sativa Japonica Group]
gi|53749227|gb|AAU90087.1| unknown protein [Oryza sativa Japonica Group]
gi|113579218|dbj|BAF17581.1| Os05g0440100 [Oryza sativa Japonica Group]
gi|125552494|gb|EAY98203.1| hypothetical protein OsI_20116 [Oryza sativa Indica Group]
gi|215706432|dbj|BAG93288.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215734997|dbj|BAG95719.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631736|gb|EEE63868.1| hypothetical protein OsJ_18692 [Oryza sativa Japonica Group]
Length = 392
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 264/368 (71%), Positives = 319/368 (86%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ VFW +GM+ HD G+G+FD+G DPGFL+VL++HPEN+DR++N+VSIL+RGPI+ +ISWH
Sbjct: 23 LAVFWHEGMVAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIARFISWH 82
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
SG PA +LLSFH+ +YI ELV+A+ G K +C+GT LNPGSWGAALLA GTTLSAMKH
Sbjct: 83 SGRPAHAAELLSFHSAEYIEELVQANAVGAKKLCEGTFLNPGSWGAALLAAGTTLSAMKH 142
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+LDGH KIAYALVRPPGHHAQP ADGYCFLNNAGLAV+LAL+SG KV V+DIDVHYGN
Sbjct: 143 ILDGHAKIAYALVRPPGHHAQPDRADGYCFLNNAGLAVKLALDSGRRKVAVVDIDVHYGN 202
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GTAEGFY ++ VLTISLHM HGSWGPSHPQ+G+VDE+GEG G GYNLNIPLPNG+GD GY
Sbjct: 203 GTAEGFYHTDSVLTISLHMKHGSWGPSHPQSGSVDEIGEGRGLGYNLNIPLPNGSGDAGY 262
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+AM ELVVPAI+KF P ++V VVGQDSS FDPNGRQCLTMDGYR++G+I+R +AD++S
Sbjct: 263 EYAMNELVVPAIEKFRPELLVFVVGQDSSTFDPNGRQCLTMDGYRKIGQIMRGMADQHSN 322
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
G++LIVQEGGYH++YSAYCLHATLEGVLNL LL DPIAYYPEDE + +KV++ +K+
Sbjct: 323 GQILIVQEGGYHISYSAYCLHATLEGVLNLQAPLLDDPIAYYPEDEKYTMKVVDIMKKCW 382
Query: 377 NDVIPFLK 384
+ IPFLK
Sbjct: 383 KESIPFLK 390
>gi|242090687|ref|XP_002441176.1| hypothetical protein SORBIDRAFT_09g021720 [Sorghum bicolor]
gi|241946461|gb|EES19606.1| hypothetical protein SORBIDRAFT_09g021720 [Sorghum bicolor]
Length = 390
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 260/368 (70%), Positives = 321/368 (87%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ VFW +GML HD G+G+FD+G DPGFL+VL++HPEN+DR++N+VSIL+RGPI+ ++SWH
Sbjct: 21 LAVFWHEGMLAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIAHFLSWH 80
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
SG PA +L SFH+ +YI ELV+A+ G K +C+GT LNPGSWGA LLA GTTLSA+KH
Sbjct: 81 SGRPAHASELRSFHSSEYIEELVQANATGAKKLCEGTFLNPGSWGAVLLAAGTTLSAVKH 140
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+LDGHG +AYALVRPPGHHAQP ADGYCFLNNAGLAVQLAL+SG KV V+DIDVHYGN
Sbjct: 141 ILDGHGNLAYALVRPPGHHAQPGHADGYCFLNNAGLAVQLALDSGRAKVAVVDIDVHYGN 200
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GTAEGFYR++ VLT+SLHM HGSWGPSHPQ+G+VDE+GEG+G GYNLNIPLPNG+GD GY
Sbjct: 201 GTAEGFYRTDNVLTMSLHMRHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAGY 260
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+AM ELVVPAI KF+P ++VLV+GQDSSAFDPNGRQCLTM+GYR++G+I+RSLA+R+S
Sbjct: 261 EYAMNELVVPAIDKFQPQLLVLVIGQDSSAFDPNGRQCLTMEGYRKIGQIMRSLANRHSN 320
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
G++L+VQEGGYH+TYSAYCLHATLEGVL+L LL DPIAYYPEDE + +KV++ ++
Sbjct: 321 GQILVVQEGGYHITYSAYCLHATLEGVLDLEAPLLDDPIAYYPEDEEYTMKVVDMVRSCW 380
Query: 377 NDVIPFLK 384
+ +PFLK
Sbjct: 381 KESVPFLK 388
>gi|413949140|gb|AFW81789.1| hypothetical protein ZEAMMB73_628415 [Zea mays]
Length = 391
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 260/369 (70%), Positives = 319/369 (86%), Gaps = 1/369 (0%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ VFWD+GML HD G+G+FD+G DPGFL+VL++HPEN+DR++N+VSIL+RGPI+ ++SWH
Sbjct: 21 LAVFWDEGMLAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIAHFLSWH 80
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMK 135
SG PA +LLSFH+ +YI ELV+ + G K +C+GT LNPGSWGAALLA GTTLS+ K
Sbjct: 81 SGRPAHASELLSFHSSEYIEELVQTNATGAKKKLCEGTFLNPGSWGAALLAAGTTLSSAK 140
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYG 195
H+LDG G +AYALVRPPGHHAQP ADGYCFLNNAGLAVQLAL+SG KV V+DIDVHYG
Sbjct: 141 HILDGQGNLAYALVRPPGHHAQPDHADGYCFLNNAGLAVQLALDSGRAKVAVVDIDVHYG 200
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGTAEGFYR++ VLT+SLHM HGSWGPSHPQ+G+VDE+GEG+G GYNLNIPLPNG+GD G
Sbjct: 201 NGTAEGFYRTDTVLTMSLHMMHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAG 260
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y +AM ELVVP+I KF+P ++ LVVGQDSSAFDPNGRQCLTM+GYR++G+I+R LADR+
Sbjct: 261 YEYAMNELVVPSIDKFQPQLLFLVVGQDSSAFDPNGRQCLTMEGYRKIGQIMRRLADRHC 320
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
G++L+VQEGGYH+TYSAYCLHATLEGVL+L LL DPIAYYPED+ + +KV++ IK Y
Sbjct: 321 NGQILVVQEGGYHITYSAYCLHATLEGVLDLEAPLLDDPIAYYPEDDKYTMKVVDMIKSY 380
Query: 376 QNDVIPFLK 384
+ +PFLK
Sbjct: 381 WKESVPFLK 389
>gi|18390898|ref|NP_563817.1| histone deacetylase 8 [Arabidopsis thaliana]
gi|75250015|sp|Q94EJ2.1|HDA8_ARATH RecName: Full=Histone deacetylase 8
gi|15294162|gb|AAK95258.1|AF410272_1 At1g08460/T27G7_7 [Arabidopsis thaliana]
gi|20453297|gb|AAM19887.1| At1g08460/T27G7_7 [Arabidopsis thaliana]
gi|21360988|gb|AAM49769.1| HDA8 [Arabidopsis thaliana]
gi|332190173|gb|AEE28294.1| histone deacetylase 8 [Arabidopsis thaliana]
Length = 377
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 261/372 (70%), Positives = 321/372 (86%), Gaps = 2/372 (0%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
++VFW +GML HD +G+FDTG+DPGFL+VLEKHPEN+DR++N++SIL+RGPI+P+++W
Sbjct: 6 VDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHVNWF 65
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMK 135
+G+PA + +LL FHT +YI +LVEADK+G + + GT ++PGSW AALLA GTTLSAM+
Sbjct: 66 TGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPGSWEAALLAAGTTLSAMQ 125
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
H+LD HGKIAYALVRPPGHH+QPT ADGYCFLNNA LAV+LALNSG C +V VIDIDVHY
Sbjct: 126 HILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHY 185
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGTAEGFY S+KVLT+SLHMNHGSWG SHPQ G++DELGE G GYNLN+PLPNGTGDR
Sbjct: 186 GNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDR 245
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY +AM ELVVPA+++F P+M+VLVVGQDSSAFDPNGRQ LTM+GYR +G+I+R +A+ +
Sbjct: 246 GYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEH 305
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
S GRLL+VQEGGYHVTY+AYCLHA LEGVL +P LSDPIAYYPE+EA V +ESIK
Sbjct: 306 SHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEEEANAVAAVESIKT 365
Query: 375 YQNDVIPFLKGS 386
Y + +PFL+G+
Sbjct: 366 YHTEFVPFLRGT 377
>gi|413949138|gb|AFW81787.1| hypothetical protein ZEAMMB73_628415 [Zea mays]
Length = 388
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 258/369 (69%), Positives = 317/369 (85%), Gaps = 4/369 (1%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ VFWD+GML HD G+G+FD+G DPGFL+VL++HPEN+DR++N+VSIL+RGPI+ ++SWH
Sbjct: 21 LAVFWDEGMLAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIAHFLSWH 80
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMK 135
SG PA +LLSFH+ + ELV+ + G K +C+GT LNPGSWGAALLA GTTLS+ K
Sbjct: 81 SGRPAHASELLSFHSSE---ELVQTNATGAKKKLCEGTFLNPGSWGAALLAAGTTLSSAK 137
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYG 195
H+LDG G +AYALVRPPGHHAQP ADGYCFLNNAGLAVQLAL+SG KV V+DIDVHYG
Sbjct: 138 HILDGQGNLAYALVRPPGHHAQPDHADGYCFLNNAGLAVQLALDSGRAKVAVVDIDVHYG 197
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGTAEGFYR++ VLT+SLHM HGSWGPSHPQ+G+VDE+GEG+G GYNLNIPLPNG+GD G
Sbjct: 198 NGTAEGFYRTDTVLTMSLHMMHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAG 257
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y +AM ELVVP+I KF+P ++ LVVGQDSSAFDPNGRQCLTM+GYR++G+I+R LADR+
Sbjct: 258 YEYAMNELVVPSIDKFQPQLLFLVVGQDSSAFDPNGRQCLTMEGYRKIGQIMRRLADRHC 317
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
G++L+VQEGGYH+TYSAYCLHATLEGVL+L LL DPIAYYPED+ + +KV++ IK Y
Sbjct: 318 NGQILVVQEGGYHITYSAYCLHATLEGVLDLEAPLLDDPIAYYPEDDKYTMKVVDMIKSY 377
Query: 376 QNDVIPFLK 384
+ +PFLK
Sbjct: 378 WKESVPFLK 386
>gi|294461787|gb|ADE76452.1| unknown [Picea sitchensis]
Length = 381
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/380 (69%), Positives = 317/380 (83%), Gaps = 6/380 (1%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
M +S SE + I++VFW++GMLNHD G GLFDT DPGFLEVLEKHPEN+DRI+N+
Sbjct: 1 MDSSKSEDAN-----ILHVFWNEGMLNHDLGTGLFDTLEDPGFLEVLEKHPENADRIRNM 55
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSW 120
+SIL++GPI+PYI WH+G A + +L SFHTP+Y++ L +A AGGK +C GT LNPGSW
Sbjct: 56 LSILRKGPIAPYIQWHTGRAAYLSELYSFHTPEYVDMLAKASTAGGKTLCHGTRLNPGSW 115
Query: 121 GAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS 180
AALLA GTTL AM ++LDGHGK++YALVRPPGHHAQPT ADGYCFLNNAGLAVQLA+ S
Sbjct: 116 EAALLAAGTTLEAMHYILDGHGKLSYALVRPPGHHAQPTQADGYCFLNNAGLAVQLAVES 175
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG 240
GC +V V+DIDVHYGNGTAEGFY + VLTISLHMNHGSWGPSH Q G DE+G G+G G
Sbjct: 176 GCKRVAVVDIDVHYGNGTAEGFYERDDVLTISLHMNHGSWGPSHLQTGLHDEVGRGKGLG 235
Query: 241 YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY 300
+NLN+PLPNGTGD+GY HAM ELVVPAI KF P MI+LV+GQDSSAFDPNGR+CLTM+GY
Sbjct: 236 FNLNVPLPNGTGDKGYEHAMHELVVPAISKFMPEMILLVIGQDSSAFDPNGRECLTMEGY 295
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE 360
R++G+I+R AD++SGGRLL+VQEGGYH+TY+AYCLHATLEGVL+LP LLSDP+AYYPE
Sbjct: 296 RKIGQIMRQQADQFSGGRLLVVQEGGYHITYAAYCLHATLEGVLSLPHPLLSDPLAYYPE 355
Query: 361 DEAFPVKVIESIKQYQNDVI 380
+ + +V IK Y +I
Sbjct: 356 YDMYSERVT-FIKNYWQGLI 374
>gi|297843628|ref|XP_002889695.1| hypothetical protein ARALYDRAFT_470906 [Arabidopsis lyrata subsp.
lyrata]
gi|297335537|gb|EFH65954.1| hypothetical protein ARALYDRAFT_470906 [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/377 (68%), Positives = 324/377 (85%), Gaps = 3/377 (0%)
Query: 13 AEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY 72
A+ ++VFW +GML HD +G+FDTG DPGFL+VLEKHPEN+DR++N++SIL+RGPI+P+
Sbjct: 2 AKSRVDVFWHEGMLRHDAVEGVFDTGHDPGFLDVLEKHPENADRVRNMLSILRRGPIAPH 61
Query: 73 ISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTL 131
++W +G PA + +LL FHT +YI+ELVEADK+G + + GT ++PGSW AALLA GTTL
Sbjct: 62 VNWFTGRPAIVSELLMFHTSEYIDELVEADKSGERREIAAGTFMSPGSWEAALLAAGTTL 121
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDI 190
SAM+H+LD HGK+AYALVRPPGHH+QP+ ADGYCFLNNA LAV+LALNSG C +V VIDI
Sbjct: 122 SAMQHILDCHGKVAYALVRPPGHHSQPSQADGYCFLNNAALAVKLALNSGSCSRVAVIDI 181
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVHYGNGTAEGFY S++VLT+SLHMNHGSWG SHPQ G++DELGE G GYNLN+PLPNG
Sbjct: 182 DVHYGNGTAEGFYSSDEVLTVSLHMNHGSWGSSHPQKGSIDELGEDLGLGYNLNVPLPNG 241
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS-AFDPNGRQCLTMDGYREMGRIVRS 309
TGDRGY +AMTELVVPA+++F P+M+VLVVGQDSS AFDPNGRQ LTM+GYR +G+I+R
Sbjct: 242 TGDRGYEYAMTELVVPAVRRFGPDMVVLVVGQDSSYAFDPNGRQSLTMNGYRRIGQIIRG 301
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVI 369
+A+ +S GRLL+VQEGGYHVTY+AYCLHA LEGVL +P LSDPIAYYPE+EA V +
Sbjct: 302 VAEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLMIPEPHLSDPIAYYPEEEAIAVAAV 361
Query: 370 ESIKQYQNDVIPFLKGS 386
ESIK+Y ++ +P L+G+
Sbjct: 362 ESIKRYHSEFVPSLRGT 378
>gi|125552495|gb|EAY98204.1| hypothetical protein OsI_20117 [Oryza sativa Indica Group]
Length = 396
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 258/368 (70%), Positives = 310/368 (84%), Gaps = 2/368 (0%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
VFW +GML HD G+G+F G DPGFL+VL+ HPEN+DR++N+VSIL+RGPI+ ++SWHSG
Sbjct: 27 VFWHEGMLAHDAGRGVFGRGLDPGFLDVLDHHPENADRVRNMVSILRRGPIARFLSWHSG 86
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGK--MVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
PA +LLSFH+ +YI ELV+AD AG +C+ T LNPGSW AALLA GTTLSAMKH
Sbjct: 87 RPAHAAELLSFHSAEYIEELVQADSAGANNNKICECTFLNPGSWDAALLAAGTTLSAMKH 146
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+LDGH KIAYALVRPPGHHAQP ADGYCFLNNAGLAV+LAL+SG +V V+DIDVHYGN
Sbjct: 147 ILDGHAKIAYALVRPPGHHAQPDRADGYCFLNNAGLAVKLALDSGRRRVAVVDIDVHYGN 206
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GTAEGFY ++ VLTISLHM HGSWGPSHPQ+G VDE GEG G GYNLNIPLPNG+GD GY
Sbjct: 207 GTAEGFYHTDSVLTISLHMKHGSWGPSHPQSGLVDETGEGRGLGYNLNIPLPNGSGDAGY 266
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+AM ELVVPAI+KF P ++V VVGQDSSAFDPNGRQCLTMDGYR++G+I+R +AD++S
Sbjct: 267 EYAMNELVVPAIEKFRPELMVFVVGQDSSAFDPNGRQCLTMDGYRKIGQIMRGMADQHSN 326
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
G++LIVQEGGYH+TYSAYCLHATLEGVLNL LL DP+ +YP+DE + ++ ++ IK+
Sbjct: 327 GQILIVQEGGYHITYSAYCLHATLEGVLNLQAPLLDDPLGFYPDDEKYTMQAVDIIKKCW 386
Query: 377 NDVIPFLK 384
+ IPFLK
Sbjct: 387 KESIPFLK 394
>gi|6664310|gb|AAF22892.1|AC006932_9 T27G7.14 [Arabidopsis thaliana]
Length = 425
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/420 (62%), Positives = 321/420 (76%), Gaps = 50/420 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
++VFW +GML HD +G+FDTG+DPGFL+VLEKHPEN+DR++N++SIL+RGPI+P+++W
Sbjct: 6 VDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHVNWF 65
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMK 135
+G+PA + +LL FHT +YI +LVEADK+G + + GT ++PGSW AALLA GTTLSAM+
Sbjct: 66 TGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPGSWEAALLAAGTTLSAMQ 125
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
H+LD HGKIAYALVRPPGHH+QPT ADGYCFLNNA LAV+LALNSG C +V VIDIDVHY
Sbjct: 126 HILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHY 185
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGTAEGFY S+KVLT+SLHMNHGSWG SHPQ G++DELGE G GYNLN+PLPNGTGDR
Sbjct: 186 GNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDR 245
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA---------------------------- 286
GY +AM ELVVPA+++F P+M+VLVVGQDSSA
Sbjct: 246 GYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAVSSFFAQIRVDYLTEHLLRVLFAIIVLF 305
Query: 287 --------------------FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGG 326
FDPNGRQ LTM+GYR +G+I+R +A+ +S GRLL+VQEGG
Sbjct: 306 VRGFECHGLTDNHYLLSDLQFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHGRLLMVQEGG 365
Query: 327 YHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
YHVTY+AYCLHA LEGVL +P LSDPIAYYPE+EA V +ESIK Y + +PFL+G+
Sbjct: 366 YHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEEEANAVAAVESIKTYHTEFVPFLRGT 425
>gi|168038538|ref|XP_001771757.1| histone deacetylase complex, catalytic component HDA1
[Physcomitrella patens subsp. patens]
gi|162676888|gb|EDQ63365.1| histone deacetylase complex, catalytic component HDA1
[Physcomitrella patens subsp. patens]
Length = 374
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/358 (68%), Positives = 300/358 (83%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
++VF+ + ML H+ G G+FDT DPGFL+VLE HPEN+DRI+NI SIL+RGPI+P+I+WH
Sbjct: 4 VHVFFHEDMLKHNNGYGVFDTFEDPGFLDVLEPHPENADRIRNIRSILQRGPIAPFITWH 63
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
G P +I L FHTP+YI EL++AD AGG+++C GT L+PGSW AALLA G+ AM++
Sbjct: 64 EGRPCEIESLERFHTPEYIKELIDADSAGGEIICAGTRLHPGSWAAALLAAGSAQQAMQY 123
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+LDGHG++AYALVRPPGHHAQPT ADGYCFLNNAG+AV+LA++ GC +VVV+DIDVHYGN
Sbjct: 124 LLDGHGQLAYALVRPPGHHAQPTQADGYCFLNNAGIAVELAVHQGCKRVVVLDIDVHYGN 183
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GTAEGFY V TISLHMNHGSWGPSHPQ G DE GEG G G+NLNIPLPNGTG++GY
Sbjct: 184 GTAEGFYSRKDVYTISLHMNHGSWGPSHPQTGLTDECGEGLGKGFNLNIPLPNGTGNKGY 243
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
HAMTELVVPA+ +F+P MIVL VGQDSS FDPNGR CLTM+GYR +G+IVR AD YSG
Sbjct: 244 EHAMTELVVPAMAEFKPEMIVLTVGQDSSEFDPNGRMCLTMEGYRRIGQIVREFADEYSG 303
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
GR+L+VQEGGYHV+YSAYC+HATLEG+L+LP LL+DPI YYPED+++ + IK+
Sbjct: 304 GRVLVVQEGGYHVSYSAYCVHATLEGLLDLPTPLLADPIGYYPEDQSYSTARVAEIKR 361
>gi|16226923|gb|AAL16299.1|AF428369_1 At1g08460/T27G7_7 [Arabidopsis thaliana]
Length = 329
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/329 (70%), Positives = 282/329 (85%), Gaps = 2/329 (0%)
Query: 60 IVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPG 118
++SIL+RGPI+P+++W +G+PA + +LL FHT +YI +LVEADK+G + + GT ++PG
Sbjct: 1 MLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPG 60
Query: 119 SWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL 178
SW AALLA GTTLSAM+H+LD HGKIAYALVRPPGHH+QPT ADGYCFLNNA LAV+LAL
Sbjct: 61 SWEAALLAAGTTLSAMQHILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLAL 120
Query: 179 NSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGE 237
NSG C +V VIDIDVHYGNGTAEGFY S+KVLT+SLHMNHGSWG SHPQ G++DELGE
Sbjct: 121 NSGSCSRVAVIDIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDV 180
Query: 238 GFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTM 297
G GYNLN+PLPNGTGDRGY +AM ELVVPA+++F P+M+VLVVGQDSSAFDPNGRQ LTM
Sbjct: 181 GLGYNLNVPLPNGTGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTM 240
Query: 298 DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAY 357
+GYR +G+I+R +A+ +S GRLL+VQEGGYHVTY+AYCLHA LEGVL +P LSDPIAY
Sbjct: 241 NGYRRIGQIMRGVAEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAY 300
Query: 358 YPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
YPE+EA V +ESIK Y + +PFL+G+
Sbjct: 301 YPEEEANAVAAVESIKTYHTEFVPFLRGT 329
>gi|302770587|ref|XP_002968712.1| hypothetical protein SELMODRAFT_170187 [Selaginella moellendorffii]
gi|300163217|gb|EFJ29828.1| hypothetical protein SELMODRAFT_170187 [Selaginella moellendorffii]
Length = 371
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/363 (62%), Positives = 279/363 (76%), Gaps = 5/363 (1%)
Query: 17 INVFWDDGMLNHDTGKGLFDT-GFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
I+VFW DGML H+ +G+FD+ G L VL++HPEN+ R+ NI SIL++GPISP I W
Sbjct: 4 IHVFWHDGMLKHEPLRGIFDSLSCAGGLLAVLDQHPENATRVLNIKSILEKGPISPRIVW 63
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV-CDGTVLNPGSWGAALLAVGTTLSAM 134
H G A I +L FH PDYI +L++ADKAGG + GT NPGSW AALLA G+TL A+
Sbjct: 64 HQGRMATIQELHLFHDPDYIQKLIDADKAGGTTIFAPGTCFNPGSWEAALLAAGSTLDAV 123
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVH 193
KHVL+G K+AYALVRPPGHHAQP+ ADGYCFLNNAGLAVQ AL+S K V V+DIDVH
Sbjct: 124 KHVLEGKSKLAYALVRPPGHHAQPSRADGYCFLNNAGLAVQFALSSSSVKRVAVLDIDVH 183
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTG 252
YGNGTA GFY + VLTISLHM+HG W SH + G +E G G+G GYN+NIPLPNGTG
Sbjct: 184 YGNGTAAGFYSRDDVLTISLHMDHGPWDESHSAEFGQPEEAGTGKGVGYNVNIPLPNGTG 243
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
DRGY HAM +LVVP ++ FEP +IV+ +GQDSSAFDPNGRQCLTM GYR +GR++R A+
Sbjct: 244 DRGYQHAMEKLVVPRLESFEPELIVVTMGQDSSAFDPNGRQCLTMKGYRVLGRMIREQAE 303
Query: 313 RYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV-KVIES 371
++S GR+++VQEGGY Y+A+C+HATLEGV + ALL DPIAYYPEDE + + KV E
Sbjct: 304 KHSSGRMVLVQEGGYQPCYTAFCVHATLEGVAGVDEALLDDPIAYYPEDETYAILKVAEL 363
Query: 372 IKQ 374
K+
Sbjct: 364 EKR 366
>gi|302817847|ref|XP_002990598.1| hypothetical protein SELMODRAFT_185423 [Selaginella moellendorffii]
gi|300141520|gb|EFJ08230.1| hypothetical protein SELMODRAFT_185423 [Selaginella moellendorffii]
Length = 371
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/363 (62%), Positives = 277/363 (76%), Gaps = 5/363 (1%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPG-FLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
I+VFW DGML H+ G+FD+ G L VL++HPEN+ R+ NI SIL++GPISP I W
Sbjct: 4 IHVFWHDGMLKHEPLHGIFDSLSGAGRLLAVLDQHPENATRVLNIKSILEKGPISPRIVW 63
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV-CDGTVLNPGSWGAALLAVGTTLSAM 134
H G A I +L FH PDYI +L++ADKAGG + GT NPGSW AALLA G+TL A+
Sbjct: 64 HQGRMATIQELHLFHDPDYIQKLIDADKAGGTTIFAPGTCFNPGSWEAALLAAGSTLDAV 123
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVH 193
KHVL+G +AYALVRPPGHHAQP+ ADGYCFLNNAGLAVQ AL+S K V V+DIDVH
Sbjct: 124 KHVLEGKSNLAYALVRPPGHHAQPSRADGYCFLNNAGLAVQFALSSASVKRVAVVDIDVH 183
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPNGTG 252
YGNGTA GFY + VLTISLHM+HG W SH + G +E G G+G GYN+NIPLPNGTG
Sbjct: 184 YGNGTAAGFYSRDDVLTISLHMDHGPWDESHSAEFGQPEEAGTGKGVGYNVNIPLPNGTG 243
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
DRGY HAM +LVVP ++ FEP +IV+ +GQDSSAFDPNGRQCLTM GYR +GR++R A+
Sbjct: 244 DRGYQHAMEKLVVPRLESFEPELIVVTMGQDSSAFDPNGRQCLTMKGYRVLGRMIREQAE 303
Query: 313 RYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV-KVIES 371
++S GR+++VQEGGY Y+A+C+HATLEGV + ALL DPIAYYPEDE + + KV E
Sbjct: 304 KHSSGRMVLVQEGGYQPCYTAFCVHATLEGVAGVDEALLDDPIAYYPEDETYAILKVAEL 363
Query: 372 IKQ 374
K+
Sbjct: 364 EKR 366
>gi|115464137|ref|NP_001055668.1| Os05g0440300 [Oryza sativa Japonica Group]
gi|53749228|gb|AAU90088.1| unknown protein [Oryza sativa Japonica Group]
gi|113579219|dbj|BAF17582.1| Os05g0440300 [Oryza sativa Japonica Group]
gi|222631737|gb|EEE63869.1| hypothetical protein OsJ_18693 [Oryza sativa Japonica Group]
Length = 395
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/290 (72%), Positives = 246/290 (84%), Gaps = 2/290 (0%)
Query: 97 ELVEADKAGGK--MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
ELV+AD AG +C+ T LNPGSW AALLA GTTLSAMKH+LDGH KIAYALVRPPGH
Sbjct: 104 ELVQADSAGANNNKICECTFLNPGSWDAALLAAGTTLSAMKHILDGHAKIAYALVRPPGH 163
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HAQP ADGYCFLNNAGLAV+LAL+SG +V V+DIDVHYGNGTAEGFY ++ VLTISLH
Sbjct: 164 HAQPDRADGYCFLNNAGLAVKLALDSGRRRVAVVDIDVHYGNGTAEGFYHTDSVLTISLH 223
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
M HGSWGPSHPQ+G VDE GEG G GYNLNIPLPNG+GD GY +AM ELVVPAI+KF P
Sbjct: 224 MKHGSWGPSHPQSGLVDETGEGRGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFRPE 283
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
++V VVGQDSSAFDPNGRQCLTMDGYR++G+I+R +AD++S G++LIVQEGGYH+TYSAY
Sbjct: 284 LMVFVVGQDSSAFDPNGRQCLTMDGYRKIGQIMRGMADQHSNGQILIVQEGGYHITYSAY 343
Query: 335 CLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
CLHATLEGVLNL LL DP+ +YP+DE + ++ ++ IK+ + IPFLK
Sbjct: 344 CLHATLEGVLNLQAPLLDDPLGFYPDDEKYTMQAVDIIKKCWKESIPFLK 393
>gi|226505268|ref|NP_001142413.1| uncharacterized protein LOC100274588 [Zea mays]
gi|194708698|gb|ACF88433.1| unknown [Zea mays]
gi|413949139|gb|AFW81788.1| hypothetical protein ZEAMMB73_628415 [Zea mays]
gi|413949157|gb|AFW81806.1| hypothetical protein ZEAMMB73_483858 [Zea mays]
Length = 299
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/271 (71%), Positives = 235/271 (86%), Gaps = 1/271 (0%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ VFWD+GML HD G+G+FD+G DPGFL+VL++HPEN+DR++N+VSIL+RGPI+ ++SWH
Sbjct: 21 LAVFWDEGMLAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIAHFLSWH 80
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMK 135
SG PA +LLSFH+ +YI ELV+ + G K +C+GT LNPGSWGAALLA GTTLS+ K
Sbjct: 81 SGRPAHASELLSFHSSEYIEELVQTNATGAKKKLCEGTFLNPGSWGAALLAAGTTLSSAK 140
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYG 195
H+LDG G +AYALVRPPGHHAQP ADGYCFLNNAGLAVQLAL+SG KV V+DIDVHYG
Sbjct: 141 HILDGQGNLAYALVRPPGHHAQPDHADGYCFLNNAGLAVQLALDSGRAKVAVVDIDVHYG 200
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGTAEGFYR++ VLT+SLHM HGSWGPSHPQ+G+VDE+GEG+G GYNLNIPLPNG+GD G
Sbjct: 201 NGTAEGFYRTDTVLTMSLHMMHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAG 260
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
Y +AM ELVVP+I KF+P ++ LVVGQDSSA
Sbjct: 261 YEYAMNELVVPSIDKFQPQLLFLVVGQDSSA 291
>gi|413949156|gb|AFW81805.1| hypothetical protein ZEAMMB73_483858 [Zea mays]
Length = 594
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/271 (70%), Positives = 233/271 (85%), Gaps = 4/271 (1%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ VFWD+GML HD G+G+FD+G DPGFL+VL++HPEN+DR++N+VSIL+RGPI+ ++SWH
Sbjct: 21 LAVFWDEGMLAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIAHFLSWH 80
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMK 135
SG PA +LLSFH+ + ELV+ + G K +C+GT LNPGSWGAALLA GTTLS+ K
Sbjct: 81 SGRPAHASELLSFHSSE---ELVQTNATGAKKKLCEGTFLNPGSWGAALLAAGTTLSSAK 137
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYG 195
H+LDG G +AYALVRPPGHHAQP ADGYCFLNNAGLAVQLAL+SG KV V+DIDVHYG
Sbjct: 138 HILDGQGNLAYALVRPPGHHAQPDHADGYCFLNNAGLAVQLALDSGRAKVAVVDIDVHYG 197
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGTAEGFYR++ VLT+SLHM HGSWGPSHPQ+G+VDE+GEG+G GYNLNIPLPNG+GD G
Sbjct: 198 NGTAEGFYRTDTVLTMSLHMMHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAG 257
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
Y +AM ELVVP+I KF+P ++ LVVGQDSSA
Sbjct: 258 YEYAMNELVVPSIDKFQPQLLFLVVGQDSSA 288
>gi|356543632|ref|XP_003540264.1| PREDICTED: histone deacetylase 8-like isoform 2 [Glycine max]
Length = 303
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 173/210 (82%), Positives = 194/210 (92%)
Query: 171 GLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTV 230
GLAVQLAL+SGC KV VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ+G+V
Sbjct: 93 GLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQSGSV 152
Query: 231 DELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPN 290
DELGEGEG+G+NLNIPLPNGTGD+GYVHA ELVVP+IQKF P+MIVLV+GQDS+AFDPN
Sbjct: 153 DELGEGEGYGFNLNIPLPNGTGDKGYVHAFNELVVPSIQKFGPDMIVLVLGQDSNAFDPN 212
Query: 291 GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLAL 350
GRQCLTM+GYRE+GRIV LA R+S GRLLIVQEGGYHVTYSAYCLHATLEG+LNLP+ L
Sbjct: 213 GRQCLTMEGYREIGRIVHLLAKRHSAGRLLIVQEGGYHVTYSAYCLHATLEGILNLPMPL 272
Query: 351 LSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
L+DPIA+Y +DE F V+VIE+IK YQ D +
Sbjct: 273 LADPIAFYLDDETFSVQVIEAIKNYQKDKV 302
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 77/92 (83%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
MA + +E S + G I+VFW +GML HDTG G+FDTG DPGFLEVLEKHPENSDR+KN+
Sbjct: 1 MADAGAEGASSSTVGQIDVFWHEGMLKHDTGNGVFDTGMDPGFLEVLEKHPENSDRVKNL 60
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTP 92
VSILKRGPISPYISWH G PA+IP+L SFHTP
Sbjct: 61 VSILKRGPISPYISWHLGTPAKIPELFSFHTP 92
>gi|94442894|emb|CAJ91129.1| histone deacetylase [Platanus x acerifolia]
Length = 212
Score = 360 bits (923), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 164/209 (78%), Positives = 187/209 (89%)
Query: 175 QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELG 234
QLAL +GC +V IDIDVHYGNGTAEGFYRS+ VLTISLHMNHGSWGPSHPQ G++DELG
Sbjct: 1 QLALEAGCRRVATIDIDVHYGNGTAEGFYRSDNVLTISLHMNHGSWGPSHPQRGSIDELG 60
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
EGEGFG+NLNIPLPNGTGDRGY +AM E+VVPA++KFEP+M V+++GQDSSAFDPNGRQC
Sbjct: 61 EGEGFGFNLNIPLPNGTGDRGYAYAMNEVVVPAVEKFEPSMTVMIIGQDSSAFDPNGRQC 120
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
LTMDGYRE+G+IV LAD++S GRLLIVQEGGYH+TYSAYCLHATLEG L+LP LLSDP
Sbjct: 121 LTMDGYREIGQIVHKLADKFSDGRLLIVQEGGYHITYSAYCLHATLEGALDLPHLLLSDP 180
Query: 355 IAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
IAYYPEDEA VKV++SIKQY D +P
Sbjct: 181 IAYYPEDEALAVKVVDSIKQYWKDTVPLF 209
>gi|297171476|gb|ADI22476.1| deacetylases, including yeast histone deacetylase and acetoin
utilization protein [uncultured gamma proteobacterium
HF0500_07A21]
Length = 373
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/360 (47%), Positives = 227/360 (63%), Gaps = 3/360 (0%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ V+W D + HD G + + P + + E H E + RI NI +L+ GP+ I
Sbjct: 6 MRVYWHDDCMLHDGGDSVLENEPPPCIV-LPEPHVETAMRILNIKGMLETGPLKDRIDLR 64
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDG--TVLNPGSWGAALLAVGTTLSAM 134
G A ++L+FHTP Y+ E+ A+ + DG TV+ G++ AA+ A GTTL AM
Sbjct: 65 IGRHATDGEILTFHTPAYLEEIKAANANPKPVRIDGGGTVVADGTFEAAMAAAGTTLDAM 124
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHY 194
V++ G Y+LVRPPGHHAQPTM DG C NN LAV+ A + G K+ VID DVH+
Sbjct: 125 DAVVNEPGGPVYSLVRPPGHHAQPTMGDGNCIYNNVALAVESARSQGVEKIAVIDWDVHH 184
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGT GFY + VLTIS+HMNHGSWGP+HP+ G V+E+G G G G+N N+PLP G G+
Sbjct: 185 GNGTQAGFYDRSDVLTISIHMNHGSWGPNHPELGLVEEIGSGAGIGFNRNVPLPYGVGNS 244
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y + +LV P I +F P +IV+ G D++AFDPNGR +TMDG+R +G I R LA R+
Sbjct: 245 CYEAILADLVTPLIDEFAPTVIVIAAGVDANAFDPNGRMVVTMDGFRRLGLIARDLAARH 304
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
GRLL+VQEGGY TY+AY +EGVL L LL DPIAYYP+ + V+ I+
Sbjct: 305 CDGRLLLVQEGGYSPTYTAYSAQGMIEGVLGLKEGLLIDPIAYYPDRSEHGLAVLPEIRS 364
>gi|448354158|ref|ZP_21542922.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
gi|445638555|gb|ELY91682.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
Length = 372
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 215/371 (57%), Gaps = 6/371 (1%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
I FWD+ + H+ G F++ + G L + HP+ +R+KNI SI++ ++ +++
Sbjct: 5 ITAFWDESFIAHEQPAGEFESEW-TGRLAYRQPHPDRPERLKNIYSIVQ-SELADHVTLA 62
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
PA QL HT D+I++L GG + T N ++ AA A G T A +H
Sbjct: 63 DVEPATRVQLERTHTADHIDDLQAFCADGGGRITAETGANEHTFRAATHAAGATCLAAEH 122
Query: 137 VLDG-HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHY 194
L+ + YA+VRP GHHAQP DG+C+ NN +A L + +V ++D DVH+
Sbjct: 123 ALETPSDNVPYAMVRPSGHHAQPEQVDGFCYFNNVAVAADHVLETTDTERVAIVDWDVHH 182
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GNGT E F + VL I +H +H SW P +HPQ G +DE+G G+G GYN+N+PLP GTGD
Sbjct: 183 GNGTQECFEDRDDVLVIGIHNDHWSWDPEAHPQTGDLDEVGTGDGEGYNVNVPLPPGTGD 242
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
GY H +V P ++ ++P+++++ GQD+ DP GR +T G+ E+GR R LAD
Sbjct: 243 EGYEHVFDRIVEPLLRSYDPDLLLISAGQDAGTMDPLGRNVVTKGGFEELGRRARVLADE 302
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIK 373
Y+ G L +VQEGGY V++ AY LEGVL + + DP+A+ ED + IE I
Sbjct: 303 YADGNLAVVQEGGYQVSHLAYATLGVLEGVLGVETG-IDDPMAWMDEDYDSAQRAIEDIA 361
Query: 374 QYQNDVIPFLK 384
Y ++ P L+
Sbjct: 362 AYHSEYWPVLE 372
>gi|448356884|ref|ZP_21545602.1| histone deacetylase [Natrialba chahannaoensis JCM 10990]
gi|445651852|gb|ELZ04758.1| histone deacetylase [Natrialba chahannaoensis JCM 10990]
Length = 372
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 213/371 (57%), Gaps = 6/371 (1%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
I FWD+ + H+ G F++ + G L + HP+ +R+KNI SI++ ++ +++
Sbjct: 5 ITAFWDESFIAHEQPAGEFESEW-TGRLAYRQPHPDRPERLKNIFSIIQ-AELADHVTLA 62
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
PA QL HT +I+EL GG + T N ++ AA A G T A +H
Sbjct: 63 DVEPATREQLERTHTAAHIDELQAFCADGGGRITAETGANEHTFRAATHAAGATCLAAEH 122
Query: 137 VLDG-HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHY 194
L+ + YA+VRP GHHAQP DG+C+ NN +A L + +V ++D DVH+
Sbjct: 123 ALETPADNVPYAMVRPSGHHAQPEQVDGFCYFNNVAVAADHVLETTDTERVAIVDWDVHH 182
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GNGT E F + VL IS+H +H SW P +HPQ G +DE+G G+G GYN+N+PLP GTGD
Sbjct: 183 GNGTQECFEDRDDVLVISIHNDHWSWDPEAHPQTGDLDEVGTGDGEGYNVNVPLPPGTGD 242
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
GY H +V P ++ ++P ++++ GQD+ DP GR +T G+ E+GR R LAD
Sbjct: 243 EGYEHVFDRIVEPLLRSYDPGLLLISAGQDAGTMDPLGRNVVTKGGFEELGRRARVLADE 302
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIK 373
Y+ G L +VQEGGY V++ AY LEGVL + + DP+A+ ED IE I
Sbjct: 303 YADGNLAVVQEGGYQVSHLAYATLGVLEGVLGVETG-IDDPMAWMDEDYDSARHAIEDIA 361
Query: 374 QYQNDVIPFLK 384
Y ++ P L+
Sbjct: 362 TYHSEYWPVLE 372
>gi|413949137|gb|AFW81786.1| hypothetical protein ZEAMMB73_628415 [Zea mays]
Length = 176
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 152/174 (87%)
Query: 211 ISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQK 270
+SLHM HGSWGPSHPQ+G+VDE+GEG+G GYNLNIPLPNG+GD GY +AM ELVVP+I K
Sbjct: 1 MSLHMMHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAGYEYAMNELVVPSIDK 60
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
F+P ++ LVVGQDSSAFDPNGRQCLTM+GYR++G+I+R LADR+ G++L+VQEGGYH+T
Sbjct: 61 FQPQLLFLVVGQDSSAFDPNGRQCLTMEGYRKIGQIMRRLADRHCNGQILVVQEGGYHIT 120
Query: 331 YSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
YSAYCLHATLEGVL+L LL DPIAYYPED+ + +KV++ IK Y + +PFLK
Sbjct: 121 YSAYCLHATLEGVLDLEAPLLDDPIAYYPEDDKYTMKVVDMIKSYWKESVPFLK 174
>gi|433609555|ref|YP_007041924.1| putative deacetylase [Saccharothrix espanaensis DSM 44229]
gi|407887408|emb|CCH35051.1| putative deacetylase [Saccharothrix espanaensis DSM 44229]
Length = 355
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 213/351 (60%), Gaps = 14/351 (3%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ FW D L HDTG+GL++ P +L+ E HPEN+ R++ L GPI+P+++W
Sbjct: 1 MEFFWHDACLEHDTGEGLWELPGTPEWLDAAEPHPENAARLRTFRHALTHGPIAPHLTWS 60
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLSAMK 135
G A +L H P Y++ L + AG ++ + TV+ PGSW A A GT L+A +
Sbjct: 61 QGRFATDEELARVHAPAYLSSLYKDCHAGRQVSLETNTVVGPGSWDAIRAAAGTALAAAE 120
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYG 195
V +G ++AYALVRPPGHHAQ + DGYC +NNA L + A +G +V V+D DVH+G
Sbjct: 121 AVAEGRTRMAYALVRPPGHHAQRDLPDGYCMVNNAALVAETARRAG-RRVAVLDWDVHHG 179
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGT + F ++VLTIS+HM HG WG +H Q G +E G G NLN+ L G GD
Sbjct: 180 NGTQDVFRDVDEVLTISVHMRHGPWGANHVQTGGPEESGPG-----NLNVELSLGAGDTA 234
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y A+ EL VPAI+ + +V G D SAFDPNGR LT GYR++GR V +L
Sbjct: 235 YRRALDELAVPAIRAHGADFLVCASGFDGSAFDPNGRHNLTAAGYRDIGRKVAAL----- 289
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV 366
++ QEGGY YSA CLHA +EG++ + LL DP+AY P D+A PV
Sbjct: 290 DLPTVLTQEGGYLRGYSALCLHALVEGLVGVG-PLLDDPLAYLP-DDARPV 338
>gi|289583553|ref|YP_003481963.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|448281641|ref|ZP_21472941.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|289533051|gb|ADD07401.1| Histone deacetylase [Natrialba magadii ATCC 43099]
gi|445578006|gb|ELY32425.1| histone deacetylase [Natrialba magadii ATCC 43099]
Length = 372
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 215/371 (57%), Gaps = 6/371 (1%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
I FWD+ + H+ G F++ + G L + HP+ +R+KNI SIL+ ++ +++
Sbjct: 5 ITAFWDESFIAHEQPAGEFESEW-TGRLAYRQPHPDRPERLKNIYSILQ-AELADHVTLA 62
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
PA QL HT D+I++L GG + T N ++ AA A G A +H
Sbjct: 63 DVEPATRVQLERTHTADHIDDLQAFCADGGGRITAETGANEHTFRAATHAAGAACLAAEH 122
Query: 137 VLDGH-GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHY 194
L+ + YA+VRP GHHAQP DG+C+ NN +A L + +V ++D DVH+
Sbjct: 123 ALEHSLDNVPYAMVRPSGHHAQPEQVDGFCYFNNVAVAADHILETTDTERVAIVDWDVHH 182
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GNGT E F + VL I +H +H SW P +HPQ G +DE+G G+G GYN+N+PLP GTGD
Sbjct: 183 GNGTQECFEDRDDVLVIGIHNDHWSWDPEAHPQTGDLDEVGTGDGEGYNVNVPLPPGTGD 242
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
GY H +V P ++ ++P+++++ GQD+ DP GR +T G+ E+GR R LAD
Sbjct: 243 EGYEHVFDRIVEPLLRSYDPDLLLISAGQDAGTMDPLGRNVVTKGGFEELGRRARVLADE 302
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIK 373
Y+GG L +VQEGGY V++ AY LEGVL + + DP+A+ ED + IE I
Sbjct: 303 YAGGNLAVVQEGGYQVSHLAYATLGVLEGVLGVETG-IDDPMAWMDEDYDSARRTIEDIA 361
Query: 374 QYQNDVIPFLK 384
Y ++ P L+
Sbjct: 362 TYHSEYWPALE 372
>gi|167859777|gb|ACA04842.1| histone deacetylase superfamily protein [Picea abies]
Length = 163
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/162 (76%), Positives = 139/162 (85%)
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
AGGK + GT LNPGSW AALL GTTL AM+++LDGHGK++YALVRPPGHHAQPT ADG
Sbjct: 2 AGGKTLRHGTRLNPGSWEAALLVAGTTLEAMRYILDGHGKLSYALVRPPGHHAQPTQADG 61
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
YCFLNNAGLAVQLA+ SGC +V V+DIDVHYGNGTAEGFY + VLTISLHMNHGSWGPS
Sbjct: 62 YCFLNNAGLAVQLAVESGCKRVAVVDIDVHYGNGTAEGFYERDDVLTISLHMNHGSWGPS 121
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVV 265
H Q G DE+G G+G G+NLN+PLPNGTGD+GY HAM ELVV
Sbjct: 122 HLQTGLHDEVGRGKGLGFNLNVPLPNGTGDKGYEHAMHELVV 163
>gi|356547109|ref|XP_003541960.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 8-like [Glycine
max]
Length = 228
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 157/222 (70%), Gaps = 18/222 (8%)
Query: 165 CFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
CFL NAGLAVQ +L+SGC VV+IDIDVHYGNGTAEGFYRS+KV GPSH
Sbjct: 25 CFLKNAGLAVQ-SLDSGCKMVVIIDIDVHYGNGTAEGFYRSDKVX-----------GPSH 72
Query: 225 PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
PQ+G+VDELGEGEG+G+NLNI +R + + ++P +Q ++ + Q
Sbjct: 73 PQSGSVDELGEGEGYGFNLNISWKYIDQNRNFDLFLN--LLPRVQSKHQSLTIKRNQQQD 130
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
FDPNGRQCLTM+GYRE + LA R+S GRLLIVQEG YHVTYSAYCLHATLE +L
Sbjct: 131 HLFDPNGRQCLTMEGYRE----IXGLAKRHSEGRLLIVQEGSYHVTYSAYCLHATLEEIL 186
Query: 345 NLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
NLP+ L+ DPIAYY EDE F +KVIE+IK YQ D +P + S
Sbjct: 187 NLPMPLVPDPIAYYLEDETFSIKVIEAIKNYQKDKVPLWRNS 228
>gi|448295292|ref|ZP_21485361.1| histone deacetylase superfamily protein [Halalkalicoccus jeotgali
B3]
gi|445584477|gb|ELY38796.1| histone deacetylase superfamily protein [Halalkalicoccus jeotgali
B3]
Length = 375
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 217/363 (59%), Gaps = 16/363 (4%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRG--PISPYIS 74
I V+W D ML+H+ KG F P + E HP+ +R++NI++++ S +
Sbjct: 5 ITVYWHDRMLDHEPPKGAFKYPSTP-IVAHDEVHPDRPERVENILAMINHSFPERSQIVE 63
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTV-LNPGSWGAALLAVGTTLSA 133
A+I ++ H+ +YI+ + E GG + D T LN ++ A +A G + A
Sbjct: 64 PERATRAEIERV---HSSEYIDWIEEFCADGGGRIEDTTTGLNEATFDTARVAAGAAIGA 120
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVH 193
+ ++G + YAL RP GHHAQPT ADG+CFLNNA +A + A++ +V +ID DVH
Sbjct: 121 VHDSMEGSQDLPYALCRPSGHHAQPTCADGFCFLNNAAIAAEAAIDMSADRVAIIDWDVH 180
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPS-HPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
+GNGT E FY + VL +S H +HGSW P HPQ G+++E+G G GYN+N+PLP GTG
Sbjct: 181 HGNGTQEAFYDRDDVLFVSAHHDHGSWHPEYHPQEGSLEEVGTNRGEGYNVNVPLPPGTG 240
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
DRGY H LV P + +F+P +I++ GQD+ A DPNGR +T G+R++G V++LAD
Sbjct: 241 DRGYNHLFDRLVDPIVSEFDPTVIIVSAGQDAGAADPNGRNLVTRGGFRQLGSRVKTLAD 300
Query: 313 RYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLAL----LSDPIAYYPEDEAFPVKV 368
+ + G+L ++QEGGY ++ ++ EG+L+ + L + DP + E P +
Sbjct: 301 QTADGQLALIQEGGYQPSHLSFATLGVFEGILDRRVDLEHFGMDDPFEWLDE----PTDL 356
Query: 369 IES 371
++S
Sbjct: 357 VDS 359
>gi|448351248|ref|ZP_21540057.1| histone deacetylase [Natrialba taiwanensis DSM 12281]
gi|445634932|gb|ELY88106.1| histone deacetylase [Natrialba taiwanensis DSM 12281]
Length = 370
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 206/364 (56%), Gaps = 6/364 (1%)
Query: 18 NVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHS 77
FW D L H+ G + + G L V + HP+ +R++N+ IL R S I W S
Sbjct: 5 TAFWHDSFLAHEPPAGEGEAEWS-GRLAVKQPHPDRPERVQNVRHIL-RHEFSDEIEWKS 62
Query: 78 GIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHV 137
A QL H P +++ + AGG + GT N + AA A G +A +H
Sbjct: 63 APSATDDQLHRVHEPAHVDSIEAFCAAGGGRITGGTGGNEATARAARHAAGAAAAAAEHA 122
Query: 138 LD-GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYG 195
L+ G + YA VRP GHHAQP DG+CF NNA +AV+ AL ++ +V V+D DVH+G
Sbjct: 123 LEHGLENVPYACVRPSGHHAQPAQVDGFCFFNNAAVAVEQALADATVDRVAVLDWDVHHG 182
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
NGT E FY VLTIS+H +H SW P +HPQ GTVDE G G G GYNLN+PLP GTGD
Sbjct: 183 NGTQEIFYDRADVLTISVHNDHYSWNPDAHPQRGTVDEHGVGPGEGYNLNVPLPPGTGDE 242
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY M LV P ++++P++ V+ G D DP GR +T G+ +GR R LA R
Sbjct: 243 GYRTTMDRLVTPVFEQYDPDLFVVSAGGDPGVVDPLGRNVVTKAGFESLGRRARELAART 302
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ GRL+I+QEGGYH ++ Y + TLEG L+L A ++DP + ED + I
Sbjct: 303 ADGRLVILQEGGYHPSHLGYAMLGTLEGALDLESA-VADPFPWLDEDFDSAADRLSEIVD 361
Query: 375 YQND 378
Y D
Sbjct: 362 YYAD 365
>gi|448364201|ref|ZP_21552795.1| histone deacetylase [Natrialba asiatica DSM 12278]
gi|445645089|gb|ELY98096.1| histone deacetylase [Natrialba asiatica DSM 12278]
Length = 370
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 207/368 (56%), Gaps = 6/368 (1%)
Query: 18 NVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHS 77
FW D + H+ G + + G L V + HP+ +R++N+ IL R I W S
Sbjct: 5 TAFWHDSFVAHEPPAGEGEAEWS-GRLAVKQPHPDRPERVQNVRHIL-RHEFGDEIEWKS 62
Query: 78 GIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHV 137
A QL H P +++ + GG + GT N + AA A G +A +H
Sbjct: 63 APSATDDQLHRVHEPAHVDSIEAFCAGGGGRITGGTGANEATARAARHAAGAAAAAAEHA 122
Query: 138 LD-GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYG 195
L+ G + YA VRP GHHAQP DG+CF NNA +AV+ L ++ ++ V+D DVH+G
Sbjct: 123 LEHGLENVPYACVRPSGHHAQPAQVDGFCFFNNAAVAVEQVLADATVDRIAVLDWDVHHG 182
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
NGT E FY VLTIS+H +H SW P +HPQ GTVDE G G G GYNLN+PLP GTGD+
Sbjct: 183 NGTQEIFYDRADVLTISVHNDHDSWNPDAHPQRGTVDERGVGPGEGYNLNVPLPPGTGDQ 242
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY M LV P +++++P+++V+ G D DP GR +T G+ +GR R LA R
Sbjct: 243 GYRTTMDRLVTPVLEQYDPDLLVVSAGGDPGVVDPLGRNVVTKAGFESLGRRARELAART 302
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ GRL+++QEGGYH ++ Y + TLEG L+L A ++DP + ED + I
Sbjct: 303 ADGRLVVLQEGGYHPSHLGYAMLGTLEGALDLESA-VADPFPWLDEDFDAAADKLAEIVD 361
Query: 375 YQNDVIPF 382
Y D F
Sbjct: 362 YYADWWDF 369
>gi|448367188|ref|ZP_21555036.1| histone deacetylase [Natrialba aegyptia DSM 13077]
gi|445653672|gb|ELZ06541.1| histone deacetylase [Natrialba aegyptia DSM 13077]
Length = 370
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 205/364 (56%), Gaps = 6/364 (1%)
Query: 18 NVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHS 77
FW D L H+ G + + G L V + HP+ +R++N+ IL R I W S
Sbjct: 5 TAFWHDSFLAHEPPAGEGEAEWS-GRLAVKQPHPDRPERVRNVRHIL-RHEFGDEIEWKS 62
Query: 78 GIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHV 137
A QL H P +++ + AGG + GT N + AA A G +A +H
Sbjct: 63 APRATDDQLHRVHEPAHVDSIEAFCAAGGGRITGGTGANEATARAARHAAGAAAAAAEHA 122
Query: 138 LD-GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYG 195
L+ G + YA VRP GHHAQP DG+CF NNA +AV+ L ++ +V V+D DVH+G
Sbjct: 123 LEHGLENVPYACVRPSGHHAQPAQVDGFCFFNNAAVAVEQVLADTTVDRVAVLDWDVHHG 182
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
NGT E FY VLTIS+H +H SW P +HPQ GTVDE G G G GYNLN+PLP GTGD
Sbjct: 183 NGTQEIFYDRADVLTISVHNDHDSWNPDAHPQRGTVDEHGVGPGEGYNLNVPLPPGTGDE 242
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY M LV P + +++P+++V+ G D DP GR +T G+ +GR R LA R
Sbjct: 243 GYRATMDRLVTPVLDQYDPDLLVVSAGGDPGVVDPLGRNVVTKAGFESLGRRARELAART 302
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ GRL+++QEGGYH ++ Y + TLEG L+L A ++DP + ED + I
Sbjct: 303 ADGRLVVLQEGGYHPSHLGYAMLGTLEGALDLESA-VADPFPWLDEDFDSAAGTLAEITD 361
Query: 375 YQND 378
Y D
Sbjct: 362 YYAD 365
>gi|256380501|ref|YP_003104161.1| histone deacetylase superfamily [Actinosynnema mirum DSM 43827]
gi|255924804|gb|ACU40315.1| histone deacetylase superfamily [Actinosynnema mirum DSM 43827]
Length = 354
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 188/321 (58%), Gaps = 12/321 (3%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+FW D L HD G GL++ + +L+ E HPE++ R++ L+ GP++ +++W +G
Sbjct: 1 MFWHDACLEHDAGSGLWELPGEWDWLDEPEPHPESAARLRTFRHALRHGPVAGHLTWSTG 60
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLSAMKHV 137
A +L H P Y+ L A ++ + T++ PGSW A L A GT L+A V
Sbjct: 61 RAATGEELARVHEPGYLAALEAACAGPWRVALEVNTLVGPGSWEAVLAAAGTALAAHDAV 120
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNG 197
G ++AYALVRPPGHHAQP +ADGYC +NNA L + A +G +V V+D DVH+GNG
Sbjct: 121 ASGRTRLAYALVRPPGHHAQPGLADGYCLVNNAALVAETARRAG-RRVAVLDWDVHHGNG 179
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T E F + VLT S+HM HG WG +H Q G DE N+N+ L G GD Y
Sbjct: 180 TQEVFAGTEDVLTASIHMRHGPWGANHRQTGAPDEPALA-----NVNVELSLGAGDHAYA 234
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
AM E+V+PA+++F + +V G D SAFDPNGR LT GYR +G V + G
Sbjct: 235 RAMDEVVLPAVREFGADFLVCASGFDGSAFDPNGRHNLTAAGYRAIGARVAA-----EGL 289
Query: 318 RLLIVQEGGYHVTYSAYCLHA 338
++ QEGGY Y+A CLHA
Sbjct: 290 PTVLTQEGGYLRGYAALCLHA 310
>gi|300713020|ref|YP_003738832.1| histone deacetylase superfamily protein [Halalkalicoccus jeotgali
B3]
gi|299126704|gb|ADJ17041.1| histone deacetylase superfamily protein [Halalkalicoccus jeotgali
B3]
Length = 363
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 212/355 (59%), Gaps = 16/355 (4%)
Query: 25 MLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRG--PISPYISWHSGIPAQ 82
ML+H+ KG F P + E HP+ +R++NI++++ S + A+
Sbjct: 1 MLDHEPPKGAFKYPSTP-IVAHDEVHPDRPERVENILAMINHSFPERSQIVEPERATRAE 59
Query: 83 IPQLLSFHTPDYINELVEADKAGGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGH 141
I ++ H+ +YI+ + E GG + D T LN ++ A +A G + A+ ++G
Sbjct: 60 IERV---HSSEYIDWIEEFCADGGGRIEDTTTGLNEATFDTARVAAGAAIGAVHDSMEGS 116
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEG 201
+ YAL RP GHHAQPT ADG+CFLNNA +A + A++ +V +ID DVH+GNGT E
Sbjct: 117 QDLPYALCRPSGHHAQPTCADGFCFLNNAAIAAEAAIDMSADRVAIIDWDVHHGNGTQEA 176
Query: 202 FYRSNKVLTISLHMNHGSWGPS-HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
FY + VL +S H +HGSW P HPQ G+++E+G G GYN+N+PLP GTGDRGY H
Sbjct: 177 FYDRDDVLFVSAHHDHGSWHPEYHPQEGSLEEVGTNRGEGYNVNVPLPPGTGDRGYNHLF 236
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
LV P + +F+P +I++ GQD+ A DPNGR +T G+R++G V++LAD+ + G+L
Sbjct: 237 DRLVDPIVSEFDPTVIIVSAGQDAGAADPNGRNLVTRGGFRQLGSRVKTLADQTADGQLA 296
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLPLAL----LSDPIAYYPEDEAFPVKVIES 371
++QEGGY ++ ++ EG+L+ + L + DP + E P +++S
Sbjct: 297 LIQEGGYQPSHLSFATLGVFEGILDRRVDLEHFGMDDPFEWLDE----PTDLVDS 347
>gi|222475841|ref|YP_002564362.1| histone deacetylase superfamily [Halorubrum lacusprofundi ATCC
49239]
gi|222454212|gb|ACM58476.1| histone deacetylase superfamily [Halorubrum lacusprofundi ATCC
49239]
Length = 386
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 206/361 (57%), Gaps = 19/361 (5%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
I V+WDD ML+H+ KG F F P + V E HP+ +R++NI ++L
Sbjct: 5 ITVYWDDQMLDHEPPKGAFKFPFTP-IVAVPEVHPDRRERVQNIRAMLDHA-FGDIFETV 62
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTV-LNPGSWGAALLAVGTTLSAMK 135
S PA + H PDY++ LVE GG + D T LN ++ AA ++ G ++A
Sbjct: 63 SPDPASRKAIERVHDPDYLDWLVEFCADGGGRIEDTTTGLNEHTYDAARVSAGAAIAAAG 122
Query: 136 HVLDG-----HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG------CGK 184
LDG + YAL RP GHHAQP ADG+C+LNN LA + AL + +
Sbjct: 123 QALDGSKDDGQEALPYALCRPSGHHAQPDCADGFCYLNNVALAAEAALATDGPADITADR 182
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS-HPQNGTVDELGEGEGFGYNL 243
V +ID DVH+GNGT E FY + VL +S H +HGSW P HPQ G+++E GEG+G GY L
Sbjct: 183 VAIIDWDVHHGNGTQETFYDRDDVLFVSAHNDHGSWHPEYHPQEGSIEEFGEGDGEGYTL 242
Query: 244 NIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
N+PLP GTG+RGY +V PAI F+P++I++ GQD+ D NGR +T +G+R+M
Sbjct: 243 NVPLPPGTGNRGYEAFFERIVNPAITGFDPDLILVSAGQDAGPSDMNGRNIVTREGFRKM 302
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLAL----LSDPIAYYP 359
G V+ LAD + G L ++QEGGY ++ ++ EGVL + L DP +
Sbjct: 303 GDRVQQLADETADGALALIQEGGYQPSHLSFATLGVFEGVLGRTVDLDGYGTGDPFEFLD 362
Query: 360 E 360
E
Sbjct: 363 E 363
>gi|429335609|ref|ZP_19216230.1| histone deacetylase family protein [Pseudomonas putida CSV86]
gi|428759678|gb|EKX81971.1| histone deacetylase family protein [Pseudomonas putida CSV86]
Length = 370
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 186/337 (55%), Gaps = 10/337 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + PA LL HTPDY+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTRRLQVRGAAPASEEDLLRVHTPDYLQRFRALSDAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+G A L+ G ++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GPHAPIGPGSYGIARLSAGLAMAAVDAVLAGEVDNAYSLSRPPGHHCLADGAMGFCFLAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A+++A G GKV VID DVH+GNGT F VL+ISLH + G + +
Sbjct: 159 IAVAIEVAKARRGLGKVAVIDWDVHHGNGTQSIFEERGDVLSISLHQD-GCFPAGYSGE- 216
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+NIPLP G+G Y+HAM +VVPA+++FEP +I++ G D++A D
Sbjct: 217 --DERGRGAGLGANINIPLPPGSGHAAYIHAMERIVVPALERFEPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +REM R+VR A+R GRL++V EGGY Y +C AT+E + +
Sbjct: 275 PLARMLLHSDSFREMTRLVREAAERLCQGRLVLVHEGGYSEAYVPFCGLATIEELAGVRT 334
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKG 385
+ DP+ + + + + +E++ +Q + L G
Sbjct: 335 G-VDDPMLEFVQLQ----QPVETVAAFQRQWVEGLAG 366
>gi|221633525|ref|YP_002522750.1| hdac6 protein [Thermomicrobium roseum DSM 5159]
gi|221155670|gb|ACM04797.1| hdac6 protein [Thermomicrobium roseum DSM 5159]
Length = 368
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 183/324 (56%), Gaps = 6/324 (1%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+D+ L HDTG D L+ +E HP ++ I+ ++ + + P
Sbjct: 7 YDERFLQHDTGLDAHHLP-DGSILDPVE-HPSSARIIRRTAQLIAASGLLEGALVVAARP 64
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A +L ++HTP+YI + + K+GG + T + PGSW AALLA G + VL G
Sbjct: 65 ATEDELTAYHTPEYIAHVQQVTKSGGGWLDPETPVVPGSWEAALLAAGAAIELTDVVLAG 124
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAE 200
A+ L+RPPGHHA G+C NN LA + A G +++V+D DVH+GNGT
Sbjct: 125 RASCAFGLLRPPGHHAMRDQGMGFCVFNNVVLATRHAQRRGVQRIMVLDWDVHHGNGTQA 184
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
F+ VL +SLH + +W P G VD++G + G +NIPLP GTG+RGY+ A+
Sbjct: 185 AFWDDPSVLFVSLHQD--NWYPE--GWGAVDQIGGPDSEGTTVNIPLPPGTGNRGYLAAL 240
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+VVP ++F P MI + GQD+S DP GR +TM GYR M R+VR LAD GRL+
Sbjct: 241 ERIVVPIARQFRPEMIFVSAGQDASMEDPLGRMLVTMRGYRAMARLVRDLADELCAGRLV 300
Query: 321 IVQEGGYHVTYSAYCLHATLEGVL 344
++ EGGY + Y +C A +EG++
Sbjct: 301 VLMEGGYSLRYVPFCTLAVIEGMI 324
>gi|289579780|ref|YP_003478246.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|448281022|ref|ZP_21472331.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|289529333|gb|ADD03684.1| Histone deacetylase [Natrialba magadii ATCC 43099]
gi|445580058|gb|ELY34449.1| histone deacetylase [Natrialba magadii ATCC 43099]
Length = 378
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 201/374 (53%), Gaps = 12/374 (3%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
++V+W +H G F P FL E HP+ +R KNI I++ +
Sbjct: 7 LSVYWHPRTFDHAPPDGAFKLPSMP-FLASDEPHPDQPERAKNIKRIIESTFGDAVFT-- 63
Query: 77 SGIPAQIPQLLSFHTPDYINELVE-ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
+ PA + H +Y++ L + A+ GG + T ++ ++ AA A G L+A
Sbjct: 64 TADPAPEDAIERVHDSEYVSWLKKFAEDGGGYIDGTTTAMSDATFEAAQHATGAALAATD 123
Query: 136 HVLDGHGK-IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS--GCGKVVVIDIDV 192
L + + YAL RP GHHAQ ADG+CFLN+A +A Q AL++ +V ++D DV
Sbjct: 124 DALAADSQTVPYALARPSGHHAQSDRADGFCFLNHAAIAAQHALDTDPAVDRVAIVDWDV 183
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPS-HPQNGTVDELGEGEGFGYNLNIPLPNGT 251
H+GNGT E F + VL +S+H +HG+W P+ HPQ G ++E+G G+G GY +N P+P GT
Sbjct: 184 HHGNGTQEIFEDRDDVLFLSIHNDHGAWDPTYHPQTGGLEEVGVGDGEGYTVNAPVPPGT 243
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
GD GY LV P + +++P+++V GQD DP GR ++ DG+R +G LA
Sbjct: 244 GDEGYERVFDRLVEPIVSEYDPDLLVYSAGQDPGPSDPLGRNLISRDGFRMLGSRAAELA 303
Query: 312 DRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL----NLPLALLSDPIAYYPEDEAFPVK 367
+ G LI+QEGGY +++ A+ LEG +LP DP A+ E+ V
Sbjct: 304 STVTDGHYLILQEGGYQISHLAFATLGVLEGATGETHDLPEYGEGDPYAWLDENTEPLVD 363
Query: 368 VIESIKQYQNDVIP 381
+E I++ + P
Sbjct: 364 ALEEIREAHGEYWP 377
>gi|399908199|ref|ZP_10776751.1| acetylpolyamine aminohydrolase [Halomonas sp. KM-1]
Length = 370
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 167/296 (56%), Gaps = 8/296 (2%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L + PE+ R K+++ I ++ + + A LL H +Y+ AGG
Sbjct: 39 LAESPESKRRFKSLMDI---SGLTRALDLRTAPMASEEDLLRIHPAEYLARFKALSDAGG 95
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ D + PGS+ A ++ G + A+ VL G AY+L RPPGHH P A G+C
Sbjct: 96 GELGDHAPIGPGSYEIARVSAGLAIEAVATVLRGEADNAYSLSRPPGHHCLPDRAMGFCM 155
Query: 167 LNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A SG +V VID DVH+GNGT +Y+ + VLTISLH G + P +
Sbjct: 156 LANIPIAIEAARARSGLSRVAVIDWDVHHGNGTQHVYYQRDDVLTISLH-QEGCFPPGY- 213
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G D+ G G G GYNLNIPL G G+ Y HAM LVVPA+++F P +I++ G D++
Sbjct: 214 --GGADDRGSGTGLGYNLNIPLLPGGGEDAYQHAMQRLVVPALERFAPELIIVACGFDAN 271
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
FDP R LT + YREM R +R A+R GRL++V EGGY Y +C HA +E
Sbjct: 272 GFDPLARMLLTSECYREMTRTLRQAAERLCDGRLVMVHEGGYSEAYVPFCGHAVVE 327
>gi|448352501|ref|ZP_21541285.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
gi|445642700|gb|ELY95764.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
Length = 378
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 195/367 (53%), Gaps = 12/367 (3%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
++V+W +H G F P FL E HP+ +R KNI I+ +
Sbjct: 7 LSVYWHPRTFDHAPPDGAFKLPSMP-FLASDEPHPDQPERAKNIRKIIASTFGDGVFT-- 63
Query: 77 SGIPAQIPQLLSFHTPDYINELVE-ADKAGGKMVCDGTVLNPGSW-GAALLAVGTTLSAM 134
+ PA + H P+Y++ L AD GG + T +N ++ A A +
Sbjct: 64 TADPAPEDAIERVHDPEYVSWLKAFADDGGGYIDGTTTAMNDATFEAAQHAAGAALAATD 123
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN--SGCGKVVVIDIDV 192
+ + + YAL RP GHHAQ ADG+CFLN+A +A Q AL+ S +V ++D DV
Sbjct: 124 DALAEDSQSVPYALARPSGHHAQSDRADGFCFLNHAAIAAQHALDTDSAVDRVAIVDWDV 183
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPS-HPQNGTVDELGEGEGFGYNLNIPLPNGT 251
H+GNGT E F + VL +S+H +HG+W P+ HPQ G ++E+G G+G GY +N P+P GT
Sbjct: 184 HHGNGTQEIFEDRDDVLFLSIHNDHGAWDPTYHPQTGGLEEVGVGDGEGYTVNAPVPPGT 243
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
GD GY LV P + +++P++++ GQD DP GR ++ DG+R +G LA
Sbjct: 244 GDEGYERVFDRLVDPIVTEYDPDLLIYSAGQDPGPSDPLGRNLVSRDGFRMLGSRAAELA 303
Query: 312 DRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL----NLPLALLSDPIAYYPEDEAFPVK 367
+ G+ LI+QEGGY +++ A+ LEG +LP DP A+ ED V
Sbjct: 304 STVTDGQYLILQEGGYQISHLAFATLGVLEGATGETHDLPEYGEGDPYAWLDEDTGPLVD 363
Query: 368 VIESIKQ 374
+E I++
Sbjct: 364 ALEKIRE 370
>gi|298251905|ref|ZP_06975708.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
gi|297546497|gb|EFH80365.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
Length = 378
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 203/373 (54%), Gaps = 13/373 (3%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ +D L HDTG + F E HP ++ + I L +S + +
Sbjct: 7 LVFDTRFLAHDTGTESVVHLREGSFELSPEPHPSSAFITRRIKEFLDGSGLSAQMHPITV 66
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGK------MVCDGTVLNPGSWGAALLAVGTTLS 132
PA +L +FHTP+YI E + A GG V + T+L+PGS+ AAL A G L+
Sbjct: 67 RPATREELTAFHTPEYI-EGIRAFSQGGPDHGPWGEVDEETMLSPGSFEAALYAAGGALN 125
Query: 133 AMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDID 191
A++ V+DG + Y L+RPP HHA A G+C NN LA A N G +++++D D
Sbjct: 126 AVQAVMDGTVRNCYGLLRPPCHHATSNKALGFCVFNNTALAAYYARNVFGLKRILIVDWD 185
Query: 192 VHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT 251
H+GNGT E FY VL +S+H +W P +GT++++G G G GY +NIPLP GT
Sbjct: 186 AHHGNGTQEAFYDDPGVLFLSMHQQ--NWFPK--DSGTLEQVGRGAGVGYTVNIPLPPGT 241
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
GDRGY +LVVP ++F+P +I++ GQD+S DP ++MDG+R + + + LA
Sbjct: 242 GDRGYRELFEQLVVPIGRQFQPELILVTAGQDASWLDPLTTLMMSMDGFRAISQSLVDLA 301
Query: 312 DRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIES 371
+ GGRL+++Q GGY Y YC A LE +L + L ++ D A PE E +
Sbjct: 302 EEVCGGRLVMLQAGGYSSAYVPYCTAAALEPLLGVDLGIV-DLYAGAPELEECQHSFSQE 360
Query: 372 IKQYQNDVIPFLK 384
++ N + + +
Sbjct: 361 TREALNAALAWHR 373
>gi|448746452|ref|ZP_21728119.1| Histone deacetylase superfamily [Halomonas titanicae BH1]
gi|445565790|gb|ELY21898.1| Histone deacetylase superfamily [Halomonas titanicae BH1]
Length = 368
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 184/337 (54%), Gaps = 17/337 (5%)
Query: 20 FWDDGMLNHDTGK-GLFDTGFDPG-FLE--VLEKHPENSDRIKNIVSILKRGPISPYISW 75
+W + HD G G+F PG FL+ + PE+ R+KNI+ + G I +S
Sbjct: 7 YWHERCFWHDLGAIGVFSA---PGEFLQPQTASESPESKRRLKNILEV--SGLIDE-LSV 60
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
A + LL FHTP Y++EL DKA G D PGSW AA + G ++A++
Sbjct: 61 VKPPAAAMEDLLRFHTPRYLDELQTGDKARGGNGGDCAPYMPGSWAAATQSAGLAIAAVE 120
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
V G AYAL RPPGHHA+ + G+C L N +AV A G +V ++D DVH+
Sbjct: 121 DVALGEVSNAYALCRPPGHHAEADLGRGFCLLGNIPVAVMRARALGQVNRVAILDWDVHH 180
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GNG FY VLT+SLH ++P + G+ DE GEG G G NLN+PLP G G
Sbjct: 181 GNGQQAAFYGEPDVLTVSLHQ-----AANYPLETGSFDEQGEGAGLGANLNLPLPPGCGL 235
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y +AM +LV+PA++ F+P +IV+ G D+ A DP G+ L + M +++LA+R
Sbjct: 236 GAYAYAMEKLVLPALEAFKPELIVVACGYDACAKDPLGKMLLNSQAFATMTAQLKALAER 295
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLAL 350
G+L+ + EGGY Y C HA ++ + +A+
Sbjct: 296 CCEGKLVFIHEGGYSEGYVPLCGHAVIQTLAGSAIAV 332
>gi|448240336|ref|YP_007404389.1| histone deacetylase superfamily protein [Serratia marcescens WW4]
gi|445210700|gb|AGE16370.1| histone deacetylase superfamily protein [Serratia marcescens WW4]
Length = 370
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 172/294 (58%), Gaps = 8/294 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + +S ++ S PA LL H Y+ + +GG +
Sbjct: 41 ESPETKRRMKNLMDV---SGLSRQLTLLSAEPATEEDLLRIHPAHYLQRFKQVSDSGGGL 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + L PGS+ A L+ G +A++ VL G AYAL RPPGHH P + G+CFL
Sbjct: 98 LGEEAQLGPGSYEIAKLSAGLACAAVEAVLQGELDNAYALSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A++ A G GKV V+D DVH+GNGT +++ VLT+SLH + G + + +
Sbjct: 158 NIPIAIERAKARYGLGKVAVLDWDVHHGNGTQHIYWQRGDVLTLSLHQD-GCFPAGY--S 214
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G D GEG G G N+N+P+ G GD GY+HAM +++P+++KFEP +I++ G D++A
Sbjct: 215 GEQDR-GEGAGAGCNVNVPMLAGAGDDGYLHAMRRIIIPSLEKFEPELIIVACGYDANAL 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L D +R M +V+ ADR GG+L++V EGGY +Y +C A +E
Sbjct: 274 DPLARMQLHSDSFRAMTALVQDAADRLCGGKLVMVHEGGYAESYVPFCGLAVME 327
>gi|152969101|ref|YP_001334210.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150953950|gb|ABR75980.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 371
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 183/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 333
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q + I L
Sbjct: 334 TE-VQDPLLEFIQQQ----QPRAAFAQFQREAIDRL 364
>gi|254441411|ref|ZP_05054904.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
gi|198251489|gb|EDY75804.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
Length = 366
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 186/354 (52%), Gaps = 20/354 (5%)
Query: 20 FWDDGMLNHDTGK--GLFDTG--FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
FWD+ H G G+ G P L + PE+ R+KN++ + +S +
Sbjct: 6 FWDERCFWHGGGNYAGMLPVGGLVQPMVGGGLPESPESKRRLKNLMDVTG---LSGELDL 62
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
S A LL H Y++ A GG + T PG + A L+ G +++A++
Sbjct: 63 RSASEASRIDLLRVHPASYLDTFKAASDTGGGELGRRTPFGPGGYEMAALSAGLSIAALQ 122
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHY 194
VL G AYAL RPPGHH P +G+C N LA+Q A N +VVV+D DVH+
Sbjct: 123 AVLKGDVTNAYALSRPPGHHCLPDYPNGFCLFANLALAIQSARANDLTQRVVVLDWDVHH 182
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGD 253
GNGT FY VLTIS+H + ++P + G + G G+G G+NLNIPLP GTG
Sbjct: 183 GNGTEAIFYEDPDVLTISMHQDR-----NYPMDTGDFTDRGRGKGAGFNLNIPLPPGTGH 237
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
GY+ M ++V+P IQ F+P++IV+ G D++A DP GR T + ++ M + V+SLA
Sbjct: 238 IGYLSTMEQIVIPQIQAFKPDVIVIACGYDAAAIDPLGRMLATAETFQIMTQQVKSLAQD 297
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVK 367
GRL++ EGGY Y +C H + + SD +A P E FP++
Sbjct: 298 LCNGRLMMAHEGGYSKVYVPFCGHHVIAEMAG------SDIVAPDPFGEVFPLR 345
>gi|453064865|gb|EMF05829.1| histone deacetylase superfamily protein [Serratia marcescens
VGH107]
Length = 370
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 172/294 (58%), Gaps = 8/294 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + +S ++ S PA LL H Y+ + +GG +
Sbjct: 41 ESPETKRRMKNLMDV---SGLSRQLTLLSAEPATEEDLLRIHPAHYLQRFKQVSDSGGGL 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + L PGS+ A L+ G +A++ VL G AYAL RPPGHH P + G+CFL
Sbjct: 98 LGEEAPLGPGSYEIAKLSAGLACAAVEAVLQGGLDNAYALSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A++ A G GKV V+D DVH+GNGT +++ VLT+SLH + G + + +
Sbjct: 158 NIPIAIERAKARYGLGKVAVLDWDVHHGNGTQHIYWQRGDVLTLSLHQD-GCFPAGY--S 214
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G D GEG G G N+N+P+ G GD GY+HAM +++PA++KFEP +I++ G D++A
Sbjct: 215 GEQDR-GEGAGAGCNVNVPMLAGAGDDGYLHAMRRIIIPALEKFEPELIIVACGYDANAL 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L D +R M +V+ ADR GG+L++V EGGY +Y +C A +E
Sbjct: 274 DPLARMQLHSDSFRAMTALVQDAADRLCGGKLVMVHEGGYAESYVPFCGLAVME 327
>gi|330002008|ref|ZP_08304146.1| histone deacetylase-like amidohydrolase, partial [Klebsiella sp. MS
92-3]
gi|328537501|gb|EGF63732.1| histone deacetylase-like amidohydrolase [Klebsiella sp. MS 92-3]
Length = 338
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 8 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 64
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 65 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 124
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 125 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 183
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 184 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 240
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 241 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 300
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 301 TE-VQDPLLEFIQQQ----QPRAAFAQFQRQAIDRL 331
>gi|386033664|ref|YP_005953577.1| putative deacetylase [Klebsiella pneumoniae KCTC 2242]
gi|424829463|ref|ZP_18254191.1| histone deacetylase family protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425080349|ref|ZP_18483446.1| hypothetical protein HMPREF1306_01078 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428937532|ref|ZP_19010789.1| putative deacetylase [Klebsiella pneumoniae JHCK1]
gi|339760792|gb|AEJ97012.1| putative deacetylase [Klebsiella pneumoniae KCTC 2242]
gi|405606463|gb|EKB79453.1| hypothetical protein HMPREF1306_01078 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|414706885|emb|CCN28589.1| histone deacetylase family protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426296059|gb|EKV58772.1| putative deacetylase [Klebsiella pneumoniae JHCK1]
Length = 371
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 333
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 334 TE-VQDPLLEFIQQQ----QPRATFAQFQRQAIDRL 364
>gi|421911408|ref|ZP_16341169.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410114661|emb|CCM83794.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
Length = 373
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 43 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 99
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 100 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 159
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 160 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 218
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 219 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 275
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 276 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 335
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 336 TE-VQDPLLEFIQQQ----QPRATFAQFQRQAIDRL 366
>gi|378977508|ref|YP_005225649.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419975065|ref|ZP_14490479.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981011|ref|ZP_14496291.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419987489|ref|ZP_14502608.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419994084|ref|ZP_14509006.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998063|ref|ZP_14512854.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420005097|ref|ZP_14519725.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009787|ref|ZP_14524267.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016025|ref|ZP_14530321.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021309|ref|ZP_14535490.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420026832|ref|ZP_14540831.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033808|ref|ZP_14547607.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038943|ref|ZP_14552584.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420045417|ref|ZP_14558885.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050264|ref|ZP_14563565.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056908|ref|ZP_14570058.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420062483|ref|ZP_14575454.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067289|ref|ZP_14580083.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072395|ref|ZP_14585033.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420079655|ref|ZP_14592097.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083958|ref|ZP_14596228.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|424934615|ref|ZP_18352987.1| Putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|428152297|ref|ZP_18999976.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428940668|ref|ZP_19013744.1| putative deacetylase [Klebsiella pneumoniae VA360]
gi|364516919|gb|AEW60047.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397344167|gb|EJJ37304.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397344324|gb|EJJ37459.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397344539|gb|EJJ37672.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397357027|gb|EJJ49808.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397361346|gb|EJJ54010.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397363193|gb|EJJ55835.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397375605|gb|EJJ67890.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397380494|gb|EJJ72676.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397386898|gb|EJJ78955.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397394050|gb|EJJ85790.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397394497|gb|EJJ86224.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397403687|gb|EJJ95238.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397409798|gb|EJK01100.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397411537|gb|EJK02791.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397420120|gb|EJK11216.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427964|gb|EJK18718.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397428362|gb|EJK19104.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397439137|gb|EJK29596.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397443490|gb|EJK33807.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450658|gb|EJK40758.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|407808802|gb|EKF80053.1| Putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|426301891|gb|EKV64114.1| putative deacetylase [Klebsiella pneumoniae VA360]
gi|427537743|emb|CCM96114.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 371
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 333
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 334 TE-VQDPLLEFIQQQ----QPRATFAQFQRQAIDRL 364
>gi|421915312|ref|ZP_16344922.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|410122398|emb|CCM87547.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
Length = 349
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 19 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 75
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 76 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 135
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 136 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 194
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 195 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 251
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 252 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 311
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 312 TE-VQDPLLEFIQQQ----QPRATFAQFQRQAIDRL 342
>gi|206576080|ref|YP_002239856.1| histone deacetylase family protein [Klebsiella pneumoniae 342]
gi|206565138|gb|ACI06914.1| histone deacetylase family protein [Klebsiella pneumoniae 342]
Length = 371
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKTISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL+G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLEGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMETLSGIR 333
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + Q+Q I L
Sbjct: 334 TE-VQDPLREFIQQQ----QPRAEFAQFQRQAIDRL 364
>gi|238893553|ref|YP_002918287.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402781952|ref|YP_006637498.1| deacetylase [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|425077820|ref|ZP_18480923.1| hypothetical protein HMPREF1305_03750 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425088453|ref|ZP_18491546.1| hypothetical protein HMPREF1307_03918 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090410|ref|ZP_18493495.1| hypothetical protein HMPREF1308_00655 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|238545869|dbj|BAH62220.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402542820|gb|AFQ66969.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405590799|gb|EKB64312.1| hypothetical protein HMPREF1305_03750 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601545|gb|EKB74698.1| hypothetical protein HMPREF1307_03918 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405614094|gb|EKB86815.1| hypothetical protein HMPREF1308_00655 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 371
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 333
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 334 TE-VQDPLLEFIQQQ----QPRAAFAQFQRQAIDRL 364
>gi|419762227|ref|ZP_14288475.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
gi|397744858|gb|EJK92068.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
Length = 387
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 183/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 57 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 113
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 114 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 173
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 174 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 232
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 233 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 289
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E L+
Sbjct: 290 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVME-TLSGV 348
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q + I L
Sbjct: 349 RTEVQDPLLEFIQQQ----QPRAAFAQFQREAIDRL 380
>gi|296387713|ref|ZP_06877188.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PAb1]
gi|416875257|ref|ZP_11918601.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa 152504]
gi|334842226|gb|EGM20838.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa 152504]
Length = 380
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 174/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P + G
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---G 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M +VR A+R++GGRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|288936697|ref|YP_003440756.1| histone deacetylase [Klebsiella variicola At-22]
gi|288891406|gb|ADC59724.1| Histone deacetylase [Klebsiella variicola At-22]
Length = 371
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 167/294 (56%), Gaps = 8/294 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKTISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL+G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLEGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVME 327
>gi|449050902|ref|ZP_21731789.1| putative deacetylase [Klebsiella pneumoniae hvKP1]
gi|448876431|gb|EMB11422.1| putative deacetylase [Klebsiella pneumoniae hvKP1]
Length = 371
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALVRFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 333
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 334 TE-VQDPLLEFIQQQ----QPRATFAQFQRQAIDRL 364
>gi|290510247|ref|ZP_06549617.1| histone deacetylase [Klebsiella sp. 1_1_55]
gi|289776963|gb|EFD84961.1| histone deacetylase [Klebsiella sp. 1_1_55]
Length = 371
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 175/315 (55%), Gaps = 9/315 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMETLSGIR 333
Query: 348 LALLSDPIAYYPEDE 362
+ DP+ + + +
Sbjct: 334 TE-VQDPLREFIQQQ 347
>gi|157368861|ref|YP_001476850.1| histone deacetylase superfamily protein [Serratia proteamaculans
568]
gi|157320625|gb|ABV39722.1| histone deacetylase superfamily [Serratia proteamaculans 568]
Length = 370
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 189/334 (56%), Gaps = 13/334 (3%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE R+KN++ + +S +S S A LL H +Y+ + GG M+
Sbjct: 43 PETKRRMKNLMDV---SGLSHQLSLLSAELATDEDLLRIHPANYLQRFKQLSDNGGGMLG 99
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
+ L PGS+ A L+ G +A++ VL G + AYAL RPPGHH P + G+CFL N
Sbjct: 100 EEAPLGPGSYEIAKLSAGLACAAVEAVLQGELENAYALSRPPGHHCLPDQSMGFCFLANI 159
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+A++ A G GKV V+D DVH+GNGT +++ + VLT+SLH + G + + +G
Sbjct: 160 PIAIERAKAKYGLGKVAVLDWDVHHGNGTQHIYWQRDDVLTLSLHQD-GCFPAGY--SGE 216
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
D G G G GYN+NIPL G GD GY++AM ++V+PA+++F+P +I++ G D++A DP
Sbjct: 217 QDR-GAGAGEGYNVNIPLLAGAGDDGYLYAMRQIVIPALKQFQPELIIVACGYDANALDP 275
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
R L D +R M +V+ ADR G+L++V EGGY +Y +C A +E + +
Sbjct: 276 LARMQLHSDSFRSMTALVQDAADRLCNGKLVMVHEGGYAESYVPFCGLAVMEQLSGIRTE 335
Query: 350 LLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + ++ Q+Q I L
Sbjct: 336 -VQDPLLAFIQQQ----QPRDAFNQFQRQAIDRL 364
>gi|395497462|ref|ZP_10429041.1| histone deacetylase family protein [Pseudomonas sp. PAMC 25886]
Length = 370
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 174/310 (56%), Gaps = 6/310 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L +S ++ HS PA L H DY+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLSRHLQQHSAAPATEEDLQRVHGADYLQRFKALSDAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G T++A+ VL GH AY+L RPPGHH A G+CFL N
Sbjct: 99 GPQAPIGPGSYEIAKLSAGLTIAAVDAVLSGHVGNAYSLSRPPGHHCLADGAMGFCFLAN 158
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G GKV VID DVH+GNGT F VLTISLH + G + P + +G
Sbjct: 159 IAIAIEAAKARRGLGKVAVIDWDVHHGNGTQSIFEARGDVLTISLHQD-GCYPPGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G N+NIPLP G+G Y+HAM +VVPA+++FEP +I++ G D++A D
Sbjct: 216 EQDR-GHGAGLGANINIPLPPGSGHAAYLHAMERIVVPALERFEPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R M R VR A+R GRL++V EGGY Y +C A LE + +
Sbjct: 275 PLARMLLHSESFRLMTRTVREAAERLCQGRLVLVHEGGYSEAYVPFCGLAALEELAGVRT 334
Query: 349 ALLSDPIAYY 358
A + DP+ +
Sbjct: 335 A-VEDPMLEF 343
>gi|355639775|ref|ZP_09051361.1| hypothetical protein HMPREF1030_00447 [Pseudomonas sp. 2_1_26]
gi|354831710|gb|EHF15718.1| hypothetical protein HMPREF1030_00447 [Pseudomonas sp. 2_1_26]
Length = 380
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 174/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ ++ S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTAHLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P +
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M +VR A+R++GGRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|254236679|ref|ZP_04930002.1| hypothetical protein PACG_02687 [Pseudomonas aeruginosa C3719]
gi|126168610|gb|EAZ54121.1| hypothetical protein PACG_02687 [Pseudomonas aeruginosa C3719]
Length = 380
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 174/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLAGEVDNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P + G
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---G 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M +VR A+R++GGRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|218889942|ref|YP_002438806.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
LESB58]
gi|254242464|ref|ZP_04935786.1| hypothetical protein PA2G_03214 [Pseudomonas aeruginosa 2192]
gi|416863844|ref|ZP_11915369.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
138244]
gi|421152414|ref|ZP_15611994.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 14886]
gi|126195842|gb|EAZ59905.1| hypothetical protein PA2G_03214 [Pseudomonas aeruginosa 2192]
gi|218770165|emb|CAW25927.1| probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
LESB58]
gi|334835228|gb|EGM14119.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
138244]
gi|404525174|gb|EKA35450.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 14886]
gi|453043547|gb|EME91277.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PA21_ST175]
Length = 380
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 173/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLAGQADNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P +
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M +VR A+R++GGRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|421781488|ref|ZP_16217954.1| histone deacetylase-like amidohydrolase [Serratia plymuthica A30]
gi|407756392|gb|EKF66509.1| histone deacetylase-like amidohydrolase [Serratia plymuthica A30]
Length = 370
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 171/294 (58%), Gaps = 8/294 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + +S + S A LL H DY+ + GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLSRRLRLLSAELATDEDLLRIHPADYLQRFKQLSDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + L PGS+ A L+ G +A+K VL AYAL RPPGHH P + G+CFL
Sbjct: 98 LGEEAPLGPGSYEIAKLSAGLACAAVKAVLQAELDNAYALSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A++ A G GKV V+D DVH+GNGT +++ + VLT+SLH + G + + +
Sbjct: 158 NIPIAIERAKAQYGLGKVAVLDWDVHHGNGTQHIYWQRDDVLTLSLHQD-GCFPAGY--S 214
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G D G G G G+N+N+PL G GD GY++AM ++V+PA+++F+P +I++ G D++A
Sbjct: 215 GEQDR-GAGAGEGFNINVPLLAGAGDDGYLYAMRQIVIPALERFKPELIIVACGYDANAI 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L D +R M +V+ ADR GG+L++V EGGY +Y +C A +E
Sbjct: 274 DPLARMQLHSDSFRSMTALVQDAADRLCGGKLVMVHEGGYAESYVPFCGLAVME 327
>gi|402298501|ref|ZP_10818189.1| histone deacetylase superfamily protein [Bacillus alcalophilus ATCC
27647]
gi|401726319|gb|EJS99556.1| histone deacetylase superfamily protein [Bacillus alcalophilus ATCC
27647]
Length = 369
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 188/365 (51%), Gaps = 15/365 (4%)
Query: 22 DDGMLNHDTGKG-LFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
D+ HDTG G LF PG + H EN + ++L+R + + + P
Sbjct: 8 DESYFWHDTGNGALF---LSPGGWVESDIHSENPATKRRFKNLLERSGLLKQMKSIAPRP 64
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A ++ FHT + I + E GG ++ PGS+ ALL+ G L+ + V++G
Sbjct: 65 ATEEEVALFHTKELIQKTKEVSDNGGGETGPLAIVGPGSYEIALLSAGGALTGVDAVMNG 124
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTA 199
K YAL RPPGHHA+ G+C NN +A + A G +V+V+D DVH+GNGT
Sbjct: 125 DVKNVYALTRPPGHHAEAHEGSGFCLFNNVAIAGKYAKAKYGLKRVLVLDWDVHHGNGTE 184
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHA 259
FY N+VL ISLH + + P+ G + +G+ GY +NIPLP GTG+ GY++A
Sbjct: 185 SAFYEDNEVLFISLHQDR--YYPA--DRGFAEHVGKNGAEGYTVNIPLPAGTGNAGYMYA 240
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
E+V P + +F+P +I++ GQD S FDP R +T DG+ + + LA + G+L
Sbjct: 241 FKEIVAPIVNEFKPELIIVSAGQDPSLFDPLARMMVTRDGFYQFAETMNELAKNHCDGKL 300
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDV 379
++ EGGY Y +C A +E + + + DP A AFP + Q +
Sbjct: 301 VLCHEGGYSGAYVPFCSLAIVESISGISTN-IEDPFA-----PAFPGLPTNELLTSQKEA 354
Query: 380 IPFLK 384
+ +K
Sbjct: 355 VDHVK 359
>gi|15598969|ref|NP_252463.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa PAO1]
gi|386057232|ref|YP_005973754.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
M18]
gi|392982500|ref|YP_006481087.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa DK2]
gi|418585988|ref|ZP_13150034.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589865|ref|ZP_13153784.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa MPAO1/P2]
gi|419757127|ref|ZP_14283472.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa PADK2_CF510]
gi|421518318|ref|ZP_15964992.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PAO579]
gi|424939360|ref|ZP_18355123.1| probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
NCMG1179]
gi|9949945|gb|AAG07161.1|AE004796_6 probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PAO1]
gi|346055806|dbj|GAA15689.1| probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
NCMG1179]
gi|347303538|gb|AEO73652.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
M18]
gi|375043662|gb|EHS36278.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051401|gb|EHS43870.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa MPAO1/P2]
gi|384396882|gb|EIE43300.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318005|gb|AFM63385.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa DK2]
gi|404347800|gb|EJZ74149.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PAO579]
Length = 380
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 173/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P +
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M +VR A+R++GGRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|381211229|ref|ZP_09918300.1| histone deacetylase superfamily protein [Lentibacillus sp. Grbi]
Length = 368
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 187/363 (51%), Gaps = 17/363 (4%)
Query: 22 DDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPA 81
D+ H TG G + G + H EN + + + ++L+R + S A
Sbjct: 10 DESYFWHQTGNGALN--IQSGGWVQADTHAENPESKRRVKNLLERSRFMDELQQISPREA 67
Query: 82 QIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
++L H+ +YIN++ E AGG ++ P S+ AL + G ++++ V++
Sbjct: 68 TRQEILINHSKEYINKIKELSDAGGGDAGVHAIVGPDSYEIALKSAGGVMTSVDAVMEEE 127
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ AYALVRPPGHHA+P G+C NN +A + A G ++ ++D DVH+GNGT
Sbjct: 128 VQNAYALVRPPGHHAEPAEGMGFCLFNNVAIAAKYAREKYGLKRIAILDWDVHHGNGTET 187
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHA 259
F + VL IS+H + P++ G + G+G+G GY +NI LP GTGD GY +A
Sbjct: 188 AFENDSDVLFISVHQEN-----IFPKDRGAITYTGKGDGEGYTVNIELPAGTGDEGYFYA 242
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+L+ P ++ P +I + GQD+S FDP GR +T +GY +M + ++ LA+++S R+
Sbjct: 243 FDQLIAPVFDQYAPELIFISAGQDASRFDPIGRMSVTAEGYFQMSKRIKKLAEKHSSNRI 302
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAY-------YPEDEAFPVKVIESI 372
+ EGGY Y +C +E L + + DP YP + + IE
Sbjct: 303 IACHEGGYSTAYVPFCTLRVIE-ALKGKRSQVDDPFDQGFHEGPIYPHQKEAVQRAIEVQ 361
Query: 373 KQY 375
+ Y
Sbjct: 362 RAY 364
>gi|352106541|ref|ZP_08961484.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
gi|350597584|gb|EHA13712.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
Length = 368
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 183/337 (54%), Gaps = 17/337 (5%)
Query: 20 FWDDGMLNHDTGK-GLFDTGFDPG-FLE--VLEKHPENSDRIKNIVSILKRGPISPYISW 75
+W + HD G G+F PG FL+ + PE+ R+KNI+ + G I ++
Sbjct: 7 YWHERCFWHDQGAIGVFSA---PGEFLQPQSASESPESKRRLKNILEV--SGLIDE-LNV 60
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
AQ+ LL FHTP Y++EL DK G D PGSW AA + G ++A++
Sbjct: 61 VKPPAAQLTDLLRFHTPRYLDELQAGDKTRGGNGGDCAPYMPGSWAAATQSAGLAIAAVE 120
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
V G AYAL RPPGHHA+ G+C L N +AV A G +V ++D DVH+
Sbjct: 121 AVALGELSNAYALCRPPGHHAEADQGRGFCLLGNIPVAVMRARALGQVNRVAILDWDVHH 180
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GNG FY +V T+S+H ++P + G DE GEG G G NLN+PLP G G
Sbjct: 181 GNGQQAAFYTEPEVFTVSMHQ-----AANYPLETGGFDEQGEGAGLGANLNLPLPPGCGL 235
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y +AM +LV+PA++ F+P++IV+ G D+ A DP G+ L + M +++LA+R
Sbjct: 236 GAYAYAMEKLVLPALEGFKPDLIVVACGYDACAKDPLGKMLLNSQAFATMTAQLKALAER 295
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLAL 350
G+L+ + EGGY Y C HA ++ + +A+
Sbjct: 296 CCEGKLVFIHEGGYSEGYVPLCGHAVIQTLAGSQIAV 332
>gi|107103293|ref|ZP_01367211.1| hypothetical protein PaerPA_01004362 [Pseudomonas aeruginosa PACS2]
Length = 380
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 173/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLTGEADNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P + G
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---G 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M +VR A+R++ GRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMVRDAAERHADGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|389684461|ref|ZP_10175789.1| histone deacetylase family protein [Pseudomonas chlororaphis O6]
gi|388551684|gb|EIM14949.1| histone deacetylase family protein [Pseudomonas chlororaphis O6]
Length = 372
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 188/338 (55%), Gaps = 14/338 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S +PA LL H+ +Y+ +AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTRQLQVRSAMPASEEDLLRVHSTEYLQRFKALSEAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GPQAPIGPGSYEIARLSAGLAMAAVDAVLGGEADNAYSLSRPPGHHCLADGAMGFCFLAN 158
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G GKV VID DVH+GNGT F VLTISLH + G + P + +G
Sbjct: 159 IAIAIEAAKARRGLGKVAVIDWDVHHGNGTQSIFEERGDVLTISLHQD-GCFPPGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G NLNIPL G+G Y+HA+ +V+PA+++FEP +I++ G D++A D
Sbjct: 216 EQDR-GRGAGLGANLNIPLLPGSGHDAYLHALQRIVIPALERFEPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M R VR A+R GRL++V EGGY Y +C AT+E + +
Sbjct: 275 PLARMLLHSDSFRAMTRQVREAAERLCQGRLVLVHEGGYSEAYVPFCGLATVEELAGVRT 334
Query: 349 ALLSDPIAYY-------PEDEAFPVKVIESIKQ-YQND 378
A ++DP+ + P +AF ++I+ + Q + ND
Sbjct: 335 A-VTDPMLEFVQMQQPNPGFQAFQRQLIDDLAQTFLND 371
>gi|152986124|ref|YP_001346726.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PA7]
gi|150961282|gb|ABR83307.1| probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PA7]
Length = 380
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 173/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AYAL RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYALSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P +
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R + +VR A+R++GGRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRALTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|313109188|ref|ZP_07795157.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
39016]
gi|386067862|ref|YP_005983166.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
NCGM2.S1]
gi|310881659|gb|EFQ40253.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
39016]
gi|348036421|dbj|BAK91781.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
NCGM2.S1]
Length = 380
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 173/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P +
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M +VR A+R++GGRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMVRHAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|420138028|ref|ZP_14645970.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa CIG1]
gi|421158417|ref|ZP_15617675.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 25324]
gi|421165975|ref|ZP_15624253.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 700888]
gi|421179056|ref|ZP_15636653.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa E2]
gi|451985157|ref|ZP_21933386.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Pseudomonas aeruginosa 18A]
gi|403249177|gb|EJY62691.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa CIG1]
gi|404539478|gb|EKA48959.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 700888]
gi|404547574|gb|EKA56568.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa E2]
gi|404549658|gb|EKA58506.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 25324]
gi|451757204|emb|CCQ85909.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Pseudomonas aeruginosa 18A]
Length = 380
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 173/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P +
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M ++R A+R++GGRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMIRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|408481806|ref|ZP_11188025.1| histone deacetylase family protein [Pseudomonas sp. R81]
Length = 370
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 180/327 (55%), Gaps = 6/327 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L + ++ HS PA LL H +Y+ AGG +
Sbjct: 39 HAESPETKRRMKSLLDVSGLGHHLHMHSAAPASEADLLRVHGHEYLQRFKALSDAGGGDL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G T++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GLQAPIGPGSYEIARLSAGLTMAAVDAVLKGLADNAYSLSRPPGHHCLADSAMGFCFLAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A + +G GKV VID DVH+GNGT F VLTISLH + G + P +
Sbjct: 159 IAIAIEAAKVRNGLGKVAVIDWDVHHGNGTQSIFEARADVLTISLHQD-GCYPPGYSGE- 216
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
E G G G G N+NIPLP G+G Y+HAM +VVPA+++F+P +I++ G D++A D
Sbjct: 217 --QERGRGAGLGANINIPLPPGSGHDAYLHAMNRIVVPALERFQPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R M R VR A+R GRL++V EGGY Y +C ATLE + +
Sbjct: 275 PLARMLLHSESFRLMTRCVRQAAERLCQGRLVLVHEGGYSEAYVPFCGLATLEELSGVRT 334
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQY 375
A + DP+ E + ++ KQ+
Sbjct: 335 A-VDDPMLALVELQQPKAALLAFQKQW 360
>gi|254453823|ref|ZP_05067260.1| histone deacetylase family protein [Octadecabacter arcticus 238]
gi|198268229|gb|EDY92499.1| histone deacetylase family protein [Octadecabacter arcticus 238]
Length = 366
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 185/354 (52%), Gaps = 20/354 (5%)
Query: 20 FWDDGMLNHDTGK--GLFDTG--FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
FWD+ H G G+ G P L + PE+ R+ N++ + ++ +
Sbjct: 6 FWDEKCFWHGGGNYAGMLPVGGLVQPMVGGGLPESPESKRRLMNLMDVTG---LAGDLDM 62
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
A LL H Y++ AGG + T PG + A L+ G +++A++
Sbjct: 63 RHAPAATTEDLLRVHPASYLDTFKATSDAGGGELGRRTPFGPGGYEMAALSAGLSIAALQ 122
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHY 194
VL G AYAL RPPGHH P +G+C L N LA+Q A G +VVV+D DVH+
Sbjct: 123 AVLKGELTNAYALSRPPGHHCLPDFPNGFCLLANLALAIQSARAKGLAQRVVVLDWDVHH 182
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGD 253
GNGT FY VLTIS+H + ++P + G + G G+G G+NLNIPLP GTG
Sbjct: 183 GNGTEAIFYDDPDVLTISMHQDR-----NYPMDTGDFADRGRGKGAGFNLNIPLPPGTGH 237
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
GY+ M +V+P +Q F+P++IV+ G D++A DP GR T ++ M + V+SLA+
Sbjct: 238 IGYLSTMERIVIPQVQAFKPDVIVIACGYDAAAIDPLGRMLATAQTFQVMTQQVKSLAED 297
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVK 367
GGRL++ EGGY Y +C H + + S+ +A P + FP++
Sbjct: 298 LCGGRLMMAHEGGYSEVYVPFCGHHVIAEMAG------SNIVAPDPFGDVFPLR 345
>gi|443473756|ref|ZP_21063778.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
gi|442904630|gb|ELS29607.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
Length = 372
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 169/325 (52%), Gaps = 15/325 (4%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
WD+ + HDT + + E ++ HPE D + S++KR + ++
Sbjct: 9 IWDERFITHDT------RAWSLPWQEPID-HPEKGDTKRRFASLVKRSGLEQHLVPLPFS 61
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVL 138
PA LL HTP+Y++ ++ DG T + PGS A LA G +S V+
Sbjct: 62 PASEADLLRVHTPEYVDRILNPTGPAWSDAGDGETPVGPGSADVARLAAGAVISTFGAVV 121
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNG 197
G AYALVRPPGHHA GYC +N + ++ L +V VID DVH+GNG
Sbjct: 122 SGTVTNAYALVRPPGHHAIAGQGMGYCIFHNTAIGIRHLQQTGAVSRVAVIDWDVHHGNG 181
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
T FY VLTISLH + +P G V ++G G G G NLNIPLP G+G Y
Sbjct: 182 TETLFYDDPSVLTISLHQDD-----LYPIGRGKVQDVGTGPGVGANLNIPLPAGSGRGAY 236
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
V A +VVPAI++F P++IV+ G DS+A DP GRQ L + YRE+ +V LAD
Sbjct: 237 VAAFERVVVPAIRRFRPDLIVIASGFDSAAMDPFGRQLLHSEAYRELTTLVMDLADEVCK 296
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLE 341
R+ V EGGY +C A +E
Sbjct: 297 SRVAAVHEGGYDPLMGPFCGLAVVE 321
>gi|365138759|ref|ZP_09345372.1| hypothetical protein HMPREF1024_01403 [Klebsiella sp. 4_1_44FAA]
gi|363654729|gb|EHL93612.1| hypothetical protein HMPREF1024_01403 [Klebsiella sp. 4_1_44FAA]
Length = 370
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 180/333 (54%), Gaps = 15/333 (4%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P ++ S PA + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRVVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIR 333
Query: 348 LALLSDPIAYYPEDE------AFPVKVIESIKQ 374
+ DP+ + + + F + I+ + Q
Sbjct: 334 TE-VQDPLLEFIQQQPRAAFAQFQRQAIDRLAQ 365
>gi|269928981|ref|YP_003321302.1| Histone deacetylase [Sphaerobacter thermophilus DSM 20745]
gi|269788338|gb|ACZ40480.1| Histone deacetylase [Sphaerobacter thermophilus DSM 20745]
Length = 375
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 26 LNHDTGK-GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIP 84
L H+T L+ +G F+E ++ HP N + +L +S + PA
Sbjct: 15 LQHNTNPYRLWRSGNPLPFVEQVD-HPSNPRLAQRTKHLLDLAGLSRRMVRIEPYPATEE 73
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
+ ++HTP Y+ + E AGG +G P S+ ALLA G ++A+ V+ G +
Sbjct: 74 DVTAYHTPAYVQRVREICAAGGGDTGEGAPAAPDSYEIALLAAGGVMAAVDAVMTGQVRQ 133
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFY 203
ALVRPPGHHA G+C N +A A G +++++D DVH+GNGT + FY
Sbjct: 134 CLALVRPPGHHAMADRGMGFCIFGNVAIAAHHARRRHGVERILIVDWDVHHGNGTQDAFY 193
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
VL +S+H + G P G V++ G G G GY +NIPLP G+GD Y+ A T +
Sbjct: 194 ADPGVLFVSIHQD----GLYPPGWGAVEDTGTGPGAGYTVNIPLPPGSGDAAYLAAFTRV 249
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
+ P +F P ++++ GQD+SA DP GR CL+ + YR M ++R +A + GRL++
Sbjct: 250 IAPIAARFRPELVIVSAGQDASASDPLGRMCLSTEAYRRMTAVMRDIAASSADGRLVVAL 309
Query: 324 EGGYHVTYSAYCLHATLEGVL 344
EGGY Y+ YC A E +L
Sbjct: 310 EGGYSEIYAPYCTLAIAEELL 330
>gi|398951631|ref|ZP_10674204.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
gi|398156275|gb|EJM44698.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
Length = 370
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 184/353 (52%), Gaps = 20/353 (5%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
WD+ + HDT + + E ++ HPE D + S++KR + Y+ +
Sbjct: 7 IWDERFMTHDT------RAWSLPWQEPID-HPEKGDTKRRFASLVKRSGLDQYLVPLAFS 59
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVL 138
PA LL HTP+Y++ ++ DG T + PGS A LA G +SA V+
Sbjct: 60 PASESDLLRVHTPEYVDRILNPTGPVWSDAGDGETPVGPGSADIARLAAGAVISAFNAVV 119
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNG 197
G AYAL+RPPGHHA + GYC +N + ++ +G K V VID DVH+GNG
Sbjct: 120 SGTVTNAYALIRPPGHHAIASQGMGYCIFHNTAVGIRHLQQTGAVKRVAVIDWDVHHGNG 179
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
T FY VLTISLH + +P G V ++G G G G NLNIPLP G+G Y
Sbjct: 180 TETLFYDDPSVLTISLHQDD-----LYPIGRGKVQDIGTGPGMGANLNIPLPAGSGRGAY 234
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ A +V+PA+++F+P++IV+ G DS+A DP GRQ L YRE+ V +LA+
Sbjct: 235 LGAFERVVMPAVRRFQPDLIVIASGFDSAAMDPFGRQLLYSGAYRELTTQVMNLAEEVCK 294
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP----IAYYPEDEAFP 365
R++ V EGGY +C A +E + A + DP +A PE P
Sbjct: 295 SRVVAVHEGGYDPLMGPFCGLAVVETLAGRRTA-VEDPWMNTVANLPEQALLP 346
>gi|330467195|ref|YP_004404938.1| histone deacetylase superfamily protein [Verrucosispora maris
AB-18-032]
gi|328810166|gb|AEB44338.1| histone deacetylase superfamily protein [Verrucosispora maris
AB-18-032]
Length = 377
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 164/290 (56%), Gaps = 8/290 (2%)
Query: 81 AQIPQLLSFHTPDYINEL-VEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVL 138
A + +LL HT D++ + ++D GG DG + + PGS+ A LA G + + V
Sbjct: 67 ATMAELLRVHTGDHVQHIKTQSDLRGGGDAGDGFSPVGPGSYAIARLAAGGLIELVTAVA 126
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNG 197
G YAL RPPGHHA G+C NN +A + A G ++ ++D DVH+GNG
Sbjct: 127 RGEVTNGYALTRPPGHHATADRGMGFCLFNNIAVAARHAQAELGLTRIAIVDWDVHHGNG 186
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T FY VLTISLH G P +G + E G G+G GY +N+PLP GTG GY+
Sbjct: 187 TQSIFYTDPSVLTISLHQA----GCFPPDSGWIRENGAGDGTGYAINVPLPPGTGHAGYL 242
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
HAMTE+V+PA+++F P++I+L G D++ FDP RQ LT YR M R++ ADR G
Sbjct: 243 HAMTEIVLPALERFAPDLILLANGFDANVFDPMARQMLTAASYRAMTRMLTDAADRLCHG 302
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVK 367
RL+ EGGY Y YC A LE + ++DP+A + A P++
Sbjct: 303 RLVAAHEGGYSPFYVPYCALAFLEELAGT-TTRVTDPLAVVADYAAEPLQ 351
>gi|399910612|ref|ZP_10778926.1| histone deacetylase superfamily protein [Halomonas sp. KM-1]
Length = 375
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 191/366 (52%), Gaps = 21/366 (5%)
Query: 20 FWDDGMLNHDTGK-GLFDTGFDPG-FLEV--LEKHPENSDRIKNIVSILKRGPISPYISW 75
FW + HD G G+F PG FL+ + PE+ R+KN++ + G I +
Sbjct: 10 FWHERCFWHDPGAIGVFSA---PGEFLQPQPASESPESKRRLKNLLEV--SGLIDE-LEV 63
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
PA L FHT Y++EL E D+ G + PGS AA + G ++A++
Sbjct: 64 RKAPPASREDLARFHTGRYLDELEEGDRTCGGDAGECAPYTPGSLAAARQSAGLAIAAVE 123
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
V G AYAL RPPGHHA+ G+C L N +AV A G +V ++D DVH+
Sbjct: 124 AVAGGELPNAYALCRPPGHHAEADRGRGFCLLGNIPVAVMHARALGLVRRVAILDWDVHH 183
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNG FY VLT+S+H G G DELGEG G G NLN+P+P G+G
Sbjct: 184 GNGQQAAFYDDPDVLTVSIHQA----GNYPLDTGDFDELGEGAGLGANLNLPMPPGSGIG 239
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y +AM ELV+PAI F P++IV+ G D+ DP G+ L + M + ++ LA+R
Sbjct: 240 AYRYAMQELVLPAIGDFAPDLIVVACGYDACGKDPLGKMMLNSSAFAAMTQQLKDLAERI 299
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
SGG+L+++ EGGY Y C HA L+ VL+ + D P+D+ ++++
Sbjct: 300 SGGKLVMIHEGGYSEGYVPLCGHAVLQ-VLSGSRIAVPD-----PQDDEIAAWAYQALQP 353
Query: 375 YQNDVI 380
+Q +I
Sbjct: 354 HQRALI 359
>gi|227489300|ref|ZP_03919616.1| histone deacetylase superfamily protein [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090673|gb|EEI25985.1| histone deacetylase superfamily protein [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 381
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 185/335 (55%), Gaps = 17/335 (5%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGF-LEVLEKH---PENSDRIKNIVSILKRGPISPY 72
+ WD HDTG G D DP L+ + +H PE R+ ++ + K +S
Sbjct: 8 VGYVWDTLYGWHDTGTG-GDMPSDPARGLQPVYRHYSSPEPKRRLNELIQVSK---LSRE 63
Query: 73 ISWHSGIPAQIPQLLSFHTPDYINELVEADK--AGGKMVCDGTVLNPGSWGAALLAVGTT 130
I IP +L HT + N +VE GG + L + A+L+ G
Sbjct: 64 IQHMRAIPCTREDILRVHTEGHWNRMVEQSALPKGGDCGDGASPLGHNALDIAVLSAGGA 123
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
+ A+ VLDG AYAL+ PPGHHA G+C NN+ +AV AL + KV ++D
Sbjct: 124 MVAVDAVLDGQVDRAYALINPPGHHACKDKGMGFCMFNNSSVAVAHALERNDVSKVAIVD 183
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLP 248
DVH+GNGT + ++ ++ VLTIS+H + ++P N G VDE+G G G G+N+NIPLP
Sbjct: 184 WDVHHGNGTQDIWWDNSNVLTISIHQDR-----NYPVNSGFVDEIGSGAGTGFNINIPLP 238
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
G+GD Y HA+T++VVPA++ F P++IV+ G D++ DP GR +T G+ + R +
Sbjct: 239 PGSGDAAYCHAITDIVVPALEDFSPDLIVISSGYDAAMMDPLGRMMVTAQGFNNLTRKMV 298
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
S A+ G+L+ +QEGGY Y +C ATLE +
Sbjct: 299 SAAELLCDGKLVFIQEGGYCQYYVPFCGLATLEAL 333
>gi|229590466|ref|YP_002872585.1| histone deacetylase family protein [Pseudomonas fluorescens SBW25]
gi|229362332|emb|CAY49234.1| histone deacetylase family protein [Pseudomonas fluorescens SBW25]
Length = 370
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 184/331 (55%), Gaps = 6/331 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L +S ++ H+ A LL H +Y+ AGG +
Sbjct: 39 HAESPETKRRMKSLLDVSGLSHHLDIHNAAVASETDLLRVHGREYLQRFKALSDAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G T++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GPQAPIGPGSYEIARLSAGLTMAAVDTVLKGLADNAYSLSRPPGHHCLADSAMGFCFLAN 158
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A SG GKV VID DVH+GNGT F VLTISLH + G + P + +G
Sbjct: 159 IAIAIEAAKARSGLGKVAVIDWDVHHGNGTQAIFEARADVLTISLHQD-GCYPPGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G N+NIPLP G G Y+HAMT +VVPA+++F+P +I++ G D++A D
Sbjct: 216 EQDR-GRGAGRGANINIPLPPGCGHDAYLHAMTRIVVPALERFQPELIIVACGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R M R VR A+R GRL++V EGGY Y +C ATLE + +
Sbjct: 275 PLARMLLHSESFRLMTRCVRQAAERLCQGRLVLVHEGGYSEAYVPFCGLATLEELSGVRT 334
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDV 379
A + DP+ E + ++E K++ + +
Sbjct: 335 A-VEDPMLALVELQQPKAALLEFQKRWIDQL 364
>gi|333925437|ref|YP_004499016.1| histone deacetylase superfamily protein [Serratia sp. AS12]
gi|333930390|ref|YP_004503968.1| histone deacetylase superfamily protein [Serratia plymuthica AS9]
gi|386327261|ref|YP_006023431.1| histone deacetylase superfamily protein [Serratia sp. AS13]
gi|333471997|gb|AEF43707.1| histone deacetylase superfamily [Serratia plymuthica AS9]
gi|333489497|gb|AEF48659.1| histone deacetylase superfamily [Serratia sp. AS12]
gi|333959594|gb|AEG26367.1| histone deacetylase superfamily [Serratia sp. AS13]
Length = 370
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 171/294 (58%), Gaps = 8/294 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + +S + S A LL H Y+ + GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLSRRLRLQSAELATDEDLLRIHPAGYLQRFKQLSDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + L PGS+ A L+ G +A++ VL G AYAL RPPGHH P + G+CFL
Sbjct: 98 LGEEAPLGPGSYEIAKLSAGLACAAVEAVLQGELDNAYALSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A++ A G GKV V+D DVH+GNGT +++ + VLT+SLH + G + + +
Sbjct: 158 NIPIAIERAKAQYGLGKVAVLDWDVHHGNGTQHIYWQRDDVLTLSLHQD-GCFPAGY--S 214
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G D G G G G N+NIPL GTGD GY++A+ ++V+PA+++F+P +I++ G D++A
Sbjct: 215 GEQDR-GAGAGEGCNINIPLLAGTGDDGYLYALRQIVIPALEQFQPELIIIACGYDANAI 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L D +R M +V+ ADR GG+L++V EGGY +Y +C A +E
Sbjct: 274 DPLARMQLHSDSFRSMTALVQDAADRLCGGKLVMVHEGGYAESYVPFCGLAVME 327
>gi|398866297|ref|ZP_10621796.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM78]
gi|398241348|gb|EJN27002.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM78]
Length = 370
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 182/353 (51%), Gaps = 20/353 (5%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
WD+ + HDT + + E ++ HPE D + S++KR + Y+
Sbjct: 7 IWDERFMTHDT------RAWSLPWQEPID-HPEKGDTKRRFASLVKRSGLDQYLVPLPFT 59
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVL 138
PA LL HTP+Y++ ++ DG T + PGS A LA G +SA V+
Sbjct: 60 PASEADLLRVHTPEYVDRILNPTGPVWSDAGDGETPVGPGSADIARLAAGAVISAFNAVV 119
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNG 197
G AYAL+RPPGHHA GYC +N + ++ +G K V VID DVH+GNG
Sbjct: 120 SGTVTNAYALIRPPGHHAIANQGMGYCIFHNTAVGIRHLQQTGAVKRVAVIDWDVHHGNG 179
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
T FY VLTISLH + +P G V ++G G G G NLNIPLP G+G Y
Sbjct: 180 TETLFYDDPSVLTISLHQDD-----LYPIGRGKVQDIGTGPGLGANLNIPLPAGSGRGAY 234
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ A +V+PA+++F+P++IV+ G DS+A DP GRQ L YRE+ V +LA+
Sbjct: 235 LGAFERIVMPAVRRFQPDLIVIASGFDSAAMDPFGRQLLYSGAYRELTTQVMNLAEEVCK 294
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP----IAYYPEDEAFP 365
R++ V EGGY +C A +E + A + DP +A PE P
Sbjct: 295 SRVVAVHEGGYDPLMGPFCGLAVVETLAGRRTA-VEDPWMNTVANLPEQALLP 346
>gi|387893899|ref|YP_006324196.1| histone deacetylase family protein [Pseudomonas fluorescens A506]
gi|387164014|gb|AFJ59213.1| histone deacetylase family protein [Pseudomonas fluorescens A506]
Length = 370
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 175/310 (56%), Gaps = 6/310 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L +S + HS PA LL H+ Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLSRQLQLHSAPPASEEDLLRVHSRAYLQRFKALSDAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G TL+A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GPQAPIGPGSFEIAQLSAGLTLAAVDMVLKGQAHNAYSLSRPPGHHCLADSAMGFCFLAN 158
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +G GKV VID DVH+GNGT F VLT+SLH + G + P + +G
Sbjct: 159 IAIAIEAAKARNGLGKVAVIDWDVHHGNGTQSIFEERADVLTVSLHQD-GCYPPGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G N+NIPLP G+G Y+HAM +VVPA+++FEP +I++ G D++A D
Sbjct: 216 EQDR-GRGAGVGANINIPLPPGSGHATYLHAMERIVVPALERFEPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R + R +R A+R GRL++V EGGY Y +C ATLE + +
Sbjct: 275 PLARMLLHSESFRLLTRALRLAAERLCQGRLVLVHEGGYSEAYVPFCGLATLEELSGVRT 334
Query: 349 ALLSDPIAYY 358
A + DP+ +
Sbjct: 335 A-VQDPMLEF 343
>gi|440229306|ref|YP_007343099.1| deacetylase, histone deacetylase/acetoin utilization protein
[Serratia marcescens FGI94]
gi|440051011|gb|AGB80914.1| deacetylase, histone deacetylase/acetoin utilization protein
[Serratia marcescens FGI94]
Length = 370
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 164/294 (55%), Gaps = 8/294 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + +S + S A L H P Y+ + GG +
Sbjct: 41 ESPETKRRMKNLMDV---SGLSRRLQLRSAELADEQDLQRIHPPHYLQRFKQLSDNGGGL 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + L PGS+ A L+ G SA++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGEEAPLGPGSYEIAKLSAGLACSALEAVLRGELDNAYSLSRPPGHHCLPEQSMGFCFLA 157
Query: 169 NAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A++ A G G+V VID DVH+GNGT ++R + VLTISLH + G + +
Sbjct: 158 NIPIAIERAKQRCGLGRVAVIDWDVHHGNGTQHIYWRRDDVLTISLHQD-GCFPAGYA-- 214
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G D G G GYN+NIPL G GD Y++AM +V+PA+ +F P IV+ G D++A
Sbjct: 215 GEQDR-GADAGLGYNINIPLLAGAGDDSYLYAMQRIVLPALAQFRPEAIVIACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L D +R M +V+ ADR GG+LL+V EGGY +Y +C A +E
Sbjct: 274 DPLARMQLHSDSFRAMTALVQEAADRLCGGKLLLVHEGGYAESYVPFCGLAVME 327
>gi|270263818|ref|ZP_06192086.1| hypothetical protein SOD_f00290 [Serratia odorifera 4Rx13]
gi|270042011|gb|EFA15107.1| hypothetical protein SOD_f00290 [Serratia odorifera 4Rx13]
Length = 370
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 170/294 (57%), Gaps = 8/294 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + +S + S A LL H DY+ + GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLSRQLRLLSAELATDEDLLRIHPADYLQRFKQLSDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + L PGS+ A L+ G +A++ VL AYAL RPPGHH P + G+CFL
Sbjct: 98 LGEEAPLGPGSYEIAKLSAGLACAAVEAVLQAELDNAYALSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A++ A G GKV V+D DVH+GNGT +++ + VLT+SLH + G + + +
Sbjct: 158 NIPIAIERAKAQYGLGKVAVLDWDVHHGNGTQHIYWQRDDVLTLSLHQD-GCFPAGY--S 214
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G D G G G G N+NIPL GTGD GY++A+ +V+PA+++F+P +I++ G D++A
Sbjct: 215 GEQDR-GAGAGEGCNINIPLLAGTGDDGYLYALRRIVIPALEQFQPELIIIACGYDANAI 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L D +R M +V+ ADR GG+L++V EGGY +Y +C A +E
Sbjct: 274 DPLARMQLHSDSFRSMTALVQDAADRLCGGKLVMVHEGGYAESYVPFCGLAVME 327
>gi|433605247|ref|YP_007037616.1| hypothetical protein BN6_34450 [Saccharothrix espanaensis DSM
44229]
gi|407883100|emb|CCH30743.1| hypothetical protein BN6_34450 [Saccharothrix espanaensis DSM
44229]
Length = 548
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 170/315 (53%), Gaps = 5/315 (1%)
Query: 28 HDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL 87
HDTG DP H EN + + + +L + ++ + PA ++L
Sbjct: 197 HDTGTHASLAPADPRRGIQPFHHLENPEAKRRVHELLVVTGLIDRLTRLTPRPATDEEIL 256
Query: 88 SFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYA 147
HTP ++ L +A+ GG T G A LA G + A + VL+G AYA
Sbjct: 257 LVHTPGHLARLTKANDTGGDGGDGSTPFGRGGLDIARLAAGGAIRAAEAVLEGKVDNAYA 316
Query: 148 LVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSN 206
LVRPPGHHA P G+C L N +A++ + +V V+DIDVH+GNGT F+
Sbjct: 317 LVRPPGHHAVPDSGMGFCMLANIAIALRAVRRTHNVARVAVVDIDVHHGNGTQTVFWEDP 376
Query: 207 KVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVP 266
VL +SLH + + P P +G V E G G GFGY LN+PLP GTG GY+ A +V+P
Sbjct: 377 NVLALSLHQDR--FFP--PNSGFVTERGAGAGFGYTLNLPLPPGTGTGGYLEATRRVVLP 432
Query: 267 AIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGG 326
A+++F+P++IV+ G D++A DP GR LT YREM R+V A GR+L V EGG
Sbjct: 433 ALRRFKPDLIVVAAGFDANALDPLGRMMLTPRAYREMARMVLDAAADLCDGRVLCVHEGG 492
Query: 327 YHVTYSAYCLHATLE 341
Y Y +C +A +E
Sbjct: 493 YAAAYVPFCANAVIE 507
>gi|426409120|ref|YP_007029219.1| histone deacetylase [Pseudomonas sp. UW4]
gi|426267337|gb|AFY19414.1| histone deacetylase [Pseudomonas sp. UW4]
Length = 388
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 182/353 (51%), Gaps = 20/353 (5%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
WD+ + HDT + + E ++ HPE D + S++KR + Y+
Sbjct: 25 IWDERFMTHDT------RAWSLPWQEPID-HPEKGDTKRRFASLVKRSGLDQYLVPLPFT 77
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVL 138
PA LL HTP+Y++ ++ DG T + PGS A LA G +SA V+
Sbjct: 78 PASEADLLRVHTPEYVDRILNPIGPVWSDAGDGETPVGPGSADIARLAAGAVISAFNAVV 137
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNG 197
G AYAL+RPPGHHA GYC +N + ++ +G K V VID DVH+GNG
Sbjct: 138 SGTVTNAYALIRPPGHHAIANQGMGYCIFHNTAVGIRHLQQTGAVKRVAVIDWDVHHGNG 197
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
T FY VLTISLH + +P G V ++G G G G NLNIPLP G+G Y
Sbjct: 198 TETLFYDDPSVLTISLHQDD-----LYPIGRGKVQDIGTGPGLGANLNIPLPAGSGRGAY 252
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ A +V+PA+++F+P++IV+ G DS+A DP GRQ L YRE+ V +LA+
Sbjct: 253 LGAFERIVMPAVRRFQPDLIVIASGFDSAAMDPFGRQLLYSGAYRELTTQVMNLAEEVCK 312
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP----IAYYPEDEAFP 365
R++ V EGGY +C A +E + A + DP +A PE P
Sbjct: 313 SRVVAVHEGGYDPLMGPFCGLAVVETLAGRRTA-VEDPWMNTVANLPEQALLP 364
>gi|294497858|ref|YP_003561558.1| histone deacetylase family protein [Bacillus megaterium QM B1551]
gi|294347795|gb|ADE68124.1| histone deacetylase family protein [Bacillus megaterium QM B1551]
Length = 373
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 180/328 (54%), Gaps = 12/328 (3%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLEVLE--KHPENSDRIKNIVSILKRGPISPYISWHS 77
WDD L H+TGK F+ G E +E EN R+ I ++++ + ++ S
Sbjct: 8 IWDDRFLRHNTGK--IQYVFEGG--ETVEPCDEFENKHRMNVIKEMIEKSGLVHHLVRQS 63
Query: 78 GIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHV 137
A LL HT ++I + +A +A + V + + G A L+ G + A+ V
Sbjct: 64 PYEASDEDLLRVHTKNHIGHVQKACEAETREVGPEAYASAETEGIARLSAGAVMKAVDTV 123
Query: 138 LDGHG-KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYG 195
++ YA +RPPGHHA A G+CF NN + A+ G +V ++D DVH+G
Sbjct: 124 MESETISKVYAQIRPPGHHASSDQAMGFCFYNNVAVGAAYAIEHYGLKRVAILDWDVHHG 183
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGT + FY + VL IS+H + P ++G V E+G+G+G GYN+NIP+P+ TGD G
Sbjct: 184 NGTQDIFYERDDVLVISIHEE--DYFPL--ESGQVYEIGQGKGEGYNVNIPVPSLTGDEG 239
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y + ++ P I +FEP +I++ GQD++A DP R +T +G++ M VR LA+ Y
Sbjct: 240 YQYVFESIIAPVISQFEPELIIISAGQDANALDPISRLMVTREGFKYMANKVRELAETYC 299
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGV 343
GRL++ QEGGY++ Y +EG+
Sbjct: 300 EGRLIVAQEGGYNLAYLPIATMGVIEGL 327
>gi|340355419|ref|ZP_08678106.1| histone deacetylase [Sporosarcina newyorkensis 2681]
gi|339622506|gb|EGQ27026.1| histone deacetylase [Sporosarcina newyorkensis 2681]
Length = 394
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 191/366 (52%), Gaps = 20/366 (5%)
Query: 21 WDDGMLNHDTGKGLFDTGFDP--GFLE--VLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+D+ HD G G T + P G+++ V +HPE R+ N+ L R + +
Sbjct: 27 FDESYFWHDNGSG---TLYLPSGGYMQTDVFVEHPETKRRVNNL---LARCGLMKKLEQI 80
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
A ++ FH P+Y+ + + G D ++ GS+ ALL+ G L A+
Sbjct: 81 EPRSATKEEIEYFHAPEYVERVKKLSDTTGGDAGDHAIVGRGSYEIALLSTGGALRAVDA 140
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYG 195
V++G YA+ RPPGHHA+ G+C NN +A Q A G +V+V+D DVH+G
Sbjct: 141 VMEGEVNNVYAMTRPPGHHAEREKGIGFCIFNNVAIAAQYARKKYGLKRVLVLDWDVHHG 200
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDR 254
NGT + FY VL S+H + S P N G +++G G GYN+NIPLP GTGD
Sbjct: 201 NGTEQAFYEDPNVLFFSIHQH-----LSFPNNTGFKEDVGAVAGRGYNVNIPLPPGTGDA 255
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GYVHA +V P +F+P ++++ GQD FDP GR +T +G+ ++ + +AD Y
Sbjct: 256 GYVHAFKSIVEPIAAEFKPELVIISAGQDPGMFDPLGRMMMTAEGFGQLTDCMLRIADTY 315
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
G+++ EGGY Y +C +E + + ++DP Y + +P K+ + K+
Sbjct: 316 CDGKIVFCHEGGYSNAYVPFCTLKIIERLSGIETN-VTDP--YASGSQGYPDKLYPNQKE 372
Query: 375 YQNDVI 380
++VI
Sbjct: 373 AIDEVI 378
>gi|336249159|ref|YP_004592869.1| putative deacetylase [Enterobacter aerogenes KCTC 2190]
gi|334735215|gb|AEG97590.1| putative deacetylase [Enterobacter aerogenes KCTC 2190]
Length = 371
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 180/336 (53%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P + S A + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLELRSAAAASLEDLRRIHPDSYLKRFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKALLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYSGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIVACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E L+
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVME-TLSGV 332
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 333 RTEVQDPLLEFIQQQ----QPRAAFAQFQRQAIDRL 364
>gi|126738655|ref|ZP_01754360.1| histone deacetylase family protein [Roseobacter sp. SK209-2-6]
gi|126720454|gb|EBA17160.1| histone deacetylase family protein [Roseobacter sp. SK209-2-6]
Length = 370
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 159/296 (53%), Gaps = 12/296 (4%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L + PE R+KN++ + +S + S PA LL H Y++ E +GG
Sbjct: 39 LPEAPETKRRLKNLMDVTG---LSDELLLTSAKPASFEDLLRVHPQSYLDAFKEKSDSGG 95
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T PG++ A L+ G A++ VL G + AYAL RPPGHH P +G+C
Sbjct: 96 GELGLRTPFGPGAFEIAALSAGLVSKAIELVLTGEARNAYALSRPPGHHCLPDYPNGFCL 155
Query: 167 LNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A +G GK V+D DVH+GNGT F VLTISLH P
Sbjct: 156 LANIAIAIEQARQAGLGKRFAVVDWDVHHGNGTEAIFLDREDVLTISLHQERCY----PP 211
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G V E+G G G GYN+NIPLP G G R Y+ AM LV+P ++ F+ +++++ G D+S
Sbjct: 212 DTGEVSEIGTGAGAGYNMNIPLPPGCGHRAYLDAMERLVLPKLRAFDADLVIIACGFDAS 271
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
FDP R + + YR M R + + +GGR++ EGGY Y +C HA LE
Sbjct: 272 GFDPLARMMCSAETYRLMTRQIMEV----TGGRMVAAHEGGYSELYVPFCGHAMLE 323
>gi|116051799|ref|YP_789359.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421172974|ref|ZP_15630729.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa CI27]
gi|115587020|gb|ABJ13035.1| putative deacetylase [Pseudomonas aeruginosa UCBPP-PA14]
gi|404536645|gb|EKA46281.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa CI27]
Length = 380
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 172/312 (55%), Gaps = 6/312 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH P A G+CF N
Sbjct: 99 GQDAPIGPGSYEIARLSAGLAIAALDVVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V V+D DVH+GNGT +YR + VL+ISLH + G + P +
Sbjct: 159 IAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQD-GCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+++GE G G+NLN+PL G G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 215 GAEDIGEDRGRGFNLNVPLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M +VR A+R++ GRL++V EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSDSFRAMTAMVRDAAERHADGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRS 334
Query: 349 ALLSDPIAYYPE 360
A + DP+ + E
Sbjct: 335 A-VRDPLRDFIE 345
>gi|83952525|ref|ZP_00961256.1| histone deacetylase/AcuC/AphA family protein [Roseovarius
nubinhibens ISM]
gi|83836198|gb|EAP75496.1| histone deacetylase/AcuC/AphA family protein [Roseovarius
nubinhibens ISM]
Length = 375
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 161/294 (54%), Gaps = 8/294 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE R++N+V + ++P ++ H PA L H +I+ L + AGG
Sbjct: 46 EHPETKRRLQNLVEATE---LAPKLASHRPRPAGDEILRLVHPQSHIDHLAKICAAGGGD 102
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T + P S A LAVG +A+ V+ G Y L RPPGHHA P A G C
Sbjct: 103 AGELTPVGPASLEIARLAVGGVTAAVDEVMTGDWDNGYVLCRPPGHHALPDKAMGSCLFA 162
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA + + A G G+V V+D DVH+GNGT FY VLTISLH + + P H +
Sbjct: 163 NAAIGAKYAQERHGIGRVAVVDWDVHHGNGTEAIFYDDPSVLTISLHQD--NLFPLH--S 218
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G ++ LG G G G+NLNIPLP GTG GY HA ELV+PA+ F P +IV+ G DS A
Sbjct: 219 GPMEALGAGAGLGHNLNIPLPPGTGTGGYKHAFEELVLPALDAFAPELIVVASGFDSCAM 278
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP G Q L Y M + LA R++GGR+++ EGGY Y YC A LE
Sbjct: 279 DPLGMQMLKSSDYAWMMGQLMELAARHAGGRIIVTHEGGYSPQYVPYCGLAVLE 332
>gi|227540890|ref|ZP_03970939.1| histone deacetylase superfamily protein [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227183150|gb|EEI64122.1| histone deacetylase superfamily protein [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 381
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 184/335 (54%), Gaps = 17/335 (5%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGF-LEVLEKH---PENSDRIKNIVSILKRGPISPY 72
+ WD HDTG G D DP L+ + +H PE R+ ++ + K +S
Sbjct: 8 VGYVWDTLYGWHDTGTG-GDMPSDPARGLQPVYRHYSSPEPKRRLNELIQVSK---LSRE 63
Query: 73 ISWHSGIPAQIPQLLSFHTPDYINELVEADK--AGGKMVCDGTVLNPGSWGAALLAVGTT 130
I IP +L HT + N +VE GG + + A+L+ G
Sbjct: 64 IQHMRAIPCTREDILRVHTEGHWNRMVEQSALPKGGDCGDGASPFGHNALDIAVLSAGGA 123
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
+ A+ VLDG AYAL+ PPGHHA G+C NN+ +AV AL + KV ++D
Sbjct: 124 IVAVDAVLDGQVDRAYALINPPGHHACKDKGMGFCMFNNSSVAVAHALERNDVSKVAIVD 183
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLP 248
DVH+GNGT + ++ ++ VLTIS+H + ++P N G VDE+G G G G+N+NIPLP
Sbjct: 184 WDVHHGNGTQDIWWDNSNVLTISIHQDR-----NYPVNSGFVDEIGSGAGTGFNINIPLP 238
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
G+GD Y HA+T++VVPA++ F P++IV+ G D++ DP GR +T G+ + R +
Sbjct: 239 PGSGDAAYCHAITDIVVPALEDFSPDLIVISSGYDAAMMDPLGRMMVTAQGFNNLTRKMV 298
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
S A+ G+L+ +QEGGY Y +C ATLE +
Sbjct: 299 SAAELLCDGKLVFIQEGGYCQYYVPFCGLATLEAL 333
>gi|126725172|ref|ZP_01741015.1| deacetylase / probable acetylpolyamine aminohydrolase
[Rhodobacterales bacterium HTCC2150]
gi|126706336|gb|EBA05426.1| deacetylase / probable acetylpolyamine aminohydrolase
[Rhodobacteraceae bacterium HTCC2150]
Length = 373
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 164/296 (55%), Gaps = 10/296 (3%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L ++PE R+KN++ + +S + A +L H +Y+NE GG
Sbjct: 36 LPENPETKRRLKNLMDVTG---LSQELDMLGSDAATFQELARVHPENYLNEFKSLSDGGG 92
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T G + A ++ G SA+ VL+G + +YAL RPPGHH P +G+C
Sbjct: 93 GELGLRTPFGKGGYEIAAVSAGLAKSAIFSVLNGTHENSYALSRPPGHHCLPDFPNGFCL 152
Query: 167 LNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N + ++ A+ G GK V+D DVH+GNGT FY N VLTIS+H + ++P
Sbjct: 153 LANIAVGIKAAIAEGKGKRFAVLDWDVHHGNGTEAIFYDRNDVLTISIHQEN-----NYP 207
Query: 226 QN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
+ G+V++ G+G G GYN+NIPLP G G Y+ M + +PAI+ F P++I++ G D+
Sbjct: 208 MDTGSVNDQGKGAGLGYNMNIPLPPGAGHNTYIETMERIALPAIENFAPDIIIIACGFDA 267
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
SA DP R TM+ +R M V++LA + GRL++ EGGY Y +C HA L
Sbjct: 268 SAVDPLSRMLATMETFRAMTEQVKTLASKICDGRLMMAHEGGYSEVYVPFCGHAVL 323
>gi|444352694|ref|YP_007388838.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Enterobacter aerogenes EA1509E]
gi|443903524|emb|CCG31298.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Enterobacter aerogenes EA1509E]
Length = 371
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 180/336 (53%), Gaps = 13/336 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + ++P + S A + L H Y+ GG M
Sbjct: 41 ESPETKRRMKNLMDV---SGLTPQLELCSAAAASLEDLRRIHPDSYLERFKAISDNGGGM 97
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL
Sbjct: 98 LGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLA 157
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G + P +
Sbjct: 158 NIPIAVERAKALLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYSGE 216
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A
Sbjct: 217 ---DDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIVACGYDANAM 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E L+
Sbjct: 274 DPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVME-TLSGV 332
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ DP+ + + + + + Q+Q I L
Sbjct: 333 RTEVQDPLLEFIQQQ----QPRAAFAQFQRQAIDRL 364
>gi|58036475|dbj|BAD88603.1| deacetylase [Enterobacter aerogenes]
Length = 323
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 178/328 (54%), Gaps = 13/328 (3%)
Query: 57 IKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLN 116
+KN++ + ++P ++ S PA + L H Y+ GG M+ L
Sbjct: 1 MKNLMDV---SGLTPQLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGMLGKEAPLG 57
Query: 117 PGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQL 176
PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL N +AV+
Sbjct: 58 PGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLANIPIAVER 117
Query: 177 ALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGE 235
A G GKV +ID DVH+GNGT + + + VLTISLH + G + P + D+ G
Sbjct: 118 AKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD-GCFPPGYAGE---DDRGV 173
Query: 236 GEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCL 295
G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D++A DP R L
Sbjct: 174 GAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQL 233
Query: 296 TMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
D +R M V+ ADR GG+L++V EGGY +Y +C A +E + + + DP+
Sbjct: 234 HSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTE-VQDPL 292
Query: 356 AYYPEDEAFPVKVIESIKQYQNDVIPFL 383
+ + + + + Q+Q I L
Sbjct: 293 LEFIQQQ----QPRAAFAQFQRQAIDRL 316
>gi|423691683|ref|ZP_17666203.1| histone deacetylase family protein [Pseudomonas fluorescens SS101]
gi|387999968|gb|EIK61297.1| histone deacetylase family protein [Pseudomonas fluorescens SS101]
Length = 370
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 173/307 (56%), Gaps = 6/307 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L +S ++ HS PA LL H+ Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLSRHLHLHSAPPASEEDLLRVHSRAYLQRFKALSDAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G TL+A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GPQAPIGPGSYEIAQLSAGLTLAAVDAVLKGQAHNAYSLSRPPGHHCLADSAMGFCFLAN 158
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G GKV VID DVH+GNGT F VLTISLH + G + P + +G
Sbjct: 159 IAIAIEAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTISLHQD-GCYPPGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G N+NIPLP G+G Y+ AM +V+PA+++FEP +I++ G D++A D
Sbjct: 216 EQDR-GRGVGLGANINIPLPPGSGHATYLQAMERIVLPALERFEPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R M R +R A+R GRL++V EGGY Y +C ATLE + +
Sbjct: 275 PLARMLLHSESFRLMTRALRLAAERLCQGRLVLVHEGGYSEAYVPFCGLATLEELSGVRT 334
Query: 349 ALLSDPI 355
A + DP+
Sbjct: 335 A-VQDPM 340
>gi|399009923|ref|ZP_10712321.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM17]
gi|398109031|gb|EJL98974.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM17]
Length = 372
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 186/338 (55%), Gaps = 14/338 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ + S A LL H+ +Y+ +AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTRQLQVRSATAATEEDLLRVHSAEYLQRFKALSEAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GPQAPIGPGSYEIARLSAGLAIAAVDAVLGGEADNAYSLSRPPGHHCLADGAMGFCFLAN 158
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G GKV VID DVH+GNGT F VLT+SLH + G + P + +G
Sbjct: 159 IAIAIEAAKARRGLGKVAVIDWDVHHGNGTQSIFEERGDVLTLSLHQD-GCFPPGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G NLNIPL G+G Y+HA+ +V+PA+++FEP +I++ G D++A D
Sbjct: 216 EQDR-GRGAGLGANLNIPLLPGSGHDAYLHALQRIVIPALERFEPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M R +R A+R GRL++V EGGY Y +C AT+E + +
Sbjct: 275 PLARMLLHSDSFRAMTRQLREAAERLCQGRLVLVHEGGYSEAYVPFCGLATVEELAGVRT 334
Query: 349 ALLSDPIAYY-------PEDEAFPVKVIESIKQ-YQND 378
A ++DP+ + P +AF ++I+ + Q + ND
Sbjct: 335 A-VTDPMLEFVQLQQPNPRFQAFQRQLIDDLAQTFLND 371
>gi|425899863|ref|ZP_18876454.1| histone deacetylase family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397890211|gb|EJL06693.1| histone deacetylase family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 371
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 187/338 (55%), Gaps = 14/338 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ ++ S A LL H+ +Y+ +AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTRHLQVRSATAASEEDLLRVHSAEYLQRFRALSEAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GPQAPIGPGSYEIARLSAGLAIAAVDTVLGGEADNAYSLSRPPGHHCLADGAMGFCFLAN 158
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G GKV VID DVH+GNGT F VLT+SLH + G + P + +G
Sbjct: 159 IAIAIEAAKARRGLGKVAVIDWDVHHGNGTQSIFEERGDVLTLSLHQD-GCFPPGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G N+NIPL G+G Y+HA+ +V+PA+++FEP +I++ G D++A D
Sbjct: 216 EQDR-GRGAGLGANINIPLLPGSGHDAYLHALQRIVIPALERFEPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M R VR A+R GRL++V EGGY Y +C AT+E + +
Sbjct: 275 PLARMLLHSDSFRAMTRQVREAAERLCQGRLVLVHEGGYSEAYVPFCGLATVEELAGVRT 334
Query: 349 ALLSDPIAYY-------PEDEAFPVKVIESIKQ-YQND 378
A ++DP+ + P +AF ++I+ + Q + ND
Sbjct: 335 A-VTDPMLEFVQLQQPNPGFQAFQRQLIDDLAQTFFND 371
>gi|290477143|ref|YP_003470058.1| histone deacetylase-like amidohydrolase (HDAC-like amidohydrolase)
(HDAH) [Xenorhabdus bovienii SS-2004]
gi|289176491|emb|CBJ83300.1| Histone deacetylase-like amidohydrolase (HDAC-like amidohydrolase)
(HDAH) [Xenorhabdus bovienii SS-2004]
Length = 371
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 183/336 (54%), Gaps = 19/336 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S++ +S + S P L HT Y+ GG +
Sbjct: 40 HAESPETKRRMKSLMDVSGLSHSLELMSAEPIDEATLRLVHTESYLQRFKYLSDNGGGTL 99
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
L GS+ A L+ G T +A+K VL G AY+L RPPGHH P A G+CFL N
Sbjct: 100 GSEASLGAGSYEIAKLSAGLTYAAVKAVLQGELDNAYSLSRPPGHHCLPDQAMGFCFLAN 159
Query: 170 AGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
LA++ A G G+V V+D DVH+GNGT F++ + VLTISLH + +P
Sbjct: 160 ISLAIEKAKEQLGLGRVAVVDWDVHHGNGTQHIFWQRDDVLTISLHQDR-----CYPAGY 214
Query: 229 TVD-ELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+ + ++GEG G G+N+NIPL G G Y++AM ++V+PA+++++P +I++ G D++ F
Sbjct: 215 SGESDIGEGPGEGFNINIPLMAGAGHDSYMYAMDQIVMPALRRYQPELIIIACGYDANGF 274
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE------ 341
DP R L D +REM R ++ +AD + G+L++V EGGY Y +C A +E
Sbjct: 275 DPLARMQLHSDSFREMTRKMQQIADEFCHGKLVMVHEGGYSEAYVPFCGLAVMEELSGVR 334
Query: 342 -GVLNLPLAL--LSDPIAYYPEDEAFPVKVIESIKQ 374
V++ LA+ L P A + E + I+ +KQ
Sbjct: 335 TEVIDPALAILELQQPRAPF---ETLQRQAIDDLKQ 367
>gi|410624494|ref|ZP_11335291.1| histone deacetylase 5 [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410156001|dbj|GAC30665.1| histone deacetylase 5 [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 373
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 177/328 (53%), Gaps = 12/328 (3%)
Query: 19 VFWDDGMLNHDTGK--GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ W++ + H+TG G+ GFD L+ +E +PE RIKN++ K ++ +
Sbjct: 6 LVWNERYMWHNTGNAAGIMPAGFDVQPLQHVE-NPETKRRIKNLLDASK---LTNKLHLI 61
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
A ++L HTP Y+N+LVE +K GG T ++ S A LA G +
Sbjct: 62 EDRVASDAEILKVHTPRYLNQLVELNKTGGD-AGPFTPMSVNSLDIARLAAGGVMELTSA 120
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYG 195
V+ K YALVRPPGHHA G+C LNNA ++ AL N K+ +D DVH+G
Sbjct: 121 VVKRQVKNGYALVRPPGHHAVADGGMGFCLLNNAAISAHHALDNLNLKKIAFVDWDVHHG 180
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NG FY +VLTIS+H P G ++G GEG G+NLNIPLP GTG G
Sbjct: 181 NGAESIFYEDPRVLTISVHQERCF----PPDTGDNQDIGSGEGRGFNLNIPLPAGTGLGG 236
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y+ +V+PA+ KF P++I++ G D+ +DP GRQ +T GYR + ++ AD
Sbjct: 237 YLACFERVVLPALYKFSPDLIIVPSGFDAGIYDPLGRQMMTSSGYRRLTHMLLKAADELC 296
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGV 343
GRL++ EGGY+ + Y A LE +
Sbjct: 297 DGRLVMCHEGGYNPSTVPYHGLAVLEAL 324
>gi|443469036|ref|ZP_21059230.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
gi|442898325|gb|ELS25059.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
Length = 373
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 183/332 (55%), Gaps = 10/332 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S++ ++ + S PA LL H Y+ AGG +
Sbjct: 40 HAESPETKRRLKSLMDVSGLTRALQVSSAPPADEEDLLRVHPSHYLARFKALSDAGGGDL 99
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D + PGS+ A L+ G L+A+ VL G AYAL RPPGHH P A G+CFL N
Sbjct: 100 GDEASVGPGSYEIARLSAGLALAAVDTVLKGEADNAYALSRPPGHHCLPDQAMGFCFLAN 159
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G GKV VID DVH+GNGT +YR VLT+SLH + G + P +
Sbjct: 160 IAIAIEAAKARHGLGKVAVIDWDVHHGNGTQAIYYRRPDVLTLSLHQD-GCFPPGY---S 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D+ GEG G G NLNIPL G+G Y+ AM +V+PA+++F P +IV+ G D++A D
Sbjct: 216 GADDQGEGAGLGANLNIPLLPGSGHAAYLDAMERIVIPALERFRPELIVVACGYDANAVD 275
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +R M + +R A+R GRL++V EGGY Y +C A +E + +
Sbjct: 276 PLARMLLHSDSFRAMTQRLREAAERLCQGRLVMVHEGGYAEAYVPFCGLAVMEELAGIRT 335
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
++ DP+ + E + + E+ ++ Q+++I
Sbjct: 336 EVV-DPLRDFIELQ----QPGEAHRRLQSELI 362
>gi|388469257|ref|ZP_10143466.1| histone deacetylase family protein [Pseudomonas synxantha BG33R]
gi|388005954|gb|EIK67220.1| histone deacetylase family protein [Pseudomonas synxantha BG33R]
Length = 370
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 186/337 (55%), Gaps = 13/337 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ ++ S PA LL H+ Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTRHLHLLSAPPASEADLLRVHSSAYLQRFKALSDAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G T++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 99 GPQAPIGPGSYEIAKLSAGLTIAAVDTVLKGQAHNAYSLSRPPGHHCLADSAMGFCFLAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +++G GKV VID DVH+GNGT F VLT+SLH + + P + +G
Sbjct: 159 IAIAIEAAKVHNGLGKVAVIDWDVHHGNGTQSIFEERADVLTVSLHQD-ACYPPGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G N+NIPLP G+G Y HAM +V+PA+++FEP +I++ G D++A D
Sbjct: 216 EQDR-GRGPGLGANINIPLPPGSGHATYAHAMERIVLPALERFEPELIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R M R +R A+R GRL++V EGGY Y +C ATLE + +
Sbjct: 275 PLARMLLHSESFRLMTRSLRQAAERMCQGRLVLVHEGGYSEAYVPFCGLATLEELSGVRT 334
Query: 349 ALLSDPIAYYPE-------DEAFPVKVIESIKQYQND 378
A + DP+ + + +AF + +E + Q +D
Sbjct: 335 A-VQDPMLEFVQLQQPGAALQAFQQQWVERLAQGVSD 370
>gi|359393941|ref|ZP_09186994.1| Histone deacetylase-like amidohydrolase [Halomonas boliviensis LC1]
gi|357971188|gb|EHJ93633.1| Histone deacetylase-like amidohydrolase [Halomonas boliviensis LC1]
Length = 368
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 174/328 (53%), Gaps = 17/328 (5%)
Query: 20 FWDDGMLNHDTGK-GLFDTGFDPG-FLE--VLEKHPENSDRIKNIVSILKRGPISPYISW 75
+W + HD G G+F PG FL+ + PE+ R+KNI+ + G I ++
Sbjct: 7 YWHERCFWHDQGPIGVFSA---PGEFLQPQAASESPESKRRLKNILEV--SGLIDE-LNV 60
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
A + LL FHT Y+++L DKA G D PGSW AA + G +A++
Sbjct: 61 VKPPAAALEDLLRFHTTRYLDQLQAGDKARGGNGGDCAPFMPGSWAAATQSAGLANAAVE 120
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
V G AYAL RPPGHHA+ G+C L N +AV A G +V ++D DVH+
Sbjct: 121 AVALGEISNAYALCRPPGHHAEADQGRGFCLLGNIPVAVMRARALGQVNRVAILDWDVHH 180
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GNG FY VLTISLH ++P + G DE GEG G G NLN+PLP G G
Sbjct: 181 GNGQQAAFYDEPDVLTISLHQ-----AANYPLETGGFDEQGEGAGLGANLNLPLPPGCGL 235
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y +AM +LV+PA++ F P +IV+ G D+ A DP G+ L + M +++LA+R
Sbjct: 236 GAYAYAMEKLVLPALESFNPELIVVACGYDACAKDPLGKMLLNSQAFATMTAQLKTLAER 295
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLE 341
G+L+ + EGGY Y C H ++
Sbjct: 296 CCDGKLVFIHEGGYSEGYVPLCGHMVIQ 323
>gi|378950789|ref|YP_005208277.1| acetylpolyamine aminohydrolase [Pseudomonas fluorescens F113]
gi|359760803|gb|AEV62882.1| acetylpolyamine aminohydrolase [Pseudomonas fluorescens F113]
Length = 370
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 183/332 (55%), Gaps = 10/332 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S+L ++ ++ S PA LL HTP Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLLDVSGLTRHLQVRSANPATDADLLRVHTPGYLQRFKMMSDAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ PGS+ A L+ G ++A+ VL G AYAL RPPGHH A G+CFL N
Sbjct: 99 GPHAPIGPGSYEIATLSAGLAIAAVDAVLVGEVDNAYALSRPPGHHCLADSAMGFCFLAN 158
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G G V VID DVH+GNGT F VLTISLH + G + + +G
Sbjct: 159 IAIAIEAAKARRGLGNVAVIDWDVHHGNGTQSIFEERADVLTISLHQD-GCFPAGY--SG 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G G G G N+NIPLP G+G Y++AM +V+PA++ FEP +I++ G D++A D
Sbjct: 216 ETDR-GRGAGLGANINIPLPPGSGHEAYLYAMERIVIPALEHFEPALIIVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R+M +VR A+R GRL++V EGGY Y +C ATLE + +
Sbjct: 275 PLARMLLHSESFRQMTSLVRKAAERLCQGRLVLVHEGGYSEAYVPFCGLATLEELAGVRT 334
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
A ++DP+ + + + + E++ +Q +I
Sbjct: 335 A-VTDPMLEFVQLQ----QPKEALAAFQRHLI 361
>gi|126733309|ref|ZP_01749056.1| histone deacetylase family protein [Roseobacter sp. CCS2]
gi|126716175|gb|EBA13039.1| histone deacetylase family protein [Roseobacter sp. CCS2]
Length = 365
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 188/356 (52%), Gaps = 25/356 (7%)
Query: 20 FWDDGMLNHDTG--KGLFDTGFDPGFLEVLE----KHPENSDRIKNIVSILKRGPISPYI 73
FWD+ H G G+ G G ++ L+ ++PE R+KN++ + ++ +
Sbjct: 6 FWDETCFWHGGGHYAGMLPVG---GLVQPLDGGLPENPETKRRLKNLIEVTG---LAAEL 59
Query: 74 SWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSA 133
+ PA LL H Y++E AGG + T PG + A + G +A
Sbjct: 60 AMQGADPATRKDLLRVHPAHYLDEFKALSDAGGGELGRRTPFGPGGYEVAAQSAGLAKAA 119
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDV 192
+ VL G AY+L RPPGHH P +G+C LNN G+A++ A G + V+D DV
Sbjct: 120 LAAVLKGEVSNAYSLSRPPGHHCLPDYPNGFCLLNNIGIAIEAAKAEGLAQRFAVLDWDV 179
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGT 251
H+GNGT FY + VLT+SLH ++P + G + G+G G G+NLNIPLP GT
Sbjct: 180 HHGNGTEAVFYDRSDVLTVSLHQER-----NYPMDTGAFADRGKGNGAGFNLNIPLPPGT 234
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
G GY+ AM L +PAI+ F P+++++ G D++A DP GR T + + M R V +LA
Sbjct: 235 GHSGYLAAMQRLALPAIRNFAPDVLIIACGFDAAANDPLGRMLATAETFTMMTRQVMALA 294
Query: 312 DRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVK 367
G+LL+V EGGY TY +C H L+ ++ + DP A E FP++
Sbjct: 295 QDVCAGKLLMVHEGGYSETYVPFCGHNVLQEMVGSAIT-APDPFA-----EVFPLR 344
>gi|420239566|ref|ZP_14743875.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF080]
gi|398079774|gb|EJL70614.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF080]
Length = 372
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 174/338 (51%), Gaps = 25/338 (7%)
Query: 15 GIINVFWD--DGMLNHDTGKGLFDTGFDPGFLEVLEKHPEN---SDRIKNIVSILKRGPI 69
G + W+ + L HDTG T + PG +H EN R KN+V + +
Sbjct: 4 GSVRTGWNFHELYLWHDTGNAA--TWYPPGPTIEPGEHAENPATKRRFKNLVEV---SGL 58
Query: 70 SPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGGKMVCDGTVLNP---GSWGAAL 124
S ++ P L FHT DYI+ + + D+ G D + L P GS+ A
Sbjct: 59 SDRLARIDAEPVTEEDLALFHTRDYISRIKAMSGDRGG-----DASYLTPFGRGSFEIAC 113
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCG 183
L+ G T + + VL G YALVRPPGHHA+ G+C N +A+ A G G
Sbjct: 114 LSAGGTFAMVDAVLSGRVSNGYALVRPPGHHAEHDRGLGFCLFGNVPVAILKARKVHGMG 173
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNL 243
++ ID DVH+GNGT FY VLTIS+H G G E GEG G G+NL
Sbjct: 174 RIATIDWDVHHGNGTQSAFYADPDVLTISIHQERLFPG----DRGDRSERGEGPGEGFNL 229
Query: 244 NIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
NIPLP G+G Y+ A + V+PA+ +++P +IV+ G D+SA DP GR L D YREM
Sbjct: 230 NIPLPPGSGHGAYMAAFEQAVLPALARYKPELIVVSSGFDASAIDPFGRMMLHSDSYREM 289
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
R++ AD GGRL + EGGY +Y YC A LE
Sbjct: 290 ARLLMQAADTLCGGRLAMSHEGGYSASYVPYCGLAVLE 327
>gi|221640263|ref|YP_002526525.1| Histone deacetylase superfamily [Rhodobacter sphaeroides KD131]
gi|221161044|gb|ACM02024.1| Histone deacetylase superfamily [Rhodobacter sphaeroides KD131]
Length = 379
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 168/332 (50%), Gaps = 24/332 (7%)
Query: 20 FWDDGMLNHDTGK--------GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
FWD+ H G GL G L + PE R+KN++ + ++
Sbjct: 6 FWDERCFWHHGGNYALTLPVGGLVQPGGG------LPESPETKRRLKNLIEVTG---LAG 56
Query: 72 YISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
+ S PA +L H Y+ E GG + T + A L+ G
Sbjct: 57 ALRMQSASPASEEELRRVHPAAYLTEFKALSDRGGGELGLRTPFGRDGYETAALSAGLAT 116
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDI 190
+A++ VL G AYAL RPPGHH P +G+C L N +AV+ AL ++ V+D
Sbjct: 117 AALREVLRGRLANAYALSRPPGHHCLPDWPNGFCLLANIAIAVEAALAEQRAERIAVVDW 176
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT F +VLT+SLH ++P G + GEG G G NLNIPLP
Sbjct: 177 DVHHGNGTEAIFLSRPEVLTVSLHQER-----NYPLDTGGAEVRGEGPGHGANLNIPLPP 231
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
GTG RGY+ A+ LV+PA+++ P+ IV+ G D+SA DP GR + D +REM R ++
Sbjct: 232 GTGHRGYLEAIDRLVLPALRRHRPDAIVVACGFDASAMDPLGRMMASADTFREMTRRMKE 291
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
A GRL++V EGGY + +C HA LE
Sbjct: 292 AAADLCEGRLVLVHEGGYSEVHVPFCGHAVLE 323
>gi|169830473|ref|YP_001716455.1| histone deacetylase superfamily protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637317|gb|ACA58823.1| histone deacetylase superfamily [Candidatus Desulforudis
audaxviator MP104C]
Length = 331
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 181/342 (52%), Gaps = 30/342 (8%)
Query: 8 PPSPAA-EGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILK- 65
P PAA E + V +D L HDTG HPE+++R+++ + L
Sbjct: 15 PVQPAAREARLAVVYDPIYLEHDTGS-----------------HPESAERLRHATAALHA 57
Query: 66 --RGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAA 123
R + + A++ ++ H +Y+ ++ EA + G + + T + P S+ A
Sbjct: 58 AGRFERAALVRPRRATEAEVERV---HAAEYLADVREACRQGRRRLDPDTAVCPASYEVA 114
Query: 124 LLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GC 182
+ A G L+A++ V+DG A ALVRPPGHHA P + G+C NN +A + AL G
Sbjct: 115 MWAAGGALTALEVVMDGRFDRALALVRPPGHHALPARSMGFCLFNNVAVAARHALEVYGL 174
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYN 242
+++V+D D H+GNGT E FY +VL S+H +G +P G D +G GEG G+N
Sbjct: 175 ERILVVDWDFHHGNGTEEIFYEDPRVLFFSIHSRYG-----YPGTGHADRVGRGEGAGFN 229
Query: 243 LNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
+N+PLP+ GD G A E++VPA + P ++++ GQD DP G LT GY
Sbjct: 230 INVPLPDSAGDAGCEAAFREVLVPAAGDYRPELVMVSAGQDGYYADPLGGLGLTPAGYAR 289
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ +VR +A+ + GGR++ EGGYH+ A L L+ L
Sbjct: 290 LAGLVREIAEAHCGGRIVAALEGGYHLKGLAETLGVVLDAWL 331
>gi|11497747|ref|NP_068969.1| acetylpolyamine aminohydrolase [Archaeoglobus fulgidus DSM 4304]
gi|3024859|sp|O30107.1|Y130_ARCFU RecName: Full=Uncharacterized protein AF_0130
gi|2650515|gb|AAB91099.1| acetylpolyamine aminohydrolase (aphA) [Archaeoglobus fulgidus DSM
4304]
Length = 359
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 172/317 (54%), Gaps = 15/317 (4%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
HPE +R+ + L+ I S I A + +L HT +Y+ L K GG
Sbjct: 20 HPERRERLAYTMDQLREEGIFESERIVLLEPFKASLEDVLEVHTEEYVRFLEMESKKGGI 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ D T + G + ALLA G + A + VL+ + A+A++RPPGHHA+P + G+C+L
Sbjct: 80 IDFD-TNIPVGVFDRALLAAGGAIRAAQAVLNKECENAFAMIRPPGHHAKPYIGAGFCYL 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + V+ L G ++ ++D D H+G+GT E FY ++VL IS H P +P
Sbjct: 139 NNMAIMVKWLLKQGFERIAILDWDAHHGDGTQEIFYNDDRVLFISTHQM-----PLYPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G +E G G+G GY +NIPLP GTGD GY+ + E++ P + +F+P I + GQD+
Sbjct: 194 GYPEECGTGKGEGYTVNIPLPPGTGDEGYMMVIDEIIEPVVNEFKPQFIAISAGQDNHFT 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT----YSAYCLHATLEGV 343
DP LT GY EM R ++A+++ GRL+ V EGGY V Y+ + A + G
Sbjct: 254 DPITSLALTARGYAEMMRRAVAMAEKHCDGRLVAVLEGGYSVEGALPYTNLGIIAAMAG- 312
Query: 344 LNLPLALLSDPIAYYPE 360
L+ + +P Y PE
Sbjct: 313 --FDLSAIREPENYLPE 327
>gi|423119120|ref|ZP_17106804.1| hypothetical protein HMPREF9690_01126 [Klebsiella oxytoca 10-5246]
gi|376399766|gb|EHT12380.1| hypothetical protein HMPREF9690_01126 [Klebsiella oxytoca 10-5246]
Length = 371
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 178/331 (53%), Gaps = 13/331 (3%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE R+KN++ + ++ + G A L H Y+ +GG ++
Sbjct: 43 PETKRRMKNLMDV---AGLTAQLQLRGGAAAGEEDLRRIHPAHYLERFKAISDSGGGLLG 99
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+CFL N
Sbjct: 100 KEAPLGPGSYEIACLSAGLACAAVEAVLSGELDNAYSLSRPPGHHCLPDQSMGFCFLANI 159
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+AV+ A G GKV ++D DVH+GNGT + + VLTISLH + G + P +
Sbjct: 160 PIAVERAKARFGLGKVAILDWDVHHGNGTQHIYLHRDDVLTISLHQD-GCFPPGYAGE-- 216
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
++ G G G GYN+N+PL G GD + +A+ +V+PA+ +FEP++I++ G D++A DP
Sbjct: 217 -EDRGTGAGEGYNINVPLMAGAGDDSWRYALETIVLPALARFEPDLIIVACGYDANAMDP 275
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E + +
Sbjct: 276 LARMLLHSDSFRAMTERVQEAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGVKTE 335
Query: 350 LLSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
+ DP+ + + + + E+ ++Q I
Sbjct: 336 -VEDPLLAFIQQQ----QPREAFTRFQRQAI 361
>gi|253990107|ref|YP_003041463.1| histone deacetylase family protein [Photorhabdus asymbiotica]
gi|253781557|emb|CAQ84720.1| histone deacetylase family protein [Photorhabdus asymbiotica]
Length = 370
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 181/331 (54%), Gaps = 10/331 (3%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE R+KN++ + S + I Q L H Y+ E + GG M+
Sbjct: 43 PETKRRLKNLMDVSGLSHSLHLSSAST-IDEQT--LRKIHPEKYLKEFKQISDNGGGMLG 99
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
L PGS+ A L+ +A++ VL G AY+L RPPGHH P + G+CFL N
Sbjct: 100 IEAPLGPGSYEIAKLSASLACAAVETVLSGELDNAYSLSRPPGHHCLPDKSMGFCFLANI 159
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
LA++ A +V VID DVH+GNGT ++ + VLTIS+H + G + P +
Sbjct: 160 PLAIEQAKARFDLKRVAVIDWDVHHGNGTQHIYWNRSDVLTISIHQD-GCFPPGYSGE-- 216
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
D++GEGEG GYNLNIPL G G Y++AMT++V+PA+++F+P +I++ G D++A DP
Sbjct: 217 -DDIGEGEGTGYNLNIPLLAGAGHNSYIYAMTQIVLPALKRFKPELIIVACGYDANAVDP 275
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
R L + +REM ++V+ AD G+L++V EGGY +Y +C A LE + +
Sbjct: 276 LARMQLHSESFREMTQLVQQTADSLCDGKLVVVHEGGYAESYVPFCGLAVLEQMSGIRTK 335
Query: 350 LLSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
+ DP+ + + P E +Q Q D +
Sbjct: 336 -VKDPMLDFIRLQQ-PRAEFELFQQQQLDKL 364
>gi|37526255|ref|NP_929599.1| hypothetical protein plu2353 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785685|emb|CAE14646.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 370
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 166/292 (56%), Gaps = 8/292 (2%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE R+KN++ + +S + S P L H +Y+ + GG M+
Sbjct: 43 PETKRRLKNLMDVSG---LSHSLHLSSASPIDEQTLRKIHPEEYLKQFKRVSDNGGGMLG 99
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
L PGS+ A L+ +A++ VL G AY+L RPPGHH P G+CFL N
Sbjct: 100 IEASLGPGSYEIAKLSASLACAAVEAVLSGELDNAYSLSRPPGHHCLPDKPMGFCFLANI 159
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
LA++ A +V VID DVH+GNGT ++ + VLTIS+H + G + P +
Sbjct: 160 PLAIEQAKARFDLKRVAVIDWDVHHGNGTQHIYWDRSDVLTISIHQD-GCFPPGYSGE-- 216
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
D++GEGEG GYNLNIPL G G Y++AMT++V+PA+++F+P +I++ G D++A DP
Sbjct: 217 -DDIGEGEGTGYNLNIPLLAGAGHNSYIYAMTQIVLPALERFKPELIIVACGYDANAMDP 275
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
R L + +REM ++V+ AD G+L++V EGGY +Y +C A LE
Sbjct: 276 LARMQLHSESFREMTQLVQQAADSLCDGKLVVVHEGGYAESYVPFCGLAVLE 327
>gi|221632213|ref|YP_002521434.1| histone deacetylase family protein [Thermomicrobium roseum DSM
5159]
gi|221156465|gb|ACM05592.1| histone deacetylase family protein [Thermomicrobium roseum DSM
5159]
Length = 319
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 167/298 (56%), Gaps = 12/298 (4%)
Query: 50 HPENSDRIKNIVSILKR-GPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
HPE R++ I+ +L+R G + P I PA + H YI EL E GG
Sbjct: 22 HPERPARLEAILQLLERTGRLDNRPVIEPD---PADEETIALIHDRAYIVELREFAARGG 78
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T+++P S+ A LAVG + A++ VL G + +AL+RPPGHHA+P G+C
Sbjct: 79 GWLDADTIVSPRSFEVARLAVGAVVQAVESVLSGQARRVFALIRPPGHHAEPERGMGFCL 138
Query: 167 LNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
NN +A Q AL G ++ +ID DVH+GNGT FYR+++V +SLH W P +P
Sbjct: 139 FNNIAVAAQYALERYGLRRIAIIDWDVHHGNGTQAAFYRTDRVFFVSLH----QW-PLYP 193
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G +E+GEG G GY LNIPL G+ D+ Y+ A + P + + P ++++ G D+
Sbjct: 194 GTGRAEEIGEGPGRGYTLNIPLAPGSDDQVYLAAFANEIEPRLAAYRPELVMVSAGYDAH 253
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
DP +T G+ M VR++A+ + GRL++ EGGY+++ A + ATL+ +
Sbjct: 254 YADPLAAMAVTEHGFAAMASQVRAIAEVWCDGRLVLALEGGYNLSALASSVAATLDAL 311
>gi|70730725|ref|YP_260466.1| histone deacetylase [Pseudomonas protegens Pf-5]
gi|68345024|gb|AAY92630.1| histone deacetylase family protein [Pseudomonas protegens Pf-5]
Length = 377
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 170/310 (54%), Gaps = 6/310 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S++ ++ + S A LL H+ Y+ AGG +
Sbjct: 43 HAESPETKRRLKSLMDVSGLTRQLHLRSAAAATEDDLLRVHSAAYLQRFKALSDAGGGHL 102
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D + PGS+ A L+ G ++A+ VL G AY+L RPPGHH A G+CFL N
Sbjct: 103 GDEAPVGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCTRDQAMGFCFLAN 162
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G GKV VID DVH+GNGT F VLT+SLH + G P G
Sbjct: 163 IAIAIEAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQD----GCFPPGYG 218
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+ G G G G N+NIPL G+G Y++AM +V+PA+++FEP +I++ G D++A D
Sbjct: 219 GEQDRGRGAGLGCNINIPLLPGSGHDAYLYAMQHIVIPALERFEPELIIVACGYDANAVD 278
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D +REM + ++ A+R GRL++V EGGY Y +C ATLE + +
Sbjct: 279 PLARMLLHSDSFREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFCGLATLEALSGIRT 338
Query: 349 ALLSDPIAYY 358
A ++DP+ +
Sbjct: 339 A-VADPMLEF 347
>gi|381209320|ref|ZP_09916391.1| histone deacetylase superfamily protein [Lentibacillus sp. Grbi]
Length = 368
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 163/297 (54%), Gaps = 10/297 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
++PE R+KN++ K I S +I S D I EL +A GG
Sbjct: 38 ENPETKRRVKNLLEHSKYIENLHQIGPRSATRDEIGMNHSMAYADRIKELSDA---GGGD 94
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
++ P S+ AL + G L++++ V++ + AYALVRPPGHHA+P G+C N
Sbjct: 95 AGVHAIVGPDSYEIALKSAGGVLTSVETVMEEKAQNAYALVRPPGHHAEPEEGMGFCLFN 154
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ- 226
N +A + A G +++++D DVH+GNGT F VL +S+H + P+
Sbjct: 155 NVAIAAKYARQKYGLKRILILDWDVHHGNGTERAFENDTDVLFMSVHQEN-----IFPKG 209
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G + G+G G GYN+NI LP GTGD GY++A EL+ P I ++ P +I + GQD+S
Sbjct: 210 RGDITYTGKGNGEGYNVNIELPAGTGDEGYLYAFDELIEPIIDQYAPELIFISAGQDASR 269
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
FDP GR +T DGY +M V+ LA+++S GRL+ EGGY Y +C +E +
Sbjct: 270 FDPIGRMLVTADGYYQMASRVKKLAEKHSNGRLVAAHEGGYSTAYVPFCTLRVIEAL 326
>gi|307545468|ref|YP_003897947.1| histone deacetylase superfamily protein [Halomonas elongata DSM
2581]
gi|307217492|emb|CBV42762.1| histone deacetylase superfamily [Halomonas elongata DSM 2581]
Length = 375
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 177/326 (54%), Gaps = 9/326 (2%)
Query: 20 FWDDGMLNHDTGK-GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
FW + HD G G+F + D + + PE+ R+KN++ + G I +G
Sbjct: 13 FWHERCFWHDPGAIGVFASLGDYRQPQPASESPESKRRLKNLLEV--SGLIDELEVRKAG 70
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
P +I L FHT Y++ L D+ G +G PGS AA +VG ++A++ V
Sbjct: 71 -PVEIEDLRRFHTGAYLDRLEAGDRERGGDAGEGAPYLPGSLAAARQSVGLAVAAVEAVA 129
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNG 197
G AYAL RPPGHHA+ G+C L N +AV A G +VV++D DVH+GNG
Sbjct: 130 RGRLSNAYALCRPPGHHAEADRGRGFCLLGNIPVAVMRARALGLVRRVVILDWDVHHGNG 189
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
FY +VLT+S+H + G + G +E G+G G G NLN+PLP G G Y
Sbjct: 190 QQAAFYADPEVLTVSVHQD----GNYPLETGAFEEQGKGPGLGANLNLPLPPGCGLGAYE 245
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+AM LV+PAI+ F P+++V+ G D+ A DP G+ L + EM R + +L +R G
Sbjct: 246 YAMRSLVLPAIEAFAPDLVVVACGYDACAKDPLGKMMLNSRAFGEMTRELVALTERLCDG 305
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGV 343
RL++V EGGY Y +C HA ++ +
Sbjct: 306 RLVMVHEGGYSEGYVPFCGHAVIQAL 331
>gi|254460169|ref|ZP_05073585.1| histone deacetylase family protein [Rhodobacterales bacterium
HTCC2083]
gi|206676758|gb|EDZ41245.1| histone deacetylase family protein [Rhodobacteraceae bacterium
HTCC2083]
gi|297184466|gb|ADI20581.1| hypothetical protein [uncultured alpha proteobacterium
EB080_L84F03]
Length = 370
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 168/331 (50%), Gaps = 20/331 (6%)
Query: 20 FWDDGMLNHDTGK--------GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
FWD+ H G GL + G L + PE+ R KN++ + +S
Sbjct: 6 FWDESCFWHSGGNYASMMPVGGLIQPMVNGG----LPESPESKRRFKNLMDMTG---LSG 58
Query: 72 YISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
++ PA LL H Y++ E GG + + PG + A + G
Sbjct: 59 ELAMQGATPASREDLLRVHPASYLDAFKEMSDTGGGEIGERCPFGPGGYDIAATSAGLAK 118
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDI 190
+A++ VL G + AY+L RPPGHH P G+C L N +A++ AL G K V VID
Sbjct: 119 AALEAVLKGELQNAYSLSRPPGHHCLPEQPMGFCLLANISIAIESALAKGLAKRVAVIDW 178
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT +Y VLTIS+H + P ++ G+G G G NLN+PLP G
Sbjct: 179 DVHHGNGTEAIYYDRGDVLTISIHQENNF----PPVTSGFEDRGKGAGEGCNLNVPLPPG 234
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
G Y+ M +V+P ++ ++P++I++ G D+++ DP R T D +R++ R V +L
Sbjct: 235 AGHASYLEVMETIVIPQMRAYQPDVIIVACGFDATSVDPLARMMATADTFRQLTRQVMTL 294
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
AD GR+++ EGGY Y +C HA L+
Sbjct: 295 ADEICEGRVMMAHEGGYSEVYVPFCGHAVLQ 325
>gi|374333861|ref|YP_005090548.1| histone deacetylase superfamily protein [Oceanimonas sp. GK1]
gi|372983548|gb|AEX99797.1| histone deacetylase superfamily protein [Oceanimonas sp. GK1]
Length = 368
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 177/321 (55%), Gaps = 15/321 (4%)
Query: 26 LNHDTGK-GLFDTGFDPGFLE--VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQ 82
L HD G +FD GF++ +HPE R++N++++ + ++ + PA
Sbjct: 13 LWHDAGPCSVFDR--PGGFVQPAAAAEHPETKRRLRNLLAV---SGLLEQLTPVNAAPAA 67
Query: 83 IPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
LL FHT YI+EL + G ++ A + G ++ + VL+G
Sbjct: 68 REDLLRFHTERYIDELSVMSEQGFGDAGQYAPFRQDAFPIACRSAGLAMATVAAVLNGEV 127
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEG 201
Y L RPPGHHA+ G+C L N +A++ A G +V VID DVH+GNGT +
Sbjct: 128 DNGYCLSRPPGHHAEADRGMGFCLLGNIPIAIRAAQAQGLVRRVAVIDWDVHHGNGTQQA 187
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQ-NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
FY +VLT+SLH ++ ++P +G+ +E G G GFGYNLN+PLP G+G Y+ AM
Sbjct: 188 FYEDAEVLTLSLHHDN-----NYPVGSGSAEERGSGAGFGYNLNVPLPAGSGIGTYLAAM 242
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+LV+PA+ +F+P +IV+ G D+SA DP G L D + ++ V + ADR GRL+
Sbjct: 243 DQLVIPALDRFKPELIVVACGFDASAMDPLGCMLLNADAFGQLTANVMAAADRLCRGRLV 302
Query: 321 IVQEGGYHVTYSAYCLHATLE 341
+V EGGY Y +C H +E
Sbjct: 303 MVHEGGYSEGYVPFCGHRVIE 323
>gi|340355936|ref|ZP_08678604.1| histone deacetylase [Sporosarcina newyorkensis 2681]
gi|339621864|gb|EGQ26403.1| histone deacetylase [Sporosarcina newyorkensis 2681]
Length = 377
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 189/369 (51%), Gaps = 21/369 (5%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLE--VLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+D+ HD G G G+++ + PE R KN++ I P I+ S
Sbjct: 8 YDESYFWHDNGSGALHLA-SGGWVQSHTYGEDPETKRRFKNLMDISGLTPQLKSIAPRSA 66
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
I FH P Y++++ + A G ++ GS+ ALL+ G ++A+ V+
Sbjct: 67 TRDDIEL---FHLPSYVDKVKQLSAANGGDAGQIAIVGRGSYEIALLSAGGAMTAVDAVM 123
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNG 197
DG + YAL RPPGHHA+ G+C NN +A + A +++V+D DVH+GNG
Sbjct: 124 DGDVQNVYALTRPPGHHAEAQEGMGFCLFNNVAIAAKHAKKKYNLERILVLDWDVHHGNG 183
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + FY L IS+H + P+ + G ++ G+G+G GYN+NIPLP GTG+ GY+
Sbjct: 184 TEQAFYDDESTLFISIHQDR--LFPA--ERGYIEHCGQGKGEGYNVNIPLPAGTGNAGYM 239
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
HA ++V P + +F+ +I++ GQD S FDP R +T +G+ ++ LA+++ G
Sbjct: 240 HAFEKIVGPIVDQFKSELIIVSAGQDPSFFDPLARMMVTANGFYRFAEFMKKLAEKHCDG 299
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI---------AYYPEDEAFPVKV 368
RL++ EGGY Y +C A +E + + + DP +P +E V
Sbjct: 300 RLVLCHEGGYSAAYVPFCSLAIVEAMSEIKTE-VDDPFMEGFGVPVETLFPHEEQAVQAV 358
Query: 369 IESIKQYQN 377
I+ ++ N
Sbjct: 359 IDQQSKFWN 367
>gi|126463219|ref|YP_001044333.1| histone deacetylase superfamily protein [Rhodobacter sphaeroides
ATCC 17029]
gi|126104883|gb|ABN77561.1| histone deacetylase superfamily [Rhodobacter sphaeroides ATCC
17029]
Length = 379
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 171/333 (51%), Gaps = 26/333 (7%)
Query: 20 FWDDGMLNHDTGK--------GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
FWD+ H G GL G L + PE R+KN++ + ++
Sbjct: 6 FWDERCFWHHGGNYALTLPVGGLVQPGAG------LPESPETKRRLKNLIEVTG---LAG 56
Query: 72 YISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
+ PA +L H Y+ +D+ GG++ G + A L+ G
Sbjct: 57 ALRMQGAPPASEEELRRVHPAAYLTAFKALSDRGGGELGLRSPFGRDG-YETAALSAGLA 115
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
+A++ VL+G AYAL RPPGHH P +G+C L N +AV+ AL ++ V+D
Sbjct: 116 TAALREVLEGRLANAYALSRPPGHHCLPDWPNGFCLLANIAIAVEAALAEKRAERIAVVD 175
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLP 248
DVH+GNGT F +VLT+SLH ++P G + GEG G G NLNIPLP
Sbjct: 176 WDVHHGNGTEAIFLSRPEVLTVSLHQER-----NYPLDTGGAEVRGEGPGHGANLNIPLP 230
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
GTG RGY+ AM LV+PA+++ P+ IV+ G D+SA +P GR + D +REM R ++
Sbjct: 231 PGTGHRGYLEAMDRLVLPALRRHRPDAIVVACGFDASAMEPLGRMMASADTFREMTRRMK 290
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
A GRL++V EGGY + +C HA LE
Sbjct: 291 EAAADLCEGRLVLVHEGGYSEVHVPFCGHAVLE 323
>gi|444375680|ref|ZP_21174933.1| Deacetylase [Enterovibrio sp. AK16]
gi|443680183|gb|ELT86830.1| Deacetylase [Enterovibrio sp. AK16]
Length = 370
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 187/339 (55%), Gaps = 16/339 (4%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
FW H+TG+ PG +KH EN++ + ++++L ++ ++
Sbjct: 13 FW------HNTGEAA--AFLPPGLTIQPDKHAENAETKRRLLNLLNVAGLADSLTTIPPR 64
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
A LLSFHT YI+ + E A G + T PGS+ AL+++G L AM +++
Sbjct: 65 LANNNDLLSFHTQAYIDSIREMSDANGGDAGELTPFGPGSYEIALMSLGGCLEAMDRMME 124
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGT 198
GH AY LVRPPGHHA+P M G+C N + A + G G++ ++D DVH+GN
Sbjct: 125 GHVDNAYCLVRPPGHHAEPEMGRGFCIFGNGVITANYARDVHGMGRIAIVDWDVHHGNSQ 184
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG--YNLNIPLPNGTGDRGY 256
FY+ + VLTIS+H + ++ P P +G ++E G+G+G G YN+N+PLP G+GD Y
Sbjct: 185 QGAFYQDSGVLTISIHQD--NFYP--PMSGALEERGKGKGEGEGYNINVPLPPGSGDGAY 240
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
A ++V+PA++ ++P +I++ G D SA DP GR T + YR M + + A++
Sbjct: 241 RKAFEDVVLPALEAYQPELIIVSSGFDGSAIDPLGRNMATSETYRYMTESLVAAAEKLCH 300
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
G LL + EGGY Y YC A +E + L L DP
Sbjct: 301 GHLLCIHEGGYSTAYVPYCGLAVMEALSGLKTE-LEDPF 338
>gi|146276430|ref|YP_001166589.1| histone deacetylase superfamily protein [Rhodobacter sphaeroides
ATCC 17025]
gi|145554671|gb|ABP69284.1| histone deacetylase superfamily [Rhodobacter sphaeroides ATCC
17025]
Length = 365
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 169/332 (50%), Gaps = 24/332 (7%)
Query: 20 FWDDGMLNHDTGK--------GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
FWD+ H G GL G L + PE R+KN++ + +S
Sbjct: 6 FWDERCFWHHGGNYALTLPVGGLVQPGGG------LPESPETKRRLKNLLDVTG---LSG 56
Query: 72 YISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
+ PA +L H Y+ E GG + T + A L+ G
Sbjct: 57 ELRMLHAAPATEEELRLVHPQGYLAEFKALSDRGGGELGLRTPFGRDGYEVAALSAGLAT 116
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDI 190
+A++ VL+G AYAL RPPGHH P +G+C L N +AV++AL +V V+D
Sbjct: 117 AALRQVLEGRLANAYALSRPPGHHCLPDWPNGFCLLANIAIAVEVALAERRAERVAVVDW 176
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT F VLTISLH ++P G + GEG G G N+NIPLP
Sbjct: 177 DVHHGNGTEAIFLTRPDVLTISLHQER-----NYPLDTGGAEMRGEGAGLGANMNIPLPP 231
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
GTG RGY+ AM LV+PA+++ P+++V+ G D+ A DP GR + + +R + R+++
Sbjct: 232 GTGHRGYLEAMERLVLPALRRHRPDVLVVACGFDAGALDPLGRMLASAETFRALTRMMKE 291
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
A GGRL++V EGGY + +C HA LE
Sbjct: 292 TAADLCGGRLVLVHEGGYSEVHVPFCGHAVLE 323
>gi|221198226|ref|ZP_03571272.1| histone deacetylase family protein [Burkholderia multivorans CGD2M]
gi|221209192|ref|ZP_03582184.1| histone deacetylase family protein [Burkholderia multivorans CGD2]
gi|221170930|gb|EEE03385.1| histone deacetylase family protein [Burkholderia multivorans CGD2]
gi|221182158|gb|EEE14559.1| histone deacetylase family protein [Burkholderia multivorans CGD2M]
Length = 373
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 162/307 (52%), Gaps = 6/307 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAQLDMRGAAPAAREDLLRIHPAGYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+D A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIAAVDAVVDERAANAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G G+V VID DVH+GNGT +Y LTISLH + P G
Sbjct: 158 IPIAIEAARAKHGIGRVAVIDWDVHHGNGTQSIYYDDADTLTISLHQDRCF----PPGYG 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
++ G G G G NLN+PL G+GD Y HA +V+PA+++F P +IV+ G D+SA D
Sbjct: 214 GAEDRGAGAGIGANLNVPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + +
Sbjct: 274 PLARMLLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGVRT 333
Query: 349 ALLSDPI 355
A ++DP+
Sbjct: 334 A-VADPM 339
>gi|298244138|ref|ZP_06967944.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
gi|297551619|gb|EFH85484.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
Length = 386
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 172/327 (52%), Gaps = 32/327 (9%)
Query: 39 FDPGFLEVL--EKHPENSDRIKNIVSILKRGPISPYISWHSG--------IPAQIPQLLS 88
+DP FLE + E+HPE R+ + +L+ + W A + +L +
Sbjct: 7 YDPIFLEHITPEQHPERPQRLDESMQLLQA------LKWFERDDLVQLQPRAATVDELAT 60
Query: 89 FHTPDYINELVEADKAGGKMVCDG----------TVLNPGSWGAALLAVGTTLSAMKHVL 138
H +YI E+ A K ++ G T ++ ++ AAL A G L+A+ +L
Sbjct: 61 VHEREYIQEVEAASKKAAEIEASGGRNTQFFATDTYVSAKTYEAALKAAGAPLTAIDALL 120
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNG 197
G K AY LVRPPGHHA A G+C NN +A + AL G +V++ID DVH+GNG
Sbjct: 121 KGEIKNAYCLVRPPGHHAVAESAMGFCIFNNVAVAARYALEKHGLERVMIIDYDVHHGNG 180
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T E FY +VL S+H P +P G ELGEGEG G +N+PLP TG Y
Sbjct: 181 TQEMFYNDPRVLYFSVHQ-----APFYPGTGASTELGEGEGLGTTINVPLPARTGFHVYD 235
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+++VPA+ +F+P +I++ G D+ DP G L+ + ++ R++ A+R G
Sbjct: 236 SIFRQVMVPAMDRFDPQLILVSAGFDAHWDDPIGDMYLSTSAFYQLNRVILEYAERICDG 295
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVL 344
R+++VQEGGY ++ C+ ++ ++
Sbjct: 296 RVIMVQEGGYSISALENCVSTSINQLM 322
>gi|300721420|ref|YP_003710691.1| Histone deacetylase-like amidohydrolase [Xenorhabdus nematophila
ATCC 19061]
gi|297627908|emb|CBJ88454.1| Histone deacetylase-like amidohydrolase (HDAC-like amidohydrolase)
(HDAH) [Xenorhabdus nematophila ATCC 19061]
Length = 371
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 7/294 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S++ ++ + + P L HT +Y+ +G ++
Sbjct: 40 HAESPETKRRMKSLMDVSGLTRSLHLRNAEPLDDATLKLVHTEEYLQRFKSVSDSGAGIL 99
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G T +A+K VL+ AY+L RPPGHH P A G+C L N
Sbjct: 100 GPEASIGQGSYEIAKLSAGLTYAAVKAVLEDELDNAYSLSRPPGHHCLPDQAMGFCLLAN 159
Query: 170 AGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
LA++ A G G+V V+D DVH+GNGT F+ + VLTISLH + +P+
Sbjct: 160 IALAIEHAKEKLGVGRVAVLDWDVHHGNGTQHIFWERDDVLTISLHQD-----GCYPEGY 214
Query: 229 TVDE-LGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+ +E +G G+G G+N+NIPL G G Y++AM ++V+PA+Q+++P +I++ G D++A+
Sbjct: 215 SGEEDIGAGKGEGFNINIPLMAGAGHNSYLYAMDQIVLPALQRYQPELIIVACGYDANAY 274
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L D +REM R ++ AD G+L++V EGGY Y +C A +E
Sbjct: 275 DPLARMQLHSDSFREMTRKIQQAADELCHGKLVMVHEGGYAEAYVPFCGLAVME 328
>gi|77464377|ref|YP_353881.1| deacetylase [Rhodobacter sphaeroides 2.4.1]
gi|77388795|gb|ABA79980.1| deacetylase / probable acetylpolyamine aminohydrolase [Rhodobacter
sphaeroides 2.4.1]
Length = 379
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 170/333 (51%), Gaps = 26/333 (7%)
Query: 20 FWDDGMLNHDTGK--------GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
FWD+ H G GL G L + PE R+KN++ + ++
Sbjct: 6 FWDERCFWHHGGNYALTLPVGGLVQPGGG------LPESPETKRRLKNLLDVTG---LAG 56
Query: 72 YISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
+ PA +L H Y+ +D+ GG++ G + A L+ G
Sbjct: 57 ALRMQGAPPASEEELRRVHPAAYLTAFKALSDRGGGELGLRSPFGRDG-YETAALSAGLA 115
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
+A++ VL G AYAL RPPGHH P +G+C L N +AV+ AL ++ V+D
Sbjct: 116 TAALREVLRGRLANAYALSRPPGHHCLPDWPNGFCLLANIAIAVEAALAEQRAERIAVVD 175
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLP 248
DVH+GNGT F +VLT+SLH ++P G + GEG G G NLNIPLP
Sbjct: 176 WDVHHGNGTEAIFLSRPEVLTVSLHQER-----NYPLDTGGAEVRGEGPGHGANLNIPLP 230
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
GTG RGY+ AM LV+PA+++ P+ IV+ G D+SA DP GR + D +REM R ++
Sbjct: 231 PGTGHRGYLEAMDRLVLPALRRHRPDAIVVACGFDASAMDPLGRMMASADTFREMTRRMK 290
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
A GRL++V EGGY + +C HA LE
Sbjct: 291 EAAADLCEGRLVLVHEGGYSEVHVPFCGHAVLE 323
>gi|429206068|ref|ZP_19197336.1| Deacetylase [Rhodobacter sp. AKP1]
gi|428190789|gb|EKX59333.1| Deacetylase [Rhodobacter sp. AKP1]
Length = 379
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 169/333 (50%), Gaps = 26/333 (7%)
Query: 20 FWDDGMLNHDTGK--------GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
FWD+ H G GL G L + PE R+KN++ + ++
Sbjct: 6 FWDERCFWHHGGNYALTLPVGGLVQPGAG------LPESPETKRRLKNLLDVTG---LAG 56
Query: 72 YISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
+ PA +L H Y+ +D+ GG++ G + A L+ G
Sbjct: 57 ALRMQGAPPASEEELRRVHPAAYLTAFKALSDRGGGELGLRSPFGRDG-YETAALSAGLA 115
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
+A++ VL G AYAL RPPGHH P +G+C L N +AV+ AL ++ V+D
Sbjct: 116 TAALREVLRGRLANAYALSRPPGHHCLPDWPNGFCLLANIAIAVEAALAEQRAERIAVVD 175
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLP 248
DVH+GNGT F +VLT+SLH ++P G + GEG G G NLNIPLP
Sbjct: 176 WDVHHGNGTEAIFLSRPEVLTVSLHQER-----NYPLDTGGAEVRGEGPGHGANLNIPLP 230
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
GTG RGY+ AM LV+PA+++ P+ IV+ G D+SA DP GR + D +REM R +
Sbjct: 231 PGTGHRGYLEAMDRLVLPALRRHRPDAIVVACGFDASAMDPLGRMMASADTFREMTRRMT 290
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
A G RL++V EGGY + +C HA LE
Sbjct: 291 EAAADLCGNRLVLVHEGGYSEVHVPFCGHAVLE 323
>gi|429211097|ref|ZP_19202263.1| putative acetylpolyamine aminohydrolase [Pseudomonas sp. M1]
gi|428158511|gb|EKX05058.1| putative acetylpolyamine aminohydrolase [Pseudomonas sp. M1]
Length = 370
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 174/336 (51%), Gaps = 19/336 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+++ + + S++ +S + S A LL H DY+ AG +
Sbjct: 39 HAESAESKRRLKSLMDVSGLSAKLKLSSAPLASEEDLLRVHPLDYLQRFKAMSDAGHGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ ++ PG++ A + G ++A+ VL G AYAL RPPGHH G+C+L N
Sbjct: 99 GEEAMVGPGTYEIARQSAGLAIAAVDAVLSGELDNAYALSRPPGHHCLADRGMGFCYLAN 158
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ-N 227
+AV+ A G +V V+D DVH+GNGT FY + VL++S+H P +
Sbjct: 159 IAVAVEAAKARHGIRRVAVLDWDVHHGNGTQSIFYGRDDVLSLSIHQ-----ADCFPVGS 213
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G V+E GEG G G N+N+PL G+GD Y HAM ++VPA+++F P +IV+ G D++
Sbjct: 214 GAVEEQGEGAGLGANVNVPLYPGSGDDAYRHAMERIIVPALERFRPELIVVACGFDANGV 273
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE---GVL 344
DP R + +R + R VR A+R GRL++V EGGY Y +C HA +E GV
Sbjct: 274 DPLARMLAHSETFRALTRSVREAAERLCDGRLVLVHEGGYAEAYVPFCGHAVIEELAGVA 333
Query: 345 N------LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
LP+ P A + AF + IE + Q
Sbjct: 334 TEVVDPFLPMLEGQQPDADF---RAFQRQAIERMAQ 366
>gi|149375683|ref|ZP_01893452.1| histone deacetylase superfamily protein [Marinobacter algicola
DG893]
gi|149360085|gb|EDM48540.1| histone deacetylase superfamily protein [Marinobacter algicola
DG893]
Length = 368
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 185/342 (54%), Gaps = 16/342 (4%)
Query: 17 INVFWDDGMLNH--DTGKGLFDTGFDPGFLEVLE------KHPENSDRIKNIVSILKRGP 68
+ VF+D+ +L H DT D +L K+PE+ RI I+ +L R P
Sbjct: 7 VTVFYDERVLAHHPDTNMDFLPGRLDKRVRSILSGLNVQWKYPEHPGRITAIMDLLAREP 66
Query: 69 ISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVG 128
I P + G A QL HT +++++ + D T ++PGS AA +A G
Sbjct: 67 I-PGVRIEPGKAATPDQLRRVHTTSFLDDIFSLRDESAWLDVDTTAVSPGSVEAAEVAAG 125
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
T ++A++ V++G A+A+VRPPGHHA+P A G+C NN +A A GC +V++
Sbjct: 126 TAIAAVEAVVEGRTNSAFAMVRPPGHHAEPVRARGFCLFNNVAVAAAHAQAELGCERVLI 185
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
+D D H+GNGT + F+ + +H P +P +G + ++G G G G +N+P+
Sbjct: 186 VDWDAHHGNGTQDIFWADPDTMFFDIHRA----APFYPGSGALTDVGAGLGEGTTINVPM 241
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
P G GD Y+ A+ E++VPA F+P+++++ G D+ +D ++ +G+ M IV
Sbjct: 242 PGGAGDVAYLKALREILVPAADYFKPDLVLVSAGFDAHWYDLA--LNVSYEGFAAMTGIV 299
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
+ +AD++ GRL +V EGGY+ ++ +HA L + LA
Sbjct: 300 QEIADKHCNGRLAMVLEGGYNTESLSHGVHAVLRALAGGTLA 341
>gi|349575998|ref|ZP_08887894.1| histone deacetylase [Neisseria shayeganii 871]
gi|348012433|gb|EGY51384.1| histone deacetylase [Neisseria shayeganii 871]
Length = 374
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 177/329 (53%), Gaps = 23/329 (6%)
Query: 21 WDDGMLNHDTGK--GLFDTGFDPGFLEVLEKHPENSDRIKNIVSI------LKRGPISPY 72
W + + HDT GL+ G L+ E PE RI+N++ + L+R ++P
Sbjct: 8 WHELYMWHDTSTYAGLYRPGLTVQPLQHYES-PEPKRRIRNLLEVSGLLDQLRR--VAP- 63
Query: 73 ISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLS 132
A LL HT DY+ + EA + + + S A A G +S
Sbjct: 64 ------ADAGDADLLRVHTADYLAK-TEAARGQNGLADAESPFGAASIDIARKAAGGAIS 116
Query: 133 AMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDV 192
A+K VL G AYAL+RPPGHHA+P G+C +NA +A AL++GC +V +ID DV
Sbjct: 117 AVKAVLAGQADNAYALIRPPGHHAEPDAGGGFCIFSNAAVAAAWALDNGCERVAIIDWDV 176
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
H+GNGT F+ +VL +SLH + +W P + G ++G G G G N+N+PL G G
Sbjct: 177 HHGNGTESCFWEEGRVLAVSLHQD--NWFPQN--RGAHTDVGAGAGLGKNMNLPLMPGCG 232
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
YV+A ++V+PA++ F P++I++ G DSS DP GR L D YR + ++V AD
Sbjct: 233 HGAYVYAFEQIVLPALEAFRPDLIMVACGFDSSIEDPLGRMLLHADSYRALTQMVLDAAD 292
Query: 313 RYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
R GGRL+ EGGY+ + + A +E
Sbjct: 293 RLCGGRLVFTHEGGYNPATTPFLGLAVVE 321
>gi|421469818|ref|ZP_15918251.1| histone deacetylase family protein [Burkholderia multivorans ATCC
BAA-247]
gi|400229051|gb|EJO58926.1| histone deacetylase family protein [Burkholderia multivorans ATCC
BAA-247]
Length = 373
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 162/307 (52%), Gaps = 6/307 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAQLDMRGAAPAAREDLLRIHPAGYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+D A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIAAVDAVVDERAANAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G G+V VID DVH+GNGT +Y LTISLH + P G
Sbjct: 158 IPIAIEAARAKHGIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYG 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
++ G G G G NLN+PL G+GD Y HA +V+PA+++F P +IV+ G D+SA D
Sbjct: 214 GAEDRGAGAGIGANLNVPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A ++ + +
Sbjct: 274 PLARMLLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVDELAGVRT 333
Query: 349 ALLSDPI 355
A ++DP+
Sbjct: 334 A-VADPM 339
>gi|428166114|gb|EKX35096.1| hypothetical protein GUITHDRAFT_160215 [Guillardia theta CCMP2712]
Length = 380
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 167/296 (56%), Gaps = 13/296 (4%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE+ RI +++ + G + + S +PA + ++L H+ +Y+ +L E + G
Sbjct: 41 PESKRRIHSLLQV--SGLLKETVPIDS-LPATLDEVLRVHSQEYLTKLTELSECEGGDAG 97
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D +PG G ALLA G+ +S + VLD Y L+RPPGHHA+ G+C LNN
Sbjct: 98 DCAPFSPGGLGIALLAAGSAISMVNAVLDERIVNGYCLLRPPGHHAERDRGRGFCLLNNI 157
Query: 171 GLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNG 228
+A + A+ G ++V+ID DVH+GNGT + FY S+KV+ IS+H + ++P +G
Sbjct: 158 AIAAKHAIEVRGLERIVIIDWDVHHGNGTQQAFYDSDKVMFISIHQDR-----NYPLDSG 212
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKF---EPNMIVLVVGQDSS 285
DELG+G G G+N N+PLP G+GD Y A+ A F +P +I++ G D S
Sbjct: 213 FADELGQGLGLGFNCNLPLPPGSGDGAYREAIRAACSLAETSFGDEKPQLIMISCGFDCS 272
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
FDP G + +R + + V+ LADR G+L+++ EGGY Y+ +C A +E
Sbjct: 273 FFDPLGSMMCHSETFRYLTQQVKELADRCCSGKLILLHEGGYSEVYAPFCGLAVME 328
>gi|405375535|ref|ZP_11029564.1| Acetylspermidine deacetylase [Chondromyces apiculatus DSM 436]
gi|397086166|gb|EJJ17301.1| Acetylspermidine deacetylase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 341
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 167/302 (55%), Gaps = 12/302 (3%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG + HPE+ R++ I+ +L P+ + + A +L + HTP+ + L
Sbjct: 16 DPG-----QGHPESPSRLRRILGVLASAPVKGTL-LTAPRSATDAELAAVHTPELLAYLQ 69
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
+ ++ D T+++P S AA LA G ++ A++ V+ G + A+ALVRPPGHHA+P
Sbjct: 70 RLNGQKAQVDAD-TLVSPDSVDAARLAAGASIQAVEAVMKGEARNAFALVRPPGHHAEPD 128
Query: 160 MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
A G+C LNNA +A + G +V+V+D DVH+GNGT F++ V+ S+H
Sbjct: 129 KAMGFCLLNNAAIAAEAGRRLGAERVLVLDWDVHHGNGTQAAFWKRRDVMYQSVHQF--- 185
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P +P G DE+G G G GY +N+ LP G D Y EL++P F+P +I++
Sbjct: 186 --PYYPGTGAADEVGRGPGEGYTVNVGLPGGNSDADYGMIFEELLLPVADAFKPQLILVS 243
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G DS DP G ++ G+ M ++SLAD GRL+++ EGGY + + +HA
Sbjct: 244 AGFDSHQHDPIGGMDVSERGFAAMCSAMKSLADSACDGRLVLLLEGGYSLEGLSQSVHAC 303
Query: 340 LE 341
+E
Sbjct: 304 VE 305
>gi|91975756|ref|YP_568415.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
BisB5]
gi|91682212|gb|ABE38514.1| histone deacetylase superfamily [Rhodopseudomonas palustris BisB5]
Length = 370
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 177/330 (53%), Gaps = 11/330 (3%)
Query: 29 DTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLS 88
DTG G ++ + H +SD + ++ + ++ PA +L
Sbjct: 15 DTGTGSLAAANLAERMQPISHHLAHSDTKRRFHELVSVSGLRDHLVDVVARPATDADILR 74
Query: 89 FHTPDYINELVE-ADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAY 146
HT ++++ + E + + G + DG T+L G ALL+ G + +K V+ G + Y
Sbjct: 75 VHTEEHLSIIKEISARPTGGIAGDGVTMLGNGGLDIALLSAGGAIELVKQVVAGELRNGY 134
Query: 147 ALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRS 205
ALV PPGHHA A G+C NN +A A N G +V ++D DVH+GNGT + ++
Sbjct: 135 ALVNPPGHHAPRNQAMGFCIFNNTSVAAAYARNVLGLDRVAIVDWDVHHGNGTQDIWWTD 194
Query: 206 NKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
VLTIS+H + P N G V E GEG+G GYNLNIPLP G+G+ Y HA +V
Sbjct: 195 PSVLTISIHQH-----LCFPANMGFVTERGEGDGHGYNLNIPLPPGSGNAAYQHAFERVV 249
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
+PA++ + P +I++ G D+S DP R +T G+R++ R+V ADR GG++ VQE
Sbjct: 250 IPALEAYRPQLIIVGSGFDASILDPLARMMVTAAGFRKLARMVIDCADRICGGKIACVQE 309
Query: 325 GGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
GGY Y +C A +E + + LL DP
Sbjct: 310 GGYSPHYLPFCGLAVIEELAE--VRLLDDP 337
>gi|375263659|ref|YP_005025889.1| histone deacetylase superfamily protein [Vibrio sp. EJY3]
gi|369844086|gb|AEX24914.1| histone deacetylase superfamily protein [Vibrio sp. EJY3]
Length = 367
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 179/330 (54%), Gaps = 33/330 (10%)
Query: 28 HDTGKGLFDTGFDP--GFLE--VLEKHPENSDRIKNIVSIL----KRGPISPYISWHSGI 79
HD G T FD GF++ + ++PE R KN++ + + PI+ ++ H
Sbjct: 15 HDAGPC---TVFDAPGGFIQPGLAAENPETKRRFKNLIEVSGLHEELTPITGELATHE-- 69
Query: 80 PAQIPQLLSFHTPDYINEL-VEADKAGGKMVCDGTVLNPGSWGAALLA---VGTTLSAMK 135
L FHT Y+ EL ++D+ G D V P A +A G ++ ++
Sbjct: 70 -----DLSRFHTQTYLQELEAKSDQQFG----DAGVCAPFRQDAFYIAKRSTGLAIATIE 120
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
VL G AY L RPPGHHAQ +G+C L N +A++ A G KV VID DVH+
Sbjct: 121 RVLTGDVDNAYCLTRPPGHHAQSHQGNGFCLLGNIPIAIKAAQAKGLVKKVAVIDWDVHH 180
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGD 253
GNGT E FY + VLT+S+H + ++P N G + E G+G+GFGYNLNIPLP G+G
Sbjct: 181 GNGTQEAFYSNPNVLTMSIHHEN-----NYPVNSGAIAERGDGDGFGYNLNIPLPAGSGI 235
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y + +++ PAI++F+P +IV+ G D+SA DP G L + Y M + + LAD
Sbjct: 236 GTYKATIEQIIEPAIRRFKPELIVIACGFDASAMDPLGCMILNAETYGWMTKRIMKLADS 295
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
G+L ++ EGGY Y +C HA +E +
Sbjct: 296 VCDGKLAMIHEGGYSEGYVPFCGHAVIEAL 325
>gi|346229412|gb|AEO21835.1| propanil hydrolase [Sphingomonas sp. Y57]
Length = 369
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 156/292 (53%), Gaps = 8/292 (2%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE R N+ L+ ++ + +G P + L H DYI EA AGG +
Sbjct: 42 PETKRRFLNL---LRMSGLTDRLVMPAGEPVTVEDCLRIHPADYIRRFKEASDAGGGDLG 98
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
+ G + AL++ G +A+ VL G + AYAL RP GHH P G+C L N
Sbjct: 99 MLAPFSKGGFEIALMSAGLARAAIDDVLTGKVRNAYALSRPAGHHCLPDTPMGFCLLANI 158
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+A++ A G +V V+D DVH+GNGT +Y + VLTIS+H + P
Sbjct: 159 PIAIEAARARHGIERVAVVDWDVHHGNGTQACYYDRSDVLTISVHQDRCF----PPGYSG 214
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
V+E GEG G G+N+NIPLP G+G YVHA +V+PA+ ++ P++IV+ G D++A DP
Sbjct: 215 VEERGEGAGLGHNINIPLPAGSGQDTYVHAFETIVLPALDRYRPDLIVVASGLDANAVDP 274
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
R L + YR + ++ ADR GRL +V EGGY Y +C A +E
Sbjct: 275 LARMLLFSESYRVLTGMMMDAADRLCEGRLAVVHEGGYSEAYVPFCGQAIVE 326
>gi|84499560|ref|ZP_00997848.1| deacetylase / probable acetylpolyamine aminohydrolase [Oceanicola
batsensis HTCC2597]
gi|84392704|gb|EAQ04915.1| deacetylase / probable acetylpolyamine aminohydrolase [Oceanicola
batsensis HTCC2597]
Length = 368
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 165/312 (52%), Gaps = 11/312 (3%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L + PE R++N++ + +S + S PA ++ H Y++ E AGG
Sbjct: 37 LPESPETKRRLRNLMDVTG---LSRDLVMTSAEPAGREDMMRIHPESYLDRFKEMSDAGG 93
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T + A L+ G A+ V+ G + AY+L RPPGHH P +G+C
Sbjct: 94 GELGLRTPFGKDGYEIAALSAGLARQALLDVMRGRVQNAYSLSRPPGHHCLPDWPNGFCL 153
Query: 167 LNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
LNN +A+ A G G+V V+D DVH+GNGT FY + VLTIS+H H ++P
Sbjct: 154 LNNIAIAIAAAQAEGLAGRVAVVDWDVHHGNGTEHIFYDRDDVLTISVHQEH-----NYP 208
Query: 226 QN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
+ G V + G G G G N+NIPLP G G Y+ M L++PA+++F P++IV+ G D+
Sbjct: 209 LDAGDVSDRGTGTGEGCNMNIPLPPGAGHVAYLEVMDRLILPALERFRPDVIVVACGYDA 268
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
FDP R T D + M V+ ADR GRLL+V EGGY Y +C H LE L
Sbjct: 269 GLFDPLARMLCTADTFGVMTARVKGAADRLCDGRLLMVHEGGYSEAYVPFCGHRVLE-EL 327
Query: 345 NLPLALLSDPIA 356
+ + DP+A
Sbjct: 328 SGSSCIAPDPVA 339
>gi|254282793|ref|ZP_04957761.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
gi|219678996|gb|EED35345.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
Length = 371
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 169/300 (56%), Gaps = 8/300 (2%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
+ H EN + + ++++ + +++ A+ ++L FHTP+++ + +GG
Sbjct: 36 DTHAENPETKRRFRNLMEVSGMDQHMTALRPRMARDEEILRFHTPEHLERVKTVSASGGG 95
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T + GS+ A+L+ G L A++ VL G AYALVRPPGHHA G+C
Sbjct: 96 DAGILTPMGAGSFEIAMLSAGGCLVALEAVLSGDVDNAYALVRPPGHHAVADAGMGFCLF 155
Query: 168 NNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NA +A AL + G ++ +D DVH+GNGT FY + LTIS+H ++ P
Sbjct: 156 GNAAIAGFSALEDHGLQRIAFVDWDVHHGNGTQSAFYDDPRALTISIHQDNCF----PPD 211
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G V E GE G GYN+NIPLP G+G Y A ++V+PA+ ++P +I++ G D+ A
Sbjct: 212 SGHVHERGESAGEGYNVNIPLPPGSGVGAYEAAFEQVVIPALDAYQPEVIIVPSGFDAGA 271
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEGV 343
+DP GR +T D YR + ++ + ADR+ GGRLL+ EGGY+ V + + TL G+
Sbjct: 272 YDPLGRMQMTSDSYRNLTSLLLAAADRHCGGRLLMTHEGGYNSWTVPFFGLAVMETLSGI 331
>gi|327400501|ref|YP_004341340.1| histone deacetylase superfamily protein [Archaeoglobus veneficus
SNP6]
gi|327316009|gb|AEA46625.1| histone deacetylase superfamily [Archaeoglobus veneficus SNP6]
Length = 359
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 168/327 (51%), Gaps = 11/327 (3%)
Query: 39 FDPGFLEVLEK--HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDY 94
F P +LE + HPE +R+ + L I + I A +L+ HTP+Y
Sbjct: 7 FHPKYLEHEQTPTHPERKERLAYTLDQLMEEGIFENREIVLLEPFKASESDVLAVHTPEY 66
Query: 95 INELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
L + GG + D T + G ALLA G + A K V +G A+A+VRPPGH
Sbjct: 67 FEFLKRESRKGGVIDWD-TSIPVGLIDVALLAAGGAIRAAKAVAEGEVDNAFAMVRPPGH 125
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA+P G+C+LNN +A + +G K++++D D H+G+GT E FY + VL ISLH
Sbjct: 126 HARPYTGAGFCYLNNIAIATKWLQRNGFKKILILDWDAHHGDGTQEIFYEDSSVLFISLH 185
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
P +P G E G+GEG GY +N+PLP G GD Y+ E++ P FEP+
Sbjct: 186 QM-----PLYPGTGYPHEYGKGEGEGYTINVPLPPGAGDECYLTVFDEIIEPVAIDFEPD 240
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA- 333
I + GQD+ DP LT GY E+ R LA++ GRL V EGGY V +
Sbjct: 241 FIAVSAGQDNHFTDPLTSLALTARGYAELMVRARRLAEKLCDGRLFAVLEGGYSVEKALP 300
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPE 360
Y A + + + ++ + +P +Y E
Sbjct: 301 YTNLAIIAAMAEMDISCIREPESYADE 327
>gi|422013341|ref|ZP_16359969.1| histone deacetylase family protein [Providencia burhodogranariea
DSM 19968]
gi|414103549|gb|EKT65124.1| histone deacetylase family protein [Providencia burhodogranariea
DSM 19968]
Length = 370
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 182/331 (54%), Gaps = 16/331 (4%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE R+KN++ + +S + S P LL H +Y+ GG ++
Sbjct: 43 PETKRRLKNLMDV---SGLSRSLVLSSAEPVSEEILLKIHPQEYLTRFKHLSDNGGGLLG 99
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
L PGS+ A L+VG +A++ VL G AY+L RPPGHH P + G+CFL N
Sbjct: 100 KEAPLGPGSYEIAKLSVGLACAAVEAVLQGELDNAYSLSRPPGHHCLPDESMGFCFLANI 159
Query: 171 GLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
LA++ A +V VID DVH+GNGT F+ + VLTISLH + G G
Sbjct: 160 PLAIERAKERFNLKRVAVIDWDVHHGNGTQHIFWDRSDVLTISLHQD----GCFPAGYGG 215
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
D++G GEG GYNLNIPL G G Y+HAM ++V+PA+++F+P++I++ G D++A DP
Sbjct: 216 EDDIGGGEGTGYNLNIPLLAGAGHNSYIHAMKQIVIPALERFKPDLIIVASGYDANALDP 275
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
R L + +REM ++V AD+ G+L++V EGGY Y +C +E + +
Sbjct: 276 LARMQLHSESFREMTQLVLKAADKLCDGKLVLVHEGGYSEAYVPFCGLVVIEEMSGVRTK 335
Query: 350 LLSDPIAYY-------PEDEAFPVKVIESIK 373
++DP+ + E E F +++++ +K
Sbjct: 336 -VTDPLLDFIGLQQPRAEFELFQLQMLDKLK 365
>gi|163744708|ref|ZP_02152068.1| histone deacetylase family protein [Oceanibulbus indolifex HEL-45]
gi|161381526|gb|EDQ05935.1| histone deacetylase family protein [Oceanibulbus indolifex HEL-45]
Length = 369
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 167/326 (51%), Gaps = 12/326 (3%)
Query: 20 FWDDGMLNHDTGKGLFDTGF----DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
FWD+ H G F P L ++PE R+KN++ + + +
Sbjct: 7 FWDERCFWHAGGNYAFTMPVGGLVQPLAAGGLPENPETKRRMKNLMEVTG---LFAELDT 63
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
S PA L H Y++E AGG + G + A L+ G + A+
Sbjct: 64 RSAAPAGREALARVHPETYLDEFKRLSDAGGGEMGHAVPFARGGYELATLSAGLAIEAVG 123
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHY 194
V G AYAL RPPGHH P + +G+C L N +A++ A G K VVV+D DVH+
Sbjct: 124 AVARGDLDNAYALSRPPGHHCLPDLPNGFCLLANIAIAIEAARAKGLAKRVVVLDWDVHH 183
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGT +Y + VLTISLH G G+V + G G G GYN+N+P+ G+G
Sbjct: 184 GNGTEAIYYDRDDVLTISLHQE----GNYPTDTGSVADRGRGAGEGYNINLPMHAGSGHT 239
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y+HAM +V+PAI+ F P+MI++ G D++ DP R T + EM + +R AD+
Sbjct: 240 AYLHAMDRVVIPAIEAFGPDMIIVACGYDAAIVDPLARMQATAATFAEMTKRIRDTADKV 299
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATL 340
GG+L++V EGGY Y +C HAT+
Sbjct: 300 CGGKLVLVHEGGYSEAYVPFCGHATI 325
>gi|386742993|ref|YP_006216172.1| putative deacetylase [Providencia stuartii MRSN 2154]
gi|384479686|gb|AFH93481.1| putative deacetylase [Providencia stuartii MRSN 2154]
Length = 379
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 179/326 (54%), Gaps = 12/326 (3%)
Query: 57 IKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLN 116
++ S++ ++ ++ +S P HT +Y+N+ +E K G +
Sbjct: 55 VRRFKSLIDVSGMNEFLFSYSAPPITYNDAARVHTQEYLNDFIELSKNEGGELGLQAPFG 114
Query: 117 PGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQL 176
PG + ALL+ G +A+ V+DG AYA+ P GHHA P A G +L N+ +A +
Sbjct: 115 PGGYQIALLSAGQAKAAVHQVMDGSLNRAYAVCVPAGHHALPDKAMGATYLANSSIAAKY 174
Query: 177 AL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELG 234
AL N G KV ++D DVH+GNGT FY NKVLTIS+H ++ P N G ++E G
Sbjct: 175 ALENLGAKKVAILDWDVHHGNGTQAIFYNDNKVLTISMHQDN-----CFPINSGGIEEQG 229
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
EG G+N+NIPL G G Y++A+ + +PA++ ++P++I++ G D+S FDP G
Sbjct: 230 NREGLGFNINIPLLPGCGHDEYLYALRTIAIPALRTYKPDLIIIGSGYDASTFDPLGHMQ 289
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
L YREM + ++A G+++++ EGGY Y +C A LEG+ + ++ DP
Sbjct: 290 LHSQSYREMIESIVAVAQDVCHGKVVVIHEGGYSEHYVPFCALALLEGLSGINTQVV-DP 348
Query: 355 IAYYPEDEAFPVKVIESIKQYQNDVI 380
+ + + P +++K+ Q ++I
Sbjct: 349 FISFIQQQTIP----QALKELQENLI 370
>gi|84514456|ref|ZP_01001820.1| deacetylase / probable acetylpolyamine aminohydrolase [Loktanella
vestfoldensis SKA53]
gi|84511507|gb|EAQ07960.1| deacetylase / probable acetylpolyamine aminohydrolase [Loktanella
vestfoldensis SKA53]
Length = 367
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 189/370 (51%), Gaps = 26/370 (7%)
Query: 20 FWDDGMLNHDTGK--GLFDTGFDPGFLEV----LEKHPENSDRIKNIVSILKRGPISPYI 73
FWD+ H G G+ G G ++ L + PE R+KN++++ ++ +
Sbjct: 6 FWDERCFWHGGGNYAGMLPVG---GLVQPMNGGLPESPETKRRLKNLIAVTG---LARDL 59
Query: 74 SWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSA 133
PA LL H Y+ AGG + T PG + A L+ G +A
Sbjct: 60 VMRGAAPATTADLLRVHPAHYLERFKALSDAGGGELGRRTPFGPGGYEIAALSAGLAKAA 119
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDV 192
+ VL AYAL RPPGHH P +G+C LNN G+A++ A +G + V+D DV
Sbjct: 120 LLAVLQDEMDNAYALSRPPGHHCLPDFPNGFCLLNNIGIAIEAARAAGLAQRFAVLDWDV 179
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGT 251
H+GNGT FY VLT+S+H + ++P + G + G G G G NLNIPLP GT
Sbjct: 180 HHGNGTEAIFYDRADVLTVSIHQDR-----NYPMDTGAFADRGTGAGAGCNLNIPLPPGT 234
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
G +GY+ AM L +PAI+ F P+++++ G D++A DP GR T D + +M V LA
Sbjct: 235 GHKGYLAAMDRLALPAIRDFAPDVLIIACGYDAAANDPLGRMLATADTFAQMTARVMKLA 294
Query: 312 DRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIES 371
GRL++V EGGY TY +C HA L+ + + DP A E FP++ ++
Sbjct: 295 RDICDGRLVMVHEGGYSETYVPFCGHAVLQTMAGSTVH-APDPFA-----EVFPLRQPDA 348
Query: 372 -IKQYQNDVI 380
Y + VI
Sbjct: 349 GFDAYLDTVI 358
>gi|444911854|ref|ZP_21232025.1| Acetylspermidine deacetylase [Cystobacter fuscus DSM 2262]
gi|444717630|gb|ELW58456.1| Acetylspermidine deacetylase [Cystobacter fuscus DSM 2262]
Length = 343
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 164/293 (55%), Gaps = 7/293 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE R++ I+S+L+ PI P S PA +L + H+P + E + +
Sbjct: 20 EHPECPARLERILSLLESQPI-PGTERRSPRPATDEELAAVHSPRLL-EALRGLRGKSTS 77
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T ++P S+ AA+LA G ++ A++ V+ G + A+ALVRPPGHHA+P A G+C LN
Sbjct: 78 LDPDTAMSPDSYDAAVLAAGASVQAVEEVMAGRARNAFALVRPPGHHAEPEQAMGFCLLN 137
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
NA +A + A G +V++ D DVH+GNGT F++ VL +S H P +P G
Sbjct: 138 NAAIAAEAARRLGAQRVLIFDWDVHHGNGTQAAFWKRRDVLYMSAHQF-----PYYPGTG 192
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
E+GEGEG GY +N +P G+ D Y L +P + F P+++++ G D+ D
Sbjct: 193 APTEIGEGEGLGYTVNCGVPGGSNDADYGALCERLFLPVARAFRPDLVIISAGFDAHRED 252
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
P G +T G+ M + LA Y GGRL+++ EGGY + + +HA +E
Sbjct: 253 PIGGMVVTERGFAAMCTAFQQLARDYCGGRLVLLLEGGYSLEGLSRSVHACVE 305
>gi|115351970|ref|YP_773809.1| histone deacetylase superfamily protein [Burkholderia ambifaria
AMMD]
gi|115281958|gb|ABI87475.1| histone deacetylase superfamily [Burkholderia ambifaria AMMD]
Length = 369
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 157/293 (53%), Gaps = 5/293 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + +S+++ ++ ++ PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRFLSLVQASGLAAHLDMRGAAPATADDLLRIHPASYLDAFRALSDAHGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ H A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIATLSAGLAIAAIDTVVAEHAASAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V VID DVH+GNGT +Y LTISLH + + P + +G
Sbjct: 158 IPIAIEAARAKHGIDRVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDR-CFPPGY--SG 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D GEG G G NLN+PL G+GD Y +A +V+PA+++F P +IV+ G D+SA D
Sbjct: 215 GSDR-GEGAGVGANLNVPLLAGSGDDAYRYAFERIVLPALERFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E
Sbjct: 274 PLARMLLHTDSYRFMTRAVKDAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVE 326
>gi|381204931|ref|ZP_09912002.1| histone deacetylase superfamily protein [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 313
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 174/314 (55%), Gaps = 8/314 (2%)
Query: 37 TGF--DPGFLE-VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPD 93
TGF +P +LE HPEN+DR++ I L+ + + G A++ ++ H+
Sbjct: 3 TGFYTNPIYLEHDTGNHPENADRLRAIDKHLRYSGLLNELEMRPGCTAELKEIQLLHSKK 62
Query: 94 YINELVEADKAG-GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPP 152
YI+ + EA + G G + +++PG++GAAL AVG L ++ V D A+ +RPP
Sbjct: 63 YIDSIREAAELGRGILGTPDCIISPGTFGAALHAVGAVLDSVVQVADNKIDNAFCAIRPP 122
Query: 153 GHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTI 211
GHHA+ A G+CFLNN +A + L N G ++++ D DVH+GNGT F +S KVL
Sbjct: 123 GHHAEHDAAMGFCFLNNVAIAAEFLQKNFGYQRILIFDFDVHHGNGTQHLFEKSEKVLYA 182
Query: 212 SLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKF 271
S H + + +P G E G G G G+ LN PLP GT D Y+ ++P + +
Sbjct: 183 STHQDPRTC---YPGTGFAHETGFGSGKGFTLNFPLPPGTTDDRYLEFFQNKIIPQFEDY 239
Query: 272 EPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY 331
+P+ I+L G D DP LT + Y E+ + +R+LA++++ GRL+ + EGGY +
Sbjct: 240 KPDFILLSAGFDGHTRDPLAMLDLTENCYHEITKQMRTLAEKFASGRLVSLLEGGYDLEA 299
Query: 332 SAYCLHATLEGVLN 345
A + A + +L+
Sbjct: 300 LALSVEAHILALLH 313
>gi|56698027|ref|YP_168398.1| histone deacetylase [Ruegeria pomeroyi DSS-3]
gi|56679764|gb|AAV96430.1| histone deacetylase family protein [Ruegeria pomeroyi DSS-3]
Length = 364
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 166/297 (55%), Gaps = 14/297 (4%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L + PE R+KN++ + + + +G A I +L H YI+E +GG
Sbjct: 38 LPEAPETKRRLKNLIEVTG---LHSDLEMVTGGSATIEDVLRVHPRSYIDEFRRLSDSGG 94
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T PG++ A+L+ G + A++ V+ G + AYAL RPPGHH P +G+C
Sbjct: 95 GELGLRTPFGPGAFEIAMLSAGLVIDAVEGVVQGRYRNAYALSRPPGHHCLPDWPNGFCL 154
Query: 167 LNNAGLAVQLALNSGC-GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A G GKV V+D DVH+GNGT +Y + VLTIS+H + +P
Sbjct: 155 LANIAIAIEAAKAKGLLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQDR-----CYP 209
Query: 226 QN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
+ G++D+ G+G G G+N+NIPLP G G YV A L++P ++ F+ +++++ G D+
Sbjct: 210 HDTGSIDDQGKGAGLGFNMNIPLPPGCGHNAYVEATERLIIPKLKAFDADLVIIACGFDA 269
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
FDP R + + +REM R V ++D G+L+ EGGY Y +C HA LE
Sbjct: 270 GGFDPLARMMCSAETFREMTRRVMQVSD----GKLVAAHEGGYSELYVPFCGHAMLE 322
>gi|330507266|ref|YP_004383694.1| histone deacetylase family protein [Methanosaeta concilii GP6]
gi|328928074|gb|AEB67876.1| histone deacetylase family protein [Methanosaeta concilii GP6]
Length = 339
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 178/335 (53%), Gaps = 19/335 (5%)
Query: 43 FLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEAD 102
L + HPE +R+ I+ ++ + I + PA I Q+ S H YI+++
Sbjct: 15 LLHDTDGHPERKERLTAILDRIESEGLD--IECITPKPATIEQVESIHGRRYIDQVKAIC 72
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+ GG + T+L+ S+ AAL+A G ++A+ V++GH + A+ALVRPPGHHA P
Sbjct: 73 ERGGGHLDIDTILSKDSFDAALMAAGGAIAAVDAVIEGH-RGAFALVRPPGHHAMPNRGM 131
Query: 163 GYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
G+C NN +A + A + KV+++D DVH+GNGT FY VL S H P
Sbjct: 132 GFCVFNNVAIAARHAQSRDLEKVLIVDWDVHHGNGTNAIFYSDRSVLYFSTHQF-----P 186
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P G ++++GE G N+N+PLP+GTGD GY+ A E++ P +F P+++++ GQ
Sbjct: 187 HYPGTGRMNDVGEDGAEGTNVNVPLPSGTGDEGYLMAYREILKPIAIEFSPDIVLVSAGQ 246
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
D DP G LT G+ + +V+ +AD S GR+ V EGGY+ L A E
Sbjct: 247 DPHKDDPLGGMGLTASGFAAIAGVVKEVADICSNGRVAAVLEGGYN-------LFAQAEA 299
Query: 343 VLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
++ A D P+ F KV I + +N
Sbjct: 300 IVAQIRAFQGD----VPDIHGFDPKVARRIDEIKN 330
>gi|156937987|ref|YP_001435783.1| histone deacetylase superfamily protein [Ignicoccus hospitalis
KIN4/I]
gi|156566971|gb|ABU82376.1| histone deacetylase superfamily [Ignicoccus hospitalis KIN4/I]
Length = 345
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 161/278 (57%), Gaps = 5/278 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ +R+K I+ ++KR + Y+ S +P +L H DY+ + +AGG +
Sbjct: 20 HPESPERVKAILDLMKRTKLPNYVEVRSPVPIDERELELVHDRDYVEYVKRVIEAGGGYL 79
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T +P SW AL A GT A + ++G +A+A VRPPGHHA+ + G+C NN
Sbjct: 80 DPDTYASPTSWEPALYAAGTVAYAAQRAVEGDHWLAFAAVRPPGHHARRSEGRGFCIFNN 139
Query: 170 AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
LA ++ G +V V+DIDVH+G+GTA FY +++VL +S H + + +P G
Sbjct: 140 VALAAEVLRRRGM-RVAVVDIDVHWGDGTAYIFYNTDEVLYVSTHQDPRT---LYPFEGF 195
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
+ G G+G GY +N+PLP GTGD+G+++A+ E+V+P ++ + P +++ G D+ DP
Sbjct: 196 PSQKGSGKGEGYTVNVPLPPGTGDKGFLYALHEVVLPVLEAYLPQALLVSAGWDTHWLDP 255
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+T+DG+ E + S A+ G ++I EGGY
Sbjct: 256 LASLEVTVDGHWEAVSSLASFAESL-GIPIVIALEGGY 292
>gi|134288317|ref|YP_001110480.1| histone deacetylase superfamily protein [Burkholderia vietnamiensis
G4]
gi|134132967|gb|ABO59677.1| histone deacetylase superfamily [Burkholderia vietnamiensis G4]
Length = 376
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 169/323 (52%), Gaps = 9/323 (2%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
W D HDTG + PG +H E+ D + ++ ++ ++
Sbjct: 10 WHDLYAWHDTGT--YAAFMRPGLTVQPHQHIEHPDSKRRFAELISVSGMNDHLVNIRPEL 67
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A LL FHTP+Y++++ + G + T PG + A L+ G +S ++ V G
Sbjct: 68 ATREDLLRFHTPEYVDKIRTLSEGRGGEAGEHTPFGPGGYEIACLSTGGCISLLESVYRG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTA 199
+ Y+L RPPGHHA G+C N +A++ L +G +V V+D DVH+GN
Sbjct: 128 DVRNGYSLNRPPGHHAVADQGRGFCIFGNGVVAIRRLQAMTGVKRVAVVDWDVHHGNSAQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY+ VLTIS+H + ++P + G + E G G G+G N+NIPLP G+GD Y++
Sbjct: 188 DAFYQDPSVLTISVHQDR-----NYPTDSGALSERGIGAGWGTNINIPLPAGSGDEAYMN 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
++VPA+ ++P++I++ G D+S DP GR L + YR+M R + AD GR
Sbjct: 243 VFDMVIVPALTAYKPSVIIVHSGFDASVMDPLGRMLLNSESYRKMTRKLMDAADTLCDGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLE 341
L + EGGY T+ YC A LE
Sbjct: 303 LAMFHEGGYSPTHVPYCGLAVLE 325
>gi|433776571|ref|YP_007307038.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
gi|433668586|gb|AGB47662.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
Length = 373
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 175/327 (53%), Gaps = 9/327 (2%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+ + ++ HDTG PG +H E+ + + ++++ ++ ++ P
Sbjct: 7 FHEQLMWHDTGSSA--DMMPPGRFVEPGRHLESPGSKRRLNNLIQVSGLARHLVPIIAEP 64
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
+ LL HT +++++ + G + S+ ALL+ GTT +AM+ VL G
Sbjct: 65 VTVEDLLRVHTQRHVDDIRMLSEGGSGFAGPQAPIGLNSFDIALLSAGTTYAAMRAVLTG 124
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGC-GKVVVIDIDVHYGNGTA 199
AYAL RPPGHHA+P A G C +N G+AV+ + G G+ V+D DVH+GNGT
Sbjct: 125 RVDNAYALARPPGHHAEPDQAMGNCLFSNIGVAVRRLQHEGLLGRAAVVDWDVHHGNGTE 184
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQ-NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
FY VLTISLH ++ +P G + + G+G G GYN+N+PLP G+G Y
Sbjct: 185 TVFYSDPSVLTISLHQDN-----LYPTGRGALVDNGKGPGEGYNINVPLPAGSGTGAYEA 239
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
++ PA++ F+PN++++ G D+S FDP GR L + +R + + + A S GR
Sbjct: 240 TFDRVIGPALRAFKPNLVIVASGFDASGFDPLGRMMLNSECFRRLAARMVAFAAEVSNGR 299
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLN 345
L++ EGGY Y +C HA +E + N
Sbjct: 300 LMMSHEGGYSEGYVPFCGHAVIETLAN 326
>gi|337270324|ref|YP_004614379.1| Histone deacetylase [Mesorhizobium opportunistum WSM2075]
gi|336030634|gb|AEH90285.1| Histone deacetylase [Mesorhizobium opportunistum WSM2075]
Length = 373
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 176/327 (53%), Gaps = 9/327 (2%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+ + ++ HDTG PG +H E+ + + ++++ ++ ++ P
Sbjct: 7 FHEQLMWHDTGSSA--DMMPPGRFVEPGRHLESPGSKRRLNNLIQVSGLARHLVPILAEP 64
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
+ LL HT +++++ + G + S+ ALL+ GT +AM+ VL G
Sbjct: 65 VTVEDLLRVHTQRHVDDIRMLSERGSGFAGPQAPIGLNSFDIALLSAGTAYAAMRAVLTG 124
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGC-GKVVVIDIDVHYGNGTA 199
AYAL RPPGHHA+P A G C +N G++V+ + G G+ ++D DVH+GNGT
Sbjct: 125 RVDNAYALARPPGHHAEPDQAMGNCLFSNIGVSVRRLQHEGLLGRAAIVDWDVHHGNGTE 184
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQ-NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
FY VLTISLH ++ +P G + + G+G G GYN+NIPLP G+G Y
Sbjct: 185 TVFYSDPSVLTISLHQDN-----LYPTGRGALADNGKGAGEGYNINIPLPAGSGTGAYEA 239
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
+ +V PA++ F+P+++++ G D+S FDP GR L + +R + + +LA S GR
Sbjct: 240 SFDRVVAPALRAFKPDLVIVASGFDASGFDPLGRMMLNSECFRRLAARMVALAAETSDGR 299
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLN 345
L++ EGGY Y +C HA +E + N
Sbjct: 300 LMMTHEGGYSEGYVPFCGHAVIETLAN 326
>gi|189220417|ref|YP_001941057.1| deacetylase [Methylacidiphilum infernorum V4]
gi|189187275|gb|ACD84460.1| Deacetylase family enzyme [Methylacidiphilum infernorum V4]
Length = 314
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 159/298 (53%), Gaps = 10/298 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ RI ++ L+ + + W A + HTP YI E V + G ++
Sbjct: 22 HPESPARITQLLPKLREDFLHS-VLWIEPTAAPEQWIQRVHTPQYI-ERVRKTQKGPMVL 79
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T S+ ALLAVG L+A+ V+ K A+ VRPPGHHA A G+C
Sbjct: 80 LDGGDTFAYGPSYEVALLAVGAALNAVDKVMSKEIKNAFCFVRPPGHHALANAAMGFCLF 139
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N +A + AL G KV ++D DVH+GNGT + FY +V SLH P +P
Sbjct: 140 NTVAIAARYALEKHGLKKVFILDWDVHHGNGTQDIFYEDPQVFYASLHQF-----PHYPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E+G+ EG GY LN+ +P G D Y A E ++PAI+ F+P+MI++ G D+
Sbjct: 195 TGKSTEIGKNEGLGYTLNLCMPRGASDSHYEKAFDEKIIPAIESFKPDMILISAGFDAHK 254
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
DP G LT G+ +M R+++ A+R+ GR++ V EGGY++ + + L+ +L
Sbjct: 255 DDPLGEIYLTEQGFEKMTRLIKEAAERHCQGRMISVLEGGYNIESLYKSIKSHLQALL 312
>gi|126667705|ref|ZP_01738673.1| deacetylase / probable acetylpolyamine aminohydrolase [Marinobacter
sp. ELB17]
gi|126627808|gb|EAZ98437.1| deacetylase / probable acetylpolyamine aminohydrolase [Marinobacter
sp. ELB17]
Length = 376
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 186/365 (50%), Gaps = 19/365 (5%)
Query: 20 FWDDGMLNHDTGK-GLFDTGFDPGFLEV--LEKHPENSDRIKNIVSILKRGPISPYISWH 76
+W + HD G G+F + FL+ + PE+ R+KN++ + G I +
Sbjct: 16 YWHERCFWHDPGAIGVFSSA--GAFLQPQPASESPESKRRLKNLLEV--SGLIDELVVVK 71
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
PA L FHT Y++EL + D GG D GS AA + G ++A++
Sbjct: 72 P-PPATREDLEYFHTGRYLDELEKGDLQGGGDGGDCAPYTAGSLAAAKQSAGLAIAAVED 130
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYG 195
V G + AYAL RPPGHHA+ G+C L N +A++ A G G+V V+D DVH+G
Sbjct: 131 VALGIRRRAYALCRPPGHHAESDRGRGFCLLGNIPVAIKRARALGQIGRVAVLDWDVHHG 190
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGT FY V T+S+H G G +E GEG G G NLN P+P G G
Sbjct: 191 NGTQSAFYDDPDVFTLSIHQA----GNYPLDTGAFEEQGEGAGLGCNLNAPMPPGCGIGA 246
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y +AM+ L++PA+ F P +IV+ G D+ A DP G+ L + EM +R LA++
Sbjct: 247 YRYAMSHLILPALTDFRPELIVVACGYDACAKDPLGKMLLNSGAFSEMTEQIRKLAEQVC 306
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
GRL++V EGGY Y+ C HA + + + SD P++ ++++ +
Sbjct: 307 DGRLVMVHEGGYSEGYAPLCGHAAIAALAD------SDTRVPDPQNAEIAAWGYQALQPH 360
Query: 376 QNDVI 380
Q ++I
Sbjct: 361 QRELI 365
>gi|262041406|ref|ZP_06014610.1| histone deacetylase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259041260|gb|EEW42327.1| histone deacetylase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 649
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 156/277 (56%), Gaps = 10/277 (3%)
Query: 105 GGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
GG M+ L PGS+ A L+ G +A++ VL G AY+L RPPGHH P + G+
Sbjct: 372 GGGMLGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGF 431
Query: 165 CFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
CFL N +AV+ A G GKV +ID DVH+GNGT + + + VLTISLH + G
Sbjct: 432 CFLANIPIAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQD----GCF 487
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
P D+ G G G GYN+NIPL G GD + +A+ +V+PA+ +FEP +I++ G D
Sbjct: 488 PPGYAGEDDRGVGAGEGYNINIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYD 547
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
++A DP R L D +R M V+ ADR GG+L++V EGGY +Y +C A +E +
Sbjct: 548 ANAMDPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEAL 607
Query: 344 LNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
+ + DP+ + + + + + Q+Q I
Sbjct: 608 SGIRTE-VQDPLLEFIQQQ----QPRATFAQFQRQAI 639
>gi|78066701|ref|YP_369470.1| histone deacetylase superfamily protein [Burkholderia sp. 383]
gi|77967446|gb|ABB08826.1| Histone deacetylase superfamily [Burkholderia sp. 383]
Length = 369
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 170/338 (50%), Gaps = 10/338 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + +S+++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRFLSLVQASGLAAQLDLRGAEPASTTDLLRIHPAHYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAITAVDTVLGERAANAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G ++ VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHGIERIAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D+ GEG G G NLN+PL G+GD Y +A +V+PA+++F P +IV+ G D+SA D
Sbjct: 214 GADDRGEGAGAGANLNVPLLAGSGDDAYRYAFERIVLPALERFRPELIVIASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + +
Sbjct: 274 PLARMQLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGVRT 333
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
++DP+ D A + E +Q +++ L S
Sbjct: 334 D-VADPML----DLAIAQQPGERFVAFQRELLDELAAS 366
>gi|386001263|ref|YP_005919562.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
gi|357209319|gb|AET63939.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
Length = 340
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 180/337 (53%), Gaps = 15/337 (4%)
Query: 39 FDPGFLE-VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINE 97
+ P +LE + HPE +R+ + + +++ + + + PA + ++ + H+P YI++
Sbjct: 8 YHPIYLEHETDGHPERKERLISALEMIRSSGLE--LELVTPRPATLEEVRAVHSPGYIDQ 65
Query: 98 LVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
+ + GG + TV++ S+ AAL+A G ++ ++ V DG + A+ALVRPPGHHA
Sbjct: 66 VRTISERGGGYLDLDTVVSRRSYEAALMAAGGVITGIERVNDGL-ENAFALVRPPGHHAL 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
P G+C NN + + A G +V+++D DVH+GNGT+ FY V+ S H
Sbjct: 125 PNRGMGFCIFNNVAIGARFAQRMGMERVLIVDWDVHHGNGTSAIFYDDRSVMYFSTHQF- 183
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIV 277
P +P G V ELG G+ +N+PLP GTGD GY A E++ P +F+P++++
Sbjct: 184 ----PHYPGTGRVKELGMDGAEGFTVNVPLPWGTGDSGYFAAFEEILKPLALEFDPDIVL 239
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ GQD DP LT + M V+ +ADR GGRL+ EGGY+++ A +
Sbjct: 240 VSAGQDPHQADPLSGMNLTCGAFGYMAAAVKEVADRCCGGRLVAALEGGYNLSALAESIV 299
Query: 338 ATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
A L G DP E++ + IE +K+
Sbjct: 300 AVLRGFSG------EDPGRIDGEEDPRAAERIEEVKR 330
>gi|116753988|ref|YP_843106.1| histone deacetylase superfamily protein [Methanosaeta thermophila
PT]
gi|116665439|gb|ABK14466.1| histone deacetylase superfamily [Methanosaeta thermophila PT]
Length = 344
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 178/330 (53%), Gaps = 17/330 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE +R+ I+ ++ ++P + PA + ++ + H+ YI ++ ++ GG+
Sbjct: 24 EHPERKERLIAIMERIEAEGLNP--NRIEPRPASLDKIEAVHSRRYIEQVRSICERGGGR 81
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ D TVL+ S+ AL+A G + + HV+ + +ALVRPPGHHA P G+C
Sbjct: 82 LDID-TVLSKDSYDVALMAAGGVCAGVDHVMKKPDPV-FALVRPPGHHATPHRGMGFCVF 139
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + A + G KV+++D DVH+GNGT FY N VL S H + P +P
Sbjct: 140 NNVAIGARYAQSLGLKKVLIVDWDVHHGNGTQAIFYEDNSVLYFSTHQH-----PHYPGT 194
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G V E+G+G+G G+ +N+PLP G D GY+ E++VP +F P ++ + G D
Sbjct: 195 GRVTEVGDGKGKGFTVNVPLPPGIDDSGYLAVYKEILVPVADEFRPEIVFVSAGFDPHQM 254
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP G LT +G+ + +V+ +ADR++GGR++ EGGY L + E V+++
Sbjct: 255 DPLGGMRLTENGFGALAGLVKDIADRHAGGRIVAALEGGYR-------LESLSESVVSVL 307
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
A + P +A + IE ++ Q
Sbjct: 308 RAFQGEVPDVMPLKDAPLTRRIEEVRSVQK 337
>gi|343496964|ref|ZP_08735049.1| putative acetylpolyamine aminohydrolase [Vibrio nigripulchritudo
ATCC 27043]
gi|342820417|gb|EGU55240.1| putative acetylpolyamine aminohydrolase [Vibrio nigripulchritudo
ATCC 27043]
Length = 374
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 168/307 (54%), Gaps = 11/307 (3%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGKMV 109
PE R KN+ L+ +S +++ S PA QLL H Y+NE +D+ GG++
Sbjct: 43 PETKRRFKNL---LEASGLSSHLAMSSAPPASEAQLLKVHPEHYLNEFKSLSDQKGGELG 99
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
GS+ A + G SA+ V+ G K AY+L RPPGHH A G+C N
Sbjct: 100 LYAP-FGKGSYEIASQSAGLACSAVDRVMRGEWKNAYSLSRPPGHHCLADKAMGFCLFAN 158
Query: 170 AGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A + A++ G ++ VID DVH+GNGT + FY + VLTIS+H G + P +
Sbjct: 159 IAIAAEHAISEYGVNRIAVIDWDVHHGNGTQDIFYSRSDVLTISIH-QQGCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
V++ G G G G N+N+PL G G + Y+ AM +V+PA+ ++P +I + G D+S D
Sbjct: 215 GVEDTGSGNGQGKNINVPLMPGGGHQSYLDAMENIVIPALHAYKPELIFVASGYDASGVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R D YR+M ++ +A+++ RL++V EGGY Y +C A +E + ++
Sbjct: 275 PLARMLAHSDTYRQMTKMTMEVANQHCENRLIVVHEGGYSEAYVPFCGLAVMEALTDIRT 334
Query: 349 ALLSDPI 355
+ + DP+
Sbjct: 335 S-VEDPL 340
>gi|421866855|ref|ZP_16298517.1| Histone deacetylase 6 [Burkholderia cenocepacia H111]
gi|444362595|ref|ZP_21163101.1| histone deacetylase family protein [Burkholderia cenocepacia BC7]
gi|358073019|emb|CCE49395.1| Histone deacetylase 6 [Burkholderia cenocepacia H111]
gi|443596543|gb|ELT65044.1| histone deacetylase family protein [Burkholderia cenocepacia BC7]
Length = 369
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 169/338 (50%), Gaps = 10/338 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + +S+++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRFLSLVQASGLAAQLDLRGAAPATTADLLRIHPAHYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIAAVDAVVGERAANAFSLSRPPGHHCLRDRPMGFCMLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHGIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D+ GEG G G NLN+PL G+GD Y +A +V+PA+ +F P +IV+ G D+SA D
Sbjct: 214 GADDRGEGAGIGANLNVPLLAGSGDDAYRYAFERIVLPALARFRPELIVIASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + +
Sbjct: 274 PLARMQLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGVRT 333
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
++DP+ D A + E +Q +++ L S
Sbjct: 334 E-VADPML----DLAIAQQPGERFVAFQRELLDELAAS 366
>gi|448427499|ref|ZP_21583814.1| histone deacetylase superfamily protein [Halorubrum terrestre JCM
10247]
gi|445678186|gb|ELZ30680.1| histone deacetylase superfamily protein [Halorubrum terrestre JCM
10247]
Length = 334
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 175/342 (51%), Gaps = 33/342 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+ D L+HDTG E+HPEN DR++ I L + Y+ P
Sbjct: 5 YSDRCLDHDTG----------------ERHPENPDRLRAIRRGLAKRHGVEYVEAE---P 45
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A+ + + H PDY++EL GG TV + G+W AAL + G A + L G
Sbjct: 46 AEKAAVTAVHDPDYVDELESFVADGGGSWDPDTVASDGTWDAALTSAGLAQWAAREALTG 105
Query: 141 --HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNG 197
+ +A+ RPPGHHA A G+CF NNA +A Q AL+ G +V + D DVH+GNG
Sbjct: 106 LTGRQTPFAVGRPPGHHAVTDDAMGFCFFNNAAVAAQTALDEGLADRVAIFDWDVHHGNG 165
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + FY V S+H + +P G +DE GEG+G G N+PL G GD Y+
Sbjct: 166 TQDIFYDRGDVFYASIHED-----GLYPDTGDLDETGEGDGEGATANLPLAAGAGDADYL 220
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+A+ E + PA+ +F+P+++++ G D+ DP R ++ +GY + +RSLAD
Sbjct: 221 YAVDEGIAPAVDRFDPDLLIVSAGFDAHRHDPISRMRVSSEGYALLTDRIRSLADDVGAA 280
Query: 318 RLLIVQEGGYHVTYSA---YCLHATLEGVLNLPLALLSDPIA 356
++ EGGY + A +H T +G +P+A DP A
Sbjct: 281 NAYVL-EGGYGLDTLAEGVSMVHETYDG--RMPVATDEDPDA 319
>gi|206560367|ref|YP_002231131.1| histone deacetylase family protein [Burkholderia cenocepacia J2315]
gi|198036408|emb|CAR52304.1| histone deacetylase family protein [Burkholderia cenocepacia J2315]
Length = 375
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 169/338 (50%), Gaps = 10/338 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + +S+++ ++ + PA LL H Y++ A G +
Sbjct: 44 YAESPDSKRRFLSLVQASGLAAQLDLRGAAPATTADLLRIHPAHYLDAFRALSDANGGDL 103
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ A++L RPPGHH G+C L N
Sbjct: 104 GDLAPFGKGSYEIAALSAGLAIAAVDAVVGERAANAFSLSRPPGHHCLRDRPMGFCMLAN 163
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 164 IPIAIEAARAKHGIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 219
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D+ GEG G G NLN+PL G+GD Y +A +V+PA+ +F P +IV+ G D+SA D
Sbjct: 220 GADDRGEGAGIGANLNVPLLAGSGDDAYRYAFERIVLPALARFRPELIVIASGLDASAVD 279
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + +
Sbjct: 280 PLARMQLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGVRT 339
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
++DP+ D A + E +Q +++ L S
Sbjct: 340 E-VADPML----DLAIAQQPGERFVAFQRELLDELAAS 372
>gi|83944322|ref|ZP_00956777.1| deacetylase / probable acetylpolyamine aminohydrolase
[Sulfitobacter sp. EE-36]
gi|83844866|gb|EAP82748.1| deacetylase / probable acetylpolyamine aminohydrolase
[Sulfitobacter sp. EE-36]
Length = 368
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 174/322 (54%), Gaps = 14/322 (4%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L ++PE R++N++ + + + S PA LL H Y+++ AGG
Sbjct: 37 LPENPETKRRLRNLMEVTG---LMAELDVRSAAPASREDLLRVHPAAYLDDFKRLSDAGG 93
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T G + A L+ G +L+A++ V G AYAL RPPGHHA P +G+C
Sbjct: 94 GELGLRTPFAAGGFEIAALSAGLSLAAVEAVAKGDLDNAYALSRPPGHHALPDFPNGFCL 153
Query: 167 LNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A G +V V+D DVH+GNGT FY + VLTISLH G
Sbjct: 154 LANIAIAIEAAKAKGLVRRVAVLDWDVHHGNGTEAIFYDRDDVLTISLHQE----GNYPL 209
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + + G G G GYN+N+P+ G+G Y+HA+ +V+PA+ ++P+MI++ G D+S
Sbjct: 210 DTGALADRGNGAGAGYNINLPMHAGSGHTAYLHALDRVVLPALDTYQPDMIIVACGFDAS 269
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
DP R T + + EM + ++++A + GG+L++V EGGY Y +C HAT+ + +
Sbjct: 270 IVDPLARMQATAETFAEMTQRIKAVAQKLCGGKLVLVHEGGYSEAYVPFCGHATIAALAD 329
Query: 346 LPLALLSDPIAYYPEDEAFPVK 367
SD A P + F ++
Sbjct: 330 ------SDITAPDPHAKNFRIR 345
>gi|448482815|ref|ZP_21605586.1| histone deacetylase superfamily protein [Halorubrum arcis JCM
13916]
gi|445821101|gb|EMA70897.1| histone deacetylase superfamily protein [Halorubrum arcis JCM
13916]
Length = 334
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 174/342 (50%), Gaps = 33/342 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+ D L+HDTG E+HPEN DR++ I L + Y+ P
Sbjct: 5 YSDRCLDHDTG----------------ERHPENPDRLRAIRRGLAKRHGVEYVE---ADP 45
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A+ + + H PDY++EL GG TV + G+W AAL + G A + L G
Sbjct: 46 AEKAAVTAVHDPDYVDELESFVADGGGSWDPDTVASDGTWDAALTSAGLAQWAAREALTG 105
Query: 141 HG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNG 197
+ +A+ RPPGHHA A G+CF NNA +A Q AL+ G +V + D DVH+GNG
Sbjct: 106 STGRQTPFAVGRPPGHHAVTDDAMGFCFFNNAAVAAQTALDEGLADRVAIFDWDVHHGNG 165
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + FY V S+H + +P G +DE GEG+G G N+PL G GD Y+
Sbjct: 166 TQDIFYDRGDVFYASIHED-----GLYPDTGDLDETGEGDGEGATANLPLAAGAGDADYL 220
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+A+ E + PA+ +F+P+++++ G D+ DP R ++ +GY + +RSLAD G
Sbjct: 221 YAVDEGIAPAVDRFDPDLLIVSAGFDAHRHDPISRMRVSSEGYALLTDRIRSLADDV-GA 279
Query: 318 RLLIVQEGGYHVTYSA---YCLHATLEGVLNLPLALLSDPIA 356
V EGGY + A +H T +G P+A DP A
Sbjct: 280 TNAYVLEGGYGLDTLAEGVSMVHETYDG--RTPVATDEDPDA 319
>gi|429215069|ref|ZP_19206231.1| putative acetylpolyamine aminohydrolase [Pseudomonas sp. M1]
gi|428154296|gb|EKX00847.1| putative acetylpolyamine aminohydrolase [Pseudomonas sp. M1]
Length = 370
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 164/309 (53%), Gaps = 9/309 (2%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE+ R+KN++ + ++ + S PA LL H Y+ AGG +
Sbjct: 43 PESKRRLKNLMDV---SGLTRQLDLRSAEPASEQDLLRVHPEHYLQRFKALSDAGGGELG 99
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D + PGS+ A L+ G ++A+ VL AY+L RPPGHH A G+C L N
Sbjct: 100 DHAPIGPGSYEIARLSAGLAMAAVDCVLRSEADNAYSLSRPPGHHCLADQAMGFCMLANI 159
Query: 171 GLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+A++ A G +V V+D DVH+GNGT + VL++SLH + + P + G
Sbjct: 160 PIAIEAARARHGIERVAVVDWDVHHGNGTQAIYEERGDVLSVSLHQEN-CFPPGY---GG 215
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
+ G G G G NLN+PLP G+G Y+ A+ E+V+PA+++F P +I++ G D++A DP
Sbjct: 216 AADRGRGAGLGANLNVPLPAGSGHDAYLQALDEIVLPALRRFRPQLIIVACGYDANAVDP 275
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
R L +R M +R A++ GRL++V EGGY Y +C A LE + + A
Sbjct: 276 LARMLLHSGSFRAMTARLREAAEQLCDGRLVLVHEGGYAEAYVPFCGLAVLEELSGIRTA 335
Query: 350 LLSDPIAYY 358
+ DP+ +
Sbjct: 336 -VEDPLLEF 343
>gi|384917228|ref|ZP_10017357.1| Deacetylase family enzyme [Methylacidiphilum fumariolicum SolV]
gi|384525376|emb|CCG93230.1| Deacetylase family enzyme [Methylacidiphilum fumariolicum SolV]
Length = 314
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 158/282 (56%), Gaps = 8/282 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HP+ +RI +++ LK + W PA + +LS HTP+Y+ ++ + ++
Sbjct: 22 HPDAPNRISSVLPKLKDA-FGDSLLWIEPSPASLDWVLSVHTPEYVEKVKKTQIVPMVLL 80
Query: 110 CDGTVLNPG-SWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
G G S+ ALLAVG L A+ V+ K A+ LVRPPGHHA P A G+C N
Sbjct: 81 DWGDTYAHGPSFDVALLAVGAALEAVDKVITKQIKNAFCLVRPPGHHALPNSAMGFCIFN 140
Query: 169 NAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
G+A + A+ N G +++++D DVH+GNGT + FY +V ISLH P +P
Sbjct: 141 TVGIAARYAIKNYGIKRILILDWDVHHGNGTQDIFYEDPQVYFISLHQF-----PYYPGT 195
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G ++G+G G GY +NI + G D+ YV A V+PAI K++P +I + G D+
Sbjct: 196 GKASDIGKGAGEGYTMNICMHRGATDKEYVEAFHTKVLPAIDKYKPEIIFISAGFDAHKD 255
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP G CLT GY M +++++ A ++ G+++ V EGGY+
Sbjct: 256 DPLGEICLTEQGYETMTQLLKNAAQKHCEGKIISVLEGGYNT 297
>gi|52352410|gb|AAU43699.1| acetoin utilization protein [uncultured archaeon GZfos26D8]
Length = 351
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 166/307 (54%), Gaps = 15/307 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE ++R++ I+ L+ I+ + A QL H P+YI E+ + GG +
Sbjct: 23 HPETAERLRAIIRKLEETGIAEKLRRIVPTKASKEQLRYVHAPEYIKEVEAMCRRGGGAL 82
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCFL 167
T L ++ ALLA G + A+ V+D K +AL+RPPGHHA P G+C
Sbjct: 83 DPDTPLCADTYEIALLAAGGVIKAVDEVMDESNSLKHVFALIRPPGHHATPNKGMGFCIF 142
Query: 168 NNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A + L G +V++ D DVH+GNGT F+ VL S H P +P
Sbjct: 143 NNIAIAAEHLKREYGINRVLIADWDVHHGNGTQRMFFDDASVLYFSTHQY-----PHYPG 197
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G +DE+G GEG G+ +N PLP GT D Y++A++ ++VP +F P+ +++ VG D+ A
Sbjct: 198 TGWIDEVGTGEGEGFTVNAPLPAGTDDDSYLYALSNILVPIAMEFRPDFVLVSVGFDAHA 257
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP +T G+ +++ +A++ S GR+++ EGGY+ L+A E L++
Sbjct: 258 ADPLASMNVTSRGFGRFTSLIKDIAEKNSHGRIVMALEGGYN-------LNAIAESALSV 310
Query: 347 PLALLSD 353
+LLSD
Sbjct: 311 FNSLLSD 317
>gi|448451263|ref|ZP_21592746.1| histone deacetylase superfamily protein [Halorubrum litoreum JCM
13561]
gi|445810697|gb|EMA60713.1| histone deacetylase superfamily protein [Halorubrum litoreum JCM
13561]
Length = 334
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 174/342 (50%), Gaps = 33/342 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+ D L+HDTG E+HPEN DR++ I L + Y+ P
Sbjct: 5 YSDRCLDHDTG----------------ERHPENPDRLRAIRRGLAKRHGVEYVEAE---P 45
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A+ + + H PDY++EL GG TV + G+W AAL + G A + L G
Sbjct: 46 AEKAAVTAVHDPDYVDELESFVADGGGSWDPDTVASDGTWDAALTSAGLAQWAAREALTG 105
Query: 141 HG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNG 197
+ +A+ RPPGHHA A G+CF NNA +A Q AL+ G +V + D DVH+GNG
Sbjct: 106 STGRQTPFAVGRPPGHHAVTDDAMGFCFFNNAAVAAQTALDEGLADRVAIFDWDVHHGNG 165
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + FY V S+H + +P G +DE GEG+G G N+PL G GD Y+
Sbjct: 166 TQDIFYDRGDVFYASIHED-----GLYPDTGDLDETGEGDGEGATANLPLAAGAGDADYL 220
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+A+ E + PA+ +F+P+++++ G D+ DP R ++ +GY + +RSLAD
Sbjct: 221 YAVDEGIAPAVDRFDPDLLIVSAGFDAHRHDPISRMRVSSEGYALLTDRIRSLADDVGAA 280
Query: 318 RLLIVQEGGYHVTYSA---YCLHATLEGVLNLPLALLSDPIA 356
++ EGGY + A +H T +G P+A DP A
Sbjct: 281 NAYVL-EGGYGLDTLAEGVSMVHETYDG--RTPVATDEDPDA 319
>gi|383458397|ref|YP_005372386.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
gi|380730921|gb|AFE06923.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
Length = 348
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 13/306 (4%)
Query: 40 DPGFLE--VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINE 97
DP FL+ E HPE+ R++ I+ +L R PI+ + H A ++L+ HTP +++
Sbjct: 15 DPLFLQHDAGEGHPESPARLRRILQMLARNPIAGTVMTHPR-SATDAEILAVHTPAHLDA 73
Query: 98 LVEADKAGGKM--VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
+ +K GG+ + + TV++P S AA LA G + A++ V+ G + A+ALVRPPGHH
Sbjct: 74 M---EKLGGRFERIDEDTVVSPDSIDAARLAAGAAVQAVEAVMAGTARNAFALVRPPGHH 130
Query: 156 AQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A+P A G+C NN +A + G +V+V+D DVH+GNGT F+ VL S+H
Sbjct: 131 AEPERAMGFCLYNNVAIAAEAGRRLGAERVLVLDWDVHHGNGTQAAFWGRRDVLYQSVHQ 190
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
P +P +G E+G GEG G+ +N LP G D Y EL++P Q + P++
Sbjct: 191 F-----PYYPGSGAAPEVGRGEGQGFTVNCGLPGGNTDADYGMIFEELLLPVAQAYRPDL 245
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+++ G D DP G +T G+ M VR LA+ SGG+L +V EGGY + +
Sbjct: 246 VLVSAGFDPHRADPIGGMDVTERGFAAMCTAVRKLAEEVSGGKLALVLEGGYSLEGLSNS 305
Query: 336 LHATLE 341
+HA +E
Sbjct: 306 VHACIE 311
>gi|147678368|ref|YP_001212583.1| deacetylases [Pelotomaculum thermopropionicum SI]
gi|146274465|dbj|BAF60214.1| deacetylases [Pelotomaculum thermopropionicum SI]
Length = 355
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 176/333 (52%), Gaps = 16/333 (4%)
Query: 39 FDPGFLEVLEKH--PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN 96
+D +L+ E H PE+ R+K+ ILK + + PA + ++ H P YI
Sbjct: 15 YDAAYLD-HETHGCPESPARVKHTYEILKIAGMLEKLVTIKPRPATVEEVSLVHLPAYIE 73
Query: 97 ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA 156
+ E K GG + T +P ++ ALLA G TLSA++ VL+G + A+ALVRPPGHHA
Sbjct: 74 RVKEFSKRGGGSFGNNTTGSPETFETALLAAGGTLSAVEAVLEGRVESAFALVRPPGHHA 133
Query: 157 QPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
+P A GYCF NNA +A + A+ G +V++ID D H+GNGT E FY VL S+H
Sbjct: 134 RPGQAMGYCFFNNAAIAARYAIKRYGLSRVLIIDWDEHHGNGTEEIFYSDPSVLYFSVHR 193
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+ W S+P G + G+GEG G+N+N+PLP +GD Y H ++ P + P +
Sbjct: 194 D---W--SYPGTGQAAKAGDGEGKGFNINVPLPKRSGDADYEHVFRRILRPVALAYRPQL 248
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+++ G D+ D G+ LT GY + IV +A GG L V EGGY+ A
Sbjct: 249 VLVSAGFDAHRDDLIGQMSLTPYGYMALTGIVCEIAT-CCGGALAAVLEGGYNPGALAES 307
Query: 336 LHATLEGVLNLPLALLSDPIAYYPEDEAFPVKV 368
+ A L + S P DE PVKV
Sbjct: 308 VFAVLHTMAGWDAGSSSQ-----PADEK-PVKV 334
>gi|421480720|ref|ZP_15928322.1| histone deacetylase family protein [Burkholderia multivorans CF2]
gi|400220527|gb|EJO51055.1| histone deacetylase family protein [Burkholderia multivorans CF2]
Length = 373
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 163/307 (53%), Gaps = 6/307 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + H PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAQLDMHGAAPAAREDLLRIHPAGYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ A++L RPPGHH + G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIAAVDAVVAERAANAFSLSRPPGHHCLRDRSMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G G+V VID DVH+GNGT +Y LTISLH + P G
Sbjct: 158 IPIAIEAARAKHGIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYG 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
++ G G G G NLN+PL G+GD Y HA +V+PA+++F P +IV+ G D+SA D
Sbjct: 214 GAEDRGAGAGVGANLNVPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + +
Sbjct: 274 PLARMLLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGVRT 333
Query: 349 ALLSDPI 355
A++ DP+
Sbjct: 334 AVV-DPM 339
>gi|188026250|ref|ZP_02961447.2| hypothetical protein PROSTU_03475 [Providencia stuartii ATCC 25827]
gi|188022229|gb|EDU60269.1| histone deacetylase family [Providencia stuartii ATCC 25827]
Length = 376
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 178/333 (53%), Gaps = 13/333 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S++ +S + S PA LL H +Y+ + GG ++
Sbjct: 45 HAESPETKRRLKSLMDVSGLSRSLILSSAEPATEETLLKIHPQEYLTRFKQVSDNGGGLL 104
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
L PGS+ A L+VG +A++ VL G AY+L RPPGHH P + G+CFL N
Sbjct: 105 GKEAPLGPGSYEIAKLSVGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDESMGFCFLAN 164
Query: 170 AGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
LA++ A ++ VID DVH+GNGT F+ + VLTIS+H + G + P +
Sbjct: 165 IPLAIERAKTLFSIERIAVIDWDVHHGNGTQHIFWDRSDVLTISIHQD-GCFPPGYSGED 223
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+ YN+NIPL G G Y++AM ++V+PA+ +F+P +I++ G D++A D
Sbjct: 224 DIGGGDGTG---YNINIPLLAGAGHNSYIYAMEQIVIPALARFKPELIIVASGYDANAMD 280
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R+M R+V + AD G+L+IV EGGY Y +C A +E + +
Sbjct: 281 PLARMQLHSESFRDMTRLVMNAADSLCDGKLVIVHEGGYSEAYVPFCGLAVIEEMSGVRT 340
Query: 349 ALLSDPIAYY-------PEDEAFPVKVIESIKQ 374
++DP+ + E E F ++++ +K+
Sbjct: 341 E-VADPLLDFIRLQQPRAEFEHFQQQLLDKLKK 372
>gi|386742219|ref|YP_006215398.1| histone deacetylase family protein [Providencia stuartii MRSN 2154]
gi|384478912|gb|AFH92707.1| histone deacetylase family protein [Providencia stuartii MRSN 2154]
Length = 370
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 178/333 (53%), Gaps = 13/333 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S++ +S + S PA LL H +Y+ + GG ++
Sbjct: 39 HAESPETKRRLKSLMDVSGLSRSLILSSAEPATEETLLKIHPQEYLTRFKQVSDNGGGLL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
L PGS+ A L+VG +A++ VL G AY+L RPPGHH P + G+CFL N
Sbjct: 99 GKEAPLGPGSYEIAKLSVGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDESMGFCFLAN 158
Query: 170 AGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
LA++ A ++ VID DVH+GNGT F+ + VLTIS+H + G + P +
Sbjct: 159 IPLAIERAKTLFNIERIAVIDWDVHHGNGTQHIFWDRSDVLTISIHQD-GCFPPGYSGED 217
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+ YN+NIPL G G Y++AM ++V+PA+ +F+P +I++ G D++A D
Sbjct: 218 DIGGGDGTG---YNINIPLLAGAGHNSYIYAMEQIVIPALARFKPELIIVASGYDANAMD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L + +R+M R+V + AD G+L+IV EGGY Y +C A +E + +
Sbjct: 275 PLARMQLHSESFRDMTRLVMNAADSLCDGKLVIVHEGGYSEAYVPFCGLAVIEEMSGVRT 334
Query: 349 ALLSDPIAYY-------PEDEAFPVKVIESIKQ 374
++DP+ + E E F ++++ +K+
Sbjct: 335 E-VADPLLDFIRLQQPRAEFEHFQQQLLDKLKK 366
>gi|268317499|ref|YP_003291218.1| histone deacetylase superfamily protein [Rhodothermus marinus DSM
4252]
gi|262335033|gb|ACY48830.1| histone deacetylase superfamily [Rhodothermus marinus DSM 4252]
Length = 343
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 166/328 (50%), Gaps = 8/328 (2%)
Query: 38 GFDPGFLEVLEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN 96
GF+P E H E +R++ I L P + + + H Y+
Sbjct: 6 GFNPSHARHYEPGHVERPERLEAIRERLSSSPNWNRLQHVEPLAVDLDVARLVHRRTYLE 65
Query: 97 ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA 156
L +A + T + P S AL AVGT L+ + VLDGH +A +RPPGHHA
Sbjct: 66 RLQQALHRAPTRLDPDTYVQPESLTVALEAVGTLLAVTRAVLDGHADNGFAAIRPPGHHA 125
Query: 157 QPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
P A G+C L+N +AV+ A + G +V ++D DVH+GNGT E FY VL IS+H
Sbjct: 126 TPERAMGFCLLSNVAIAVRWAQQTFGVERVAIVDFDVHHGNGTQEVFYEDPNVLFISVHQ 185
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
P +P G ++E+GEG G G +N+PLP TGD GY+ L+ P +++F P +
Sbjct: 186 F-----PHYPGTGRMEEIGEGRGRGTTVNVPLPPFTGDAGYLEVFRRLLGPIVRRFRPEV 240
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+ + G D+ DP LT+ G+ ++ + AD Y RL+ EGGY A
Sbjct: 241 LFVSAGYDAHWRDPLSAMQLTVAGFAQLVYELMEWADAYCDNRLIAALEGGYDAEALAAS 300
Query: 336 LHATLEGVLNLPLALLSDPIAYYPEDEA 363
+ AT+ +L+ P+A + DPI P + A
Sbjct: 301 VDATVVRLLD-PVAEIEDPIGPSPHEPA 327
>gi|107028890|ref|YP_625985.1| histone deacetylase superfamily protein [Burkholderia cenocepacia
AU 1054]
gi|116689952|ref|YP_835575.1| histone deacetylase superfamily protein [Burkholderia cenocepacia
HI2424]
gi|105898054|gb|ABF81012.1| histone deacetylase superfamily [Burkholderia cenocepacia AU 1054]
gi|116648041|gb|ABK08682.1| histone deacetylase superfamily [Burkholderia cenocepacia HI2424]
Length = 369
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 158/307 (51%), Gaps = 6/307 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + +S+++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRFLSLVQASGLAAQLDLRGAEPATTADLLRIHPAHYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G + A+ V+ A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIVAVDAVVGERAANAFSLSRPPGHHCLRDRPMGFCMLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPVAIEAARAKHGIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D+ GEG G G NLN+PL G+GD Y +A +V+PA+ +F P +IV+ G D+SA D
Sbjct: 214 GADDRGEGAGIGANLNVPLLAGSGDDAYRYAFERIVLPALARFRPELIVIASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + +
Sbjct: 274 PLARMQLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGIRT 333
Query: 349 ALLSDPI 355
A ++DP+
Sbjct: 334 A-VTDPM 339
>gi|52548847|gb|AAU82696.1| acetoin utilization protein [uncultured archaeon GZfos19A5]
Length = 351
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 166/307 (54%), Gaps = 15/307 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE ++R++ I+ L+ I+ + A QL S H P+YI E+ + GG +
Sbjct: 23 HPETAERLRVIIRKLEETGIAEKLRRIVPTKASKEQLRSVHAPEYIKEVEAICRRGGGAL 82
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCFL 167
T L ++ A+LA G A+ V+D K +AL+RPPGHHA P G+C
Sbjct: 83 DPDTPLCADTYEIAMLAAGGVTKAVDEVMDESNSLKHVFALIRPPGHHATPNKGMGFCIF 142
Query: 168 NNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A + L G +V++ D DVH+GNGT E F+ VL S H P +P
Sbjct: 143 NNIAIAAEHLKREYGINRVLIADWDVHHGNGTQEVFFDDASVLYFSTHQY-----PHYPG 197
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G +DE+G GEG G+ +N PLP GT D Y++A++ ++VP +F P+ +++ VG D+ A
Sbjct: 198 TGWIDEVGTGEGEGFTVNAPLPAGTDDDSYLYALSNILVPIAMEFRPDFVLVSVGFDAHA 257
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP +T G+ +++ +A + S GR+++ EGGY+ L+A E L++
Sbjct: 258 ADPLASMNVTSRGFGRFTSLLKDIAGKNSHGRIVMALEGGYN-------LNAIAESALSV 310
Query: 347 PLALLSD 353
+LLSD
Sbjct: 311 FNSLLSD 317
>gi|52549274|gb|AAU83123.1| acetoin utilization protein [uncultured archaeon GZfos26F9]
Length = 351
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 165/307 (53%), Gaps = 15/307 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE ++R++ I+ L+ I+ + A QL H P+YI E+ + GG +
Sbjct: 23 HPETAERLRAIIRKLEETGIAEKLRRIIPTKASKEQLRYVHAPEYIEEVEAMCRRGGGAL 82
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCFL 167
T L ++ ALLA G A V+D K +AL+RPPGHHA P G+C
Sbjct: 83 DPDTPLCEATYEIALLATGGVTKAGDEVMDESNSLKHVFALIRPPGHHATPNKGMGFCIF 142
Query: 168 NNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A + L G +V++ D DVH+GNGT F+ VL S H P +P
Sbjct: 143 NNIAIATEHLKREYGINRVLIADWDVHHGNGTQRMFFDGASVLYFSTHQY-----PHYPG 197
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G +DE+G+GEG G+ +N+PLP GT D GY++A+ ++VP +F P+ +++ +G D+ A
Sbjct: 198 TGWIDEVGKGEGEGFTVNVPLPAGTDDDGYLYALNNILVPIAMEFSPDFVLVSIGFDAHA 257
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP +T G+ +++ +A + S GR+++ EGGY+ L+A E L++
Sbjct: 258 ADPLASMNVTSRGFGRFKSLIKDIAGKNSHGRIVMALEGGYN-------LNAIAESALSV 310
Query: 347 PLALLSD 353
+LLSD
Sbjct: 311 FNSLLSD 317
>gi|296118475|ref|ZP_06837053.1| histone deacetylase family protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295968374|gb|EFG81621.1| histone deacetylase family protein [Corynebacterium ammoniagenes
DSM 20306]
Length = 374
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 174/343 (50%), Gaps = 10/343 (2%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ WD DTG G F L+ + +H + D + +++ + ++
Sbjct: 5 VGYLWDTLYGWMDTGSGGFVPADPAAGLQPIGRHLAHPDTKRRFHEVVQTSALRDQLTNL 64
Query: 77 SGIPAQIPQLLSFHTPDYINELVE--ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
PA LL HT ++I + + + GG + L G + LLA G + A
Sbjct: 65 QAQPASEEDLLRVHTAEHIEYIKDQSSQPKGGDAGDGASPLGKGGYEIGLLAAGGAIQAT 124
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVH 193
K VL G AYAL+ PPGHHA+ G+C NNA +A A + G +V V+D DVH
Sbjct: 125 KSVLTGEVDTAYALINPPGHHAERERGMGFCLFNNASVAAAYAKEHHGLTRVAVVDWDVH 184
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTG 252
+GNGT + ++ + VLTISLH N P N G ++ G + G LNIPLP G+G
Sbjct: 185 HGNGTQQIWWDNPDVLTISLHQNK-----CFPANSGFREDNGGPDALGTALNIPLPPGSG 239
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
+ Y A E+V+PA++ F+P +I++ G D+SA DP RQ +T DG+++M ++ S AD
Sbjct: 240 NAVYNLAFEEVVLPALEAFQPELIIVASGFDASAMDPLARQMVTQDGFKQMTEMIVSAAD 299
Query: 313 RYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
G+L+ VQEGGY Y C LE VL + DP
Sbjct: 300 SICDGKLVFVQEGGYSPYYLPICGLGVLE-VLTQTESGFGDPF 341
>gi|416927278|ref|ZP_11933159.1| histone deacetylase superfamily protein [Burkholderia sp. TJI49]
gi|325526237|gb|EGD03861.1| histone deacetylase superfamily protein [Burkholderia sp. TJI49]
Length = 369
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 151/293 (51%), Gaps = 5/293 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + +S+++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRFLSLVQASGLAAQLDMRGAEPATAVDLLRIHPAHYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIAAVDAVVGERAANAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHGIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D+ GEG G G NLN+PL G+GD Y HA +V+PA+ +F P +IV+ G D+SA D
Sbjct: 214 GADDRGEGAGVGANLNVPLLAGSGDDAYRHAFERIVLPALDRFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
P R L D YR M R ++ A R+ GGRL+IV EGGY Y +C A +E
Sbjct: 274 PLARMQLYTDSYRFMTRALKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVE 326
>gi|225180858|ref|ZP_03734306.1| histone deacetylase superfamily [Dethiobacter alkaliphilus AHT 1]
gi|225168339|gb|EEG77142.1| histone deacetylase superfamily [Dethiobacter alkaliphilus AHT 1]
Length = 318
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 175/330 (53%), Gaps = 22/330 (6%)
Query: 57 IKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTP---DYINELVEADKAGGKMVCDGT 113
++ I+++LK+ + + + +PA + ++ HT DY+++L + K + T
Sbjct: 1 MQAILTLLKQQNLFDKLEQLAPMPASVDEVAKVHTRQHIDYVHKLCQQHK---PQLDPDT 57
Query: 114 VLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLA 173
L P S+ LL+ G L+AM+ V+ G+ +A++ RPPGHHA+P A G+C NN +A
Sbjct: 58 YLTPESYDVGLLSAGGALTAMRAVMRGNLDVAFSFGRPPGHHAEPHRAMGFCLFNNMAIA 117
Query: 174 VQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDE 232
+ A G +++++D DVH+GNGT + FY VL +S H + P P G + E
Sbjct: 118 ARHAQEEFGLSRIMILDWDVHHGNGTQKAFYHDPGVLFVSPHQS-----PLFPGTGHLKE 172
Query: 233 LGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGR 292
GEG G GYN+NIPLP G GD Y TE++ P +F P ++++ GQDS DP
Sbjct: 173 KGEGAGEGYNVNIPLPPGCGDEVYSQVFTEIIRPLADRFRPELLMVSAGQDSYHNDPVAS 232
Query: 293 QCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLS 352
L+ G+ M R R +A+ Y G++++ EGGYH+ A + L L+
Sbjct: 233 MNLSFAGFAMMARHARQIAEEYCDGKVVLTLEGGYHLGGLAEAVVTILS-----ELSGWD 287
Query: 353 DPIAYYPEDEAFPV-----KVIESIKQYQN 377
P+ + P A P+ ++I +K + N
Sbjct: 288 RPLNHEPAPPAEPIYDDPFRIIGEVKAFHN 317
>gi|83953364|ref|ZP_00962086.1| deacetylase / probable acetylpolyamine aminohydrolase
[Sulfitobacter sp. NAS-14.1]
gi|83842332|gb|EAP81500.1| deacetylase / probable acetylpolyamine aminohydrolase
[Sulfitobacter sp. NAS-14.1]
Length = 368
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 173/322 (53%), Gaps = 14/322 (4%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L ++PE R++N++ + + + S PA LL H Y+++ AGG
Sbjct: 37 LPENPETKRRLRNLMEVTG---LMAELDLRSAAPATRDDLLRVHPAAYLDDFKRLSDAGG 93
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T G + A L+ G +++A++ V G AYAL RPPGHHA P +G+C
Sbjct: 94 GELGLRTPFAAGGFEIAALSAGLSIAAVEAVAKGDLDNAYALSRPPGHHALPDFPNGFCL 153
Query: 167 LNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A G +V V+D DVH+GNGT FY + VLTISLH G
Sbjct: 154 LANIAIAIEAAKAKGLVRRVAVLDWDVHHGNGTEAIFYDRDDVLTISLHQE----GNYPL 209
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + + G G G GYN+N+P+ G+G Y+HA+ +V+PA+ ++P+MI++ G D+S
Sbjct: 210 DTGALADRGNGAGAGYNINLPMHAGSGHTAYLHALDRVVLPALDAYQPDMIIVACGFDAS 269
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
DP R T + + EM + +++ A + GG+L++V EGGY Y +C HAT+ + +
Sbjct: 270 IVDPLARMQATAETFAEMTQRIKAAAQKLCGGKLVLVHEGGYSEAYVPFCGHATIAALAD 329
Query: 346 LPLALLSDPIAYYPEDEAFPVK 367
SD A P + F ++
Sbjct: 330 ------SDITAPDPHAKNFRIR 345
>gi|91203564|emb|CAJ71217.1| similar to histone deacetylase [Candidatus Kuenenia
stuttgartiensis]
Length = 313
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 172/330 (52%), Gaps = 24/330 (7%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ +D+ L HDTG G HPEN+ RI+N + L+ +++
Sbjct: 4 LIYDNIYLEHDTGIG----------------HPENARRIENTIKYLESDNFLAHVTIEKP 47
Query: 79 IPAQIPQLLSF-HTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHV 137
A +P+ + F H YI+ + + +GG + T ++ S+ AL + G L+A+ +
Sbjct: 48 -RAALPEEIGFIHPKTYISTIQQIADSGGGWLDGDTAVSGHSYNVALYSAGAALTAIDLI 106
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGN 196
+ G K A+ LVRPPGHHA P G+C NN +A + L N ++++ID DVH+GN
Sbjct: 107 MKGEAKNAFCLVRPPGHHATPDRGMGFCLFNNVAIAARYLQKNYQQKRILIIDWDVHHGN 166
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY V+ S+H P +P G DE GEG G G+N+NIPL T + Y
Sbjct: 167 GTQDAFYVDPTVMYFSMHRY-----PFYPGTGAEDETGEGNGKGFNINIPLSMDTHPQKY 221
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ + ++ ++ +F P I+L G D+ DP G L + + + IV A+++ G
Sbjct: 222 IELFSGVIEGSVNRFAPEFIILSSGFDAYKKDPIGGLNLETEHFYTLTEIVVEAAEKHCG 281
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
G+LL EGGYH++ C+ A L+G+L +
Sbjct: 282 GKLLSCLEGGYHLSGLPLCIEAHLKGLLKI 311
>gi|398346206|ref|ZP_10530909.1| acetoin-histone deacetylase [Leptospira broomii str. 5399]
Length = 339
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 166/320 (51%), Gaps = 27/320 (8%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
++D L HDTG E HPE +R++ I++ L + ++ S P
Sbjct: 38 YEDIFLQHDTG----------------EYHPERPERLEAIMNRLIKTSYFKNLTHIS--P 79
Query: 81 AQIPQ--LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
++P+ +LS H Y V + G D T +P S+ AALLA G+ +S K +L
Sbjct: 80 EKLPEELILSAHNRTYQERFVAIEGKRGGFDGD-TPFSPKSFEAALLAAGSGVSLAKQIL 138
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGT 198
AL+RPPGHHA+ A G+C LNN + LN +V ++D DVH+GNGT
Sbjct: 139 SEDLDSGIALIRPPGHHAETGRAMGFCLLNNIAITAHYLLNRNIRRVYILDWDVHHGNGT 198
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
E FY S+KV SLH P +P +G+ E+G G+G G+ LNIPLP + + Y+
Sbjct: 199 QEIFYDSDKVFFTSLHQY-----PFYPGSGSAREIGSGQGLGFTLNIPLPGSSSNSDYLQ 253
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A E V+P+I +FEP +++ G D+ DP G L+ + + E R+ + A + SG +
Sbjct: 254 AFQEKVIPSILEFEPEFLLISAGFDAHKQDPLGGMSLSTNAFSEFTRLAKEAASQ-SGSK 312
Query: 319 LLIVQEGGYHVTYSAYCLHA 338
++ EGGY + A + A
Sbjct: 313 IISFLEGGYDLQALAESVEA 332
>gi|148556150|ref|YP_001263732.1| histone deacetylase superfamily protein [Sphingomonas wittichii
RW1]
gi|148501340|gb|ABQ69594.1| histone deacetylase superfamily [Sphingomonas wittichii RW1]
Length = 369
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 166/329 (50%), Gaps = 13/329 (3%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCD 111
+ D + ++++ + ++ IPA + + H DYI+ AGG +
Sbjct: 40 DTPDSKRRLLNLAHASGLIRKLTLPEAIPATVEDVCRVHPRDYIDRFKATSDAGGGDLGH 99
Query: 112 GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAG 171
+ G + A+L+ G ++A+ VL G AYAL RP GHH G+C L N
Sbjct: 100 LAPFSKGGYEIAMLSCGLAIAAVDDVLSGKVDNAYALCRPAGHHCLADTPMGFCLLANIP 159
Query: 172 LAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTV 230
+A++ A G +V V+D DVH+GNGT FY VLTIS+H + P
Sbjct: 160 IAIEAAKARHGISRVAVVDWDVHHGNGTQSIFYDRADVLTISIHQDRCF----PPGYSGA 215
Query: 231 DELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPN 290
++ GEG G GYNLN+PLP G G YV A +VVPA+ F+P +I++ G D+++ DP
Sbjct: 216 EDRGEGAGLGYNLNVPLPAGAGHDAYVQAFDNIVVPALDDFKPELIIVASGLDANSVDPL 275
Query: 291 GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLAL 350
R L + YR + + + A R GG+L++V EGGY Y +C HA LE + A+
Sbjct: 276 ARMLLHSESYRLLTQKMLDAAARLCGGKLVVVHEGGYAEAYVPFCGHALLEALSGERTAV 335
Query: 351 LSDPIAYY-------PEDEAFPVKVIESI 372
+ DP+ PE AF + I+ +
Sbjct: 336 V-DPVLEMAEAWQPGPEAAAFHRQWIDRL 363
>gi|170733290|ref|YP_001765237.1| histone deacetylase superfamily protein [Burkholderia cenocepacia
MC0-3]
gi|169816532|gb|ACA91115.1| histone deacetylase superfamily [Burkholderia cenocepacia MC0-3]
Length = 369
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 157/307 (51%), Gaps = 6/307 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + +S+++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRFLSLVQASGLAAQLDLRGAEPATTADLLRIHPAHYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G + A+ V+ A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIGAVDAVVGERAANAFSLSRPPGHHCLRDRPMGFCMLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHGIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D+ GEG G G NLN+PL G+GD Y +A +V+PA+ +F P +IV+ G D+SA D
Sbjct: 214 GADDRGEGAGIGANLNVPLLAGSGDDAYRYAFERIVLPALARFRPELIVIASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GRL+IV EGGY Y +C A +E + +
Sbjct: 274 PLARMQLHTDSYRFMTRAVKEAAQRHCSGRLVIVHEGGYSEAYVPFCGLAIVEELAGIRT 333
Query: 349 ALLSDPI 355
A ++DP+
Sbjct: 334 A-VADPM 339
>gi|448513829|ref|ZP_21616760.1| histone deacetylase superfamily protein [Halorubrum distributum JCM
9100]
gi|448526661|ref|ZP_21619930.1| histone deacetylase superfamily protein [Halorubrum distributum JCM
10118]
gi|445692982|gb|ELZ45145.1| histone deacetylase superfamily protein [Halorubrum distributum JCM
9100]
gi|445698888|gb|ELZ50926.1| histone deacetylase superfamily protein [Halorubrum distributum JCM
10118]
Length = 334
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 173/342 (50%), Gaps = 33/342 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+ D L+HDTG E+HPEN DR++ I L + Y+ P
Sbjct: 5 YSDRCLDHDTG----------------ERHPENPDRLRAIRRGLAKRHGVEYVE---ADP 45
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A+ + + H PDY++EL GG TV + G+W AAL + G A + L G
Sbjct: 46 AEKAAVTAVHDPDYVDELESFVADGGGSWDPDTVASDGTWDAALTSAGLAQWAAREALTG 105
Query: 141 HG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNG 197
+ +A+ RPPGHHA A G+CF NNA +A Q AL+ +V + D DVH+GNG
Sbjct: 106 STGRQTPFAVGRPPGHHAVTDDAMGFCFFNNAAVAAQTALDEDLADRVAIFDWDVHHGNG 165
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + FY V S+H + +P G +DE GEG+G G N+PL G GD Y+
Sbjct: 166 TQDIFYDRGDVFYASIHED-----GLYPDTGDLDETGEGDGEGATANLPLAAGAGDADYL 220
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+A+ E + PA+ +F+P+++++ G D+ DP R ++ +GY + +RSLAD
Sbjct: 221 YAVDEGIAPAVDRFDPDLLIVSAGFDAHRHDPISRMRVSSEGYALLTDRIRSLADDVGAA 280
Query: 318 RLLIVQEGGYHVTYSA---YCLHATLEGVLNLPLALLSDPIA 356
++ EGGY + A +H T +G P+A DP A
Sbjct: 281 NAYVL-EGGYGLDTLAEGVSMVHETYDG--RTPVATDEDPDA 319
>gi|338532993|ref|YP_004666327.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
gi|337259089|gb|AEI65249.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
Length = 341
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 12/302 (3%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG + HPE+ R++ I+ +L P+ + + A +L S HTP+ + L
Sbjct: 16 DPG-----QGHPESPSRLRRILGVLASTPVKGTV-MTAPRSATAAELASVHTPELLAYLA 69
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
++ D T ++P S AA LA G ++ A++ V+ G + A+ALVRPPGHHA+P
Sbjct: 70 SLSGHVSQLDPD-THVSPDSIDAARLAAGASVQAVEAVMRGEARNAFALVRPPGHHAEPD 128
Query: 160 MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
A G+C NNA +A + G +V+V+D DVH+GNGT F+ V+ S+H
Sbjct: 129 KAMGFCLYNNAAIAAEAGRKLGAERVLVLDWDVHHGNGTQAAFWSRRDVMYQSVHQF--- 185
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P +P G E G GEG GY +N+ LP G D Y EL++P + + P +I++
Sbjct: 186 --PYYPGTGAAQETGTGEGEGYTVNVGLPGGNSDADYGMIFEELLLPVAEAYRPQLILVS 243
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G DS DP G ++ G+ M ++SLAD GRL+++ EGGY + + +HA
Sbjct: 244 AGFDSHQHDPIGGMDVSERGFAAMCSAMKSLADSVCQGRLVLLLEGGYSLEGLSQSVHAC 303
Query: 340 LE 341
+E
Sbjct: 304 VE 305
>gi|222478548|ref|YP_002564785.1| histone deacetylase superfamily [Halorubrum lacusprofundi ATCC
49239]
gi|222451450|gb|ACM55715.1| histone deacetylase superfamily [Halorubrum lacusprofundi ATCC
49239]
Length = 334
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 174/341 (51%), Gaps = 35/341 (10%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGI 79
+ D L HDTG E+HPEN DR++ I +RG + + +
Sbjct: 5 YSDRCLEHDTG----------------ERHPENPDRLRAI----RRGLAKRHGVEYAEAD 44
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA ++++ H +Y++EL GG TV + G+W AAL + G A + L+
Sbjct: 45 PATREEVVAVHDAEYVDELEAFVADGGGSWDPDTVASEGTWDAALASAGLAQWAARSALN 104
Query: 140 GHG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGN 196
G +AL RPPGHHA P A G+CF NNA +A Q L+ G +V V D DVH+GN
Sbjct: 105 GADGRDTPFALGRPPGHHAVPDDAMGFCFFNNAAVAAQTVLDDGAADRVAVFDWDVHHGN 164
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY VL S+H + +P G +DE G EG G +N+PL G GD Y
Sbjct: 165 GTQDVFYDRGDVLYASIHED-----GLYPDTGALDETGHDEGAGTTVNLPLSAGAGDADY 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
++A+ E+V PAI++F+P+++++ G D+ DP R ++ +GY M +R++ D
Sbjct: 220 LYAIDEVVAPAIKRFDPDLVIVSAGFDAHRHDPISRMRVSSEGYALMTDRIRTVTDNIEA 279
Query: 317 GRLLIVQEGGYHVTYSA---YCLHATLEGVLNLPLALLSDP 354
++ EGGY + A +H T +G P+ DP
Sbjct: 280 ANSYVL-EGGYGLDTLAEGVSMVHETFDG--RTPVGDDDDP 317
>gi|407694185|ref|YP_006818973.1| histone deacetylase superfamily [Alcanivorax dieselolei B5]
gi|407251523|gb|AFT68630.1| Histone deacetylase superfamily [Alcanivorax dieselolei B5]
Length = 369
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 172/335 (51%), Gaps = 21/335 (6%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLE---KHPENSDRIKNIVSILKR----GPI 69
I WD DTG G L+ + HP+ R ++S + PI
Sbjct: 3 IGYMWDTLYGWVDTGTGSLTGANLAARLQPISHHLAHPDTKRRFHELISTSGQLDHMTPI 62
Query: 70 SPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGGKMVCDGTVLNPGSWGAALLAV 127
P +PA+ +L HT +++ + V A + GG T L G A+LA
Sbjct: 63 KP-------LPARDEDILRVHTGEHLENVRRVSALEHGGDAGDGVTYLGNGGLEIAMLAA 115
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVV 186
G + +K ++ G YALV PPGHHA A G+C NN +A A + G +V
Sbjct: 116 GGAIQMVKSLVQGDIDSGYALVNPPGHHAPRDGAMGFCIFNNTSVAAAYARDKLGLDRVA 175
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
++D DVH+GNGT + ++ VLTISLH H + P++G V E G G+G GYNLN+P
Sbjct: 176 IVDWDVHHGNGTQDIWWEDPSVLTISLH-QHLCF---PPESGYVGERGAGKGHGYNLNVP 231
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
+P G G+ Y++AM +V+PA+Q F P +I++ G D+S DP R +T +G+R M R
Sbjct: 232 MPPGCGNGAYLYAMETVVLPALQAFRPQLIIVGCGFDASIMDPLARMMVTSEGFRAMARR 291
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+ AD GR+L VQEGGY Y +C A ++
Sbjct: 292 IIDSADELCEGRILFVQEGGYSPHYVPFCGLAVIQ 326
>gi|319784915|ref|YP_004144391.1| histone deacetylase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170803|gb|ADV14341.1| Histone deacetylase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 373
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 175/334 (52%), Gaps = 23/334 (6%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKH---PENSDRIKNIVSI--LKRG--PISPYI 73
+ + ++ HDTG PG +H P + R+ N++ + L R PI P
Sbjct: 7 FHEQLMWHDTGSSA--DMMPPGRFVEPGRHLESPGSKRRLNNLIQVSGLSRHLVPIIPE- 63
Query: 74 SWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSA 133
P + LL HT +++++ + G + S+ ALL+ GTT +A
Sbjct: 64 ------PVSVDDLLRVHTQRHVDDIRMLSERGSGFAGPQAPIGLNSFDIALLSAGTTYAA 117
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGC-GKVVVIDIDV 192
M+ VL G AYAL RPPGHHA+P A G C +N G+AV+ + G G+ ++D DV
Sbjct: 118 MRAVLTGRVDNAYALARPPGHHAEPDQAMGNCLFSNIGVAVRRLQHEGLLGRAAIVDWDV 177
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ-NGTVDELGEGEGFGYNLNIPLPNGT 251
H+GNGT FY VLTIS+H ++ +P G + + G+ G G+N+NIPLP G+
Sbjct: 178 HHGNGTETVFYSDPSVLTISVHQDN-----LYPTGRGALADNGKDAGEGFNINIPLPAGS 232
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
G Y +V PA++ + P+++++ G D+S FDP GR L + +R + + +LA
Sbjct: 233 GTGAYEATFDRVVAPALRAYRPDLVIVASGFDASGFDPLGRMMLNSECFRRLAARMVALA 292
Query: 312 DRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
S GRL++ EGGY Y +C HA +E + N
Sbjct: 293 AETSQGRLMMTHEGGYSEGYVPFCGHAVIETLAN 326
>gi|442323459|ref|YP_007363480.1| histone deacetylase [Myxococcus stipitatus DSM 14675]
gi|441491101|gb|AGC47796.1| histone deacetylase [Myxococcus stipitatus DSM 14675]
Length = 342
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 163/304 (53%), Gaps = 9/304 (2%)
Query: 40 DPGFLE--VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINE 97
DP FL+ E HPE+ R++ I+ +L R P+ + A +L + HTP +
Sbjct: 9 DPLFLQHDPGESHPESPARLQRILGVLARAPVRGTV-MAPPRSATDAELAAVHTPQLLAR 67
Query: 98 LVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
L E + D T ++ S AA LA G ++ A++ V+ G + A+ALVRPPGHHA+
Sbjct: 68 LKELSGRRASIDPD-THVSADSVDAARLAAGASVQAVEMVMAGKARNAFALVRPPGHHAE 126
Query: 158 PTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
P A G+C LNNA +A + G +V+V+D DVH+GNGT F+ V+ S+H
Sbjct: 127 PDRAMGFCLLNNAAIAAEAGRRLGAERVLVLDWDVHHGNGTQAAFWGRRDVMYQSVHQF- 185
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIV 277
P +P G E+G G G GY +N+ LP G D Y EL++P + F P +++
Sbjct: 186 ----PYYPGTGATPEVGTGAGEGYTVNVGLPGGNSDADYGMLFEELLLPVAESFRPQLVL 241
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G D DP G +T G+ M +RSLA+R G+L+++ EGGY + + +H
Sbjct: 242 VSAGFDPHYHDPIGGMDVTERGFAAMCTAMRSLAERVCDGKLVLLLEGGYSLEGLSQSVH 301
Query: 338 ATLE 341
A +E
Sbjct: 302 ACVE 305
>gi|448444633|ref|ZP_21589923.1| histone deacetylase superfamily protein [Halorubrum saccharovorum
DSM 1137]
gi|445686046|gb|ELZ38387.1| histone deacetylase superfamily protein [Halorubrum saccharovorum
DSM 1137]
Length = 334
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 166/324 (51%), Gaps = 33/324 (10%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGIPAQIP 84
L HDTG E+HPEN DR++ I +RG + + + PA
Sbjct: 10 LEHDTG----------------ERHPENPDRLRAI----RRGLAKRHGVEYAEADPATRE 49
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG-- 142
++++ H +Y++EL GG TV + G+W AAL + G + A + LDG
Sbjct: 50 EVVAVHDAEYVDELEAFVADGGGSWDPDTVASEGTWDAALTSAGLSQWAARSALDGDDGR 109
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEG 201
+AL RPPGHHA P A G+CF NNA +A Q L+ G +V + D DVH+GNGT +
Sbjct: 110 DTPFALGRPPGHHAVPDDAMGFCFFNNAAVAAQTVLDDGAADRVAIFDWDVHHGNGTQDV 169
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY V S+H +P G +DE G EG G +N+PL G GD Y++A+
Sbjct: 170 FYDRGDVFYASIHEE-----GLYPDTGALDETGRDEGEGTTVNLPLAAGAGDADYLYAID 224
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E V PA+++F+P+++++ G D+ DP R ++ +GY M +RS+ D +
Sbjct: 225 EAVAPALERFDPDLVIVSAGFDAHRHDPISRMRVSSEGYALMTDRIRSVTDEIGAANAYV 284
Query: 322 VQEGGYHVTYSA---YCLHATLEG 342
+ EGGY + A +H T +G
Sbjct: 285 L-EGGYGLDTLAEGVSMVHETFDG 307
>gi|372272040|ref|ZP_09508088.1| histone deacetylase superfamily protein [Marinobacterium stanieri
S30]
Length = 371
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 157/296 (53%), Gaps = 8/296 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+ PE R+KN++ + +S + S A LL H Y+ GG
Sbjct: 40 ESPETKRRLKNLLDV---SGLSQSLQVSSAPVATQEDLLRVHPQTYLERFKALSDNGGGP 96
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D + PG++ AL + G +A++ V+ G AYAL RPPGHH P A G+CFL
Sbjct: 97 FGDNAPVGPGTFEIALKSAGLVCTAVEKVMRGEADNAYALSRPPGHHCLPDQAMGFCFLA 156
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A++ A +V VID DVH+GNGT +Y VL+IS+H G + P + +
Sbjct: 157 NIPVAIERAKAMFNLERVAVIDWDVHHGNGTQAVYYDRPDVLSISIH-QEGCFPPGY--S 213
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G D GEG G G NLNIPL G+G Y+HA ELV PA+++++P +I++ G D++
Sbjct: 214 GAEDR-GEGAGEGCNLNIPLLPGSGHEAYMHAFDELVTPALRQYKPQLIIVACGYDANGI 272
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
DP R D +R+M ++LA+ GRL++ EGGY Y +C A +E +
Sbjct: 273 DPLARMLAHSDTFRQMTEKTKALAEELCDGRLVLAHEGGYSEGYVPFCGLAAIEAL 328
>gi|221215046|ref|ZP_03588013.1| histone deacetylase family protein [Burkholderia multivorans CGD1]
gi|221164982|gb|EED97461.1| histone deacetylase family protein [Burkholderia multivorans CGD1]
Length = 373
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 171/338 (50%), Gaps = 10/338 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAQLDMRGAAPAARDDLLRIHPAGYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIAAVDAVVAERAANAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G G+V VID DVH+GNGT +Y LTISLH + P G
Sbjct: 158 IPIAIEAARAKHGIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYG 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
++ G G G G NLN+PL G+GD Y HA +V+PA+++F P +IV+ G D+SA D
Sbjct: 214 GAEDRGAGAGVGANLNVPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + +
Sbjct: 274 PLARMLLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGVRT 333
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
A ++DP+ D A + E +Q +I L S
Sbjct: 334 A-VADPML----DLAIAQQPGERFVAFQRTLIDELAAS 366
>gi|148657296|ref|YP_001277501.1| histone deacetylase superfamily protein [Roseiflexus sp. RS-1]
gi|148569406|gb|ABQ91551.1| histone deacetylase superfamily [Roseiflexus sp. RS-1]
Length = 344
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 174/338 (51%), Gaps = 12/338 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+H E + R+ I + L + + PA QL + HT I + +
Sbjct: 18 QHVEQAARLHAITAALNASGLRSVLLEVPARPATEAQLRAVHTEQMIEVVRWSATRPRSW 77
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T SW AAL+A GTTL+ + V+ G + +ALVRPPGHHA + G+C N
Sbjct: 78 IDHDTYTTSASWDAALMAAGTTLAVVDAVVSGSAQNGFALVRPPGHHATRAESMGFCLFN 137
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A++ G +V ++D DVH+GNGT + FY ++V S H + P +P
Sbjct: 138 NVAIAARHAIDHLGVTRVAIVDFDVHHGNGTQDIFYDDDRVFFCSTHAS-----PLYPGT 192
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E+G G G G +N+PLP+G GD G+ ++V+PA++++ P++I++ G D+
Sbjct: 193 GAEREIGSGRGRGTTMNLPLPHGVGDAGFARLFDDVVIPALRRYRPDLILVSAGYDAHWA 252
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP G L++ GY + R ++ A+ GR+ +V EGGY++ A + A LE + N
Sbjct: 253 DPLGPLTLSVAGYAALTRRLKETAEEVCNGRIALVLEGGYNLKALAASVLACLEVLANDD 312
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKG 385
+ DP + P +E P + +QN P L G
Sbjct: 313 TVV--DP--FGPSNEPEPDISALIARMHQNH--PLLAG 344
>gi|345302783|ref|YP_004824685.1| histone deacetylase superfamily [Rhodothermus marinus
SG0.5JP17-172]
gi|345112016|gb|AEN72848.1| histone deacetylase superfamily [Rhodothermus marinus
SG0.5JP17-172]
Length = 343
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 164/326 (50%), Gaps = 8/326 (2%)
Query: 38 GFDPGFLEVLEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN 96
GF+P E H E +R++ I L P + + + H Y+
Sbjct: 6 GFNPSHARHYEPGHVERPERLEAIRERLSSSPNWNRLQHVEPLAVDLDVARLVHRRTYLE 65
Query: 97 ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA 156
L +A + T + P S AL AVGT L+ + VLDGH +A +RPPGHHA
Sbjct: 66 RLQQALHRAPTRLDPDTYVQPESLTVALEAVGTLLAVTRAVLDGHADNGFAAIRPPGHHA 125
Query: 157 QPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
P A G+C L+N +AV+ A + G +V ++D DVH+GNGT E FY VL IS+H
Sbjct: 126 TPERAMGFCLLSNVAIAVRWAQQTFGVERVAIVDFDVHHGNGTQEVFYEDPNVLFISVHQ 185
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
P +P G ++E+GEG G G +N+PLP TGD GY+ L+ P +++F P +
Sbjct: 186 F-----PHYPGTGRMEEIGEGRGRGATVNVPLPPFTGDAGYLEVFRRLLGPIVRRFRPEV 240
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+ + G D+ DP LT+ G+ ++ + AD RL+ EGGY A
Sbjct: 241 LFVSAGYDAHWRDPLSAMQLTVAGFAQLVYELMEWADACCDNRLVAALEGGYDAETLAAS 300
Query: 336 LHATLEGVLNLPLALLSDPIAYYPED 361
+ AT+ +L+ PLA + DPI P +
Sbjct: 301 VEATVARLLD-PLADIEDPIGPSPHE 325
>gi|134284080|ref|ZP_01770774.1| histone deacetylase family protein [Burkholderia pseudomallei 305]
gi|134244532|gb|EBA44636.1| histone deacetylase family protein [Burkholderia pseudomallei 305]
Length = 370
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 174/326 (53%), Gaps = 25/326 (7%)
Query: 39 FDPGFLE---------------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL L +H ++ R+ +L ++ ++ + A
Sbjct: 8 FDPAFLSHRQGDLVYVVPHGTLNLGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN+N+PLP+GTGD GY H
Sbjct: 188 QAFYDDPSVLFVSLHE-----AANFPVDGGEARETGGGAGAGYNVNVPLPSGTGDAGYRH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R A GGR
Sbjct: 243 AFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
++++QEGGY + Y LEG++
Sbjct: 303 IVMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|254487719|ref|ZP_05100924.1| histone deacetylase family protein [Roseobacter sp. GAI101]
gi|214044588|gb|EEB85226.1| histone deacetylase family protein [Roseobacter sp. GAI101]
Length = 368
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 172/322 (53%), Gaps = 14/322 (4%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L ++PE R++N++ + + + S A LL H Y++E GG
Sbjct: 37 LPENPETKRRLRNLMEVTG---LMAELDVRSAPQATHDDLLRVHPAAYLDEFKRLSDTGG 93
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T G + A L+ G +++A++ V G + AYAL RPPGHHA P +G+C
Sbjct: 94 GELGLRTPFAAGGFEIAALSAGLSIAAVEAVASGDIENAYALSRPPGHHALPDFPNGFCL 153
Query: 167 LNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A G +V V+D DVH+GNGT FY + VLTISLH G
Sbjct: 154 LANIAIAIEAAKAKGLVNRVAVLDWDVHHGNGTEAIFYDRDDVLTISLHQE----GNYPL 209
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + + G+G G GYN+N+PL G+G Y+HA+ +V+PA++ F+P+MI++ G D++
Sbjct: 210 DTGALTDRGKGAGEGYNINLPLHAGSGHTAYLHALDRIVIPALEAFQPDMIIVACGFDAA 269
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
DP R T + + M R ++ + + G+L++V EGGY Y +C HAT+ + +
Sbjct: 270 IVDPLARMQATAETFAAMTRKIKETSQKLCDGKLVLVHEGGYSEAYVPFCGHATIAALAD 329
Query: 346 LPLALLSDPIAYYPEDEAFPVK 367
SD IA P E + ++
Sbjct: 330 ------SDTIAPDPHAENYRIR 345
>gi|86139585|ref|ZP_01058153.1| histone deacetylase/AcuC/AphA family protein [Roseobacter sp.
MED193]
gi|85823768|gb|EAQ43975.1| histone deacetylase/AcuC/AphA family protein [Roseobacter sp.
MED193]
Length = 366
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 177/337 (52%), Gaps = 18/337 (5%)
Query: 28 HDTGKGLFDTGFDPGFLEVL-EKH---PENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
HD G + F P L+V ++H PE RI+N++ + G + I PA+I
Sbjct: 14 HDAGNV---SSFVPAGLDVQPDRHAEEPETKRRIRNLLDV--SGLLDQLILIKPE-PAEI 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
Q+ H YI+ + EA K+GG V T + + A ++ G +++ M VL+G K
Sbjct: 68 SQIARVHPDSYISGIEEASKSGGAEVGLNTFIGNEGFDIARVSTGGSIAIMDGVLNGQMK 127
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGF 202
YALVRPPGHHA+PT A G+C NA +A+ ++ +V ++D D H+GNG E F
Sbjct: 128 NGYALVRPPGHHARPTEAMGFCIFANASIAIREMQEKYQLDRVAIVDWDAHHGNGAEEIF 187
Query: 203 YRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
Y VLTISLH ++ P +G + +GEG G G N+N+PLP G+G Y A
Sbjct: 188 YEDPSVLTISLHQDN-----LFPLDSGAMSSIGEGRGEGNNINVPLPPGSGRGAYQAAFD 242
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
+V+PA+Q ++P +IV+ G D+ DP R L Y + + + AD GR+ +
Sbjct: 243 RVVIPALQAYKPQLIVVCSGFDACGLDPLARLMLHSSVYANLTKQLMECADDLCQGRIAM 302
Query: 322 VQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYY 358
+ EGGY + YC A +E + + ++DP Y
Sbjct: 303 LHEGGYSRALAPYCGLAVMETLSGIKTN-ITDPFDEY 338
>gi|148557245|ref|YP_001264827.1| histone deacetylase superfamily protein [Sphingomonas wittichii
RW1]
gi|148502435|gb|ABQ70689.1| histone deacetylase superfamily [Sphingomonas wittichii RW1]
Length = 373
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 153/277 (55%), Gaps = 5/277 (1%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCD 111
+ D + ++S+++ + +++ S P +L HT DYI+ AGG +
Sbjct: 39 DTPDSKRRLLSLVQASGLIDHLAVASADPVSREDMLRVHTVDYIDRFKATSDAGGGDLGG 98
Query: 112 GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAG 171
+ G + A L+ G A+ VL G + AYAL RP GHH P + G+C L N
Sbjct: 99 FAPFSQGGYEIAALSAGLAKRAVDDVLSGRHRNAYALCRPAGHHCLPDGSMGFCLLCNIP 158
Query: 172 LAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTV 230
+A++ A G +V V+D DVH+GNGT +Y + LTISLH + + P +
Sbjct: 159 IAIEAARARHGALRVAVVDWDVHHGNGTQAVYYGRDDTLTISLHQEN-CFPPGYSGE--- 214
Query: 231 DELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPN 290
++ GEG G G NLNIPLP G GD Y HA+ LV+PAI++F P++IV+ G D+ A DP
Sbjct: 215 EDRGEGRGAGCNLNIPLPPGAGDEAYRHALRALVIPAIERFRPDLIVVASGLDAGAADPL 274
Query: 291 GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
R + + +R M + +LADR GG+L++V EGGY
Sbjct: 275 ARMLVHSETFRAMTGELMALADRLCGGKLVVVHEGGY 311
>gi|71483089|gb|AAZ32522.1| deacetylase [uncultured euryarchaeote Alv-FOS4]
Length = 347
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 145/277 (52%), Gaps = 8/277 (2%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE +RI+N+ LK + PA + +L+ HT Y+ L G +
Sbjct: 20 PEKPERIENVYKYLKMKLSDQVDFFDIREPANMEDILAVHTEPYLEFLERMSMRGPTFLG 79
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D T LN S+ AAL+A ++ A +V++ AYALVRPPGHHA M GYC LNNA
Sbjct: 80 DSTYLNKYSYLAALMAAEASIIASDYVVNMDYDFAYALVRPPGHHATEDMYGGYCLLNNA 139
Query: 171 GLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTV 230
+ + G +V +ID D H NGT + FY + VL ISLH + + +P G +
Sbjct: 140 AITARHVQERGLRRVAIIDWDAHAANGTMKIFYSTRDVLLISLHRDPRDF---YPHEGFI 196
Query: 231 DELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPN 290
++G GEG GY +NIPLP G GD Y+ E++ P I+ F P I+ +G D+ D N
Sbjct: 197 HQIGRGEGTGYTVNIPLPAGAGDVEYLRIFEEIIRPIIRSFSPQFIIGDIGFDAHYSDKN 256
Query: 291 GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
LT GY E+ R ++S G ++VQEGGY
Sbjct: 257 IGLALTSRGYVEIIRSIKSY-----GRMFMLVQEGGY 288
>gi|448457209|ref|ZP_21595704.1| histone deacetylase superfamily protein [Halorubrum lipolyticum DSM
21995]
gi|445810790|gb|EMA60805.1| histone deacetylase superfamily protein [Halorubrum lipolyticum DSM
21995]
Length = 334
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 157/305 (51%), Gaps = 28/305 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTG E+HPEN DR++ I L + Y+ PA +
Sbjct: 10 LEHDTG----------------ERHPENPDRLRAIRRGLAKRHGVEYVE---ADPATREE 50
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--K 143
+++ H +Y++EL GG TV + G+W AAL + G + A + LDG
Sbjct: 51 VVAVHDAEYVDELEAFVADGGGSWDPDTVASDGTWDAALASAGLSQWAARSALDGADGRD 110
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGF 202
+AL RPPGHHA P A G+CF NNA +A Q L+ G +V + D DVH+GNGT + F
Sbjct: 111 TPFALGRPPGHHAVPDDAMGFCFFNNAAVAAQTVLDDGAADRVAIFDWDVHHGNGTQDVF 170
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTE 262
Y V S+H +P G +DE G EG G +N+PL G GD Y++A+ E
Sbjct: 171 YERGDVFYASIHEE-----GLYPDTGALDETGRDEGEGTTVNLPLSAGAGDADYLYAIDE 225
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
V PA+++F+P+++++ G D+ DP R ++ +GY M +RS+ D G V
Sbjct: 226 AVAPALERFDPDLVIVSAGFDAHRHDPISRMRVSSEGYALMTDQIRSVTDDI-GAATAYV 284
Query: 323 QEGGY 327
EGGY
Sbjct: 285 LEGGY 289
>gi|390565991|ref|ZP_10246535.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390170759|emb|CCF85878.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 318
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 159/296 (53%), Gaps = 6/296 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPEN+ R+ + L + PA + H P YI + +GG +
Sbjct: 20 QHPENAGRLTAVHQHLAESGMLDERPVLEPTPATAGDIALVHEPRYIAMVERIANSGGGL 79
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ TV++P S+ ALLAVG+ + ++ VL + A+AL RPPGHHA G+C N
Sbjct: 80 LDTDTVVSPRSYDIALLAVGSAIRSVDLVLGQDARRAFALPRPPGHHALQNRGMGFCLFN 139
Query: 169 NAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A Q A+ G +V +ID DVH+GNGT FY +++V S+H W P P
Sbjct: 140 NIAIAAQHAIERKGLRRVAIIDWDVHHGNGTQAIFYETDRVFYASVH----QW-PLFPGT 194
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G+ +E G G G GY LN+ LP G+ D Y+ + E++ P + ++P++I++ G D+
Sbjct: 195 GSAEETGSGPGSGYTLNVALPPGSDDARYLWVLDEIIGPRVAAYQPDLILVSAGFDAHRE 254
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
DP +T DGY + +R+ AD S GRL+++ EGGY+ A + AT+ G+
Sbjct: 255 DPLANMMVTEDGYFSIAARMRAWADSLSDGRLVLILEGGYNQRALALSVEATIRGL 310
>gi|400974351|ref|ZP_10801582.1| acetylpolyamine aminohydrolase [Salinibacterium sp. PAMC 21357]
Length = 380
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 164/296 (55%), Gaps = 12/296 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HP+ R+ +V + + ++ +PA + H YI+ ++A+ A K
Sbjct: 44 HPDTKRRLHELVMSSR---LIDHLVQIDAVPATRADVARVHDTAYIDR-IDAEGALPKGG 99
Query: 110 CDGTVLNPGSWGA---ALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
G ++P G A LA G + A K VLDG AYAL+ PPGHHA+ + G+C
Sbjct: 100 DAGDGVSPFGQGGEQLAYLAAGGAIEATKAVLDGTVDRAYALINPPGHHAERAVGRGFCI 159
Query: 167 LNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
NN +A AL+ +G +V ++D DVH+GNG + F S++VL ISLH N S
Sbjct: 160 FNNTAVAAAYALDVAGLDRVAIVDWDVHHGNGAQDIFAESSQVLNISLHQNRCFPADS-- 217
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G ++E G GEG G++LNIPLP G G+ Y +A+ +V+PA++ F P +I++ G D+
Sbjct: 218 --GFIEENGFGEGAGHSLNIPLPPGGGNAVYEYALESVVIPALEVFRPQLILVPCGFDAG 275
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R + DG+R M R++ A+R GG+++ +QEGGY Y +C AT+E
Sbjct: 276 IMDPLSRMMVRADGFRRMTRLIVDAAERICGGKVVFLQEGGYSPYYVPFCGLATIE 331
>gi|126664446|ref|ZP_01735430.1| histone deacetylase family protein [Marinobacter sp. ELB17]
gi|126630772|gb|EBA01386.1| histone deacetylase family protein [Marinobacter sp. ELB17]
Length = 367
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 186/341 (54%), Gaps = 29/341 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLE-----VLE------KHPENSDRIKNIVSILK 65
+NVF+D+ ML H+ D F P +E +L+ +PE+ R+ I + L
Sbjct: 7 VNVFYDEIMLGHNPE---VDLPFIPSRVEKRVRTILQGLNFKWSYPEHPGRLAAIKAHLD 63
Query: 66 RGPISPYISWHSGIPAQI-PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAAL 124
+ PI P + + SG PA QL H Y++ L D + D T ++P S AA
Sbjct: 64 KNPI-PGVQFQSGAPAATYDQLARVHITSYLDHLFSLDGKRVWLDRDTTAVSPDSIKAAT 122
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCG 183
A G ++A++ V G + A+ALVRPPGHHA+P A G+C LNN +A A GC
Sbjct: 123 AAAGNAIAAVESVCKGEAQSAFALVRPPGHHAEPVRARGFCLLNNVAVAAAHAQAKLGCE 182
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNL 243
+V++ID D H+GNGT + F+ VL H P +P +G ++E+G G G GY +
Sbjct: 183 RVLIIDWDAHHGNGTQDIFWADPDVLFFDTHCA----APFYPGSGLIEEVGVGLGEGYTI 238
Query: 244 NIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGY 300
N+PLP GD + +++VPA + F+P+++++ S+ FDP+ LT DG+
Sbjct: 239 NVPLPETAGDIAFEKVFRDILVPAAEHFKPDLVLV-----SAGFDPHRNDMAMNLTYDGF 293
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+ + RIV+ +AD + G+L V EGGY+++ A +HA LE
Sbjct: 294 KVLTRIVQDIADTHCEGKLAFVLEGGYNLSSLAKGVHAVLE 334
>gi|254281832|ref|ZP_04956800.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
gi|219678035|gb|EED34384.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
Length = 370
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 164/299 (54%), Gaps = 5/299 (1%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+H EN D + + ++L +S + A L HT ++ ++ ++ G +
Sbjct: 36 RHVENPDAKRRVKNLLDASGLSAQLKSIVPRKASFEDLTRAHTSKHVTDVKVKNEQGARD 95
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ L GS+ A L+ G L+A+ + G K AYALVRPPGHHA+ ++ G+C N
Sbjct: 96 AGNLAPLGQGSYEIACLSAGGLLTALDAIKSGDIKNAYALVRPPGHHAEADLSMGFCIFN 155
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A + G K+ +ID DVH+GNGT F+ VLT+SLH + P +
Sbjct: 156 NGAVAARYAQSVLGYKKIAIIDWDVHHGNGTQAIFWDDPSVLTVSLHQDRCF----PPDS 211
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G + + G G G G+NLN+PLP G+G Y+ A+ + +PAI++F+P++I + G D+ AF
Sbjct: 212 GYIQDNGGGAGAGFNLNVPLPPGSGRGAYLSALERVALPAIERFKPDLIFVACGYDAGAF 271
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP RQ L+ D + EM +V+ A R GR+L+ EGGYH Y +E + ++
Sbjct: 272 DPMARQMLSSDTFGEMTALVKGTASRLCEGRMLLYHEGGYHAETVPYFALRVIEELADI 330
>gi|161524514|ref|YP_001579526.1| histone deacetylase superfamily protein [Burkholderia multivorans
ATCC 17616]
gi|189350730|ref|YP_001946358.1| acetoin utilization protein [Burkholderia multivorans ATCC 17616]
gi|160341943|gb|ABX15029.1| histone deacetylase superfamily [Burkholderia multivorans ATCC
17616]
gi|189334752|dbj|BAG43822.1| acetoin utilization protein [Burkholderia multivorans ATCC 17616]
Length = 373
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 161/307 (52%), Gaps = 6/307 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAQLDMRGAAPAARDDLLRIHPAGYLDAFRALSDANGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIAAVDAVVAERAANAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G G+V VID DVH+GNGT +Y LTISLH + P G
Sbjct: 158 IPIAIEAARAKHGIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYG 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
++ G G G G NLN+PL G+GD Y HA +V+PA+++F P +IV+ G D+SA D
Sbjct: 214 GAEDRGAGAGVGANLNVPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + +
Sbjct: 274 PLARMQLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGVRT 333
Query: 349 ALLSDPI 355
A ++DP+
Sbjct: 334 A-VADPM 339
>gi|355572754|ref|ZP_09043820.1| histone deacetylase superfamily [Methanolinea tarda NOBI-1]
gi|354824298|gb|EHF08551.1| histone deacetylase superfamily [Methanolinea tarda NOBI-1]
Length = 359
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 167/327 (51%), Gaps = 17/327 (5%)
Query: 39 FDPGFL--EVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDY 94
FD FL E HPE +R+ + ++ + P I A Q+ H P+Y
Sbjct: 7 FDREFLLHEQSPSHPERRERLSYTIDQIEEEGLFHHPRIRVSRPPRATREQVERVHHPEY 66
Query: 95 INELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
+ L EA + GG + D TV+ G ALLA G L A V G A+ALVRPPGH
Sbjct: 67 VRFLEEASRRGGFIDFD-TVVPRGLLDCALLAAGGALHAGISVWKGDFTNAFALVRPPGH 125
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA+ G+C+LNN + V+ + G KV+V+D D H+G+GT FY VL S+H
Sbjct: 126 HARAGTGAGFCYLNNMAIMVRHLQHEGVRKVLVLDWDAHHGDGTQSIFYADPSVLFTSIH 185
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
P +P +G +DE+GEG G GY +N+P+P GTGD Y + ++ P ++F P+
Sbjct: 186 QK-----PLYPGSGDIDEMGEGPGLGYTVNMPVPPGTGDVSYHYLFDTVIAPLAREFSPD 240
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT---- 330
+I + GQD DP ++ GY E+ R LAD G+L+ V EGGY V
Sbjct: 241 IIAISAGQDVHFTDPLTGLAVSARGYAELVRKAVMLADSICNGKLVAVLEGGYSVEGGLP 300
Query: 331 YSAYCLHATLEGVLNLPLALLSDPIAY 357
Y+ + A L G LPL + +P Y
Sbjct: 301 YTNLGIIAALAG---LPLESIREPAGY 324
>gi|448466838|ref|ZP_21599260.1| histone deacetylase superfamily protein [Halorubrum kocurii JCM
14978]
gi|445813264|gb|EMA63244.1| histone deacetylase superfamily protein [Halorubrum kocurii JCM
14978]
Length = 334
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 171/336 (50%), Gaps = 35/336 (10%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGIPAQIP 84
L HDTG E+HPEN DR++ I +RG + + + PA
Sbjct: 10 LEHDTG----------------ERHPENPDRLRAI----RRGLAKRHGVEYAEADPATRE 49
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG-- 142
++++ H +Y++EL GG TV + G+W AAL + G + A + LDG
Sbjct: 50 EVVAVHDAEYVDELESFVADGGGSWDPDTVASEGTWNAALASAGLSQWAARSALDGADGR 109
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEG 201
+AL RPPGHHA P A G+CF NNA +A Q L+ G +V + D DVH+GNGT +
Sbjct: 110 DTPFALGRPPGHHAVPDDAMGFCFFNNASVAAQTVLDDGAADRVAIFDWDVHHGNGTQDV 169
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY + VL S+H +P G +DE G EG +N+PL G GD Y++A+
Sbjct: 170 FYDRDDVLYASIHEE-----GLYPDTGALDETGRDEGEETTVNLPLAAGAGDADYLYAID 224
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E + PA+++F+P+++++ G D+ DP R ++ +GY M +RS+ D G
Sbjct: 225 EAIAPALERFDPDLLIVSAGFDAHRHDPISRMRVSSEGYALMTDQLRSVTDDI-GAATAY 283
Query: 322 VQEGGYHVTYSA---YCLHATLEGVLNLPLALLSDP 354
V EGGY + A +H T +G P+ DP
Sbjct: 284 VLEGGYGLDTLAEGVSMVHETFDG--RTPVDSDEDP 317
>gi|309792427|ref|ZP_07686893.1| histone deacetylase superfamily [Oscillochloris trichoides DG-6]
gi|308225537|gb|EFO79299.1| histone deacetylase superfamily [Oscillochloris trichoides DG6]
Length = 349
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 158/299 (52%), Gaps = 11/299 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ--LLSFHTPDYINELVEADKAGGK 107
HPE +DR+ I+ L ++ + S P + P+ LL+ HTPD + + GG
Sbjct: 23 HPECADRLDAIMEALATSGLTDDL--RSVAPNEAPEKALLAVHTPDLLWRIRHLSSFGGG 80
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ T L SW AAL A G + A+ L H A+ALVRPPGHHA P A G+C +
Sbjct: 81 QIDGDTYLTYDSWDAALYAAGAAMGAVDVALARHPNNAFALVRPPGHHATPNRAMGFCLI 140
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A + ALN G +V ++D DVH+GNGT + FY +VL IS H P +P
Sbjct: 141 NNVAVAARHALNRYGLRRVAIVDYDVHHGNGTQDAFYDEPRVLFISTHA-----APFYPG 195
Query: 227 NGTVDELGE-GEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + E+G G G LNIPLP G GD GY ELVVPA+++F P ++++ G DS
Sbjct: 196 TGAMAEVGTPGPAAGTTLNIPLPFGVGDAGYAQVFDELVVPALRRFHPELLLVSAGYDSH 255
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
DP G L+ GY + + LA GR+ + EGGY + C AT+ +L
Sbjct: 256 WKDPLGPMTLSTSGYAHLTARLLDLAQELCQGRIAFILEGGYSLEALGACTIATMRLLL 314
>gi|89069051|ref|ZP_01156432.1| deacetylase / probable acetylpolyamine aminohydrolase [Oceanicola
granulosus HTCC2516]
gi|89045420|gb|EAR51485.1| deacetylase / probable acetylpolyamine aminohydrolase [Oceanicola
granulosus HTCC2516]
Length = 368
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 149/297 (50%), Gaps = 10/297 (3%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L ++PE R+KN+ + +S + + PA L H Y+ +AGG
Sbjct: 37 LPENPEGKRRLKNLADVTG---LSRDLVQATAPPATWDALARVHDTGYLERFRAMAEAGG 93
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ + A L+ G A++ VL G AYAL RPPGHH +G+C
Sbjct: 94 GEIGLRAPFGVDGFEIAALSAGLATGALRAVLTGEHANAYALSRPPGHHCTRDFPNGFCL 153
Query: 167 LNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
+NN +A++ A G + V+D DVH+GNGT +Y LT+SLH ++P
Sbjct: 154 VNNIAVALETARAEGRLTRAAVLDWDVHHGNGTEAIYYDDPDTLTVSLHQER-----NYP 208
Query: 226 -QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
G ++ G G G G NLNIPLP G G ++ A+ L +PAI+ F P +IV+ G D+
Sbjct: 209 LDTGGFEDRGTGAGAGANLNIPLPPGAGHVTWLAALERLALPAIRAFRPEVIVVACGYDA 268
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+ DP R T D YR M R R+LA GRLL+V EGGY Y +C HA LE
Sbjct: 269 ALIDPLSRMMCTADTYRRMTRATRTLAGEVCDGRLLMVHEGGYSEVYVPFCGHAVLE 325
>gi|399546796|ref|YP_006560104.1| histone deacetylase family protein [Marinobacter sp. BSs20148]
gi|399162128|gb|AFP32691.1| histone deacetylase family protein [Marinobacter sp. BSs20148]
Length = 367
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 187/341 (54%), Gaps = 29/341 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLE-----VLE------KHPENSDRIKNIVSILK 65
++VF+D+ ML H+ D F P +E +L+ +PE+ R+ I + L
Sbjct: 7 VHVFYDEIMLGHNPE---VDLPFIPSRVEKRVRAILQGLNFKWSYPEHPGRLAAIKAHLD 63
Query: 66 RGPISPYISWHSGIPAQI-PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAAL 124
+ PI P + + SG PA QL H Y++ L D + D T ++P S AA
Sbjct: 64 KHPI-PGVQFQSGAPAATYDQLARVHITSYLDHLFSLDGKRAWLDRDTTAVSPDSIKAAT 122
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCG 183
A G ++A++ V G + A+ALVRPPGHHA+P A G+C LNN +A A GC
Sbjct: 123 AAAGNAIAAVESVCKGEAQSAFALVRPPGHHAEPVRARGFCLLNNVAVAAAHAQAKLGCE 182
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNL 243
+V++ID D H+GNGT + F+ VL H P +P +G ++E+G G G GY +
Sbjct: 183 RVLIIDWDAHHGNGTQDIFWADPDVLFFDTHCA----APFYPGSGLIEEVGVGLGEGYTI 238
Query: 244 NIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGY 300
N+PLP GD + A ++++PA + F+P+++++ S+ FDP+ LT DG+
Sbjct: 239 NVPLPETAGDIAFEKAFRDILMPAAEHFKPDLVLV-----SAGFDPHRNDMAMNLTYDGF 293
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+ + RIV+ +AD + G+L V EGGY+++ A +HA LE
Sbjct: 294 KVLTRIVQDIADTHCEGKLAFVLEGGYNLSSLAKGVHAVLE 334
>gi|406898250|gb|EKD41915.1| histone deacetylase family protein [uncultured bacterium]
Length = 315
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 165/335 (49%), Gaps = 25/335 (7%)
Query: 10 SPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPI 69
+P E + WD+ L HDTG LF HPE +R+ I ILK
Sbjct: 5 NPTTEKKTGLVWDERYLLHDTG--LF--------------HPERPERLNAIKQILKD--- 45
Query: 70 SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGT 129
W + A I ++ HT D+I+E+++ D T P S AA LA G
Sbjct: 46 DRSYEWITPRIASIDEIAWVHTKDHIDEVLKCDGISQHFFDGDTPAGPHSTEAAFLAAGG 105
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVI 188
+ A++ V +G K A+ RPPGHHA+ A G+C NN +A Q + K +V++
Sbjct: 106 LMKAVQEVEEGKIKNAFVFPRPPGHHAESDHAMGFCIFNNVAIAAQYLIKQKNKKRIVIM 165
Query: 189 DIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP 248
D DVH+GNGT FY + V +S H P +P G+ DE G GEG G LN+PL
Sbjct: 166 DFDVHHGNGTQHFFYERSDVFYLSTHRF-----PFYPGTGSGDETGVGEGMGTTLNVPLD 220
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
D Y + ++PAI ++P+ I++ G D+ DP G +T +G+ M + +
Sbjct: 221 AYADDEDYRASFENQIIPAIDHYKPDFILVSAGYDAHIRDPLGGMKVTKEGFFMMSQSLS 280
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
LA ++ GG+++ V EGGY + + ATLE +
Sbjct: 281 ELAKKHCGGKIVYVLEGGYDLKGLQEGVSATLESL 315
>gi|156742869|ref|YP_001432998.1| histone deacetylase superfamily protein [Roseiflexus castenholzii
DSM 13941]
gi|156234197|gb|ABU58980.1| histone deacetylase superfamily [Roseiflexus castenholzii DSM
13941]
Length = 345
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 178/338 (52%), Gaps = 11/338 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+H E + R+ I + L + + PA QLL+ H+P I + +
Sbjct: 18 RHVEQAARLHAITAALNASGLRASLLEIPARPATEDQLLAVHSPSMIELVRWSANRPHSW 77
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T SW AAL+A GT ++ ++ V+ G + +ALVRPPGHHA PT + G+C N
Sbjct: 78 IDHDTYTTSASWDAALMAAGTAVAVVEAVVGGSARNGFALVRPPGHHATPTESMGFCLFN 137
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A++ G+V ++D DVH+GNGT + FY ++V S H + P +P
Sbjct: 138 NVAVAARYAIDHLSIGRVAIVDFDVHHGNGTQDIFYTDDRVFFCSTHAS-----PLYPGT 192
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G ++G G+G G LN+PLP+G GD G+ ++V+PAI+++ P++I++ G D
Sbjct: 193 GAERDIGSGKGHGTTLNLPLPHGVGDAGFARLFDDVVIPAIRRYRPDLILVSAGYDGHWA 252
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP G L++ GY + R + A+ GR+++V EGGYH+ A A LE VL
Sbjct: 253 DPLGPLTLSVAGYAALTRRLMEAAEEVCRGRMVLVLEGGYHLRALAASAMACLE-VLTNK 311
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKG 385
+++ DP+ E E +I ++Q P L G
Sbjct: 312 NSIVVDPLGPAGESEPDVSALIARMRQNH----PLLAG 345
>gi|119505724|ref|ZP_01627793.1| histone deacetylase/AcuC/AphA family protein [marine gamma
proteobacterium HTCC2080]
gi|119458434|gb|EAW39540.1| histone deacetylase/AcuC/AphA family protein [marine gamma
proteobacterium HTCC2080]
Length = 370
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 158/285 (55%), Gaps = 18/285 (6%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGG 106
++PE R +N++ + + I S A+I L FHTP+++ + + AD G
Sbjct: 40 ENPETKRRFRNLLEVAGMDDVLTAIKPRSATEAEI---LRFHTPEHLTNVQRISADTGG- 95
Query: 107 KMVCDGTVLNP---GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D P GS+ A+L+ G LSA++ ++ AYALVRPPGHHA G
Sbjct: 96 ----DAGFFTPAGRGSYEIAMLSAGGVLSALEALMADEIDNAYALVRPPGHHAIAGEGMG 151
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C NA +A AL + G ++ +D DVH+GNGT FY + LTIS+H ++
Sbjct: 152 FCIFGNATIAGFHALETLGVNRIAYVDWDVHHGNGTQSAFYDDARALTISVHQDNCF--- 208
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
P +G V E+GEG G GYN+NIPLP G+G Y +LV+PA+ + P +I++ G
Sbjct: 209 -PPDSGHVHEVGEGAGEGYNINIPLPPGSGVGAYEAVFDQLVIPALDAYGPELIIVPSGF 267
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ A+DP GR + +GYR + + S ADR+ G++L+ EGGY
Sbjct: 268 DAGAYDPLGRMQMHSEGYRSLTEKLLSAADRHCQGKILMTHEGGY 312
>gi|424775508|ref|ZP_18202501.1| histone deacetylase superfamily protein [Alcaligenes sp. HPC1271]
gi|422889218|gb|EKU31598.1| histone deacetylase superfamily protein [Alcaligenes sp. HPC1271]
Length = 369
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 164/313 (52%), Gaps = 14/313 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGGK 107
HP+ R +V G I S + PA+ +L HT +++ + V A GG
Sbjct: 39 HPDTKRRFHELVC--ASGQIDHLTSIQAK-PARDKDILRVHTAEHLENMKRVSALPTGGD 95
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T + G A+L+ G + +K V+ YALV PPGHHA A G+C
Sbjct: 96 TGDGITTMGNGGLEIAMLSAGGAIEMVKKVVSREVSNGYALVNPPGHHAPRAGAMGFCIF 155
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A A G +V ++D DVH+GNGT + ++ VLTISLH + P
Sbjct: 156 NNTSVAAAYAREELGLDRVAILDWDVHHGNGTQDIWWNDPSVLTISLHQH-----LCFPA 210
Query: 227 N-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
N G E GEGEG GYNLNIPLP G G+ Y++AM ++V+PA++ ++P +I++ G D+S
Sbjct: 211 NSGFTTERGEGEGLGYNLNIPLPPGGGNAAYLYAMEKVVLPALRAYKPQLIIVGSGFDAS 270
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
DP R +T G+R+M R + A+ GR+ VQEGGY Y +C A +E +
Sbjct: 271 MMDPLARMMVTASGFRQMARQIIDCAEEVCEGRIAFVQEGGYSPHYLPFCGQAVIEELTG 330
Query: 346 LPLALLSDPIAYY 358
+ L+DP A +
Sbjct: 331 --VRTLADPYADF 341
>gi|448494505|ref|ZP_21609492.1| histone deacetylase superfamily protein [Halorubrum californiensis
DSM 19288]
gi|445689340|gb|ELZ41580.1| histone deacetylase superfamily protein [Halorubrum californiensis
DSM 19288]
Length = 334
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 162/311 (52%), Gaps = 30/311 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGI 79
+ D L+HDTG E+HPEN DR++ I +RG + + +
Sbjct: 5 YSDRCLDHDTG----------------ERHPENPDRLRAI----RRGLTKRHGVEYVEAD 44
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA+ + + H +Y++EL GG TV + G+W AAL A G A + LD
Sbjct: 45 PAEKAAITAVHDDEYVDELESFVADGGGSWDPDTVASDGTWDAALTAAGLAQWAAREALD 104
Query: 140 GHG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGN 196
G + +A+ RPPGHHA A G+CF NNA +A Q A++ G +V + D DVH+GN
Sbjct: 105 GATGRQTPFAIGRPPGHHAVTDDAMGFCFFNNAAVAAQTAIDEGLADRVAIFDWDVHHGN 164
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY S V S+H + +P G +DE GEG+G G N+PL G GD Y
Sbjct: 165 GTQDIFYDSEDVFYASIHED-----GLYPDTGALDETGEGDGEGTTANLPLAAGAGDADY 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
++A+ E + PA+ +F+P++ ++ G D+ DP R ++ +GY + +R+LA G
Sbjct: 220 LYAVDEGITPAVDRFDPDLFIVSAGFDAHRHDPISRMRVSSEGYALLTDRIRTLAADV-G 278
Query: 317 GRLLIVQEGGY 327
V EGGY
Sbjct: 279 AADAYVLEGGY 289
>gi|374629880|ref|ZP_09702265.1| histone deacetylase superfamily [Methanoplanus limicola DSM 2279]
gi|373907993|gb|EHQ36097.1| histone deacetylase superfamily [Methanoplanus limicola DSM 2279]
Length = 358
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 180/352 (51%), Gaps = 19/352 (5%)
Query: 39 FDPGFL--EVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDY 94
+ P +L E H E +RI + +L + I + A ++L+ HT DY
Sbjct: 7 YHPDYLLHEQTPTHAERRERIAYTIDMLDEEEVWDDSRILRVNPRMATDEEVLAVHTGDY 66
Query: 95 INELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
+ L EAD +G + + T PG LL+ G ++A + V+ G + A+AL+RPPGH
Sbjct: 67 LRRLKEADISGAEF-DENTYAPPGFLNNTLLSAGGAVTAGEAVMSGEVRNAFALIRPPGH 125
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA A G+C+LNN + + N G ++++ID D H+GNGT + FY VL IS+H
Sbjct: 126 HAGRDFAGGFCYLNNVAVMTRSLQNLGVKRLMIIDWDAHHGNGTQDIFYDDPDVLYISIH 185
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
H P G + ++GEG+ G +N+P+ G+ R Y + M E++VPA ++F+P
Sbjct: 186 QEH-----CFPGTGRIKDIGEGDARGRTINMPVAPGSSGRVYRYLMKEIIVPAAEEFKPG 240
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA- 333
I + GQD+ D R L GY ++ LA++ GGR+ V EGGY V +
Sbjct: 241 FIAVSAGQDNHFTDQQTRLALDTKGYADLMSEAVYLAEKLCGGRIAAVLEGGYSVEGALP 300
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYP------EDEAFPV--KVIESIKQYQN 377
Y A + + L+++ +P Y P D AF V K+ + +K+ Q+
Sbjct: 301 YVNLAIIAALAGFDLSMMREPALYDPLYRDSFNDIAFKVSEKMAKKVKKVQS 352
>gi|339505077|ref|YP_004692497.1| histone deacetylase-like amidohydrolase HdaH [Roseobacter litoralis
Och 149]
gi|338759070|gb|AEI95534.1| histone deacetylase-like amidohydrolase HdaH [Roseobacter litoralis
Och 149]
Length = 366
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 166/311 (53%), Gaps = 9/311 (2%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L + E R+KN++ + +S + A LL H Y++E AGG
Sbjct: 37 LPETQEAKRRLKNLMDVTG---LSDDLDVRRAPLATREDLLRVHPASYLDEFKRMSDAGG 93
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T G + A L+ G ++A+ V+ G + AYAL RPPGHH P +G+C
Sbjct: 94 GELGRRTPFAAGGYEIASLSAGLVVAAVDAVVRGDLENAYALSRPPGHHCLPDYPNGFCL 153
Query: 167 LNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A G K VVV+D DVH+GNGT +Y VLTISLH G
Sbjct: 154 LANIAIAIEAAQAKGFAKRVVVLDWDVHHGNGTEAIYYDRPDVLTISLHQE----GNYPL 209
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + + G+G+G GYNLN+PL GTG GY+H M +V+P I F+P++IV+ G D+S
Sbjct: 210 DTGGIADRGKGDGSGYNLNVPLIAGTGHTGYLHVMDTIVLPQIAVFKPDLIVVACGYDAS 269
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
A DP R T D +R+M +++ A + GRL++ EGGY Y +C HATLE L+
Sbjct: 270 AIDPLARMLATADTFRKMTERIKAAAQEHCDGRLVLAHEGGYSEVYVPFCGHATLE-ALS 328
Query: 346 LPLALLSDPIA 356
DP+A
Sbjct: 329 ASDKTAPDPLA 339
>gi|308273423|emb|CBX30025.1| hypothetical protein N47_D28340 [uncultured Desulfobacterium sp.]
Length = 360
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 163/308 (52%), Gaps = 12/308 (3%)
Query: 40 DPGFLE--VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINE 97
DP +LE + HPE+ R++ I S+L+ ++ A +L HT +YI+
Sbjct: 18 DPLYLEHTADDYHPESPHRLETIYSMLEEKDMAGKFVAIKPREATREELGYIHTAEYISR 77
Query: 98 LVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
+ M+ T +PGSW AA+LA G L + ++++ +A +RPPGHHA+
Sbjct: 78 VASTKTRSKVMLDPDTYTSPGSWEAAILAAGGVLELIDNLMEKKIDNGFAFLRPPGHHAE 137
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+C NN + + A+ ++++ID D+H+GNGT FY +VL S H
Sbjct: 138 ADRAMGFCLFNNIAIGAKYAIEKYNLDRILIIDWDIHHGNGTQRSFYNDPQVLYFSTHQY 197
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
P +P G V+ELGEG+G G+ +NIPL +G GD Y E++ P +F+P +I
Sbjct: 198 -----PYYPGTGGVNELGEGKGKGFTINIPLSSGVGDDEYAGIFMEILKPVAFEFKPQLI 252
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D DP G +T +G+ + +I+ LAD G++L + EGG YS L
Sbjct: 253 LVSAGFDIYIDDPLGGMEITPEGFARLAKIILELADTICEGKVLFILEGG----YSLKGL 308
Query: 337 HATLEGVL 344
H +++ VL
Sbjct: 309 HDSVKAVL 316
>gi|377572481|ref|ZP_09801566.1| putative deacetylase [Gordonia terrae NBRC 100016]
gi|377530253|dbj|GAB46731.1| putative deacetylase [Gordonia terrae NBRC 100016]
Length = 372
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 157/295 (53%), Gaps = 10/295 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV-EADKAGGKM 108
HP+ R+ ++S G I+ PA +L H + + +V E+ G
Sbjct: 41 HPDTKRRLHELIS--ASGLINSLRQLEPA-PATREDVLRVHDAAHYDRIVTESALPKGGD 97
Query: 109 VCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG G ALLA G + A++ V DG AYAL+ PPGHHA+ G+C
Sbjct: 98 AGDGVSPFGNGGHHIALLAAGGAIEAVRAVADGTVSNAYALINPPGHHAERATGRGFCIF 157
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A AL+ G +V ++D DVH+GNG + F S+ VL IS+H + PS
Sbjct: 158 NNGAIAAAHALDVLGMTRVAIVDWDVHHGNGAQDIFRESSNVLNISVHQDR--CFPS--D 213
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G DE G G+GFGY LN+PLP G G Y +A +V+PA++ + P +I++ G D+S
Sbjct: 214 SGFRDERGSGDGFGYTLNVPLPPGGGSGAYEYAFDAVVLPALRAYRPELIIVASGFDASM 273
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP R L DG+R + R + +AD +GGRL+ +QEGGY Y +C A +E
Sbjct: 274 MDPLARMMLRADGFRSLARKIIDVADEVAGGRLVCLQEGGYSPYYVPFCGLAVVE 328
>gi|339000109|ref|ZP_08638731.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
gi|338762984|gb|EGP17994.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
Length = 362
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 183/336 (54%), Gaps = 28/336 (8%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLE-----------VLEKHPENSDRIKNIVSILKRGP 68
F+DD +L+H+ D F P ++ + K+PE+ R++ I +L++ P
Sbjct: 7 FYDDRVLDHEPN---IDADFLPERIDKRIRHLLAGLPIPWKYPEHPGRLQAIQQLLEKAP 63
Query: 69 ISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVG 128
I + G A QL HT Y++++ + D T ++PGS AA +A G
Sbjct: 64 IDG-LQIEGGKAATHDQLARVHTTSYLSDIFSLRGKNAWLDVDTTAVSPGSIDAAEVAAG 122
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
T ++A++ V+D + A+AL+RPPGHHA+P A G+C NN +A A ++ GC +V++
Sbjct: 123 TAIAAVEAVMDKRTQSAFALIRPPGHHAEPVRARGFCLFNNVAVAAAHARSALGCERVLI 182
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
ID D H+GNGT + F+ V+ +H P +P +G ++E+G G G G +N+PL
Sbjct: 183 IDWDAHHGNGTQDIFWADPDVMFFDIHRA----APFYPGSGHLEEVGAGLGEGTTINVPL 238
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGYREMG 304
P G GD Y+ A +++ PA F+P++I++ S+ FDP+ ++ +G+ +
Sbjct: 239 PAGAGDEAYLKAFRDILAPAAHWFKPDIILV-----SAGFDPHWHDLALNVSYEGFGALT 293
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
++ LA+++ GRL+ V EGGY++ A A L
Sbjct: 294 GFLQQLAEQHCEGRLVFVLEGGYNLESLANGTRAVL 329
>gi|349700851|ref|ZP_08902480.1| putative acetylpolyamine aminohydrolase [Gluconacetobacter
europaeus LMG 18494]
Length = 371
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 167/332 (50%), Gaps = 12/332 (3%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE+ D + + S+L + ++ S A LL H Y+ + +AGG ++
Sbjct: 39 PESPDSKRRLKSLLDMSGLLGKLTSLSAPSAGEEALLRIHGSAYLEKFRRVSEAGGGVMG 98
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
GS+ A + G + A+ VL G AYAL RPPGHH P G+CFL N
Sbjct: 99 PEASCGKGSYDYARKSTGLVMRAVDMVLSGDLDNAYALSRPPGHHCLPDEGMGFCFLANI 158
Query: 171 GLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A++ A +V V+D DVH+GNGT FY VLTIS+H N G HP
Sbjct: 159 PVAIEEARRVHKLSRVAVVDWDVHHGNGTEAIFYDRPDVLTISIHQENCYPTGSGHP--- 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D G+G G GYN+NIPL G G YV AM ++VVPA++ ++P +I++ G D++AFD
Sbjct: 216 --DRRGDGAGEGYNINIPLLPGGGHDAYVGAMEKIVVPALKAYQPELIIVACGYDANAFD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L YR + V +A GG+++ EGGY Y +C HA +E +
Sbjct: 274 PLARMMLPSQTYRYLISRVMDVAGEVCGGKVVAAHEGGYSEAYVPFCGHALIETLAGCTT 333
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
A+ + AY + P V +QN+++
Sbjct: 334 AVKDEIEAYILAQQPGPRFV-----AFQNELL 360
>gi|338997205|ref|ZP_08635906.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
gi|338765802|gb|EGP20733.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
Length = 368
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 173/328 (52%), Gaps = 17/328 (5%)
Query: 20 FWDDGMLNHDTGK-GLFDTGFDPG-FLEV--LEKHPENSDRIKNIVSILKRGPISPYISW 75
+W + HD G G+F PG FL+ + PE+ R+KNI+ + G I +
Sbjct: 7 YWHERCFWHDQGAIGVFSA---PGEFLQPQPASESPESKRRLKNILEV--SGLIDE-LRV 60
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
A + LL FHT Y+ L D+A G D PGSW AA + G ++A++
Sbjct: 61 VKPPAASVEDLLRFHTARYLESLQAGDQARGGNGGDCAPFMPGSWAAARHSAGLAVAAVE 120
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
V GH AYAL RPPGHHA+ G+C L N +AV A G +V ++D DVH+
Sbjct: 121 DVALGHVNNAYALCRPPGHHAEADQGRGFCLLGNIPVAVMRARALGQVKRVAILDWDVHH 180
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GN FY +V T+S+H ++P G+ +E GEGEG G NLN+PLP G G
Sbjct: 181 GNSQQSAFYAEPEVFTVSVHQ-----AANYPLDTGSFEEQGEGEGLGANLNLPLPPGCGL 235
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y +AM LV+PA++ F P++IV+ G D+ A DP G+ L + EM +++LA R
Sbjct: 236 GAYRYAMASLVLPALEAFNPDLIVVACGYDACAKDPLGKMLLNSAAFAEMTAQLKALAAR 295
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLE 341
G+L+ V EGGY Y C H ++
Sbjct: 296 CCQGKLVFVHEGGYSEGYVPLCGHGVIQ 323
>gi|108760712|ref|YP_634045.1| histone deacetylase [Myxococcus xanthus DK 1622]
gi|108464592|gb|ABF89777.1| histone deacetylase family protein [Myxococcus xanthus DK 1622]
Length = 347
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 161/302 (53%), Gaps = 12/302 (3%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG + HPE+ R++ I+ +L P+ + + A +L S HTP+ + L
Sbjct: 22 DPG-----QGHPESPSRLRRILGVLASTPVKGTV-MTAPRSATEAELASVHTPELLAYLQ 75
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
+ ++ D T ++P S AA LA G ++ A++ V+ G + +ALVRPPGHHA+P
Sbjct: 76 RINGHRAQIDPD-TQVSPDSVDAARLAAGASVQAVEAVMKGEARNGFALVRPPGHHAEPD 134
Query: 160 MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
A G+C NNA +A + G +V+V+D DVH+GNGT F+ V+ S+H
Sbjct: 135 KAMGFCLYNNAAIAAEAGRKLGAERVLVLDWDVHHGNGTQAAFWSRRDVMYQSVHQF--- 191
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P P G E+G G G GY +N+ LP G D Y EL++P + + P +I++
Sbjct: 192 --PYFPGTGAAPEVGVGAGEGYTINVGLPGGNSDADYGMIFEELLLPVAEAYRPQLILVS 249
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G DS DP G ++ G+ M ++SLAD GRL+++ EGGY + + +HA
Sbjct: 250 AGFDSHQHDPIGGMDVSERGFAAMCSAMKSLADSVCQGRLVLLLEGGYSLEGLSQSVHAC 309
Query: 340 LE 341
+E
Sbjct: 310 VE 311
>gi|116619442|ref|YP_821598.1| histone deacetylase superfamily protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116222604|gb|ABJ81313.1| histone deacetylase superfamily [Candidatus Solibacter usitatus
Ellin6076]
Length = 312
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 155/295 (52%), Gaps = 11/295 (3%)
Query: 40 DPGFLEVL--EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINE 97
DP F E L +HPE R ++ L R + + A +L HTPDY+ +
Sbjct: 8 DPIFREHLAGRRHPECPARFDAVLDGLDRAGLLAKMLRVEARDATQEELTLCHTPDYL-K 66
Query: 98 LVEADKAGGK--MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
+D A G+ + T + P SW A+ A G L+A+ VL G + A+ VRPPGHH
Sbjct: 67 TARSDVASGRPYLSTGDTDITPNSWDVAVRASGGVLNAVDAVLTGAARNAFCAVRPPGHH 126
Query: 156 AQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+C LNN +A + A G +V ++D DVH+GNGT + FYR V S H
Sbjct: 127 ANAARGMGFCLLNNVAIAARYAQRRHGIERVAIVDWDVHHGNGTQDIFYREGSVFFFSTH 186
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
W P +P G DE GEG G G +N P P G+G + A+ + PA+++F P
Sbjct: 187 ----QW-PLYPGTGRADETGEGPGEGTTMNFPFPAGSGRSQILGAVENSLAPALERFRPE 241
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
++++ G DS D GR LT + + ++ V +ADR++GGRL+ + EGGY++
Sbjct: 242 LVLISAGFDSREGDLLGRFTLTDEDFTDLTGAVMGIADRHAGGRLVSMLEGGYNL 296
>gi|359786372|ref|ZP_09289507.1| histone deacetylase superfamily protein [Halomonas sp. GFAJ-1]
gi|359296222|gb|EHK60475.1| histone deacetylase superfamily protein [Halomonas sp. GFAJ-1]
Length = 362
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 182/336 (54%), Gaps = 28/336 (8%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLE-----------VLEKHPENSDRIKNIVSILKRGP 68
F+DD +L H+ D F P ++ + K+PE+ R+K I +L++ P
Sbjct: 7 FYDDRVLAHEPN---IDADFLPERIDKRIRHLLAGLPIPWKYPEHPGRLKAIQLLLEKAP 63
Query: 69 ISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVG 128
I + G A QL HT Y++++ + D T ++PGS AA +A G
Sbjct: 64 IKG-LKIEGGKAATAEQLARVHTTSYLSDIFSLRGKNAWLDVDTTAVSPGSVDAAEVAAG 122
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
T ++A++ V++ + A+AL+RPPGHHA+P A G+C NN +A A ++ GC +V++
Sbjct: 123 TAIAAVEAVMEKRTQSAFALIRPPGHHAEPVRARGFCLFNNVAVAAAHARSALGCERVLI 182
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
ID D H+GNGT + F+ V+ +H P +P +G ++E+G G G G +N+PL
Sbjct: 183 IDWDAHHGNGTQDIFWADPDVMFFDIHRA----APFYPGSGHLEEVGAGLGEGTTINVPL 238
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGYREMG 304
P G GD Y+ A +++ PA F+P++I++ S+ FDP+ ++ +G+ +
Sbjct: 239 PAGAGDEAYLKAFRDILAPAAAWFKPDIILV-----SAGFDPHWHDLALNVSYEGFGALT 293
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
++ LAD++ GRL+ V EGGY++ A A L
Sbjct: 294 GALQQLADQHCEGRLVFVLEGGYNLESLANGTRAVL 329
>gi|124267841|ref|YP_001021845.1| acetylpolyamine aminohydrolase [Methylibium petroleiphilum PM1]
gi|124260616|gb|ABM95610.1| putative acetylpolyamine aminohydrolase [Methylibium petroleiphilum
PM1]
Length = 371
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 162/308 (52%), Gaps = 6/308 (1%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCD 111
E+ + + +VS+++ ++ + S A L H Y+ GG +
Sbjct: 42 ESPESKRRMVSLMQVSGLADKVHLRSAPMATEEDLQRVHPTAYLERFKALSDQGGGEIGL 101
Query: 112 GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAG 171
PGS+ A + G L A+ VL G + AY++ RPPGHH M G+C L N
Sbjct: 102 YAPFGPGSYEIARQSAGLALHAVDAVLSGAHRNAYSMSRPPGHHCLADMPMGFCLLANIP 161
Query: 172 LAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTV 230
+A++ A G ++ V+D DVH+GNGT FY + VLT+SLH G + + +G
Sbjct: 162 IAIEAARARHGVKRIAVLDWDVHHGNGTQSIFYERDDVLTVSLH-QEGCFPVGY--SGAP 218
Query: 231 DELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPN 290
D G+G G GYN+N+PL G G Y++AM +V PAI ++ P ++++ G D++ DP
Sbjct: 219 DR-GQGRGLGYNVNVPLLPGGGHDAYLYAMERIVTPAIDRYRPELLIVASGFDANGVDPL 277
Query: 291 GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLAL 350
R L + YR++ V +LADR+ GGRL++V EGGY +C HA +E + L
Sbjct: 278 ARMLLHSESYRQLTERVMALADRHCGGRLVVVHEGGYSEACVPFCGHAVVETLAGERLG- 336
Query: 351 LSDPIAYY 358
+ DP ++
Sbjct: 337 VEDPFLHF 344
>gi|171320817|ref|ZP_02909822.1| histone deacetylase superfamily [Burkholderia ambifaria MEX-5]
gi|171093939|gb|EDT39055.1| histone deacetylase superfamily [Burkholderia ambifaria MEX-5]
Length = 369
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 155/293 (52%), Gaps = 5/293 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S+++ ++ ++ PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRLLSLVQASGLAAHLDMRGAAPATPGDLLRIHPAGYLDAFRALSDAHGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ H A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIAALSAGLAIAAIDTVVAEHAVNAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G G+V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPVAIEAARAKHGIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+ GEG G G NLN+PL G+GD Y +A +VVPA+++F P +IV+ G D+SA D
Sbjct: 214 GGGDRGEGAGVGANLNVPLLAGSGDDAYRYAFERIVVPALERFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E
Sbjct: 274 PLARMLLHTDSYRFMTRAVKDAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVE 326
>gi|448497564|ref|ZP_21610517.1| histone deacetylase superfamily protein [Halorubrum coriense DSM
10284]
gi|445699795|gb|ELZ51815.1| histone deacetylase superfamily protein [Halorubrum coriense DSM
10284]
Length = 334
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 161/311 (51%), Gaps = 30/311 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGI 79
+ D L+HDTG E+HPEN DR++ I +RG + + +
Sbjct: 5 YSDRCLDHDTG----------------ERHPENPDRLRAI----RRGLTKRHGVEYVEAD 44
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA+ + + H Y++EL GG TV + G+W AAL A G A + LD
Sbjct: 45 PAEKAAVTAVHDSGYVDELESFVADGGGSWDPDTVASDGTWDAALTAAGLAQWAAREALD 104
Query: 140 GHG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGN 196
G + +A+ RPPGHHA A G+CF NNA +A Q A++ +V + D DVH+GN
Sbjct: 105 GATGRQTPFAIGRPPGHHAVTDDAMGFCFFNNAAVAAQTAIDEDLADRVAIFDWDVHHGN 164
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY S V S+H + +P G +DE GEG+G G N+PL G GD Y
Sbjct: 165 GTQDIFYDSGDVFYASIHED-----GLYPDTGALDETGEGDGEGTTANLPLAAGAGDADY 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
++A+ E + PA+ +F+P++ ++ G D+ DP R ++ +GY + +R+LAD G
Sbjct: 220 LYAVDEGIAPAVDRFDPDLFIVSAGFDARRHDPISRMRVSSEGYALLTDRIRTLADDV-G 278
Query: 317 GRLLIVQEGGY 327
V EGGY
Sbjct: 279 AADAYVLEGGY 289
>gi|288931038|ref|YP_003435098.1| histone deacetylase [Ferroglobus placidus DSM 10642]
gi|288893286|gb|ADC64823.1| Histone deacetylase [Ferroglobus placidus DSM 10642]
Length = 359
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 168/314 (53%), Gaps = 16/314 (5%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
HPE +R+ + L I I + PA+ +L HT +YI L A K GG
Sbjct: 20 HPERRERLAYTIDQLTEEGIFEDERIVLINPEPAKEEDVLRVHTREYIEFLKAASKTGGF 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ D T + G + A+LA G + A K+V++G + A+A+VRPPGHHA+P G+C++
Sbjct: 80 IDFD-TNVPVGLFEVAMLAAGGAIKAAKYVVEGKVRNAFAMVRPPGHHAKPYTGAGFCYI 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + V+ G +++++D D H+G+GT E FY + VL IS H P +P
Sbjct: 139 NNVAVMVEWLKRRGFKRILILDWDAHHGDGTQEIFYEDDSVLFISTHQM-----PLYPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E+G+G G GY +NIPLP GT D Y++ +++ P ++F+P I + GQD+
Sbjct: 194 GYPHEVGKGRGEGYTINIPLPPGTSDESYLYVFEKVIEPVAEEFKPEFIAISAGQDNHFT 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT----YSAYCLHATLEGV 343
DP LT GY EM + LA++ GRL+ V EGGY V Y+ + A L G+
Sbjct: 254 DPLTGLALTARGYAEMMKRAVDLAEKLCKGRLVAVLEGGYSVESALPYTNLGIIAALAGM 313
Query: 344 ----LNLPLALLSD 353
+ P +LS+
Sbjct: 314 DISNIREPAKILSE 327
>gi|110678513|ref|YP_681520.1| histone deacetylase family protein [Roseobacter denitrificans OCh
114]
gi|109454629|gb|ABG30834.1| histone deacetylase family protein [Roseobacter denitrificans OCh
114]
Length = 366
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 161/298 (54%), Gaps = 8/298 (2%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L + E R+KN++ + +S + A LL H Y++E AGG
Sbjct: 37 LPETQEAKRRLKNLMDVTG---LSNDLDVRRAPMATREDLLRVHPASYLDEFKRLSDAGG 93
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T G + A L+ G ++A+ V+ G + AYAL RPPGHH P +G+C
Sbjct: 94 GELGRRTPFATGGYEIASLSAGLVVAAVDAVVSGDLENAYALSRPPGHHCLPDYPNGFCL 153
Query: 167 LNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
L N +A++ A G K VVV+D DVH+GNGT +Y VLTISLH G
Sbjct: 154 LANIAIAIEAAQAKGFAKRVVVLDWDVHHGNGTEAIYYDRPDVLTISLHQE----GNYPL 209
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + + G G+G GYNLN+PL GTG GY+HAM +V+P I F+P++IV+ G D+S
Sbjct: 210 DTGGIADRGTGDGVGYNLNLPLIAGTGHTGYLHAMDTIVLPQIAAFKPDLIVVACGYDAS 269
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
A DP R T + +R++ +++ A + GRL++ EGGY Y +C HATLE +
Sbjct: 270 AIDPLARMLATAETFRKLTERIKTAAQEHCDGRLVLAHEGGYSEVYVPFCGHATLEAL 327
>gi|170699758|ref|ZP_02890792.1| histone deacetylase superfamily [Burkholderia ambifaria IOP40-10]
gi|170135349|gb|EDT03643.1| histone deacetylase superfamily [Burkholderia ambifaria IOP40-10]
Length = 369
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 154/293 (52%), Gaps = 5/293 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + +S+++ ++ ++ PA LL H Y++ A G +
Sbjct: 38 YAESPDSKRRFLSLVQASGLAAHLDMRGAAPATTGDLLRIHPASYLDAFRALSDAHGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ H A++L RPPGHH G+C L N
Sbjct: 98 GDLAPFGKGSYEIATLSAGLAIAAIDTVVGEHAANAFSLSRPPGHHCLRDRPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G G+V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHGIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+ GEG G G NLN+PL G+GD Y +A +V+PA+++F P +IV+ G D+SA D
Sbjct: 214 GGGDRGEGAGVGANLNVPLLAGSGDDAYRYAFERIVLPALERFRPELIVVASGLDASAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
P R L D YR M R ++ A R+ GGRL+IV EGGY Y +C A +E
Sbjct: 274 PLARMLLHTDSYRFMTRAMKEAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVE 326
>gi|89053501|ref|YP_508952.1| histone deacetylase superfamily protein [Jannaschia sp. CCS1]
gi|88863050|gb|ABD53927.1| histone deacetylase superfamily [Jannaschia sp. CCS1]
Length = 366
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 160/328 (48%), Gaps = 12/328 (3%)
Query: 20 FWDDGMLNHDTGK--GLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHS 77
FWD+ H G GL G G ++ PEN + + +V++L+ + ++
Sbjct: 6 FWDERCFWHSGGNYAGLLQVG---GLIQPGGGLPENPETKRRLVNLLRVTGLWEGLATQQ 62
Query: 78 GIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHV 137
P LL H DY+ GG + T P + A ++ G +A+
Sbjct: 63 ATPVTQDDLLRIHPSDYLASFRAKSAEGGGELGLRTPFGPDGYDIACVSAGLAKAALFAT 122
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGN 196
L G K AYAL RPPGHH P +G+C L N +A++ A +V VID DVH+GN
Sbjct: 123 LKGDVKNAYALSRPPGHHCLPDFPNGFCLLANIAIAIEAAQTVKLTDRVAVIDWDVHHGN 182
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
GT FY + VLTISLH ++P G ++ G G GYNLNIPLP GTG G
Sbjct: 183 GTEAIFYDRDDVLTISLHQER-----NYPLDTGDFEDRGSEAGVGYNLNIPLPPGTGHAG 237
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y A LV+P++ F+P+ I++ G D+S DP R D +R M + AD
Sbjct: 238 YEEAFERLVIPSLHAFQPDAIIVACGYDASLVDPLSRMIAGGDTFRAMTDMTMEAADDLC 297
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGV 343
GGRL +V EGGY + + H LE +
Sbjct: 298 GGRLTVVHEGGYSEVHVPFLGHGVLESM 325
>gi|448476277|ref|ZP_21603441.1| histone deacetylase superfamily protein [Halorubrum aidingense JCM
13560]
gi|445815826|gb|EMA65745.1| histone deacetylase superfamily protein [Halorubrum aidingense JCM
13560]
Length = 334
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 167/315 (53%), Gaps = 21/315 (6%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPY-ISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAG 105
E+HPEN DR++ I +RG + + + PA ++ + H Y++EL D G
Sbjct: 16 ERHPENPDRLRAI----RRGLAKRHGVEYTDADPAAREEVAAVHDEAYVDELETFVDDGG 71
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG-HGK-IAYALVRPPGHHAQPTMADG 163
G D TV + G+W AAL A G A + LDG +G+ +A+ RPPGHHA A G
Sbjct: 72 GSWDPD-TVASEGTWDAALTAAGLAQWAARSALDGANGRHTPFAIGRPPGHHAVADDAMG 130
Query: 164 YCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF NNA +A Q L+ G +V + D DVH+GNGT + FY VL S+H
Sbjct: 131 FCFFNNAAVAAQTVLDDGDADRVAIFDWDVHHGNGTQDIFYDRGDVLYASIHEK-----G 185
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P G +DE G G G G +N+PL G GD Y+ A+ E V PAI +F+P+++++ G
Sbjct: 186 LYPDTGDLDETGRGAGEGTTVNLPLAAGAGDADYLQAIDEAVGPAIDRFDPDLVIVSAGF 245
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA---YCLHAT 339
D+ DP R ++ +GY M +R++AD G V EGGY + A +H T
Sbjct: 246 DAHRHDPISRMRVSSEGYALMTDRIRTVADDV-GAATAYVLEGGYGLDTLAEGVSMVHET 304
Query: 340 LEGVLNLPLALLSDP 354
+G P+ + DP
Sbjct: 305 YDG--RTPVEVDEDP 317
>gi|224825492|ref|ZP_03698597.1| histone deacetylase superfamily [Pseudogulbenkiania ferrooxidans
2002]
gi|224602413|gb|EEG08591.1| histone deacetylase superfamily [Pseudogulbenkiania ferrooxidans
2002]
Length = 370
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 163/293 (55%), Gaps = 5/293 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + + S++ ++ + S PA LL H Y+ AGG +
Sbjct: 39 HAESPETKRRLKSLMDVSGLTRQLQVCSAPPASDDDLLRVHGAGYLARFKALSDAGGGEL 98
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL G AYAL RPPGHH P A G+CFL+N
Sbjct: 99 GPHAPIGRGSYEIAKLSAGLALAAVDAVLAGEADNAYALSRPPGHHCLPDQAMGFCFLSN 158
Query: 170 AGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+AV+ A G +V ++D DVH+GNGT +Y+ VLTISLH + G + P +
Sbjct: 159 IAVAVEAAKAKYGIERVAILDWDVHHGNGTQAIYYQRPDVLTISLHQD-GCFPPGY---S 214
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
V++ G G G G NLN+PL G G Y++AM +VVPA+++F P +IV+ G D++A D
Sbjct: 215 GVEDRGAGAGEGANLNVPLLPGGGHDAYLYAMERIVVPALERFRPELIVVACGYDANAVD 274
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
P R D +REM R VR +A++++ RL++V EGGY Y +C A LE
Sbjct: 275 PLARMLAHSDTFREMTRRVREMAEQHASDRLVLVHEGGYSEAYVPFCGLAVLE 327
>gi|392411099|ref|YP_006447706.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
gi|390624235|gb|AFM25442.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
Length = 354
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 154/284 (54%), Gaps = 6/284 (2%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
E HPE +R++ I +++ + A + ++ + H P Y+N++V
Sbjct: 19 EYHPECPERLEVIYNMIDQLESELNFVEIPNREASLEEIATNHDPRYVNQIVTTAGRSNT 78
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ T SW AA AVG + + V++G + +A +RPPGHHA+ A G+C
Sbjct: 79 FLDPDTCTCAHSWEAASKAVGGLFNLVDAVIEGRVRNGFAFIRPPGHHAERRRAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN LA + A++ +V +ID D+H+GNGT FY +VL IS+H P +P
Sbjct: 139 NNIALAARYAISRHKLSRVAIIDWDLHHGNGTQNAFYEEEEVLFISVHQY-----PHYPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G + E+G+G G G+ +NIPL G GD Y+ L+ P ++ ++P +I++ G D+
Sbjct: 194 TGGIREVGQGRGEGHTINIPLAAGAGDDEYLTVFHLLIAPVLEMYKPELILVSAGFDAHE 253
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T GY +M +I+ LA+ YS GRL++ EGGY++T
Sbjct: 254 RDPLGGMAVTEKGYSQMLQILMHLAELYSSGRLILTLEGGYNLT 297
>gi|329898677|ref|ZP_08272439.1| histone deacetylase superfamily [gamma proteobacterium IMCC3088]
gi|328920778|gb|EGG28233.1| histone deacetylase superfamily [gamma proteobacterium IMCC3088]
Length = 371
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 175/363 (48%), Gaps = 8/363 (2%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ WD+ + +D G + + F+ PE + + I+++L+ + +
Sbjct: 5 LVWDERYMWYDFGS--YASVFNDYRFIQPGTQPETPESKRRILNLLETAGLLEQLKLIKP 62
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
+L H DYIN + E G G ++ G + A LA G T +A+ VL
Sbjct: 63 ACVSNEELALVHDLDYINRVAEISADHGGYAGSGLLMPSGGFELAALAAGGTKAAIDAVL 122
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNG 197
+ AYALVRPPGHHA+ C +N +AV+ A+ G KV +ID D H+GNG
Sbjct: 123 NKEVSNAYALVRPPGHHAEKDTGMALCVFSNIAVAVKSAMQEHGLRKVAIIDWDAHHGNG 182
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T FY VLT+S+H + +G G V+ GEG+G GYNLNIPLP G+G Y+
Sbjct: 183 TESAFYSDPSVLTLSIHQDQMIYG-----RGFVEHNGEGDGEGYNLNIPLPPGSGTGAYL 237
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
A +++PA+ +F P++IV+ G D+ DP R L + +R M R LA G
Sbjct: 238 TAFERIIIPAVTQFGPDLIVVASGLDAGFSDPTARMLLHSESFRLMTRYTMELAANVCSG 297
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
L++ EGGY T + + A E + L + + + F V+ + + + Q+
Sbjct: 298 NLVLSHEGGYDPTMTPFLALAIFEELSGLKSRITKEDNPFEGPYTGFIVEEHQKLSEQQD 357
Query: 378 DVI 380
+
Sbjct: 358 QFL 360
>gi|302870568|ref|YP_003839205.1| histone deacetylase superfamily protein [Micromonospora aurantiaca
ATCC 27029]
gi|302573427|gb|ADL49629.1| histone deacetylase superfamily [Micromonospora aurantiaca ATCC
27029]
Length = 376
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 151/279 (54%), Gaps = 8/279 (2%)
Query: 81 AQIPQLLSFHTPDYINEL-VEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVL 138
A + +LL HT ++ + ++D G DG + + GS+ A LA G + + +
Sbjct: 67 ATVAELLRVHTEAHVQHIKAQSDLRAGGDAGDGFSPVGHGSYDIARLAAGGLIELVTAAV 126
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNG 197
G YAL+RPPGHHA G+C N+ +A + A G ++ V+D D H+GNG
Sbjct: 127 HGDITNGYALLRPPGHHATAEAGMGFCLFNSIAVAARHAQAELGLARIAVVDFDAHHGNG 186
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T FY VLTISLH G P +G E G G G GY LN+PLP G+G Y+
Sbjct: 187 TQSIFYDDPSVLTISLHQA----GCFPPDSGWTHENGTGYGTGYALNVPLPPGSGHAAYL 242
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
AM ++V+P + +F P++I+L G D++ +DP RQ LT YREM R++ ADR G
Sbjct: 243 SAMHQVVLPVLDRFAPDLILLAAGFDANVWDPLARQMLTAASYREMTRLLIDAADRLCHG 302
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
RL+ EGGY+ Y YC A LE + ++DP+A
Sbjct: 303 RLIAAHEGGYNPWYVPYCALAFLEELAGT-TTHVTDPLA 340
>gi|148292204|dbj|BAF62919.1| putative histone deacetylase family protein [uncultured bacterium]
Length = 366
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 161/328 (49%), Gaps = 17/328 (5%)
Query: 20 FWDDGMLNHDTGKGLFDTGF----DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
FW + H G F T +P L + PE R+KN++ + G +
Sbjct: 7 FWHERCFWHGAGHFAFLTPVGGLVEPSNASRLPEAPETKRRLKNLLDV--SGLAGDLVCT 64
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
+ IPA +LL+ HT YI++ G + T PG + A L+ G A+
Sbjct: 65 DAIIPADQDELLAVHTKAYIDDFKRLSDENGGELGLRTPFGPGGYDIARLSAGMVRQALF 124
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
VLD AYAL RPPGHH P +G+C LNN +AVQ A +G +V ++D DVH+
Sbjct: 125 AVLDDQLDNAYALSRPPGHHCLPDFPNGFCLLNNIAIAVQAARRAGKTERVAIVDWDVHH 184
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GNGT FY VLTISLH ++P G + G NLNIPL G G
Sbjct: 185 GNGTEHIFYDDADVLTISLHQER-----NYPLDTGDAKDTGGPAAALSNLNIPLLPGGGH 239
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y++A+ LV+P + F+P+++++ G D+S DP R D + EM + + +A
Sbjct: 240 DTYLYALQRLVIPKLLAFKPDIVIVACGFDASGVDPLSRMLCGSDTFTEMTKALMQIA-- 297
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLE 341
G RL++ EGGY + +C HA LE
Sbjct: 298 --GNRLVMAHEGGYSEVHVPFCGHAVLE 323
>gi|393758565|ref|ZP_10347385.1| histone deacetylase superfamily protein [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
gi|393163001|gb|EJC63055.1| histone deacetylase superfamily protein [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
Length = 369
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 163/313 (52%), Gaps = 14/313 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGGK 107
HP+ R +V G I S + PA+ +L HT +++ + V A GG
Sbjct: 39 HPDTKRRFHELVC--ASGQIDHLTSIQAK-PARDKDILRVHTAEHLENMKRVSALPTGGD 95
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T + G A+L+ G + +K V+ YALV PPGHHA A G+C
Sbjct: 96 TGDGITTMGNGGLEIAMLSAGGAIELVKKVVSREVSNGYALVNPPGHHAPRAGAMGFCIF 155
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A A G +V ++D DVH+GNGT + ++ VLTISLH + P
Sbjct: 156 NNTSVAAAYAREELGLDRVAILDWDVHHGNGTQDIWWNDPSVLTISLHQH-----LCFPA 210
Query: 227 N-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
N G E GEG G GYNLNIPLP G G+ Y++AM ++V+PA++ ++P +I++ G D+S
Sbjct: 211 NSGFTTERGEGGGLGYNLNIPLPPGGGNAAYLYAMEKVVLPALRSYKPQLIIVGSGFDAS 270
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
DP R +T G+R+M R + A+ GR+ VQEGGY Y +C A +E +
Sbjct: 271 MMDPLARMMVTASGFRQMARQIIDCAEEVCEGRIAFVQEGGYSPHYLPFCGQAVIEELTG 330
Query: 346 LPLALLSDPIAYY 358
+ L+DP A +
Sbjct: 331 --VRTLADPYAEF 341
>gi|167568281|ref|ZP_02361155.1| histone deacetylase family, putative [Burkholderia oklahomensis
C6786]
Length = 373
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 172/326 (52%), Gaps = 25/326 (7%)
Query: 39 FDPGFLEVLE---------------KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL + +H ++ R+ +L ++ ++ + A
Sbjct: 8 FDPAFLTHRQGDLVYIVPDGALNFGEHFDSPLRLAYTKQLLDAVGMTERLTRIAFASATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V + + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVPLGEDAAGSASTERVARLAAGAACAAVDTVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGIERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN+N+PLP+GTGD GY H
Sbjct: 188 QVFYDDPSVLFVSLHEAE-----NFPVDGGEARETGGGAGAGYNVNVPLPSGTGDAGYQH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P I F P +I++ GQD++AFDP GR + DG+R+M R +R A GR
Sbjct: 243 AFDELVLPLIDAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRQMARALRQAAGGVCDGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
+ ++QEGGY + Y LEG++
Sbjct: 303 IAMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|322370186|ref|ZP_08044748.1| histone deacetylase superfamily protein [Haladaptatus
paucihalophilus DX253]
gi|320550522|gb|EFW92174.1| histone deacetylase superfamily protein [Haladaptatus
paucihalophilus DX253]
Length = 341
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 160/314 (50%), Gaps = 28/314 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+N + + L HDTGK +HPEN DR++ I L R Y+
Sbjct: 1 MNFGYSEACLAHDTGK----------------RHPENPDRLRAIRQALTRKHGVEYVE-- 42
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
PA ++ + H Y+ E E + GG TV +W AAL + G A K
Sbjct: 43 -SPPATEAEVTAVHDGGYVTEFREFCEDGGGNWDPDTVAVAATWDAALESAGLAEWAAKA 101
Query: 137 VLDGHG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVH 193
L G +AL RPPGHHA A G+CF NNA +A + ++ G +V ++D DVH
Sbjct: 102 ALSGEDGRSTPFALGRPPGHHAVEDDAMGFCFFNNAAVAARSVIDEGEAERVAILDWDVH 161
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
+GNGT + FY + V +S+H + +P G +DE GEG+G G LN+PLP G+GD
Sbjct: 162 HGNGTQDIFYGDDDVFYVSIHED-----GLYPGTGEIDESGEGDGEGTTLNVPLPAGSGD 216
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y A +LV P++ F+P+++++ G D+ DP R ++ +GY + VR LAD
Sbjct: 217 PEYRSAFDDLVAPSLLDFDPDLVLVSAGFDAHRHDPISRMRVSTEGYGMLTARVRELADE 276
Query: 314 YSGGRLLIVQEGGY 327
+G L V EGGY
Sbjct: 277 -AGAALGFVLEGGY 289
>gi|352106917|ref|ZP_08961677.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
gi|350597513|gb|EHA13648.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
Length = 364
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 180/336 (53%), Gaps = 28/336 (8%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLE-----------VLEKHPENSDRIKNIVSILKRGP 68
F+DD +L H+ D F P ++ V K+PE+ R+ I +L+R P
Sbjct: 7 FYDDRVLAHEPN---IDADFLPQRIDKRIRHLLAGLPVPWKYPEHPGRLTAIQQLLERAP 63
Query: 69 ISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVG 128
I + G A QL HT Y++++ + D T ++PGS AA +A G
Sbjct: 64 IEG-LKIEGGKAATHEQLARVHTTSYLSDIFSLRGKNAWLDVDTTAVSPGSVDAAEVAAG 122
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
T ++A++ V++ K A+ALVRPPGHHA+P A G+C NN +A A ++ GC +V++
Sbjct: 123 TAIAAVEAVMEKRTKSAFALVRPPGHHAEPVRARGFCLFNNVAVAAAHARSALGCERVLI 182
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
+D D H+GNGT + F+ V+ +H P +P +G ++E+G G G +N+PL
Sbjct: 183 VDWDAHHGNGTQDIFWAEPDVMFFDIHRA----APFYPGSGHLEEVGAGLAEGTTINVPL 238
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGYREMG 304
P G GD Y+ A +++ PA F+P++I++ S+ FDP+ ++ +G+ +
Sbjct: 239 PAGAGDEAYLKAFRDILAPAAAWFKPDIILV-----SAGFDPHWHDLALNVSYEGFGALT 293
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
++ LA+++ GRL+ V EGGY++ A A L
Sbjct: 294 GFMQQLAEQHCDGRLVFVLEGGYNLESLANGTRAVL 329
>gi|399575762|ref|ZP_10769520.1| histone deacetylase superfamily [Halogranum salarium B-1]
gi|399240030|gb|EJN60956.1| histone deacetylase superfamily [Halogranum salarium B-1]
Length = 337
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 173/349 (49%), Gaps = 44/349 (12%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGI 79
+ D L HDTG +HPE +DR++ I KRG + + +
Sbjct: 5 YSDTCLEHDTGA----------------RHPETADRLRAI----KRGLAKRHGVEYVDAD 44
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA + + H DY+ E+ E +GG TV +W AAL + G + A + LD
Sbjct: 45 PATEEGVSAVHADDYVEEVREFCASGGGNWDPDTVACEETWDAALQSAGLSQWAAREALD 104
Query: 140 GHG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGN 196
GH + +AL RPPGHHA A G+CF NNA +A Q ++ G +V + D DVH+GN
Sbjct: 105 GHDGRQTPFALGRPPGHHAVGDDAMGFCFFNNAAVAAQDVIDDGLAERVAIFDWDVHHGN 164
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY V S+H +P G DE G+G+G G NIPLP G GD Y
Sbjct: 165 GTQDIFYDRGDVFYASIHEE-----GLYPGTGDADETGDGDGEGTTQNIPLPAGAGDADY 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ A+ EL+ PA+ +F+P+++++ G D+ DP R ++ +GY M VR + ++
Sbjct: 220 MLAIDELLTPALDRFDPDLLIVSAGFDAHRHDPISRMRVSTEGYALMTDRVREMCEQVDA 279
Query: 317 GRLLIVQEGGY---HVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDE 362
L V EGGY ++ +H T +G +PIA P+DE
Sbjct: 280 A-LCFVLEGGYGLDTLSEGVATVHETFDG---------REPIA--PDDE 316
>gi|448746849|ref|ZP_21728514.1| Histone deacetylase superfamily [Halomonas titanicae BH1]
gi|445565777|gb|ELY21886.1| Histone deacetylase superfamily [Halomonas titanicae BH1]
Length = 362
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 179/325 (55%), Gaps = 28/325 (8%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLE-----------VLEKHPENSDRIKNIVSILKRGP 68
F+DD +L H+ D F P ++ V K+PE+ R+K I +L++ P
Sbjct: 7 FYDDRVLAHEPN---IDADFLPQRIDKRIRHLLAGLPVPWKYPEHPGRLKAIQHLLEKAP 63
Query: 69 ISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVG 128
I+ + G A QL HT Y++++ + D T ++PGS AA +A G
Sbjct: 64 IAG-LHIEGGKVATHEQLARVHTTSYLSDIFSLRGKNAWLDVDTTAVSPGSVDAAEVAAG 122
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
T ++A++ V++ K A+ALVRPPGHHA+P A G+C NN +A A ++ GC +V++
Sbjct: 123 TAIAAVEAVMEKRAKSAFALVRPPGHHAEPVRARGFCLFNNVAVAAAHARSALGCERVLI 182
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
+D D H+GNGT + F+ V+ +H P +P +G ++E+G G G +N+PL
Sbjct: 183 VDWDAHHGNGTQDIFWAEPDVMFFDIHRA----APFYPGSGHLEEVGAGLAEGTTINVPL 238
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGYREMG 304
P G GD Y+ A +++ PA F+P++I++ S+ FDP+ ++ +G+ +
Sbjct: 239 PAGAGDEAYLKAFRDILAPAAAWFKPDIILV-----SAGFDPHWHDLALNVSYEGFGALT 293
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHV 329
++ LA+++ GRL+ V EGGY++
Sbjct: 294 GFLQQLAEQHCDGRLVFVLEGGYNL 318
>gi|167562404|ref|ZP_02355320.1| histone deacetylase family, putative [Burkholderia oklahomensis
EO147]
Length = 369
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A LL H Y+ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAARLDMPSAPAATDADLLRIHPAHYLEAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G ++A+ VL A++L RPPGHH G+C N
Sbjct: 98 GELAPFGKGSYEIAALSAGLAIAAVDAVLAERAANAFSLSRPPGHHCLRDKPMGFCLFAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIALEAARAKHRIERVAVIDWDVHHGNGTQAIYYDDPHTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y + +V+PA+ F+P +IV+ G D++A D
Sbjct: 214 GADERGAGAGVGANVNVPLLAGAGDDAYRYTFERIVLPALDAFKPELIVVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
P R L D YR M R V+ A R+ GGRL++V EGGY Y +C HA +E +
Sbjct: 274 PLARMQLHSDSYRFMTRAVKEAAQRHCGGRLVVVHEGGYSEAYVPFCGHAIVEAL 328
>gi|385331155|ref|YP_005885106.1| histone deacetylase superfamily protein [Marinobacter adhaerens
HP15]
gi|311694305|gb|ADP97178.1| histone deacetylase superfamily protein [Marinobacter adhaerens
HP15]
Length = 368
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 181/340 (53%), Gaps = 27/340 (7%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLE-----VLE------KHPENSDRIKNIVSILK 65
+NVF+D+ ML H+ D F P +E +L+ +PE+ RI I L
Sbjct: 7 VNVFYDEIMLGHNPE---VDLPFMPSRVEKRVRSILQGLDFKWSYPEHPGRISAIKEYLD 63
Query: 66 RGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALL 125
P++ A QL HT Y++ + D + D T ++P S AA
Sbjct: 64 ENPVAGTQFKSGAAAATYDQLARVHTTSYLDHIFSLDGKRAWLDKDTTAVSPDSIKAATA 123
Query: 126 AVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGK 184
A G ++A++ V+ G A+AL+RPPGHHA+P A G+C LNN +A A GC K
Sbjct: 124 AAGNAIAAVESVVKGECNSAFALIRPPGHHAEPVRARGFCLLNNVAIAAAHAQAKLGCEK 183
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++ID D H+GNGT + F+ VL H P +P +G ++E+G+G G GY +N
Sbjct: 184 ILIIDWDAHHGNGTQDIFWADPDVLFFDTHCA----APFYPGSGHLEEIGDGLGEGYTIN 239
Query: 245 IPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGYR 301
+PLP GD + E+++PA F+P+++++ S+ FDP+ LT DG++
Sbjct: 240 VPLPETAGDVAFEKVFREILMPAADYFQPDLVLV-----SAGFDPHRNDMALNLTYDGFK 294
Query: 302 EMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+ IV+++AD++ GRL +V EGGY ++ + +HA LE
Sbjct: 295 VITGIVQAIADKHCEGRLALVLEGGYSLSSLSKGVHAVLE 334
>gi|358447847|ref|ZP_09158360.1| histone deacetylase superfamily protein [Marinobacter manganoxydans
MnI7-9]
gi|357227972|gb|EHJ06424.1| histone deacetylase superfamily protein [Marinobacter manganoxydans
MnI7-9]
Length = 367
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 181/340 (53%), Gaps = 27/340 (7%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLE-----VLE------KHPENSDRIKNIVSILK 65
+NVF+D+ ML H+ D F P +E +L+ +PE+ RI I L
Sbjct: 7 VNVFYDEIMLGHNPE---VDLPFMPSRVEKRVRSILQGLDFKWSYPEHPGRISAIKEYLD 63
Query: 66 RGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALL 125
P++ A QL HT Y++ + D + D T ++P S AA
Sbjct: 64 ENPVAGTQFKSGAAAATYDQLARVHTTSYLDHIFSLDGKRAWLDKDTTAVSPDSIKAATA 123
Query: 126 AVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGK 184
A G ++A++ V+ G A+AL+RPPGHHA+P A G+C LNN +A A GC K
Sbjct: 124 AAGNAIAAVESVVKGECDSAFALIRPPGHHAEPVRARGFCLLNNVAIAAAHAQAKLGCEK 183
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++ID D H+GNGT + F+ VL H P +P +G ++E+G+G G GY +N
Sbjct: 184 ILIIDWDAHHGNGTQDIFWADPDVLFFDTHCA----APFYPGSGHLEEIGDGLGEGYTIN 239
Query: 245 IPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGYR 301
+PLP GD + E+++PA F+P+++++ S+ FDP+ LT DG++
Sbjct: 240 VPLPETAGDVAFEKVFREILMPAADYFQPDLVLV-----SAGFDPHRNDMALNLTYDGFK 294
Query: 302 EMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+ IV+++AD++ GRL +V EGGY ++ + +HA LE
Sbjct: 295 VITGIVQAIADKHCEGRLALVLEGGYSLSSLSKGVHAVLE 334
>gi|386811556|ref|ZP_10098781.1| histone deacetylase [planctomycete KSU-1]
gi|386403826|dbj|GAB61662.1| histone deacetylase [planctomycete KSU-1]
Length = 311
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 163/328 (49%), Gaps = 22/328 (6%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ +D+ L HDTG G HPEN+ R++N V LK + +
Sbjct: 4 LMYDNIFLKHDTGHG----------------HPENAKRLENTVKHLKATGLWDQLRVEKS 47
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
A + ++ HT +YI + GG + T+++ S+ AA+ AVG L+A+ ++
Sbjct: 48 RAASLEEIGLIHTENYIQAIKHIANTGGGQLDSDTIISAASYDAAVHAVGAPLAAIDFIM 107
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNG 197
G K A+ L+RPPGHHA P G+C NN +A + + ++ +ID DVH+GNG
Sbjct: 108 KGEEKNAFCLIRPPGHHATPARGMGFCLFNNVAVAAKYIQSKYKLERIFIIDWDVHHGNG 167
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + F+ +L S+H P +P +G +E G +G G+ +N+P+P + Y+
Sbjct: 168 TQDAFFNDPTILYFSMHRY-----PFYPGSGRKEESGWDKGEGFTINVPVPANIPSQRYI 222
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
T+++ +F P I++ G D+ DP G L + +R + IV A +Y G
Sbjct: 223 ELFTDVIKQNADQFIPEFIIISAGFDTYKKDPIGGLNLDREDFRILTEIVIRTAQKYCNG 282
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLN 345
RL+ EGGY+ + C+ A L+ +L
Sbjct: 283 RLVSCLEGGYNFSDLPLCIEAHLKALLQ 310
>gi|359395499|ref|ZP_09188551.1| hypothetical protein KUC_2156 [Halomonas boliviensis LC1]
gi|357969764|gb|EHJ92211.1| hypothetical protein KUC_2156 [Halomonas boliviensis LC1]
Length = 362
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 28/336 (8%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLE-----------VLEKHPENSDRIKNIVSILKRGP 68
F+DD +L H+ D F P ++ V K+PE+ R+ I +L++ P
Sbjct: 7 FYDDRVLAHEPN---IDADFLPQRIDKRIRHLLAGLPVPWKYPEHPGRLIAIQQLLEKTP 63
Query: 69 ISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVG 128
I+ + G A QL HT Y++++ + D T ++PGS AA +A G
Sbjct: 64 IAG-LHIEGGKAATHEQLARVHTTSYLSDIFSLRGKNAWLDVDTTAVSPGSIDAAEVAAG 122
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
T ++A++ V+D K A+ALVRPPGHHA+P A G+C NN +A A ++ GC +V++
Sbjct: 123 TAIAAVEAVVDKRAKSAFALVRPPGHHAEPVRARGFCLFNNVAVAAAHARSALGCERVLI 182
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
+D D H+GNGT + F+ V+ +H P +P +G ++E+G G G +N+PL
Sbjct: 183 VDWDAHHGNGTQDIFWAEPDVMFFDIHRA----APFYPGSGHLEEVGAGLAEGTTINVPL 238
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC---LTMDGYREMG 304
P G GD Y+ A +++ PA F+P++I++ S+ FDP+ ++ +G+ +
Sbjct: 239 PAGAGDEAYLKAFRDILAPAAAWFKPDIILV-----SAGFDPHWHDLALNVSYEGFGALT 293
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
++ LA+++ GRL+ V EGGY++ A A L
Sbjct: 294 GFMQQLAEQHCDGRLVFVLEGGYNLESLANGTRAVL 329
>gi|300088549|ref|YP_003759071.1| histone deacetylase superfamily protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299528282|gb|ADJ26750.1| histone deacetylase superfamily [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 309
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 159/306 (51%), Gaps = 13/306 (4%)
Query: 39 FDPGFLEVLE--KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN 96
+DP FL HPE +R++ + L+ + + PA +L + HT DY+
Sbjct: 7 YDPLFLRHRPGPHHPEAPERLEAVWRHLESTGMIHRLKQLPSRPATAEELAAVHTADYLR 66
Query: 97 ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH-GKIAYALVRPPGHH 155
GG + D TVL+PGSW AA+ A G+ ++A++ V +G + L RPPGHH
Sbjct: 67 VAELLGSNGGALDLD-TVLSPGSWQAAVTAAGSAVAAVEAVTNGGVDSGCFLLSRPPGHH 125
Query: 156 AQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+C LNN +A + AL G + +ID DVH+GNGT F V +SLH
Sbjct: 126 AFAERGSGFCLLNNIAIATRAALERFGLERAAIIDWDVHHGNGTQAIFQDDPAVRCVSLH 185
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
P +P G + G LNIPLP G+GD Y+ A ELV PA+ P+
Sbjct: 186 QY-----PHYPGTGAAGDTGPEAN---RLNIPLPAGSGDEAYLKAFDELVAPAVAAHRPD 237
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
+I++ G D+ DP +T +G+ M R V+++A+RYS GRL+ V EGGYH A
Sbjct: 238 IILVSAGYDAHRDDPLSAMEVTAEGFAGMTRRVKTMAERYSHGRLVFVLEGGYHHRALAE 297
Query: 335 CLHATL 340
+ ATL
Sbjct: 298 SVSATL 303
>gi|325969238|ref|YP_004245430.1| histone deacetylase superfamily protein [Vulcanisaeta moutnovskia
768-28]
gi|323708441|gb|ADY01928.1| histone deacetylase superfamily [Vulcanisaeta moutnovskia 768-28]
Length = 348
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 162/303 (53%), Gaps = 28/303 (9%)
Query: 39 FDPGFLEVL--EKHPENSDRIKNIV-----SILKRGPISPYISWHSGIPAQIPQLLSFHT 91
+D +LE H EN RI I+ ++ PI+ W LL H
Sbjct: 6 YDNAYLEHKPPRSHIENPSRIMTIIKSISGTVTMEKPINDVNEW----------LLKVHD 55
Query: 92 PDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRP 151
DY+ + EA G + T ++PG+ AA LAVG L + VL G AYA+VRP
Sbjct: 56 EDYVRRIDEACDMGYVFIDADTYVSPGTCKAARLAVGAVLKGVDKVLSGEWGTAYAVVRP 115
Query: 152 PGHHA----QPTMA--DGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRS 205
PGHH + MA G+C NN + AL G KVV++D+DVH+GNGT E FY
Sbjct: 116 PGHHVGRSGRALMAPTQGFCIFNNVVVGAVYALEHGFNKVVILDVDVHHGNGTQEIFYED 175
Query: 206 NKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVV 265
+VL +SLH + + +P G +D++GEGEG G+N+N+PLP T D Y++A+ +V
Sbjct: 176 PRVLYVSLHQDPLT---IYPGTGFIDDVGEGEGEGFNVNVPLPPFTADDAYMNALDRVVW 232
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P I++F P +I++ +G D+ D L+++ Y + R +R++ + G ++ V EG
Sbjct: 233 PIIEEFRPQLILVSLGFDAHMLDSIANLRLSLNTYAYVFRRLRNMIGKVRG--VVFVLEG 290
Query: 326 GYH 328
GY+
Sbjct: 291 GYN 293
>gi|167561020|ref|ZP_02353936.1| histone deacetylase family, putative [Burkholderia oklahomensis
EO147]
Length = 371
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 172/326 (52%), Gaps = 25/326 (7%)
Query: 39 FDPGFLEVLE---------------KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL + +H ++ R+ +L ++ ++ + A
Sbjct: 8 FDPAFLTHRQGDLVYIVPDGALNFGEHFDSPLRLAYTKQLLDAVGMTERLTRIAFASATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V + + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVPLGEDAAGSASTERVARLAAGAACAAVDTVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGIERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN+N+PLP+GTGD GY H
Sbjct: 188 QVFYDDPSVLFVSLHEAE-----NFPVDGGEARETGGGAGAGYNVNVPLPSGTGDAGYQH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P I F P +I++ GQD++AFDP GR + +G+R+M R +R A GR
Sbjct: 243 AFDELVLPLIDAFAPQLILVSAGQDANAFDPLGRMRVQRNGFRQMARALRQAAGGVCDGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
+ ++QEGGY + Y LEG++
Sbjct: 303 IAMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|424901688|ref|ZP_18325204.1| histone deacetylase [Burkholderia thailandensis MSMB43]
gi|390932063|gb|EIP89463.1| histone deacetylase [Burkholderia thailandensis MSMB43]
Length = 370
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 151/265 (56%), Gaps = 10/265 (3%)
Query: 85 QLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
QLL H P+Y+ +L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 69 QLLRVHRPEYLRQLAEACAVAGEQVVPLGDDAAGSASTERVARLAAGAACAAVDAVMTGP 128
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAE 200
+ AYAL+RP GHHA A GYC+ NN +A + A G +V ++D DVH+GNGT +
Sbjct: 129 LRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAVHGVERVAIVDWDVHHGNGTQQ 188
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVHA 259
FY VL +SLH + P +G E G G G GYN N+PLP+GTGD GY HA
Sbjct: 189 VFYDDPSVLFVSLHE-----AANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYAHA 243
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R A GR+
Sbjct: 244 FDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGSTCDGRI 303
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVL 344
+++QEGGY + Y LEG++
Sbjct: 304 VMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|53717749|ref|YP_106735.1| histone deacetylase [Burkholderia pseudomallei K96243]
gi|167813616|ref|ZP_02445296.1| histone deacetylase family protein [Burkholderia pseudomallei 91]
gi|52208163|emb|CAH34093.1| histone deacetylase family protein [Burkholderia pseudomallei
K96243]
Length = 370
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 174/326 (53%), Gaps = 25/326 (7%)
Query: 39 FDPGFLE---------------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL L +H ++S R+ +L ++ ++ + A
Sbjct: 8 FDPAFLSHRQGDLVYVVPHGTLNLGEHFDSSLRLAYTKQLLDAVGMTERLTRVAFARATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN N+PLP+GTGD GY H
Sbjct: 188 QAFYDDPSVLFVSLHE-----AANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R A GGR
Sbjct: 243 AFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
++++QEGGY + Y LEG++
Sbjct: 303 IVMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|348670682|gb|EGZ10503.1| hypothetical protein PHYSODRAFT_261835 [Phytophthora sojae]
Length = 365
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 146/262 (55%), Gaps = 10/262 (3%)
Query: 85 QLLSFHTPDYINELVEAD-KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
QL HT Y+ EL A + G + + ++ A L+ G ++A V+DG
Sbjct: 65 QLERVHTRRYLEELERASAREEGGNAGEEAPFSQFAFDVARLSAGGVIAAADAVMDGRVD 124
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAE 200
AYAL RPPGHHA G+C LNN + + L+ + ++ ++D DVH+GNGT E
Sbjct: 125 RAYALTRPPGHHAVKDRGMGFCLLNNVAITAKHLLDAYPTQIRRIAIVDYDVHHGNGTQE 184
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHA 259
FY + VL +SLH ++ ++P + G + E G+G+G G+N+N+PLP G+G Y +A
Sbjct: 185 AFYEDDNVLFVSLHQDN-----NYPADSGAITERGDGKGEGFNINVPLPPGSGSGAYEYA 239
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+VVPA+ KF+P+ +++ G D+S DP L+ + +R M R + A R GGR+
Sbjct: 240 FKNVVVPALDKFKPDFVLVSSGFDASYADPLAAMILSSNVFRFMARELVEAAKRLCGGRI 299
Query: 320 LIVQEGGYHVTYSAYCLHATLE 341
+ EGGY TY +C A +E
Sbjct: 300 VFAHEGGYSETYVPFCGAAVIE 321
>gi|310823792|ref|YP_003956150.1| histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
gi|309396864|gb|ADO74323.1| Histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
Length = 342
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 168/303 (55%), Gaps = 14/303 (4%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG + HPE+ R+++I+S+L R P++ S A +L + HTP+ L+
Sbjct: 17 DPG-----QGHPESPARLQSILSVLARTPVAG-TQVRSPRSATAAELSAVHTPELRQALL 70
Query: 100 EADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
AG + V D T L+P S+ AALLA G + A++ V+ G + A+ALVRPPGHHA+P
Sbjct: 71 --GMAGHRAVIDEDTRLSPDSYDAALLAAGAAVGAVEEVMAGRARNAFALVRPPGHHAEP 128
Query: 159 TMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
A G+C NN +A + G +V+V+D DVH+GNGT F VL S+H
Sbjct: 129 GRAMGFCLFNNVAIAAEAGRRLGAERVLVLDWDVHHGNGTQAAFEGRRDVLYQSVHQY-- 186
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +P G E+G+G G G+++N LP G D Y +L++P F+P ++++
Sbjct: 187 ---PYYPGTGAPREVGQGAGEGFSVNCALPGGATDSDYRSIFEDLLLPIADSFQPQLMLV 243
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D DP G +T G+ M +RSLA+R GG+L++V EGGY + + +HA
Sbjct: 244 SAGFDPHRNDPLGGMLVTERGFAAMCAGLRSLAERLCGGKLVLVLEGGYSLEGLSQSVHA 303
Query: 339 TLE 341
+E
Sbjct: 304 CIE 306
>gi|225431711|ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera]
gi|296088531|emb|CBI37522.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 173/350 (49%), Gaps = 25/350 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPY------ISWHSGIPAQIPQLLSFHTPDYINELVEA 101
E HPE++ R+ IVS L++ +SP + HS PA + + S HT Y++ L ++
Sbjct: 92 ESHPESNFRVPAIVSALEKMELSPMFRGSEILELHSFSPASVEDIASVHTKAYVSGLEKS 151
Query: 102 -DKAGGK--MVCDG---TVLNPGSWGAALLAVGTTLSAMKHVLDGHGK-----IAYALVR 150
D+A K + DG T ++ +LLA G ++ + V+ + +AL+R
Sbjct: 152 MDQASQKGIIYIDGSGPTYATATTFQESLLAAGAGITLVDSVVAASKSSQDPPMGFALIR 211
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A G +V +ID DVH+GNGT + FY +
Sbjct: 212 PPGHHAIPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIF 271
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + S+P G +DE+G G G G LN+PLP G+GD E++VP+ Q
Sbjct: 272 FLSTHQDG-----SYPGTGKIDEVGHGSGEGATLNLPLPGGSGDIAMRTVFDEVIVPSAQ 326
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D DP T Y + ++ LA GGR + EGGY++
Sbjct: 327 RFKPDIILVSAGYDGHVLDPLASLQFTTGTYYMLASNIKQLAKDLCGGRCVFFLEGGYNL 386
Query: 330 TYSAYCLHATLEGVLNLP--LALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
+ +Y + + L P + DP Y E + I+ +K +
Sbjct: 387 SSLSYSVADSFRAFLGEPSLASEFDDPAILYEEPSTKVKQAIQKVKHLHS 436
>gi|255262113|ref|ZP_05341455.1| histone deacetylase family protein [Thalassiobium sp. R2A62]
gi|255104448|gb|EET47122.1| histone deacetylase family protein [Thalassiobium sp. R2A62]
Length = 366
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 154/297 (51%), Gaps = 10/297 (3%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L + PE R KN++ + G I +S + A LL H Y++ E AGG
Sbjct: 37 LPEAPETKRRFKNLMEVT--GLIGD-LSVRTAPEADRADLLRVHPATYLDTFKEMSDAGG 93
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ T G + L+ G + A + V G + AY+L RPPGHH P +G+C
Sbjct: 94 GELGLRTPFGAGGYEICALSAGLAVDATRAVTSGDLRNAYSLSRPPGHHCLPEFPNGFCL 153
Query: 167 LNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
++N +A + A G ++ VID DVH+GNGT FY VLTISLH H ++P
Sbjct: 154 MSNLAIAARAAQADHIGLRIAVIDWDVHHGNGTEAVFYDDADVLTISLHQEH-----NYP 208
Query: 226 -QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
G + G G G G NLNIPLP+G G + Y+ A LV PA++ P++I++ G D+
Sbjct: 209 LDTGDFADRGAGNGVGTNLNIPLPSGGGHQLYLEAFDRLVEPAVRAHRPDLIMIACGFDA 268
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+A DP R + D +R++ +LAD GR+++ EGGY Y +C HA +E
Sbjct: 269 AAIDPLSRMLASADTFRQLTARTMALADDLCDGRIVMTHEGGYSEVYVPFCGHAVIE 325
>gi|237810322|ref|YP_002894773.1| histone deacetylase family protein [Burkholderia pseudomallei
MSHR346]
gi|237506691|gb|ACQ99009.1| histone deacetylase family protein [Burkholderia pseudomallei
MSHR346]
Length = 370
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 174/326 (53%), Gaps = 25/326 (7%)
Query: 39 FDPGFLE---------------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL L +H ++ R+ +L ++ ++ + A
Sbjct: 8 FDPAFLSHRQGDLVYVVPHGTLNLGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G V E G G G GYN N+PLP+GTGD GY H
Sbjct: 188 QAFYDDPSVLFVSLHE-----AANFPVDGGEVRETGGGAGAGYNANVPLPSGTGDAGYRH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R A GGR
Sbjct: 243 AFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
++++QEGGY + Y LEG++
Sbjct: 303 IVMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|126452138|ref|YP_001064426.1| histone deacetylase family protein [Burkholderia pseudomallei
1106a]
gi|167822159|ref|ZP_02453630.1| histone deacetylase family protein [Burkholderia pseudomallei 9]
gi|167892242|ref|ZP_02479644.1| histone deacetylase family protein [Burkholderia pseudomallei 7894]
gi|226194620|ref|ZP_03790215.1| histone deacetylase family protein [Burkholderia pseudomallei
Pakistan 9]
gi|242316513|ref|ZP_04815529.1| histone deacetylase family protein [Burkholderia pseudomallei
1106b]
gi|386860228|ref|YP_006273177.1| histone deacetylase family protein [Burkholderia pseudomallei
1026b]
gi|403516797|ref|YP_006650930.1| histone deacetylase family protein [Burkholderia pseudomallei
BPC006]
gi|418537455|ref|ZP_13103095.1| histone deacetylase family protein [Burkholderia pseudomallei
1026a]
gi|126225780|gb|ABN89320.1| histone deacetylase family protein [Burkholderia pseudomallei
1106a]
gi|225933321|gb|EEH29313.1| histone deacetylase family protein [Burkholderia pseudomallei
Pakistan 9]
gi|242139752|gb|EES26154.1| histone deacetylase family protein [Burkholderia pseudomallei
1106b]
gi|385350164|gb|EIF56716.1| histone deacetylase family protein [Burkholderia pseudomallei
1026a]
gi|385657356|gb|AFI64779.1| histone deacetylase family protein [Burkholderia pseudomallei
1026b]
gi|403072441|gb|AFR14021.1| histone deacetylase family protein [Burkholderia pseudomallei
BPC006]
Length = 370
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 174/326 (53%), Gaps = 25/326 (7%)
Query: 39 FDPGFLE---------------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL L +H ++S R+ +L ++ ++ + A
Sbjct: 8 FDPAFLSHRQGDLVYVVPHGTLNLGEHFDSSLRLAYTKQLLDAVGMTERLTRVAFARATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN N+PLP+GTGD GY H
Sbjct: 188 QTFYDDPSVLFVSLHE-----AANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R A GGR
Sbjct: 243 AFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
++++QEGGY + Y LEG++
Sbjct: 303 IVMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|307595004|ref|YP_003901321.1| histone deacetylase [Vulcanisaeta distributa DSM 14429]
gi|307550205|gb|ADN50270.1| Histone deacetylase [Vulcanisaeta distributa DSM 14429]
Length = 348
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 30/304 (9%)
Query: 39 FDPGFLEVL--EKHPENSDRIKNIV------SILKRGPISPYISWHSGIPAQIPQLLSFH 90
+D +LE H EN R+ +I+ +I++R P++ W +L H
Sbjct: 6 YDNAYLEHRPPRNHVENPGRVTSIIKAISDIAIIER-PVNYVDEW----------ILKVH 54
Query: 91 TPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
PDY+ ++ +A G + T ++PG+ AA LAVG L + VL G AYA+VR
Sbjct: 55 DPDYVRQIDKACGMGYVFIDADTYVSPGTCKAARLAVGAVLRGIDKVLGGEWNAAYAVVR 114
Query: 151 PPGHHA----QPTMA--DGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYR 204
PPGHH + MA G+C NN + AL G KV ++D+D H+GNGT E FY
Sbjct: 115 PPGHHVGRGGRALMAPTQGFCVFNNVAIGAVYALKHGISKVAILDVDAHHGNGTQEIFYE 174
Query: 205 SNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
+VL +SLH + + +P G +D++GEGEG G+N+N+PLP T D Y+ A+ ++V
Sbjct: 175 DPRVLYVSLHQDPLT---IYPGTGFIDDVGEGEGEGFNVNVPLPPFTADDAYMKALDKVV 231
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
P I++F P +I++ +G D+ D L+++ Y + R +R + R G ++ V E
Sbjct: 232 WPIIEEFRPQLILVSLGFDAHMLDNIANLRLSLNAYAYVFRRLRDMIGRVKG--VVFVLE 289
Query: 325 GGYH 328
GGY+
Sbjct: 290 GGYN 293
>gi|167569588|ref|ZP_02362462.1| histone deacetylase family, putative [Burkholderia oklahomensis
C6786]
Length = 369
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A LL H Y+ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAARLDMPSAPAATDADLLRIHPAHYLEAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G ++A+ VL A++L RPPGHH G+C N
Sbjct: 98 GELAPFGKGSYEIAALSAGLAIAAVDAVLAERAANAFSLSRPPGHHCLRDKPMGFCLFAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIALEAARAKHRIERVAVIDWDVHHGNGTQAIYYDDPHTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y + +V+PA+ F+P +IV+ G D++A D
Sbjct: 214 GADERGAGAGVGANVNVPLLAGAGDDAYRYTFERIVLPALDAFKPELIVVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
P R L D YR M V+ A R+ GGRL++V EGGY Y +C HA +E +
Sbjct: 274 PLARMQLHSDSYRFMTHAVKEAAQRHCGGRLVVVHEGGYSEAYVPFCGHAIVEAL 328
>gi|115372586|ref|ZP_01459893.1| histone deacetylase/AcuC/AphA family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115370307|gb|EAU69235.1| histone deacetylase/AcuC/AphA family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 587
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 170/318 (53%), Gaps = 25/318 (7%)
Query: 25 MLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIP 84
L HD G+G HPE+ R+++I+S+L R P++ S A
Sbjct: 258 FLQHDPGQG----------------HPESPARLQSILSVLARTPVA-GTQVRSPRSATAA 300
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
+L + HTP+ L+ AG + V D T L+P S+ AALLA G + A++ V+ G +
Sbjct: 301 ELSAVHTPELRQALL--GMAGHRAVIDEDTRLSPDSYDAALLAAGAAVGAVEEVMAGRAR 358
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFY 203
A+ALVRPPGHHA+P A G+C NN +A + G +V+V+D DVH+GNGT F
Sbjct: 359 NAFALVRPPGHHAEPGRAMGFCLFNNVAIAAEAGRRLGAERVLVLDWDVHHGNGTQAAFE 418
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
VL S+H P +P G E+G+G G G+++N LP G D Y +L
Sbjct: 419 GRRDVLYQSVHQY-----PYYPGTGAPREVGQGAGEGFSVNCALPGGATDSDYRSIFEDL 473
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
++P F+P ++++ G D DP G +T G+ M +RSLA+R GG+L++V
Sbjct: 474 LLPIADSFQPQLMLVSAGFDPHRNDPLGGMLVTERGFAAMCAGLRSLAERLCGGKLVLVL 533
Query: 324 EGGYHVTYSAYCLHATLE 341
EGGY + + +HA +E
Sbjct: 534 EGGYSLEGLSQSVHACIE 551
>gi|402566270|ref|YP_006615615.1| histone deacetylase family protein [Burkholderia cepacia GG4]
gi|402247467|gb|AFQ47921.1| histone deacetylase family protein [Burkholderia cepacia GG4]
Length = 371
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 159/307 (51%), Gaps = 6/307 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S+++ ++ + PA LL H Y++ A G +
Sbjct: 40 YAESPDSKRRLLSLVQASGLAAQLDMRGAAPATTGDLLRIHPASYLDAFRALSDANGGDL 99
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D GS+ A L+ G ++A+ V+ A++L RPPGHH G+C L N
Sbjct: 100 GDLAPFGKGSYEIAALSAGLAIAAVDAVVTERAANAFSLSRPPGHHCLRDRPMGFCLLAN 159
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A G +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 160 IPIAIEAARAQHGIDRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCF----PPGYS 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+ GEG G G NLN+PL G+GD Y +A +V+PA+++F P +I++ G D+SA D
Sbjct: 216 GGGDRGEGAGVGANLNVPLLAGSGDDAYRYAFERIVLPALEQFRPELIIVASGLDASAVD 275
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R L D YR M R V+ A R+ GGRL+IV EGGY Y +C A +E + L
Sbjct: 276 PLARMQLHTDSYRFMTRAVKKAAQRHCGGRLVIVHEGGYSEAYVPFCGLAIVEELAGLRT 335
Query: 349 ALLSDPI 355
++DP+
Sbjct: 336 E-VADPM 341
>gi|298529624|ref|ZP_07017027.1| Histone deacetylase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511060|gb|EFI34963.1| Histone deacetylase [Desulfonatronospira thiodismutans ASO3-1]
Length = 315
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 151/283 (53%), Gaps = 9/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPEN R+ IVS L+ + + W S PA+ L H Y+ +LV A G+
Sbjct: 21 HPENPARLDAIVSALQNEDQNSELVWQSPEPAREEDLFGNHEAGYV-DLVRDSVAAGRHS 79
Query: 110 CD--GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T ++ GSW AAL A G ++A+ V++G A+ VRPPGHHA+P M G+C
Sbjct: 80 LGYPDTGISNGSWDAALTAAGGLINAVDLVMEGKAANAFCPVRPPGHHARPGMGMGFCLF 139
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN LA + A+ G +++VID DVH+GNGT E FY+ +V S H +W P
Sbjct: 140 NNVALAARHAMKKYGLDRILVIDWDVHHGNGTQEAFYQEQEVFFFSTHQE--AW---FPF 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G+G G N+N P G G + A T +VP + +++P ++++ G D+
Sbjct: 195 TGERHETGSGKGRGTNMNFPFSAGAGRDEILPAFTGHLVPTMDEYKPQLVLVSAGFDAMQ 254
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
D GR LT D + + I +A +++ GRL+ EGGY++
Sbjct: 255 GDLLGRFNLTEDDFARLTEIAMEIAGKHASGRLVSTLEGGYNL 297
>gi|163845938|ref|YP_001633982.1| histone deacetylase superfamily protein [Chloroflexus aurantiacus
J-10-fl]
gi|222523663|ref|YP_002568133.1| histone deacetylase superfamily protein [Chloroflexus sp. Y-400-fl]
gi|163667227|gb|ABY33593.1| histone deacetylase superfamily [Chloroflexus aurantiacus J-10-fl]
gi|222447542|gb|ACM51808.1| histone deacetylase superfamily [Chloroflexus sp. Y-400-fl]
Length = 352
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 172/343 (50%), Gaps = 12/343 (3%)
Query: 36 DTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
D FD L H E ++R+ I ++ + P + PA +LL+ H+ +
Sbjct: 8 DQRFD---LHTWHGHVEQAERLHAIRRAIEVDGLWPRLLQLPIRPATEAELLAVHSSSML 64
Query: 96 NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
+ + + GG + T + SW ALLA G T+ + ++ G A+ALVRPPGHH
Sbjct: 65 HRVRQLASYGGGQIDSDTYVTAESWDVALLAAGATICMAEALVSGRCHNAFALVRPPGHH 124
Query: 156 AQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A + G+C NN +A ++ L+ ++ ++D DVH+GNGT + FYR +VL S+H
Sbjct: 125 ATDIRSMGFCLFNNIAVAARVLLDRHHLRRIAIVDFDVHHGNGTQDIFYRDGRVLFCSIH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGE-GFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
P +P G++ E+G+ G LN+PLP GTGD GY ++ P +++F+P
Sbjct: 185 A-----APLYPGTGSLHEMGDPRTAGGTTLNVPLPYGTGDHGYEQVFQRVIGPVLRRFQP 239
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+I++ G D+ DP G L++ G+ + + + AD GR+ V EGGY + A
Sbjct: 240 EIILVSAGFDAHWSDPIGPMALSIQGFARIVQHLCDWADELCDGRIGFVLEGGYSLPALA 299
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
+ TL +L +P SDP+ E +I S+ Y
Sbjct: 300 AGVVTTLRLLLGMPAG--SDPMGKMNAPEPAIEHIITSLYTYH 340
>gi|54024007|ref|YP_118249.1| acetylpolyamine aminohydrolase [Nocardia farcinica IFM 10152]
gi|54015515|dbj|BAD56885.1| putative acetylpolyamine aminohydrolase [Nocardia farcinica IFM
10152]
Length = 372
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 128/220 (58%), Gaps = 5/220 (2%)
Query: 123 ALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-G 181
ALLA G + A++ V DG AYAL+ PPGHHA+ G+C NN +A AL G
Sbjct: 113 ALLAAGGAIEAVRAVADGTVTNAYALINPPGHHAERATGRGFCLFNNGAIAAAYALEVLG 172
Query: 182 CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGY 241
+V ++D DVH+GNG + F S +VL IS+H + PS +G DE G G GFGY
Sbjct: 173 MQRVAIVDWDVHHGNGAQDIFRESARVLNISVHQDR--CFPS--DSGFRDERGSGAGFGY 228
Query: 242 NLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYR 301
+NIPLP G G Y +A +V+PA++ + P +I++ G D+S DP R L DG+R
Sbjct: 229 TINIPLPPGGGSGAYDYAFDTVVLPALRAYRPELIIVASGFDASMMDPLARMMLRSDGFR 288
Query: 302 EMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+ R + +AD +GGRL +QEGGY Y +C A +E
Sbjct: 289 SLTRKMLDVADEVAGGRLACLQEGGYSPYYVPFCGLAVVE 328
>gi|126439946|ref|YP_001057180.1| histone deacetylase [Burkholderia pseudomallei 668]
gi|167736541|ref|ZP_02409315.1| histone deacetylase family, putative [Burkholderia pseudomallei 14]
gi|167900740|ref|ZP_02487945.1| histone deacetylase family, putative [Burkholderia pseudomallei
NCTC 13177]
gi|167908966|ref|ZP_02496057.1| histone deacetylase family, putative [Burkholderia pseudomallei
112]
gi|217425028|ref|ZP_03456524.1| histone deacetylase family protein [Burkholderia pseudomallei 576]
gi|254182268|ref|ZP_04888865.1| histone deacetylase family protein [Burkholderia pseudomallei 1655]
gi|254197107|ref|ZP_04903530.1| histone deacetylase family protein [Burkholderia pseudomallei S13]
gi|254260672|ref|ZP_04951726.1| histone deacetylase family protein [Burkholderia pseudomallei
1710a]
gi|254295691|ref|ZP_04963148.1| histone deacetylase family protein [Burkholderia pseudomallei 406e]
gi|418398120|ref|ZP_12971724.1| histone deacetylase family protein [Burkholderia pseudomallei 354a]
gi|418558106|ref|ZP_13122674.1| histone deacetylase family protein [Burkholderia pseudomallei 354e]
gi|126219439|gb|ABN82945.1| histone deacetylase family [Burkholderia pseudomallei 668]
gi|157805668|gb|EDO82838.1| histone deacetylase family protein [Burkholderia pseudomallei 406e]
gi|169653849|gb|EDS86542.1| histone deacetylase family protein [Burkholderia pseudomallei S13]
gi|184212806|gb|EDU09849.1| histone deacetylase family protein [Burkholderia pseudomallei 1655]
gi|217392048|gb|EEC32074.1| histone deacetylase family protein [Burkholderia pseudomallei 576]
gi|254219361|gb|EET08745.1| histone deacetylase family protein [Burkholderia pseudomallei
1710a]
gi|385363509|gb|EIF69282.1| histone deacetylase family protein [Burkholderia pseudomallei 354e]
gi|385366921|gb|EIF72513.1| histone deacetylase family protein [Burkholderia pseudomallei 354a]
Length = 370
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 173/326 (53%), Gaps = 25/326 (7%)
Query: 39 FDPGFLE---------------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL L +H ++ R+ +L ++ ++ + A
Sbjct: 8 FDPAFLSHRQGDLVYVVPHGTLNLGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN N+PLP+GTGD GY H
Sbjct: 188 QAFYDDPSVLFVSLHE-----AANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R A GGR
Sbjct: 243 AFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
++++QEGGY + Y LEG++
Sbjct: 303 IVMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|337287997|ref|YP_004627469.1| histone deacetylase superfamily [Thermodesulfobacterium sp. OPB45]
gi|334901735|gb|AEH22541.1| histone deacetylase superfamily [Thermodesulfobacterium geofontis
OPF15]
Length = 350
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 174/331 (52%), Gaps = 17/331 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ R++ I L++ I+PYI A ++L H+ +Y+ L+E K
Sbjct: 21 HPESPQRLQAIWERLQKEDIAPYIEVFPPDIATKEEILWNHS-EYLYNLIEHTKGKPYTQ 79
Query: 110 CD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T N S+ AAL AVG +A+K + + + +ALVRPPGHHA+ A G+C N
Sbjct: 80 LDPDTATNEYSFFAALKAVGAQKTALKLLFEEGYRGTFALVRPPGHHAEKDRAMGFCLFN 139
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A A N G K++++D D+H+GNGT + FY +VL S+H P +P
Sbjct: 140 NVAIAAYYAKNYYGLKKILIVDWDLHHGNGTQKSFYSDPEVLYFSVHQY-----PYYPGT 194
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E+GEG+G G+ LN+PLP GD Y++ E + P +FEP +I++ G D
Sbjct: 195 GHYSEIGEGKGIGFTLNVPLPAYCGDEEYIYIFKEFLGPIALQFEPEIIMVSAGFDLCEG 254
Query: 288 DPNGRQCLTMD-GYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEGV 343
DP G +T G + I++++A++ GR+L EGGY ++ S L T G+
Sbjct: 255 DPLGNMEVTPHFGIPMLTLILKNIAEKTCQGRILFTLEGGYNAVNLQESVANLILTFLGL 314
Query: 344 LNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+LP + I + E K+++ +K+
Sbjct: 315 KDLP-----EKITFSERAERIEAKILKPLKE 340
>gi|354609341|ref|ZP_09027297.1| histone deacetylase superfamily [Halobacterium sp. DL1]
gi|353194161|gb|EHB59663.1| histone deacetylase superfamily [Halobacterium sp. DL1]
Length = 338
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 165/329 (50%), Gaps = 33/329 (10%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGI 79
+D+ L+HD G +HPE+ DR+ I KRG + +++
Sbjct: 5 FDETCLDHDPGA----------------RHPESPDRLVAI----KRGLAKCHGVTYEGAA 44
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA + H Y+ E+ +GG T+ P +W AAL + G ++ A++ L+
Sbjct: 45 PATEADATAVHDAGYVEEIQSFCASGGGNWDPDTIACPETWPAALASAGLSMDAVRAALN 104
Query: 140 GHG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGN 196
G +AL RPPGHHA A G+CFLNNA +A Q AL+ G +V + D DVH+GN
Sbjct: 105 GADGRNTPFALGRPPGHHAVEGDAMGFCFLNNAAIAAQYALDDLGAERVAIFDWDVHHGN 164
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY S V S+H +P G DE GEGEG G LN+P P G GD Y
Sbjct: 165 GTQDIFYDSGDVFYASIHEE-----GLYPGTGDADERGEGEGAGTTLNVPFPRGFGDAEY 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
A+ EL+ PA+ +F+P++ V+ G D+ DP R ++ +GY + VR +A +
Sbjct: 220 CAAVEELLAPALAEFDPDLFVVSAGFDAHRHDPISRMHVSDEGYALLTDRVRDIAAE-TD 278
Query: 317 GRLLIVQEGGYHVTYSAY---CLHATLEG 342
L V EGGY + A +H T +G
Sbjct: 279 AALAFVLEGGYSLDALADGIGMVHETFDG 307
>gi|114321197|ref|YP_742880.1| histone deacetylase superfamily protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227591|gb|ABI57390.1| histone deacetylase superfamily [Alkalilimnicola ehrlichii MLHE-1]
Length = 365
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 165/301 (54%), Gaps = 12/301 (3%)
Query: 44 LEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADK 103
L + +PE+ R+ I+ +L R P+ P +++ +G A +L HT Y+ +
Sbjct: 42 LTIQWNYPEHPGRLTAIMDLLVREPV-PGVTFRTGRAATPAELGRVHTLSYLETIYALRG 100
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ D T + PGS AA +A GT ++A++ V+ G + A+ALVRPPGHHA+ A G
Sbjct: 101 KHAWLDVDTTAVCPGSVDAAEVAAGTAIAAVEAVVQGDAEAAFALVRPPGHHAEAVRARG 160
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C NN +A A + GC +V+++D DVH+GNGT + F VL H P
Sbjct: 161 FCLFNNVAVAAAHAQAALGCQRVLIVDWDVHHGNGTQDIFRADPDVLFFDTHRA----SP 216
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P +G ++E+G G G G +N+PLP G GD + A E++VPA F+P+++++ G
Sbjct: 217 FYPGSGRLEEVGHGLGEGTTVNVPLPPGAGDAALLRAFHEILVPAADWFQPDLVLVSAGF 276
Query: 283 DSSAFDPNGRQCLTM--DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
D D Q L M +G+ + +++ +A R++ GRL V EGGY++ + + L
Sbjct: 277 DPHRLD----QALNMSYEGFAALTAVLQEIATRHAQGRLAFVLEGGYNLEALSRGVRTVL 332
Query: 341 E 341
E
Sbjct: 333 E 333
>gi|76810001|ref|YP_331748.1| histone deacetylase family protein [Burkholderia pseudomallei
1710b]
gi|76579454|gb|ABA48929.1| histone deacetylase family protein [Burkholderia pseudomallei
1710b]
Length = 350
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 168/303 (55%), Gaps = 10/303 (3%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L +H ++ R+ +L ++ ++ + A QLL H P+Y+ +L EA G
Sbjct: 11 LGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATDEQLLRVHRPEYLRQLAEACAVAG 70
Query: 107 KMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ V D + + A LA G +A+ V+ G + AYAL+RP GHHA A G
Sbjct: 71 EQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTGPLRQAYALIRPSGHHAGADFAMG 130
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
YC+ NN +A + A + G +V ++D DVH+GNGT + FY VL +SLH
Sbjct: 131 YCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQQAFYDDPSVLFVSLHE-----AA 185
Query: 223 SHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
+ P +G E G G G GYN N+PLP+GTGD GY HA ELV+P ++ F P +I++ G
Sbjct: 186 NFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRHAFDELVLPLVEAFAPQLILVSAG 245
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
QD++AFDP GR + DG+R M R +R A GGR++++QEGGY + Y LE
Sbjct: 246 QDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGRIVMLQEGGYSLPYLPIATLGVLE 305
Query: 342 GVL 344
G++
Sbjct: 306 GLV 308
>gi|67642439|ref|ZP_00441195.1| histone deacetylase family protein [Burkholderia mallei GB8 horse
4]
gi|121598434|ref|YP_994121.1| histone deacetylase family protein [Burkholderia mallei SAVP1]
gi|124384272|ref|YP_001028222.1| histone deacetylase [Burkholderia mallei NCTC 10229]
gi|126448157|ref|YP_001081837.1| histone deacetylase/AcuC/AphA family protein [Burkholderia mallei
NCTC 10247]
gi|126450147|ref|YP_001081860.1| histone deacetylase [Burkholderia mallei NCTC 10247]
gi|167001154|ref|ZP_02266953.1| histone deacetylase family protein [Burkholderia mallei PRL-20]
gi|167851709|ref|ZP_02477217.1| histone deacetylase family protein [Burkholderia pseudomallei
B7210]
gi|254177082|ref|ZP_04883739.1| histone deacetylase family protein [Burkholderia mallei ATCC 10399]
gi|254188233|ref|ZP_04894745.1| histone deacetylase family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254203646|ref|ZP_04910006.1| histone deacetylase family protein [Burkholderia mallei FMH]
gi|254208621|ref|ZP_04914969.1| histone deacetylase family protein [Burkholderia mallei JHU]
gi|254360323|ref|ZP_04976593.1| histone deacetylase family protein [Burkholderia mallei 2002721280]
gi|418539596|ref|ZP_13105185.1| histone deacetylase family protein [Burkholderia pseudomallei
1258a]
gi|418545756|ref|ZP_13111001.1| histone deacetylase family protein [Burkholderia pseudomallei
1258b]
gi|121227244|gb|ABM49762.1| histone deacetylase family protein [Burkholderia mallei SAVP1]
gi|124292292|gb|ABN01561.1| histone deacetylase family protein [Burkholderia mallei NCTC 10229]
gi|126241027|gb|ABO04120.1| histone deacetylase/AcuC/AphA family protein [Burkholderia mallei
NCTC 10247]
gi|126243017|gb|ABO06110.1| histone deacetylase family protein [Burkholderia mallei NCTC 10247]
gi|147745158|gb|EDK52238.1| histone deacetylase family protein [Burkholderia mallei FMH]
gi|147750497|gb|EDK57566.1| histone deacetylase family protein [Burkholderia mallei JHU]
gi|148029563|gb|EDK87468.1| histone deacetylase family protein [Burkholderia mallei 2002721280]
gi|157935913|gb|EDO91583.1| histone deacetylase family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|160698123|gb|EDP88093.1| histone deacetylase family protein [Burkholderia mallei ATCC 10399]
gi|238523589|gb|EEP87026.1| histone deacetylase family protein [Burkholderia mallei GB8 horse
4]
gi|243062986|gb|EES45172.1| histone deacetylase family protein [Burkholderia mallei PRL-20]
gi|385364258|gb|EIF69982.1| histone deacetylase family protein [Burkholderia pseudomallei
1258a]
gi|385366275|gb|EIF71904.1| histone deacetylase family protein [Burkholderia pseudomallei
1258b]
Length = 370
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 172/326 (52%), Gaps = 25/326 (7%)
Query: 39 FDPGFLE---------------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL L +H ++ R+ +L ++ ++ + A
Sbjct: 8 FDPAFLSHRQGDLVYVVPHGTLNLGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRRLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN N+PLP+GTGD GY H
Sbjct: 188 QAFYDDPSVLFVSLHE-----AANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R A GGR
Sbjct: 243 AFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
++++QEGGY + Y LEG++
Sbjct: 303 IVMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|167916998|ref|ZP_02504089.1| histone deacetylase family, putative [Burkholderia pseudomallei
BCC215]
Length = 370
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 173/326 (53%), Gaps = 25/326 (7%)
Query: 39 FDPGFLE---------------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL L +H ++ R+ +L ++ ++ + A
Sbjct: 8 FDPAFLSHRQGDLVYVVPHGTLNLGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN N+PLP+GTGD GY H
Sbjct: 188 QTFYDDPSVLFVSLHE-----AANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R A GGR
Sbjct: 243 AFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGR 302
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
++++QEGGY + Y LEG++
Sbjct: 303 IVMLQEGGYSLPYLPIATLGVLEGLV 328
>gi|449461867|ref|XP_004148663.1| PREDICTED: histone deacetylase 14-like [Cucumis sativus]
Length = 442
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 181/376 (48%), Gaps = 33/376 (8%)
Query: 22 DDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP------YISW 75
D + N+D K ++ G + E HPE+ R+ I + L+ ++P I
Sbjct: 73 DSPLANYDNVKIVYSIAAATGHNK--ESHPESHLRVPAIANALEDMELTPKFLGSNVIQL 130
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGS---------WGAALLA 126
+ PA + ++S H+ Y+ L +KA + DG +L GS + +L+A
Sbjct: 131 ENYKPASVDDIVSVHSKSYVAGL---EKAMDRASRDGLILIEGSGPTYATATTFNESLVA 187
Query: 127 VGTTLSAMKHVLDGHGK-----IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-S 180
G +S + V+ I +AL+RPPGHHA P G+C N +A + A
Sbjct: 188 AGAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAARYAQRVH 247
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG 240
G +V +ID D H+GNGT++ FY + + +S H + S+P G +DE+G G+G G
Sbjct: 248 GLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDG-----SYPGTGKIDEVGCGDGEG 302
Query: 241 YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY 300
LNIPLP G+GD E++VP Q+F+P++I++ G D+ DP T Y
Sbjct: 303 TTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTY 362
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP--LALLSDPIAYY 358
+ ++ LA GGR + EGGY++ +Y + + L+ P + +P Y
Sbjct: 363 YMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVADSFRAFLDEPSMASEFDNPAILY 422
Query: 359 PEDEAFPVKVIESIKQ 374
E +VI+ +KQ
Sbjct: 423 EEPSRKFKQVIQKVKQ 438
>gi|53724658|ref|YP_101966.1| histone deacetylase family protein [Burkholderia mallei ATCC 23344]
gi|52428081|gb|AAU48674.1| histone deacetylase family protein [Burkholderia mallei ATCC 23344]
Length = 350
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 167/303 (55%), Gaps = 10/303 (3%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L +H ++ R+ +L ++ ++ + A QLL H P+Y+ L EA G
Sbjct: 11 LGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATDEQLLRVHRPEYLRRLAEACAVAG 70
Query: 107 KMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ V D + + A LA G +A+ V+ G + AYAL+RP GHHA A G
Sbjct: 71 EQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTGPLRQAYALIRPSGHHAGADFAMG 130
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
YC+ NN +A + A + G +V ++D DVH+GNGT + FY VL +SLH
Sbjct: 131 YCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQQAFYDDPSVLFVSLHE-----AA 185
Query: 223 SHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
+ P +G E G G G GYN N+PLP+GTGD GY HA ELV+P ++ F P +I++ G
Sbjct: 186 NFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRHAFDELVLPLVEAFAPQLILVSAG 245
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
QD++AFDP GR + DG+R M R +R A GGR++++QEGGY + Y LE
Sbjct: 246 QDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGRIVMLQEGGYSLPYLPIATLGVLE 305
Query: 342 GVL 344
G++
Sbjct: 306 GLV 308
>gi|449507477|ref|XP_004163043.1| PREDICTED: histone deacetylase 14-like [Cucumis sativus]
Length = 442
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 181/376 (48%), Gaps = 33/376 (8%)
Query: 22 DDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP------YISW 75
D + N+D K ++ G + E HPE+ R+ I + L+ ++P I
Sbjct: 73 DSPLANYDNVKIVYSIAAATGHNK--ESHPESHLRVPAIANALEDMELTPKFLGSNVIQL 130
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGS---------WGAALLA 126
+ PA + ++S H+ Y+ L +KA + DG +L GS + +L+A
Sbjct: 131 ENYKPASVDDIVSVHSKSYVAGL---EKAMDRASRDGLILIEGSGPTYATATTFNESLVA 187
Query: 127 VGTTLSAMKHVLDGHGK-----IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-S 180
G +S + V+ I +AL+RPPGHHA P G+C N +A + A
Sbjct: 188 AGAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGNVAIAARYAQRVH 247
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFG 240
G +V +ID D H+GNGT++ FY + + +S H + S+P G +DE+G G+G G
Sbjct: 248 GLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDG-----SYPGTGKIDEVGCGDGEG 302
Query: 241 YNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY 300
LNIPLP G+GD E++VP Q+F+P++I++ G D+ DP T Y
Sbjct: 303 TTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTGTY 362
Query: 301 REMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP--LALLSDPIAYY 358
+ ++ LA GGR + EGGY++ +Y + + L+ P + +P Y
Sbjct: 363 YMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVADSFRAFLDEPSMASEFDNPAILY 422
Query: 359 PEDEAFPVKVIESIKQ 374
E +VI+ +KQ
Sbjct: 423 EEPSRKFKQVIQKVKQ 438
>gi|301102851|ref|XP_002900512.1| histone deacetylase, putative [Phytophthora infestans T30-4]
gi|262101775|gb|EEY59827.1| histone deacetylase, putative [Phytophthora infestans T30-4]
Length = 370
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 162/302 (53%), Gaps = 15/302 (4%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--VEADKAGGKM 108
PE R +++++ G + ++ I I QL HT Y+ EL + A + GG
Sbjct: 34 PETKRRFHSLLAV--SGLLDQLVTIRPQIATMI-QLERVHTRRYLEELEQLSAREEGGN- 89
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + ++ A L+ G L+A+ V++G AYAL RPPGHHA G+C LN
Sbjct: 90 AGEEAPFSQLAFDIARLSAGGVLAAVDAVMEGRVDTAYALTRPPGHHAVADRGMGFCLLN 149
Query: 169 NAGLAVQLAL---NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
N + + L +S K+ ++D DVH+GNGT E FY ++VL +SLH + ++P
Sbjct: 150 NVAITAKHLLETYSSQIKKIAIVDYDVHHGNGTQEAFYDDDRVLFVSLHQAN-----NYP 204
Query: 226 QN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
+ G + E GE +G G+ +N+PLP G+G Y +A +V+P+++ F+P+ +++ G D+
Sbjct: 205 ADTGKITERGEDKGLGFTVNVPLPPGSGSGAYEYAFRNVVIPSLESFKPDFVLVSSGFDA 264
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
S DP L+ +R M V +A R GR++ EGGY TY +C A +E +L
Sbjct: 265 SYADPLAAMILSSSVFRFMAHEVVDVAKRICAGRIVFAHEGGYSETYVPFCGAAVIEELL 324
Query: 345 NL 346
+
Sbjct: 325 GI 326
>gi|167644523|ref|YP_001682186.1| histone deacetylase superfamily protein [Caulobacter sp. K31]
gi|167346953|gb|ABZ69688.1| histone deacetylase superfamily [Caulobacter sp. K31]
Length = 379
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 160/298 (53%), Gaps = 19/298 (6%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSF---HTPDYINEL--VEADKAG 105
PE R +N+V + S + IPA++ L HT D+IN++ + G
Sbjct: 40 PEVVRRFRNLVDV------SGLLKKLVDIPARLATGLEIGRVHTSDHINQIKIMSGFPTG 93
Query: 106 GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
G+ D V G++ A LA G ++A+ V+ G AYAL+RP GHH++P + G+C
Sbjct: 94 GEPGDDAPVPY-GAFEIASLAAGGAIAAVDAVMSGEVDNAYALLRPAGHHSRPDRSMGFC 152
Query: 166 FLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
+NA +A + L+ ++ +D DVH+GNGT Y + LTIS+H + +
Sbjct: 153 IFSNAAIAGRHLLDFHNVKRIAYVDWDVHHGNGTQAALYNEPRALTISIHQDR-----LY 207
Query: 225 P-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
P +G VD++GEG G NLNIPLP G G Y A +V+PA+Q F P +I++ G D
Sbjct: 208 PVDDGFVDQIGEGAAEGTNLNIPLPPGCGAEAYCAAYDRVVIPALQAFRPEIIIVPSGFD 267
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+ A DP GR + DGYR++ R + + AD GGRL+ + EGGY Y A LE
Sbjct: 268 AGAMDPMGRMMMHSDGYRQLTRKLMATADELCGGRLVFLHEGGYSRWTVPYFGLAVLE 325
>gi|385653531|ref|ZP_10048084.1| histone deacetylase superfamily protein [Leucobacter
chromiiresistens JG 31]
Length = 377
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 189/370 (51%), Gaps = 30/370 (8%)
Query: 21 WDDGMLNHDTGK--GLFDTGFDPGFLEVLE--KHPENSDRIKNIVSILKRGPISPYISWH 76
W + HDTG G++ +G GF++ + PE+ R+ +V + G + +
Sbjct: 9 WHERYAWHDTGTHAGIYPSG---GFVQPYRNFESPESKARLAGLVEV--SGLLDSLVR-- 61
Query: 77 SGIPAQ---IPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLS 132
IPA+ LL HT +++ + E + G DG + G + A LA G TL+
Sbjct: 62 --IPAREVSAEDLLRVHTAEHVERIREQSEHAGGDAGDGFSPFGRGGYDLARLAAGGTLA 119
Query: 133 AMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDID 191
A + VLDG AYALVRPPGHHA+P GYC N +A++ +G +V + D D
Sbjct: 120 AAEAVLDGVVDNAYALVRPPGHHAEPDQGRGYCLFANIPVAIEALRAAGRVRRVAIFDYD 179
Query: 192 VHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNG 250
VH+GNG + ++ VLTIS+H + P +G VDE G G G G N+N+PLP G
Sbjct: 180 VHHGNGAQKIYWDDPDVLTISVHQDR-----LFPVDSGLVDEQGAGAGAGTNINVPLPAG 234
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
+GD Y + E+ PAI F P++I++ G D SA DP GR +T +G+R + + +
Sbjct: 235 SGDGAYWSTVDEVARPAITAFAPDLILVSSGFDPSALDPLGRMSVTSEGFRGIAERLLDI 294
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIE 370
AD GR++ EGGY + +C A LE + + + DP A D P +
Sbjct: 295 ADEACDGRIVFSHEGGYSAVHVPFCGVAVLEALSGVRTG-VEDPFALSIGDS--PTR--- 348
Query: 371 SIKQYQNDVI 380
+ +Q DVI
Sbjct: 349 ELTDWQTDVI 358
>gi|88602220|ref|YP_502398.1| histone deacetylase superfamily protein [Methanospirillum hungatei
JF-1]
gi|88187682|gb|ABD40679.1| histone deacetylase superfamily [Methanospirillum hungatei JF-1]
Length = 364
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 185/362 (51%), Gaps = 25/362 (6%)
Query: 39 FDPGFL--EVLEKHPENSDRIKNIVSILKRGPIS--PYISWHSGIPAQIPQLLSFHTPDY 94
+ P +L E HPE +R+ + L+ I P I + PA +L HT +Y
Sbjct: 7 YAPSYLTHEQSSSHPERRERLSYTLDQLEEEGIFDLPQIRLLTPKPAMRDDVLLVHTKEY 66
Query: 95 INELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
++ L EA G + D T + G ALLA G ++ VL+ + ++ L RPPGH
Sbjct: 67 LHFLEEASVNGAIIDAD-TYVPKGLIHDALLAAGGAITGADAVLNQEVRNSFVLSRPPGH 125
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA + G+C+LNN + V+ G +++V+D D H+GNGT E FY VL S+H
Sbjct: 126 HAGRSHGAGFCYLNNVAIMVRYLQRRGLRRIMVLDWDAHHGNGTEEIFYDDPSVLFCSVH 185
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
P +P +G +++G G+G GYN+N+P+P G+ D+ Y + + E+++P ++ P+
Sbjct: 186 QY-----PFYPGSGRFEDIGIGDGKGYNINLPIPAGSSDKVYRYLLEEIILPLADEYMPD 240
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT---- 330
I + GQD+ DP LT GY + + + LAD GR++ V EGGY V
Sbjct: 241 AIAISAGQDNHFTDPLTGLALTAQGYARLMQEMCILADSICYGRIIAVLEGGYSVEGGLP 300
Query: 331 YSAYCLHATLEGVLNLPLALLSDPIAYYP------EDEAFP--VKVIESIKQYQNDVIPF 382
Y+ L A + G L ++ + +P Y DEAFP +K++ +K+ D F
Sbjct: 301 YTNLGLIAAMAG---LDISAIREPEIYREVLEKAVSDEAFPIVIKMVTDLKKKLADHWYF 357
Query: 383 LK 384
++
Sbjct: 358 IR 359
>gi|337287253|ref|YP_004626726.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
gi|335360081|gb|AEH45762.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
Length = 347
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 178/337 (52%), Gaps = 9/337 (2%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
E HPE +R++ I S L++ I+ + A +L H+P+Y+ + + +
Sbjct: 18 EYHPERPERLEKIYSRLEKPDINNLYKILAPREATFEELTWNHSPEYVKTVQQTSGQSVQ 77
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ D T +P S+ AA+ AVG + + K +ALVRPPGHHA+ A G+C
Sbjct: 78 LDAD-TATSPESYEAAIKAVGAQFVGLDAIFSDQAKQVFALVRPPGHHAEYDRAMGFCLF 136
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN LA AL G +++++D D+H+GNGT + FY +VL S H P +P
Sbjct: 137 NNVALAAHYALKKLGLKRILIVDWDLHHGNGTQKSFYHHREVLFFSSHQY-----PYYPG 191
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
GTV+E+GEGEG G+ +N+PLP G GD Y ++++P ++F+P ++++ G D
Sbjct: 192 TGTVEEIGEGEGKGFTVNVPLPAGCGDLEYATVYRQILLPIAERFKPELVLVSAGFDIYF 251
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP G +T G + R+V+ +AD++ GRLL+ EGGY + A L A L +
Sbjct: 252 GDPLGGMQVTPIGVAYLARLVKQIADKHCNGRLLLTLEGGYSLQGLADSLAAVLFELAGR 311
Query: 347 PLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFL 383
L + +D + E + P +V+ +K D P L
Sbjct: 312 SL-IPTDKLEEMEEKDREP-EVLNYVKAVHKDFWPEL 346
>gi|298675423|ref|YP_003727173.1| histone deacetylase superfamily protein [Methanohalobium
evestigatum Z-7303]
gi|298288411|gb|ADI74377.1| histone deacetylase superfamily [Methanohalobium evestigatum
Z-7303]
Length = 337
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+S R+ + V L++ + A+I Q+ + HTPDYI + VE +
Sbjct: 18 HPESSIRLSHAVEYLEKQDVFKNHPLVEPNTAEISQIQTIHTPDYIKK-VEYHCNNEIPL 76
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
TV++ S+ AALLA G ++ A+ + A+ALVRPPGHHA+ A G+C NN
Sbjct: 77 DPDTVVSKDSYRAALLAAGGSIRAVNETYTNNS--AFALVRPPGHHAESDRAKGFCLFNN 134
Query: 170 AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+A + A + G +V++ID DVH+GNGT FY + V+ +S H P P G
Sbjct: 135 IAIAAKYAQSQGMKRVLIIDWDVHHGNGTQHSFYSDSTVMYMSTHRY-----PWFPGTGW 189
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
+DE G GEG GYN+N+PL G+ D Y + ++ +P +F+P++I++ G D+ D
Sbjct: 190 MDETGSGEGEGYNINVPLFAGSTDDEYAYVFDKIFMPVALQFQPDIIMVSAGMDAQENDM 249
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
G LT +G+ + ++ +AD + + ++V EGGY A ++ + + + P
Sbjct: 250 LGGMKLTSEGFATLAGYIKRIAD-LTCKQFILVLEGGYQHEKLAESIYQVITAINSEP 306
>gi|383765981|ref|YP_005444962.1| putative deacetylase [Phycisphaera mikurensis NBRC 102666]
gi|381386249|dbj|BAM03065.1| putative deacetylase [Phycisphaera mikurensis NBRC 102666]
Length = 315
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 156/312 (50%), Gaps = 23/312 (7%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ +DD +L HDTG HPE DR++ ++ L+ ++
Sbjct: 5 LIYDDRLLLHDTGP----------------THPERPDRLRAVMDRLRADGLAQRTESLYF 48
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDG--TVLNPGSWGAALLAVGTTLSAMKH 136
A +L HTP Y++ L +A AGG+ + D + + S A LA+G L +
Sbjct: 49 ATAGRHRLGRLHTPAYLDRL-DAACAGGEPIIDDIDSCIGRVSADVARLALGGILRVTEA 107
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQL-ALNSGCGKVVVIDIDVHYG 195
V G A+ RPPGHHA+ + GYC NA A L + G +V V+D DVH+G
Sbjct: 108 VGRGELNNAFCATRPPGHHAEADRSMGYCLYANAAFAADLLTTDLGLDRVAVVDFDVHHG 167
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGT VL +S+H N +P G E GEG G G +N+ +P G GD
Sbjct: 168 NGTQHLMAGRGDVLALSIHGNPAVL---YPGTGFEHETGEGSGEGATVNVCMPPGAGDAD 224
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y+HA E V+PA++ F P +VL G D+S DP +T DG+R+M R++ ADR
Sbjct: 225 YLHAFRERVIPALEAFRPEALVLAAGFDASVRDPLAPMRVTDDGFRQMTRLLLDAADRLC 284
Query: 316 GGRLLIVQEGGY 327
GG+++ + EGGY
Sbjct: 285 GGKVVSILEGGY 296
>gi|399155825|ref|ZP_10755892.1| histone deacetylase superfamily protein [SAR324 cluster bacterium
SCGC AAA001-C10]
Length = 363
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 173/338 (51%), Gaps = 11/338 (3%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
K PE+S R++ ++ L + + + +LS HT Y++++++ K K
Sbjct: 18 KSPESSIRLEKLIEYLNKSEVIDSLEKIKLETIPWEWILSSHTKYYVDKVIKFSKDQKKR 77
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T L P + A L +++ K VL+G K A++L+RP GHHA T A GYC N
Sbjct: 78 ISVDTYLTPFAADLARLGASGAVASTKSVLEGKVKNAFSLMRPVGHHAHSTHAMGYCIFN 137
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A A+ ++++ID+D H+GNGT + FY S++VL +S H + P P
Sbjct: 138 NVAIAANYAMREHKLDRIMIIDLDAHHGNGTEQIFYASDEVLFVSFHQH-----PWFPGT 192
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G + G G GYN NI +P + ++ Y+ +E+VVP +K++P I++ +G D+
Sbjct: 193 GDWFKSGTEAGLGYNYNIEMPTWSDNKSYMQGFSEIVVPLAEKYKPQFILVSMGFDAHWM 252
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
D + L++ G+ ++ + ++ LA RL++V EGGY++ + L AT +
Sbjct: 253 DHSSVLGLSVKGFYDLTKAIKELASSICSDRLVLVLEGGYNLKSTGESLVATFSALTG-- 310
Query: 348 LALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKG 385
+ +D + P PV + Y ++ F++G
Sbjct: 311 ESTFTDSFGFCPNK---PVAPLNQTIIYLKGLMKFMQG 345
>gi|383825469|ref|ZP_09980618.1| histone deacetylase superfamily protein [Mycobacterium xenopi
RIVM700367]
gi|383334761|gb|EID13196.1| histone deacetylase superfamily protein [Mycobacterium xenopi
RIVM700367]
Length = 343
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 154/310 (49%), Gaps = 14/310 (4%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L HPE +DRI+ + L+ + + +L+ HT DY++ L +
Sbjct: 16 LPGHPECADRIRAVWQGLRESGLDARMRPLEVQALDTDAVLAVHTADYLDMLRRINDTPR 75
Query: 107 KMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
+ D T P + A L+ G ++A VL G A +RPPGHHA P A G+C
Sbjct: 76 TIHLDPDTYAGPDALTIARLSAGGVIAATDAVLGGAADNGLAAIRPPGHHAMPDRAMGFC 135
Query: 166 FLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
L N +A + A N G +V+V+D DVH+GNGT Y VL IS H P +
Sbjct: 136 LLGNVAIAARHAQNRYGIQRVLVVDYDVHHGNGTEAMLYDDPSVLYISTHQY-----PFY 190
Query: 225 PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
P G +++G G G GY +NIPLP G+GD Y ++V PA ++F P +I++ VG D+
Sbjct: 191 PGTGAANDVGTGRGQGYTINIPLPAGSGDSNYAMVFDQIVWPAAERFAPELILVSVGFDA 250
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
DP LT++GY + V +A R+ G+++ EGGY L A GV
Sbjct: 251 YWADPLAAMRLTLNGYSRLAEEVIGMARRWCAGKIVFALEGGYD-------LDALRYGVA 303
Query: 345 NLPLALLSDP 354
N+ LL +P
Sbjct: 304 NVARLLLDEP 313
>gi|269836949|ref|YP_003319177.1| histone deacetylase superfamily protein [Sphaerobacter thermophilus
DSM 20745]
gi|269786212|gb|ACZ38355.1| histone deacetylase superfamily [Sphaerobacter thermophilus DSM
20745]
Length = 321
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 153/299 (51%), Gaps = 6/299 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPEN+ R+ I L + + PA + H P+YI + AGG +
Sbjct: 21 HPENAQRLVAIERHLHECGLMNERAVLDPEPATPEDIALVHDPEYIRFIEHIAHAGGAYL 80
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T ++P ++ A+LA G + A+ +VLDG + RPPGHHA G+C NN
Sbjct: 81 DSDTYVSPLTYETAMLAAGAAIQAVDYVLDGAAPRVFVFPRPPGHHALRRQGMGFCIFNN 140
Query: 170 AGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A + AL G +V +ID DVH+GNGT E FY +++VL S+H W P P G
Sbjct: 141 IAVAARHALERRGLRRVAIIDWDVHHGNGTQEAFYDTDEVLFFSVH----QW-PLFPGTG 195
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G Y +N+PLP G+ D Y +++ P + ++ P++I++ G D+ D
Sbjct: 196 HRDEEGVAYGQSYTVNLPLPPGSDDADYARVFDDVIGPRLIEYAPDLILVSAGFDAHRDD 255
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
P +T G+ + R VR AD+ S GRL+++ EGGY+ + AT+ + LP
Sbjct: 256 PLALMEVTERGFYGIARRVREWADQLSEGRLVLLLEGGYNQRALVRSVEATIRALDALP 314
>gi|328953739|ref|YP_004371073.1| histone deacetylase superfamily protein [Desulfobacca acetoxidans
DSM 11109]
gi|328454063|gb|AEB09892.1| histone deacetylase superfamily [Desulfobacca acetoxidans DSM
11109]
Length = 320
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 151/295 (51%), Gaps = 7/295 (2%)
Query: 50 HPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL-VEADKAGGK 107
HPE DR++ I ++ G I + A + ++ H PDY+ + +K
Sbjct: 22 HPERPDRLRAIQQRVISSGLIDELVLIQP-YEAPLDRITRLHDPDYLERFRLACEKKMRI 80
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ S+ ALLAVG L+A V+ G A+ VRPPGHHA+ A G+CF
Sbjct: 81 FQSPDNGICADSYAIALLAVGGVLAACDAVMTGKAHNAFCAVRPPGHHAEHAQAMGFCFF 140
Query: 168 NNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + L G ++ ++D DVH+GNGT F V ISLH + + +P
Sbjct: 141 NNIAIGARYLQDKYGLERIAILDWDVHHGNGTQHLFETDPTVFYISLHQDPFT---CYPG 197
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G +E G+G G G+ LN PLP G+GD+ Y+ + E V+PA+ F P+ +++ G D+ A
Sbjct: 198 TGRQNEQGKGAGLGFTLNFPLPRGSGDKTYLKTIQEGVIPALVAFHPDFLMISSGFDAHA 257
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP L+ DGY MGR++ + A + R++ V EGGY++ C+ L
Sbjct: 258 DDPLAHMELSRDGYAHMGRLMAAFAQEHCNSRIITVLEGGYNLEVLQECVEDHLR 312
>gi|440800420|gb|ELR21459.1| hypothetical protein ACA1_184050 [Acanthamoeba castellanii str.
Neff]
Length = 410
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 179/356 (50%), Gaps = 26/356 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTP---DYINELVEADKAGG 106
HPE R+ L+ I A +L+ HT D ++E E K GG
Sbjct: 29 HPEKPKRLWASWDRLRDKGIVDRCQRVVAREAGEEELMCVHTKEHVDRVHEKAEDAKGGG 88
Query: 107 KMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
D T N S AA LA G + V G +AL+RPPGHHA+P + G+C
Sbjct: 89 MAYFDADTYANEYSERAARLAAGGLVELTTKVATGELDNGFALIRPPGHHAEPGQSQGFC 148
Query: 166 FLNNAGLAVQLALNSG--CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
NN +AVQ L++ K++++D DVH+GNGT + FY ++KVL +SLH +
Sbjct: 149 LFNNVAVAVQTILDTQPHIKKIMIVDWDVHHGNGTEKTFYETDKVLFLSLHRFEPDF--- 205
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P +G ++ +G GEG GYN+N+P G G+ Y++A +LVVP + ++P+++++ G
Sbjct: 206 YPNSGPLESVGAGEGKGYNINVPWNFFGAGNAEYLYAFEQLVVPVAKAYQPDLVLVSCGF 265
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
D++ DP G +T GY++M R++ + + G++++ EGGY+V A C A +
Sbjct: 266 DAAWGDPLGGMTITASGYQQMTRMLLAA----TNGKVVLALEGGYNVRIIATCAEACIRA 321
Query: 343 VL------------NLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
+L +L L A E KV+ ++K+ D P L+ +
Sbjct: 322 LLGEQEFNVEEEQRDLDKRKLQYDAAAAQELMNKAKKVVNAVKEVHADHWPVLRST 377
>gi|372279205|ref|ZP_09515241.1| histone deacetylase superfamily protein [Oceanicola sp. S124]
Length = 373
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 20 FWDDGMLNHDTGKGLFDT---GF-DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+WD+ H G GF P L + PE R+KN++ + I+ ++
Sbjct: 12 YWDERCFWHSGGNYALTLPVGGFVQPMAAGGLPESPETKRRLKNLMDV---SGITADLAL 68
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
S A LL H Y++ AGG + T G + A L+ G +A+
Sbjct: 69 FSAPEASREDLLRVHPESYLDAFKAMSDAGGGELGLRTPFGQGGYEIAALSAGLASAALA 128
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
++ G + AYAL RPPGHH P +G+C L N +A++ A G G+V VID DVH+
Sbjct: 129 DIMAGRVRNAYALSRPPGHHCLPDWPNGFCLLANIAIAIEAAKARGEAGRVAVIDWDVHH 188
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGD 253
GNGT FY + VLTIS+H ++P G + + G G G G+N+NIPLP G G
Sbjct: 189 GNGTEHIFYERDDVLTISIHQEK-----NYPLDTGDIADRGRGAGEGFNMNIPLPPGAGH 243
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y+ M +V+PA+ + P++I++ G D+ FDP R T + + M + ADR
Sbjct: 244 DTYLEVMERIVLPALDGYRPDVIIVACGFDAGIFDPIARMLCTAETFGAMTAQLLQAADR 303
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
GRLL+V EGGY Y +C H LE VL+ ++ DP+A
Sbjct: 304 LCEGRLLLVHEGGYSEVYVPFCGHRVLE-VLSGSDRVVPDPMA 345
>gi|398342792|ref|ZP_10527495.1| acetoin-histone deacetylase [Leptospira inadai serovar Lyme str.
10]
Length = 308
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 159/318 (50%), Gaps = 23/318 (7%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+DD L HDTG + HPE +R++ I++ L + ++ S
Sbjct: 7 YDDIFLQHDTG----------------DYHPERPERLEAIMNRLIKTSYFRNLTRISPEK 50
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
+L H + + G D T +P S+ AAL+A G+ +S K +L
Sbjct: 51 LAEESILPAHDRAHQERFMAIQGKTGGFDGD-TPFSPKSFEAALIAAGSGVSLAKKILSE 109
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAE 200
ALVRPPGHHA+ A G+C LNN + LN KV ++D DVH+GNGT E
Sbjct: 110 DLDAGIALVRPPGHHAETGRAMGFCLLNNIAITAHYLLNRNIRKVYILDWDVHHGNGTQE 169
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
FY S+KV SLH P +P +G+ E+G G+G G+ LN+PLP+ + + Y+
Sbjct: 170 IFYDSDKVFFASLHQY-----PFYPGSGSAREIGSGQGLGFTLNVPLPSHSSNSDYLKEF 224
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
E ++P+I +FEP +++ G D+ DP G L+ + + E R V+ A + SG +++
Sbjct: 225 QEKIIPSILEFEPEFLLISAGFDAHKQDPLGGMSLSTNAFSEFTRSVKEAAFQ-SGSKII 283
Query: 321 IVQEGGYHVTYSAYCLHA 338
EGGY + A + A
Sbjct: 284 SFLEGGYDLQALAESVEA 301
>gi|347522586|ref|YP_004780156.1| histone deacetylase superfamily protein [Pyrolobus fumarii 1A]
gi|343459468|gb|AEM37904.1| histone deacetylase superfamily [Pyrolobus fumarii 1A]
Length = 351
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 155/295 (52%), Gaps = 10/295 (3%)
Query: 34 LFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPD 93
+F+ PG+ HPE R++ I R ++ + + H D
Sbjct: 12 VFEKHRPPGY-----SHPERPARVRVIREEAARLASDGIVALLEPRSVPLEEATRVHDQD 66
Query: 94 YINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
Y+ + EA + + D T + PGS AAL A+GT A + +G ++ YA VRPPG
Sbjct: 67 YVGMVAEASEYPQYLDPD-TYVGPGSLEAALHALGTAYEAARLAYEGRYRVVYAAVRPPG 125
Query: 154 HHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HHA A G+C NN A Q + + G ++ +ID+D H+G+GTAE FY VL IS
Sbjct: 126 HHAGKRRAAGFCLFNNIAYAAQRMIEDHGLKRIAIIDVDAHWGDGTAEIFYDRRDVLYIS 185
Query: 213 LHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFE 272
H + + +P G +ELG GEG GY +NI +P D+ Y+ A E+ +P +++++
Sbjct: 186 FHQDPRTL---YPGRGFPEELGRGEGLGYTVNIMMPPLATDQLYLKAWHEIAMPILERYK 242
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
P +I++ +G D+ DP LT++GY + R V LA+R +G L ++ EGGY
Sbjct: 243 PQLILVSLGFDAHKDDPLTDLALTLEGYWALLREVLVLAERLTGRGLALMLEGGY 297
>gi|149391973|gb|ABR25883.1| histone deacetylase-like amidohydrolase [Oryza sativa Indica Group]
Length = 117
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 97/115 (84%)
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
KF P ++V VVGQDSSAFDPNGRQCLTMDGYR++G+I+R +AD++S G++LIVQEGGYH+
Sbjct: 1 KFRPELMVFVVGQDSSAFDPNGRQCLTMDGYRKIGQIMRGMADQHSNGQILIVQEGGYHI 60
Query: 330 TYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
TYSAYCLHATLEGVLNL LL DP+ +YP+DE + ++ ++ IK+ + IPFLK
Sbjct: 61 TYSAYCLHATLEGVLNLQAPLLDDPLGFYPDDEKYTMQAVDIIKKCWKESIPFLK 115
>gi|448417796|ref|ZP_21579601.1| deacetylase [Halosarcina pallida JCM 14848]
gi|445677369|gb|ELZ29871.1| deacetylase [Halosarcina pallida JCM 14848]
Length = 338
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 167/337 (49%), Gaps = 35/337 (10%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTGK +HPE +DR++ I L + + Y+ S A
Sbjct: 10 LAHDTGK----------------RHPETADRLRAIRRALAKRHGAEYVDASS---ATDED 50
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--K 143
+ S H DY+ E+ E + GG TV + +W AAL + G + + ++G
Sbjct: 51 VASVHDDDYVAEIREFCEGGGGNWDPDTVASEDTWDAALASAGLSQWGARAAVEGADARD 110
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAE 200
+A+ RPPGHHA A G+CF+NNA +A Q + + +V + D DVH+GNGT +
Sbjct: 111 TPFAIGRPPGHHAVEDDAMGFCFVNNAAVAAQTVIEADDLDVERVAIFDWDVHHGNGTQD 170
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
FY V S+H + +P G VDELG G+G G LN PL G GD Y +
Sbjct: 171 IFYDRGDVFYASVHED-----GLYPGTGEVDELGAGDGEGATLNAPLAAGAGDADYHLFV 225
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+++ PA+++F+P++ ++ G D+ DP R ++ +GY +M VRS+AD G L
Sbjct: 226 EDVLRPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAQMTDGVRSIADDVDAG-LA 284
Query: 321 IVQEGGY---HVTYSAYCLHATLEGVLNLPLALLSDP 354
V EGGY ++ +H T +G PL L P
Sbjct: 285 FVLEGGYGLDTLSEGVAIVHETFDG--RSPLELEEAP 319
>gi|347755697|ref|YP_004863261.1| deacetylase [Candidatus Chloracidobacterium thermophilum B]
gi|347588215|gb|AEP12745.1| Deacetylase, including histone deacetylase and acetoin utilization
protein [Candidatus Chloracidobacterium thermophilum B]
Length = 329
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 154/303 (50%), Gaps = 14/303 (4%)
Query: 50 HPENSDRIKNIVSILKRG-PISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG-- 106
HPE + R I+ L++ + W PA +L HTPD++ + EA +A
Sbjct: 21 HPETAARTTRIIRALEQDVHVQTACQWGMPRPATTDELARVHTPDHLARVAEASRAAQAR 80
Query: 107 -KMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
++V TV++ GS+ AA A G L+A++ + G + A+ RPPGHHA P A G
Sbjct: 81 QQLVALDPDTVVSAGSYEAAGDAAGAVLAAVEAIHQGKARRAFVAARPPGHHATPNRAMG 140
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C NN + + A + G +V+++D DVH+GNGT + FY V S+H P
Sbjct: 141 FCLFNNVAVGARHAQHLGFQRVLIVDWDVHHGNGTQDIFYADPSVFFFSIHQF-----PH 195
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G+ E G G G G+ LN+PL GT Y+ A + F P+ + + G D
Sbjct: 196 YPGTGSQWERGVGPGEGFTLNVPLRAGTPAAAYLEAFEAGLETITSHFHPDFVFISAGFD 255
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--SAYCLH-ATL 340
+ DP G LT + +M +V +ADR+S GRL+ V EGGY++ C H A L
Sbjct: 256 AHVADPLGNLNLTDRDFVQMTHLVNKVADRFSAGRLVSVLEGGYNLDTLPQTVCHHVAAL 315
Query: 341 EGV 343
GV
Sbjct: 316 AGV 318
>gi|56697382|ref|YP_167750.1| histone deacetylase/AcuC/AphA family protein [Ruegeria pomeroyi
DSS-3]
gi|56679119|gb|AAV95785.1| histone deacetylase/AcuC/AphA family protein [Ruegeria pomeroyi
DSS-3]
Length = 371
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 155/295 (52%), Gaps = 13/295 (4%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
++PE R++N+V + ++S A + H +I+ L + GG
Sbjct: 45 ENPETKRRLQNLVQATG---LWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGD 101
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T P S A LAVG + AM V+ G + AY L RPPGHHA P +A G+C L
Sbjct: 102 AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLA 161
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP-Q 226
NA L ++ + G ++ V+D DVH+GNGT F VLTISLH ++ P
Sbjct: 162 NAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQDN-----LFPLD 216
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G + G G N+N+PLP G+G Y A ++V+PA+ F P +IVL G D+SA
Sbjct: 217 SGGIGVKGAGNS---NINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASA 273
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
DP G L+ + +R M R V +LAD++ GR+++ EGGY Y YC A LE
Sbjct: 274 VDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYCGLAVLE 328
>gi|392412457|ref|YP_006449064.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
gi|390625593|gb|AFM26800.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
Length = 345
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 153/279 (54%), Gaps = 7/279 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ +R++++ ++ + +++ A + QL HTP YI +++ +
Sbjct: 21 HPESPNRLRSLYRLVDK-EFKDVVTFVEPQSATLEQLELVHTPQYIKQIMSTAGKEFTNL 79
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T ++ ++ AA LAVG L A++ +++G + + LVRPPGHHA A G+C NN
Sbjct: 80 APDTPVSANTYLAAWLAVGGCLKALEALMEGRFRACFCLVRPPGHHALTDRAGGFCIFNN 139
Query: 170 AGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
G+ + A+ + G +++++D D+H+GN + FY N+VL S H + W +P G
Sbjct: 140 LGVTAKYAIETYGLKRILIVDWDIHHGNALQDLFYGENRVLYFSSH--YRGW---YPHTG 194
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE GE EG GYN+N+P+P D +H ELV +++++P +I++ G D+ D
Sbjct: 195 DWDEFGESEGLGYNVNLPVPKEMTDNDIIHVYRELVGRIVRRWKPELILIAAGFDAHEKD 254
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
P GR L+ + Y + +++ +D +L+ EGGY
Sbjct: 255 PLGRTRLSENAYGWLMQMILQFSDAAKSAPILLSLEGGY 293
>gi|183220191|ref|YP_001838187.1| putative deacetylase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910311|ref|YP_001961866.1| histone deacetylase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167774987|gb|ABZ93288.1| Histone deacetylase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778613|gb|ABZ96911.1| Putative deacetylase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 311
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 153/293 (52%), Gaps = 11/293 (3%)
Query: 39 FDPGFLEVLEK--HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLS-FHTPDYI 95
F P FLE HPE R+++I+ + P S +W L+S H P+Y+
Sbjct: 7 FHPTFLEHKTGPGHPETHVRLESILEKISDLP-SESFTWEKTFKEAPLSLISEIHDPNYV 65
Query: 96 NELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
+ + + G DG TV +P ++ AA LAVG ++ + +LDG K ALVRPPGH
Sbjct: 66 RLVAKVCEEKGSGYLDGDTVYSPNTFQAASLAVGAGVTLAQDILDGKLKNGMALVRPPGH 125
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA+ A G+C NN + + + G +++++D DVH+GNGT FY + V +SLH
Sbjct: 126 HAESDHAMGFCLFNNIAITAKYLQSQGIKRILILDWDVHHGNGTQHQFYEDDSVYFVSLH 185
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
P +P G+ E G+G+GFG LN+P+ G ++ Y+ L+ ++ F+P
Sbjct: 186 QY-----PFYPGTGSEKESGQGKGFGTTLNLPMARGAEEKQYLDQFP-LIHKEMETFQPE 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+++ G D+ DP L Y +M V+ +A +SGG+LL EGGY
Sbjct: 240 FVLVSAGFDAHRNDPLAGMNLNSSSYEKMTNEVKQIARVHSGGKLLSFLEGGY 292
>gi|399076298|ref|ZP_10751951.1| deacetylase, histone deacetylase/acetoin utilization protein
[Caulobacter sp. AP07]
gi|398037631|gb|EJL30816.1| deacetylase, histone deacetylase/acetoin utilization protein
[Caulobacter sp. AP07]
Length = 374
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 168/330 (50%), Gaps = 15/330 (4%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLE----KHPENSDRIKNIVSILKRGPISPYIS 74
+ W + + H GK +G PG V + PE RIKN+ L ++ +S
Sbjct: 7 LVWHETFMWHQQGK---YSGLLPGVYPVQPGSHVEGPEPKRRIKNL---LDATGMTAKLS 60
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
PA +L H+ Y+ +L + + GS A LA G + A
Sbjct: 61 VIEPRPATDIELERAHSKAYLAQLAHDNALPEASAGFDAPFSRGSVDLARLAAGGVILAA 120
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVH 193
+ V G AYALVRP GHHA+ G+C +NNA +A L + ++ +D+DVH
Sbjct: 121 ERVASGALDNAYALVRPIGHHAEAAEGKGFCLINNAAVAAAHLLATTDIRRIAFVDVDVH 180
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
+GNG F+R +VLTIS+H W P P G V +G G G +N+N+PLP G G
Sbjct: 181 HGNGAENIFWRDPRVLTISIHQER--WFP--PDTGDVASIGAGSGEHFNINVPLPAGCGH 236
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y A ++V+PA++ + P I + G D+ A DP GR ++ +G+R M + + +ADR
Sbjct: 237 GAYEAAFEQVVLPALELYRPEFIFVPFGYDAGAQDPLGRMIVSSNGFRAMAQRLVEVADR 296
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
++GGRL+ QEGGY+ + + + A +E +
Sbjct: 297 HAGGRLVATQEGGYNESTTPFMALAVIEAL 326
>gi|196229464|ref|ZP_03128329.1| histone deacetylase superfamily [Chthoniobacter flavus Ellin428]
gi|196226696|gb|EDY21201.1| histone deacetylase superfamily [Chthoniobacter flavus Ellin428]
Length = 313
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 156/319 (48%), Gaps = 33/319 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+ +F D HD G+G HPE+ R ++ LK+ + W
Sbjct: 1 MTGLFADARCQEHDPGRG----------------HPESPARFAAVMERLKQSGL-----W 39
Query: 76 HSGIPAQIPQLLS-----FHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGT 129
P + + S H DY+ +AG + G T + SW AA LA G
Sbjct: 40 EKLTPIEPRSVTSEDLELVHERDYLRLAEREIRAGASQLSTGDTSVCEASWDAARLAAGG 99
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVI 188
++A+ V++G A+ RPPGHHA G+C LNN +A + A G +V+++
Sbjct: 100 AMAAVDAVMEGKVANAFCAGRPPGHHASTDRGMGFCVLNNIAIAARHAQRRHGIERVLIV 159
Query: 189 DIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP 248
D DVH+GNGT + FY V S H + P +P G E G GEG G LN PLP
Sbjct: 160 DWDVHHGNGTQDIFYEDGSVFFFSTHQS-----PWYPGTGHARETGAGEGRGTTLNCPLP 214
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
G+G R A E ++PA++KF+P +++ G DS DP G LT + ++ +IVR
Sbjct: 215 GGSGHREIFVAFNEQLLPAMEKFQPQFVLVSAGFDSRGGDPLGDFLLTDGDFADLTKIVR 274
Query: 309 SLADRYSGGRLLIVQEGGY 327
+AD+++ GR++ + EGGY
Sbjct: 275 GIADKHAKGRVVSLLEGGY 293
>gi|83753890|pdb|1ZZ0|A Chain A, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753891|pdb|1ZZ0|B Chain B, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753892|pdb|1ZZ0|C Chain C, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753893|pdb|1ZZ0|D Chain D, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753894|pdb|1ZZ1|A Chain A, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753895|pdb|1ZZ1|B Chain B, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753896|pdb|1ZZ1|C Chain C, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753897|pdb|1ZZ1|D Chain D, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753898|pdb|1ZZ3|A Chain A, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753899|pdb|1ZZ3|B Chain B, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753900|pdb|1ZZ3|C Chain C, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753901|pdb|1ZZ3|D Chain D, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|145579387|pdb|2GH6|A Chain A, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579388|pdb|2GH6|B Chain B, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579389|pdb|2GH6|C Chain C, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579390|pdb|2GH6|D Chain D, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
Length = 369
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 13/304 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADK--AGGK 107
HP+ R +V G I +++ + + A +L H+ ++ + GG
Sbjct: 39 HPDTKRRFHELVC--ASGQIE-HLTPIAAVAATDADILRAHSAAHLENMKRVSNLPTGGD 95
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T++ G A L+ G + + V G YALV PPGHHA A G+C
Sbjct: 96 TGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNAAMGFCIF 155
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A A G +V ++D DVH+GNGT + ++ VLTISLH H + P
Sbjct: 156 NNTSVAAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLH-QHLCFPP---D 211
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G E G G G GYN+N+PLP G+G+ Y+HAM ++V+PA++ + P +I++ G D+S
Sbjct: 212 SGYSTERGAGNGHGYNINVPLPPGSGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASM 271
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE---GV 343
DP R +T DG+R+M R A GR++ VQEGGY Y +C A +E GV
Sbjct: 272 LDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYSPHYLPFCGLAVIEELTGV 331
Query: 344 LNLP 347
+LP
Sbjct: 332 RSLP 335
>gi|164519535|pdb|2VCG|A Chain A, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519536|pdb|2VCG|B Chain B, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519537|pdb|2VCG|C Chain C, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519538|pdb|2VCG|D Chain D, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
Length = 375
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 13/304 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADK--AGGK 107
HP+ R +V G I +++ + + A +L H+ ++ + GG
Sbjct: 45 HPDTKRRFHELVC--ASGQIE-HLTPIAAVAATDADILRAHSAAHLENMKRVSNLPTGGD 101
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T++ G A L+ G + + V G YALV PPGHHA A G+C
Sbjct: 102 TGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNAAMGFCIF 161
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A A G +V ++D DVH+GNGT + ++ VLTISLH H + P
Sbjct: 162 NNTSVAAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLH-QHLCFPP---D 217
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G E G G G GYN+N+PLP G+G+ Y+HAM ++V+PA++ + P +I++ G D+S
Sbjct: 218 SGYSTERGAGNGHGYNINVPLPPGSGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASM 277
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE---GV 343
DP R +T DG+R+M R A GR++ VQEGGY Y +C A +E GV
Sbjct: 278 LDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYSPHYLPFCGLAVIEELTGV 337
Query: 344 LNLP 347
+LP
Sbjct: 338 RSLP 341
>gi|399155693|ref|ZP_10755760.1| histone deacetylase superfamily protein [SAR324 cluster bacterium
SCGC AAA001-C10]
Length = 315
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 165/310 (53%), Gaps = 8/310 (2%)
Query: 36 DTGF--DPGFLE-VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTP 92
+TGF +P +LE HPEN++R++ I L+ + + SG A ++ H+
Sbjct: 2 NTGFYTNPIYLEHDTGSHPENANRLRAIQEKLESEGLLERLILQSGRSATSQEIKLLHSE 61
Query: 93 DYINELVEADKAGGKMV-CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRP 151
I+ + A ++G + + +++ ++ AA AVG+ L + V + A+ VRP
Sbjct: 62 KLISAVEAAAESGARTLHTPDCIISAQTFNAAAHAVGSVLDGVIEVAERRLDNAFCSVRP 121
Query: 152 PGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLT 210
PGHHA+ A G+CF NN LA + L G +V++ D DVH+GNGT F +
Sbjct: 122 PGHHAENDSAMGFCFFNNIALAAEFLTREMGFKRVLIFDFDVHHGNGTQHFFEERADIFF 181
Query: 211 ISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQK 270
S+H + + S P G E G G G G+ LN+P+P G GD Y+ + V P +++
Sbjct: 182 ASIHQDPRT---SFPGTGFAHERGSGGGAGFTLNVPVPPGMGDEEYLQIFYDQVQPKLEE 238
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
++P+ +++ G D+ DP LT +RE+ R ++ LA++Y+GGR++ + EGGY +
Sbjct: 239 YKPDFVLVSAGFDAHRDDPLASLNLTERTFRELTRELKQLAEQYAGGRIMSLLEGGYDLN 298
Query: 331 YSAYCLHATL 340
+ C+ L
Sbjct: 299 ALSSCVQEHL 308
>gi|52550445|gb|AAU84294.1| acetoin utilization protein [uncultured archaeon GZfos9D1]
Length = 351
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 166/307 (54%), Gaps = 15/307 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE ++R++ I+ L+ I+ + A QL H P+YI E+ + GG +
Sbjct: 23 HPETAERLRVIIRKLEETGIAEKLRRIVPTKASKEQLRYVHAPEYIKEVEAICRRGGGAL 82
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCFL 167
T L ++ ALLA G + A+ V+D K +AL+RPPGHHA P G+C
Sbjct: 83 DPDTPLCEDTYEIALLAAGGVIKAVDEVMDESNSLKHVFALIRPPGHHATPNKGMGFCIF 142
Query: 168 NNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A + L G +V++ D DVH+GNGT F+ VL S H P +P
Sbjct: 143 NNIAIAAEHLKREYGINRVLIADWDVHHGNGTQRMFFDDASVLYFSTHQY-----PHYPG 197
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G ++E+G+GEG G+ +N+PLP GT D Y++A+ ++VP +F P+ +++ VG D+ A
Sbjct: 198 TGWIEEVGKGEGEGFTVNVPLPAGTDDDSYLYALNNILVPIAMEFRPDFVLVSVGFDAHA 257
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP +T G+ +++ +A++ GR+++ EGGY+ L+A E L++
Sbjct: 258 ADPLASMNVTSRGFGRFTSLIKDIAEKNGNGRVVMALEGGYN-------LNAIAESALSV 310
Query: 347 PLALLSD 353
+LLSD
Sbjct: 311 FNSLLSD 317
>gi|167834956|ref|ZP_02461839.1| histone deacetylase family protein [Burkholderia thailandensis
MSMB43]
Length = 256
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 130/219 (59%), Gaps = 7/219 (3%)
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVV 186
G +A+ V+ G + AYAL+RP GHHA A GYC+ NN +A + A G +V
Sbjct: 1 GAACAAVDAVMTGPLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAVHGVERVA 60
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNI 245
++D DVH+GNGT + FY VL +SLH + P +G E G G G GYN N+
Sbjct: 61 IVDWDVHHGNGTQQVFYDDPSVLFVSLHE-----AANFPVDGGEARETGGGAGAGYNANV 115
Query: 246 PLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
PLP+GTGD GY HA ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R
Sbjct: 116 PLPSGTGDAGYAHAFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMAR 175
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+R A GR++++QEGGY + Y LEG++
Sbjct: 176 ALRQAAGSTCDGRIVMLQEGGYSLPYLPIATLGVLEGLV 214
>gi|118594918|ref|ZP_01552265.1| histone deacetylase family protein [Methylophilales bacterium
HTCC2181]
gi|118440696|gb|EAV47323.1| histone deacetylase family protein [Methylophilales bacterium
HTCC2181]
Length = 346
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 169/334 (50%), Gaps = 30/334 (8%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
MA SP + A E I V +D ML HDTG G HPE RI++
Sbjct: 15 MALSPLS--AVAVEKKIAVLYDKRMLAHDTGIG----------------HPETPRRIESA 56
Query: 61 VSILKRGPI-SPYISWHSGIPAQIPQLLSFHTPDYINEL---VEADKAG--GKMVCDGTV 114
+ +K + + ++ W S L HT YI+++ + KA + V
Sbjct: 57 YTAIKNDKLLTKHLIWPSIKEVSDTTLQLVHTKKYIDQIAKEISTLKATETAYLSTGDVV 116
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
++ S AA +AVG+ + + ++ A+ALVRPPGHHA G+C NN +A
Sbjct: 117 ISRNSDMAARVAVGSVIEGVNQIMTNVASSAFALVRPPGHHASSDKGMGFCIYNNIAIAA 176
Query: 175 Q-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDEL 233
+ L G +++++D DVH+GNGT + FY V S+H + P +P G+ E+
Sbjct: 177 RYLQQQFGLERILIVDFDVHHGNGTQDIFYEDPSVFYFSVHQH-----PLYPGTGSPQEI 231
Query: 234 GEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQ 293
G G+G GY LN+ LP G+ DR V+A + +V A++K++P I++ G D DP G
Sbjct: 232 GSGKGEGYTLNVELPRGSNDRDLVNAFNDRLVSAMKKYKPEFILVSAGFDGHHNDPLGEL 291
Query: 294 CLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ GY+ + +++ +L+ ++ +++ V EGGY
Sbjct: 292 SYSPRGYQGVAKVLSNLSREHAKEKIMYVVEGGY 325
>gi|408382627|ref|ZP_11180170.1| histone deacetylase superfamily protein [Methanobacterium
formicicum DSM 3637]
gi|407814703|gb|EKF85327.1| histone deacetylase superfamily protein [Methanobacterium
formicicum DSM 3637]
Length = 342
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 150/279 (53%), Gaps = 10/279 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPEN +R++ ++ L + + H +PA LL HT Y+N L + K+GG +
Sbjct: 18 HPENQERLEVMMKYLIEQGEAEKLDIHLPVPASDEDLLRVHTKHYLNHLQKFTKSGGGYL 77
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T +P S+ A LA G ++A + V D AY++ RPPGHHA A G+C +NN
Sbjct: 78 DFDTFASPESYQIAKLAAGGAITASQLVFD-QSDFAYSMARPPGHHATADSALGFCLINN 136
Query: 170 AGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ + G K V++D D HYGNGTAE FY +VL IS+H + + P G
Sbjct: 137 LAVALEYMRKTHGLRKFVIVDFDAHYGNGTAEIFYNDPQVLYISIHQDPRTIFPG---KG 193
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
++E G G G+NLNIPLP G+G Y++ + +++ PA +KF+ + L VG D D
Sbjct: 194 FIEETGSRMGEGFNLNIPLPPGSGTSDYIYILEKILEPACRKFQADFYFLDVGFDGHQDD 253
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
P L D Y + ++ + +++++ EGGY
Sbjct: 254 PLSSLQLDDDFYPWITSHMQEIT-----PKMVLILEGGY 287
>gi|195953231|ref|YP_002121521.1| histone deacetylase [Hydrogenobaculum sp. Y04AAS1]
gi|195932843|gb|ACG57543.1| histone deacetylase superfamily [Hydrogenobaculum sp. Y04AAS1]
Length = 309
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 151/304 (49%), Gaps = 13/304 (4%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
KHPEN++R+K + + + I +S+ A + ++ H YI E+ E K GG
Sbjct: 18 KHPENANRLKVALEYIYKSDIKNILSFEKPRKATVEEVSKIHDTYYIQEIYEFCKKGGGY 77
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T S+ AA++ G L A++ + D + A+ LVRPPGHHA+ A G+C N
Sbjct: 78 LDPDTYAYQHSYDAAMMVAGAILKAIEDIKDAKQEAAFCLVRPPGHHAEYAKAMGFCIFN 137
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
N + + A N G KV + D DVH+ NGT FY V S H P +P G
Sbjct: 138 NVAIGARKAQNLGYKKVYIADFDVHHPNGTQHTFYEDGSVFLFSTHCY-----PFYPGTG 192
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G GEGFG LN+PL GTGD Y+ + + + F+P+++++ G D D
Sbjct: 193 AADERGFGEGFGTTLNVPLRAGTGDETYIEVYQTKFLGSFRAFKPDILLISAGYDLHEDD 252
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P G +T +E+ I+ A + ++ EGGY+ +AT +G+L+
Sbjct: 253 PLGPMRVTSQSIKEITSILIDAAKELN-IPVVATLEGGYN-------YNATAQGILDTIF 304
Query: 349 ALLS 352
+++
Sbjct: 305 NMVN 308
>gi|336476702|ref|YP_004615843.1| histone deacetylase [Methanosalsum zhilinae DSM 4017]
gi|335930083|gb|AEH60624.1| Histone deacetylase [Methanosalsum zhilinae DSM 4017]
Length = 340
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 157/284 (55%), Gaps = 21/284 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ------LLSFHTPDYINELVEADK 103
HPE++ R+K I+ L+ I P IPQ + + H DYI + E
Sbjct: 18 HPESASRLKAIMDKLEENGI------FEDNPLVIPQYADLSLIENVHDLDYIKSVEEHCM 71
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ D TV++ S+ AAL + G + A + VLD +A+AL RPPGHHA A G
Sbjct: 72 REIPLDPD-TVVSRDSFNAALASAGGAVKATELVLDE--GLAFALTRPPGHHAGYRKARG 128
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C NN +A + A + G +++++D DVH+GNGT E FY VL S H+ P
Sbjct: 129 FCLFNNIAIAARYAQSRGFERILIVDWDVHHGNGTQEIFYSDPGVLYFSTHLY-----PW 183
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
P G +DE+G+G+ G+N+N+PLP G + Y++ +L++P +F+P MI++ G D
Sbjct: 184 FPGTGWLDEIGDGDAQGFNINVPLPPGLNNSDYIYIFKKLLLPISLQFDPQMIMVSAGMD 243
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
S + DP G +T +G+ E+ IV +A + + R+++V EGGY
Sbjct: 244 SYSRDPLGNMNITSEGFGELASIVSYIASK-TCNRMVLVLEGGY 286
>gi|283779728|ref|YP_003370483.1| histone deacetylase superfamily protein [Pirellula staleyi DSM
6068]
gi|283438181|gb|ADB16623.1| histone deacetylase superfamily [Pirellula staleyi DSM 6068]
Length = 310
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 7/307 (2%)
Query: 40 DPGF-LEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
DP F L + HPE+ R+ I + P+ + A I QL H P YI+E+
Sbjct: 7 DPLFRLHMTGAHPEHPRRLVAIEERIDASPLPARCTLPIWKQATIDQLARVHDPLYIDEI 66
Query: 99 VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
+ AGG + TVL+P S+ AA+LA G +A++ V+ G K A+ L RPPGHHA P
Sbjct: 67 RKFAAAGGGRIEADTVLSPRSYDAAILASGAACNAVERVIAGEEKNAFLLHRPPGHHALP 126
Query: 159 TMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH 217
A G+C N+ +A AL+ G +V+++D DVH+GNGT + FY S++V S H
Sbjct: 127 HDAMGFCLFNHVAVAAAHALDQLGLNRVLIVDWDVHHGNGTQDMFYTSDRVAFFSSH--- 183
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIV 277
W P +P G DE G +G G+N N+PL G R ++ + + +P +++
Sbjct: 184 -RW-PFYPGTGAADETGTRDGLGFNKNLPLEFGIDPREFLAQFAGELQAFADRVKPELVL 241
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G D+ DP G L + + E+ RIV+ +A ++ GR++ + EGGY+ A +
Sbjct: 242 ISAGFDAHRDDPIGSLSLEAEHFGELTRIVKQIAAVHAQGRVVSLLEGGYNPAKLAESVE 301
Query: 338 ATLEGVL 344
L +L
Sbjct: 302 VHLAELL 308
>gi|452944050|ref|YP_007500215.1| histone deacetylase superfamily [Hydrogenobaculum sp. HO]
gi|452882468|gb|AGG15172.1| histone deacetylase superfamily [Hydrogenobaculum sp. HO]
Length = 309
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 148/297 (49%), Gaps = 6/297 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
KHPEN+ R+K + + + I +S+ A + ++ H YI E+ E K GG
Sbjct: 18 KHPENATRLKVALEYIYKSDIKNVLSFEKPRKATVEEVSKIHDTYYIQEIYEFCKKGGGY 77
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T + S+ A++A G L A++ + D + A+ LVRPPGHHA+ A G+C N
Sbjct: 78 LDPDTYVYQYSYDVAMMAAGAILKAIEDIKDAKQEAAFCLVRPPGHHAEYAKAMGFCIFN 137
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
N + + A N G KV + D DVH+ NGT FY V S H P +P G
Sbjct: 138 NVAIGARKAQNLGYKKVYIADFDVHHPNGTQHIFYEDGSVFLFSTHCY-----PFYPGTG 192
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G GEG G LN+PL GTGD Y+ + + F+P+++++ G D D
Sbjct: 193 AADEKGFGEGLGTTLNVPLRAGTGDETYIEVYQTKFSESFRAFKPDILLISAGYDLHEDD 252
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
P G +T G +E+ I+ + A + ++ EGGY+ +A + TL ++N
Sbjct: 253 PLGPMRVTSQGIKEITNILINAAKELN-VPVVATLEGGYNYNATAQGILDTLFNMVN 308
>gi|385304056|gb|EIF48091.1| histone deacetylase hda1 [Dekkera bruxellensis AWRI1499]
Length = 718
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 167/312 (53%), Gaps = 30/312 (9%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+LE ++ HPE+ RI I IL + P +S I PA ++L+
Sbjct: 62 SYLEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGRDNIGDLMXKIPVRPATDAEILAV 121
Query: 90 HTPDYINELVEADKAGGKM-------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
HT +++ E ++ K V D N S+ +A LA G + A K V++G
Sbjct: 122 HTREHL-EFIKKTTTMTKEQLLHETDVGDSVYFNNDSYSSAKLASGGAIEACKAVVEGRV 180
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTA 199
K A A+VRPPGHHA+P G+C +N +A + L + K+ ++D DVH+GNGT
Sbjct: 181 KNALAVVRPPGHHAEPDAPGGFCLFSNVAVAARAILKNYPESVRKIAIVDWDVHHGNGTQ 240
Query: 200 EGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYV 257
+ F+ +VL +SLH G + P P G D++GEG G G+N+N+P P G GD Y+
Sbjct: 241 KAFFNDPRVLYMSLHRYEQGKYYPGTPAGGA-DQVGEGAGVGFNVNVPWPTGGMGDAEYI 299
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+A ++++P + +F+P+ +++ G D++ DP G ++ GY +M ++++A G
Sbjct: 300 YAFRKVIMPILYEFKPDFLIVSSGFDAAEGDPIGGCHVSPSGYSQMTHYMKTIAQ----G 355
Query: 318 RLLIVQEGGYHV 329
+ +V EGGY++
Sbjct: 356 NICVVLEGGYNL 367
>gi|448376673|ref|ZP_21559673.1| histone deacetylase [Halovivax asiaticus JCM 14624]
gi|445656409|gb|ELZ09243.1| histone deacetylase [Halovivax asiaticus JCM 14624]
Length = 336
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 153/301 (50%), Gaps = 17/301 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE R+ +I R +S+ PA + + + H P Y+ E D GG+
Sbjct: 17 RHPEAPTRLD---AIRDRLASVHGVSYVESDPASVETIEAIHDPAYVEEFRSFCDDGGGE 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH--GKIAYALVRPPGHHAQPTMADGYC 165
D + + +W AAL + G A L G K ++++ RPPGHHA A G+C
Sbjct: 74 WDPDTSAVE-ATWDAALQSAGLACWAADEALAGEVGRKTSFSIGRPPGHHAVVDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
F NN +A Q A++ G +V ++D DVH+GNGT + FY V S+H + +
Sbjct: 133 FFNNVAVAAQHAIDDGGADRVAIVDWDVHHGNGTQDLFYNREDVFFASIHED-----GLY 187
Query: 225 PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
P G VDE GEG G G +N+P+P+ D Y+ EL+ PA++ F+P++++L G D+
Sbjct: 188 PGTGEVDETGEGAGEGTTINVPMPDSATDSAYLAVFDELLGPALRDFDPDLLLLSAGFDA 247
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHATLE 341
DP R LT + Y M RS+A+ G L +V EGGY + S +H T +
Sbjct: 248 HRHDPISRVRLTTEAYALMADRARSIAETVDAG-LAVVLEGGYSLDVLADSVALVHETFD 306
Query: 342 G 342
G
Sbjct: 307 G 307
>gi|392410691|ref|YP_006447298.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
gi|390623827|gb|AFM25034.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
Length = 346
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 158/326 (48%), Gaps = 23/326 (7%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ V DD L H TG HPE + R+K + +L + I+
Sbjct: 5 VGVVRDDRYLLHQTGL----------------DHPERAARLKTVYRMLDKEFADALITIE 48
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
PA + L HTP +I ++++ + + T ++ S+ +A LA G + ++
Sbjct: 49 PE-PATLEHLELVHTPAFIRKILKTSEHDFINLAPDTPVSSQSYISAWLAAGGCIRGLQA 107
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYG 195
+L G + LVRPPGHHA P A GYC NN G+A + A+ G +++++D D+H+G
Sbjct: 108 LLSGRCDAVFCLVRPPGHHATPDKAGGYCIFNNIGIAAKYAIERHGFRRILILDFDIHHG 167
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NG + FY + VL +S H S G +P G E G G G GY++NIP+PN D
Sbjct: 168 NGIQDLFYEDDSVLYLSTH----SLG-RYPHTGEWSETGTGRGLGYSVNIPVPNDISDMD 222
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
+++ +L+ P ++ + P +I++ G D DP GR LT +R + + L D
Sbjct: 223 FLYMYWKLLGPIMRYYRPELILVAAGFDGHHRDPIGRTQLTEQAFRWITEAILELRDAVK 282
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLE 341
LL EGG+ A C+ L+
Sbjct: 283 SPPLLFALEGGHDAAALADCVKQVLD 308
>gi|398336031|ref|ZP_10520736.1| histone deacetylase [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 352
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 10/300 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL--SFHTPDYINELVEADKAGGK 107
H ENSDRI + + K S + S +S + H+ +++ + ++ G
Sbjct: 41 HFENSDRI--LACLNKLTQTSYFGSLYSPKLKDVDPTFYKEIHSRNHLQRIEDSKNKRGY 98
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW AA A + ++ ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 99 FDSD-TPFTENSWLAAYSAANSGITLADALISGKIKNGFSLLRPPGHHAEHNRIMGFCML 157
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN +A + +G K+ +ID DVH+GNGT E FYR V +S+H P +P
Sbjct: 158 NNVAIAARYLQKNGFKKIFIIDWDVHHGNGTQEIFYRDPNVFYLSIHQ-----FPFYPMT 212
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G +E+G G+G G NIP+ +GD+ Y+ E+V+P ++ EPN+I++ G D+
Sbjct: 213 GHSEEIGYGDGVGTTKNIPMQTDSGDQSYIQKFKEIVIPTMEHVEPNIILISAGFDAHKE 272
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP G +T +G+ ++ IV AD+ G +L EGGY++ A + A + + + P
Sbjct: 273 DPLGGMNITTNGFEQLSHIVLESADKICQGNVLSFLEGGYNLKALAESVEAHIAVLKSFP 332
>gi|410941647|ref|ZP_11373441.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
gi|410783196|gb|EKR72193.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
Length = 313
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 149/289 (51%), Gaps = 22/289 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSF--------HTPDYINELVEA 101
H ENSDR+ ++ L R S Y + P++ F H+ + I ++ +
Sbjct: 22 HYENSDRL---LACLNRLLQSSYFN-----SLFFPEMKKFPHEFLNEIHSKNQIQKIENS 73
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
G D T SW +A A + ++ K ++ G K ++L+RPPGHHA
Sbjct: 74 KGKRGYFDSD-TPFTEKSWISAYSAANSGITLSKSLISGTIKNGFSLLRPPGHHAGHNRI 132
Query: 162 DGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWG 221
G+C LNN + + N+G K+ +ID DVH+GNGT E FY + +S+H
Sbjct: 133 MGFCMLNNVAITARYLQNNGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----F 187
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P +P G V E G+G+G G NIP+ + ++ Y+ E+VVP +++FEPN++++ G
Sbjct: 188 PFYPMTGLVTETGKGKGIGTTKNIPMQVNSENQAYIQKFKEIVVPTMERFEPNVVLISAG 247
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
D+ DP G +T G+ ++ RI+ ADR G++L EGGY +T
Sbjct: 248 FDAHKEDPLGGMNITTKGFEDLTRIILESADRICNGKVLSFLEGGYDLT 296
>gi|383761811|ref|YP_005440793.1| putative deacetylase [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382079|dbj|BAL98895.1| putative deacetylase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 334
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 151/299 (50%), Gaps = 7/299 (2%)
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA + +L+ HTP Y+ L GG + T +N S+ AAL A G L+ + VL
Sbjct: 20 PAPLEAILAVHTPQYVERLQRIAHNGGGYLDPDTYVNSDSYEAALRAAGGVLNLVDAVLW 79
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYC-FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGT 198
+ALVRPPGHHA G+C F N A A + G +V++ID DVH+GNGT
Sbjct: 80 RQADNGFALVRPPGHHALSYQGMGFCLFANAAIAARWAQRHHGVERVLIIDFDVHHGNGT 139
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ F+ VL S H P +P G+ ELG + +G +N PLP GD+GY+
Sbjct: 140 QDIFFTDPSVLFFSTHQY-----PHYPGTGSATELGMEKAYGATVNAPLPPHVGDKGYLE 194
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
++ P ++F P +I+L G D+ DP L++ GY + V +LAD GR
Sbjct: 195 IFQRVLAPVARRFRPQLILLSAGFDAHWLDPLASMGLSITGYAALVNEVMALADELCDGR 254
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
L+ V EGGYH+ A+ + T + P + +SDP P DE ++I ++ N
Sbjct: 255 LICVLEGGYHLQVLAHSVLTTFRILRGEP-SPVSDPFGPPPGDERPIHQLIGQLRALHN 312
>gi|313127406|ref|YP_004037676.1| deacetylase [Halogeometricum borinquense DSM 11551]
gi|448288120|ref|ZP_21479321.1| deacetylase [Halogeometricum borinquense DSM 11551]
gi|312293771|gb|ADQ68231.1| deacetylase, histone deacetylase/acetoin utilization protein
[Halogeometricum borinquense DSM 11551]
gi|445570159|gb|ELY24725.1| deacetylase [Halogeometricum borinquense DSM 11551]
Length = 338
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 171/336 (50%), Gaps = 35/336 (10%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTGK +HPE +DR++ I L + + + PA
Sbjct: 10 LAHDTGK----------------RHPETADRLRAIRRALAK---RHGVEYVEADPADDAA 50
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK-- 143
+ + H Y++E+ + GG TV + +W AAL++ G A + ++G +
Sbjct: 51 VAAVHEEGYVDEIRSFCEEGGGNWDPDTVASEDTWDAALVSAGLAQWAARAAVEGADERD 110
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAE 200
++L RPPGHHA A G+CF+NNA +A Q ++ +V + D DVH+GNGT +
Sbjct: 111 TPFSLGRPPGHHAVENDAMGFCFINNAAVAAQTVIDDDELDAERVAIFDWDVHHGNGTQD 170
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
FY V SLH G +P G +DE+GEG+G G LN+PL G GD Y +
Sbjct: 171 IFYDRGDVFYASLHE-----GGLYPGTGEIDEIGEGDGEGTTLNVPLEAGAGDADYELVI 225
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+E++ PA+++F+P++I++ G D+ DP R ++ +GY ++ VR++A+ G L
Sbjct: 226 SEVLRPALEQFDPDLIIISAGFDAHRHDPISRMRVSTEGYAQLTDSVRAIANDVDAG-LA 284
Query: 321 IVQEGGY---HVTYSAYCLHATLEGVLNLPLALLSD 353
V EGGY ++ +H T +G P+ + D
Sbjct: 285 FVLEGGYGLDTLSEGVAIVHETFDG--RTPMEIEED 318
>gi|188026416|ref|ZP_02997890.1| hypothetical protein PROSTU_04097 [Providencia stuartii ATCC 25827]
gi|188020005|gb|EDU58045.1| histone deacetylase family [Providencia stuartii ATCC 25827]
Length = 327
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 146/266 (54%), Gaps = 7/266 (2%)
Query: 57 IKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLN 116
++ S++ ++ ++ +S P HT +Y+N+ +E K G +
Sbjct: 51 VRRFKSLIDVSGMNEFLFSYSAPPITYNDAARVHTQEYLNDFIELSKNEGGELGLQAPFG 110
Query: 117 PGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQL 176
PG + ALL+ G +A+ V+DG AYA+ P GHHA P A G +L N+ +A +
Sbjct: 111 PGGYQIALLSAGQAKAAVHQVMDGSLNRAYAVCVPAGHHALPDKAMGATYLANSSIAAKY 170
Query: 177 AL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELG 234
AL N G KV ++D DVH+GNGT FY NKVLTIS+H ++ P N G ++E G
Sbjct: 171 ALENLGAKKVAILDWDVHHGNGTQAIFYNDNKVLTISMHQDN-----CFPINSGGIEEQG 225
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
EG G+N+NIPL G G Y++A+ + +PA++ ++P++I++ G D+S FDP G
Sbjct: 226 NREGLGFNINIPLLPGCGHDEYLYALRTIAIPALRTYKPDLIIIGSGYDASTFDPLGHMQ 285
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLL 320
L YREM + ++A G+ L
Sbjct: 286 LHSQSYREMIESIVAVAQDVCHGKWL 311
>gi|294085328|ref|YP_003552088.1| histone deacetylase/AcuC/AphA family protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664903|gb|ADE40004.1| histone deacetylase/AcuC/AphA family protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 376
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 150/293 (51%), Gaps = 5/293 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H EN D + ++L+ ++ + A ++L HT +++ L AGG
Sbjct: 38 HAENEDTKRRFANLLEISSLADEVIRIKPRVASDDEILRIHTRAHLDRLEALCAAGGGEA 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D T + S+ A LA G ++ + V+ G AY L RPPGHHA+P + G+C L N
Sbjct: 98 GDATPVGVASYDIAKLAAGGVIATVDAVMSGDVDNAYVLCRPPGHHAEPELVTGFCLLAN 157
Query: 170 AGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+ ++ A G ++ V+D DVH+GNG FY +LTIS+H + + P P G
Sbjct: 158 GAIGIEHARQVHGVKRIAVVDYDVHHGNGCETIFYDDPNILTISVHQD--NLFP--PDRG 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+ E G G N+NIPLP G+G Y A +V+P++ +FEP +I + G D+SA D
Sbjct: 214 KLTETGGSHAKGANINIPLPPGSGSGAYAEAFERIVLPSLYRFEPELIFVASGFDASAMD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
P L YR + +R ++++ GR++ EGGY ++ YC A LE
Sbjct: 274 PLAHMMLGAADYRALAGALRKVSEKTCAGRIIFTHEGGYAASHVPYCGLAVLE 326
>gi|325108524|ref|YP_004269592.1| histone deacetylase superfamily protein [Planctomyces brasiliensis
DSM 5305]
gi|324968792|gb|ADY59570.1| histone deacetylase superfamily [Planctomyces brasiliensis DSM
5305]
Length = 322
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 158/295 (53%), Gaps = 13/295 (4%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISW-----HSGIPAQIPQLLSFHTPDYINELVE-AD 102
+HPE R+ I L++G + + S+ H+ A + HT +Y+ +L A
Sbjct: 24 QHPECPQRLAAIDGRLEQGIPAGWESYAPSDEHARSEAVREAIRRLHTEEYLQQLSAFAA 83
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
GGK D TV++ S+ ALLA T + A+K +L G K A+ + RPPGHHA A
Sbjct: 84 HGGGKWDAD-TVVSGESYDVALLAASTAVEAVKAILQGDCKHAFCVTRPPGHHAVAGSAM 142
Query: 163 GYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWG 221
G+C LNNA +A Q A++ +V+++D DVH+GNGT + FY++ +V S H +
Sbjct: 143 GFCLLNNAAIAAQYAIDHFKLNRVLIVDWDVHHGNGTQDLFYKNGEVWYFSSHRH----- 197
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P +P G +E GEG G G N N+PL + T + E++ ++ +P +IV+ G
Sbjct: 198 PYYPGTGLAEETGEGAGVGANCNLPLSSDTPRETILGRFEEVLADFAERCQPELIVISAG 257
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
D+ DP G LT + + V+ LA++Y+ GR+L V EGGY A C+
Sbjct: 258 FDAHQDDPIGSLGLTSEDFGRWTVSVKDLAEKYAQGRILSVLEGGYSPEVLAECV 312
>gi|219850430|ref|YP_002464863.1| histone deacetylase superfamily protein [Chloroflexus aggregans DSM
9485]
gi|219544689|gb|ACL26427.1| histone deacetylase superfamily [Chloroflexus aggregans DSM 9485]
Length = 352
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 162/315 (51%), Gaps = 10/315 (3%)
Query: 34 LFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPD 93
+ D FD L H E++ R++ I L+ + P + A +LL+ H+
Sbjct: 6 VIDQRFD---LHTWHGHVEHAGRLQAIQRALQTSGLLPSLMQLPIRAATEAELLAVHSSH 62
Query: 94 YINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
++ + + GG + T + SW LLA G T++ ++ + +G +ALVRPPG
Sbjct: 63 MLHRVRQLASYGGGQIDSDTYVTADSWDVGLLAAGATIAMVEAIAEGRCHNGFALVRPPG 122
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HHA + G+C NN +A ++ L+ ++ ++D DVH+GNGT + FYR +VL S
Sbjct: 123 HHATDVRSMGFCLFNNIAIAARVLLDRYDIRRLAIVDFDVHHGNGTQDIFYRDGRVLFCS 182
Query: 213 LHMNHGSWGPSHPQNGTVDELGEGE-GFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKF 271
H + P +P G V E G+ G LN+PLP GTGD GY +++ PAI +F
Sbjct: 183 THAS-----PLYPGTGAVYETGDPHMANGTTLNVPLPYGTGDEGYDRVFRQVIGPAIHQF 237
Query: 272 EPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY 331
+P ++++ G D+ DP G L++ G+ + + + + A GR+ V EGGY++
Sbjct: 238 QPEILLVSAGFDAHWSDPIGPMALSVHGFARLVQHLLTWAQTLCNGRIGFVLEGGYNIAA 297
Query: 332 SAYCLHATLEGVLNL 346
+ ATL +L +
Sbjct: 298 LTASVIATLRLMLGM 312
>gi|33329206|gb|AAQ10003.1| S1 self-incompatibility locus-linked G221 protein [Petunia
integrifolia subsp. inflata]
Length = 100
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 89/100 (89%)
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
FDPNGRQCLTM+GYRE+GR VR +AD+YS G+LLIVQEGGYHVTY+AYCLHATLEGV+N+
Sbjct: 1 FDPNGRQCLTMEGYREIGRTVRGIADKYSNGQLLIVQEGGYHVTYAAYCLHATLEGVINV 60
Query: 347 PLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
LLSDP+AYYPEDE+F KV+++IK+YQ +V+ FLK +
Sbjct: 61 SEPLLSDPVAYYPEDESFSNKVVDAIKKYQKEVVSFLKDA 100
>gi|332664865|ref|YP_004447653.1| histone deacetylase superfamily protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332333679|gb|AEE50780.1| histone deacetylase superfamily [Haliscomenobacter hydrossis DSM
1100]
Length = 320
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 166/300 (55%), Gaps = 33/300 (11%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPEN R++ I P + ++ P L H P YI ++ E GG +
Sbjct: 17 HPENKKRLEVFSDI----PETVFLDGE-------PYLELIHDPTYIQQVRETSHLGGHLD 65
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D TV++ GS+ AA AVG T+ AM++ +ALVRPPGHHA A G+C NN
Sbjct: 66 ED-TVVSEGSFMAACHAVGATIQAMRNQ-------DFALVRPPGHHAYRDRASGFCLFNN 117
Query: 170 AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+A QLA+N G KV++ D D H G+GT++ FY SN+V+ S+H P+ P +G
Sbjct: 118 VAIAAQLAVNEG-KKVLIFDFDGHLGDGTSDIFYGSNQVMYWSMHQY-----PAFPGHGF 171
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
V+ELG GEG GY LN+PLP G+ D ++ A+ +P ++F+P+++ + G D+ +D
Sbjct: 172 VNELGAGEGLGYTLNMPLPPGSADDIFLDAVGHF-MPIAEQFQPDIVAVSAGFDAHQYDL 230
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV--LNLP 347
+T + Y +G++ L++ ++ + V EGGY++ C++A G+ LNLP
Sbjct: 231 LLDLKVTTNTYYRIGQL---LSENFA--HVFAVLEGGYNIPELQKCVYAFEAGINGLNLP 285
>gi|448407831|ref|ZP_21574026.1| histone deacetylase superfamily protein [Halosimplex carlsbadense
2-9-1]
gi|445675081|gb|ELZ27616.1| histone deacetylase superfamily protein [Halosimplex carlsbadense
2-9-1]
Length = 338
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 162/332 (48%), Gaps = 31/332 (9%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+N + + L HDTGK +HPE+ DR++ I L Y+S
Sbjct: 1 MNFGYREACLEHDTGK----------------RHPESPDRLRAIRQGLSECHGVRYVSPE 44
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
A + Q+ + H DY+ + + GG TV +W AAL A G
Sbjct: 45 D---ATVEQVAAVHDADYVQSVEDFCADGGGDWDADTVAVEATWDAALAASGMANWVADE 101
Query: 137 VLDGHG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVH 193
LDG +AL RPPGHHA A G+CF N+ +A Q A++ G +V ++D DVH
Sbjct: 102 ALDGSNGRDTTFALGRPPGHHAVYDDAMGFCFFNHVAVAAQHAIDDGGADRVAILDWDVH 161
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
+GNGT + F V +S+H + +P G E+G G+ G +N+P P GT
Sbjct: 162 HGNGTQDIFDDREDVFFVSIHED-----GIYPGTGDATEIGTGDARGTTMNVPFPPGTTT 216
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
GY+ A+ +L+VPA + F+P+++++ G D+ DP R ++ +GY + + V + ADR
Sbjct: 217 SGYLAAVDDLIVPAFEAFDPDLVLVSAGFDAHEHDPISRMRVSTEGYGLLAQRVDAFADR 276
Query: 314 YSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
G L V EGGY +T S +H +G
Sbjct: 277 IGAG-LGFVLEGGYGLDTLTESVRTVHEVFDG 307
>gi|24213615|ref|NP_711096.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|386073219|ref|YP_005987536.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
gi|24194411|gb|AAN48114.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|353457008|gb|AER01553.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
Length = 313
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 149/282 (52%), Gaps = 10/282 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H ENSDR+ ++ L + S + +P + L H+ ++I ++ + G
Sbjct: 22 HYENSDRLLACLNRLHQSSYFNSLFFPEMKKLPNEF--LNEIHSQNHIQKIENSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW +A A + + + ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWISAYSAANSGIILSEFLISGTIKNGFSLLRPPGHHAEHNRIMGFCML 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + N+G K+ +ID DVH+GNGT E FY + +S+H P +P
Sbjct: 139 NNVAITARYLQNNGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+G+G G NIP+ +GD+ Y+ E++VP +++FEP+++++ G D+
Sbjct: 194 GLATETGKGKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKN 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP G +T G+ ++ RI+ AD+ G++L EGGY++
Sbjct: 254 DPLGGMNITTKGFEDLTRIILESADKICSGKVLSFLEGGYNL 295
>gi|320353627|ref|YP_004194966.1| histone deacetylase superfamily protein [Desulfobulbus propionicus
DSM 2032]
gi|320122129|gb|ADW17675.1| histone deacetylase superfamily [Desulfobulbus propionicus DSM
2032]
Length = 364
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 22/304 (7%)
Query: 25 MLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIP 84
L H+TG+G H E+ R++ I L R ++ + + PA +
Sbjct: 17 FLAHETGRG----------------HVESPQRLQCIYRELDRPEVAAQLLFPEFGPAPVS 60
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
+ H+ + I E+ + T + S+ AALLA G + + + G
Sbjct: 61 AIALNHSDELIREVAATAGHAAFYLDADTRTSAASYEAALLAAGAVIDGINRLARGEIDN 120
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFY 203
+ LVRPPGHHA+ A G+C NN + + A G +++++D D+H+GNGT FY
Sbjct: 121 GFCLVRPPGHHAERDQAMGFCLFNNVAVGARWARKHLGLERILLLDWDLHHGNGTQHSFY 180
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
R VL S+H P +P +G V E+GEG G GY +N+PL +G GD Y + ++
Sbjct: 181 RDPSVLYCSIHQY-----PCYPGSGAVGEVGEGPGLGYTINVPLCSGHGDAEYARILNQM 235
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
V P + + P +I++ G D A DP G LT G M R + LA RLL+V
Sbjct: 236 VAPLVHGYRPELILVSCGFDCMAGDPLGAMRLTATGIASMTRTLVELAAEVCDNRLLLVL 295
Query: 324 EGGY 327
EGGY
Sbjct: 296 EGGY 299
>gi|367000379|ref|XP_003684925.1| hypothetical protein TPHA_0C03390 [Tetrapisispora phaffii CBS 4417]
gi|357523222|emb|CCE62491.1| hypothetical protein TPHA_0C03390 [Tetrapisispora phaffii CBS 4417]
Length = 701
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 178/347 (51%), Gaps = 35/347 (10%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + P ++ S I A ++L
Sbjct: 70 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPSLTGVSDIGDLMLKIPVREATKEEILDV 129
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ L +K + + D LN S+ +A L+ G + A K V++G K
Sbjct: 130 HTEEHMQFLESTEKMTREELLSKTEKGDSVYLNNDSYISARLSCGGAIEACKAVVEGRVK 189
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A+VRPPGHHA+P A G+C +N +A + L + K++++D D+H+GNGT +
Sbjct: 190 NALAIVRPPGHHAEPQAAGGFCLFSNVSVAAKSILKTYPESVRKILIVDWDIHHGNGTQK 249
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY + VL ISLH G + P P+ G D++G+G+G G+N NI P G GD Y+
Sbjct: 250 AFYEDDNVLYISLHRFELGKFYPGFPE-GNYDKVGDGKGKGFNCNITWPVKGVGDVEYIW 308
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F P+++++ G D++ D G+ +T + Y M +++SLA G
Sbjct: 309 AFEQIVIPMAREFRPDLVIVSSGFDAAHGDTIGQCHVTPNCYGYMTHMLKSLA----RGN 364
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFP 365
L +V EGGY+ L + L + L+ +P PE + P
Sbjct: 365 LCVVLEGGYN-------LDSISNSALAVAKILIGEPPDEIPESDRDP 404
>gi|289549122|ref|YP_003474110.1| histone deacetylase [Thermocrinis albus DSM 14484]
gi|289182739|gb|ADC89983.1| Histone deacetylase [Thermocrinis albus DSM 14484]
Length = 309
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 9/311 (2%)
Query: 37 TGF--DPGFLEVLEK-HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPD 93
TGF D +LE + HPEN DR+ I+ L+ + + A + ++ H
Sbjct: 3 TGFLYDDIYLEHNNRGHPENKDRLIAIMQGLESRRLFQKVVKVRPRRATVQEVSLNHDLA 62
Query: 94 YINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
YI E+ + AGG + T N S+ AL AVG L + +L+G + + VRPPG
Sbjct: 63 YIQEIHDFCAAGGGYLDPDTYANAMSYEVALYAVGGVLEGIDRLLNGELEAVFCAVRPPG 122
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ + A G+C NN + +N G KV +ID D H+GNGT FY ++V S
Sbjct: 123 HHAERSKAMGFCIFNNVAVGAHYLINRGIKKVFIIDFDAHHGNGTQRSFYEDDRVFYFST 182
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H P +P G+ DE G G G+G+ N+P+ G GD Y+ E++ ++ F+P
Sbjct: 183 HEY-----PFYPGTGSADERGAGRGYGFTYNVPMKAGAGDEEYLRVYKEILPALVKDFKP 237
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+++ G D DP +T +G RE+ + +++ S LL+ EGGY++ +
Sbjct: 238 EFLLVSAGYDLHKDDPLTYLDVTTEGIREIVSSIVNVSKALSIP-LLLALEGGYNLRVLS 296
Query: 334 YCLHATLEGVL 344
C+ TLE +L
Sbjct: 297 ECVADTLEILL 307
>gi|56749066|sp|Q70I53.3|HDAH_ALCSD RecName: Full=Histone deacetylase-like amidohydrolase;
Short=HDAC-like amidohydrolase; Short=HDAH
gi|37496190|emb|CAE45336.1| histone deacetylase-like amidohydrolase [Alcaligenaceae bacterium
FB188]
Length = 369
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 13/304 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADK--AGGK 107
HP+ R +V G I +++ + + A +L H+ ++ + GG
Sbjct: 39 HPDTKRRFHELVC--ASGQIE-HLTPIAAVAATDADILRAHSAAHLENMKRVSNLPTGGD 95
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T++ G A L+ G + + V G YALV PPGHHA A G+C
Sbjct: 96 TGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNAAMGFCIF 155
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A A G +V ++D DVH+GNGT + ++ VLTISLH H + P
Sbjct: 156 NNTSVAAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLH-QHLCFPP---D 211
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G E G G G GYN+N+PLP G+G+ Y+HAM ++V+ A++ + P +I++ G D+S
Sbjct: 212 SGYSTERGAGNGHGYNINVPLPPGSGNAAYLHAMDQVVLHALRAYRPQLIIVGSGFDASM 271
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE---GV 343
DP R +T DG+R+M R A GR++ VQEGGY Y +C A +E GV
Sbjct: 272 LDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYSPHYLPFCGLAVIEELTGV 331
Query: 344 LNLP 347
+LP
Sbjct: 332 RSLP 335
>gi|433639734|ref|YP_007285494.1| deacetylase, histone deacetylase/acetoin utilization protein
[Halovivax ruber XH-70]
gi|433291538|gb|AGB17361.1| deacetylase, histone deacetylase/acetoin utilization protein
[Halovivax ruber XH-70]
Length = 337
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 152/302 (50%), Gaps = 18/302 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE R+ +I R +S+ PA + + + H P Y+ E D GG+
Sbjct: 17 RHPEAPTRLD---AIRDRLASVHGVSYVESDPAPVETIEAVHDPAYVEEFRSFCDDGGGE 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH--GKIAYALVRPPGHHAQPTMADGYC 165
D + + +W AAL + G A L G K +++ RPPGHHA A G+C
Sbjct: 74 WDPDTSAVE-ATWDAALQSAGLACWAADEALAGEVGRKTPFSIGRPPGHHAVADDAMGFC 132
Query: 166 FLNNAGLAVQLALNS--GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
F NN +A Q A++ G +V ++D DVH+GNGT + FY V S+H +
Sbjct: 133 FFNNVAVAAQHAIDDDGGADRVAIVDWDVHHGNGTQDLFYDREDVFFASIHEDG-----L 187
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G VDE GEG G G +N+P+P+ D Y+ EL+ PA++ F+P++++L G D
Sbjct: 188 YPGTGEVDETGEGAGEGTTMNVPMPDSATDAAYLAVFDELLGPALRDFDPDLLLLSAGFD 247
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHATL 340
+ DP R LT + Y M RS+A+ G L +V EGGY + S +H T
Sbjct: 248 AHRHDPISRVRLTTEAYALMADRARSIAESVDAG-LAVVLEGGYSLDVLADSVALVHETF 306
Query: 341 EG 342
+G
Sbjct: 307 DG 308
>gi|398339945|ref|ZP_10524648.1| acetoin-histone deacetylase [Leptospira kirschneri serovar Bim str.
1051]
gi|421130519|ref|ZP_15590713.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
gi|410358218|gb|EKP05399.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
Length = 347
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 156/298 (52%), Gaps = 11/298 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H ENSDR+ ++ L + S + P + L H+ ++I ++ + G
Sbjct: 56 HYENSDRLLACLNKLHQSSYFGSLFFPEMKKFPNEF--LNEIHSKNHIQKIENSKGKRGY 113
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW +A A + + + ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 114 FDSD-TPFTEKSWISAYSAANSGIILSESLISGTIKNGFSLLRPPGHHAEHNRIMGFCML 172
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + N+G K+ +ID DVH+GNGT E FY + +S+H P +P
Sbjct: 173 NNVAITARYLQNNGYKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----FPFYPMT 227
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G + E G+G+G G NIP+ + ++ Y+ E+VVP +++F+P+++++ G D+
Sbjct: 228 GLITETGKGKGIGTTKNIPMQANSENQAYIQKFKEIVVPTMERFDPDIVLISAGFDAHKD 287
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
DP G +T G+ ++ RI+ ADR GG++L EGGY +T + + A + VLN
Sbjct: 288 DPLGGMNVTTKGFEDLTRIILESADRICGGKVLSFLEGGYDLTALSESVEAHI-AVLN 344
>gi|163797262|ref|ZP_02191216.1| probable acetylpolyamine aminohydrolase [alpha proteobacterium
BAL199]
gi|159177557|gb|EDP62111.1| probable acetylpolyamine aminohydrolase [alpha proteobacterium
BAL199]
Length = 361
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 130/225 (57%), Gaps = 9/225 (4%)
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
KAG + PG+W A + ++A ++ G+ AYAL RPPGHHA A
Sbjct: 125 KAGHYQTDTACPIGPGTWTGARASADVAVTAAD-LVTSDGRPAYALCRPPGHHAYADQAG 183
Query: 163 GYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
G+CFLNN+ +A Q + G +V V+D+DVH+GNGT FYR N V T+S+H + ++ P
Sbjct: 184 GFCFLNNSAIAAQRLRDGGAKRVTVLDVDVHHGNGTQGIFYRRNDVQTVSIHGDPHAYYP 243
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+ G DE+G G G G NLN+PLP GTGD GY+ + + + AI F+P+ +V+ +G
Sbjct: 244 FY--TGYSDEIGAGPGRGANLNLPLPRGTGDAGYLETL-DTALTAIDAFKPDAVVVALGL 300
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D S DP +T DG+R +G R A Y LIVQEGGY
Sbjct: 301 DPSEKDPLAFLSVTTDGFRRIGE--RLGATPYP---TLIVQEGGY 340
>gi|33329208|gb|AAQ10004.1| S2 self-incompatibility locus-linked G221 protein, partial [Petunia
integrifolia subsp. inflata]
Length = 100
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 88/100 (88%)
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
FDPNGRQCLTM+GYRE+GR VR +AD+YS GRLLIVQEGGYHVTY+AYCLHATLEGV+N+
Sbjct: 1 FDPNGRQCLTMEGYREIGRTVRGIADKYSNGRLLIVQEGGYHVTYAAYCLHATLEGVINV 60
Query: 347 PLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
LLSDP+AYYPEDE+F KV+++IK+YQ + + FLK +
Sbjct: 61 SEPLLSDPVAYYPEDESFSNKVVDAIKKYQKEEVSFLKDA 100
>gi|418677399|ref|ZP_13238675.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400322347|gb|EJO70205.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 347
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H ENSDR+ ++ L + S + P + L H+ ++I ++ + G
Sbjct: 56 HYENSDRLLACLNKLHQSSYFGSLFFPEMKKFPNEF--LNEIHSKNHIQKIENSKGKRGY 113
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW +A A + + + ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 114 FDSD-TPFTEKSWISAYSAANSGIILSESLISGTIKNGFSLLRPPGHHAEHNRIMGFCML 172
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + N+G K+ +ID DVH+GNGT E FY + +S+H P +P
Sbjct: 173 NNVAITARYLQNNGYKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----FPFYPMT 227
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G + E G+G+G G NIP+ + ++ Y+ E+VVP +++F+P+++++ G D+
Sbjct: 228 GLITETGKGKGIGTTKNIPMQANSENQAYIQKFKEIVVPTMERFDPDIVLISAGFDAHKD 287
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ RI+ ADR GG++L EGGY +T
Sbjct: 288 DPLGGMNVTTKGFEDLTRIILESADRICGGKVLSFLEGGYDLT 330
>gi|312136626|ref|YP_004003963.1| histone deacetylase [Methanothermus fervidus DSM 2088]
gi|311224345|gb|ADP77201.1| Histone deacetylase [Methanothermus fervidus DSM 2088]
Length = 346
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 156/305 (51%), Gaps = 19/305 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H EN +R + I++IL I ++ + A+I L H YIN + E K GG +
Sbjct: 17 HIENKNRTEAILNILHEKGIIKHLEVYKPKRAKIDDLKKVHELHYINYIKEFCKKGGGYL 76
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T ++ A LA G + A K +++G K Y++ RPPGHHA A G+C NN
Sbjct: 77 DFDTYATSYTYDVASLAAGGAIEASKLIING-KKWVYSISRPPGHHATKNKAMGFCIFNN 135
Query: 170 AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+ ++ L + +++D D+HYGNGTAE +Y VL IS+H + + PS G
Sbjct: 136 LAIGLE-NLRNKFKNFLILDFDLHYGNGTAEIYYEDPSVLYISIHQDPKTIFPS---CGF 191
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
+DE+G+ EG GYN+NIP+P + D Y+ ++E++ P I F+P +I++ G D+ DP
Sbjct: 192 IDEIGKNEGEGYNINIPMPPNSDDNDYIWILSEIIPPIIDDFKPEIILIEAGFDAHKRDP 251
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
G LT Y + + +R ++ V EGGY++ Y NL
Sbjct: 252 LGSINLTEKFYAWIAKFLRKF-----NLPIMCVLEGGYNLKALKYS---------NLMFI 297
Query: 350 LLSDP 354
L S+P
Sbjct: 298 LYSNP 302
>gi|359491637|ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
gi|297733877|emb|CBI15124.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 196/379 (51%), Gaps = 36/379 (9%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +DD M H T G DP HPEN DRI+ I L+ I
Sbjct: 14 VGLVYDDRMCEHATADG------DP--------HPENPDRIRAIWKKLESAGIPQRCVVF 59
Query: 77 SGIPAQIPQLLSFHTPDYINELV-----EADKAGGKMVC--DGTVLNPGSWGAALLAVGT 129
+ A+ +LS H+ +++N + + D ++ + +N GS AA LA G+
Sbjct: 60 NAKEAEDKHILSVHSNNHVNLIKNISSKQFDSRRNRIASKFNSIYMNEGSSEAAYLAAGS 119
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS--GCGKVVV 187
+ + V G A+A+VRPPGHHA+ G+C NN +A LN K+++
Sbjct: 120 VIEVAERVAKGELSSAFAIVRPPGHHAEQNEPMGFCLYNNVAIATSFLLNERPDIKKILI 179
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D DVH+GNGT + F++ +VL S+H + GS+ P++ + G GEG G GYN+N+P
Sbjct: 180 VDWDVHHGNGTQKMFWKDPRVLFFSVHRHEFGSFYPANDE-GFYAMTGEGPGAGYNINVP 238
Query: 247 LPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
NG GD Y+ +++P + F P+++++ G D++ DP G +T GY M
Sbjct: 239 WENGRCGDADYLAVWDHILIPVAKDFNPDIVIISAGFDAAIGDPLGGCHVTPYGYSVM-- 296
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL-NLPLALLSDPIAYYPEDEAF 364
++ L + +S G++++ EGGY++ A + A +E +L + P+A S+ YP + +
Sbjct: 297 -LKKLME-FSEGKIIMALEGGYNLVSLANSVLACVEVLLEDKPIAGSSEA---YPFESTW 351
Query: 365 PVKVIESIKQYQNDVIPFL 383
+VI++++Q + P L
Sbjct: 352 --RVIQAVRQELSAFWPTL 368
>gi|20094491|ref|NP_614338.1| deacetylase [Methanopyrus kandleri AV19]
gi|19887593|gb|AAM02268.1| Predicted deacetylase [Methanopyrus kandleri AV19]
Length = 352
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 149/283 (52%), Gaps = 6/283 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPY--ISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
HPE +R+ V + + I P + H P+++ + ++GG
Sbjct: 18 HPERRERLSYTVDRFEEEGLFEIEGIDLVEPDPVDREVIELVHDPEHVELIRRMSESGGG 77
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
M+ T + P ++ ALLA G ++ A++ V+ G A+A+VRPPGHHA A G+C+
Sbjct: 78 MIDLDTAVAPETYDQALLAAGGSVLAVELVVRGEYDTAFAMVRPPGHHAGRAKAAGFCYF 137
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NNA +A + A+ G V ++D D H+G+GT E FY + VL +S+H + + +P
Sbjct: 138 NNAAIAAEYAIRELGVDSVAILDWDAHHGDGTQEIFYDRDDVLYVSIHQDGRTL---YPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E GEG G GY +NIP+ +GDR Y A +V P +++F+P++I++ GQD
Sbjct: 195 TGFPYEAGEGPGEGYTVNIPVLPRSGDRTYREAFQRIVEPVVREFDPDLILISAGQDCHF 254
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP +T +GYR M + LA+ + V EGGY V
Sbjct: 255 TDPITDLAVTAEGYRWMMQRATELAEDLGASGPVAVLEGGYSV 297
>gi|419968520|ref|ZP_14484360.1| histone deacetylase superfamily protein [Rhodococcus opacus M213]
gi|414566075|gb|EKT76928.1| histone deacetylase superfamily protein [Rhodococcus opacus M213]
Length = 374
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 157/303 (51%), Gaps = 14/303 (4%)
Query: 35 FDTGFDPGFLE------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLS 88
FD G D G + +KH + + ++ ++L+ + ++ + A +L
Sbjct: 16 FDLGHDAGLVHPDGMTIQPDKHVYDLEVVRRFRNLLEVSGLLDQLTKVAPRHATEAELTR 75
Query: 89 FHTPDYINELVEADKAGGKMVCDGTVLNP---GSWGAALLAVGTTLSAMKHVLDGHGKIA 145
H +Y+ E+ + +V P G++ A LA G ++A++ V++G A
Sbjct: 76 VHPAEYVEEVRALSELPMGGEGKSSVFAPVPRGAFEIASLAAGGAIAAVEAVVNGEVDNA 135
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYR 204
YAL+RP GHHA+P + G+C +NA +A + L+ G +V +ID DVH+GNGT Y
Sbjct: 136 YALLRPAGHHAEPDRSMGFCIFSNAAIAARHLLDECGVNRVALIDWDVHHGNGTQASLYD 195
Query: 205 SNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
+ LTIS+H + P +G VD++G G G NLNIPLP G Y +V
Sbjct: 196 DPRALTISVHQDR----LFPPDDGFVDQIGVGAAEGTNLNIPLPAGCTSAAYNEVYDRVV 251
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
+PA++ F P +I++ G D+ DP GR + GYRE+ R + AD GGR++ + E
Sbjct: 252 IPALETFRPEIIIVPSGFDAGHMDPMGRMLMHSQGYRELTRKLMKAADDLCGGRMVFLHE 311
Query: 325 GGY 327
GGY
Sbjct: 312 GGY 314
>gi|45658561|ref|YP_002647.1| acetoin-histone deacetylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417761510|ref|ZP_12409519.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|417775766|ref|ZP_12423615.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|417784566|ref|ZP_12432272.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|418674690|ref|ZP_13235989.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|418701546|ref|ZP_13262471.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418729578|ref|ZP_13288125.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|421085449|ref|ZP_15546302.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|421103681|ref|ZP_15564278.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45601805|gb|AAS71284.1| acetoin- histone deacetylase family [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|409942591|gb|EKN88199.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|409952383|gb|EKO06896.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|410366644|gb|EKP22035.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432085|gb|EKP76443.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|410574414|gb|EKQ37447.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|410578349|gb|EKQ46211.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|410759628|gb|EKR25840.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410775756|gb|EKR55747.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|455791354|gb|EMF43170.1| histone deacetylase family protein [Leptospira interrogans serovar
Lora str. TE 1992]
gi|456824751|gb|EMF73177.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. LT1962]
gi|456982662|gb|EMG19194.1| histone deacetylase family protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 313
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 147/280 (52%), Gaps = 10/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H ENSDR+ ++ L + S + +P + L H+ ++I ++ + G
Sbjct: 22 HYENSDRLLACLNRLHQSSYFNSLFFPEMKKLPNEF--LNEIHSQNHIQKIENSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW +A A + + + ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWISAYSAANSGIILSEFLISGTIKNGFSLLRPPGHHAEHNRIMGFCML 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + N+G K+ +ID DVH+GNGT E FY + +S+H P +P
Sbjct: 139 NNVAITARYLQNNGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+G+G G NIP+ +GD+ Y+ E++VP +++FEP+++++ G D+
Sbjct: 194 GLATETGKGKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKN 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T G+ ++ RI+ AD+ G++L EGGY
Sbjct: 254 DPLGGMNITTKGFEDLTRIILESADKICSGKVLSFLEGGY 293
>gi|417766121|ref|ZP_12414075.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|418670332|ref|ZP_13231703.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418689537|ref|ZP_13250658.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|418710471|ref|ZP_13271242.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418725219|ref|ZP_13283895.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|421128071|ref|ZP_15588289.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421133453|ref|ZP_15593601.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|400351575|gb|EJP03794.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400361216|gb|EJP17183.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|409961601|gb|EKO25346.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|410022461|gb|EKO89238.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410434538|gb|EKP83676.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410753714|gb|EKR15372.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410769407|gb|EKR44649.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456971347|gb|EMG11975.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 313
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 147/280 (52%), Gaps = 10/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H ENSDR+ ++ L + S + +P + L H+ ++I ++ + G
Sbjct: 22 HYENSDRLLACLNRLHQSSYFNSLFFPEMKKLPNEF--LNEIHSQNHIQKIENSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW +A A + + + ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWISAYSAANSGIILSEFLISGTIKNGFSLLRPPGHHAEHNRIMGFCML 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + N+G K+ +ID DVH+GNGT E FY + +S+H P +P
Sbjct: 139 NNVAITARYLQNNGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+G+G G NIP+ +GD+ Y+ E++VP +++FEP+++++ G D+
Sbjct: 194 GLATETGKGKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKN 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T G+ ++ RI+ AD+ G++L EGGY
Sbjct: 254 DPLGGMNITTKGFEDLTRIILESADKICSGKVLSFLEGGY 293
>gi|335423408|ref|ZP_08552430.1| histone deacetylase superfamily protein [Salinisphaera shabanensis
E1L3A]
gi|334891989|gb|EGM30234.1| histone deacetylase superfamily protein [Salinisphaera shabanensis
E1L3A]
Length = 368
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 163/314 (51%), Gaps = 12/314 (3%)
Query: 44 LEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADK 103
+E +PE+ R+ + +L+ PI+ + +G PA QL HT Y+ L E +
Sbjct: 44 VEAKWSYPEHPGRVIAVRELLEAEPIAG-VRITTGQPATREQLSRVHTTSYLENLHELEG 102
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ D T ++ GS AA +A G+T++A+ V + + A+ + RPPGHHA A G
Sbjct: 103 KQAWLDVDTTAVSAGSLEAAEVAAGSTIAAVDAVFEKKVQSAFVICRPPGHHANAVRARG 162
Query: 164 YCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C NN +A A +V++ID D H+GNGT + F V+ H P
Sbjct: 163 FCLFNNIAVAAAHAQFQWDIERVLIIDWDAHHGNGTQDIFDADPSVMFFDTHRA----AP 218
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P G ++E+GEG G G +N+PLP GD ++A ++VPA++ F+P +I++ G
Sbjct: 219 FYPGTGDMEEIGEGLGEGTTVNVPLPEDAGDLAIINAFENILVPAVEWFKPELILVSAGM 278
Query: 283 DSSAFDPNGRQCLTM--DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
D+ CL M DGY M IV+ LAD+Y GRL++ EGGY+ A C H L
Sbjct: 279 DAH----RTELCLNMSYDGYSAMAGIVQRLADQYCDGRLVMALEGGYNPDTLARCTHRVL 334
Query: 341 EGVLNLPLALLSDP 354
E + A + +P
Sbjct: 335 EVMAGAAPATVREP 348
>gi|334188535|ref|NP_001190583.1| histone deacetylase 5 [Arabidopsis thaliana]
gi|332010035|gb|AED97418.1| histone deacetylase 5 [Arabidopsis thaliana]
Length = 664
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 186/376 (49%), Gaps = 42/376 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G E HPE DRI+ I L+ +S
Sbjct: 27 VGLIYDETMCKHDTPDG--------------EDHPECPDRIRVIWEKLQLAGVSQRCVVL 72
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGK--------MVCDGTVLNPGSWGAALLAVG 128
A+ L HT D++N LV++ K + LN GS AA LA G
Sbjct: 73 GSSKAEDKHLQLVHTKDHVN-LVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAG 131
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V +G +A+VRPPGHHA+ A G+C NN +A LN G K
Sbjct: 132 SVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKK 191
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D DVH+GNGT + F++ +VL S+H + +G + P+ +G + +GEG G G+N+
Sbjct: 192 ILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAG-DDGDYNMVGEGPGEGFNI 250
Query: 244 NIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P G GD Y+ A +++P ++F P++I L G D++ DP G C+T GY
Sbjct: 251 NVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSV 310
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHV----TYSAYCLHATLEGVLNLPLALLSDPIAYY 358
M + V ++ G++++ EGGY++ S C+ LE + P Y
Sbjct: 311 MLKKVGVELMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLED------KQIQGPPEAY 364
Query: 359 PEDEAFPVKVIESIKQ 374
P + + +VI+++++
Sbjct: 365 PFESTW--RVIQAVRK 378
>gi|417772111|ref|ZP_12420001.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|418680417|ref|ZP_13241666.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|418707007|ref|ZP_13267844.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|400327775|gb|EJO80015.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|409946068|gb|EKN96082.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|410763358|gb|EKR34088.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|455667658|gb|EMF32954.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Fox 32256]
Length = 313
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSF--------HTPDYINELVEA 101
H ENSDR+ ++ L R S Y + P++ F H+ ++I ++ +
Sbjct: 22 HYENSDRL---LACLNRLHQSSYFN-----SLFFPEMKKFPNEFLNEIHSQNHIQKIENS 73
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
G D T SW +A A + + + ++ G K ++L+RPPGHHA+
Sbjct: 74 KGKRGYFDSD-TPFTEKSWISAYSAANSGIILSEFLISGTIKNGFSLLRPPGHHAEHNRI 132
Query: 162 DGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWG 221
G+C LNN + + N+G K+ +ID DVH+GNGT E FY + +S+H
Sbjct: 133 MGFCMLNNVAITARYLQNNGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----F 187
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P +P G E G+G+G G NIP+ +GD+ Y+ E++VP +++FEP+++++ G
Sbjct: 188 PFYPMTGLATETGKGKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAG 247
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP G +T G+ ++ RI+ AD+ G++L EGGY
Sbjct: 248 FDAHKNDPLGGMNITTKGFEDLTRIILESADKICSGKVLSFLEGGY 293
>gi|321460654|gb|EFX71695.1| hypothetical protein DAPPUDRAFT_308757 [Daphnia pulex]
Length = 357
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 167/314 (53%), Gaps = 21/314 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E RI ++ L+ + A +LL HT DY++EL + ++
Sbjct: 12 HLEQPARITSVYQKLQESGVLDRCLQLDARIATREELLWLHTADYVDELSATSEKKQSIL 71
Query: 110 C------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D L P ++ AALL+ G++L ++ +L G + +A++RPPGHHA+ A G
Sbjct: 72 TALERQYDSVFLCPETYQAALLSAGSSLQVVESILSGESRSGFAVIRPPGHHAESDEAFG 131
Query: 164 YCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ NN LA + A+ N +++++D D+H+GNG + F +VL ISLH P
Sbjct: 132 FCYFNNTALAAKYAIENHQLERILIVDWDIHHGNGIQKMFEEDPRVLYISLH--RLDIFP 189
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
+P+N + +G G G G+N+NI P+ G GD Y+ A +++P ++ P ++++ G
Sbjct: 190 FNPENCDCNMVGTGPGVGFNVNIAWPSKGMGDSEYLAAFRRIIMPIANQYNPQLVLVAAG 249
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
D++ DP G ++ +GY +M ++ SLA+ GR+ ++ EGGY+ L + +
Sbjct: 250 FDAALGDPLGGCKVSPEGYGQMCHMLTSLAE----GRVAVLLEGGYN-------LKSVSD 298
Query: 342 GVLNLPLALLSDPI 355
+L ALL DP+
Sbjct: 299 SMLMCANALLGDPL 312
>gi|288818692|ref|YP_003433040.1| acetoin utilization protein [Hydrogenobacter thermophilus TK-6]
gi|384129443|ref|YP_005512056.1| histone deacetylase superfamily protein [Hydrogenobacter
thermophilus TK-6]
gi|288788092|dbj|BAI69839.1| acetoin utilization protein [Hydrogenobacter thermophilus TK-6]
gi|308752280|gb|ADO45763.1| histone deacetylase superfamily [Hydrogenobacter thermophilus TK-6]
Length = 309
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 10/301 (3%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
+ HPEN DR+ +IV L R I ++ A++ ++ H P YI E+ + AGG
Sbjct: 17 KNHPENMDRLISIVQGLDRNRILKHVERIKPRRAKVEEVAFNHDPTYIQEVHDFCSAGGG 76
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ T S+ AL AVG L + +L G + + +RPPGHHA+ + A G+C
Sbjct: 77 YLDPDTYAVAESYEVALYAVGGVLEGIDALLSGELETVFCAIRPPGHHAEYSKAMGFCLF 136
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + LN G +V +ID D H+GNGT + FY ++V S H P +P
Sbjct: 137 NNVAVGAWYLLNKGFKRVFIIDFDAHHGNGTQKSFYEEDRVFYFSTHEY-----PFYPGT 191
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G+ E G G+G GY N+PL G GD Y L+ ++++EP +++ G D
Sbjct: 192 GSDKERGAGKGLGYTYNVPLNAGAGDEEYESIYGSLLPKLMKEYEPQFVLISAGYDIHKD 251
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHVTYSAYCLHATLEGVLN 345
DP ++ G R IV+S+ S + L EGGY++ A C+ AT+E +L
Sbjct: 252 DPLTYLNVSTQGVR---NIVKSILITCSELNVPSLFALEGGYNLKALAECVSATMEIMLE 308
Query: 346 L 346
+
Sbjct: 309 V 309
>gi|407787578|ref|ZP_11134718.1| histone deacetylase family protein [Celeribacter baekdonensis B30]
gi|407199278|gb|EKE69298.1| histone deacetylase family protein [Celeribacter baekdonensis B30]
Length = 368
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 3/292 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H ++ D + + S++ ++ + P +L H Y+ AGG +
Sbjct: 38 HADSPDPKRRLKSLMDVSGLTQAFDVKTAAPLTDAELQRIHPKSYLEAFKAMSDAGGGAL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G A+ V +G + AYA+ RP GHH P G+C N
Sbjct: 98 HPTAPFSGGSYEIAALSAGLVSRAVLDVAEGACQRAYAISRPSGHHCLPDTPMGFCMFAN 157
Query: 170 AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+AV+ A +G G++ V+D DVH+GNGT FY VLTIS+H + P +G
Sbjct: 158 VAIAVRSAQEAGIGRIAVLDWDVHHGNGTEACFYDDPTVLTISMH-QEACFPPG--SSGA 214
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
V+ GEG G G N+N+P+ G G Y++A +V P+I +F P MI++V G D++ DP
Sbjct: 215 VEAAGEGAGIGANVNVPIWPGAGHAAYLYAFERIVAPSITEFAPEMIIVVNGLDANGVDP 274
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
R + +R + + V +L++ GRL+IVQEGGY +Y +C A LE
Sbjct: 275 LARMLAHSETFRALTKSVMALSEVLCEGRLVIVQEGGYAESYVPFCALAVLE 326
>gi|435851061|ref|YP_007312647.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanomethylovorans hollandica DSM 15978]
gi|433661691|gb|AGB49117.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanomethylovorans hollandica DSM 15978]
Length = 636
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 141/269 (52%), Gaps = 9/269 (3%)
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA LL H+ DYI + +GG + D T + ++ A LAVG+ + A + VL
Sbjct: 336 PASEEDLLLVHSNDYIRFVRSYSASGGGFLGDSTYMTSETFEVARLAVGSAIKAGELVLS 395
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNN-AGLAVQLALNSGCGKVVVIDIDVHYGNGT 198
G A ++RPPGHHA G+C NN A LA L G K+++ID D H G+GT
Sbjct: 396 GQYAAAMVMIRPPGHHASVDKYRGFCIFNNVAVLARYLQKKKGLSKIMIIDWDAHAGDGT 455
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
E FY V+ +SLH + + +P+ G ++GEG G GY +N+ +P G GD Y
Sbjct: 456 MEIFYNDPTVMFVSLHRDPYDF---YPRRGFSSQIGEGPGLGYTVNVEIPVGAGDEEYAF 512
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ELV+P + F P+ ++ G D+ + + + LT GY M + + S + G
Sbjct: 513 AFDELVIPLLHNFSPDFVICSCGFDAYYKEQHIKLNLTSAGYHMMTQKIMSAIN----GN 568
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
++V EGGYH ++ + H + +L+LP
Sbjct: 569 FVLVMEGGYH-KFNGHLTHVVINSLLDLP 596
>gi|255718405|ref|XP_002555483.1| KLTH0G10340p [Lachancea thermotolerans]
gi|238936867|emb|CAR25046.1| KLTH0G10340p [Lachancea thermotolerans CBS 6340]
Length = 708
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 191/373 (51%), Gaps = 42/373 (11%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S I A ++L
Sbjct: 76 SYFEYIDPHPEDPRRIYRIYKILAENGLIDDPTLSGVDSIGDLMLKIPVREATDEEILQV 135
Query: 90 HTPDYI-----------NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
HT +++ ++L++ + G D N S+ +A L+ G + A K V+
Sbjct: 136 HTKEHLEFISKTTSMTRDQLLKETEKG-----DSVYFNNDSYLSAKLSCGGAIEACKAVV 190
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYG 195
+G K A A+VRPPGHHA+P +A G+C +N +A Q L + K++V+D DVH+G
Sbjct: 191 EGRVKNALAVVRPPGHHAEPEVAGGFCLFSNVAVAAQNILKNYPESVRKIMVLDWDVHHG 250
Query: 196 NGTAEGFYRSNKVLTISLHMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGD 253
NGT + FY ++VL ISLH + G + P +G D +GEG+G G+N NIP P G GD
Sbjct: 251 NGTQKAFYDDDRVLYISLHRHELGKYYPG-TIHGNSDRVGEGKGEGFNCNIPWPWKGVGD 309
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y+ A ++++P ++F P+++++ G D++ D G+ +T Y M +++SLA
Sbjct: 310 SEYLWAFEQVIMPMGREFRPDLVIISSGFDAADGDTVGQCHVTPSCYGHMTHMLKSLA-- 367
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIK 373
G L V EGGY + A A + ++ P L P+ P+ EA V+VI+S+
Sbjct: 368 --RGNLCAVLEGGYSLDSIAKSALAVAKVLIGEPPDEL--PVVKQPKLEA--VEVIDSVI 421
Query: 374 QYQNDVIPFLKGS 386
+ Q+ K +
Sbjct: 422 KTQSKYWKCFKST 434
>gi|418697320|ref|ZP_13258313.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
gi|409954822|gb|EKO13770.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
Length = 278
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 142/260 (54%), Gaps = 7/260 (2%)
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
L H+ ++I ++ + G D T SW +A A + + + ++ G K
Sbjct: 23 LNEIHSKNHIQKIENSKGKRGYFDSD-TPFTEKSWISAYSAANSGIILSESLISGTIKNG 81
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRS 205
++L+RPPGHHA+ G+C LNN + + N+G K+ +ID DVH+GNGT E FY
Sbjct: 82 FSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNNGYKKIFIIDWDVHHGNGTQEIFYED 141
Query: 206 NKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVV 265
+ +S+H P +P G V E G+G+G G NIP+ +G++ Y+ E+VV
Sbjct: 142 PNIFYLSIHQ-----FPFYPMTGLVTETGKGKGIGTTKNIPMQANSGNQAYMQKFKEIVV 196
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P +++F+P+++++ G D+ DP G +T G+ ++ RI+ ADR GG++L EG
Sbjct: 197 PTMERFDPDIVLISAGFDAHKDDPLGGMNITTKGFEDLTRIILESADRICGGKVLSFLEG 256
Query: 326 GYHVTYSAYCLHATLEGVLN 345
GY +T + + A + VLN
Sbjct: 257 GYDLTALSESVEAHI-AVLN 275
>gi|449440846|ref|XP_004138195.1| PREDICTED: histone deacetylase 5-like [Cucumis sativus]
Length = 659
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 190/382 (49%), Gaps = 40/382 (10%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ V +DD M H T G + HPEN RI+ I + L I
Sbjct: 21 LGVLYDDRMCKHHTPDGDY--------------HPENPYRIRAIWNKLHSAGILQRCVVL 66
Query: 77 SGIPAQIPQLLSFHTPDYINELVE---------ADKAGGKMVCDGTVLNPGSWGAALLAV 127
G A+ +L+ H+ +++ + E DK K+ + N GS A+ LA
Sbjct: 67 KGKEAEDKHILAVHSKNHVKLIKEISSKEFDSRRDKIASKL--NSIYFNEGSSEASYLAA 124
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCG 183
G+ + + V G A+VRPPGHHA+ A G+C NN +A LN G
Sbjct: 125 GSVIDVAEKVAKGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPDLGIK 184
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYN 242
K++++D DVH+GN T + F+ +VL S+H + +GS+ P+ +G ++GEG G GYN
Sbjct: 185 KILIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEYGSFYPA-THDGFYTKVGEGPGAGYN 243
Query: 243 LNIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYR 301
+N+P NG GD Y+ +++P +++ P+MI++ G D++ DP G C+T GY
Sbjct: 244 INVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPYGYS 303
Query: 302 EMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPED 361
M + + +LA G++++ EGGY++ A + A E L L ++ P YP +
Sbjct: 304 IMLKKLMNLAQ----GKIVLALEGGYNLDSIASSMLACAE--LLLDGRTVNKPQETYPFE 357
Query: 362 EAFPVKVIESIKQYQNDVIPFL 383
+ +VI++++Q + P L
Sbjct: 358 STW--QVIQAVRQELSPFWPIL 377
>gi|421107226|ref|ZP_15567781.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
gi|410007745|gb|EKO61431.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
Length = 264
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 142/260 (54%), Gaps = 7/260 (2%)
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
L H+ ++I ++ + G D T SW +A A + + + ++ G K
Sbjct: 9 LNEIHSKNHIQKIENSKGKRGYFDSD-TPFTEKSWISAYSAANSGIILSESLISGTIKNG 67
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRS 205
++L+RPPGHHA+ G+C LNN + + N+G K+ +ID DVH+GNGT E FY
Sbjct: 68 FSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNNGYKKIFIIDWDVHHGNGTQEIFYED 127
Query: 206 NKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVV 265
+ +S+H P +P G V E G+G+G G NIP+ +G++ Y+ E+VV
Sbjct: 128 PNIFYLSIHQ-----FPFYPMTGLVTETGKGKGIGTTKNIPMQANSGNQAYMQKFKEIVV 182
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P +++F+P+++++ G D+ DP G +T G+ ++ RI+ ADR GG++L EG
Sbjct: 183 PTMERFDPDIVLISAGFDAHKDDPLGGMNITTKGFEDLTRIILESADRICGGKVLSFLEG 242
Query: 326 GYHVTYSAYCLHATLEGVLN 345
GY +T + + A + VLN
Sbjct: 243 GYDLTALSESVEAHI-AVLN 261
>gi|167717495|ref|ZP_02400731.1| histone deacetylase family, putative [Burkholderia pseudomallei
DM98]
Length = 303
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 154/291 (52%), Gaps = 25/291 (8%)
Query: 39 FDPGFLE---------------VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
FDP FL L +H ++ R+ +L ++ ++ + A
Sbjct: 8 FDPAFLSHRQGDLVYVVPHGTLNLGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATD 67
Query: 84 PQLLSFHTPDYINELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
QLL H P+Y+ +L EA G+ V D + + A LA G +A+ V+ G
Sbjct: 68 EQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTG 127
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ AYAL+RP GHHA A GYC+ NN +A + A + G +V ++D DVH+GNGT
Sbjct: 128 PLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQ 187
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNG-TVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY VL +SLH + P +G E G G G GYN+N+PLP+GTGD GY H
Sbjct: 188 QAFYDDPSVLFVSLH-----EAANFPVDGGEARETGGGAGAGYNVNVPLPSGTGDAGYRH 242
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
A ELV+P ++ F P +I++ GQD++AFDP GR + DG+R M R +R
Sbjct: 243 AFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQ 293
>gi|427702267|ref|YP_007045489.1| deacetylase [Cyanobium gracile PCC 6307]
gi|427345435|gb|AFY28148.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cyanobium gracile PCC 6307]
Length = 321
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 148/280 (52%), Gaps = 7/280 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE R+ ++ L+R + A +LL HTP Y+ ++ E +AG +
Sbjct: 24 HPECPARVDAVIQGLERAGLLARCRILPPRLATDAELLRCHTPGYLQQVREDIQAGRDQL 83
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
G T ++P S A LA G L+A++ V++ AYA+VRPPGHHA P G+C N
Sbjct: 84 STGDTAISPHSERTARLAAGGVLAAVEAVMEQRVHRAYAVVRPPGHHASPARGMGFCIYN 143
Query: 169 NAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + L G +++V+D DVH+GNGT + F+ VL +S H P +P +
Sbjct: 144 NVAVAARHLQAVHGLERILVVDWDVHHGNGTQDIFWSDPSVLFLSSHQ-----APLYPGS 198
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G+ E GEG G GY N PLP GT V A E ++P + F P+ +++ G DS A
Sbjct: 199 GSRQEQGEGPGSGYTRNCPLPAGTSGPEMVAAWREELLPLAEDFAPDFVLISAGFDSRAG 258
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G L + + R++ S+A ++ GRL+ EGGY
Sbjct: 259 DPLGDLRLQDRDFAALTRMLLSIAADHAQGRLVSALEGGY 298
>gi|110667399|ref|YP_657210.1| histone deacetylase [Haloquadratum walsbyi DSM 16790]
gi|385802825|ref|YP_005839225.1| histone deacetylase [Haloquadratum walsbyi C23]
gi|109625146|emb|CAJ51565.1| HdaI-type histone deacetylase [Haloquadratum walsbyi DSM 16790]
gi|339728317|emb|CCC39463.1| HdaI-type histone deacetylase [Haloquadratum walsbyi C23]
Length = 337
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 159/314 (50%), Gaps = 19/314 (6%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE +DR++ I L + + YI PA + S H +YI E+ E + GG
Sbjct: 17 RHPETADRLRAIRRALAKRHGASYIDPK---PATDTDIASVHDTEYITEIREFCECGGGN 73
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCF 166
TV + +W AAL + G A + ++G + +++ RPPGHHA A G+CF
Sbjct: 74 WDPDTVASIDTWDAALASAGLAQWAARVAVNGASGRQTPFSVGRPPGHHAVVDDAMGFCF 133
Query: 167 LNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+NNA +A Q ++ S + D DVH+GNGT + FY + VL +S H
Sbjct: 134 INNAAVAAQTLIDDPSSDVDTAAIFDWDVHHGNGTQDIFYDNANVLYVSTHEE-----GL 188
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G ++E G G+ G LNIPL G GD Y+H + ++ P I+ F P++ ++ G D
Sbjct: 189 YPGTGEIEETGTGDAEGTTLNIPLSAGAGDAEYLHMINTIIRPVIESFNPDLFIISAGFD 248
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA---YCLHATL 340
+ DP R ++ +GY + VRSLA+ G L V EGGY + A +H T
Sbjct: 249 AHRHDPISRMRVSTEGYALLTDRVRSLANDVDAG-LAFVLEGGYGLDTLADGVSIVHETF 307
Query: 341 EGVLNLPLALLSDP 354
+G PLA +P
Sbjct: 308 DG--RTPLAHDDEP 319
>gi|255547205|ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
gi|223546264|gb|EEF47766.1| histone deacetylase hda1, putative [Ricinus communis]
Length = 654
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 180/344 (52%), Gaps = 30/344 (8%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN-------ELVE 100
+ HPEN +RI I + L I + A+ LL+ H+ +++N + E
Sbjct: 32 DNHPENPNRISAIWNKLLANSIPQRCVVLNAKEAEDKNLLAVHSKNHVNLIRNISSKQYE 91
Query: 101 ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ + + N GS AA LA G+ + + V G A A+VRPPGHHA+
Sbjct: 92 SQRDNIASKFNSIYFNQGSSEAAYLAAGSVVEVAERVAKGELDSAAAIVRPPGHHAEHDK 151
Query: 161 ADGYCFLNNAGLAVQLALNS----GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+C NN +A L+ G K++++D DVH+GNGT + F++ +VL S+H +
Sbjct: 152 AMGFCLFNNVAVAASFLLDENPELGIKKILIVDWDVHHGNGTQKTFWKDPRVLFFSVHRH 211
Query: 217 H-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVHAMTELVVPAIQKFEPN 274
GS+ P++ +G +GEG G GYN+N+P NG GD Y+ +++P ++F P+
Sbjct: 212 EFGSFYPAN-DDGFYTMIGEGPGAGYNINVPWENGRCGDADYLAVWDHILIPVAKEFNPD 270
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
MI++ G D++ DP G +T GY M ++ L D ++ G++++ EGGY++ A
Sbjct: 271 MIIISAGFDAAVGDPLGGCRITPYGYSVM---LKKLMD-FANGKIVLALEGGYNLESIAN 326
Query: 335 CLHATLEGVLNLPLALLSDPIAYYPEDEAFPV----KVIESIKQ 374
A +E +L S PIA EA+P +VI+++++
Sbjct: 327 SFFACMEVLLE------SKPIA--GSSEAYPFESTWRVIQAVRK 362
>gi|262197232|ref|YP_003268441.1| histone deacetylase [Haliangium ochraceum DSM 14365]
gi|262080579|gb|ACY16548.1| Histone deacetylase [Haliangium ochraceum DSM 14365]
Length = 359
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 141/281 (50%), Gaps = 5/281 (1%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
HPE +RI + L+ + + A +L H Y+++L
Sbjct: 19 SHPERPERIGAVRDALRAAHLRERATLLPVREASEDELGRVHHAGYLSDLTRTVPGQSGW 78
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T +PG+W A L A G + VLD + ALVRPPGHHA+ A G+C +N
Sbjct: 79 LDGDTYFSPGTWEAVLKAAGAVVDVALGVLDARFQRGMALVRPPGHHAEADRAMGFCLIN 138
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
N +A A +G +V ++D DVH+GNGT F VL +S H P +P G
Sbjct: 139 NIAVAAAAARAAGAARVAIVDWDVHHGNGTQHIFEEDPSVLFLSCHQY-----PFYPGTG 193
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
E+G G G G +N+ LP G GDR Y+ M E+ PA+++F+P++I+L G D+ D
Sbjct: 194 APSEVGRGAGVGATVNVGLPAGAGDRAYMATMNEVFAPALRRFQPDIILLSAGFDAYVDD 253
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
P +++ G+R + + LAD GGRL EGGYH+
Sbjct: 254 PLAGMRVSLGGFRALAGTLARLADELCGGRLACALEGGYHL 294
>gi|15607064|ref|NP_214446.1| acetoin utilization protein [Aquifex aeolicus VF5]
gi|2984320|gb|AAC07842.1| acetoin utilization protein [Aquifex aeolicus VF5]
Length = 310
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 151/298 (50%), Gaps = 7/298 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPEN +R+ +I+ +++ I + A++ ++ H P YI E+ + K+GG
Sbjct: 19 EHPENKNRLISILEHVEKSGIKKALIDVKPRRAKVEEVALNHDPAYIQEIHDFCKSGGGY 78
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ T P ++ AL AVG L + +L G A+ VRPPGHHA+ A G+C N
Sbjct: 79 LDPDTYATPDTYDVALYAVGGVLEGIDRILSGELDRAFCAVRPPGHHAEYAKAMGFCIFN 138
Query: 169 NAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N + L G KV +ID D H+GNGT + FY + V S H P +P
Sbjct: 139 NVAIGAHYLRKIKGVNKVFIIDFDAHHGNGTQKSFYEDDTVFYFSTHEY-----PFYPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G+ DE G G+G+GY N+P+ G GD Y+ +L+ + +F P+ +++ G D
Sbjct: 194 GSEDERGAGKGYGYTYNVPMSAGAGDDEYIPVYEKLLPELMNRFSPDFVLVSAGYDLHRD 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
DP ++ +G R++ R + +D + +L EGGY++ C+ TLE +L
Sbjct: 254 DPLTYLNVSNEGVRQIVRNIIKTSDELNAP-VLFALEGGYNLKALGECVVITLEEMLR 310
>gi|418713784|ref|ZP_13274507.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
gi|410789775|gb|EKR83473.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
Length = 313
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 149/288 (51%), Gaps = 22/288 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSF--------HTPDYINELVEA 101
H ENSDR+ ++ L R S Y + P++ F H+ ++I ++ +
Sbjct: 22 HYENSDRL---LACLNRLHQSSYFN-----SLFFPEMKKFPNEFLNEIHSQNHIQKIENS 73
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
G D T SW +A A + + + ++ G K ++L+RPPGHHA+
Sbjct: 74 KGKRGYFDSD-TPFTEKSWISAYSAANSGIILSEFLISGTIKNGFSLLRPPGHHAEHNRI 132
Query: 162 DGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWG 221
G+C LNN + + N+G K+ +ID DVH+GNGT E FY + +S+H
Sbjct: 133 MGFCMLNNVAITARYLQNNGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----F 187
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P +P G E G+G+G G NIP+ +GD+ Y+ E++VP +++FEP+++++ G
Sbjct: 188 PFYPMTGLATETGKGKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAG 247
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
D+ DP G +T G+ ++ RI+ D+ G++L EGGY++
Sbjct: 248 FDAHKNDPLGGMNITTKGFEDLTRIILESVDKICSGKVLSFLEGGYNL 295
>gi|448330775|ref|ZP_21520053.1| histone deacetylase [Natrinema versiforme JCM 10478]
gi|445610929|gb|ELY64693.1| histone deacetylase [Natrinema versiforme JCM 10478]
Length = 343
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 158/311 (50%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I LK+ Y+ P + + + H +Y+ +
Sbjct: 13 DPG-----SRHPESPDRLRAIREGLKKKHGVEYVE---ADPCDLETMAAVHEREYLESVR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E GG T +W AA + G A + L+G +++ RPPGHHA
Sbjct: 65 EFCADGGGSWDPDTTAVEKTWDAACRSAGLACWAAEQALEGATGRNTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSGC---GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NN +A Q AL+S +V +ID DVH+GNGT + FY + V +SLH
Sbjct: 125 YDNAMGFCFVNNVAVAAQHALDSDAYDVDQVAIIDWDVHHGNGTQDIFYDRDDVFFVSLH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G VDE+GEG+G G +N+P+P GT D Y+ A+ + A+ +F+P+
Sbjct: 185 EQ-----GLYPGTGDVDEIGEGDGEGTTMNVPMPAGTDDSEYLAALEGPISAALTEFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y M VR+LAD + L V EGGY +
Sbjct: 240 LLLISAGFDAHRHDPISRIRLSTEAYALMSDRVRTLADD-TDAALAFVLEGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVALVHETFDG 309
>gi|87310780|ref|ZP_01092907.1| acetoin utilization protein [Blastopirellula marina DSM 3645]
gi|87286537|gb|EAQ78444.1| acetoin utilization protein [Blastopirellula marina DSM 3645]
Length = 311
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 155/313 (49%), Gaps = 29/313 (9%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKR-GPISPYI--SW 75
++ D L HDTG HPE++ R+ + + L++ G + + W
Sbjct: 4 LYSDHEFLEHDTGN-----------------HPESAQRLLAVTARLEQTGLLDQCLRPQW 46
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
+ AQ QL+ HT + GG + + TV++ S+ A LAVG + A +
Sbjct: 47 -AHATAQDIQLI--HTAAMRTSVEGFSLKGGGRIEEDTVVSHDSYHVATLAVGAAMDATR 103
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHY 194
VL G A LVRPPGHHA PTM G+C N+ +A Q AL+ +V+++D DVH+
Sbjct: 104 RVLAGDSSNALCLVRPPGHHATPTMPMGFCLFNSVAIAAQYALSKLDLDRVLIVDWDVHH 163
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGT + F+ S + +S+H P +P G E+G+ G GY N+PL G R
Sbjct: 164 GNGTQDAFWESERAAFLSIHRY-----PFYPGTGDTLEIGQRAGLGYTRNLPLKYGVSRR 218
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
++ + K P +I+L G D+ A DP G L + Y E+ +IV A Y
Sbjct: 219 DFISQFERALEDITAKVRPQLILLSAGFDAHAADPVGSLGLETEDYDELTQIVLDAASVY 278
Query: 315 SGGRLLIVQEGGY 327
+GG+L+ + EGGY
Sbjct: 279 AGGKLVSILEGGY 291
>gi|225848632|ref|YP_002728795.1| histone deacetylase 14 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644094|gb|ACN99144.1| histone deacetylase 14 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 306
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 163/330 (49%), Gaps = 27/330 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ +DD L HDTG G HPE+ R+ I L+ P+ +
Sbjct: 4 VGYIYDDIYLKHDTGIG----------------HPESPQRLVYINRYLE--PLKDKLVHI 45
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
S A + ++ H Y E+++ AGG + T + S+ AA++AVG L A+
Sbjct: 46 SPRRATVKEITLIHDTYYPQEIMDFCSAGGGYLDPDTHVGIHSYDAAVMAVGAGLQAVDK 105
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+L + + VRPPGHHA+ A G+C NN + + A + G KV +ID D H+GN
Sbjct: 106 ILSNEVERVFCAVRPPGHHAEKDKAMGFCIFNNIAITARYAQSKGFKKVFIIDFDAHHGN 165
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY + V S H P +P G+ DE G G+G+GY N+PLP GTGD Y
Sbjct: 166 GTQKAFYDDDTVFYFSTHEY-----PFYPGTGSKDEKGVGKGYGYTYNVPLPAGTGDDVY 220
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ E + P ++ F+P++I++ G D DP ++ +G +G+IV S+ +
Sbjct: 221 LQIYQEELPPLVKSFDPDIILVSAGYDLHEDDPLTYLEVSTEG---IGKIVESIL-QLKD 276
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
+ + EGGY++ + T+E +L +
Sbjct: 277 VPYIFMLEGGYNLDAIGESVKLTIEKMLEV 306
>gi|270307703|ref|YP_003329761.1| acetoin utilization protein/histone deacetylase [Dehalococcoides
sp. VS]
gi|270153595|gb|ACZ61433.1| acetoin utilization protein/histone deacetylase [Dehalococcoides
sp. VS]
Length = 341
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 156/330 (47%), Gaps = 26/330 (7%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + ++ LNH+TG H EN DR+ I+ + + ++
Sbjct: 3 VGLVYNHIYLNHETGT-----------------HVENPDRLLAIMEYINTHGLKDHLVHI 45
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
+ +L SFH YI+ + E +GG + TV++ S+ AAL AVG + +
Sbjct: 46 EPKRVGLRELESFHKRSYISRVEEVGFSGGGWLDQDTVISVDSYEAALYAVGGVIEGVDK 105
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYG 195
VL G + A+ L RPPGHHA P + G+C NN L ALN +V V+D DVH+G
Sbjct: 106 VLSGELESAFVLCRPPGHHALPEASMGFCVFNNVALGALHALNKHKLKRVAVVDFDVHHG 165
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NG +V IS H H P G E G F LNIPLP G GD
Sbjct: 166 NGIQHVCLNDPRVTYISTHQIH-----HFPFTGDSREDGP---FQNILNIPLPEGCGDSH 217
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y A E++ P ++KF P +I++ G D+ D G CL+ G+ + R ++ A+
Sbjct: 218 YQKAFDEVICPYLRKFAPELILVCAGYDAHFADDMGEMCLSQKGFAGITRSLKKTAEEVC 277
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
G+L+ EGGYH A + ATL +LN
Sbjct: 278 RGKLVFSLEGGYHYLGLAEGVGATLSVLLN 307
>gi|282162754|ref|YP_003355139.1| putative histone deacetylase [Methanocella paludicola SANAE]
gi|282155068|dbj|BAI60156.1| putative histone deacetylase [Methanocella paludicola SANAE]
Length = 326
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 158/296 (53%), Gaps = 18/296 (6%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
L H E +R++ I+ L+ P+ + + PA +P+L + H P Y+ ++ + G
Sbjct: 15 LPGHVECKERLEAIMERLR--PMG--LEFREPRPASVPELEAVHAPWYVRNILGHGR--G 68
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
++ D T ++ GS AAL A G + A+ L G +A +VRPPGHHA P A G+C
Sbjct: 69 RLDLD-TYMSEGSAMAALKAAGAAVEAVDLALSGQ-SLAAGMVRPPGHHALPAQAMGFCL 126
Query: 167 LNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NNA + AL KV+++D DVH+GNGT FY VL S+H P P
Sbjct: 127 FNNAAVGAAHALKK-VKKVLIVDWDVHHGNGTELMFYGRPDVLYFSVHQY-----PHFPG 180
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G D+ G G+G GYN+N+PLP G+GD YVHA ++VP + + P ++++ G D
Sbjct: 181 TGAADDTGTGDGEGYNVNVPLPAGSGDADYVHAFESILVPVMDAYRPELVIVSAGYDPHE 240
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
DP G +T G+ + ++++ ++++ EGGY + Y C+ A+L G
Sbjct: 241 ADPLGDMRMTAPGFGALASLIKTAGS----ANVVMLLEGGYSLKYLPLCVEASLRG 292
>gi|418686823|ref|ZP_13247987.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741677|ref|ZP_13298051.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421089968|ref|ZP_15550769.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
gi|410001231|gb|EKO51845.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
gi|410738530|gb|EKQ83264.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751125|gb|EKR08104.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 278
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 141/260 (54%), Gaps = 7/260 (2%)
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
L H+ ++I ++ + G D T SW +A A + + + ++ G K
Sbjct: 23 LNEIHSKNHIQKIENSKGKRGYFDSD-TPFTEKSWISAYSAANSGIILSESLISGTIKNG 81
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRS 205
++L+RPPGHHA+ G+C LNN + + N+G K+ +ID DVH+GNGT E FY
Sbjct: 82 FSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQNNGYKKIFIIDWDVHHGNGTQEIFYED 141
Query: 206 NKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVV 265
+ +S+H P +P G + E G+G+G G NIP+ + ++ Y+ E+VV
Sbjct: 142 PNIFYLSIHQ-----FPFYPMTGLITETGKGKGIGTTKNIPMQANSENQAYIQKFKEIVV 196
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P +++F+P+++++ G D+ DP G LT G+ ++ RI+ ADR GG++L EG
Sbjct: 197 PTMERFDPDIVLISAGFDAHKDDPLGGMNLTTKGFEDLTRIILESADRICGGKVLSFLEG 256
Query: 326 GYHVTYSAYCLHATLEGVLN 345
GY +T + + A + VLN
Sbjct: 257 GYDLTALSESVEAHI-AVLN 275
>gi|73748181|ref|YP_307420.1| histone deacetylase [Dehalococcoides sp. CBDB1]
gi|289432231|ref|YP_003462104.1| histone deacetylase [Dehalococcoides sp. GT]
gi|452203183|ref|YP_007483316.1| histone deacetylase superfamily protein [Dehalococcoides mccartyi
DCMB5]
gi|452204627|ref|YP_007484756.1| histone deacetylase superfamily protein [Dehalococcoides mccartyi
BTF08]
gi|73659897|emb|CAI82504.1| histone deacetylase family protein [Dehalococcoides sp. CBDB1]
gi|288945951|gb|ADC73648.1| Histone deacetylase [Dehalococcoides sp. GT]
gi|452110242|gb|AGG05974.1| histone deacetylase superfamily protein [Dehalococcoides mccartyi
DCMB5]
gi|452111683|gb|AGG07414.1| histone deacetylase superfamily protein [Dehalococcoides mccartyi
BTF08]
Length = 341
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 158/333 (47%), Gaps = 26/333 (7%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + ++ LNHDTG H EN DR+ I+ L+ + +
Sbjct: 3 VGLVYNHIYLNHDTGT-----------------HVENPDRLLAIMEYLETHGLKDRLVHI 45
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
+ +L SFH YI+ + E +GG + TV++ S+ AAL AVG + +
Sbjct: 46 EPKRVGMRELESFHKRSYISRVEEVGFSGGGWLDQDTVISLDSYEAALYAVGGVIEGVDK 105
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYG 195
VL A+ L RPPGHHA P + G+C NN L ALN +V V+D DVH+G
Sbjct: 106 VLSRELDSAFVLCRPPGHHALPEASMGFCVFNNVALGALHALNKHKLKRVAVVDFDVHHG 165
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NG +++ +SLH H P G E G F LNIPLP G GD
Sbjct: 166 NGIQHVCLNDPRLIYLSLHQIH-----HFPFTGDSRENGP---FQNILNIPLPAGCGDSH 217
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y A E++ P ++KF P +I++ G D+ D G CL+ G+ + R ++ A+
Sbjct: 218 YQKAFDEVIGPYLRKFAPELILVCAGYDAHFADDMGEMCLSQQGFAGITRAIKHAAEEVC 277
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
GG+L+ EGGYH A + ATL +LN L
Sbjct: 278 GGKLVFSLEGGYHYLGLAEGVGATLAVLLNEAL 310
>gi|145350128|ref|XP_001419469.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357494|ref|XP_001422953.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579701|gb|ABO97762.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583197|gb|ABP01312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 399
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 160/318 (50%), Gaps = 26/318 (8%)
Query: 50 HPENSDRIKNIVSILKRGPISP------YISWHSGIPAQIPQLLSFHTPDYIN--ELVEA 101
HPE++ R+ I+ L+ G ++P + +PA L H +Y N EL+ A
Sbjct: 62 HPESNARVPAILDALEAGALTPAARPGEVLEITDVVPATKKALERVHAKNYCNGLELLCA 121
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI------AYALVRPPGHH 155
+A + T P S+ +L VG + V+D + A+ L+RPPGHH
Sbjct: 122 TRAPTNLDTAPTYCTPSSFQDVMLGVGAATRLVDEVIDRAKETKEKAPSAFGLIRPPGHH 181
Query: 156 AQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A P A G+C + A A + A G KV++ D DVH+GNGT + F + VL IS H
Sbjct: 182 AVPRGAMGFCLVGTAAAAARHAQLRGHKKVLIFDYDVHHGNGTNDIFRDDDSVLFISTHE 241
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+ S+P G + ++GEG+G G +NIPLP G+GD+ + A+ E+VVPA +F+P+
Sbjct: 242 DG-----SYPGTGKITDMGEGDGLGATINIPLPPGSGDKAVLSALEEIVVPAAARFQPDF 296
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
I++ G D+ DP Y + ++ LA+ GG+++ + EGGY
Sbjct: 297 IIVSAGYDAHWRDPLAGLTFRTGTYHRLCTKLKELANEMCGGKIVFLLEGGYD------- 349
Query: 336 LHATLEGVLNLPLALLSD 353
L EGV + ALL D
Sbjct: 350 LVGLSEGVADSFRALLGD 367
>gi|421114631|ref|ZP_15575046.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410013813|gb|EKO71889.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 313
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 147/286 (51%), Gaps = 22/286 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSF--------HTPDYINELVEA 101
H ENSDR+ ++ L R S Y + P++ F H+ ++I ++ +
Sbjct: 22 HYENSDRL---LACLNRLHQSSYFN-----SLFFPEMKKFPNEFLNEIHSQNHIQKIENS 73
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
G D T SW +A A + + + ++ G K ++L+RPPGHHA+
Sbjct: 74 KGKRGYFDSD-TPFTEKSWISAYSAANSGIILSEFLISGTIKNGFSLLRPPGHHAEHNRI 132
Query: 162 DGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWG 221
G+C LNN + + N+G K+ +ID DVH+GNGT E FY + +S+H
Sbjct: 133 MGFCMLNNVAITARYLQNNGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----F 187
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P +P G E G+G+G G NIP+ +GD+ Y+ E++VP +++FEP+++++ G
Sbjct: 188 PFYPMTGLATETGKGKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAG 247
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP G +T G+ ++ RI+ D+ G++L EGGY
Sbjct: 248 FDAHKNDPLGGMNITTKGFEDLTRIILESVDKICSGKVLSFLEGGY 293
>gi|359690295|ref|ZP_09260296.1| acetoin-histone deacetylase [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750553|ref|ZP_13306839.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
gi|418758738|ref|ZP_13314920.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114640|gb|EIE00903.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404273156|gb|EJZ40476.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
Length = 308
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 154/309 (49%), Gaps = 27/309 (8%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+DD L H+TG HPE+ R+++I++ L + + W P
Sbjct: 7 YDDTFLLHETGT----------------FHPESPQRLESILNRLYKTSYFKDLHWIK--P 48
Query: 81 AQIPQLL--SFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
++P L H + G D T + S+ AALLA G+ + + +
Sbjct: 49 NKLPLELIDPVHNQRHRERFSVIQGKRGSFDGD-TPYSESSFDAALLAAGSGVDLVNKIR 107
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGT 198
+ ALVRPPGHHA+ + G+C LNN + L+ G KV ++D DVH+GNGT
Sbjct: 108 SNEIESGIALVRPPGHHAETGRSMGFCLLNNIAITANYLLSQGIEKVYILDWDVHHGNGT 167
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
E FY S+KV SLH P +P G+V E GEG+G + LNIPL G+GD+ Y+H
Sbjct: 168 QEIFYDSDKVFFTSLHQY-----PYYPGTGSVHEKGEGKGQNFTLNIPLSMGSGDKEYLH 222
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
E+VVP++ +F+P +++ G D DP L+ + + E R++ S A + G +
Sbjct: 223 YFQEVVVPSVLEFQPEYVLISAGFDGHKRDPLAGMNLSTNAFAEFTRLILS-ATKQIGSK 281
Query: 319 LLIVQEGGY 327
+ EGGY
Sbjct: 282 TISFLEGGY 290
>gi|345489606|ref|XP_003426178.1| PREDICTED: histone deacetylase 6-like [Nasonia vitripennis]
Length = 1094
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 183/368 (49%), Gaps = 28/368 (7%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +DD ML H + V E HPE RI +I S K +
Sbjct: 494 VCIVYDDRMLKH--------------YNVVDESHPEKPGRITSIFSKHKDYNLLERCILL 539
Query: 77 SGIPAQIPQLLSFHTPDYINELVEA------DKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
G A ++L HT DY++ + + D A + L+P +W +A ++ G+
Sbjct: 540 QGRAASEEEILLAHTQDYLDNIKKTAETKLKDLAKQASSLNSVYLHPETWTSAAISAGSL 599
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVID 189
L + +L+G + A+VRPPGHHA+ A G+C NN +A + A++ +V+++D
Sbjct: 600 LQVVDSILNGESQSGVAIVRPPGHHAEEDAACGFCIFNNVAIAAKYAVSCHNLKRVLIVD 659
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL- 247
D+H+GNGT + +L ISLH ++GS+ P H + + +G G+G G+N+NIP
Sbjct: 660 WDIHHGNGTQSILENDSSILYISLHRYDNGSFFP-HSKAANYNVVGTGKGEGFNVNIPWN 718
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
G GD Y+ A ++V+P ++ P ++++ G D+ DP G ++ + Y M +
Sbjct: 719 KRGMGDAEYIAAFQQVVMPIAYQYNPELVLVSAGFDACIADPLGGCKVSPEMYGHMTHWL 778
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVK 367
SLA+ GR+++ EGGY+V ++ + + +L PL L P A
Sbjct: 779 SSLAN----GRIILTLEGGYNVNSISHAMTMCTKALLGDPLVPLDAHQVACPSAVASINN 834
Query: 368 VIESIKQY 375
V+++ KQY
Sbjct: 835 VLQTHKQY 842
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 25 MLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIP 84
M+ DTG ++D E +PE +R + K + + + A+
Sbjct: 113 MIRKDTGL-VYDESMAEHRCLWDENYPECPERFTRVFQRCKELGLVERCKYITPRSAEYS 171
Query: 85 QLLSFHTPDYINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHV 137
+LL HTP +I L + + D +P ++ +LLA G+T++ ++++
Sbjct: 172 ELLLKHTPAHIEILKSTEGCNNEKKLEDLSSKYDAIYFHPSTYQLSLLATGSTINLVENI 231
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGN 196
+ + A++RPPGHHA GYCF NN ++ ++AL + K ++++D DVH+G
Sbjct: 232 CKENIQNGMAIIRPPGHHAMKAEYCGYCFFNNVAISAEVALKNNLAKRILIVDWDVHHGQ 291
Query: 197 GTAEGFYRSNKVLTISLH 214
T + FY +V+ S+H
Sbjct: 292 ATQQMFYNDPRVVYFSIH 309
>gi|22327994|ref|NP_200914.2| histone deacetylase 5 [Arabidopsis thaliana]
gi|75247631|sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone deacetylase 5
gi|20259320|gb|AAM13986.1| putative histone deacetylase [Arabidopsis thaliana]
gi|21539579|gb|AAM53342.1| histone deacetylase-like protein [Arabidopsis thaliana]
gi|23197730|gb|AAN15392.1| histone deacetylase-like protein [Arabidopsis thaliana]
gi|332010034|gb|AED97417.1| histone deacetylase 5 [Arabidopsis thaliana]
Length = 660
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 185/376 (49%), Gaps = 46/376 (12%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G E HPE DRI+ I L+ +S
Sbjct: 27 VGLIYDETMCKHDTPDG--------------EDHPECPDRIRVIWEKLQLAGVSQRCVVL 72
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGK--------MVCDGTVLNPGSWGAALLAVG 128
A+ L HT D++N LV++ K + LN GS AA LA G
Sbjct: 73 GSSKAEDKHLQLVHTKDHVN-LVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAG 131
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V +G +A+VRPPGHHA+ A G+C NN +A LN G K
Sbjct: 132 SVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKK 191
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D DVH+GNGT + F++ +VL S+H + +G + P+ +G + +GEG G G+N+
Sbjct: 192 ILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAG-DDGDYNMVGEGPGEGFNI 250
Query: 244 NIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P G GD Y+ A +++P ++F P++I L G D++ DP G C+T GY
Sbjct: 251 NVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSV 310
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHV----TYSAYCLHATLEGVLNLPLALLSDPIAYY 358
M + + A G++++ EGGY++ S C+ LE + P Y
Sbjct: 311 MLKKLMEFAQ----GKIVLALEGGYNLDSIAKSSLACVQVLLED------KQIQGPPEAY 360
Query: 359 PEDEAFPVKVIESIKQ 374
P + + +VI+++++
Sbjct: 361 PFESTW--RVIQAVRK 374
>gi|421121713|ref|ZP_15582006.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
gi|410345564|gb|EKO96660.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
Length = 313
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 146/280 (52%), Gaps = 10/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H ENSDR+ ++ L + S + +P + L H+ ++I ++ + G
Sbjct: 22 HYENSDRLLACLNRLHQSSYFNSLFFPEMKKLPNEF--LNEIHSQNHIQKIENSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW +A A + + + ++ G K ++L+RPP HHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWISAYSAANSGIILSEFLISGTIKNGFSLLRPPDHHAEHNRIMGFCML 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + N+G K+ +ID DVH+GNGT E FY + +S+H P +P
Sbjct: 139 NNVAITARYLQNNGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+G+G G NIP+ +GD+ Y+ E++VP +++FEP+++++ G D+
Sbjct: 194 GLATETGKGKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKN 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T G+ ++ RI+ AD+ G++L EGGY
Sbjct: 254 DPLGGMNITTKGFEDLTRIILESADKICSGKVLSFLEGGY 293
>gi|195478791|ref|XP_002100654.1| GE17180 [Drosophila yakuba]
gi|194188178|gb|EDX01762.1| GE17180 [Drosophila yakuba]
Length = 1136
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 160/308 (51%), Gaps = 14/308 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE------ADK 103
HPE RI++I + + P + S A ++ HT ++N + D
Sbjct: 562 HPEQPSRIEHIHKMHGEYALLPRMKLLSARAATTDEVCLAHTRAHVNTVRRLLGREPEDL 621
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G + + L+P ++ A LA G+ L A+ VL G + VRPPGHHA+ G
Sbjct: 622 YGAAAIYNSVYLHPRTFDCATLAAGSVLQAVDSVLRGESRSGICNVRPPGHHAEQDQPHG 681
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HG++
Sbjct: 682 FCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGAFF 741
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 742 PKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSA 800
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 801 GFDAAIGDPLGGCKVTPEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCT 856
Query: 341 EGVLNLPL 348
+ +L P+
Sbjct: 857 KTLLGDPV 864
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 171/361 (47%), Gaps = 29/361 (8%)
Query: 10 SPAAEGIINVFWD----DGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILK 65
S A E + ++F + G++ T ++D ++H E +R ++ +
Sbjct: 91 SGAQECVTDIFQNAVNCKGLVRKPTAL-IYDESMSQHCCLWDKEHYECPERFTRVLERCR 149
Query: 66 RGPISPYISWHSGIPAQIPQLLSFHTPDYINEL-----VEADKAGGKMVC--DGTVLNPG 118
++ A ++L HT ++ L + D+ ++ D ++P
Sbjct: 150 ELNLAERCLELPSRSATKDEILRLHTEEHFERLKATAGIRDDERMEELSSRYDSIYIHPS 209
Query: 119 SWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL 178
++ +LLA G+T+ + H++ G A++RPPGHHA +GYCF NN LA Q AL
Sbjct: 210 TFELSLLASGSTIELVDHLIAGKAHNGMAIIRPPGHHAMKAEFNGYCFFNNVALAAQHAL 269
Query: 179 N-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEG 236
+ ++++ID DVH+G GT FY +V+ S+H HGS+ P H +G G
Sbjct: 270 DVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWP-HLHESDYHAIGSG 328
Query: 237 EGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
G GYN N+PL N TG + Y+ +L++P +F+P +I++ G D++ P G
Sbjct: 329 AGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEME 387
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
+T Y + + LAD R+ +V EGG YCL + EG +LL DP
Sbjct: 388 VTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCLDSLAEGAALTLRSLLGDP 436
Query: 355 I 355
Sbjct: 437 C 437
>gi|366995711|ref|XP_003677619.1| hypothetical protein NCAS_0G03800 [Naumovozyma castellii CBS 4309]
gi|342303488|emb|CCC71267.1| hypothetical protein NCAS_0G03800 [Naumovozyma castellii CBS 4309]
Length = 726
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 191/364 (52%), Gaps = 41/364 (11%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILK-----RGPISPYISWHSGIPAQIP-------QLLSF 89
+ E ++ HPE+ RI I IL + P I + +IP ++L
Sbjct: 95 SYFEYIDPHPEDPRRIYRIYKILAENGLIKDPTLSGIEDIGDLMLKIPVRDATEEEILEV 154
Query: 90 HTPDYIN-----------ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
H+ ++ + EL++A + G D N S+ +A L VG ++ A K V+
Sbjct: 155 HSKEHYDFIEKTSTMNREELLKATEKG-----DSVYFNNDSFASAKLPVGGSIEACKAVV 209
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYG 195
+G K + A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+G
Sbjct: 210 EGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAIAAKNILKNYPESVRRIMILDWDIHHG 269
Query: 196 NGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGD 253
NGT + FY ++VL ISLH G + P NG D+ GEG+G G+N NI P G GD
Sbjct: 270 NGTQKAFYDDDRVLYISLHRFELGKYYPG-TINGQYDQTGEGKGEGFNCNITWPVGGVGD 328
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y+ A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA
Sbjct: 329 AEYIWAFEQVVMPMAREFQPDLVIISSGFDAADGDSIGQCHVTPSCYGHMTHMLKSLA-- 386
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIK 373
G L +V EGGY++ A + + ++ P L DP+ P+ EA +++I+ +
Sbjct: 387 --KGNLCVVLEGGYNLDAIARSALSVAKILIGEPPDELPDPLR-DPKPEA--IEIIDKVI 441
Query: 374 QYQN 377
+ Q+
Sbjct: 442 RLQS 445
>gi|340368431|ref|XP_003382755.1| PREDICTED: histone deacetylase 6-like [Amphimedon queenslandica]
Length = 604
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 169/313 (53%), Gaps = 15/313 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG---- 105
HPE +RI +I L + A ++L H+ + +E+V +
Sbjct: 58 HPECPERISSIWEQLVDDGVVECCRRIDARSATEQEILYVHSKTHYDEMVATENMSLEKL 117
Query: 106 --GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + +NP S ALLA G+ K V+D A+VRPPGHHA+ + G
Sbjct: 118 FQRALRLNSIYINPSSMQCALLAAGSVCEVTKLVIDETVDNGVAIVRPPGHHAESYTSMG 177
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+CF NN +A ++A+ G ++++ID DVH+GN T FY N+VL +SLH ++G +
Sbjct: 178 FCFFNNVAIAAKMAIEEYGVKRILIIDWDVHHGNATQHMFYDDNRVLYVSLHRHDNGGFY 237
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P + G D++G+G+G GYN+NIP GD Y+ A ++++P +++P ++++
Sbjct: 238 PGGDE-GDYDKVGKGKGSGYNVNIPWNLARMGDAEYMSAFYQIIMPIAFEYQPELVIVSS 296
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G DS DP G +T +GY M ++SLAD G++++ EGGY++T ++ + A +
Sbjct: 297 GFDSGEGDPIGGYRVTPNGYAHMTHQLKSLAD----GKIVVALEGGYNLTTISHSMSAVV 352
Query: 341 EGVL-NLPLALLS 352
+ +L + P +L S
Sbjct: 353 QVLLGDTPRSLES 365
>gi|224079409|ref|XP_002305854.1| histone deacetylase [Populus trichocarpa]
gi|222848818|gb|EEE86365.1| histone deacetylase [Populus trichocarpa]
Length = 646
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 198/386 (51%), Gaps = 38/386 (9%)
Query: 12 AAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
++E ++ + +D+ M H T G + HPEN +RI+ I + L I
Sbjct: 3 SSERLVGIIYDEKMCKHHTPDG--------------DSHPENPNRIRVIWNKLLANNIPQ 48
Query: 72 YISWHSGIPAQIPQLLSFHTPDYINEL-----VEADKAGGKMVC--DGTVLNPGSWGAAL 124
SG A+ L++ H+ +++N + + D ++ + N GS AA
Sbjct: 49 RCVVLSGKEAEDKYLMAVHSENHVNLIRNISSKQFDSRRNRIASKLNSIYFNEGSSEAAY 108
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---- 180
A G+ L + + G A+VRPPGHHA+ A G+C NN +A L+
Sbjct: 109 HAAGSVLELAERIAKGDLNSGAAIVRPPGHHAEYDEAMGFCLFNNVAVAASFLLDERPEL 168
Query: 181 GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH-GSWGPSHPQNGTVDELGEGEGF 239
G K++++D DVH+GNGT + F+ ++VL S+H + GS+ P + +G +GEG G
Sbjct: 169 GVKKILIVDWDVHHGNGTQKTFWNDSRVLFFSVHRHEFGSFYPGN-DDGFYTMIGEGPGT 227
Query: 240 GYNLNIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMD 298
GYN+N+P + GD Y+ +++P +KF+P+MI++ G D++ DP G C+T
Sbjct: 228 GYNINVPWEHARCGDADYLAVWDHILIPVAKKFDPDMIIVSAGFDAAVGDPLGGCCVTPY 287
Query: 299 GYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL-NLPLALLSDPIAY 357
GY M ++ L D ++ G++++ EGGY++ A A ++ +L + P +S +
Sbjct: 288 GYSVM---LKKLMD-FAQGKIMLALEGGYNLDSIANSFLACMKVLLEDKP---VSGSVEA 340
Query: 358 YPEDEAFPVKVIESIKQYQNDVIPFL 383
YP + + +VI+++++ + P L
Sbjct: 341 YPFESTW--RVIQAVRKKLSPYWPAL 364
>gi|443704318|gb|ELU01419.1| hypothetical protein CAPTEDRAFT_126869 [Capitella teleta]
Length = 802
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 197/379 (51%), Gaps = 38/379 (10%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI-VSILKRGPISPYISWHS 77
+ +DD ML + L+D G+ EN R+ I ++L G +
Sbjct: 50 LVYDDRMLK---TRCLWDDGY-----------AENPHRLTVIHEALLSHGLLQECCQ--- 92
Query: 78 GIPAQIP---QLLSFHTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVG 128
IPA++ ++L+ H+P+Y+++++ + K + DG +P ++ +A LA G
Sbjct: 93 -IPARLATEAEILAVHSPEYLHQVISSQKMEKNELMKLSERMDGVFFHPSTYESASLAAG 151
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVV 187
+T+ ++ +++ + +A+VRPPGHHAQ T A+G C NN +A Q AL N ++++
Sbjct: 152 STVDLVEQIVEKKLRNGFAVVRPPGHHAQHTEANGNCIFNNVAIAAQHALDNLSVNRILI 211
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D DVH+G GT FY +VL S+H G + P+ + D++G+G+G YN+N+P
Sbjct: 212 VDWDVHHGQGTQRAFYHDPRVLCFSIHRYEEGEFWPN-LRESNYDQIGKGKGLKYNINVP 270
Query: 247 L-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
+ G+ D Y+ + ++++P ++ P ++++ G D++ D G+ +T GY M
Sbjct: 271 INQTGSTDADYLAFIQQILLPVAYEYSPQLVIVSGGFDAAVGDAEGKGYVTPAGYAAMLH 330
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFP 365
++ SLA+ GR+ +V EGGY + A + +L P LSD ++ +AF
Sbjct: 331 MLMSLAE----GRVAVVLEGGYCLPSLAESSALCVRTLLGHPCPQLSDQSTHHL--DAFI 384
Query: 366 VKVIESIKQYQNDVIPFLK 384
+++I + PF +
Sbjct: 385 RSTVKTILNVIRVLRPFWR 403
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 164/339 (48%), Gaps = 16/339 (4%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG- 105
++ HPE DRI I LK + A I ++L HT D++ + E
Sbjct: 454 MQNHPERPDRISRIYQKLKDCGLVERCKVLPSRAATIEEILLAHTSDHVKRVEEFQDLSL 513
Query: 106 ---GKMVCD--GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ CD L+ ++ A +AVG TL+ + + G A++RPPGHHA+
Sbjct: 514 EELHSLECDFNSVYLSQEAYQCARIAVGCTLNVVDEIATGQSCNGVAVIRPPGHHAEEDR 573
Query: 161 ADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
G+C+ NN +A + A G K++++D DVH+GNGT F VL IS+H
Sbjct: 574 PMGFCYFNNVAIAARYAQKEHGLKKILILDWDVHHGNGTQHIFDHDPSVLYISIHRRDNG 633
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ + ++G G G G+N+NIP G GD Y+ ++V+P +F P+++++
Sbjct: 634 FFFPMGDDNDFYQVGLGGGEGFNINIPWEMGGMGDSEYIATFQQIVMPVAYEFNPDLVLI 693
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + ++ LA GR+++ EGGY++ +
Sbjct: 694 SAGFDAAKGDPLGGCAITPEGYAHLTHMLTGLAH----GRVILALEGGYNLN----SISE 745
Query: 339 TLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
++ ++ L L P+ P ++ + +IK +QN
Sbjct: 746 SMASCTSILLDDLCPPLVVNPVKKSAARSIQSTIKVHQN 784
>gi|430809063|ref|ZP_19436178.1| putative acetylpolyamine aminohydrolase [Cupriavidus sp. HMR-1]
gi|429498471|gb|EKZ96979.1| putative acetylpolyamine aminohydrolase [Cupriavidus sp. HMR-1]
Length = 357
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 144/250 (57%), Gaps = 16/250 (6%)
Query: 98 LVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL---DGHGKIAYALVRPPGH 154
+ EA G + C L P SW + L + + ++A +HV DG+G +AYAL RP GH
Sbjct: 117 IAEAGYYLGDLSCP---LGPHSWQSILRSAHSAVAAARHVCAPHDGNG-MAYALCRPSGH 172
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA A G+C++NN+ +A Q L KV V+D+D H+G+GT + FY+ + V+TISLH
Sbjct: 173 HAHADRAGGFCYVNNSAIAAQTLLER-FDKVAVLDVDAHHGDGTQQIFYQRSDVMTISLH 231
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+ GS+ P + G E G G G+GYNLN PLP+GTGD G++ A+ + + A++ + P
Sbjct: 232 ADPGSYYPFY--TGYATERGHGAGYGYNLNFPLPHGTGDAGFLSAL-DSALDALRDYRPQ 288
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
+VL +G D+ DP + ++ YR +G + +L G ++VQEGGY V
Sbjct: 289 ALVLALGFDTYKHDPISVLQVGLEAYRGVGERIHAL-----GVPTVVVQEGGYEVDAIGI 343
Query: 335 CLHATLEGVL 344
L A L G +
Sbjct: 344 ALEAFLAGFV 353
>gi|159896687|ref|YP_001542934.1| histone deacetylase superfamily protein [Herpetosiphon aurantiacus
DSM 785]
gi|159889726|gb|ABX02806.1| histone deacetylase superfamily [Herpetosiphon aurantiacus DSM 785]
Length = 345
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 23/344 (6%)
Query: 49 KHPENSDRIKNIVSILK-----RGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADK 103
+HPEN++R++ I ++L + ++P H A ++ + H P ++ L +
Sbjct: 18 EHPENANRLRAIHAMLAADYELQQHLTPLAPRH----ATAAEIEAVHVPSHLPTLQRMAQ 73
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G + +L P S A LA G + A VL G ++ALVRPPGHHA A G
Sbjct: 74 FGDWADAETYIL-PDSVEIAQLAAGGAIVATDAVLSGRHANSFALVRPPGHHATADQAMG 132
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C NNA +A A G +V ++D DVH+GNGT + FY++ VL IS H W P
Sbjct: 133 FCLFNNAAIAAAFAQREYGLKRVAILDWDVHHGNGTQDIFYQNPDVLYISTH----GW-P 187
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
P +G E+G G G LN+PL TGD G+ + + PAI++F+P ++++ G
Sbjct: 188 LWPNSGHWKEMGANAGLGTTLNLPLRPLTGDMGFHLVFEQAIAPAIRRFKPELLIISAGY 247
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
D+ +DP G L+ GY ++ IV +LA GRL+ + EGGY++ A L ATL+
Sbjct: 248 DAHIYDPLGNLALSTGGYAQLSSIVYNLAAECCDGRLVGLLEGGYNLEALAQSLTATLQT 307
Query: 343 -VLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKG 385
V P + + +++ PE + +IE +++ P LKG
Sbjct: 308 WVSGQPAPIFNQEVSHTPEPDV--TWLIEHLRREH----PLLKG 345
>gi|448396826|ref|ZP_21569274.1| histone deacetylase [Haloterrigena limicola JCM 13563]
gi|445673355|gb|ELZ25916.1| histone deacetylase [Haloterrigena limicola JCM 13563]
Length = 343
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 160/311 (51%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I LKR Y+ P + + + H +Y+ E+
Sbjct: 13 DPG-----SRHPESPDRLRAIRERLKRKHGVEYVE---ADPCDLETMAAVHDREYLEEVR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E + GG T +W AA + G A K L+G K +++ RPPGHHA
Sbjct: 65 EFCENGGGNWDPDTTAVEATWDAARRSAGLACWAAKAALEGETGRKTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NNA +A Q AL+ +V ++D DVH+GNGT + FY S+ V +S+H
Sbjct: 125 YDDAMGFCFVNNAAVAAQYALDHDDYDVDRVAILDWDVHHGNGTHDIFYDSDDVFFVSIH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P +G +DE GEG+G G +NIP+P GT + GY+ A+ + A F+P+
Sbjct: 185 EQ-----GLYPGSGDIDETGEGDGAGTTMNIPMPAGTDENGYLAAIDGPIAAAFTDFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y + +RSLAD I+ EGGY +
Sbjct: 240 LVLISAGFDAHQHDPISRIRLSTEAYALLSDRMRSLADDLDAALAFIL-EGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVALVHETFDG 309
>gi|242022432|ref|XP_002431644.1| histone deacetylase hda2, putative [Pediculus humanus corporis]
gi|212516952|gb|EEB18906.1| histone deacetylase hda2, putative [Pediculus humanus corporis]
Length = 1146
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 180/349 (51%), Gaps = 26/349 (7%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPDYINELV--------E 100
HPE +RI I + + + +S S + + LLS HT ++ ++ E
Sbjct: 524 HPEKPERITKIFLMHRDYNLLERCLSIKSRMATEEEILLS-HTNSHLEDMKKLPTMSAEE 582
Query: 101 ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
++ G D L+ S+ ALLA GT L + V++G + A+VRPPGHHA+
Sbjct: 583 LNEKGNSY--DSIYLHSKSYECALLAAGTLLQVVDSVINGEARSGVAVVRPPGHHAEDDT 640
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
A G+C NN +A + A+ +++V+D DVH+GNGT + F ++VL ISLH NHG
Sbjct: 641 ACGFCLFNNVSIAAKYAIEVHSLKRILVLDWDVHHGNGTQKIFEEDDRVLYISLHRYNHG 700
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPN---GTGDRGYVHAMTELVVPAIQKFEPNM 275
+ P+ + G D +G G G G+N+NIP G D Y+ A +V+P +F P +
Sbjct: 701 RFFPT-TKEGDHDRVGIGRGEGFNVNIPWNRPGGGMSDGDYIAAFHSIVLPIAYQFNPEL 759
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+++ G D+ DP G +T + Y M + +LA+ G++++ EGGY+VT +Y
Sbjct: 760 VLVSAGFDACIHDPLGHCKVTPEAYAHMTHWLTTLAN----GKVILSLEGGYNVTSISYA 815
Query: 336 LHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
L + +L PL L+ +A P A V+ I+++ Q P LK
Sbjct: 816 LTLCTKALLGDPLPPLTTTLA--PCSSA--VETIQNVLNTQEKYWPCLK 860
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 161/350 (46%), Gaps = 36/350 (10%)
Query: 15 GIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYIS 74
G + +DD M+ H F + +PEN +R I+ K + +
Sbjct: 62 GKTGIVYDDQMVKH--------------FCMWDKNYPENPERFSKIIERCKELKLIDRCT 107
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAV 127
A ++L+ HT D I L E + D +N ++ +LLAV
Sbjct: 108 RIESRLATEEEILTQHTIDKIKVLKETQNENDETKLEQLSSKYDSVYVNNFTYECSLLAV 167
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVV 186
G+T+ + + G + A++RPPGHHA GYCF NN +A QLAL +++
Sbjct: 168 GSTIDLVDAICKGEIQNGMAIIRPPGHHAMRDEYCGYCFYNNVAIAAQLALKKFNLQRIL 227
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNI 245
++D D+H+G T + FY +V+ S+H +HGS+ P + +G+ G G N NI
Sbjct: 228 IVDWDIHHGQATQQMFYDDKRVVYFSIHRYDHGSFWPE-LRESNFHYIGDSAGKGKNFNI 286
Query: 246 PL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMG 304
PL G D Y+ ++++P +F+P +I++ G D++ P G ++ Y +
Sbjct: 287 PLNETGMKDADYLAIFQQVLLPMAYEFQPELIIISAGYDAAINCPEGSMEVSPACYSHLL 346
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
+ LA GG++ ++ EGG YCL + EGV LL DP
Sbjct: 347 SPLMGLA----GGKVAVILEGG-------YCLKSLSEGVALTLRTLLGDP 385
>gi|452206225|ref|YP_007486347.1| HdaI-type histone deacetylase [Natronomonas moolapensis 8.8.11]
gi|452082325|emb|CCQ35579.1| HdaI-type histone deacetylase [Natronomonas moolapensis 8.8.11]
Length = 336
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 150/286 (52%), Gaps = 18/286 (6%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA--DKAGG 106
+HPE +DRI+ I + R + + G A + + H +Y+ + VEA D GG
Sbjct: 17 RHPETADRIRAIRQGMAR---RHGVEYREGFLADRDAIEAVHDDEYVAD-VEAFCDDGGG 72
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA--YALVRPPGHHAQPTMADGY 164
D TV +W AAL + G A+ LDG A +++ RPPGHHA+ A G+
Sbjct: 73 TWDAD-TVAVEETWEAALASAGLACWAVDEALDGADGRATPFSIGRPPGHHAEFDEAMGF 131
Query: 165 CFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWG 221
CF NNA +A Q A++ +G + ++ D DVH+GNGT FY + V S H G +
Sbjct: 132 CFFNNAAVAAQRAIDRDGTGVDRAIIFDWDVHHGNGTQNIFYDQDDVFYASAH-EQGLF- 189
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P G VDE G + LN PLP G+GD Y + +L+ PA+++F+P++ ++ G
Sbjct: 190 ---PGTGDVDETGGPDAEQTILNAPLPGGSGDEEYAAFLDDLLAPAMERFDPDLFIVSAG 246
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP R ++ +GY M VRS+AD + L V EGGY
Sbjct: 247 FDAHRHDPISRMRVSTEGYGYMTDRVRSIADAHDAA-LAFVLEGGY 291
>gi|383620355|ref|ZP_09946761.1| histone deacetylase [Halobiforma lacisalsi AJ5]
gi|448695767|ref|ZP_21697516.1| histone deacetylase [Halobiforma lacisalsi AJ5]
gi|445784221|gb|EMA35038.1| histone deacetylase [Halobiforma lacisalsi AJ5]
Length = 348
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 150/302 (49%), Gaps = 17/302 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE DR++ I LKR Y+ P + ++ S H Y+ E+ E GG
Sbjct: 17 RHPETPDRLRAIRERLKRKHGVEYVE---ADPVDVDEIASVHDRSYVEEIEEFCAQGGGN 73
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCF 166
T +W A + G A++ L+G K +++ RPPGHHA A G+CF
Sbjct: 74 WDPDTTAVEETWDAIRCSAGQARWAVERALEGDDGRKTPFSIGRPPGHHAVVDDAMGFCF 133
Query: 167 LNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+NN +A Q AL S +V ++D DVH+GNGT + FY V +S+H
Sbjct: 134 VNNVAVAAQWALESEDYDVDRVAIVDWDVHHGNGTQDIFYDREDVFFVSIHEK-----GL 188
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G +DE GEG+G G +N+P+P GT D Y+ A + A++++ P+++++ G D
Sbjct: 189 YPGTGEIDERGEGDGDGTTMNLPMPAGTDDVDYLAAFDGPIGTALEEYGPDLVIVSAGFD 248
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHATL 340
+ DP R L+ + Y + +R L DR G V EGGY + S +H T
Sbjct: 249 AHRHDPISRIRLSTEAYALLTDRLRGLTDRV-GAAFAFVLEGGYSLDVLADSVSIVHETF 307
Query: 341 EG 342
+G
Sbjct: 308 DG 309
>gi|254576937|ref|XP_002494455.1| ZYRO0A01870p [Zygosaccharomyces rouxii]
gi|238937344|emb|CAR25522.1| ZYRO0A01870p [Zygosaccharomyces rouxii]
Length = 707
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 183/359 (50%), Gaps = 31/359 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S I A + +LL
Sbjct: 77 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGEDDIGELMLKIPVREATVEELLQV 136
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + + + + + D N S+ AA L G + A K V++G K
Sbjct: 137 HTKEHLEFIEKTSQMNREELLKETETGDSVYFNSDSYSAAKLPCGGAIEACKAVVEGRVK 196
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A++RPPGHHA+P MA G+C +N +A Q L + +++++D D+H+GNGT +
Sbjct: 197 NALAVIRPPGHHAEPEMAGGFCLFSNVAVAAQNILKNYPESVRRILILDWDIHHGNGTQK 256
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY ++VL ISLH G + P +G D+ GEG+G G+N NI P G GD Y+
Sbjct: 257 AFYNDDRVLYISLHRFELGKYYPG-TIHGQYDQTGEGKGEGFNCNITWPVGGVGDAEYML 315
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P +++ P+++++ G D++ D G+ ++ Y M +++SLA G
Sbjct: 316 AFEQIVMPMAREYRPDLVIISSGFDAADGDTIGQCHVSPSCYGHMTHMLKSLA----RGN 371
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQY 375
L + EGGY++ A + + ++ P L DP + P+ EA + KVI +Y
Sbjct: 372 LCVALEGGYNLDAIATSALSVAKILIGEPPEELPDP-SKNPKLEAIEMIDKVIHVQSKY 429
>gi|147668956|ref|YP_001213774.1| histone deacetylase superfamily protein [Dehalococcoides sp. BAV1]
gi|146269904|gb|ABQ16896.1| histone deacetylase superfamily [Dehalococcoides sp. BAV1]
Length = 341
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 157/333 (47%), Gaps = 26/333 (7%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + ++ LNHDTG H EN DR+ I+ L+ + +
Sbjct: 3 VGLVYNHIYLNHDTGT-----------------HVENPDRLLAIMEYLETHGLKDRLVHV 45
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
+ +L SFH YI+ + E +GG + TV++ S+ AAL AVG + +
Sbjct: 46 EPKRVGMRELESFHKRSYISRVEEVGFSGGGWLDQDTVISLDSYEAALYAVGGVIEGVDK 105
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYG 195
VL + L RPPGHHA P + G+C NN L ALN +V V+D DVH+G
Sbjct: 106 VLSRELDSVFVLCRPPGHHALPEASMGFCVFNNVALGALHALNKHKLKRVAVVDFDVHHG 165
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NG +++ +SLH H P G E G F LNIPLP G GD
Sbjct: 166 NGIQHVCLNDPRLIYLSLHQIH-----HFPFTGDSRENGP---FQNILNIPLPAGCGDSH 217
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y A E++ P ++KF P +I++ G D+ D G CL+ G+ + R ++ A+
Sbjct: 218 YQKAFDEVIGPYLRKFAPELILVCAGYDAHFADDMGEMCLSQQGFAGITRAIKHAAEEVC 277
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
GG+L+ EGGYH A + ATL +LN L
Sbjct: 278 GGKLVFSLEGGYHYLGLAEGVGATLAVLLNEAL 310
>gi|9759454|dbj|BAB10370.1| unnamed protein product [Arabidopsis thaliana]
Length = 1108
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 174/343 (50%), Gaps = 38/343 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G E HPE DRI+ I L+ +S
Sbjct: 703 VGLIYDETMCKHDTPDG--------------EDHPECPDRIRVIWEKLQLAGVSQRCVVL 748
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGK--------MVCDGTVLNPGSWGAALLAVG 128
A+ L HT D++N LV++ K + LN GS AA LA G
Sbjct: 749 GSSKAEDKHLQLVHTKDHVN-LVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAG 807
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V +G +A+VRPPGHHA+ A G+C NN +A LN G K
Sbjct: 808 SVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKK 867
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D DVH+GNGT + F++ +VL S+H + +G + P+ +G + +GEG G G+N+
Sbjct: 868 ILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPA-GDDGDYNMVGEGPGEGFNI 926
Query: 244 NIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P G GD Y+ A +++P ++F P++I L G D++ DP G C+T GY
Sbjct: 927 NVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSV 986
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHV----TYSAYCLHATLE 341
M ++ L + ++ G++++ EGGY++ S C+ LE
Sbjct: 987 M---LKKLME-FAQGKIVLALEGGYNLDSIAKSSLACVQVLLE 1025
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 175/343 (51%), Gaps = 38/343 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G D E DRI+ I L+ ++
Sbjct: 60 VGLVYDETMCKHDTPNGKVDV--------------ECPDRIRVIWEKLQLAGVTQRCVVL 105
Query: 77 SGIPAQIPQLLSFHTPDYINELVEA------DKAGGKMVC--DGTVLNPGSWGAALLAVG 128
G A+ L HT ++N LV++ D K+ D LN GS AA LA G
Sbjct: 106 GGSKAEDKHLKLVHTKKHVN-LVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAG 164
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V +G +A+VRPPGHHA+ A G+C NN +A LN K
Sbjct: 165 SVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKK 224
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D D+H+GNGT + F++ ++VL S+H +HGS+ P +G + +GEG G G+N+
Sbjct: 225 ILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYP-FGDDGDFNMVGEGPGEGFNI 283
Query: 244 NIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P G GD Y+ +++P ++F+P++I+L G D++ DP G C+T GY
Sbjct: 284 NVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSV 343
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHV----TYSAYCLHATLE 341
M ++ L + ++ G++++ EGGY++ S C+ LE
Sbjct: 344 M---LKKLME-FAHGKIVLALEGGYNLESLGKSSLACVQVLLE 382
>gi|408791371|ref|ZP_11202981.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408462781|gb|EKJ86506.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 313
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 159/324 (49%), Gaps = 23/324 (7%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ + + L H+TG G HPE R+ +I+ L P ++
Sbjct: 8 IVFHEEFLKHNTGPG----------------HPETHGRLVSILDHLSDLPSKNFLWKKDF 51
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHV 137
+ A + + S H P Y+ + + G DG TV + S+ AA LAVG L V
Sbjct: 52 LEAPLLVISSIHDPTYVRLVGRVCEEKGTGYLDGDTVFSSHSYLAASLAVGAGLYLADEV 111
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNG 197
L G+ K ALVRPPGHHA+ A G+C NN + + + G +++++D DVH+GNG
Sbjct: 112 LLGNLKNGMALVRPPGHHAEADHAMGFCIFNNIAITAKYLQSKGIKRILILDWDVHHGNG 171
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T FY + V ISLH P +P G++ E G+G+G G LNIPL G G+ Y+
Sbjct: 172 TQHQFYEDDSVYFISLHQF-----PFYPGTGSLSERGKGKGIGTTLNIPLARGAGEFEYL 226
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+ + ++KF+P +++ G D+ DP G L+ + + ++ +A+ Y+ G
Sbjct: 227 SSFPS-IQREMEKFQPEFVLVSAGFDAHKKDPLGGMNLSTSSFGIFTQEIQKIANTYASG 285
Query: 318 RLLIVQEGGYHVTYSAYCLHATLE 341
R++ EGGY + A + LE
Sbjct: 286 RMISFLEGGYDLNALAESVKLHLE 309
>gi|22327996|ref|NP_200915.2| histone deacetylase 18 [Arabidopsis thaliana]
gi|75246526|sp|Q8LRK8.1|HDA18_ARATH RecName: Full=Histone deacetylase 18
gi|21105769|gb|AAM34783.1|AF510670_1 HDA18 [Arabidopsis thaliana]
gi|332010036|gb|AED97419.1| histone deacetylase 18 [Arabidopsis thaliana]
Length = 682
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 175/343 (51%), Gaps = 38/343 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G D E DRI+ I L+ ++
Sbjct: 60 VGLVYDETMCKHDTPNGKVDV--------------ECPDRIRVIWEKLQLAGVTQRCVVL 105
Query: 77 SGIPAQIPQLLSFHTPDYINELVEA------DKAGGKMVC--DGTVLNPGSWGAALLAVG 128
G A+ L HT ++N LV++ D K+ D LN GS AA LA G
Sbjct: 106 GGSKAEDKHLKLVHTKKHVN-LVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAG 164
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V +G +A+VRPPGHHA+ A G+C NN +A LN K
Sbjct: 165 SVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKK 224
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D D+H+GNGT + F++ ++VL S+H +HGS+ P +G + +GEG G G+N+
Sbjct: 225 ILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYP-FGDDGDFNMVGEGPGEGFNI 283
Query: 244 NIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P G GD Y+ +++P ++F+P++I+L G D++ DP G C+T GY
Sbjct: 284 NVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSV 343
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHV----TYSAYCLHATLE 341
M ++ L + ++ G++++ EGGY++ S C+ LE
Sbjct: 344 M---LKKLME-FAHGKIVLALEGGYNLESLGKSSLACVQVLLE 382
>gi|406830220|ref|ZP_11089814.1| histone deacetylase superfamily protein [Schlesneria paludicola DSM
18645]
Length = 312
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 148/299 (49%), Gaps = 6/299 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E +R++ I + L R ++ A + ++ H YI + K GG +
Sbjct: 18 HKECPERLRAIDAELLRTGLAKRCQIRETRLATVDEIARIHDRAYIGRAAQFAKDGGGWI 77
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T L+P S+ AL A GT++ A+ V+ G + A LVRPPGHHA A G+C NN
Sbjct: 78 EADTFLSPKSYDVALRAAGTSIQAIDAVMAGPDQQALCLVRPPGHHALVHDAMGFCLFNN 137
Query: 170 AGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
LA A+ +V+V+D DVH+GNGT + FY + V +S+H + P +P G
Sbjct: 138 IALAADHAVKQHKLRRVLVVDWDVHHGNGTQDIFYERDDVWFLSVHRS-----PFYPGTG 192
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G N+P+ GT + Y+ ++ +K +P ++++ G D+ A D
Sbjct: 193 MKDETGSRLGLGTKYNLPVAFGTARKDYLSQFEAMLTDVAKKCQPELVLISAGFDAHAED 252
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
P G L + + + +V +A YS GRL+ EGGYHV A + L +L P
Sbjct: 253 PIGSLGLETEDFGTLTHLVMQVAQTYSQGRLVSCLEGGYHVKRLAESVACHLTTLLANP 311
>gi|448730443|ref|ZP_21712751.1| HdaI-type histone deacetylase [Halococcus saccharolyticus DSM 5350]
gi|445793611|gb|EMA44183.1| HdaI-type histone deacetylase [Halococcus saccharolyticus DSM 5350]
Length = 336
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 17/291 (5%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I L + Y+ P + H DY+ E
Sbjct: 13 DPG-----SRHPESPDRLRAIRQALAKRHGVEYVE---ADPIDESAARAAHDADYVREFR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E +GG TV +W AAL + G + A + LDG + +AL RPPGHHA
Sbjct: 65 EFCASGGGQWDPDTVAVEATWDAALRSAGQAVWAAEAALDGASGRETPFALGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+CFLNNA +A + ++ G +V ++D DVH+GNGT + F V S+H
Sbjct: 125 ADDAMGFCFLNNAAIAAEAMIDDGRAERVAIVDWDVHHGNGTQDIFEDRGDVFYASIHER 184
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
+P G E+G G+G G +N+ P+G GD YV A+ E+ P + +F P+++
Sbjct: 185 -----GLYPGTGEAGEIGTGDGEGATVNLAYPSGAGDPAYVAAIDEVFAPLLDEFGPDLL 239
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
++ G D+ DP R ++ +GY + +R LADR G V EGGY
Sbjct: 240 LVSAGFDAHEHDPISRMSVSTEGYGVLAARLRDLADRSDAG-FGFVLEGGY 289
>gi|194894640|ref|XP_001978099.1| GG17876 [Drosophila erecta]
gi|190649748|gb|EDV47026.1| GG17876 [Drosophila erecta]
Length = 1130
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 169/336 (50%), Gaps = 17/336 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE------ADK 103
HPE RI+ I + + P + S A ++ HT ++N + D
Sbjct: 554 HPEQPTRIQQIHKMHGEYALLPRMKQLSARAATTDEVCLAHTRAHVNTVRRLLGREPEDL 613
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G + + L+P ++ A LA G+ L A+ VL G + VRPPGHHA+ G
Sbjct: 614 HGAAAIYNSVYLHPRTFDCATLAAGSVLQAVDSVLRGESRSGICNVRPPGHHAEQDQPHG 673
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL +SLH HG++
Sbjct: 674 FCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYMSLHRYEHGAFF 733
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P P +G D +G+G G G+N+NIP G GD Y A +LV+P +F P ++++
Sbjct: 734 PKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLVMPIAYEFNPQLVLVSA 792
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 793 GFDAAIGDPLGGCKVTPEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCT 848
Query: 341 EGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P A+ +ES++Q
Sbjct: 849 KTLLGDYVPTPQLGAAALQKPATVAYQ-SCVESLQQ 883
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 144/281 (51%), Gaps = 22/281 (7%)
Query: 85 QLLSFHTPDYINELVEA-----DKAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHV 137
++L HT ++ L E D+ ++ D ++P ++ +LLA G+T+ + H+
Sbjct: 161 EILRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHL 220
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGN 196
+ G + A++RPPGHHA +GYCF NN LA Q AL+ ++++ID DVH+G
Sbjct: 221 VAGKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALAAQHALDVHKLQRILIIDYDVHHGQ 280
Query: 197 GTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDR 254
GT FY +V+ S+H HGS+ P H Q +G G G GYN N+PL G +
Sbjct: 281 GTQRFFYNDPRVVYFSIHRFEHGSFWP-HLQESDYHAIGAGAGTGYNFNVPLNALGMTNG 339
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y+ +L++P +F+P +I++ G D++ P G +T Y + + LAD
Sbjct: 340 DYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD-- 397
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
R+ +V EGG YCL + EG +LL DP
Sbjct: 398 --ARVAVVLEGG-------YCLDSLAEGAALTLRSLLGDPC 429
>gi|441209584|ref|ZP_20974269.1| histone deacetylase-like amidohydrolase [Mycobacterium smegmatis
MKD8]
gi|440627075|gb|ELQ88895.1| histone deacetylase-like amidohydrolase [Mycobacterium smegmatis
MKD8]
Length = 369
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 184/368 (50%), Gaps = 27/368 (7%)
Query: 20 FWDDGMLNHDTGK--GLFDTGFDPGFLE--VLEKHPENSDRIKNIVSILKRGPISPYISW 75
W + HDTG G+F G GF + + + E+ R+ +V + G I I
Sbjct: 10 IWHERYAWHDTGTHVGIFPAG---GFNQPHMTFESAESKSRMAGLVEV--SGMIDELIRI 64
Query: 76 HSGIPAQIPQLLSFHTPDYINEL-VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
+ A LL H YI+ + E+ GG T PGS+ A LA G T++A
Sbjct: 65 -APRTASREDLLRVHDAAYIDRIERESADRGGDGGDGFTPFGPGSYDIARLAAGGTIAAA 123
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVH 193
+ VL G AYALVRPPGHHA+ G+C +N +A++ A + G +V ++D DVH
Sbjct: 124 EAVLTGAADNAYALVRPPGHHARRDTGMGFCIFSNVCVAIEYARAHLGVQRVAIVDYDVH 183
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTG 252
+GNG ++ + VLTISLH + PQ+ G V + G G N+N+PL G+G
Sbjct: 184 HGNGAESIYWDDSDVLTISLHQDR-----LFPQDTGAVTDTGAS---GTNINVPLHAGSG 235
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
+ Y+ A+ + VPA+ F P++I + G D S DP G +T G+++M ++ +LA+
Sbjct: 236 NGAYLAAIERVAVPAVTAFAPDIIFVSSGFDPSPVDPLGCMTVTSGGFKDMAALLVTLAE 295
Query: 313 RYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESI 372
GG+++ EGGY + +C A LE + ++ P E+F +
Sbjct: 296 DVCGGKIVFSHEGGYSPVHVPFCGLAVLEALTGHETGVVD------PFGESFDASPAHLL 349
Query: 373 KQYQNDVI 380
+ +Q+ VI
Sbjct: 350 QPWQDAVI 357
>gi|448339399|ref|ZP_21528424.1| histone deacetylase superfamily protein [Natrinema pallidum DSM
3751]
gi|445620067|gb|ELY73575.1| histone deacetylase superfamily protein [Natrinema pallidum DSM
3751]
Length = 333
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 16/286 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPY--ISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
+HPENSDR++ I R +S Y + + P ++L+ H DY+ E +GG
Sbjct: 17 RHPENSDRLRAI-----RRALSDYNDVEYVDAAPTTRDRILAVHDEDYVAEFESFCASGG 71
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI--AYALVRPPGHHAQPTMADGY 164
TV +W A+L + G A K LD + ++L RPPGHHA A G+
Sbjct: 72 GNWDADTVAVESTWEASLASAGLAEWAAKTALDRRTERFPPFSLGRPPGHHAVEDDAMGF 131
Query: 165 CFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
CF NN +A + +++G +V +ID DVH+GNGT E FY V +S H +
Sbjct: 132 CFFNNVAIAARSVIDAGTAERVAIIDWDVHHGNGTQEVFYDDGSVFYVSFHED-----GL 186
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G V+E G G+G G LN+P P GT + GY+ A+ E+V P + F+P+++++ G D
Sbjct: 187 YPGTGFVEETGTGDGTGTTLNVPFPPGTTEYGYLTAIDEVVGPELLAFDPDLLLVSAGFD 246
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+ +DP R ++ DGY + + VR +A +G L V EGGY +
Sbjct: 247 AHRYDPISRMSVSTDGYGLLTQQVREIAAS-TGAALGFVLEGGYSL 291
>gi|168028163|ref|XP_001766598.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162682243|gb|EDQ68663.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 436
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 165/337 (48%), Gaps = 32/337 (9%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGI------PAQIPQLLSFHTPDYINELVEA 101
E HPE+++R+ +I+ L+RG ++P + + A + + H+ Y+ L A
Sbjct: 91 EGHPESNERVPSILEALERGKLTPEFRGNEVLRIQNFKAASQEDVAAVHSLGYVKGLERA 150
Query: 102 DKAG---GKMVCDG---TVLNPGSWGAALLAVGTTLSAMKHVLDGHGK-----IAYALVR 150
+ G + D T ++ ++LA G +L+ + V+ + + +ALVR
Sbjct: 151 MQKAEDEGLIFLDNSGPTYATSSTYHDSMLAAGASLALVDSVVAASKETQNPPVGFALVR 210
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A + G +V +ID DVH+GNGT + FY + +
Sbjct: 211 PPGHHAVPAGPMGFCVFGNIAVAARYAQQAHGLQRVFIIDYDVHHGNGTNDAFYDDSDIY 270
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + S+P G + E+G G G G LN+PLP G+GD E++ PA Q
Sbjct: 271 FLSTHQDG-----SYPGTGKMSEVGAGSGEGATLNLPLPGGSGDDTMARVFEEVIAPAAQ 325
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D+ DP T Y + ++SLA GGR + EGGY +
Sbjct: 326 RFKPDIILVSAGFDAHVQDPLAGMQFTTGTYYRLASDIKSLAQSLCGGRCVFFLEGGYDL 385
Query: 330 ---------TYSAYCLHATLEGVLNLPLALLSDPIAY 357
++ A+ +L L+ P L +P Y
Sbjct: 386 KSLSNSVADSFRAFLGDKSLSSRLDNPAVLYDEPSLY 422
>gi|396458606|ref|XP_003833916.1| hypothetical protein LEMA_P066770.1 [Leptosphaeria maculans JN3]
gi|312210464|emb|CBX90551.1| hypothetical protein LEMA_P066770.1 [Leptosphaeria maculans JN3]
Length = 857
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 182/347 (52%), Gaps = 30/347 (8%)
Query: 50 HPENSDRIKNIVSILKRGPISPYIS----------WHSGI-PAQIPQLLSFHTPD---YI 95
HPE+ RI +I +K+ + ++ W GI PA P++L HT + ++
Sbjct: 156 HPEDPRRIHSIFEEIKQAGLVDAVNEEGDAREDQCWRIGIRPATKPEILLIHTEEHYAFV 215
Query: 96 NELVEADKAGGKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPP 152
L D + K+ D N ++ A LA G + A K V++G + A A++RPP
Sbjct: 216 ESLQYMDASQLKLEAERLDSIYFNRSTYDCARLAAGGAIEACKAVVEGSVRNAIAIIRPP 275
Query: 153 GHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
GHHA+ G+C NN +A+++ ++ C KV+++D DVH+GNG FY VL
Sbjct: 276 GHHAESDQPSGFCIFNNVPIAIRVCQDAYPQTCRKVLILDWDVHHGNGVQHAFYNDPNVL 335
Query: 210 TISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPA 267
ISLH+ +G + P+ P +G +D G+G G G N+NIP +G GD Y++A E+V+P
Sbjct: 336 YISLHVYRNGHFYPNLP-DGNLDYCGDGPGEGKNVNIPWAEHGMGDAEYLYAFQEIVMPI 394
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+F+P+++++ G D++ D G +T Y M ++ LA G+L++ EGGY
Sbjct: 395 ATEFDPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHMLMRLA----KGKLVVCLEGGY 450
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
++ A A ++ P L + +A P+D A V I+ +K+
Sbjct: 451 NLRSIARSALAVTRVLMLEPPDRLREDLA-APKDSA--VYTIQQVKR 494
>gi|292654693|ref|YP_003534590.1| HdaI-type histone deacetylase [Haloferax volcanii DS2]
gi|448293298|ref|ZP_21483406.1| HdaI-type histone deacetylase [Haloferax volcanii DS2]
gi|291371898|gb|ADE04125.1| HdaI-type histone deacetylase [Haloferax volcanii DS2]
gi|445571332|gb|ELY25885.1| HdaI-type histone deacetylase [Haloferax volcanii DS2]
Length = 337
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 162/327 (49%), Gaps = 31/327 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L+HDTG +HPE +DR++ I L + Y+ PA+
Sbjct: 10 LDHDTGP----------------RHPETADRLRAIRRGLAKRHGVEYVD---ASPAEKST 50
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--K 143
+ + H Y++E E + GG TV SW AAL + G A + LDG
Sbjct: 51 VAAVHDDGYVDEFHEFCRDGGGNWDPDTVAVEASWDAALTSAGLAEWAARAALDGDDGRN 110
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGF 202
++L RPPGHHA A G+CF NNA +A Q ++ G +V + D DVH+GNGT + F
Sbjct: 111 TPFSLGRPPGHHAVEDDAMGFCFFNNAAVAAQAVIDDGLAERVAIFDWDVHHGNGTQDIF 170
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTE 262
Y V S+H + +P G VDE GEG+G G LN+PL G GD YV++ E
Sbjct: 171 YDRGDVFYTSIHED-----GLYPGTGEVDETGEGDGEGSTLNVPLHAGAGDADYVYSFDE 225
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
+ PA+++F+P++ ++ G D+ DP R ++ +GY + V+ L + + + V
Sbjct: 226 AIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAMLTECVQELCEE-TDAAIAFV 284
Query: 323 QEGGY---HVTYSAYCLHATLEGVLNL 346
EGGY ++ +H T +G + +
Sbjct: 285 LEGGYGLDTLSEGVATVHETFDGRIAM 311
>gi|118472445|ref|YP_884587.1| histone deacetylase superfamily protein [Mycobacterium smegmatis
str. MC2 155]
gi|441201829|ref|ZP_20970978.1| putative deacetylase [Mycobacterium smegmatis MKD8]
gi|118173732|gb|ABK74628.1| histone deacetylase superfamily protein [Mycobacterium smegmatis
str. MC2 155]
gi|440630519|gb|ELQ92290.1| putative deacetylase [Mycobacterium smegmatis MKD8]
Length = 309
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 139/281 (49%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + L + + + + A++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVEMALAQSRFDDLLRVEAEL-AELDVTRYVHSNAYVDALEAARPTDGFVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W L VG TL A+ VLDG + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWEVVLRGVGGTLQAVDSVLDGTAQNAFVACRPPGHHAETERAMGFCLF 138
Query: 168 NNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A L G +V ++D DVH+GNGT E FY V+ S H P P
Sbjct: 139 NNISIGARHAQLKHGLSRVAIVDFDVHHGNGTQEIFYSDGSVVYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G DE G G F N PL G G A + ++PA+ +FEP +I++ G D+
Sbjct: 194 TGATDETGVGNIF----NAPLRAGDGGDELREAFRDRIIPAVDRFEPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + R + + A+R+ GRL+ V EGGY
Sbjct: 250 RDPLGSLSMTADDFGWATRELMAAAERHCEGRLVSVLEGGY 290
>gi|428672233|gb|EKX73147.1| conserved hypothetical protein [Babesia equi]
Length = 791
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 187/382 (48%), Gaps = 47/382 (12%)
Query: 50 HPENSDRIKNIVSILKRGPISPYI-------SWHSGIPAQIPQ---LLSFHTPDYIN--- 96
H E RI++I++ LK I I + IP+++ LL HT Y++
Sbjct: 33 HQERPFRIRSILNRLKCSTIDNNIGLNHKLWDYMEYIPSKLVSKEILLLCHTESYLDVVK 92
Query: 97 -------ELVEADKAGGKMV----C-----DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
EL + K GG+ V C + T + P S A LAVG+ +S ++ G
Sbjct: 93 HWTDHFKELYKT-KRGGRGVKNPPCLYPLDEDTYMTPDSGKVANLAVGSVISICDELIKG 151
Query: 141 H--GKIA--------YALVRPPGHHAQPTMADGYCFLNNAGLA-VQLALNSGCGKVVVID 189
+ GK++ +A+VRPPGHHA G+C NN +A + L ++ +ID
Sbjct: 152 YKDGKVSNSSSIRKGFAIVRPPGHHATSNRMMGFCIYNNIAIAAMYLRKQHELKRIAIID 211
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH GNGT E FY VL +S+H +P G++DE+GEG G YN+NIPL
Sbjct: 212 WDVHQGNGTQEIFYGDPNVLFVSIHRYGTGDDKFYPYIGSIDEMGEGPGLKYNVNIPLER 271
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
D ++A + +V+P + KF+P I++ G D++ D G L+ GY + +
Sbjct: 272 EFEDADLMYAFSSVVIPLLDKFKPEFILVSSGFDAAKGDLLGGCNLSPKGYAWATTKLCT 331
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL--NLPLALLSDPIAYYPEDEAFP-- 365
+AD+YS GRLL+V EGGY + C+ A E +L L + +D D A P
Sbjct: 332 IADKYSEGRLLLVLEGGYEPVMLSKCVEAVTEALLIHELNMGRTADIKEQKDSDLAKPST 391
Query: 366 VKVIESIKQYQ--NDVIPFLKG 385
+ + ++++ ND+IP K
Sbjct: 392 INICSALQKLLEINDIIPEFKS 413
>gi|167719111|ref|ZP_02402347.1| histone deacetylase family, putative [Burkholderia pseudomallei
DM98]
Length = 369
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAATDDDLRRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 214 GADERGAGTGTGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 274 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 331
>gi|227828343|ref|YP_002830123.1| histone deacetylase superfamily protein [Sulfolobus islandicus
M.14.25]
gi|227831101|ref|YP_002832881.1| histone deacetylase superfamily protein [Sulfolobus islandicus
L.S.2.15]
gi|229579986|ref|YP_002838386.1| histone deacetylase superfamily protein [Sulfolobus islandicus
Y.G.57.14]
gi|229581353|ref|YP_002839752.1| histone deacetylase superfamily protein [Sulfolobus islandicus
Y.N.15.51]
gi|229585574|ref|YP_002844076.1| histone deacetylase superfamily protein [Sulfolobus islandicus
M.16.27]
gi|238620536|ref|YP_002915362.1| histone deacetylase superfamily protein [Sulfolobus islandicus
M.16.4]
gi|284998600|ref|YP_003420368.1| histone deacetylase superfamily protein [Sulfolobus islandicus
L.D.8.5]
gi|385776671|ref|YP_005649239.1| histone deacetylase superfamily protein [Sulfolobus islandicus
REY15A]
gi|227457549|gb|ACP36236.1| histone deacetylase superfamily [Sulfolobus islandicus L.S.2.15]
gi|227460139|gb|ACP38825.1| histone deacetylase superfamily [Sulfolobus islandicus M.14.25]
gi|228010702|gb|ACP46464.1| histone deacetylase superfamily [Sulfolobus islandicus Y.G.57.14]
gi|228012069|gb|ACP47830.1| histone deacetylase superfamily [Sulfolobus islandicus Y.N.15.51]
gi|228020624|gb|ACP56031.1| histone deacetylase superfamily [Sulfolobus islandicus M.16.27]
gi|238381606|gb|ACR42694.1| histone deacetylase superfamily [Sulfolobus islandicus M.16.4]
gi|284446496|gb|ADB87998.1| histone deacetylase superfamily [Sulfolobus islandicus L.D.8.5]
gi|323475419|gb|ADX86025.1| histone deacetylase superfamily [Sulfolobus islandicus REY15A]
Length = 351
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 11/312 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HP S R +L+ +I+ P L H+ +YI + K G +
Sbjct: 21 HPFKSLRESMTKRLLEERSAFHFITLIEPKPISEEVLQLVHSKEYIEFVKYKSKEGQGYL 80
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFL 167
DG T G + AAL+ + ++ A++ ++ G G+ +A+ G HHA+ A G+C
Sbjct: 81 DDGDTPAFKGIYEAALIRISGSVKALE-LIKG-GEFNHAINIGGGFHHAKRNRAAGFCVF 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N+ L +L NS K+ ++DID H+ +GT E +KVL ISLHM H ++ P +
Sbjct: 139 NDVALIAKLGENS-FSKIAIVDIDGHHADGTQELLIDDDKVLKISLHMFHPNFFPG---S 194
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G V+E+G G+G GY +NIPLP GTGD GY+ A E+V+P I++++P +I+L+ G DS
Sbjct: 195 GDVNEIGVGKGEGYTINIPLPPGTGDDGYLLAFDEIVIPVIERYKPELIILITGGDSYFN 254
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH---ATLEGVL 344
DP L+ GY ++ V LA +YS GRL+++ GGY+ +A A + G+
Sbjct: 255 DPLVELKLSTHGYLDVVTKVHHLAHKYSSGRLIMLGGGGYNYDATARIWTISIAEIAGIY 314
Query: 345 NLPLALLSDPIA 356
+L L DP +
Sbjct: 315 DLEYETLHDPFS 326
>gi|170052821|ref|XP_001862395.1| histone deacetylase [Culex quinquefasciatus]
gi|167873617|gb|EDS37000.1| histone deacetylase [Culex quinquefasciatus]
Length = 1108
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 10/308 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-DKAGGKM 108
HPE RI I S + + P + A +L H+ ++N + ++ K
Sbjct: 533 HPEQPQRIARIFSRHEEYKLLPRMKRLKPRHATTDELCLVHSRQHVNVIRRTVEREEMKQ 592
Query: 109 VCD---GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
V D +P ++ A LA G+ L + VL+G + +VRPPGHHA+ M G+C
Sbjct: 593 VADKFNSVYFHPKTFECATLATGSVLQVVDEVLNGQSRSGVCIVRPPGHHAESDMPHGFC 652
Query: 166 FLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
NN +A Q A+ + G +V+++D DVH+GNGT F + KVL +S+H +
Sbjct: 653 IFNNVAIAAQYAIRDHGLKRVLIVDWDVHHGNGTQHIFESNPKVLYMSVHRYDNATFFPK 712
Query: 225 PQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
++ D +G G G G+N+NIP G GD+ Y A ++++P +F+P ++++ G D
Sbjct: 713 SKDANYDSVGNGTGEGFNVNIPWNKKGMGDQEYAAAFQQVILPIAYEFDPELVLVSAGFD 772
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
++ DP G +T + Y + SLA+ GR+++ EGGY+V +Y + + +
Sbjct: 773 AAIGDPLGGCKVTPEAYGHFTHWLSSLAN----GRVIVCLEGGYNVNSISYAMTLCTKSL 828
Query: 344 LNLPLALL 351
L PL +L
Sbjct: 829 LGDPLPML 836
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 158/328 (48%), Gaps = 44/328 (13%)
Query: 39 FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
+D G+ E E+ +R + + + + I P + A ++L+ HTP+ + E+
Sbjct: 119 WDDGYPECPERFTRVLERCRELKLVERCAVIEPRM-------ASEEEVLTKHTPEQL-EI 170
Query: 99 VEADKAGGKMVC--------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
+++ + + D ++P S+ +LL+ G+T+ + +L+G + A++R
Sbjct: 171 LKSTRGSQDVAALEELSSHYDAVFIHPSSYDCSLLSAGSTIELVDAILEGRVQNGMAIIR 230
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA +GYCF NN +A Q AL+ G +++V+D D+H+G GT FY +VL
Sbjct: 231 PPGHHAMKAEYNGYCFFNNVAIAAQHALDKRGLKRILVVDWDIHHGQGTQRMFYDDPRVL 290
Query: 210 TISLHMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPA 267
S+H G++ P+ + D +GEG G GYN N+PL G + Y+ +L++P
Sbjct: 291 YFSIHRYECGTFWPNL-RESDFDCIGEGAGLGYNFNVPLNRIGMTNGDYLAIWQQLLLPV 349
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ G+ +T Y + + SLA G++ +V EGGY
Sbjct: 350 ALE--------------------GQMEITPAFYPHLLSPLMSLAQ----GKVAVVLEGGY 385
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPI 355
+T A TL +L P LL + +
Sbjct: 386 CLTSLAEGGALTLRALLGDPCPLLVEKL 413
>gi|399984595|ref|YP_006564943.1| Histone deacetylase superfamily [Mycobacterium smegmatis str. MC2
155]
gi|399229155|gb|AFP36648.1| Histone deacetylase superfamily [Mycobacterium smegmatis str. MC2
155]
Length = 324
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 139/281 (49%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + L + + + + A++ H+ Y++ L A G +
Sbjct: 35 HPERPDRYRAVEMALAQSRFDDLLRVEAEL-AELDVTRYVHSNAYVDALEAARPTDGFVY 93
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W L VG TL A+ VLDG + A+ RPPGHHA+ A G+C
Sbjct: 94 LDGGDTMMEPSTWEVVLRGVGGTLQAVDSVLDGTAQNAFVACRPPGHHAETERAMGFCLF 153
Query: 168 NNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A L G +V ++D DVH+GNGT E FY V+ S H P P
Sbjct: 154 NNISIGARHAQLKHGLSRVAIVDFDVHHGNGTQEIFYSDGSVVYASTHQM-----PLFPG 208
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G DE G G F N PL G G A + ++PA+ +FEP +I++ G D+
Sbjct: 209 TGATDETGVGNIF----NAPLRAGDGGDELREAFRDRIIPAVDRFEPELIIVSAGFDAHE 264
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + R + + A+R+ GRL+ V EGGY
Sbjct: 265 RDPLGSLSMTADDFGWATRELMAAAERHCEGRLVSVLEGGY 305
>gi|56708883|ref|YP_164926.1| histone deacetylase/AcuC/AphA family protein [Ruegeria pomeroyi
DSS-3]
gi|56680568|gb|AAV97233.1| histone deacetylase/AcuC/AphA family protein [Ruegeria pomeroyi
DSS-3]
Length = 344
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 152/326 (46%), Gaps = 6/326 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E+ + + S++ ++ +S S P + H+ Y++ AGG
Sbjct: 15 HAESPESKRRFKSLMDVSGLTAQLSVQSAEPVTETDMARVHSEAYLDRFKTLSDAGGGNA 74
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL-N 168
+ + GS+ A L+ G A+ V+DG AYAL RPPGHHA + G+C L N
Sbjct: 75 GEFSPFGSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPGHHAMRDGSMGFCLLAN 134
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
A G +V V+D DVH+GNGT + FY VLTIS+H + P +G
Sbjct: 135 IAIAIEAARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQEN----CFPPGSG 190
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+ E G G G G NLN+ L G G + Y+ AM LV+PA+ F P +I++ G D++ FD
Sbjct: 191 SGSERGAGAGEGANLNVNLLPGAGHQSYIDAMDILVLPALHAFRPELIIVACGLDANNFD 250
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPL 348
P R + + R V A+ GGRL+ EGGY +C H + + +
Sbjct: 251 PLSRMTAHSGTFGYLTRAVMGAANDLCGGRLVCAHEGGYAEAVVPFCAHEVVRTLAGVES 310
Query: 349 ALLSDPIAYYPEDEAFPVKVIESIKQ 374
++ DP E P + +Q
Sbjct: 311 EVV-DPFRAVAEANQPPADFVAFQRQ 335
>gi|126454301|ref|YP_001066637.1| histone deacetylase family protein [Burkholderia pseudomallei
1106a]
gi|167815297|ref|ZP_02446977.1| histone deacetylase family, putative [Burkholderia pseudomallei 91]
gi|167845247|ref|ZP_02470755.1| histone deacetylase family, putative [Burkholderia pseudomallei
B7210]
gi|167900320|ref|ZP_02487721.1| histone deacetylase family, putative [Burkholderia pseudomallei
7894]
gi|167916885|ref|ZP_02503976.1| histone deacetylase family, putative [Burkholderia pseudomallei
112]
gi|167918512|ref|ZP_02505603.1| histone deacetylase family, putative [Burkholderia pseudomallei
BCC215]
gi|217421628|ref|ZP_03453132.1| histone deacetylase family protein [Burkholderia pseudomallei 576]
gi|242316889|ref|ZP_04815905.1| histone deacetylase family protein [Burkholderia pseudomallei
1106b]
gi|254189194|ref|ZP_04895705.1| histone deacetylase family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254261562|ref|ZP_04952616.1| histone deacetylase family protein [Burkholderia pseudomallei
1710a]
gi|254297304|ref|ZP_04964757.1| histone deacetylase family protein [Burkholderia pseudomallei 406e]
gi|386861415|ref|YP_006274364.1| histone deacetylase family protein [Burkholderia pseudomallei
1026b]
gi|403519066|ref|YP_006653200.1| histone deacetylase family protein putative [Burkholderia
pseudomallei BPC006]
gi|418533686|ref|ZP_13099545.1| histone deacetylase family protein [Burkholderia pseudomallei
1026a]
gi|126227943|gb|ABN91483.1| histone deacetylase family protein [Burkholderia pseudomallei
1106a]
gi|157807910|gb|EDO85080.1| histone deacetylase family protein [Burkholderia pseudomallei 406e]
gi|157936873|gb|EDO92543.1| histone deacetylase family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|217395370|gb|EEC35388.1| histone deacetylase family protein [Burkholderia pseudomallei 576]
gi|242140128|gb|EES26530.1| histone deacetylase family protein [Burkholderia pseudomallei
1106b]
gi|254220251|gb|EET09635.1| histone deacetylase family protein [Burkholderia pseudomallei
1710a]
gi|385360646|gb|EIF66560.1| histone deacetylase family protein [Burkholderia pseudomallei
1026a]
gi|385658543|gb|AFI65966.1| histone deacetylase family protein [Burkholderia pseudomallei
1026b]
gi|403074709|gb|AFR16289.1| histone deacetylase family protein putative [Burkholderia
pseudomallei BPC006]
Length = 369
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAATDDDLRRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 214 GADERGAGAGAGSNVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 274 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 331
>gi|307153733|ref|YP_003889117.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7822]
gi|306983961|gb|ADN15842.1| histone deacetylase superfamily [Cyanothece sp. PCC 7822]
Length = 307
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 158/328 (48%), Gaps = 35/328 (10%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ + + L HDTG HPE R+ IV LK P + + WH
Sbjct: 4 IIYSEEFLKHDTGL----------------YHPETPGRLSAIVEALKETPWADQLEWHLP 47
Query: 79 IPAQIPQLLS----FHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
PA+ + S FHT +YIN L K GG M+ T ++P S+ ALLAV L +
Sbjct: 48 TPAKEKEAFSWVSKFHTRNYINYLQSLAKEGGGMLDPDTPVSPLSYDIALLAVSAWLDGV 107
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVH 193
VL H + A+ALVRPPGHHA TM G+C +NA +A AL G KV ++D DVH
Sbjct: 108 DMVLKNH-QPAFALVRPPGHHATKTMGMGFCLFSNAAIAAHYALEKKGINKVAILDWDVH 166
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
+GNGT E + ++ SLH P +P G + G + LNIPLP G
Sbjct: 167 HGNGTEELVEGNPHIVYCSLHQF-----PCYPGTGRASDRGHYDNV---LNIPLPPGCTL 218
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
+ Y + ++P +++F P+++++ G D++ DP L Y R + L
Sbjct: 219 KEYEPMFEKKIMPFLERFSPDLLLVSAGYDANHDDPLAMMSLQPPDYGVFTRYLLGLTR- 277
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLE 341
R+L EGGY++ + + AT+E
Sbjct: 278 ----RILFGLEGGYNLEVMSQSVVATVE 301
>gi|76812059|ref|YP_333884.1| histone deacetylase family protein [Burkholderia pseudomallei
1710b]
gi|76581512|gb|ABA50987.1| histone deacetylase family protein [Burkholderia pseudomallei
1710b]
Length = 340
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 152/298 (51%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 9 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAATDDDLRRIHPAHYLDAFKRASDAGGGDL 68
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 69 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 128
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + + P +
Sbjct: 129 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDR-CFPPGY---S 184
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 185 GADERGAGAGAGSNVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 244
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 245 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 302
>gi|134277132|ref|ZP_01763847.1| histone deacetylase family protein [Burkholderia pseudomallei 305]
gi|134250782|gb|EBA50861.1| histone deacetylase family protein [Burkholderia pseudomallei 305]
Length = 369
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAAADDDLRRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 214 GADERGAGAGAGSNVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 274 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 331
>gi|421747787|ref|ZP_16185460.1| acetylpolyamine aminohydrolase, histone deacetylase superfamily
protein, partial [Cupriavidus necator HPC(L)]
gi|409773550|gb|EKN55326.1| acetylpolyamine aminohydrolase, histone deacetylase superfamily
protein, partial [Cupriavidus necator HPC(L)]
Length = 315
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 177/346 (51%), Gaps = 46/346 (13%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
+AA+P +P + D +D + L GF+PG +EVL
Sbjct: 6 LAAAPDYGRAPLETVHSAAYLDFLCEAYDRWQALARPGFEPG-IEVLPN----------- 53
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAG---GKMVCDGTVLNP 117
+SPY H+G +L PD + V A +AG G + C L P
Sbjct: 54 --------LSPY---HNG------KLEQNRRPDCPTDSVIA-QAGYYLGDLSCP---LGP 92
Query: 118 GSWGAALLAVGTTLSAMKHVLDG-HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQL 176
SW + L + + ++A +V + G +AYAL RP GHHA A G+C++NNA +A Q
Sbjct: 93 QSWRSILRSAHSAVAAADYVCEQPDGGMAYALCRPSGHHAHSDRAGGFCYVNNAAIAAQG 152
Query: 177 ALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEG 236
L GKV V+D+D H+G+GT + FY+ + V+TISLH + + P + G +E G G
Sbjct: 153 LLKR-FGKVAVLDVDAHHGDGTQQIFYQRSDVMTISLHADPAGYYPFY--TGYANERGYG 209
Query: 237 EGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLT 296
G+GYNLN PLP+GTGD G++ A+ + + A++ + P +VL +G D+ DP +
Sbjct: 210 AGYGYNLNFPLPHGTGDAGFLAAL-DSALDALRDYRPQALVLSLGFDTYVDDPISVLAVG 268
Query: 297 MDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
MDGYR +G + +L G ++VQEGGY V L A L G
Sbjct: 269 MDGYRGIGERIHAL-----GVPTVVVQEGGYEVEAIGPALDAFLSG 309
>gi|357519987|ref|XP_003630282.1| Histone deacetylase [Medicago truncatula]
gi|355524304|gb|AET04758.1| Histone deacetylase [Medicago truncatula]
Length = 420
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 23/315 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPI------SPYISWHSGIPAQIPQLLSFHTPDYINELVEA 101
E HPE+ R+ IV+ L++ + S I + PA + S H Y++ L +
Sbjct: 75 ESHPESHFRVPAIVTALQQMKLTSKFRGSEVIELQNFEPASTDDIASVHARAYVSGLEKV 134
Query: 102 -DKA--GGKMVCDG---TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA-----YALVR 150
D+A G +V DG T ++ +++A G L+ + V+ + +AL+R
Sbjct: 135 MDQALEKGLIVVDGSGPTYATSTTFQESIVAAGAGLALVDSVVAASKIMKDPPTGFALIR 194
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A G +V +ID DVH+GNGT + FY V
Sbjct: 195 PPGHHAIPKGPMGFCIFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVF 254
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + S+P G DE+G G+G G LN+PLP G+GD E+VVP Q
Sbjct: 255 FLSFHQD-----GSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDTAIRSVFDEVVVPCAQ 309
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D DP LT Y + ++ LA GGR + EGGY++
Sbjct: 310 RFKPDIILVSAGYDGHVLDPLANLQLTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNL 369
Query: 330 TYSAYCLHATLEGVL 344
+Y + T +L
Sbjct: 370 KSLSYSVADTFRALL 384
>gi|224083458|ref|XP_002307035.1| histone deacetylase [Populus trichocarpa]
gi|222856484|gb|EEE94031.1| histone deacetylase [Populus trichocarpa]
Length = 390
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 167/347 (48%), Gaps = 25/347 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPI------SPYISWHSGIPAQIPQLLSFHTPDYINELVEA 101
E HPE+ R+ IVS L++ + S I PA + + + H Y+ L +A
Sbjct: 45 EAHPESYLRVPAIVSALEKAELTSKFRGSEIIELQDFKPASLDDIANVHARAYVAGLEKA 104
Query: 102 -DKAG--GKMVCDG---TVLNPGSWGAALLAVGTTLSAMKHVLDGHG-----KIAYALVR 150
D+A G + DG T ++ +L+A G L+ + V+ +AL+R
Sbjct: 105 MDQASEQGIIYIDGSGPTYATATTFRESLVAAGAGLTLVDSVVAASNCSQNPPTGFALIR 164
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A L G +V +ID DVH+GNGT + F+ +
Sbjct: 165 PPGHHAIPKGPMGFCVFGNVAIAARHAQLVHGLKRVFIIDFDVHHGNGTNDAFFDDPDIY 224
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + S+P G +DE+G G+G G LN+PLP G+GD E++VP+ Q
Sbjct: 225 FLSTHQDG-----SYPGTGKIDEIGHGDGEGTTLNLPLPGGSGDISMRTVFDEVIVPSAQ 279
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D+ DP G T Y + ++ LA GGR + EGGY++
Sbjct: 280 RFKPDIILVSAGYDAHVLDPLGSLQFTTGTYYTLASNIKELAKDLCGGRCVFFLEGGYNL 339
Query: 330 TYSAYCLHATLEGVLNLP--LALLSDPIAYYPEDEAFPVKVIESIKQ 374
+Y + + L + +P Y E + I+ +K
Sbjct: 340 DSLSYSVTDSFRAFLGEKSLASEFDNPAILYEEPSTKVKQAIQRVKH 386
>gi|167581566|ref|ZP_02374440.1| histone deacetylase family, putative [Burkholderia thailandensis
TXDOH]
Length = 369
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S PA LL H Y+ A GG +
Sbjct: 38 YAESPDSKRRLLSLVYASGLAARLDMSSAPPATDDDLLRIHPAHYLEAFKRASDTGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERAANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQAIYYDDADTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++V+ G D++A D
Sbjct: 214 GADERGAGAGVGANINVPLLAGAGDDAYRYAFERIVLPALDAFRPELVVVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
P R L D YR M +++ A R+ GRL++V EGGY Y +C A +E +
Sbjct: 274 PLARMQLHSDSYRFMTHALKAAAQRHCAGRLVVVHEGGYSEAYVPFCGQAIVEAL 328
>gi|356512844|ref|XP_003525125.1| PREDICTED: histone deacetylase 14-like [Glycine max]
Length = 417
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 166/349 (47%), Gaps = 29/349 (8%)
Query: 48 EKHPENSDRIKNIVSILK--------RGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
E HPE+ R+ IV+ L+ RGP I PA + + S H Y++ L
Sbjct: 72 ESHPESHFRVPAIVNALEEMQLTSKFRGP--EVIELQHFEPASVDDIASVHARAYVSGLE 129
Query: 100 EA-DKA--GGKMVCDG---TVLNPGSWGAALLAVGTTLSAMKHV-----LDGHGKIAYAL 148
+ D+A G + DG T ++ +++A G L+ + V + G +AL
Sbjct: 130 KVMDQAVEKGLIFLDGSGPTYATATTFQESIVAAGAGLALVDSVVACSKIKGDAPTGFAL 189
Query: 149 VRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNK 207
+RPPGHHA P G+C N +A + + G +V +ID DVH+GNGT + FY
Sbjct: 190 IRPPGHHAVPQGPMGFCIFGNVAIAARYSQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPD 249
Query: 208 VLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
V +S H + S+P G DE+G G+G G LN+PLP G+GD E++VP
Sbjct: 250 VFFLSFHQD-----GSYPGTGKFDEVGSGDGEGTTLNLPLPGGSGDTAIRTVFDEVIVPC 304
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
Q+F+P++I++ G D DP T Y + ++ LA GGR + EGGY
Sbjct: 305 AQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGY 364
Query: 328 HVTYSAYCLHATLEGVL-NLPLAL-LSDPIAYYPEDEAFPVKVIESIKQ 374
++ +Y + T +L + LA +P Y E + I+ IK
Sbjct: 365 NLKSLSYSVADTFRALLGDRSLASEFDNPNILYEEPSTKVKQAIQKIKH 413
>gi|356564935|ref|XP_003550702.1| PREDICTED: histone deacetylase 5-like [Glycine max]
Length = 652
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 186/357 (52%), Gaps = 38/357 (10%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--------- 98
E HPEN +RI+ I + L+ + A+ LL H+ +++N +
Sbjct: 32 EDHPENPNRIRAIWNRLQSAGVLQRCVILEAKEAEDKHLLLVHSINHVNLIKNISSKQFN 91
Query: 99 VEADKAGGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
K K+ G++ N GS AA LA G+ + +K V A A+VRPPGHHA+
Sbjct: 92 SRRHKIASKL---GSIYFNEGSSEAAYLAAGSAVEVVKRVASRELDSAVAIVRPPGHHAE 148
Query: 158 PTMADGYCFLNNAGLAVQLALNS----GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
A G+C NN +A + L+ G K++++D DVH+GNGT + F+ ++VL S+
Sbjct: 149 QQEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSV 208
Query: 214 HMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVHAMTELVVPAIQKF 271
H + GS+ P++ +G +GEG G GYN+N+P NG GD Y +++P ++F
Sbjct: 209 HRHEFGSFYPAN-DDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEF 267
Query: 272 EPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY 331
P++I++ G D++ DP G +T GY + + + A+ GR++++ EGGY++
Sbjct: 268 NPDIIIVSAGFDAAVGDPLGGCLVTPFGYSVLLEKLMNFAE----GRIVLILEGGYNLDS 323
Query: 332 SAYCLHATLEGVLNLPLALLSD-PIAYYPEDEAFPV----KVIESIKQYQNDVIPFL 383
+ +HA LE LL+D P+ EA+P +VI++++Q + P L
Sbjct: 324 ISKSMHACLE-------VLLADQPV--IGSAEAYPFESTWRVIQAVRQVLSPFWPTL 371
>gi|320583009|gb|EFW97225.1| Putative catalytic subunit of a class II histone deacetylase
complex [Ogataea parapolymorpha DL-1]
Length = 716
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 182/371 (49%), Gaps = 45/371 (12%)
Query: 43 FLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSFH 90
+ E ++ HPE+ RI I IL + P +S I A ++L H
Sbjct: 62 YFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGRDQIGDLMVKIPVREASAEEILLVH 121
Query: 91 TPDYI------NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
TP+++ ++ + + D N S +A L+ G + A K V++G K
Sbjct: 122 TPEHLRFIESTQQMTKEELMAHTEKGDSVYFNNDSLLSAKLSCGGAIEACKAVVEGRVKN 181
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEG 201
A A+VRPPGHHA+P G+C +N +A + L S ++V++D DVH+GNGT +
Sbjct: 182 ALAVVRPPGHHAEPDAPGGFCLFSNVAVAAKSILASYPESVRRIVIVDWDVHHGNGTQKA 241
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHA 259
F+ +VL ISLH HG + P + G D++G G G G+N+NIP P G GD Y++A
Sbjct: 242 FFDDPRVLYISLHRYEHGKYYPG-TKAGGADQVGSGAGEGFNVNIPWPVGGVGDADYIYA 300
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F P+++++ G D++ D G ++ GY M ++SLA G L
Sbjct: 301 FNRVIMPVCHEFAPDLVIISSGFDAADGDIIGGCHVSPAGYGHMTHALKSLAK----GNL 356
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPED------EAFPVKVIESIK 373
+V EGGY+ L A L + LL +P PE+ + ++VI+ +
Sbjct: 357 CVVLEGGYN-------LDAIASSALRVAKVLLGEP----PEELKSVQLKTETIEVIDDVI 405
Query: 374 QYQNDVIPFLK 384
+ Q+ LK
Sbjct: 406 KIQSQYWKTLK 416
>gi|323331992|gb|EGA73404.1| Hda1p [Saccharomyces cerevisiae AWRI796]
Length = 641
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S IP A ++L
Sbjct: 10 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEV 69
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 70 HTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 129
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 130 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 189
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 190 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 248
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 249 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 304
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP++ P+ E + KVI +Y
Sbjct: 305 LCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLS-DPKPEVIEIIDKVIRLQSKYW 363
Query: 377 N 377
N
Sbjct: 364 N 364
>gi|365763369|gb|EHN04898.1| Hda1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 706
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S IP A ++L
Sbjct: 75 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPXLSGVDDLGDLMLKIPVRAATSEEILEV 134
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 135 HTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 194
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 195 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 254
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 255 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 313
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 314 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 369
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP++ P+ E + KVI +Y
Sbjct: 370 LCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLS-DPKPEVIEIIDKVIRLQSKYW 428
Query: 377 N 377
N
Sbjct: 429 N 429
>gi|94310563|ref|YP_583773.1| putative acetylpolyamine aminohydrolase [Cupriavidus metallidurans
CH34]
gi|93354415|gb|ABF08504.1| putative acetylpolyamine aminohydrolase [Cupriavidus metallidurans
CH34]
Length = 357
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 143/250 (57%), Gaps = 16/250 (6%)
Query: 98 LVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL---DGHGKIAYALVRPPGH 154
+ EA G + C L P SW + L + + ++A +HV DG+G +AYAL RP GH
Sbjct: 117 IAEAGYYLGDLSCP---LGPHSWQSILRSAHSAVAAARHVCAPHDGNG-MAYALCRPSGH 172
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA A G+C++NN+ +A Q L KV V+D+D H+G+GT + FY+ + V+TISLH
Sbjct: 173 HAHADRAGGFCYVNNSAIAAQTLLER-FDKVAVLDVDAHHGDGTQQIFYQRSDVMTISLH 231
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+ S+ P + G E G G G+GYNLN PLP+GTGD G++ A+ + + A++ + P
Sbjct: 232 ADPSSYYPFY--TGYATERGHGAGYGYNLNFPLPHGTGDAGFLSAL-DSALDALRDYRPQ 288
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
+VL +G D+ DP + ++ YR +G + +L G ++VQEGGY V
Sbjct: 289 ALVLALGFDTYKHDPISVLQVGLEAYRGVGERIHAL-----GVPTVVVQEGGYEVDAIGI 343
Query: 335 CLHATLEGVL 344
L A L G +
Sbjct: 344 ALEAFLAGFV 353
>gi|50290843|ref|XP_447854.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527165|emb|CAG60803.1| unnamed protein product [Candida glabrata]
Length = 693
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 185/359 (51%), Gaps = 31/359 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S + I A ++L
Sbjct: 62 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVNDIGDLMLKIPIRAATAEEILEV 121
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ + + +K + + D N S+ + L G + A K V++G K
Sbjct: 122 HSKEHLEFIEKTEKMNREELLKETEKGDSVYFNNDSYATSRLPCGGAIEACKAVVEGRVK 181
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D DVH+GNGT +
Sbjct: 182 NSLAVVRPPGHHAEPEAAGGFCLFSNVAVAAKNILKNYPESVRRILILDWDVHHGNGTQK 241
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY ++VL ISLH G + P Q G D++GEG+G G+N NI P G GD Y+
Sbjct: 242 AFYDDDRVLYISLHRFELGKYYPGTIQ-GQYDQIGEGKGKGFNCNITWPVGGVGDAEYMW 300
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 301 AFEQVVMPMGREFQPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLAR----GN 356
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQY 375
L +V EGGY++ A + + ++ P L DP+ P+ EA + KVI +Y
Sbjct: 357 LCVVLEGGYNLDAIAISALSVAKILIGEPPDELPDPLR-EPKAEALEIIDKVISLQSKY 414
>gi|418735717|ref|ZP_13292126.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410748656|gb|EKR01551.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 313
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 146/283 (51%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H ENSDR+ ++ L + S + +P++ H+ ++ ++ + G
Sbjct: 22 HYENSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEF--FNEIHSSAHLQKIERSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW AA A + ++ ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWIAAYSAANSGITLADALISGTIKNGFSLLRPPGHHAEHNRIMGFCML 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 139 NNVAITARYLQKNGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ EG G NIP+ + ++ Y+ E+V+P ++ FEP+++++ G D+
Sbjct: 194 GLSSETGKNEGIGTTKNIPMQANSDNQAYIQKFKEVVIPTMEHFEPDIVLISAGFDAHKE 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV AD+ G++L EGGY++T
Sbjct: 254 DPLGEMDITTKGFEDLTKIVLESADKICEGKVLSFLEGGYNLT 296
>gi|323335783|gb|EGA77063.1| Hda1p [Saccharomyces cerevisiae Vin13]
Length = 706
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S IP A ++L
Sbjct: 75 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEV 134
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 135 HTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 194
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 195 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 254
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 255 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 313
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 314 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 369
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP++ P+ E + KVI +Y
Sbjct: 370 LCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLS-DPKPEVIEIIDKVIRLQSKYW 428
Query: 377 N 377
N
Sbjct: 429 N 429
>gi|257386631|ref|YP_003176404.1| histone deacetylase superfamily protein [Halomicrobium mukohataei
DSM 12286]
gi|257168938|gb|ACV46697.1| histone deacetylase superfamily [Halomicrobium mukohataei DSM
12286]
Length = 335
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 165/333 (49%), Gaps = 34/333 (10%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY--IS 74
+N + + L+HDTG +HPE++DR++ I +RG ++ Y +
Sbjct: 1 MNFGYREVCLDHDTGP----------------RHPESADRLRAI----RRG-LAEYHGVE 39
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
+ + A + H PDY+ E+ + GG TV +W AAL + G A
Sbjct: 40 YVAAGDADEELICKVHDPDYVEEIKAFCQEGGGNWDADTVAVEDTWKAALASAGLAEWAA 99
Query: 135 KHVLDGHG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDV 192
LDG + +AL RPPGHHA A G+CF++NA +A Q AL+ G V + D DV
Sbjct: 100 LSALDGDDGRETPFALGRPPGHHAVADDAMGFCFVDNAVVAAQSALDEGADGVAIFDWDV 159
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
H+GNGT + Y + + S+H +P G VDE G G+G LN+P G
Sbjct: 160 HHGNGTQDICYDRDDIFYASIHEE-----GLYPGTGEVDETGTGDGAMRTLNVPYDPGAD 214
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
Y+ A+ EL+ P I+ F+P+++++ G D+ DP R ++ +GY + + +R L D
Sbjct: 215 TVDYLAAVDELIAPEIESFDPDLLLVSAGFDAHRHDPISRMRVSSEGYGLLTQRMRDLTD 274
Query: 313 RYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
R G L V EGGY +T S +H +G
Sbjct: 275 RCDAG-LGFVLEGGYSLDTLTDSLTTVHEVFDG 306
>gi|449531388|ref|XP_004172668.1| PREDICTED: histone deacetylase 5-like, partial [Cucumis sativus]
Length = 365
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 180/365 (49%), Gaps = 38/365 (10%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ V +DD M H T G + HPEN RI+ I + L I
Sbjct: 21 LGVLYDDRMCKHHTPDGDY--------------HPENPYRIRAIWNKLHSAGILQRCVVL 66
Query: 77 SGIPAQIPQLLSFHTPDYINELVE---------ADKAGGKMVCDGTVLNPGSWGAALLAV 127
G A+ +L+ H+ +++ + E DK K+ + N GS A+ LA
Sbjct: 67 KGKEAEDKHILAVHSKNHVKLIKEISSKEFDSRRDKIASKL--NSIYFNEGSSEASYLAA 124
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCG 183
G+ + + V G A+VRPPGHHA+ A G+C NN +A LN G
Sbjct: 125 GSVIDVAEKVAKGDLDSGIAIVRPPGHHAEHDEAMGFCLFNNIAVAASFILNERPDLGIK 184
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYN 242
K++++D DVH+GN T + F+ +VL S+H + +GS+ P+ +G ++GEG G GYN
Sbjct: 185 KILIVDWDVHHGNATQKMFWEDPRVLFFSVHRHEYGSFYPA-THDGFYTKVGEGPGAGYN 243
Query: 243 LNIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYR 301
+N+P NG GD Y+ +++P +++ P+MI++ G D++ DP G C+T GY
Sbjct: 244 INVPWENGRCGDADYLAVWDHILLPVAEEYNPDMIMVSAGFDAAVGDPLGGCCVTPYGYS 303
Query: 302 EMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPED 361
M + + +LA G++++ EGGY++ A + A E L L ++ P YP +
Sbjct: 304 IMLKKLMNLAQ----GKIVLALEGGYNLDSIASSMLACAE--LLLDGRTVNKPQETYPFE 357
Query: 362 EAFPV 366
+ V
Sbjct: 358 STWQV 362
>gi|297789218|ref|XP_002862598.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308222|gb|EFH38856.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 576
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 173/349 (49%), Gaps = 47/349 (13%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+D+ M HDT G D E DRI+ I L+ ++ G
Sbjct: 5 YDETMCKHDTPNGEVDV--------------ECPDRIRFIWEKLQLAGVTQRCVVLGGSK 50
Query: 81 AQIPQLLSFHTPDYIN-----ELVEADKAGGKM--VCDGTVLNPGSWGAALLAVGTTLSA 133
A+ L HT ++N + D ++ V D LN GS AA LA G+ ++
Sbjct: 51 AEDKHLKLVHTKKHVNFVKSISTKQKDSRRNRIASVLDSIYLNGGSSEAAYLAAGSVVNV 110
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGKVVVID 189
+ V +G +A+VRPPGHHA+ A G+C NN +A LN K++++D
Sbjct: 111 AEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASYLLNERPDLDVKKILIVD 170
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHM------------NHGSWGPSHPQNGTVDELGEGE 237
D+H+GNGT + F++ +VL S+H +HGS+ P+ +G + +GEG
Sbjct: 171 WDIHHGNGTQKMFWKDPRVLIFSVHRFKVAGNAYVARYDHGSFYPA-GDDGDYNMVGEGP 229
Query: 238 GFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLT 296
G G+N+N+P G GD Y+ A +++P ++F P++I+L G D++ DP G C+T
Sbjct: 230 GKGFNINVPWEQGGCGDADYLAAWDHILIPVTKEFNPDIILLSAGFDAAIGDPLGGCCVT 289
Query: 297 MDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV----TYSAYCLHATLE 341
DGY M ++ L + ++ G++++ EGGY++ S C+ LE
Sbjct: 290 PDGYSVM---LKKLME-FAQGKIVLALEGGYNLESLAKSSLACVQVLLE 334
>gi|190409024|gb|EDV12289.1| histone deacetylase [Saccharomyces cerevisiae RM11-1a]
gi|256269484|gb|EEU04772.1| Hda1p [Saccharomyces cerevisiae JAY291]
gi|290770994|emb|CAY82163.2| Hda1p [Saccharomyces cerevisiae EC1118]
Length = 706
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S IP A ++L
Sbjct: 75 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEV 134
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 135 HTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 194
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 195 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 254
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 255 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 313
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 314 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 369
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP++ P+ E + KVI +Y
Sbjct: 370 LCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLS-DPKPEVIEIIDKVIRLQSKYW 428
Query: 377 N 377
N
Sbjct: 429 N 429
>gi|323352514|gb|EGA85014.1| Hda1p [Saccharomyces cerevisiae VL3]
Length = 706
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S IP A ++L
Sbjct: 75 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEV 134
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 135 HTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 194
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 195 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 254
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 255 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 313
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 314 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 369
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP++ P+ E + KVI +Y
Sbjct: 370 LCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLS-DPKPEVIEIIDKVIRLQSKYW 428
Query: 377 N 377
N
Sbjct: 429 N 429
>gi|452943840|ref|YP_007500005.1| Histone deacetylase [Hydrogenobaculum sp. HO]
gi|452882258|gb|AGG14962.1| Histone deacetylase [Hydrogenobaculum sp. HO]
Length = 379
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 148/279 (53%), Gaps = 16/279 (5%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEAD---KA 104
+ HP R+ +++ LK + + + G A I +LL FHT DYI L+EAD KA
Sbjct: 17 KNHPLRVPRVSLMINYLK--ALGFDVDYLEGRDASIEELLIFHTKDYIEALIEADRMMKA 74
Query: 105 GGKM---VCDGTVLNP---GSWGAALLAVGTTLSAMKHVLDGHG-KIAYALVRPPG--HH 155
M GT+ NP G W +LLA G+++ A++ + H + + P G HH
Sbjct: 75 TNYMREKYAIGTIENPVSAGMWKGSLLATGSSVQAVEFYIKNHKTENEFVAFNPAGGMHH 134
Query: 156 AQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A + A+G+CFLN+ +++ G K++ ID+D H+ +G E FY S V ISLH
Sbjct: 135 AMKSRANGFCFLNDPVISILHLQKHGFKKIMYIDLDAHHPDGVQEAFYNSADVFLISLHQ 194
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+ P H G DELGEGEGFG+N+NIPLP D ++HA+ + + A +KF P+
Sbjct: 195 SPEYAFPFHV--GYADELGEGEGFGFNMNIPLPKEINDNDFLHALEKAIEIATKKFTPDA 252
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
V+ +G D+ D + L+ + Y + I+R ++
Sbjct: 253 FVIQMGVDAVKEDYLSKFSLSNNIYIKAIDIIRKYTKKF 291
>gi|451980726|ref|ZP_21929112.1| putative Deacetylase, histone deacetylase family [Nitrospina
gracilis 3/211]
gi|451762062|emb|CCQ90351.1| putative Deacetylase, histone deacetylase family [Nitrospina
gracilis 3/211]
Length = 311
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 7/309 (2%)
Query: 39 FDPGFLE-VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINE 97
+ P FLE HPEN R++ I L+ ++ + PA ++ H Y++
Sbjct: 8 YHPLFLEHETGSHPENPGRLRAITQKLEESGLASRLPTLEPRPATAEEIALNHPEKYMDS 67
Query: 98 LVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
+ A ++G + T ++ S+ +ALLA G L+A+ V+DG + VRPPGHHA+
Sbjct: 68 VARACESGMSRLDMDTAISTKSYDSALLAAGAGLTAVDAVVDGACDNVFCAVRPPGHHAE 127
Query: 158 PTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
T + G+C NN +A + AL +V + D DVH+GNGT FY + S H
Sbjct: 128 ETRSMGFCLFNNVAVAARYALAKKDLNRVFIFDWDVHHGNGTQHSFYADPNIYYSSTHQ- 186
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
P +P G DE G G+G G LN P+ + D Y+ + + +VP + +F+P++I
Sbjct: 187 ----FPFYPGTGDKDETGTGDGLGTTLNFPMRAFSNDADYISVVKDKLVPEMFRFKPDLI 242
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D+ DP LT + + EM R++R AD GRL+ + EGGY+ A +
Sbjct: 243 IISSGFDAHEDDPLANVSLTTECFGEMTRLIRGAADEICRGRLISMLEGGYNYEALADSV 302
Query: 337 HATLEGVLN 345
+ LE +L+
Sbjct: 303 YIHLENLLS 311
>gi|321473004|gb|EFX83972.1| putative histone deacetylase HDAC6 protein [Daphnia pulex]
Length = 1022
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 170/343 (49%), Gaps = 26/343 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI +I L + A +LL H DYI+E+ A AG K
Sbjct: 490 HPERPARITSIYQKLMEFGVLERCHRLDARDADREELLWLHQADYIDEI--AATAGKKQS 547
Query: 110 CDGTV--------LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
+ + P ++ AALL+ G++L ++ +L G + +VRPPGHHA+ A
Sbjct: 548 TLNQLERQYGSIFICPETYQAALLSAGSSLQIVESILSGESRSGIGVVRPPGHHAECDEA 607
Query: 162 DGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSW 220
G+CF NN LA + A+ +++++D DVH+GNG F +VL ISLH
Sbjct: 608 YGFCFFNNTALAAKYAIEIHHLERILIVDWDVHHGNGIQRMFEEDPRVLYISLH--RFDI 665
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P P+ +G G G GY +NI P G GD Y+ A ++++P ++ P ++++
Sbjct: 666 FPFKPEESDCSVVGSGSGAGYTVNIAWPKRGMGDTEYLAAFQQIIMPIAYQYNPQLVLVA 725
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G D++ DP G +T +GY +M ++ SLA GR+ I+ EGGY++ ++ +
Sbjct: 726 AGFDAAQGDPLGGCKITPEGYGQMTNMLSSLAQ----GRVAILLEGGYNLDSISHSMTMC 781
Query: 340 LEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPF 382
+ ALL DP+ P E I +IKQ + ++P+
Sbjct: 782 AK-------ALLGDPLP-SPRIEPLNPAAISTIKQVVSHLLPY 816
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 172/373 (46%), Gaps = 44/373 (11%)
Query: 14 EGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYI 73
G + +D+ M+ H +DP + E E+ +R + + I P
Sbjct: 42 RGKTGIVYDERMVEHQCL-------WDPNYPECPERFTRVLERCREYGLAQRCVEIQPR- 93
Query: 74 SWHSGIPAQIPQLLSFHTPDYIN-----------ELVEADKAGGKMVCDGTVLNPGSWGA 122
A +LL HTPD I E +EA +G D ++P +
Sbjct: 94 ------KATQDELLKLHTPDRIELLKGTDGSPDAEALEAISSGY----DAIYIHPSTNEL 143
Query: 123 ALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSG 181
ALLA G+T+ + +LDG + A++RPPGHHA + GYCF NN +A Q AL N G
Sbjct: 144 ALLAAGSTVEMVDALLDGKIQNGMAVIRPPGHHAMKSEYCGYCFFNNVAVAAQHALDNKG 203
Query: 182 CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFG 240
K++++D DVH+G T + FY +VL S+H HG++ P+ + +G G G G
Sbjct: 204 VEKILIVDWDVHHGQATQQMFYEDPRVLYFSVHRYEHGAFWPN-LRESDFHYIGSGAGKG 262
Query: 241 YNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+N+PL G+ Y+ +L++P +F+P +I++ G D++ G +T
Sbjct: 263 FNVNVPLNKTKMGNADYLAIWHQLLLPLAYEFQPELIIVSAGYDAALGCFEGEMEITPAC 322
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYP 359
Y + + LA G+L +V EGG YCL + EG LL DP
Sbjct: 323 YSHLTSSLMGLAQ----GKLAVVLEGG-------YCLKSLAEGAALTLRTLLGDPCPVIA 371
Query: 360 EDEAFPVKVIESI 372
+ E + ESI
Sbjct: 372 KIEQPCQSIQESI 384
>gi|403217120|emb|CCK71615.1| hypothetical protein KNAG_0H02010 [Kazachstania naganishii CBS
8797]
Length = 693
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 190/364 (52%), Gaps = 41/364 (11%)
Query: 42 GFLEVLEKHPENSDRIKNIVSIL-KRGPIS-PYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + G I+ P +S I A ++L
Sbjct: 60 SYFEYIDPHPEDPRRIYRIYKILAENGLITDPMLSGIDDIGDLMLKIPVREATSQEVLEV 119
Query: 90 HTPDYI-----------NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
H+ +++ +EL+++ + G D N S +A L+ G + A K V+
Sbjct: 120 HSKEHLEFIESVTKMSHDELLKSTETG-----DSVYFNNDSSSSAKLSCGGAIEACKAVV 174
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYG 195
+G K A+A+VRPPGHH++P A G+C +N +A + L + +++++D D+H+G
Sbjct: 175 EGRVKNAFAVVRPPGHHSEPESAGGFCLFSNVAVASKNILRNYPESVRRIMILDWDIHHG 234
Query: 196 NGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGD 253
NGT + FY ++VL ISLH G + P Q G D+ GEG+G G+N NI P G GD
Sbjct: 235 NGTQKAFYDDDRVLYISLHRFELGKYYPGTAQ-GHYDKTGEGKGEGFNCNITWPVGGVGD 293
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y+ A ++V+P ++F P+++++ G D++ D G+ ++ Y M +++SLA+
Sbjct: 294 AEYMWAFEQVVMPMSREFRPDLVIISAGFDAADGDTIGQCHVSPSCYGHMTHMLKSLAN- 352
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIES 371
G L +V EGGY++ A + + ++ P L DP+ P+ EA + KVI
Sbjct: 353 ---GNLCVVLEGGYNLDAIARSALSVAKVLIGEPPEELLDPVK-DPKPEAIEIINKVIRL 408
Query: 372 IKQY 375
+Y
Sbjct: 409 QSKY 412
>gi|194689096|gb|ACF78632.1| unknown [Zea mays]
gi|223975929|gb|ACN32152.1| unknown [Zea mays]
gi|414590783|tpg|DAA41354.1| TPA: histone deacetylase 6 [Zea mays]
Length = 700
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 190/384 (49%), Gaps = 42/384 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
++ + +D+ M H T G E+HPEN +R+++I L ++
Sbjct: 14 LVGLLYDERMCAHATPNG--------------EEHPENPERLRSIWRKLNAAGVASRCVA 59
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEA-----DKAGGKMV--CDGTVLNPGSWGAALLAVG 128
A+ + S H+ +I + E D + K+ + LN GS +A+LA G
Sbjct: 60 LKAKEAEDKYIASVHSKRHIKLMKEISSTIYDASRNKIARKFNSIYLNKGSSESAVLAAG 119
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V G A ALVRPPGHHA+ A G+C NN +A LN G K
Sbjct: 120 SVIEVAEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKK 179
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D DVH+GNGT + FY +VL S+H ++GS+ PS + + +GE G GYN+
Sbjct: 180 ILIVDWDVHHGNGTQKMFYDDPRVLFFSVHRFDYGSFYPSE-GDASHCFIGEEAGKGYNI 238
Query: 244 NIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P +G GD Y+ A +++P + F+P++I++ G D++ DP G C+T +GY
Sbjct: 239 NVPWEHGKCGDADYIAAWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYAL 298
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAY-YPED 361
+ + + L ++ GR+++ EGGY+ L + V LL D + PE
Sbjct: 299 L--LTKLLG--FAQGRIVMALEGGYN-------LRSIANSVCACAKVLLGDKFTFNTPEM 347
Query: 362 EAFPV--KVIESIKQYQNDVIPFL 383
+ F +VI++++ P L
Sbjct: 348 QPFESTWRVIQAVRNELKTCWPVL 371
>gi|392382244|ref|YP_005031441.1| putative deacetylase; histone deacetylase superfamily [Azospirillum
brasilense Sp245]
gi|356877209|emb|CCC98018.1| putative deacetylase; histone deacetylase superfamily [Azospirillum
brasilense Sp245]
Length = 309
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 155/329 (47%), Gaps = 27/329 (8%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+F L HDTG G HPE +RI + +L R + +
Sbjct: 5 IFTHPDFLAHDTGPG----------------HPERPERIAVVWEVLDRDEFRDLPRFEAP 48
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHV 137
A++ QL H P Y++ ++ A G D TVL+P S A L A G +A+ V
Sbjct: 49 -EAEVEQLRWVHDPAYVDAVLNAVPDSGHARLDADTVLSPTSRSAILRAAGAVCAAVDAV 107
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGN 196
LDG K A+ VRP GHHA+P A G+C NN + + A G +V V+D DVH+GN
Sbjct: 108 LDGTAKNAFCAVRPCGHHAEPARAMGFCVFNNVAVGAEHARKRRGLTRVAVVDYDVHHGN 167
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT F+ + S H + P +P G++ E G + +N PLP +G +
Sbjct: 168 GTQAMFWDDADLFFASTHQS-----PLYPGTGSMSETGVADNI---VNAPLPPHSGTVEF 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
AM ++PA+++F+P +I++ G D+ A DP T + R + ADR
Sbjct: 220 RQAMERRILPALEEFQPELILISAGFDAHARDPLASLNFTGPDFEWATRKLVEAADRLCD 279
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
GR++ V EGGY + A A L+ ++
Sbjct: 280 GRVVTVLEGGYDMVGLAEGCAAHLQALMR 308
>gi|6324307|ref|NP_014377.1| Hda1p [Saccharomyces cerevisiae S288c]
gi|1730711|sp|P53973.1|HDA1_YEAST RecName: Full=Histone deacetylase HDA1
gi|1301851|emb|CAA95883.1| HDA1 [Saccharomyces cerevisiae]
gi|151944501|gb|EDN62779.1| histone deacetylase [Saccharomyces cerevisiae YJM789]
gi|285814630|tpg|DAA10524.1| TPA: Hda1p [Saccharomyces cerevisiae S288c]
gi|349580905|dbj|GAA26064.1| K7_Hda1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296968|gb|EIW08069.1| Hda1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 706
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S IP A ++L
Sbjct: 75 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEV 134
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 135 HTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 194
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 195 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 254
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 255 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 313
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 314 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 369
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP++ P+ E + KVI +Y
Sbjct: 370 LCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLS-DPKPEVIEMIDKVIRLQSKYW 428
Query: 377 N 377
N
Sbjct: 429 N 429
>gi|207341624|gb|EDZ69626.1| YNL021Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 690
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S IP A ++L
Sbjct: 59 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEV 118
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 119 HTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 178
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 179 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 238
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 239 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 297
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 298 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 353
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP++ P+ E + KVI +Y
Sbjct: 354 LCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLS-DPKPEVIEMIDKVIRLQSKYW 412
Query: 377 N 377
N
Sbjct: 413 N 413
>gi|448434388|ref|ZP_21586198.1| histone deacetylase superfamily protein [Halorubrum tebenquichense
DSM 14210]
gi|445685304|gb|ELZ37659.1| histone deacetylase superfamily protein [Halorubrum tebenquichense
DSM 14210]
Length = 334
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 157/306 (51%), Gaps = 30/306 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGIPAQIP 84
L HDTG E+HPEN DR++ I +RG + + + PA+
Sbjct: 10 LEHDTG----------------ERHPENPDRLRAI----RRGLTKRHGVEYAEADPAEKV 49
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG-- 142
+ + H Y++EL GG TV + G+W AAL A G A + +DG
Sbjct: 50 AITAVHDAGYVDELESFVADGGGSWDPDTVASDGTWDAALTAAGLAQWAAREAIDGASGR 109
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEG 201
+ +A+ RPPGHHA A G+CF NNA +A Q L+ G +V + D DVH+GNGT +
Sbjct: 110 QTPFAIGRPPGHHAVTGDAMGFCFFNNAAVAAQTVLDEGLADRVAIFDWDVHHGNGTQDI 169
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY V S+H + +P G ++E GEGEG G N+PL G GD Y++A+
Sbjct: 170 FYDRGDVFYASIHED-----GLYPDTGALNETGEGEGEGTTANLPLAAGAGDADYLYAVD 224
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E V PA+ +F+P+++++ G D+ DP R ++ +GY + +R+LA +
Sbjct: 225 EAVAPAVDRFDPDLVLVSAGFDAHRHDPISRMRVSSEGYALLTDRIRTLASDVDAADAYV 284
Query: 322 VQEGGY 327
+ EGGY
Sbjct: 285 L-EGGY 289
>gi|433593271|ref|YP_007282757.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natrinema pellirubrum DSM 15624]
gi|448334832|ref|ZP_21523992.1| histone deacetylase superfamily protein [Natrinema pellirubrum DSM
15624]
gi|433308309|gb|AGB34119.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natrinema pellirubrum DSM 15624]
gi|445618636|gb|ELY72196.1| histone deacetylase superfamily protein [Natrinema pellirubrum DSM
15624]
Length = 339
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 151/284 (53%), Gaps = 16/284 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPY--ISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
+HPENSDR++ I R ++ Y + + PA ++L+ H DY+ E +GG
Sbjct: 17 RHPENSDRLRAI-----RRALTDYNDVKYVDAAPATRDRILAVHDEDYVAEFESFCASGG 71
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI--AYALVRPPGHHAQPTMADGY 164
TV +W A+L + G A K LD + ++L RPPGHHA A G+
Sbjct: 72 GNWDADTVAVESTWEASLASAGLAEWAAKTALDQRTEQFPPFSLGRPPGHHAVEDDAMGF 131
Query: 165 CFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
CF NN +A Q ++ G +V +ID DVH+GNGT E FY V +S H +
Sbjct: 132 CFFNNIAIAAQSVIDVGTAERVAIIDWDVHHGNGTQEIFYDDGSVFYVSFHED-----GL 186
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G V+E G G+G G LN+P P GT + GY+ A+ E+V P + F+P+++++ G D
Sbjct: 187 YPGTGFVEETGTGDGTGTTLNVPFPPGTTEHGYLTAIDEVVGPELLAFDPDLLLVSAGFD 246
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ DP R ++ DGY + + VR +A +G L V EGGY
Sbjct: 247 AHRHDPISRMSVSTDGYGLLTQQVRKIA-VSTGAGLGFVLEGGY 289
>gi|157114211|ref|XP_001657988.1| histone deacetylase [Aedes aegypti]
gi|108883594|gb|EAT47819.1| AAEL001069-PA [Aedes aegypti]
Length = 1059
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 167/323 (51%), Gaps = 15/323 (4%)
Query: 39 FDPGFLE---VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
+D LE V E HPE DR+ I + + + + A +L H+ ++
Sbjct: 467 YDESLLEHRNVHEDHPEQPDRVAKIYTRHEEYKLLARMKRLKPRHATTTELCMVHSRQHV 526
Query: 96 NELVEA-DKAGGKMVCD---GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRP 151
N + ++ K V D +P ++ A LA G+ L + VL+G + +VRP
Sbjct: 527 NVIRRTVEREEMKQVADQFNSVYFHPKTFECATLAAGSVLQVVDEVLNGQSRSGVCIVRP 586
Query: 152 PGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLT 210
PGHHA+ M G+C NN +A Q A+ + G +V+++D DVH+GNGT F +VL
Sbjct: 587 PGHHAESDMPHGFCIFNNVAIAAQYAIRDHGLKRVLIVDWDVHHGNGTQHIFESDPRVLY 646
Query: 211 ISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAI 268
IS+H ++G++ P + D +G G G G+N+NIP G GD+ Y A ++++P
Sbjct: 647 ISVHRYDNGTFFPK-STDANFDVVGSGSGEGFNVNIPWNKKGMGDQEYSAAFQQVILPVA 705
Query: 269 QKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH 328
+F+P ++++ G D++ DP G +T + Y + SLA+ GR+++ EGGY+
Sbjct: 706 YEFDPELVLVSAGFDAAIGDPLGGCKVTPEAYGFFTHWLSSLAN----GRIVVCLEGGYN 761
Query: 329 VTYSAYCLHATLEGVLNLPLALL 351
V ++ + + +L PL +L
Sbjct: 762 VNSISHAMALCTKSLLGDPLPML 784
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 177/357 (49%), Gaps = 30/357 (8%)
Query: 39 FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
+D G+ E E+ +R + + + + I P + A ++L+ HTP+ + E+
Sbjct: 48 WDEGYPECPERFTRVLERCRELGLVDRCKMIEPRM-------ATEEEILTKHTPEQV-EI 99
Query: 99 VEADKAGGKMV--------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
+ K + D ++P S+ +LLA G+T+ + V+ G + A++R
Sbjct: 100 LRGTKGSEDLERLEELSSHYDAVFVHPSSYDCSLLACGSTIELVDAVVGGRVQNGMAIIR 159
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA +GYCF NN +A Q AL+ G K++V+D D+H+G GT FY +VL
Sbjct: 160 PPGHHAMKAEYNGYCFFNNVAIAAQHALDRLGLKKILVVDWDIHHGQGTQRMFYDDPRVL 219
Query: 210 TISLHMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPA 267
S+H G + P+ + D +GEG G GYN N+PL G + Y+ ++++P
Sbjct: 220 YFSIHRYECGKFWPN-LRESDFDYVGEGAGLGYNFNVPLNRIGMANGDYLAIWQQILLPV 278
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+F+P ++++ G D++ P G+ +T Y + + SLA GR+ ++ EGGY
Sbjct: 279 AMEFQPELVLISAGYDAAYGCPEGQMEITPAFYPHLLTPLMSLAQ----GRVAVILEGGY 334
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
++ A TL +L P LL + + P E+ ++ I ++ PF K
Sbjct: 335 CLSSLAEGGALTLRTLLGDPCPLLVEKLQ--PPCESMQQTILNCIHTHR----PFWK 385
>gi|356511847|ref|XP_003524633.1| PREDICTED: histone deacetylase 5-like [Glycine max]
Length = 656
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 164/312 (52%), Gaps = 22/312 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL--------- 98
E HPE +RI+ I + L+ + A+ LL H+ +++N +
Sbjct: 36 EDHPETPNRIRAIWNKLQSTGVPQRCVILEAKEAEDKHLLLVHSENHVNLIKNISSKQFN 95
Query: 99 VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
K K+ D N GS AA LA G+ + ++ V A A+VRPPGHHA+
Sbjct: 96 SRRHKIASKL--DSIYFNEGSSEAAYLAAGSAVEVVERVASRELDSAVAIVRPPGHHAEQ 153
Query: 159 TMADGYCFLNNAGLAVQLALNS----GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+C NN +A + L+ G K++++D DVH+GNGT + F+ ++VL S+H
Sbjct: 154 NEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVH 213
Query: 215 MNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVHAMTELVVPAIQKFE 272
+ GS+ P++ +G +GEG G GYN+N+P NG GD Y +++P ++F
Sbjct: 214 RHEFGSFYPAN-DDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFN 272
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P++I++ G D++ DP G +T GY + + + A+ GR++++ EGGY++
Sbjct: 273 PDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLEKLMNFAE----GRIVLILEGGYNLDSI 328
Query: 333 AYCLHATLEGVL 344
A +HA LE +L
Sbjct: 329 AKSMHACLEVLL 340
>gi|116748380|ref|YP_845067.1| histone deacetylase superfamily protein [Syntrophobacter
fumaroxidans MPOB]
gi|116697444|gb|ABK16632.1| histone deacetylase superfamily [Syntrophobacter fumaroxidans MPOB]
Length = 316
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 156/312 (50%), Gaps = 21/312 (6%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
+DD +L H TG HPE+ +R++ + ++ + P ++
Sbjct: 7 LYDDRLLLHCTGS----------------NHPESPERLEAVYRGVEEAGLFPRLTLIKAS 50
Query: 80 PAQIPQLLSFHTPDYINELVEADKAG-GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
PA++ + + H+P +I EA G+ + S+ ALLAVG L A++ V+
Sbjct: 51 PAKLKWIEAVHSPKHIMRFEEACLLEMGEFDHPDNQMCRESYETALLAVGGLLEAVRMVM 110
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNG 197
+G A+ VRPPGHHA+ A G+C+ NN +A + LN G +V ++DID H+GNG
Sbjct: 111 EGIIDNAFCAVRPPGHHAEMNRALGFCYFNNVAIAARYLLNEWGVERVGIVDIDAHHGNG 170
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T F V S H H S+ + P G E G G G G+ LN PL G GD Y+
Sbjct: 171 TQHIFEDDPSVFYYSAH-EHPSF--AFPGTGREFETGVGAGSGFTLNCPLLPGQGDEEYM 227
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+ + PA +F+P +I++ G D+ D L+ +G+ + R + LAD YS G
Sbjct: 228 AILERDLAPAFAEFKPQVILVSAGFDAHVGDDMSDLKLSTEGFSRIMRKLVELADAYSAG 287
Query: 318 RLLIVQEGGYHV 329
R++ V EGGY V
Sbjct: 288 RIISVLEGGYSV 299
>gi|116328827|ref|YP_798547.1| histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331736|ref|YP_801454.1| histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116121571|gb|ABJ79614.1| Histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116125425|gb|ABJ76696.1| Histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 317
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 146/283 (51%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H ENSDR+ ++ L + S + +P++ H+ ++ ++ + G
Sbjct: 22 HYENSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEF--FNEIHSSAHLQKIERSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW AA A + ++ ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWIAAYSAANSGITLADALISGTIKNGFSLLRPPGHHAEHNRIMGFCML 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 139 NNVAITARYLQKNGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ EG G NIP+ + ++ Y+ E+V+P ++ FEP+++++ G D+
Sbjct: 194 GLSSETGKNEGSGTTKNIPMQANSDNQAYIQKFKEVVIPTMEHFEPDIVLISAGFDAHKE 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV AD+ G++L EGGY++T
Sbjct: 254 DPLGEMDITTKGFEDLTKIVLESADKICEGKVLSFLEGGYNLT 296
>gi|401837792|gb|EJT41666.1| HDA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 706
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 182/357 (50%), Gaps = 36/357 (10%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S I A ++L
Sbjct: 75 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDIGDLMLKIPVRAATSEEILEV 134
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 135 HTKEHLEFIESTEKMSREQLLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 194
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 195 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 254
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 255 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 313
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ ++ Y M +++SLA G
Sbjct: 314 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVSPSCYGHMTHMLKSLA----RGN 369
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV-KVIESIKQ 374
L +V EGGY+ L A L++ L+ +P P+ + P +VIE I +
Sbjct: 370 LCVVLEGGYN-------LDAIARSALSVAKVLIGEPPDELPDSLSDPKPEVIEMIDK 419
>gi|448388089|ref|ZP_21565029.1| histone deacetylase [Haloterrigena salina JCM 13891]
gi|445670740|gb|ELZ23337.1| histone deacetylase [Haloterrigena salina JCM 13891]
Length = 342
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I LK+ Y+ P + +L + H +Y+ +
Sbjct: 13 DPG-----SRHPESPDRLRAIRERLKKKHGVEYVE---ADPCDLDRLAAVHEREYLESVR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E GG T +W A + G A++ L+G + +++ RPPGHHA
Sbjct: 65 EFCADGGGNWDPDTSAVEETWDAVCQSAGLACWAVEAALEGATGRRTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NN +A Q AL+S +V ++D DVH+GNGT + FY + V +SLH
Sbjct: 125 YDDAMGFCFVNNVAVAAQHALDSEEYDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSLH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G VDE GEG G G +NIP+P GT DR Y+ A+ + A+ ++P+
Sbjct: 185 EQ-----GLYPGTGAVDETGEGAGEGTTMNIPMPAGTDDREYLEAVEGPIGHALTDYDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y M R+LAD I+ EGGY +
Sbjct: 240 LLLISAGFDAHRHDPISRIRLSTEAYALMTDRFRTLADETDAAFAFIL-EGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVAIVHETFDG 309
>gi|359728013|ref|ZP_09266709.1| histone deacetylase [Leptospira weilii str. 2006001855]
Length = 315
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 145/283 (51%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM- 108
H E+SDR+ +V I K S + S ++P FH L + +++ GK
Sbjct: 24 HYESSDRL--LVCINKLRQTSYFNSLFFPEMKKVPSEF-FHEIHSSTHLQKIERSKGKRG 80
Query: 109 -VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T SW AA A + ++ +L G K ++L+RPPGHHA+ G+C L
Sbjct: 81 YFDSDTPFTEKSWIAAYSAANSGITLADALLSGTIKNGFSLLRPPGHHAEHNRIMGFCML 140
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 141 NNVAITARYLQKNGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYPMT 195
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ EG G NIP+ + + Y+ E+V+P ++ F P+++++ G D+
Sbjct: 196 GLSSETGKNEGIGTTKNIPMQANSDSQAYIQKFKEVVIPTMEHFGPDVVLISAGFDAHKE 255
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV AD+ GG++L EGGY++T
Sbjct: 256 DPLGGMNITTKGFEDLTKIVLESADKICGGKVLSFLEGGYNLT 298
>gi|71083166|ref|YP_265885.1| histone deacetylase family protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062279|gb|AAZ21282.1| histone deacetylase family protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 309
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 151/307 (49%), Gaps = 28/307 (9%)
Query: 23 DGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQ 82
D NH+TG G HPE DR+ ++ K+ I W
Sbjct: 9 DTYQNHNTGDG----------------HPEKIDRVTVVIDNFKKLDNKNLI-WKKPSKFN 51
Query: 83 IPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
L H DYIN + ++ G DG T+++PGS A L AVG+ ++A+ V +
Sbjct: 52 RSLLEITHNSDYINFVEKSFPEKGLSFLDGDTIVSPGSKDATLDAVGSIITAIDGVQNKD 111
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
K A+ VRPPGHHA+ A G+C NN + +N K+ +ID DVH+GNGT +
Sbjct: 112 FKNAFCAVRPPGHHAEKNKAMGFCIYNNVAVGANYLINKYKLKKIAIIDFDVHHGNGTQD 171
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
FY + KVL IS H P +P +GT DE G+ LNIPLP GT Y++A
Sbjct: 172 IFYDNEKVLYISTHQ-----YPYYPGSGTNDEKGKHNNI---LNIPLPAGTTSEEYLNAY 223
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
E V+ I++F+P I+L G D+ DP + L + + + L+ +Y G+++
Sbjct: 224 -EFVLNKIKEFKPEFILLSAGFDAHKDDPLAQLQLESKDFYNITKRTLELSKQYCDGKVV 282
Query: 321 IVQEGGY 327
+ EGGY
Sbjct: 283 SILEGGY 289
>gi|195631570|gb|ACG36680.1| histone deacetylase 10 [Zea mays]
Length = 430
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 35/351 (9%)
Query: 48 EKHPENSDRIKNIVSILKRGPISP------YISWHSGIPAQIPQLLSFHTPDYINELVEA 101
E HPE++ R+ IV L++ +SP + + PA + + H+ YI L
Sbjct: 85 EAHPESNKRVPVIVDTLEKLELSPKHRGSQVLEIQNFNPASLDDVARVHSRSYITGL--- 141
Query: 102 DKAGGKMVCDGTVLNPG----------------SWGAALLAVGTTLSAMKHVLDGHGKIA 145
+KA G+ +G +L G S GA + V + ++A K L + +
Sbjct: 142 EKAMGRASDEGLILIEGTGPTYATETTFRESLLSAGAGITLVDSVVAASK--LGPNPPLG 199
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYR 204
+AL+RPPGHHA P G+C N +A + A + G +V++ID DVH+GNGT++ FY
Sbjct: 200 FALIRPPGHHAVPQGPMGFCVFGNIAVAARYAQHQHGLKRVMIIDFDVHHGNGTSDSFYD 259
Query: 205 SNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
+ +S H G S+P G ++E+G+G+G G LN+PLP G GD A E++
Sbjct: 260 DPDIFFLSTHQ----LG-SYPGTGKINEVGQGDGEGTTLNLPLPGGAGDYAMRCAFDEVI 314
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
P+ +F+P++I++ G D+ A DP T + + ++ + GGR + E
Sbjct: 315 APSAHRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLASSIKQVTKELCGGRCVFFLE 374
Query: 325 GGYHVTYSAYCLHATLEGVLNLP--LALLSDPIAYYPEDEAFPVKVIESIK 373
GGY++ + + T L+ P A DP + E + IE K
Sbjct: 375 GGYNLQSLSSSVADTFRAFLDEPSLAAQFDDPAILFEEPTRKIKEAIEKAK 425
>gi|225579787|gb|ACN94067.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 170/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N EL E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGRELKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 133 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 192
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 193 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 252
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 253 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 312
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 313 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 370
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 371 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 419
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 420 DSLAEGAALTLRSLLGDPC 438
>gi|284163711|ref|YP_003401990.1| histone deacetylase [Haloterrigena turkmenica DSM 5511]
gi|284013366|gb|ADB59317.1| Histone deacetylase [Haloterrigena turkmenica DSM 5511]
Length = 340
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 156/309 (50%), Gaps = 20/309 (6%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I LK+ Y+ P + +L + H +Y+ +
Sbjct: 13 DPG-----SRHPESPDRLRAIRERLKKKHGVEYVE---ADPCDLDRLAAVHEREYLESVR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E GG T +W A + G A++ L+G + +++ RPPGHHA
Sbjct: 65 EFCADGGGNWDPDTSAVEETWDAVCQSAGLACWAVEAALEGATGRRTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+CF+NN +A Q AL++ +V ++D DVH+GNGT + FY + V +S+H
Sbjct: 125 YDDAMGFCFVNNVAVAAQYALDAYDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSIHEQ 184
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
+P G VDE GEG G G +NIP+P GT DR Y+ A+ + A+ ++P+++
Sbjct: 185 -----GLYPGTGAVDETGEGAGEGTTMNIPMPAGTDDREYLAAVEGPISHALTDYDPDLL 239
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SA 333
++ G D+ DP R L+ + Y M R+LAD I+ EGGY + S
Sbjct: 240 LISAGFDAHRHDPISRIRLSTEAYALMTDRFRTLADETDAAFAFIL-EGGYGLDVLADSV 298
Query: 334 YCLHATLEG 342
+H T +G
Sbjct: 299 AIVHETFDG 307
>gi|254775778|ref|ZP_05217294.1| histone deacetylase superfamily protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 309
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 138/281 (49%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVAAALSR-PGFDALVRETAEPAELAATRYVHSNRYVDALEAARPQHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLQAVDRVLAGDVQNAFVACRPPGHHAETERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A T+ +VPA+Q F P +I++ G D+
Sbjct: 194 TGAAAETGVGNIF----NSPLAPGDGGAELRAAFTDRIVPALQAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A++ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFGWVTRELMKSAEKLCDGRLVAVLEGGY 290
>gi|225579783|gb|ACN94063.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 170/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N EL E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGRELKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|149175826|ref|ZP_01854444.1| acetoin utilization protein [Planctomyces maris DSM 8797]
gi|148845273|gb|EDL59618.1| acetoin utilization protein [Planctomyces maris DSM 8797]
Length = 310
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 149/310 (48%), Gaps = 23/310 (7%)
Query: 20 FWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
F + L H+TG HPE+S R++ +++ + I +
Sbjct: 5 FQSNKFLRHETGA-----------------HPESSLRLETVMNQVSTAAIPNLMILKDPT 47
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
+LL H Y+N+L AGG + TV++ S+ A A G + A+ V+
Sbjct: 48 VGAGEELLRVHPETYLNQLQAFSAAGGGRIESDTVMSADSYEVARYAAGCAVEAVDRVIM 107
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGT 198
G K ++ RPPGHHA A G+C LNN +A + A++ G +V+++D DVH+GNGT
Sbjct: 108 GQVKQVFSASRPPGHHALSDRAMGFCLLNNVAIAARHAIDFHGLNRVLIVDWDVHHGNGT 167
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY V S H + P +P G E G G G G N+PL G + Y
Sbjct: 168 QDIFYEEESVYFFSAHRH-----PFYPGTGLGHETGSGAGLGTIWNLPLAFGISRQDYFS 222
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
++V A + +P +I++ G D+ DP G L + + + ++V+ +A Y GGR
Sbjct: 223 QFERMLVDAAARCQPELILISAGFDAHKDDPIGSLGLETEDFGRLTQLVKEVAREYCGGR 282
Query: 319 LLIVQEGGYH 328
++ + EGGYH
Sbjct: 283 IVSLLEGGYH 292
>gi|448543520|ref|ZP_21625074.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-646]
gi|448550612|ref|ZP_21628915.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-645]
gi|448559158|ref|ZP_21633410.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-644]
gi|445706243|gb|ELZ58126.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-646]
gi|445711117|gb|ELZ62911.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-645]
gi|445711528|gb|ELZ63319.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-644]
Length = 337
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 161/327 (49%), Gaps = 31/327 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L+HDTG +HPE +DR++ I L + Y+ PA+
Sbjct: 10 LDHDTGP----------------RHPETADRLRAIRRGLAKRHGVEYVD---ASPAEKST 50
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--K 143
+ + H Y++E E GG TV SW AAL + G A + LDG
Sbjct: 51 VAAVHDDGYVDEFHEFCLDGGGNWDPDTVAVEASWDAALTSAGLAEWAARTALDGDDGRD 110
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGF 202
++L RPPGHHA A G+CF NNA +A Q ++ G +V + D DVH+GNGT + F
Sbjct: 111 TPFSLGRPPGHHAVEDDAMGFCFFNNAAVAAQAVIDDGLAERVAIFDWDVHHGNGTQDIF 170
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTE 262
Y V S+H + +P G VDE GEG+G G LN+PL G GD YV++ E
Sbjct: 171 YDRGDVFYTSIHED-----GLYPGTGEVDETGEGDGEGTTLNVPLHAGAGDADYVYSFDE 225
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
+ PA+++F+P++ ++ G D+ DP R ++ +GY + V+ L + + + V
Sbjct: 226 AIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAMLTECVQELCEE-TDTAIAFV 284
Query: 323 QEGGY---HVTYSAYCLHATLEGVLNL 346
EGGY ++ +H T +G + +
Sbjct: 285 LEGGYGLDTLSEGVATVHETFDGRIAM 311
>gi|410082597|ref|XP_003958877.1| hypothetical protein KAFR_0H03320 [Kazachstania africana CBS 2517]
gi|372465466|emb|CCF59742.1| hypothetical protein KAFR_0H03320 [Kazachstania africana CBS 2517]
Length = 702
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 192/362 (53%), Gaps = 37/362 (10%)
Query: 42 GFLEVLEKHPENSDRIKNIVSIL-KRGPISPYISWHSG------IPAQIP-------QLL 87
+ E ++ HPE+ RI I IL + G I+ + SG I +IP ++L
Sbjct: 67 SYFEYIDPHPEDPRRIYRIYKILAENGLINDTML--SGVDDIGDIMLKIPVREATADEIL 124
Query: 88 SFHTPDYINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
H+ +++ E +E+ + V D N S+ +A L+ G + A K V++G
Sbjct: 125 EVHSREHL-EFLESTTTMNREVLLKETEKGDSVYFNNDSYMSAKLSCGGAIEACKAVVEG 183
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNG 197
K A A+VRPPGHH++P + G+C +N +A + L + K++++D D+H+GNG
Sbjct: 184 KVKNALAVVRPPGHHSEPESSGGFCLFSNVAVAAKNILKNYPESVRKIMILDWDIHHGNG 243
Query: 198 TAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRG 255
T + FY+ +VL +SLH G + P Q G D+ GEG+G G+N NI P G GD
Sbjct: 244 TQKAFYQDERVLYVSLHRFEAGKYYPGTVQ-GQYDQCGEGKGEGFNCNITWPTGGVGDAE 302
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y+ A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA
Sbjct: 303 YMWAFEQIVMPMGREFQPDLVIISSGFDAADGDVIGQCHVTPSCYGHMTHMLKSLA---- 358
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIK 373
G L++V EGGY++ A + + ++ P L DP+ P+ EA + KVI+
Sbjct: 359 RGNLVVVLEGGYNLDSIAISALSVAKTLIGEPPDELPDPLK-DPKPEALEMIYKVIKIQS 417
Query: 374 QY 375
+Y
Sbjct: 418 KY 419
>gi|225579786|gb|ACN94066.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 170/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N EL E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGRELKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDPC 435
>gi|302038518|ref|YP_003798840.1| putative deacetylase, histone deacetylase family [Candidatus
Nitrospira defluvii]
gi|300606582|emb|CBK42915.1| putative Deacetylase, histone deacetylase family [Candidatus
Nitrospira defluvii]
Length = 314
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 37 TGF--DPGFLE--VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTP 92
TGF DP +LE + HPE+ +R++ I+ L++ ++ A+ + H P
Sbjct: 4 TGFIYDPRYLEHDMGAGHPESPNRLRAIMQRLEQSGTLASLTRIDPRTAEDEWITLVHQP 63
Query: 93 DYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRP 151
+Y+ L G++ D T ++PGS AA LA G L+ + ++ G + A+ VRP
Sbjct: 64 EYVAMLNRQAPTHGRISLDADTSMSPGSLRAAYLAAGGALAGVDAIMTGRVQHAFCAVRP 123
Query: 152 PGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLT 210
PGHHA+ A G+C NN +A + A G +V+++D DVH+GNGT F VL
Sbjct: 124 PGHHAEADRAMGFCLFNNVAIAARYAQKRYGVQRVLIVDWDVHHGNGTQHSFESDPSVLF 183
Query: 211 ISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQK 270
S H P +P G E G G G G +N+P+ G GD Y ++++PA
Sbjct: 184 FSTHQY-----PHYPGTGRAGECGRGAGEGLTINVPMEAGEGDDEYRAVFQKVLLPAADA 238
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
F+P +++ G D+ DP LT DGY ++ IV +A ++ GRLL EGGY++T
Sbjct: 239 FKPEFVIISAGFDAHRDDPLASMGLTEDGYADLTNIVAGIARQHCQGRLLSSLEGGYNLT 298
Query: 331 YSAYCLHATLEGVL 344
A + L+ ++
Sbjct: 299 ALAASVERHLQALV 312
>gi|328953923|ref|YP_004371257.1| histone deacetylase superfamily protein [Desulfobacca acetoxidans
DSM 11109]
gi|328454247|gb|AEB10076.1| histone deacetylase superfamily [Desulfobacca acetoxidans DSM
11109]
Length = 316
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 142/291 (48%), Gaps = 7/291 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
KHPE DR++ I + + I A + + H YI A + G
Sbjct: 20 KHPERPDRLRAIHRRVVFSGLIKQIRLIEPYEASLAWIERLHDHRYIERFRTACQQGQPF 79
Query: 109 VCDGTV--LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ D T + S+ A LAVG +A ++ G A+ VRP GHHA+ A G+CF
Sbjct: 80 L-DETENGICRESFNIARLAVGGVFAACDAMMHGAVNNAFCAVRPAGHHAERAQARGFCF 138
Query: 167 LNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
NN L + L G ++ ++D D H+GNGT VL ISLH S G +P
Sbjct: 139 FNNVALGAKYLQEKYGLARIAIVDWDAHHGNGTQHLLEEDPTVLFISLH---ESPGTCYP 195
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G E G+GEGFGY LN P P + D Y+ M E V+PA+++F P+ +++ G D
Sbjct: 196 GTGWESERGKGEGFGYTLNFPFPAYSRDPDYLEVMDEEVLPALEEFRPDCLMISAGFDGH 255
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
A DP R L+ Y MG ++ + A + GR++ V EGGY++ C+
Sbjct: 256 ARDPMSRLRLSDKAYMIMGALLLTFARDFCQGRIISVLEGGYNLEVLEDCV 306
>gi|321474949|gb|EFX85913.1| hypothetical protein DAPPUDRAFT_98501 [Daphnia pulex]
Length = 721
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 44/350 (12%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPG---FLEVLEKHPENSDRIKNIVSILKRG-PISPYIS 74
V +D M +H K L+D ++ F+ VL++ E + +L+R P+ P
Sbjct: 5 VVYDQRMADH---KCLWDLKYNEKPERFINVLKRCEE--------LKLLQRCLPLKPR-- 51
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAV 127
A +LL HTPD I+ L + D + D ++P ++ +LLA
Sbjct: 52 -----EATEEELLKLHTPDMISILKDTDSISDEEALEKLSSKYDFLYIHPSTYQLSLLAA 106
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVV 186
G+T+ + ++LDG + A++RPPGHHA + GYCF NN +A Q AL N G +++
Sbjct: 107 GSTVELVSNILDGKIRNGMAIIRPPGHHAMKSEYCGYCFYNNVAIATQHALDNRGLKRIL 166
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNI 245
++D D+H+G T + FY +VL S+H +G++ P H + +G G G GYN+N+
Sbjct: 167 IVDWDIHHGQATQQMFYDDPRVLYFSIHGFQNGAFWP-HLRESDYHNIGRGAGLGYNINV 225
Query: 246 PLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMG 304
P+ G+ Y+ +L++P +F P +I++ G D++ P G +T Y
Sbjct: 226 PMNEVKMGNSDYMAIFHQLLLPIAYEFNPELIIVSAGYDAALGCPEGEMEITPACYSHFT 285
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
+ LA+ GRL +V EGG YCL + EG LL DP
Sbjct: 286 NSLMGLAN----GRLAVVLEGG-------YCLKSLSEGAALTLRTLLGDP 324
>gi|118464825|ref|YP_882515.1| histone deacetylase [Mycobacterium avium 104]
gi|118166112|gb|ABK67009.1| histone deacetylase superfamily protein [Mycobacterium avium 104]
Length = 309
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 138/281 (49%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVAAALSR-PGFDALVRETAEPAELATTRYVHSNRYVDALEAARPQHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLQAVDRVLAGDVQNAFVACRPPGHHAETERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A T+ +VPA+Q F P +I++ G D+
Sbjct: 194 TGAAAETGVGNIF----NSPLAPGDGGPELRAAFTDRIVPALQAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A++ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFGWVTRELMKSAEKLCDGRLVAVLEGGY 290
>gi|400536512|ref|ZP_10800046.1| histone deacetylase superfamily protein [Mycobacterium colombiense
CECT 3035]
gi|400329525|gb|EJO87024.1| histone deacetylase superfamily protein [Mycobacterium colombiense
CECT 3035]
Length = 309
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 137/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + PA + H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVEAALSR-PQFDALVREEAEPADLAATRYVHSNRYVDALEAARPDDGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AAL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWEAALRGVGATLQAVDRVLAGDAQNAFVACRPPGHHAETERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYTDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G V E G G F N PL G G A + +VPA+Q F P +I++ G D+
Sbjct: 194 TGAVRETGVGNIF----NAPLAPGDGGAELRAAFQDRIVPALQAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T + + R + + A++ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTAADFAWVTRELMAAAEKLCDGRLVAVLEGGY 290
>gi|194763445|ref|XP_001963843.1| GF21044 [Drosophila ananassae]
gi|190618768|gb|EDV34292.1| GF21044 [Drosophila ananassae]
Length = 1142
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 18/310 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV--------EA 101
HPE RI++I + K + + S A ++ HT ++N + E
Sbjct: 564 HPEQPFRIQSIHQMHKEYALLERMKQLSARAATTDEICLAHTRSHVNSVRRLLGRDPEEL 623
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
+ G + L+P ++ A LA G+ L A+ VL G + VRPPGHHA+P
Sbjct: 624 HQLGSTY--NSVYLHPRTFDCATLAAGSVLQAVDSVLRGESRSGICNVRPPGHHAEPDQP 681
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL +S+H HG+
Sbjct: 682 HGFCIFNNVAIAAQYAIRDYGLQRVLIVDWDVHHGNGTQHIFESNPKVLYVSVHRYEHGA 741
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A ++++P +F P ++++
Sbjct: 742 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQVIMPIAYEFNPQLVLV 800
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GG++++ EGGY+V +Y +
Sbjct: 801 SAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALA----GGKIVVCLEGGYNVNSISYAMTM 856
Query: 339 TLEGVLNLPL 348
+ +L P+
Sbjct: 857 CTKTLLGDPV 866
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 28/333 (8%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL-----VEAD 102
++H E +R ++ + ++ A ++L HT ++ + L + D
Sbjct: 128 KEHYECPERFTRVLERCRELNLADRCLQLPSRAATKAEVLRLHTEEHFDRLKATSGIRDD 187
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
++ D ++P ++ +LLA G+T+ + ++ G + A++RPPGHHA
Sbjct: 188 DRMEELSSRYDSIYIHPSTFELSLLATGSTIELVDQLIAGSAQNGMAIIRPPGHHAMKAE 247
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFY----RSNKVLTISLH- 214
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY + N VL S+H
Sbjct: 248 FNGYCFFNNVALAAQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRQVNTVLYFSIHR 307
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFE 272
+GS+ P H +G G G GY N+PL N TG + Y+ +L++P +F+
Sbjct: 308 FEYGSFWP-HLHESDYHAIGSGPGTGYTFNVPL-NSTGMTNGDYLAIFQQLLLPVALEFQ 365
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P +I++ G D++ P G +T Y + + LAD ++ +V EGG
Sbjct: 366 PELIMVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----SKVAVVLEGG------ 415
Query: 333 AYCLHATLEGVLNLPLALLSDPIAYYPEDEAFP 365
YCL + EG +LL DP E+ A P
Sbjct: 416 -YCLDSLAEGAALTLRSLLGDPCPPLVEELALP 447
>gi|418720583|ref|ZP_13279780.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
gi|421094501|ref|ZP_15555217.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|410362563|gb|EKP13600.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|410742989|gb|EKQ91733.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
gi|456891461|gb|EMG02172.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200701203]
Length = 313
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 146/283 (51%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H E+SDR+ ++ L + S + +P++ H+ ++ ++ + G
Sbjct: 22 HYESSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEF--FNEIHSSAHLQKIERSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW AA A + ++ ++ G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWIAAYSAANSGITLADALISGTIKNGFSLLRPPGHHAEHNRIMGFCML 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 139 NNVAITARYLQKNGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ EG G NIP+ + ++ Y+ E+V+P ++ FEP+++++ G D+
Sbjct: 194 GLSSETGKNEGIGTTKNIPMQANSDNQAYIQKFKEVVIPTMEHFEPDIVLISAGFDAHKE 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV AD+ G++L EGGY++T
Sbjct: 254 DPLGEMDITTKGFEDLTKIVLESADKICEGKVLSFLEGGYNLT 296
>gi|410721921|ref|ZP_11361243.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanobacterium sp. Maddingley MBC34]
gi|410598039|gb|EKQ52631.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanobacterium sp. Maddingley MBC34]
Length = 342
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 146/279 (52%), Gaps = 10/279 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPEN +R++ +++ L R H PA LL HT Y+ L ++GG +
Sbjct: 18 HPENQERLEVMMNHLLREGEVEKSDIHQPTPASDDDLLRVHTTPYLKHLKNFAESGGGYL 77
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T +P S+ A LA G ++A + V D H AY++ RPPGHHA A G+C +NN
Sbjct: 78 DFDTFASPQSYEIAKLAAGGAITASRLVFD-HDDFAYSMARPPGHHATTDSAMGFCLINN 136
Query: 170 AGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ + K +++D D HYGNGTAE FY+ VL IS+H + + P G
Sbjct: 137 LAVALEYMREKHSLRKFLILDFDAHYGNGTAEIFYQDPHVLYISIHQDPHTIFPG---KG 193
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
++E G G+G G NLNIP+ G+ Y++ + +++ P ++KF+ + L VG D D
Sbjct: 194 FIEETGSGKGKGCNLNIPMSPGSATSDYIYILEKIIEPVLRKFKADFYFLDVGFDGHRED 253
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
P L D Y + ++ L +++++ EGGY
Sbjct: 254 PLSSLQLDDDFYPWIACYMQKLT-----PKMVLILEGGY 287
>gi|83719797|ref|YP_442634.1| histone deacetylase family protein [Burkholderia thailandensis
E264]
gi|83653622|gb|ABC37685.1| histone deacetylase family protein [Burkholderia thailandensis
E264]
Length = 340
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A LL H Y+ A GG +
Sbjct: 9 YAESPDSKRRLLSLVYASGLAARLDMSSAPAATDDDLLRIHPAHYLEAFKRASDTGGGDL 68
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 69 GELAPFGRGSYEIAALSAGLALAAVDAVLAERAANAFSLSRPPGHHCLRDKPMGFCLLAN 128
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + + P +
Sbjct: 129 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQAIYYDDADTLTISLHQDR-CFPPGY---S 184
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++V+ G D++A D
Sbjct: 185 GADERGAGAGIGANINVPLLAGAGDDAYRYAFERIVLPALDAFRPELVVVASGLDANAVD 244
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
P R L D YR M +++ A R+ GRL++V EGGY Y +C A +E +
Sbjct: 245 PLARMQLHSDSYRFMTHALKAAAQRHCAGRLVVVHEGGYSEAYVPFCGQAIVEAL 299
>gi|297797057|ref|XP_002866413.1| hypothetical protein ARALYDRAFT_919346 [Arabidopsis lyrata subsp.
lyrata]
gi|297312248|gb|EFH42672.1| hypothetical protein ARALYDRAFT_919346 [Arabidopsis lyrata subsp.
lyrata]
Length = 793
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 176/371 (47%), Gaps = 65/371 (17%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G D E DRI+ I L+ ++
Sbjct: 27 VGLVYDETMCKHDTPNGEVDV--------------ECPDRIRFIWEKLQLAGVTQRCVVL 72
Query: 77 SGIPAQIPQLLSFHTPDYIN-----ELVEADKAGGKM--VCDGTVLNPGSWGAALLAVGT 129
G A+ L HT ++N + D ++ V D LN GS AA LA G+
Sbjct: 73 GGSKAEDKHLKLVHTKKHVNFVKSISTKQKDSRRNRIASVLDSIYLNGGSSEAAYLAAGS 132
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS--------- 180
++ + V +G +A+VRPPGHHA+ A G+C NN +A LN
Sbjct: 133 VVNVAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASYLLNERSHSFGVFV 192
Query: 181 -------------GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM------------ 215
G K++++D D+H+GNGT + F++ +VL S+H
Sbjct: 193 LMFVCFLQMQPDLGVKKILIVDWDIHHGNGTQKMFWKDPRVLIFSVHRFKVAGNAYVARY 252
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPN 274
+HGS+ P+ +G + +GEG G G+N+N+P G GD Y+ A +++P ++F P+
Sbjct: 253 DHGSFYPA-SDDGDYNMVGEGPGKGFNINVPWEQGGCGDADYLAAWDHILIPVTKEFNPD 311
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV----T 330
+I+L G D++ DP G C+T DGY M ++ L + ++ G++++ EGGY++
Sbjct: 312 IILLSAGFDAAIGDPLGGCCITPDGYSVM---LKKLME-FAQGKIVLALEGGYNLESLAK 367
Query: 331 YSAYCLHATLE 341
S C+ LE
Sbjct: 368 SSLACVQVLLE 378
>gi|167619682|ref|ZP_02388313.1| histone deacetylase family, putative [Burkholderia thailandensis
Bt4]
gi|257138846|ref|ZP_05587108.1| histone deacetylase family protein putative [Burkholderia
thailandensis E264]
Length = 369
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 147/295 (49%), Gaps = 5/295 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A LL H Y+ A GG +
Sbjct: 38 YAESPDSKRRLLSLVYASGLAARLDMSSAPAATDDDLLRIHPAHYLEAFKRASDTGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERAANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQAIYYDDADTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++V+ G D++A D
Sbjct: 214 GADERGAGAGIGANINVPLLAGAGDDAYRYAFERIVLPALDAFRPELVVVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
P R L D YR M +++ A R+ GRL++V EGGY Y +C A +E +
Sbjct: 274 PLARMQLHSDSYRFMTHALKAAAQRHCAGRLVVVHEGGYSEAYVPFCGQAIVEAL 328
>gi|57234929|ref|YP_181077.1| histone deacetylase [Dehalococcoides ethenogenes 195]
gi|57225377|gb|AAW40434.1| histone deacetylase family protein [Dehalococcoides ethenogenes
195]
Length = 341
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 159/348 (45%), Gaps = 29/348 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + ++ LNH+TG H EN DR+ I+ + + +
Sbjct: 3 VGLVYNHIYLNHETGT-----------------HVENPDRLLAIMEYINTHGLKDRLVHV 45
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
+ +L FHT YI+ + E +GG + TV++ S+ AL AVG L +
Sbjct: 46 EPKRVGLGELEGFHTRKYISRVEEVGFSGGGWLDQDTVISVDSYETALYAVGGVLEGVDK 105
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYG 195
VL G + A+ + RPPGHHA P + G+C NN L ALN +V V+D DVH+G
Sbjct: 106 VLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVDFDVHHG 165
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NG +V IS H H P G E G F LNIPLP G GD
Sbjct: 166 NGIQHVCLNDPRVTYISTHQIH-----HFPFTGDSCEDGP---FQNILNIPLPAGCGDSH 217
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y +L+ P ++K P +I++ G D+ D G CL+ G+ + R ++ AD
Sbjct: 218 YQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKKTADEVC 277
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEA 363
GG+++ EGGYH A + A+L +L+ L P PE+ A
Sbjct: 278 GGKMVFSLEGGYHYLGLAESVGASLAVLLD---EALPPPNTKAPEETA 322
>gi|333984291|ref|YP_004513501.1| histone deacetylase superfamily protein [Methylomonas methanica
MC09]
gi|333808332|gb|AEG01002.1| histone deacetylase superfamily [Methylomonas methanica MC09]
Length = 309
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 148/308 (48%), Gaps = 28/308 (9%)
Query: 25 MLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIP 84
L HDTG G HPE+ R+ I + LK + +P I
Sbjct: 11 FLAHDTGPG----------------HPESPARLLAIETALKAAKFQSIRHVSAPLPDDIE 54
Query: 85 QLLSF-HTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
L+ HTP I ++ G D TV +PGS AAL AVG A+ +
Sbjct: 55 TKLALIHTPAMIARVLTGIPTEGLSHFDADTVASPGSKSAALRAVGAVCDAVDTLCTDRA 114
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A+ VRPPGHHA P G+C NN +A + A + G ++ ++D DVH+GNGT
Sbjct: 115 QQAFCAVRPPGHHAMPGYPMGFCLFNNIAIAAEYARSQYGLERIAIVDFDVHHGNGTQAA 174
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY +VL S H W P +P +G E G G +N+PLP GT + + T
Sbjct: 175 FYSQPQVLYASSHQ----W-PHYPGSGHPSE----NGVGNIINVPLPTGTDGKTFRAKYT 225
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
++++PA++KF P ++++ G D+ DP L D Y + R +R +AD GR++
Sbjct: 226 DIILPAVRKFNPQLLLISAGFDAHKDDPLASLRLVEDDYAWVTRQLRDIADATCNGRIIS 285
Query: 322 VQEGGYHV 329
EGGY++
Sbjct: 286 ALEGGYNI 293
>gi|393244978|gb|EJD52489.1| hypothetical protein AURDEDRAFT_82103 [Auricularia delicata
TFB-10046 SS5]
Length = 684
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 158/297 (53%), Gaps = 19/297 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISP--YISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
+PE +RI I +L+ G I P + H G A ++L H+ D + +
Sbjct: 56 NPEIPERILKIHDMLREGGILPRRMVQIH-GRLATRSEVLLVHSEDLWDRVDAIQHMDTD 114
Query: 108 MVCDGTV--------LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
M+ + ++ + ALL+ G T+ A V G + A+A+VRPPGHHA+P
Sbjct: 115 MIMNSITYYDHLSLYVSEATTKCALLSCGGTIEAALAVATGRVRNAFAIVRPPGHHAEPE 174
Query: 160 MADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NH 217
G+CF NN +A ++ + C +++++D DVH+GNGT F+ VL ISLH +
Sbjct: 175 EHMGFCFFNNVAVATRVVQEETNCKRILILDWDVHHGNGTQRAFWDDPSVLYISLHRYDG 234
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMI 276
G + PS P G+++ +GEG G GY +NIP P G GD Y++A +LV+P +F P+M+
Sbjct: 235 GKFYPSGP-FGSMEMVGEGPGRGYCVNIPWPEAGMGDAEYLYAFQQLVMPIAYEFAPDMV 293
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
++ G D++ DP G ++ GY M ++ LA GG+L + EGGY A
Sbjct: 294 MISAGFDAADGDPLGGCLVSPAGYAHMTHMLSGLA----GGKLCVALEGGYETKVIA 346
>gi|162458619|ref|NP_001105019.1| probable histone deacetylase 19 [Zea mays]
gi|32968028|gb|AAP92528.1|AF322918_1 HDA1 [Zea mays]
Length = 701
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 180/352 (51%), Gaps = 28/352 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
E+HPEN +R+++I L ++ A+ + S H+ +I + E D
Sbjct: 32 EEHPENPERLRSIWRKLNAAGVASRCVALKAKEAEDKYIASVHSKRHIKLMKEISSTIYD 91
Query: 103 KAGGKMV--CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ K+ + LN GS +A+LA G+ + + V G A ALVRPPGHHA+
Sbjct: 92 ASRNKIARKFNSIYLNKGSSESAVLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHDE 151
Query: 161 ADGYCFLNNAGLAVQLALNS----GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-M 215
A G+C NN +A LN G K++++D DVH+GNGT + FY +VL S+H
Sbjct: 152 AMGFCLFNNVAVAANYLLNERPDLGIKKILIVDWDVHHGNGTQKMFYDDPRVLFFSVHRF 211
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVHAMTELVVPAIQKFEPN 274
++GS+ PS + + +GE G GYN+N+P +G GD Y+ A +++P + F+P+
Sbjct: 212 DYGSFYPSE-GDASHCFIGEEAGKGYNINVPWEHGKCGDADYIAAWDHVLLPVTKVFDPD 270
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
+I++ G D++ DP G C+T +GY + + + L ++ GR+++ EGGY+
Sbjct: 271 IILVSAGFDAALGDPLGGCCITPNGYALL--LTKLLG--FAQGRIVMALEGGYN------ 320
Query: 335 CLHATLEGVLNLPLALLSDPIAY-YPEDEAFPV--KVIESIKQYQNDVIPFL 383
L + V LL D + PE + F +VI++++ P L
Sbjct: 321 -LRSIANSVCACAKVLLGDKFTFNTPEMQPFESTWRVIQAVRNELKTCWPVL 371
>gi|156846508|ref|XP_001646141.1| hypothetical protein Kpol_1039p32 [Vanderwaltozyma polyspora DSM
70294]
gi|156116814|gb|EDO18283.1| hypothetical protein Kpol_1039p32 [Vanderwaltozyma polyspora DSM
70294]
Length = 659
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 172/341 (50%), Gaps = 45/341 (13%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILK-----RGPISPYISWHSGIPAQIP------------ 84
+ E ++ HPE+ RI I IL R P I + +IP
Sbjct: 29 SYYEYIDPHPEDPRRIYRIYKILAENGLIRDPALSGIDDIGDLMCKIPVREATSEEILEV 88
Query: 85 ----QLLSFHTPDYIN--ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
QL Y+N EL+ + G D N S+ +A L+ G + A K ++
Sbjct: 89 HPKEQLEYLEKTQYLNRDELLSKTELG-----DSVYFNNDSYFSAKLSCGGAIEACKAIV 143
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYG 195
DG K + A+VRPPGHH++P +A G+C +N +A + L + KV+++D D+H+G
Sbjct: 144 DGKVKNSLAIVRPPGHHSEPEVAGGFCLFSNVAVATKNILKNYPDKVKKVMIVDWDIHHG 203
Query: 196 NGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGD 253
NGT + FY ++VL +SLH G + P +G D++GEG+G G+N NIP G GD
Sbjct: 204 NGTQKAFYNDDRVLYVSLHRFELGKYYPG-TIHGQYDQVGEGKGEGFNCNIPWSVGGIGD 262
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y+ A ++V+P ++F P+++++ G D++ D G+ +T Y M +++SLA+
Sbjct: 263 AEYIWAFEQIVMPMGREFRPDLVIVSSGFDAADGDTIGKCHVTPSCYGHMTHMLKSLAN- 321
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
G+L +V EGGY+ L A L + L+ +P
Sbjct: 322 ---GKLCVVLEGGYN-------LDAIARSALAVAKVLIGEP 352
>gi|383864231|ref|XP_003707583.1| PREDICTED: histone deacetylase 6-like [Megachile rotundata]
Length = 1169
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 184/370 (49%), Gaps = 32/370 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ V +D+ ML H +D D HPE +RI I + +
Sbjct: 537 VCVVYDERMLKH------YDISDD--------SHPEKPNRISAIYKKYQTYNLLERCYVQ 582
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTT 130
G A + +LL H+ +YI+++ + K + + L+ +W +A ++ G+
Sbjct: 583 QGRSATMKELLLVHSQEYIDKIKSVENLKPKELSKQATSYNSVYLHSETWTSACVSTGSL 642
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVID 189
L + VL+G + A+VRPPGHHA+ A G+C NN +A + A+ KV+++D
Sbjct: 643 LQVVDSVLNGESQSGIAIVRPPGHHAEQDAACGFCIFNNISIAARYAIEFHNIKKVLIVD 702
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL- 247
DVH+GNGT F + KVL IS+H ++G++ P + + +G G G G+N+NIP
Sbjct: 703 WDVHHGNGTQAVFEKDPKVLYISIHRYDNGAFFP-NSKRANYTYVGSGPGEGFNINIPWN 761
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
G GD Y+ A ++V+P +F P +I++ G D+ DP G +T + Y + +
Sbjct: 762 KKGMGDTEYIAAFQQVVMPIAYQFNPELILVSAGFDACIGDPLGGCYVTPEMYGHLTHWL 821
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV- 366
SLA+ GR+++ EGGY++ ++ + + +L PL +L P A
Sbjct: 822 SSLAN----GRIILSLEGGYNINSVSHAMTICTKTLLGDPLPILES--GQIPCTSAIHSI 875
Query: 367 -KVIESIKQY 375
V++S+KQY
Sbjct: 876 NNVLKSLKQY 885
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 135/246 (54%), Gaps = 8/246 (3%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D ++P ++ + LAVG+T++ ++++ G+ + A++RPPGHHA + GYCF NN
Sbjct: 196 DAVYIHPSTYKLSQLAVGSTINLIENICKGYIQNGMAIIRPPGHHAMKSEYCGYCFFNNV 255
Query: 171 GLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNG 228
+A + AL N+ K++++D DVH+G T + FY +V+ S+H +G + P + +
Sbjct: 256 AIAAESALRNNLAKKILIVDWDVHHGQATQQMFYNDPRVIYFSIHRFENGEFWP-NLRES 314
Query: 229 TVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+G+G G GYN NIPL G + Y+ ++++P +F+P+++++ G D++
Sbjct: 315 NFHFVGDGLGEGYNFNIPLNKTGMTNADYLAIFQQVLLPVAYEFQPDLVLVSAGYDAALG 374
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
P G +T Y + + LA G++ +V EGGY + A TL +L P
Sbjct: 375 CPEGEMLVTPACYAHLLSSLLCLA----SGKVAVVLEGGYCLKSLAESAALTLRTLLGDP 430
Query: 348 LALLSD 353
+L +
Sbjct: 431 CPILQN 436
>gi|297797055|ref|XP_002866412.1| hypothetical protein ARALYDRAFT_919345 [Arabidopsis lyrata subsp.
lyrata]
gi|297312247|gb|EFH42671.1| hypothetical protein ARALYDRAFT_919345 [Arabidopsis lyrata subsp.
lyrata]
Length = 660
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 186/375 (49%), Gaps = 44/375 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G E HPE DRI+ I L+ +S
Sbjct: 27 VGLIYDEAMCKHDTPDG--------------EDHPECPDRIRVIWEKLQLAGVSQRCVLL 72
Query: 77 SGIPAQIPQLLSFHTPDYIN-----ELVEADKAGGKMVC--DGTVLNPGSWGAALLAVGT 129
A+ L HT D++N + D ++ + LN GS AA LA G+
Sbjct: 73 GSSKAEDKHLQLVHTKDHVNLVKSISTKQKDYQRNRIASQLNSIYLNRGSSEAAYLAAGS 132
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGKV 185
+ + V +G YA+VRPPGHHA+ A G+C NN +A LN G K+
Sbjct: 133 VVKVAEKVAEGELDCGYAIVRPPGHHAEADEAMGFCLFNNIAVAASYLLNQRPDLGVKKI 192
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D DVH+GNGT + F+ +VL S+H + +GS+ P+ +G + +GEG G G+N+N
Sbjct: 193 LIVDWDVHHGNGTQKMFWEDPRVLFFSVHRHEYGSFYPA-GDDGDYNMVGEGPGEGFNIN 251
Query: 245 IPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
+P G GD Y+ A +++P ++F P++I+L G D++ DP G +T Y M
Sbjct: 252 VPWDQGRCGDADYLAAWDHILIPVAREFNPDIILLSAGFDAAIGDPLGGCRVTPYAYSVM 311
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEA 363
++ L + ++ G++++ EGGY+ L + + L LL D + EA
Sbjct: 312 ---LKKLME-FAHGKIVMALEGGYN-------LDSIAKSSLACVQVLLGDK-QIHGSSEA 359
Query: 364 FPV----KVIESIKQ 374
+P +VI+++++
Sbjct: 360 YPFESTWRVIQAVRK 374
>gi|188997126|ref|YP_001931377.1| histone deacetylase superfamily protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932193|gb|ACD66823.1| histone deacetylase superfamily [Sulfurihydrogenibium sp. YO3AOP1]
Length = 306
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 163/330 (49%), Gaps = 27/330 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ F+DD L HDTG G HPE+ +R+ I L+ PI +
Sbjct: 4 VGYFYDDIYLEHDTGIG----------------HPESPERLIYINKYLE--PIKDKLIHL 45
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
A ++ H Y E+++ AGG + T + S+ AA++AVG L A+ +
Sbjct: 46 KPRRASAKEITLIHDIYYPQEIMDFCAAGGGYLDPDTHVGEYSYEAAVMAVGAGLEAIDN 105
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+++G + A+ VRPPGHHA+ A G+C NN + + G KV +ID D H+GN
Sbjct: 106 IVNGKIERAFCAVRPPGHHAEKDKAMGFCIFNNIAITARYVQQKGFNKVFIIDFDAHHGN 165
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY + V S H P +P G+ +E G G+G+GY N+PLP GTGD Y
Sbjct: 166 GTQKAFYDDDTVFYFSTHEY-----PFYPGTGSKNEKGVGKGYGYTYNVPLPAGTGDEVY 220
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
++ + ++ F P++I++ G D DP ++ +G +G IV ++ + +
Sbjct: 221 TEIYSQTLPELVKSFNPDIILVSAGYDLHQDDPLTYLEVSTEG---IGTIVENIL-KSAD 276
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
+ + EGGY++ + T+E +L +
Sbjct: 277 VPYVFMLEGGYNLNALGESVRLTIEKMLYI 306
>gi|448627024|ref|ZP_21671699.1| acetoin utilization protein [Haloarcula vallismortis ATCC 29715]
gi|445759652|gb|EMA10928.1| acetoin utilization protein [Haloarcula vallismortis ATCC 29715]
Length = 335
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 154/300 (51%), Gaps = 16/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK Y++ A I + H DYI+E E D GG
Sbjct: 17 RHPESPDRLRAIRRALKENHGVEYVA---ADDADIDLVREVHDTDYISEFREFCDDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D TV +W AAL + G + A + LDG+ ++L RPPGHHA A G+C
Sbjct: 74 WDAD-TVAVEETWDAALASAGLAVWAAEAALDGNSGRDTPFSLGRPPGHHAVGDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F+NNA +A Q AL + +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 133 FINNAAVAAQAALETDADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHED-----GLYP 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + E G G+ G NLN+ G Y+ A+ E + PAI+ ++P+++++ G D+
Sbjct: 188 GTGDISETGTGDADGTNLNVKYKPGADTVDYLAAIDECIAPAIEDYDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY M +RSL D L I+ EGGY ++ S +H +G
Sbjct: 248 EHDPISRMRVSTEGYGAMTDRMRSLTDACDAA-LGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|198470023|ref|XP_001355195.2| GA19406 [Drosophila pseudoobscura pseudoobscura]
gi|198147145|gb|EAL32252.2| GA19406 [Drosophila pseudoobscura pseudoobscura]
Length = 1095
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 14/308 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV------EADK 103
HPE RI+ I + + + + S A ++ H+ ++N + + D
Sbjct: 529 HPEQPKRIQFIHKMHQDYQLLGRMKQLSARAATTDEICLAHSRSHVNTMRRVLGRDKEDL 588
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ L+P ++G A LA G+ L A+ VL G + A VRPPGHHA+P G
Sbjct: 589 QAQAATYNSVYLHPATFGCATLAAGSVLQAVDSVLRGESRSAICNVRPPGHHAEPDQPHG 648
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL IS+H +G++
Sbjct: 649 FCIFNNVAIAAQYAIREFGLKRVLILDWDVHHGNGTQHIFESNPKVLYISVHRYENGTFF 708
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P P +G D +G+ G G+N+NIP G GD Y A ++V+P +F+P ++++
Sbjct: 709 PKGP-DGNYDVVGKHTGAGFNVNIPWNKKGMGDLEYALAFQQIVMPIAYEFQPELVLVSA 767
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D++ DP G ++ +GY + +LA GGR+++ EGGY+V +Y +
Sbjct: 768 GFDAAIGDPLGGCKVSPEGYGLFTHWLSALA----GGRIIVCLEGGYNVNSISYAMTMCT 823
Query: 341 EGVLNLPL 348
+ +L P+
Sbjct: 824 KTLLGDPV 831
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 163/328 (49%), Gaps = 31/328 (9%)
Query: 39 FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
+DP LE ++ DR + + + P+S + A ++L HT + EL
Sbjct: 95 WDPKHLECPDRFNRVLDRCNELKLLDRCLPVSARL-------ATKQEILRLHTAQHF-EL 146
Query: 99 VEA------DKAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
+E D++ ++ D ++P ++ +LLA G+T+ + ++ G + A++R
Sbjct: 147 LEQTSEVCDDQSMEELSSRFDSIYIHPSTFQCSLLASGSTIDLVDSIITGKAQNGMAIIR 206
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA +GYCF NN LA Q AL+ +++++D DVH+G GT FY +VL
Sbjct: 207 PPGHHAMKAEFNGYCFFNNVALAAQHALDVHKLERILILDYDVHHGQGTQRFFYNDPRVL 266
Query: 210 TISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPA 267
S+H HG++ P H Q +GEG G G+N N+PL G GD Y+ +L++P
Sbjct: 267 YFSIHRFEHGAFWP-HLQESDYHAIGEGPGLGFNFNVPLNETGMGDGDYMAIFQQLLLPV 325
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+++P +I++ G D++ P G +T Y + + LAD R+ +V EGG
Sbjct: 326 AMEYQPELIIVSAGYDAALGCPEGEMQVTPAFYAHLLNPLLRLAD----SRVAVVLEGG- 380
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPI 355
YCL + EG LL DP
Sbjct: 381 ------YCLESLAEGAALTMRTLLGDPC 402
>gi|298674668|ref|YP_003726418.1| histone deacetylase superfamily protein [Methanohalobium
evestigatum Z-7303]
gi|298287656|gb|ADI73622.1| histone deacetylase superfamily [Methanohalobium evestigatum
Z-7303]
Length = 454
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 142/263 (53%), Gaps = 9/263 (3%)
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
LL HT Y++ + K GG + D T + ++ A ++ G + + + V+D + +
Sbjct: 151 LLKIHTKSYVSFIKNYSKKGGGFLGDSTYVTKDTYDVAKMSAGAAIRSAELVIDNNYSYS 210
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAG-LAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYR 204
+AL+RPPGHHA + G+C NNA LA L G KV+++D D H GNGT + FY
Sbjct: 211 FALLRPPGHHAGKSRYGGFCIFNNAAILARYLQQKKGIEKVMIVDWDAHAGNGTMDIFYD 270
Query: 205 SNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
V+T+S+H + + +P+ G + ++GEG G GYN+NI +P G+ + Y A E++
Sbjct: 271 DPDVITLSIHRSPHDF---YPRTGFMSQIGEGAGEGYNINIEMPVGSENVEYKLAFDEVI 327
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
+P I++ P+ ++ G D + + LT GY +M R ++S+ +I+ E
Sbjct: 328 IPLIKRHSPDFLICCCGFDGYYQEKTVQMNLTSKGYYQMIRSIKSVFPE----NFVILME 383
Query: 325 GGYHVTYSAYCLHATLEGVLNLP 347
GGYH C H+ + +L+ P
Sbjct: 384 GGYHKHNGKLC-HSVINALLDRP 405
>gi|195356210|ref|XP_002044573.1| GM20078 [Drosophila sechellia]
gi|194132204|gb|EDW53826.1| GM20078 [Drosophila sechellia]
Length = 619
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 161/310 (51%), Gaps = 18/310 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 41 HPEQPSRIQHIHKMHDDYGLLTQMKQLSARAATTDEVCLAHTRAHVNTVRRLLGREPKEL 100
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A+LA G+ L A+ VL G + VRPPGHHA+
Sbjct: 101 HDAAG--IYNSVYLHPRTFDCAVLAAGSVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 158
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 159 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 218
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +LV+P +F P ++++
Sbjct: 219 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLVMPIAYEFNPQLVLV 277
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 278 SAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 333
Query: 339 TLEGVLNLPL 348
+ +L P+
Sbjct: 334 CTKTLLGDPV 343
>gi|365991928|ref|XP_003672792.1| hypothetical protein NDAI_0L00640 [Naumovozyma dairenensis CBS 421]
gi|410729811|ref|XP_003671084.2| hypothetical protein NDAI_0G00650 [Naumovozyma dairenensis CBS 421]
gi|401779903|emb|CCD25841.2| hypothetical protein NDAI_0G00650 [Naumovozyma dairenensis CBS 421]
Length = 689
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 165/311 (53%), Gaps = 28/311 (9%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILK-----RGPISPYISWHSGIPAQIP-------QLLSF 89
+ E ++ HPE+ RI I IL + P I + +IP ++L
Sbjct: 58 SYFEYIDPHPEDPRRIYRIYKILAENGLIKDPTLSGIDDIGDLMLKIPVREATSEEILEV 117
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ ++++ + K + + D N S+ +A L VG + A K V++G K
Sbjct: 118 HSKEHLDFIESTSKMNREQLLKATESGDSVYFNSDSYASAKLPVGGAIEACKAVVEGRVK 177
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A+VRPPGHHA+P A G+C +N +A + L + K++++D D+H+GNGT +
Sbjct: 178 NALAVVRPPGHHAEPEAAGGFCLFSNVAIAAKNILKNYPESVRKILILDWDIHHGNGTQK 237
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY +++L +SLH G + P +G D+ GEG+G G+N NI P G GD Y+
Sbjct: 238 AFYDDDRILYVSLHRFKMGKYYPG-TIHGRYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 296
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 297 AFEQIVMPMGREFQPDLVIISAGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 352
Query: 319 LLIVQEGGYHV 329
+ +V EGGY++
Sbjct: 353 MAVVLEGGYNL 363
>gi|145588697|ref|YP_001155294.1| histone deacetylase superfamily protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145047103|gb|ABP33730.1| histone deacetylase superfamily [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 306
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 152/294 (51%), Gaps = 16/294 (5%)
Query: 41 PGFL--EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
P FL E+ HPE +RI+ I L R I ++ A QL H+PD+I +
Sbjct: 9 PDFLKHEMGSHHPECPERIQAINDQLIRSGIDVFLHHLDAPLASEEQLELVHSPDHIAFV 68
Query: 99 VEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
E G + DG T++NP +W AAL A G ++ + V+ G + + +RPPGHHA+
Sbjct: 69 KEQAPESGYAMLDGDTIMNPFTWTAALRASGAAIAGVDAVMKGEVENVFCAIRPPGHHAE 128
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
PT + G+C +N +A + A+ + G +V +ID DVH+GNGT F+ VL S +
Sbjct: 129 PTRSMGFCLFDNVAIAARYAMEAYGIDRVAIIDFDVHHGNGTEAAFFNDPNVLMCSFFQH 188
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
P +P +G + +N+PLP T + E +PA++ FEP +I
Sbjct: 189 -----PFYPYSGL-------DHANNMVNVPLPAATRGDVVRSIVDERWMPALRNFEPQLI 236
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
++ G D+ D G+ L + Y + R ++ +A+ Y+ GR++ EGGY+++
Sbjct: 237 IISAGFDAHREDDLGQMGLVEEDYAWITRRLKEIANEYAQGRIVSCLEGGYNLS 290
>gi|289581869|ref|YP_003480335.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|448282720|ref|ZP_21474004.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|289531422|gb|ADD05773.1| Histone deacetylase [Natrialba magadii ATCC 43099]
gi|445575684|gb|ELY30152.1| histone deacetylase [Natrialba magadii ATCC 43099]
Length = 344
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 150/303 (49%), Gaps = 19/303 (6%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK+ Y+ P I + + H DYI + E + GG
Sbjct: 17 RHPESPDRLRAIRERLKKKHGVEYVE---ADPCPIDDIAAIHDRDYIESVKEFCEDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D T + +W A + G A+ L G K +A+ RPPGHHA P A G+C
Sbjct: 74 WDPDTTAVEE-TWDAICASAGQACWAVDAALAGDSGRKTPFAIGRPPGHHAVPDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
F NN +A Q AL+ +V + D DVH+GNGT + F + V +S+H
Sbjct: 133 FANNVAIAAQHALDHDEYDVDRVAIFDWDVHHGNGTQDIFEDRDDVFFVSIHEQ-----G 187
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P G V+E G G+G G +NIP+P GT D GY+ A + A++ F+P+++++ G
Sbjct: 188 LYPGTGDVEETGSGDGAGTTMNIPMPAGTSDAGYLAAFDGPITAALESFDPDLLLISAGF 247
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHAT 339
D+ DP R L+ + Y + VR+ +D L + EGGY + S +H T
Sbjct: 248 DAHRHDPISRIRLSTEAYALLTDRVRTRSDELD-APLAFILEGGYGLDVLADSVSIVHET 306
Query: 340 LEG 342
+G
Sbjct: 307 FDG 309
>gi|308478311|ref|XP_003101367.1| CRE-HDAC-6 protein [Caenorhabditis remanei]
gi|308263268|gb|EFP07221.1| CRE-HDAC-6 protein [Caenorhabditis remanei]
Length = 541
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 161/339 (47%), Gaps = 20/339 (5%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D N TG L GF+ E V KHPE+SDRI+ I L++ +
Sbjct: 1 MLFEDRQNNIKTGPTL--VGFNESQNEHENTVCPKHPESSDRIQKIKEALQQTKVLEKCH 58
Query: 75 -WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV---C---DGTVLNPGSWGAALLAV 127
S + L H + E+VE+ + + C D + S A +
Sbjct: 59 VLTSFLEIDDADLELTHAKSMVKEMVESKTKTQEEINSQCEKYDSIFMTENSIKVAKDGI 118
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
++ G +A++RPPGHHA + G+C NN A + A +G ++++
Sbjct: 119 ACVRDLTNRIMLGEAMNGFAVIRPPGHHADSSQPCGFCIFNNVAQAAEEAFFNGAERILI 178
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D+DVH+G GT FY +VL S+H HG + P P++ D +G G G GYN NIP
Sbjct: 179 VDLDVHHGQGTQRIFYEDKRVLYFSIHRYEHGVYWPHLPESD-FDHIGAGVGLGYNANIP 237
Query: 247 L-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
L G D Y+ + +++P +F+P+ +++ G DS DP G LT DGY
Sbjct: 238 LNETGCTDSDYLSILFHILLPLATQFDPHFVIISAGFDSLIGDPLGGMLLTPDGYSHFIY 297
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
++SLA GRLL+V EGGY+ SA + +L
Sbjct: 298 HLKSLAQ----GRLLVVLEGGYNHQMSAVAAQKCVRVLL 332
>gi|260942271|ref|XP_002615434.1| hypothetical protein CLUG_04316 [Clavispora lusitaniae ATCC 42720]
gi|238850724|gb|EEQ40188.1| hypothetical protein CLUG_04316 [Clavispora lusitaniae ATCC 42720]
Length = 534
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 185/368 (50%), Gaps = 42/368 (11%)
Query: 43 FLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSFH 90
+ E ++ HPE+ RI I L + P I A ++L H
Sbjct: 158 YFEYIDPHPEDPRRIYRIYKKLAEAGLIQDSTLAGADELGPLICKIPIREATAEEILQVH 217
Query: 91 TPDYINELVEADKAGGKMVCDGT------VLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
T ++ + + + D T +N S+ +A L+ G + A K V++GH K
Sbjct: 218 TEKHLQFIAATEDMTRAQLLDETEKGDSIYVNNDSFLSAKLSCGGAIEACKAVVEGHVKN 277
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEG 201
A A+VRPPGHHA+P G+C +N +A + L + ++ ++D D+H+GNGT
Sbjct: 278 AMAIVRPPGHHAEPDAPGGFCLFSNVAVAAKNMLRAYPESVRRIAIVDWDIHHGNGTQRA 337
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
FY +VL +SLH +G + P + G D+ G G+G G++LNIP P+ G GD YV+A
Sbjct: 338 FYDDPRVLYVSLHRYENGRFYPG-TKFGGADQTGSGKGAGFSLNIPWPSAGVGDADYVYA 396
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+V+P + +F+P+++++ G D++A D G+ +T GY M +++ +A G+L
Sbjct: 397 FRRVVLPVLCEFDPDLVIVSAGFDAAAGDLIGQCHVTPAGYGHMTHMLKGVAR----GKL 452
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPED--EAFP-VKVIESIKQYQ 376
+V EGGY++ + A+ GV + L+ +P PE+ A P VIE+I
Sbjct: 453 AVVLEGGYNLE----SISASAVGVAKV---LVGEP----PEEPVRALPRADVIETIGAVV 501
Query: 377 NDVIPFLK 384
PF +
Sbjct: 502 RAHAPFWQ 509
>gi|380012501|ref|XP_003690319.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6-like [Apis
florea]
Length = 1179
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 168/344 (48%), Gaps = 28/344 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +DD ML H +D D HPE RI I + +
Sbjct: 551 VCIVYDDRMLKH------YDISDD--------NHPEKPHRINIIYKKFQEYNLLDRSYVQ 596
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTT 130
G A +LL HT +YI+++ K + + L+P +W +A ++ G+
Sbjct: 597 QGRSATKEELLLVHTKEYIDKIKNTKNLKSKELKKQAETYNSVYLHPETWSSACISTGSL 656
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVID 189
L + VL+G + A++RPPGHHA A G+C NN +A + A+ +V+++D
Sbjct: 657 LQVIDSVLNGESQSGIAIIRPPGHHATEDAACGFCIFNNVAIAAKYAIEFHHVKRVLIVD 716
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL- 247
DVHYGNGT F +KVL IS+H ++GS+ P+ + +G G G+ +NIP
Sbjct: 717 WDVHYGNGTQSIFEEDSKVLYISVHRYDNGSFFPN-SKRANYSYVGSESGEGFTVNIPWN 775
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
G GD Y+ A ++++P +F P +I++ G D+ DP G +T + Y + +
Sbjct: 776 KKGMGDAEYIAAFQQIIMPIAYQFNPELILISAGFDACIGDPLGGCFVTPELYGHLTHWL 835
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALL 351
SLA+ GR+++ EGGY+ A+ + + +L PL +L
Sbjct: 836 SSLAN----GRVILSLEGGYNTNSVAHAMAICTKSLLGDPLPML 875
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 136/259 (52%), Gaps = 19/259 (7%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D ++P ++ +LLAVG+T++ ++ + G + A++RPPGHHA + GYCF NN
Sbjct: 191 DAIYIHPSTYRLSLLAVGSTINLVESICKGEIQNGMAIIRPPGHHAMKSEYCGYCFFNNV 250
Query: 171 GLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + L N+ K++++D DVH+G T + FY + +V+ S+H +G + P+ +
Sbjct: 251 AIAAEKVLCNNLASKILIVDWDVHHGQATQQMFYDNPQVIYFSIHRYENGEFWPN-LRES 309
Query: 229 TVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+G+ G GYN N+PL G + Y+ ++++P +F+P++I++ G D++
Sbjct: 310 NFHFVGDDLGEGYNFNVPLNKIGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALG 369
Query: 288 DPN-GRQCLTMDGY-----REMGRIVRSLA---------DRYSGGRLLIVQEGGYHVTYS 332
P + + G+ E G ++ + A + G++ ++ EGGY +
Sbjct: 370 CPEFNSNLIIIXGFNLLIENEKGEMLITPACYAHLLSSLLCLASGKVAVILEGGYCLKSL 429
Query: 333 AYCLHATLEGVLNLPLALL 351
+ TL +LN P +L
Sbjct: 430 SESAALTLRTLLNDPCPML 448
>gi|218199973|gb|EEC82400.1| hypothetical protein OsI_26768 [Oryza sativa Indica Group]
Length = 695
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 189/383 (49%), Gaps = 42/383 (10%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M H T G E+HPEN +R++ I L ++
Sbjct: 13 VGLLYDERMCAHATPDG--------------EEHPENPERLRAIWRKLSADGVASRCMIM 58
Query: 77 SGIPAQIPQLLSFHTPDYINEL-----VEADKAGGKMV--CDGTVLNPGSWGAALLAVGT 129
A+ + S H+ ++I + E D K+ + N GS +A LA G+
Sbjct: 59 KAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGS 118
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGKV 185
+ + V G A ALVRPPGHHA+ A G+C NN +A LN G K+
Sbjct: 119 VIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKI 178
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D DVH+GNGT + FY +VL S+H ++GS+ P+ + + +GEG+G GYN+N
Sbjct: 179 LIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAE-GDASYCFIGEGDGKGYNIN 237
Query: 245 IPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
+P +G GD Y+ A +++P + F P+++++ G D++ DP G C+T +GY +
Sbjct: 238 VPWEHGKCGDADYIAAWDHVLLPVAETFNPDIVLVSAGFDAALGDPLGGCCITPNGYALL 297
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAY-YPEDE 362
+ + L ++ GR+++ EGGY++ A + A + LL D + P+ +
Sbjct: 298 --LTKLLG--FAQGRIVMALEGGYNLRSIANSVSACAK-------VLLGDKFRFDTPDMQ 346
Query: 363 AFPV--KVIESIKQYQNDVIPFL 383
F +VI++++ P L
Sbjct: 347 PFESSWRVIQAVRDELKTFWPIL 369
>gi|333988288|ref|YP_004520895.1| histone deacetylase superfamily protein [Methanobacterium sp.
SWAN-1]
gi|333826432|gb|AEG19094.1| histone deacetylase superfamily [Methanobacterium sp. SWAN-1]
Length = 350
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 148/287 (51%), Gaps = 10/287 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPEN +R+ I++ LK I A +L HT ++ + K GG
Sbjct: 18 HPENKERLNVIMNSLKEEGCLEKIDVLEPEAAINEDILRVHTRSHLENVKSFCKDGGGYW 77
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T +P ++ A LA G + A + VL+G + AY+L RPPGHHA+ A G+CF NN
Sbjct: 78 DFDTFASPETYKIAKLAAGGAIKASELVLNGQ-QSAYSLARPPGHHARRNNAMGFCFFNN 136
Query: 170 AGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ + K ++ D DVHYGNGTAE FY VL IS+H + + P G
Sbjct: 137 LAIALEYLRDVRNMKKFLIFDFDVHYGNGTAETFYEDPNVLYISIHQDPRTIFPG---KG 193
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
++E G G GYNLNIP+P G+ D Y+ + +++ PA ++F + L VG D D
Sbjct: 194 FIEETGADGGEGYNLNIPMPPGSADNDYIFMLDQILEPAAKEFGADFYFLDVGFDGHMDD 253
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
P R L+ D Y + + +A G ++++ EGGY++ + C
Sbjct: 254 PFSRIQLSDDFYPWIAGKMLDIA-----GPMVLILEGGYNLAALSRC 295
>gi|242054889|ref|XP_002456590.1| hypothetical protein SORBIDRAFT_03g038950 [Sorghum bicolor]
gi|241928565|gb|EES01710.1| hypothetical protein SORBIDRAFT_03g038950 [Sorghum bicolor]
Length = 430
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 165/334 (49%), Gaps = 32/334 (9%)
Query: 48 EKHPENSDRIKNIVSILKRGPISP------YISWHSGIPAQIPQLLSFHTPDYINELVEA 101
E HPE++ R+ IV L++ +SP + + PA + + H+ YI L +A
Sbjct: 85 EAHPESNKRVPAIVDALEKLELSPKHRGSQVLEIQNFNPASLDDVARVHSRSYITGLEKA 144
Query: 102 DKAG---GKMVCDGT---VLNPGSWGAALLAVGTTLSAMKHVLDGHG-----KIAYALVR 150
+ G + +GT ++ +LL+ G ++ + V+ + +ALVR
Sbjct: 145 MRRASDEGLIFIEGTGPTYATETTFQESLLSAGAGITLVDSVVAASKLGPNPPLGFALVR 204
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A + G +V++ID DVH+GNGT++ FY +
Sbjct: 205 PPGHHAVPQGPMGFCVFGNIAVAARYAQHQHGLKRVMIIDFDVHHGNGTSDAFYVDPDIF 264
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H G S+P G ++E+G+G+G G LN+PLP G GD +A E++ P+
Sbjct: 265 FLSTHQ----LG-SYPGTGKINEVGQGDGEGTTLNLPLPGGAGDYAMRYAFDEVIAPSAH 319
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D+ DP T + + ++ LA GGR + EGGY++
Sbjct: 320 RFKPDIILVSAGYDAHVLDPLAGLQFTTGTFYMLAFSIKQLAKELCGGRCVFFLEGGYNL 379
Query: 330 ---------TYSAYCLHATLEGVLNLPLALLSDP 354
T+ A+ +L + P L +P
Sbjct: 380 QSLSSSVADTFRAFLDETSLAAQFDDPAILFEEP 413
>gi|195163866|ref|XP_002022770.1| GL14573 [Drosophila persimilis]
gi|194104793|gb|EDW26836.1| GL14573 [Drosophila persimilis]
Length = 1095
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 14/308 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV------EADK 103
HPE RI+ I + + + + S A ++ H+ ++N + + D
Sbjct: 529 HPEQPKRIQFIHKMHEDYQLLGRMKQLSARAATTDEICLAHSRSHVNTMRRVLGRDKEDL 588
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ L+P ++G A LA G+ L A+ VL G + A VRPPGHHA+P G
Sbjct: 589 QAQAATYNSVYLHPATFGCATLAAGSVLQAVDSVLRGESRSAICNVRPPGHHAEPDQPHG 648
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL IS+H +G++
Sbjct: 649 FCIFNNVAIAAQYAIREFGLKRVLILDWDVHHGNGTQHIFESNPKVLYISVHRYENGTFF 708
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P P +G D +G+ G G+N+NIP G GD Y A ++V+P +F+P ++++
Sbjct: 709 PKGP-DGNYDVVGKHTGAGFNVNIPWNKKGMGDLEYALAFQQIVMPIAYEFQPELVLVSA 767
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D++ DP G ++ +GY + +LA GGR+++ EGGY+V +Y +
Sbjct: 768 GFDAAIGDPLGGCKVSPEGYGLFTHWLSALA----GGRIVVCLEGGYNVNSISYAMTMCT 823
Query: 341 EGVLNLPL 348
+ +L P+
Sbjct: 824 KTLLGDPV 831
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 164/328 (50%), Gaps = 31/328 (9%)
Query: 39 FDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
+DP LE ++ DR + + + P+S + A ++L HT + EL
Sbjct: 95 WDPKHLECPDRFNRVLDRCNELKLLDRCLPVSARL-------ATKQEILRLHTAQHF-EL 146
Query: 99 VEA------DKAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVR 150
+E D++ ++ D ++P ++ +LLA G+T+ + ++ G + A++R
Sbjct: 147 LEQTSEVCDDQSMEELSSRFDSIYIHPSTFQCSLLASGSTIDLVDSIITGKAQNGMAIIR 206
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA +GYCF NN LA Q AL+ +++++D DVH+G GT FY +VL
Sbjct: 207 PPGHHAMKAEFNGYCFFNNVALAAQHALDVHKLERILILDYDVHHGQGTQRFFYNDPRVL 266
Query: 210 TISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPA 267
S+H HG++ P H Q +GEG G G+N N+PL G GD Y+ +L++P
Sbjct: 267 YFSIHRFEHGAFWP-HLQESDYHAIGEGPGLGFNFNVPLNETGMGDGDYMAIFQQLLLPV 325
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+++P +I++ G D++ P G +T Y + + LAD R+ +V EGG
Sbjct: 326 AMEYQPELIIVSAGYDAALGCPEGEMQVTPAFYAHLLNPLLRLAD----SRVAVVLEGG- 380
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPI 355
YCL + EG LLSDP
Sbjct: 381 ------YCLESLAEGAALTMRTLLSDPC 402
>gi|242046202|ref|XP_002460972.1| hypothetical protein SORBIDRAFT_02g038550 [Sorghum bicolor]
gi|241924349|gb|EER97493.1| hypothetical protein SORBIDRAFT_02g038550 [Sorghum bicolor]
Length = 703
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 182/384 (47%), Gaps = 44/384 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +DD M H T G E+HPEN +R++ I L ++P
Sbjct: 17 VGLLYDDRMRAHATPDG--------------EEHPENPERLRAIWRKLNAEGVAPRCVAL 62
Query: 77 SGIPAQIPQLLSFHTPDYINELVEA-----DKAGGKMV--CDGTVLNPGSWGAALLAVGT 129
A+ + S H+ +I + E D K+ + N GS +A+LA G+
Sbjct: 63 KAKEAEDKYIASVHSKSHIKLMKEISSKKYDATRNKIARKFNSIYFNKGSSESAVLAAGS 122
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGKV 185
+ + V G A ALVRPPGHHA+ A G+C NN +A LN G K+
Sbjct: 123 VIEVAEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKI 182
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDE--LGEGEGFGYNL 243
+++D DVH+GNGT + FY +VL S+H +G +P G +GE G GYN+
Sbjct: 183 LIVDWDVHHGNGTQKMFYNDPRVLFFSVH--RFDYGSFYPAEGDASHCFIGEEGGKGYNI 240
Query: 244 NIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P +G GD Y+ A +++P + F+P++I++ G D++ DP G C+T +GY
Sbjct: 241 NVPWEHGKCGDADYIAAWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYAL 300
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAY-YPED 361
+ + + L ++ GR+++ EGGY+ L + V LL D + PE
Sbjct: 301 L--LTKLLG--FAQGRIVMALEGGYN-------LRSIANSVCACAKVLLGDKFTFNAPEM 349
Query: 362 EAFPV--KVIESIKQYQNDVIPFL 383
+ F VI++++ P L
Sbjct: 350 QPFESTWSVIQAVRNELKTCWPVL 373
>gi|163783701|ref|ZP_02178688.1| acetoin utilization protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159881026|gb|EDP74543.1| acetoin utilization protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 309
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 10/298 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +R+ +IV+ L+ + I + A+ ++ H P+Y+ E+ + KAGG +
Sbjct: 19 HPERKERLISIVNHLESSGLMKEILPVAPRRAKAEEVALNHDPNYVQEVHDFCKAGGGFL 78
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
T N S+ AL AVG L + +L G + A+ VRPPGHHA+ A G+C NN
Sbjct: 79 DPDTYANEHSYDVALTAVGGVLEGIDLILKGSIETAFCAVRPPGHHAEYAKAMGFCLFNN 138
Query: 170 AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGT 229
+ + G KV +ID D H+GNGT FY+ + V S H P +P G+
Sbjct: 139 VAVGARYLRKKGVDKVFIIDFDAHHGNGTQRSFYQDDSVFYFSTHEY-----PFYPGTGS 193
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
E G G+G GY LN+P+ G GD Y +L+ ++ F P+ +++ G D + DP
Sbjct: 194 AQEKGAGKGEGYTLNVPMQAGAGDEDYRPVYEKLLPKVMEDFSPDFVLVSAGYDLHSDDP 253
Query: 290 NGRQCLTMDGYREMGRIVRSLAD--RYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
++ +G R IV+S+ R G L EGGY++ + T+E +L+
Sbjct: 254 LTYLDVSTEGVR---MIVKSILKTCRKLGVPSLFALEGGYNLKALGESVGVTVEEMLS 308
>gi|115473213|ref|NP_001060205.1| Os07g0602200 [Oryza sativa Japonica Group]
gi|113611741|dbj|BAF22119.1| Os07g0602200 [Oryza sativa Japonica Group]
gi|222637409|gb|EEE67541.1| hypothetical protein OsJ_25020 [Oryza sativa Japonica Group]
Length = 695
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 189/383 (49%), Gaps = 42/383 (10%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M H T G E+HPEN +R++ I L ++
Sbjct: 13 VGLLYDERMCAHATPDG--------------EEHPENPERLRAIWRKLSADGVASRCMIM 58
Query: 77 SGIPAQIPQLLSFHTPDYINEL-----VEADKAGGKMV--CDGTVLNPGSWGAALLAVGT 129
A+ + S H+ ++I + E D K+ + N GS +A LA G+
Sbjct: 59 KAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGS 118
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGKV 185
+ + V G A ALVRPPGHHA+ A G+C NN +A LN G K+
Sbjct: 119 VIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKI 178
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D DVH+GNGT + FY +VL S+H ++GS+ P+ + + +GEG+G GYN+N
Sbjct: 179 LIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAE-GDASYCFIGEGDGKGYNIN 237
Query: 245 IPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
+P +G GD Y+ A +++P + F P+++++ G D++ DP G C+T +GY +
Sbjct: 238 VPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALL 297
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAY-YPEDE 362
+ + L ++ GR+++ EGGY++ A + A + LL D + P+ +
Sbjct: 298 --LTKLLG--FAQGRIVMALEGGYNLRSIANSVSACAK-------VLLGDKFRFDTPDMQ 346
Query: 363 AFPV--KVIESIKQYQNDVIPFL 383
F +VI++++ P L
Sbjct: 347 PFESSWRVIQAVRDELKTFWPVL 369
>gi|388514335|gb|AFK45229.1| unknown [Lotus japonicus]
Length = 413
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 167/351 (47%), Gaps = 33/351 (9%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGI------PAQIPQLLSFHTPDYINELVEA 101
E HPE+ R+ +IV+ L+ ++P I PA + + S H Y+ L
Sbjct: 68 ESHPESHFRVPSIVNALEEMKLTPKFRGSEIIELQHFEPASVDDIASVHARAYVFGL--- 124
Query: 102 DKAGGKMVCDGTVLNPGS---------WGAALLAVGTTLSAMKHVLDGHGKIA------Y 146
+K + + +G +L GS + +++A G L+ + V+ KI +
Sbjct: 125 EKVMDQAMEEGLILIEGSGPTYATSTTFQESIVAAGAGLALVDSVVAA-SKIKRDPPTGF 183
Query: 147 ALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRS 205
AL+RPPGHHA P G+C N +A + A +V +ID DVH+GNGT + FY
Sbjct: 184 ALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDD 243
Query: 206 NKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVV 265
+ +S H + S+P G DE+G G+G G LN+PLP G+GD E+VV
Sbjct: 244 PDIFFLSFHQDG-----SYPGTGKFDEVGTGDGEGTTLNLPLPGGSGDTAIRTVFDEVVV 298
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P Q+F+P++I++ G D DP T Y + ++ LA GGR + EG
Sbjct: 299 PCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEG 358
Query: 326 GYHVTYSAYCLHATLEGVL-NLPLAL-LSDPIAYYPEDEAFPVKVIESIKQ 374
GY++ +Y + + ++ + LA +P Y E A + I+ IK
Sbjct: 359 GYNLKSLSYSVADSFRALIGDQSLASEFDNPNILYEEPTAKIKQAIQRIKH 409
>gi|344213003|ref|YP_004797323.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula hispanica ATCC 33960]
gi|343784358|gb|AEM58335.1| acetoin utilization protein / histone deacetylase superfamily
[Haloarcula hispanica ATCC 33960]
Length = 335
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 154/300 (51%), Gaps = 16/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK Y++ A I + H DYI E E D GG
Sbjct: 17 RHPESPDRLRAIRRALKENHGVEYVT---ADDADIDLVREVHDTDYIEEFREFCDDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D TV +W AAL + G + A + LDG+ ++L RPPGHHA A G+C
Sbjct: 74 WDAD-TVAVEETWDAALASAGLAVWAAEAALDGNAGRDTPFSLGRPPGHHAVGDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F+NNA +A Q AL + +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 133 FINNAAVAAQAALEADAERVAIFDWDVHHGNGTQDIFYDRSDVFYASIHED-----GLYP 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G ++E G G G NLN+ G Y+ A+ E + PAI+ ++P+++++ G D+
Sbjct: 188 GTGDIEETGTGNADGTNLNVKYKPGADTADYLAAIDECIAPAIEDYDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY M +RSL D Y L I+ EGGY ++ S +H +G
Sbjct: 248 EHDPISRMRVSTEGYGAMTDRMRSLTDAYDAA-LGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|218186539|gb|EEC68966.1| hypothetical protein OsI_37706 [Oryza sativa Indica Group]
Length = 443
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 44/358 (12%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGI---------PAQIPQLLSFHTPDYINEL 98
E HPE + R+ IV L++ ++ S H G PA + + H+ YI L
Sbjct: 98 EAHPETNKRVPAIVDALEKLELT---SKHRGSQVLEIQDFQPASLDDIALVHSRSYITGL 154
Query: 99 VEADKAGGKMVCDGTVLNPG----------------SWGAALLAVGTTLSAMKHVLDGHG 142
+KA + +G + G S GA ++ V + ++A K L
Sbjct: 155 ---EKAMSRASDEGLIFIEGTGPTYATQTTFQECLLSAGAGIILVDSVVAASK--LGPKP 209
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ +ALVRPPGHHA P G+C N +A + A N G +V++ID DVH+GNGT +
Sbjct: 210 PLGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDA 269
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY + +S H S+P G + ++G+G G G LN+PLP G+GD A
Sbjct: 270 FYDDPDIFFLSTHQLG-----SYPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFD 324
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E++ PA Q+F+P++I++ G D+ A DP T + + +R +A GGR +
Sbjct: 325 EVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIREVAAELCGGRCVF 384
Query: 322 VQEGGYHVTYSAYCLHATLEGVLNLP--LALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
EGGY++ + + T L P A DP Y E K+ E+I + ++
Sbjct: 385 FLEGGYNLESLSSSVADTFRAFLGEPSLAARFDDPAMLYEEPTR---KIREAIDKAKH 439
>gi|17540334|ref|NP_500788.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
gi|351063051|emb|CCD71098.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
Length = 863
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 164/339 (48%), Gaps = 20/339 (5%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D N TG L GF+ E V HPE+SDRI I L + I +
Sbjct: 1 MLFEDRQKNRSTGPTLI--GFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCT 58
Query: 75 WHSG-IPAQIPQLLSFHTPDYINELVEADKAGGKMV---C---DGTVLNPGSWGAALLAV 127
+ + L H + +L+E++K + + C D + S A V
Sbjct: 59 VLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQCEKYDSVFMTENSMKVAKDGV 118
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
++ +A+VRPPGHHA G+C NN A + A SG ++++
Sbjct: 119 ACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFSGAERILI 178
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D+DVH+G+GT FY +VL S+H + HG + P P++ D +G G+G GYN N+
Sbjct: 179 VDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESD-FDHIGSGKGLGYNANLA 237
Query: 247 L-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
L G D Y+ + +++P +F+P+ +++ G D+ DP G CLT DGY +
Sbjct: 238 LNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILY 297
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
++SLA GR+L+V EGGY+ SA + + +L
Sbjct: 298 HLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 332
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 25/370 (6%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPD 93
F+ G D F + HPE R + I+ L+ G + + + A ++ HT
Sbjct: 431 FNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKK 490
Query: 94 YINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVL--DGHGKI 144
+ L + + + + L + A AVG L ++ + D +
Sbjct: 491 MLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN 550
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFY 203
A +VRPPGHHA + + G+C NN +A + A K V+++D DVH+GNGT E FY
Sbjct: 551 ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFY 610
Query: 204 RSNKVLTISLHM-NHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAM 260
+ V+ +S+H + G++ P P++ + ++GEG G G ++N+P GD Y A
Sbjct: 611 EDSNVMYMSIHRHDKGNFYPIGEPKDYS--DVGEGAGEGMSVNVPFSGVQMGDNEYQMAF 668
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+++P +F P+++++ G D++ DP G +T + + M + SLA GGR++
Sbjct: 669 QRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLA----GGRII 724
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLP----LALLSDPIAYYPED-EAFPVKVIESIKQY 375
V EGGY++T + A E + N L + A P+ E+ +K I +
Sbjct: 725 TVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAV 784
Query: 376 QNDVIPFLKG 385
Q LKG
Sbjct: 785 QQKYWSILKG 794
>gi|448303726|ref|ZP_21493675.1| histone deacetylase [Natronorubrum sulfidifaciens JCM 14089]
gi|445593511|gb|ELY47689.1| histone deacetylase [Natronorubrum sulfidifaciens JCM 14089]
Length = 340
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 153/311 (49%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE DR++ I LKR Y+ P I + + H Y+ +
Sbjct: 13 DPG-----SRHPETPDRLRAIRERLKRKHGVEYVE---ADPCDIETMATVHERAYLESVE 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
+ GG T +W A + G A+ L+G + +++ RPPGHHA
Sbjct: 65 QFCADGGGNWDPDTTAVEETWDAVRHSAGLACWAVDAALEGDSGRETPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NN +A Q AL++ +V ++D DVH+GNGT + FY + V +S+H
Sbjct: 125 YDDAMGFCFVNNVAVAAQHALDADEHDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSIH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G +DE GEG G G +N+P+P GT D+ Y+ A+ VV A+ F+P+
Sbjct: 185 EQ-----GLYPGTGAIDETGEGAGDGTTMNVPMPAGTDDQDYLSAVEGPVVSALSAFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
+++ G D+ DP R L+ + Y M +R+LAD L V EGGY +
Sbjct: 240 CLLISAGFDAHRHDPISRIRLSTEAYALMTDRLRTLADDVDAA-LAFVLEGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVAIVHETFDG 309
>gi|302343340|ref|YP_003807869.1| histone deacetylase superfamily protein [Desulfarculus baarsii DSM
2075]
gi|301639953|gb|ADK85275.1| histone deacetylase superfamily [Desulfarculus baarsii DSM 2075]
Length = 343
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 23/316 (7%)
Query: 27 NHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQL 86
HD G+ + PG L VL++ ++N +R P+ A +L
Sbjct: 13 EHDPGRFHVEV---PGRLRVLDQAMRGWTGLRNC----QRMPLRQ---------ATEAEL 56
Query: 87 LSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAY 146
H P +I + + + D T ++P S+ AALLA G+ + + GH
Sbjct: 57 RRVHHPAHIARVAATEGKHTALDAD-TGVSPRSFEAALLAAGSLIDLCDRAMIGHFYNGM 115
Query: 147 ALVRPPGHHAQPTMADGYCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRS 205
ALVRPPGHHA P A G+C NN +A L G +V+++D DVH+GNGT + FY
Sbjct: 116 ALVRPPGHHATPDRAMGFCLFNNVAVAAAHLIEARGLERVLIVDWDVHHGNGTEDTFYSE 175
Query: 206 NKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVV 265
+V+ S H + P +P +G V +G G G G +N P+ G GD Y+ +L+
Sbjct: 176 GRVMYFSTHQS-----PMYPGSGPVSAVGSGAGEGRTVNAPMSAGRGDLEYIRVFKDLLT 230
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P + F+P I++ G D+ DP G +T G+ + +I+ L+ + GRL++ EG
Sbjct: 231 PIARCFKPQFILVSAGFDAHHEDPLGGMRITSSGFAALTQILMELSSEFCPGRLVLTLEG 290
Query: 326 GYHVTYSAYCLHATLE 341
GY V+ A + A L+
Sbjct: 291 GYAVSALARSVLACLD 306
>gi|300023490|ref|YP_003756101.1| histone deacetylase superfamily protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525311|gb|ADJ23780.1| histone deacetylase superfamily [Hyphomicrobium denitrificans ATCC
51888]
Length = 314
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 144/309 (46%), Gaps = 30/309 (9%)
Query: 24 GMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
LNHDTG+G HPE DR++ I L + + +
Sbjct: 10 AFLNHDTGEG----------------HPERPDRMRAIDKFLSDASFAKLDRRLAPLRDDD 53
Query: 84 PQLLSF-HTPDYINEL---VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
++ H DY+ L E K G + TV++PGSW AA AVG L A+ HV+
Sbjct: 54 LDFVALAHRQDYVQGLKRFAETVKEGQHHIDGDTVVSPGSWEAARRAVGAGLDAVDHVVS 113
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGT 198
G A+ VRPPGHHA+ +A G+C NN +A A G +V V+D DVH+GNGT
Sbjct: 114 GAAANAFCQVRPPGHHAESNLAMGFCLFNNIAVAAHYARAKHGVERVAVVDFDVHHGNGT 173
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
E F+ + + S H P P G + E G G F N PL G G +
Sbjct: 174 QEIFWSNKNLFYGSTHQM-----PLFPGTGALQETGAGNIF----NAPLRAGDGRYHFEE 224
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A + ++ + F P++I++ G D+ DP G L + +R V LA R++ GR
Sbjct: 225 AFRDRILAPLHNFAPDLIMISAGFDAHQRDPLGGLELVEEDFRWATEAVAELARRHANGR 284
Query: 319 LLIVQEGGY 327
L+ + EGGY
Sbjct: 285 LVSILEGGY 293
>gi|359684037|ref|ZP_09254038.1| histone deacetylase [Leptospira santarosai str. 2000030832]
gi|410447986|ref|ZP_11302074.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|418744203|ref|ZP_13300559.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|418751647|ref|ZP_13307929.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|421111560|ref|ZP_15572034.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|409967950|gb|EKO35765.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|410018191|gb|EKO80235.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|410794654|gb|EKR92554.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|410802969|gb|EKS09113.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|456876209|gb|EMF91332.1| histone deacetylase family protein [Leptospira santarosai str.
ST188]
Length = 313
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 145/283 (51%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H E+SDR+ ++ L + S + +P++ H+ ++ ++ + G
Sbjct: 22 HYESSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEF--FNEIHSNAHLQKIERSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW AA A + ++ +L G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWIAAYSAANSGITLADALLSGTIKNGFSLLRPPGHHAERNRIMGFCIL 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 139 NNVAITARYLQKNGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ EG G NIP+ + ++ Y+ E+V+P ++ F P++++L G D+
Sbjct: 194 GLSSEAGKDEGIGTTKNIPMQANSDNQSYIQKFKEVVIPTMEHFGPDIVLLSAGFDAHKE 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV AD+ GG++L EGGY +T
Sbjct: 254 DPLGGMNITTKGFEDLTKIVLESADKICGGKVLSFLEGGYDLT 296
>gi|34394912|dbj|BAC84464.1| putative histone deacetylase [Oryza sativa Japonica Group]
Length = 665
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 174/341 (51%), Gaps = 32/341 (9%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M H T G E+HPEN +R++ I L ++
Sbjct: 13 VGLLYDERMCAHATPDG--------------EEHPENPERLRAIWRKLSADGVASRCMIM 58
Query: 77 SGIPAQIPQLLSFHTPDYINEL-----VEADKAGGKMV--CDGTVLNPGSWGAALLAVGT 129
A+ + S H+ ++I + E D K+ + N GS +A LA G+
Sbjct: 59 KAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGS 118
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGKV 185
+ + V G A ALVRPPGHHA+ A G+C NN +A LN G K+
Sbjct: 119 VIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKI 178
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D DVH+GNGT + FY +VL S+H ++GS+ P+ + + +GEG+G GYN+N
Sbjct: 179 LIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAE-GDASYCFIGEGDGKGYNIN 237
Query: 245 IPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
+P +G GD Y+ A +++P + F P+++++ G D++ DP G C+T +GY +
Sbjct: 238 VPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALL 297
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ + L ++ GR+++ EGGY++ A + A + +L
Sbjct: 298 --LTKLLG--FAQGRIVMALEGGYNLRSIANSVSACAKVLL 334
>gi|217977029|ref|YP_002361176.1| histone deacetylase superfamily protein [Methylocella silvestris
BL2]
gi|217502405|gb|ACK49814.1| histone deacetylase superfamily [Methylocella silvestris BL2]
Length = 309
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 157/321 (48%), Gaps = 27/321 (8%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L+HDTG P F PE +DR++ I + I +
Sbjct: 12 LDHDTG---------PAF-------PERADRVRVIERTFE-SEIFYLLHRECAPELDYDA 54
Query: 86 LLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
LL H Y+ + A A G + D V++PG+W A +VG ++A+ V+ K
Sbjct: 55 LLHVHPESYVESIRAAAPAEGFFDLADDVVMSPGTWEALSHSVGGAVAAVDDVMRRRSKN 114
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFY 203
A+ +RPPGHHA+ A G+CF N A +A + ++ G +V ++D DVH+GNGT + F+
Sbjct: 115 AFVAMRPPGHHAETARAMGFCFFNLAAIAARRGQSAHGAERVAIVDFDVHHGNGTQQIFW 174
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
VL S H P +P G DE GE G +N PLP G R + AMT+
Sbjct: 175 SDPSVLYASTHQM-----PLYPFTGAADECGE---HGTIVNAPLPENAGSRMFREAMTQK 226
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
++P + F P++IV+ G D+ FDP G L + + + + +A+R + G L+ +
Sbjct: 227 ILPRVDAFCPDLIVVSAGFDAHRFDPIGGLHLEVADFTWITTQLMEIAERRAKGALVSIL 286
Query: 324 EGGYHVTYSAYCLHATLEGVL 344
EGGY + + C A ++ ++
Sbjct: 287 EGGYDLIALSRCSSAHVQTLM 307
>gi|115487670|ref|NP_001066322.1| Os12g0182700 [Oryza sativa Japonica Group]
gi|77553168|gb|ABA95964.1| Histone deacetylase family protein, expressed [Oryza sativa
Japonica Group]
gi|113648829|dbj|BAF29341.1| Os12g0182700 [Oryza sativa Japonica Group]
gi|215704191|dbj|BAG93031.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616744|gb|EEE52876.1| hypothetical protein OsJ_35446 [Oryza sativa Japonica Group]
Length = 443
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 44/358 (12%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGI---------PAQIPQLLSFHTPDYINEL 98
E HPE + R+ IV L++ ++ S H G PA + + H+ YI L
Sbjct: 98 EAHPETNKRVPAIVDALEKLELT---SKHRGSQVLEIQDFQPASLDDIALVHSRSYITGL 154
Query: 99 VEADKAGGKMVCDGTVLNPG----------------SWGAALLAVGTTLSAMKHVLDGHG 142
+KA + +G + G S GA + V + ++A K L
Sbjct: 155 ---EKAMSRASDEGLIFIEGTGPTYATQTTFQECLLSAGAGITLVDSVVAASK--LGPKP 209
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ +ALVRPPGHHA P G+C N +A + A N G +V++ID DVH+GNGT +
Sbjct: 210 PLGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDA 269
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY + +S H S+P G + ++G+G G G LN+PLP G+GD A
Sbjct: 270 FYEDPDIFFLSTHQLG-----SYPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFD 324
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E++ PA Q+F+P++I++ G D+ A DP T + + +R +A GGR +
Sbjct: 325 EVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIREVAAELCGGRCVF 384
Query: 322 VQEGGYHVTYSAYCLHATLEGVLNLP--LALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
EGGY++ + + T L P A DP Y E K+ E+I + ++
Sbjct: 385 FLEGGYNLESLSSSVADTFRAFLGEPSLAARFDDPAMLYEEPTR---KIREAIDKAKH 439
>gi|291278908|ref|YP_003495743.1| acetoin utilization protein AcuC [Deferribacter desulfuricans SSM1]
gi|290753610|dbj|BAI79987.1| acetoin utilization protein AcuC [Deferribacter desulfuricans SSM1]
Length = 331
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 150/319 (47%), Gaps = 32/319 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIV-----SILKRGPIS 70
++ + +D+ L H T +G HPE+ +R+K ++ S LK I
Sbjct: 1 MVKIVYDEVFLKHKTFQG----------------HPESPERLKTVINYLENSTLKSNIIK 44
Query: 71 PYISWHSGIPAQIPQLLSF-HTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGT 129
P + +++ F H+ YI E + K+ + S+ AL AV
Sbjct: 45 PLFEDYG------EKVIEFVHSKSYIQEFKDTAKSETFFQHKDNSICEDSFDVALKAVYA 98
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVI 188
L A +++ K + VRPPGHHA A G+CF NN + + + G K+++
Sbjct: 99 HLFAADYIMSNEPKKIFVAVRPPGHHADKNKALGFCFFNNIAITARYIQKYHGKEKILIF 158
Query: 189 DIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP 248
D DVH+GNGT FY N V +S+H H ++ P G E G+G G GY LNIPL
Sbjct: 159 DFDVHHGNGTQNIFYEDNTVYYVSIH-EHPTF--LFPGTGRYFETGKGLGKGYTLNIPLK 215
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
D + E VVP KFEP ++++ G D D G T + YR++G ++
Sbjct: 216 PEADDNEFGKVFLEKVVPIFYKFEPEILLVSAGFDGHKEDMIGDLNFTTELYRKLGYALK 275
Query: 309 SLADRYSGGRLLIVQEGGY 327
L++++ G LLI EGGY
Sbjct: 276 YLSNKFCEGHLLISLEGGY 294
>gi|17540332|ref|NP_500787.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
gi|30923304|sp|Q20296.2|HDA6_CAEEL RecName: Full=Histone deacetylase 6
gi|351063052|emb|CCD71099.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
Length = 955
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 164/339 (48%), Gaps = 20/339 (5%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D N TG L GF+ E V HPE+SDRI I L + I +
Sbjct: 1 MLFEDRQKNRSTGPTLI--GFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCT 58
Query: 75 WHSG-IPAQIPQLLSFHTPDYINELVEADKAGGKMV---C---DGTVLNPGSWGAALLAV 127
+ + L H + +L+E++K + + C D + S A V
Sbjct: 59 VLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQCEKYDSVFMTENSMKVAKDGV 118
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
++ +A+VRPPGHHA G+C NN A + A SG ++++
Sbjct: 119 ACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFSGAERILI 178
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D+DVH+G+GT FY +VL S+H + HG + P P++ D +G G+G GYN N+
Sbjct: 179 VDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESD-FDHIGSGKGLGYNANLA 237
Query: 247 L-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
L G D Y+ + +++P +F+P+ +++ G D+ DP G CLT DGY +
Sbjct: 238 LNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILY 297
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
++SLA GR+L+V EGGY+ SA + + +L
Sbjct: 298 HLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 332
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 25/370 (6%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPD 93
F+ G D F + HPE R + I+ L+ G + + + A ++ HT
Sbjct: 431 FNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKK 490
Query: 94 YINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVL--DGHGKI 144
+ L + + + + L + A AVG L ++ + D +
Sbjct: 491 MLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN 550
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFY 203
A +VRPPGHHA + + G+C NN +A + A K V+++D DVH+GNGT E FY
Sbjct: 551 ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFY 610
Query: 204 RSNKVLTISLHM-NHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAM 260
+ V+ +S+H + G++ P P++ + ++GEG G G ++N+P GD Y A
Sbjct: 611 EDSNVMYMSIHRHDKGNFYPIGEPKDYS--DVGEGAGEGMSVNVPFSGVQMGDNEYQMAF 668
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+++P +F P+++++ G D++ DP G +T + + M + SLA GGR++
Sbjct: 669 QRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLA----GGRII 724
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLP----LALLSDPIAYYPED-EAFPVKVIESIKQY 375
V EGGY++T + A E + N L + A P+ E+ +K I +
Sbjct: 725 TVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAV 784
Query: 376 QNDVIPFLKG 385
Q LKG
Sbjct: 785 QQKYWSILKG 794
>gi|417781233|ref|ZP_12428985.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
gi|410778484|gb|EKR63110.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
Length = 321
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 144/283 (50%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM- 108
H E+SDR+ +V I K S + S ++P FH L + +++ GK
Sbjct: 30 HYESSDRL--LVCINKLRQTSYFNSLFFPEMKKVPSEF-FHEIHSSTHLQKIERSKGKRG 86
Query: 109 -VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T SW AA A + ++ +L G K ++L+RPPGHHA+ G+C L
Sbjct: 87 YFDSDTPFTEKSWIAAYSAANSGITLADALLSGTIKNGFSLLRPPGHHAEHNRIMGFCML 146
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 147 NNVAITARYLQKNGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYPMT 201
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ EG NIP+ + + Y+ E+V+P ++ F P+++++ G D+
Sbjct: 202 GLSSETGKNEGIETTKNIPMQANSDSQAYIQKFKEVVIPTMEHFGPDVVLISAGFDAHKE 261
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV AD+ GG++L EGGY++T
Sbjct: 262 DPLGGMNITTKGFEDLTKIVLESADKICGGKVLSFLEGGYNLT 304
>gi|213408403|ref|XP_002174972.1| histone deacetylase clr3 [Schizosaccharomyces japonicus yFS275]
gi|212003019|gb|EEB08679.1| histone deacetylase clr3 [Schizosaccharomyces japonicus yFS275]
Length = 678
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 178/357 (49%), Gaps = 38/357 (10%)
Query: 44 LEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSG---IP---AQIPQLLSFHTPDYIN 96
L+ +E HPE+ RI + +K G +S + IP A + ++L H+ D +
Sbjct: 68 LDEVEDHPEDPRRILQVFEAIKEAGYVSAIPTARDAFIRIPSREATLEEILRVHSKDVYD 127
Query: 97 -----------ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
ELV +K D N ++ A LA G+ + V++G K A
Sbjct: 128 MVKSSETMSREELVNLEKTN-----DSLYFNNQTFFCARLASGSAVETCNAVVNGKVKNA 182
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAEGF 202
+A++RPPGHH++P + G+C NN + + + +V+++D DVH+GNGT F
Sbjct: 183 FAIIRPPGHHSEPNKSGGFCLFNNVAITARSMMARYPEQVKRVLILDWDVHHGNGTQMAF 242
Query: 203 YRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAM 260
Y VL ISLH +G + P G+ + GEGEG G +NIP P G D Y++A
Sbjct: 243 YDDPNVLYISLHRYENGRFYPG-TTYGSAENCGEGEGLGKTVNIPWPCAGMSDGDYIYAF 301
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
++V+P +F P+++++ G D++A DP G+ LT Y M +++ LA+ G+L
Sbjct: 302 QKVVMPIGYEFNPDLVIISAGFDAAAGDPLGQCYLTPAAYAHMTQMLLGLAE----GKLF 357
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
+ EGGY ++ + A + +L +P A L A P VK +E + + Q+
Sbjct: 358 VSMEGGYSLSSISTAGLAVAQTLLGIPPAKLHTVYATAP-----AVKTVEEVTRIQS 409
>gi|254467831|ref|ZP_05081237.1| histone deacetylase superfamily protein [beta proteobacterium KB13]
gi|207086641|gb|EDZ63924.1| histone deacetylase superfamily protein [beta proteobacterium KB13]
Length = 324
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 161/322 (50%), Gaps = 28/322 (8%)
Query: 13 AEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY 72
A+ + + +DD L H+TG G HPE +R+ ++++ LK P Y
Sbjct: 2 AKTPVAILYDDIFLEHNTGSG----------------HPERPERLFDVINTLKNNPDFKY 45
Query: 73 -ISWHSGIPAQIPQLLSFHTPDYI----NELVEADKAGGKMVCDG-TVLNPGSWGAALLA 126
+ W A ++ H+ YI NE+ D + G TV++P S A ++
Sbjct: 46 DLVWPKVRKASNSEIALAHSEKYIQLVENEIRALDNDSPTFLSTGDTVISPISLDVAQMS 105
Query: 127 VGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKV 185
VG +L + ++ G+ A++ RPPGHHA G+C N+A +A + L + ++
Sbjct: 106 VGASLVGIDEIMSGNVDAAFSFNRPPGHHATRDRGMGFCIYNHAAIAAKYLQMKYSLSRI 165
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNI 245
++ID DVH+GNGT + FY V S+H + P +P +G E G +G G+ N+
Sbjct: 166 LIIDFDVHHGNGTQDIFYDDPSVFYFSIHQH-----PFYPGSGRPSETGISDGEGFTYNV 220
Query: 246 PLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
+P G+GD ++ A + ++P ++ F+P I++ G D+ D G+ T GY ++
Sbjct: 221 EVPEGSGDERFIAAFKDDLLPKMKNFQPEFIIISAGFDAHKNDLLGKLKYTSSGYGKVAS 280
Query: 306 IVRSLADRYSGGRLLIVQEGGY 327
++ ++A + ++ + EGGY
Sbjct: 281 LINNIAFTSNSKGIMYMLEGGY 302
>gi|194289537|ref|YP_002005444.1| acetylpolyamine aminohydrolase, histone deacetylase superfamily
[Cupriavidus taiwanensis LMG 19424]
gi|193223372|emb|CAQ69377.1| Putative acetylpolyamine aminohydrolase, Histone deacetylase
superfamily [Cupriavidus taiwanensis LMG 19424]
Length = 357
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 135/231 (58%), Gaps = 13/231 (5%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVL---DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAG 171
L P SW A L + ++A +HV DG G +AYAL RP GHHA A G+C++NN+
Sbjct: 131 LGPDSWRAILRGAHSAVAAARHVCERQDGAG-MAYALCRPSGHHAHSDRAAGFCYVNNSA 189
Query: 172 LAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVD 231
+A Q L + GKV V+D+D H+G+GT + FY + V+TISLH + + P + G +
Sbjct: 190 IAAQTLL-ARFGKVAVLDVDAHHGDGTQQIFYHRSDVMTISLHADPADYYPFY--TGYAN 246
Query: 232 ELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNG 291
E G G G+GYNLN PL +G+GD ++ A+ + + A++ + P +VL +G D+ DP
Sbjct: 247 ERGYGAGYGYNLNFPLAHGSGDVEFLSAL-DGALDALRDYRPQAVVLALGFDTYENDPIS 305
Query: 292 RQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
++MDGYR +G + +L G ++VQEGGY V L A L G
Sbjct: 306 VLKVSMDGYRGIGERIHAL-----GLPTVVVQEGGYEVEAIGRGLDAFLAG 351
>gi|126180176|ref|YP_001048141.1| histone deacetylase superfamily protein [Methanoculleus marisnigri
JR1]
gi|125862970|gb|ABN58159.1| histone deacetylase superfamily [Methanoculleus marisnigri JR1]
Length = 322
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 138/255 (54%), Gaps = 16/255 (6%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG 106
+E HPE+ R++ +S I + W + + A L H P Y+ + E A G
Sbjct: 16 MEAHPESGARLRAALS-----GIPENVRWRAPVRATESDLQRVHDPRYVRWVRE--MATG 68
Query: 107 KMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
D T + S+ AA A G+T +A + L+G + +ALVRPPGHHA+P A G+C
Sbjct: 69 TCFLDVNTYVTCHSFDAASYAAGSTFAAAERTLEG--EHLFALVRPPGHHAEPDRAMGFC 126
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
NNA +A AL S +V ++D D+H+GNGT FY S++VL S+H + S P
Sbjct: 127 IFNNAAVAAAKALQS-VDRVAILDWDLHHGNGTQTAFYGSDRVLYCSVHEEN-----SFP 180
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
+ G VDE+G G G GY LN P+ G+ Y E+ VPAI +F P+++++ GQD
Sbjct: 181 KTGWVDEIGTGRGRGYTLNAPIAPGSTIADYALVFEEVFVPAITRFRPDVLIVSAGQDGL 240
Query: 286 AFDPNGRQCLTMDGY 300
A D +GR L D Y
Sbjct: 241 ADDEHGRMNLEPDDY 255
>gi|281360899|ref|NP_001162760.1| HDAC6, isoform D [Drosophila melanogaster]
gi|4455131|gb|AAD21090.1| histone deacetylase HDA2 [Drosophila melanogaster]
gi|272506112|gb|ACZ95295.1| HDAC6, isoform D [Drosophila melanogaster]
gi|384875351|gb|AFI26270.1| HDAC6 [Drosophila melanogaster]
Length = 883
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 478 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 537
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 538 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 595
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 596 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 655
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 656 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 714
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 715 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 770
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 771 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 807
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 24/318 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 48 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 107
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 108 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 167
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 168 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 227
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 228 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 285
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 286 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 334
Query: 337 HATLEGVLNLPLALLSDP 354
+ EG +LL DP
Sbjct: 335 DSLAEGAALTLRSLLGDP 352
>gi|451946710|ref|YP_007467305.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
gi|451906058|gb|AGF77652.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
Length = 354
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 157/310 (50%), Gaps = 11/310 (3%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPGF HPE+ R+K I +L + + + PA + H D I+ +
Sbjct: 16 DPGF-----DHPESPQRLKVINEVLDKEEVKDCFVYPDFEPASHDIIGLNHGKDLIDRVA 70
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
E + T +P S+ AA+LA G + + +++G +ALVRPPGHHA+
Sbjct: 71 ETAGKIFDALDPDTKTSPDSYAAAILAAGALVKGVDLLVEGAVDNGFALVRPPGHHAERD 130
Query: 160 MADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
+ G+C NN +A + A++ +V+++D D+H+GNGT FY S+ VL +S H
Sbjct: 131 RSMGFCLFNNVAVAAKYAISHHKMKRVMIVDWDLHHGNGTQNSFYDSDMVLYVSTHQY-- 188
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P +P G V E G+G+G GY +NIPLP GD Y +++VP +++ P +I++
Sbjct: 189 ---PYYPGTGAVTETGKGKGDGYTINIPLPGYQGDIDYATIFDDIIVPIGKEYNPELILI 245
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D DP G +T G+ + R + LA+ GRLL+ EGGY + A
Sbjct: 246 SCGFDIYKGDPLGAMEVTAPGFAYLTRAMVQLAETVCEGRLLVTLEGGYDLNGQRDGAMA 305
Query: 339 TLEGVLNLPL 348
L +L PL
Sbjct: 306 VLSELLGEPL 315
>gi|255982634|gb|ACU45748.1| AT13940p [Drosophila melanogaster]
Length = 1022
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 24/318 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGGMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDP 354
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDP 434
>gi|444369897|ref|ZP_21169602.1| histone deacetylase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443598379|gb|ELT66743.1| histone deacetylase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 247
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 126/237 (53%), Gaps = 10/237 (4%)
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHH G+C L N +A++ A G +V VID DVH+GNGT +Y L
Sbjct: 17 PPGHHCLRDRPMGFCMLANIPIAIEAARAKHGIERVAVIDWDVHHGNGTQSIYYDDPDTL 76
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
TISLH + P D+ GEG G G NLN+PL G+GD Y +A +V+PA+
Sbjct: 77 TISLHQDRCF----PPGYSGADDRGEGAGIGANLNVPLLAGSGDDAYRYAFERIVLPALA 132
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F P +IV+ G D+SA DP R L D YR M R V+ A R+ GGRL+IV EGGY
Sbjct: 133 RFRPELIVIASGLDASAVDPLARMQLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYSE 192
Query: 330 TYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLKGS 386
Y +C A +E + + ++DP+ D A + E +Q +++ L S
Sbjct: 193 AYVPFCGLAIVEELAGVRTE-VADPML----DLAIAQQPGERFVAFQRELLDELAAS 244
>gi|225579760|gb|ACN94043.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579913|gb|ACN94179.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579958|gb|ACN94219.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 133 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 192
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 193 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 252
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 253 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 312
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 313 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 370
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 371 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 419
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 420 DSLAEGAALTLRSLLGDPC 438
>gi|386764457|ref|NP_001245681.1| HDAC6, isoform F [Drosophila melanogaster]
gi|383293407|gb|AFH07395.1| HDAC6, isoform F [Drosophila melanogaster]
Length = 1022
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 24/318 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDP 354
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDP 434
>gi|225579832|gb|ACN94107.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 133 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 192
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 193 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGRAQNGMAIIRPPGHHAMKAE 252
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 253 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 312
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 313 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 370
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 371 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 419
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 420 DSLAEGAALTLRSLLGDPC 438
>gi|225579828|gb|ACN94103.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGRAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|225579758|gb|ACN94041.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579909|gb|ACN94175.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579954|gb|ACN94215.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|149174219|ref|ZP_01852846.1| histone deacetylase/AcuC/AphA family protein [Planctomyces maris
DSM 8797]
gi|148846764|gb|EDL61100.1| histone deacetylase/AcuC/AphA family protein [Planctomyces maris
DSM 8797]
Length = 310
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 154/310 (49%), Gaps = 18/310 (5%)
Query: 40 DPGFLEVLEKH-----PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDY 94
DP FL KH PEN+ RI + + + + S L H+ Y
Sbjct: 7 DPVFL----KHDTGDLPENATRILPAMRRASQIAMHAHCRQRSWNEVTDTVLERVHSQQY 62
Query: 95 INELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
I + E + GG + + TV+ S+G A AVG A++ ++ + A+ LVRPPGH
Sbjct: 63 IRFVKEFCEQGGGHISEDTVVCRESYGVARKAVGAVCDAVEQIVQDKAERAFCLVRPPGH 122
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HA P A G+C NN + +LA+ G +V+++D DVH+G+GT E F+ +V +S+
Sbjct: 123 HAAPESALGFCVFNNVAVGARLAIKELGLERVLIVDWDVHHGDGTQEIFWEDGQVGFLSI 182
Query: 214 HMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFE 272
H + S QN GT E G G+G G +N+P+ +GT Y T V +
Sbjct: 183 HRS------SFYQNTGTAAETGAGKGLGTTMNVPVESGTSREHYCELFTAAVEQMAARIR 236
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P ++++ G D+ DP G L + Y + R+V +A ++ GR++ V EGGY+
Sbjct: 237 PQLVLISAGFDAHKDDPIGSLGLESEDYARLTRVVLEIAKTHANGRVVSVLEGGYNPGAL 296
Query: 333 AYCL-HATLE 341
A C+ H LE
Sbjct: 297 AECIEHHLLE 306
>gi|385774025|ref|YP_005646592.1| histone deacetylase superfamily protein [Sulfolobus islandicus
HVE10/4]
gi|323478140|gb|ADX83378.1| histone deacetylase superfamily [Sulfolobus islandicus HVE10/4]
Length = 351
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 11/312 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HP S R +L+ +I+ P L H+ +YI + K G +
Sbjct: 21 HPFKSLRESMTKRLLEERSAFHFITLIEPKPISEEVLQLVHSKEYIEFVKYKSKEGQGYL 80
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFL 167
DG T G + AAL+ + ++ A++ ++ G G+ + + G HHA+ A G+C
Sbjct: 81 DDGDTPAFKGIYEAALIRISGSVKALE-LIKG-GEFNHGINIGGGFHHAKRNRAAGFCVF 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N+ L +L NS K+ ++DID H+ +GT E +KVL ISLHM H ++ P +
Sbjct: 139 NDVALIAKLGENS-FSKIAIVDIDGHHADGTQELLIDDDKVLKISLHMFHPNFFPG---S 194
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G V+E+G G+G GY +NIPLP GTGD GY+ A E+V+P I++++P +I+L+ G DS
Sbjct: 195 GDVNEIGVGKGEGYTINIPLPPGTGDDGYLLAFDEIVIPVIERYKPELIILITGGDSYFN 254
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH---ATLEGVL 344
DP L+ GY ++ V LA +YS RL+++ GGY+ +A A + G+
Sbjct: 255 DPLVELKLSTHGYLDVVTKVHHLAHKYSSVRLIMLGGGGYNYDATARIWTISIAEIAGIY 314
Query: 345 NLPLALLSDPIA 356
+L L DP +
Sbjct: 315 DLEYETLHDPFS 326
>gi|225579846|gb|ACN94119.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ +V++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRVLIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|384875349|gb|AFI26268.1| HDAC6 [Drosophila melanogaster]
Length = 1128
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|24642142|ref|NP_573017.2| HDAC6, isoform A [Drosophila melanogaster]
gi|22833159|gb|AAF48443.2| HDAC6, isoform A [Drosophila melanogaster]
gi|28557633|gb|AAO45222.1| LD43531p [Drosophila melanogaster]
gi|220947430|gb|ACL86258.1| HDAC6-PA [synthetic construct]
gi|225579765|gb|ACN94047.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579774|gb|ACN94055.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579792|gb|ACN94071.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579801|gb|ACN94079.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579837|gb|ACN94111.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579855|gb|ACN94127.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579864|gb|ACN94135.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579873|gb|ACN94143.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579882|gb|ACN94151.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579891|gb|ACN94159.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579900|gb|ACN94167.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579918|gb|ACN94183.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579927|gb|ACN94191.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579947|gb|ACN94209.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579963|gb|ACN94223.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|384875350|gb|AFI26269.1| HDAC6 [Drosophila melanogaster]
Length = 1138
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 133 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 192
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 193 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 252
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 253 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 312
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 313 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 370
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 371 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 419
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 420 DSLAEGAALTLRSLLGDPC 438
>gi|386764455|ref|NP_001245680.1| HDAC6, isoform E [Drosophila melanogaster]
gi|383293406|gb|AFH07394.1| HDAC6, isoform E [Drosophila melanogaster]
Length = 1108
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 533 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 592
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 593 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 650
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 651 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 710
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 711 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 769
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 770 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 825
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 826 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 862
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 103 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 162
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 163 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 222
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 223 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 282
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 283 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 340
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 341 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 389
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 390 DSLAEGAALTLRSLLGDPC 408
>gi|225579810|gb|ACN94087.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579819|gb|ACN94095.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGRAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|341894557|gb|EGT50492.1| hypothetical protein CAEBREN_16084 [Caenorhabditis brenneri]
Length = 1061
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 163/339 (48%), Gaps = 20/339 (5%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D + TG L GF+ E V + HPE+ RI++I +L + +
Sbjct: 1 MLFEDRQKSRTTGPTL--VGFNESQSEHHNTVCKDHPESPGRIQSIKEVLTKTKVLEKCQ 58
Query: 75 WHSGIPAQIPQLLSF-HTPDYINELVEADKAGGKMV---C---DGTVLNPGSWGAALLAV 127
+ LS H + I +L+E + + + C D + S AA V
Sbjct: 59 VVTDFLEIDDADLSITHEKEMIAKLMEIENKTQEEINKECEKFDSIYMTEKSQKAARDGV 118
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
++ +A++RPPGHHA G+C NNA A + A +G ++++
Sbjct: 119 ACVRELTNRIMANEASNGFAIIRPPGHHADRDNPSGFCIYNNASQAAEEAFFNGAERILI 178
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D+DVH+GNGT FY +VL S+H HG + P H + D +G G+G GYN N+P
Sbjct: 179 VDLDVHHGNGTQRMFYHDKRVLVFSIHRYEHGLYWP-HLRESNFDRIGSGQGIGYNANLP 237
Query: 247 L-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
L G D Y+ + +++P +F+P+ +++ G DS A DP G LT D Y
Sbjct: 238 LNEEGCTDSDYLSILFHVLLPLATQFDPHFVIVSAGFDSLAGDPLGGMLLTPDAYSHFIY 297
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
++SLA GR+L+V EGGY+ SA ++ +L
Sbjct: 298 HLKSLAQ----GRMLVVLEGGYNHQVSAVAAQKCIKVLL 332
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 18/315 (5%)
Query: 44 LEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPDYINELVEAD 102
LE ++HPE R + I+ LK G + + +S A ++ HT ++ L +
Sbjct: 448 LEEEDRHPEKPARTRRILKTLKESGVLDRCVERNSERSATDEEIRMVHTKKMLDHLKTTE 507
Query: 103 KAGGKMVCD-------GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALV--RPPG 153
+ + + L + A A+G L ++ + + + ALV RPPG
Sbjct: 508 SMKEEELMEEAQKEFNSIFLTQDTLKVARKAIGAVLQSVDEIFEKPAGLRNALVIVRPPG 567
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HHA + + G+C NN +A + A +V+++D DVH+GNGT E FY V+ +S
Sbjct: 568 HHASASKSSGFCIFNNVAVAAKYAQRRHKIKRVLILDWDVHHGNGTQEIFYEDGNVMYMS 627
Query: 213 LHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVHAMTELVVPAIQK 270
+H + G++ P D +GEG+G G +NIP GD Y A +V+P +
Sbjct: 628 IHRHDKGNFYPVGEPKDYFD-VGEGDGEGMTVNIPFSGAPMGDLEYQMAFQRVVLPIAYQ 686
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
F+P ++++ G D++ DP G +T + + M + SLA GR++ V EGGY++T
Sbjct: 687 FKPELVLISAGFDAAIDDPLGEYKVTPETFALMTYQLSSLA----SGRVITVLEGGYNLT 742
Query: 331 YSAYCLHATLEGVLN 345
+ A E + N
Sbjct: 743 SISNSALAVCEVLQN 757
>gi|341884216|gb|EGT40151.1| hypothetical protein CAEBREN_23214 [Caenorhabditis brenneri]
Length = 1054
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 163/339 (48%), Gaps = 20/339 (5%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D + TG L GF+ E V + HPE+ RI++I +L + +
Sbjct: 1 MLFEDRQKSRTTGPTL--VGFNESQSEHHNTVCKNHPESPGRIQSIKEVLTKTKVLEKCQ 58
Query: 75 WHSGIPAQIPQLLSF-HTPDYINELVEADKAGGKMV---C---DGTVLNPGSWGAALLAV 127
+ LS H + I +L+E + + + C D + S AA V
Sbjct: 59 VVTDFLEIDDADLSITHEKEMIAKLMEIENKTQEEINKECENFDSIYMTEKSQKAARDGV 118
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
++ +A++RPPGHHA G+C NNA A + A +G ++++
Sbjct: 119 ACVRELTNRIMANEASNGFAIIRPPGHHADRDNPSGFCIYNNASQAAEEAFFNGAERILI 178
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D+DVH+GNGT FY +VL S+H HG + P H + D +G G+G GYN N+P
Sbjct: 179 VDLDVHHGNGTQRMFYHDKRVLVFSIHRYEHGLYWP-HLRESNFDRIGSGQGIGYNANLP 237
Query: 247 L-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
L G D Y+ + +++P +F+P+ +++ G DS A DP G LT D Y
Sbjct: 238 LNEEGCTDSDYLSILFHVLLPLATQFDPHFVIVSAGFDSLAGDPLGGMLLTPDAYSHFIY 297
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
++SLA GR+L+V EGGY+ SA ++ +L
Sbjct: 298 HLKSLAQ----GRMLVVLEGGYNHQVSAVAAQKCIKVLL 332
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 18/315 (5%)
Query: 44 LEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPDYINELVEAD 102
LE ++HPE R + I+ LK G + + +S A ++ HT ++ L +
Sbjct: 441 LEEEDRHPEKPARTRRILKTLKESGVLDRCVERNSERSATDEEIRMVHTKKMLDHLKTTE 500
Query: 103 KAGGKMVCD-------GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALV--RPPG 153
+ + + L + A A+G L ++ + + + ALV RPPG
Sbjct: 501 SMKEEELMEEAQKEFNSIFLTQDTLKVARKAIGAVLQSVDEIFEKPAGLRNALVIVRPPG 560
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HHA + + G+C NN +A + A +V+++D DVH+GNGT E FY V+ +S
Sbjct: 561 HHASASKSSGFCIFNNVAVAAKYAQRRHKIKRVLILDWDVHHGNGTQEIFYEDGNVMYMS 620
Query: 213 LHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVHAMTELVVPAIQK 270
+H + G++ P D +GEG+G G +NIP GD Y A +V+P +
Sbjct: 621 IHRHDKGNFYPVGEPKDYFD-VGEGDGEGMTVNIPFSGAPMGDLEYQMAFQRVVLPIAYQ 679
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
F+P ++++ G D++ DP G +T + + M + SLA GR++ V EGGY++T
Sbjct: 680 FKPELVLISAGFDAAIDDPLGEYKVTPETFALMTYQLSSLA----SGRIITVLEGGYNLT 735
Query: 331 YSAYCLHATLEGVLN 345
+ A E + N
Sbjct: 736 SISNSALAVCEVLQN 750
>gi|225579936|gb|ACN94199.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFQHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|195604786|gb|ACG24223.1| histone deacetylase 6 [Zea mays]
Length = 701
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 188/385 (48%), Gaps = 44/385 (11%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
++ + +D+ M H T G ++HPEN +R+++I L ++
Sbjct: 14 LVGLLYDERMCAHATPDG--------------KEHPENPERLRSIWRKLNAAGVASRCVA 59
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEA-----DKAGGKMV--CDGTVLNPGSWGAALLAVG 128
A+ + S H+ +I + E D + K+ + N GS +A+LA G
Sbjct: 60 LKAKEAEDKYIASVHSKRHIKLMKEISSTIYDASRNKIARKFNSIYFNKGSSESAVLAAG 119
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V G A ALVRPPGHHA+ A G+C NN +A LN G K
Sbjct: 120 SVIEVAEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKK 179
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDE--LGEGEGFGYN 242
++++D DVH+GNGT + FY +VL S+H +G +P G +GE G GYN
Sbjct: 180 ILIVDWDVHHGNGTQKMFYDDPRVLFFSVH--RFDYGSFYPAEGDASHCFIGEEAGKGYN 237
Query: 243 LNIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYR 301
+N+P +G GD Y+ A +++P + F+P++I++ G D++ DP G C+T +GY
Sbjct: 238 INVPWEHGKCGDADYIAAWDHVLLPVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYA 297
Query: 302 EMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAY-YPE 360
+ + + L ++ GR+++ EGGY++ A ++A + LL D + PE
Sbjct: 298 LL--LTKLLG--FAQGRIVMALEGGYNLRSIANSVYACAK-------VLLGDKFTFNTPE 346
Query: 361 DEAFPV--KVIESIKQYQNDVIPFL 383
+ F +VI++++ P L
Sbjct: 347 MQPFESTWRVIQAVRNELKTCWPVL 371
>gi|24642146|ref|NP_727843.1| HDAC6, isoform C [Drosophila melanogaster]
gi|22833161|gb|AAN09662.1| HDAC6, isoform C [Drosophila melanogaster]
gi|225579769|gb|ACN94051.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579778|gb|ACN94059.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579796|gb|ACN94075.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579805|gb|ACN94083.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579841|gb|ACN94115.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579859|gb|ACN94131.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579868|gb|ACN94139.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579877|gb|ACN94147.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579886|gb|ACN94155.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579895|gb|ACN94163.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579904|gb|ACN94171.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579922|gb|ACN94187.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579931|gb|ACN94195.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579949|gb|ACN94211.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579967|gb|ACN94227.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 133 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 192
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 193 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 252
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 253 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 312
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 313 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 370
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 371 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 419
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 420 DSLAEGAALTLRSLLGDPC 438
>gi|225579814|gb|ACN94091.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579823|gb|ACN94099.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 133 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 192
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 193 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGRAQNGMAIIRPPGHHAMKAE 252
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 253 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 312
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 313 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 370
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 371 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 419
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 420 DSLAEGAALTLRSLLGDPC 438
>gi|357160621|ref|XP_003578822.1| PREDICTED: histone deacetylase 14-like [Brachypodium distachyon]
Length = 444
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 31/353 (8%)
Query: 48 EKHPENSDRIKNIVSILKRGPISP------YISWHSGIPAQIPQLLSFHTPDYINELVEA 101
E HPE++ R+ IV L++ ++P + + PA + + H+ YI L
Sbjct: 99 ESHPESNKRVPAIVDALEKLELTPKHRGSQVLEIQNFHPASLDDVARVHSRKYITGL--- 155
Query: 102 DKAGGKMVCDGTVLNPGS---------WGAALLAVGTTLSAMKHVLDGHG-----KIAYA 147
+KA + +G + G+ + +LLA G ++ + V+ + +A
Sbjct: 156 EKAMSRASDEGLIFIEGTGPTYATQTTFQESLLAAGAGITLVDSVVAASKLGPSPPLGFA 215
Query: 148 LVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSN 206
LVRPPGHHA P G+C N +A + A + G +V++ID DVH+GNGT + FY
Sbjct: 216 LVRPPGHHAVPEGPMGFCVFGNIAVAARYAQHQHGLKRVMIIDFDVHHGNGTCDAFYDDP 275
Query: 207 KVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVP 266
+ +S H S+P G ++ +G+G G LN+PLP G+GD A E++ P
Sbjct: 276 DIFFLSTHQLG-----SYPGTGKMNLIGQGSSEGTTLNLPLPGGSGDYSMRCAFDEVIAP 330
Query: 267 AIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGG 326
+ Q+F+P++I++ G D+ A DP T Y + ++ LA GGR + EGG
Sbjct: 331 SAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTYYTLASSIKQLAGDLCGGRCVFFLEGG 390
Query: 327 YHVTYSAYCLHATLEGVLNLP--LALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
Y++ + + T L+ P A +P Y E + IE ++ +
Sbjct: 391 YNLQSLSSSVADTFRAFLDEPSLAAQFDNPAMLYEEPTRRVKEAIEKVRHLHS 443
>gi|225579850|gb|ACN94123.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 133 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 192
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 193 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 252
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ +V++ID DVH+G GT FY +V+ S+H HG
Sbjct: 253 YNGYCFFNNVALATQHALDVHKLQRVLIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 312
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 313 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 370
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 371 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 419
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 420 DSLAEGAALTLRSLLGDPC 438
>gi|448350484|ref|ZP_21539297.1| histone deacetylase [Natrialba taiwanensis DSM 12281]
gi|445636754|gb|ELY89914.1| histone deacetylase [Natrialba taiwanensis DSM 12281]
Length = 341
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 165/343 (48%), Gaps = 33/343 (9%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+SDR++ I LK+ Y+ G P + ++ + H Y+ +
Sbjct: 13 DPG-----SRHPESSDRLRAIRERLKKKHGVAYVE---GDPCSLDEIAAVHDRAYVESVE 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
GG T +W A + G A+ L G + +++ RPPGHHA
Sbjct: 65 SFCADGGGNWDPDTTAVEDTWDAIRYSAGQACWAVDAALSGETGRQTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NN +A Q AL+ +V ++D DVH+GNGT + FY + V +S+H
Sbjct: 125 TDDAMGFCFVNNVAVAAQHALDHDDYDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSIH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G +DE G G+ G +NIP+P GT D GY+ A+ + A++ F P+
Sbjct: 185 EQ-----GLYPGTGDIDETGAGDATGTTMNIPMPAGTDDAGYLAAVDGPIAAALESFNPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y + +R+LA + L V EGGY +
Sbjct: 240 LLLVSAGFDAHRHDPISRIRLSTEAYALLADRLRTLA-ADTDASLAFVLEGGYGLDVLAD 298
Query: 332 SAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
S +H T +G DPI P+D+ +V+ ++
Sbjct: 299 SVSIVHETFDG---------RDPI--QPDDDELDEQVVSVLED 330
>gi|225579759|gb|ACN94042.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579912|gb|ACN94178.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579957|gb|ACN94218.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDPC 435
>gi|442616414|ref|NP_001259569.1| HDAC6, isoform G [Drosophila melanogaster]
gi|440216793|gb|AGB95411.1| HDAC6, isoform G [Drosophila melanogaster]
Length = 1179
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 553 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 612
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 613 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 670
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 671 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 730
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 731 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 789
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 790 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 845
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 846 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 882
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 123 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 182
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 183 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 242
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 243 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 302
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 303 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 360
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 361 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 409
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 410 DSLAEGAALTLRSLLGDPC 428
>gi|225579940|gb|ACN94203.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 563 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 622
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 623 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 680
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 681 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 740
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 741 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 799
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 800 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 855
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 856 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 892
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 133 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 192
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 193 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 252
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 253 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFQHG 312
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 313 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 370
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 371 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 419
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 420 DSLAEGAALTLRSLLGDPC 438
>gi|225579831|gb|ACN94106.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGRAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDPC 435
>gi|53803335|ref|YP_114898.1| histone deacetylase/AcuC/AphA family protein [Methylococcus
capsulatus str. Bath]
gi|53757096|gb|AAU91387.1| histone deacetylase/AcuC/AphA family protein [Methylococcus
capsulatus str. Bath]
Length = 310
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 148/305 (48%), Gaps = 28/305 (9%)
Query: 25 MLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIP 84
L HDTG G HPE S R+ I S L P + A I
Sbjct: 11 FLRHDTGPG----------------HPEGSVRLAAIESALA-APEFRSLRRLEAPRADIS 53
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
+L H+ +I + + G D TV++P S AAL AVG A+ V+ +
Sbjct: 54 RLELVHSRRHIERVFASLPQTGHHFVDADTVVSPESGEAALHAVGAVCLAVDEVIGKRAR 113
Query: 144 IAYALVRPPGHHAQPTMADGYC-FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGF 202
A+ VRPPGHHA+P A G+C F N A A N G ++ ++D DVH+GNGT F
Sbjct: 114 NAFCAVRPPGHHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDVHHGNGTQAAF 173
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTE 262
R+ +VL +S H P +P G+ +E G G +NIPLP GT Y A+T
Sbjct: 174 RRNPQVLYVSTHQY-----PWYPGTGSAEE----TGVGNLVNIPLPAGTDSAAYREAVTA 224
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
+PAI +F P ++++ G D+ DP LT D Y + + LADR+SGGR++
Sbjct: 225 TALPAIDRFRPELVLISAGFDAHRDDPLADLALTEDDYGWITAELMKLADRHSGGRIVSA 284
Query: 323 QEGGY 327
EGGY
Sbjct: 285 LEGGY 289
>gi|417750432|ref|ZP_12398794.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mycobacterium avium subsp. paratuberculosis S397]
gi|336457999|gb|EGO36986.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mycobacterium avium subsp. paratuberculosis S397]
Length = 309
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 137/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVAAALSR-PGFDALVRETAEPAELAATRYVHSNRYVDALEAARPQHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLQAVDRVLAGDVQNAFVACRPPGHHAETERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A T+ VPA+Q F P +I++ G ++
Sbjct: 194 TGAAAETGVGNIF----NSPLAPGDGGAELRAAFTDRFVPALQAFSPELIIVSAGFNAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A++ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFGWVTRELMKSAEKLCDGRLVAVLEGGY 290
>gi|384875348|gb|AFI26267.1| HDAC6 [Drosophila melanogaster]
Length = 1135
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDPC 435
>gi|225579849|gb|ACN94122.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ +V++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRVLIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDPC 435
>gi|24642144|ref|NP_727842.1| HDAC6, isoform B [Drosophila melanogaster]
gi|22833160|gb|AAN09661.1| HDAC6, isoform B [Drosophila melanogaster]
gi|225579768|gb|ACN94050.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579777|gb|ACN94058.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579795|gb|ACN94074.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579804|gb|ACN94082.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579840|gb|ACN94114.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579858|gb|ACN94130.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579867|gb|ACN94138.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579876|gb|ACN94146.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579885|gb|ACN94154.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579894|gb|ACN94162.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579903|gb|ACN94170.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579921|gb|ACN94186.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579930|gb|ACN94194.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579948|gb|ACN94210.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579966|gb|ACN94226.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDPC 435
>gi|444316756|ref|XP_004179035.1| hypothetical protein TBLA_0B06950 [Tetrapisispora blattae CBS 6284]
gi|387512075|emb|CCH59516.1| hypothetical protein TBLA_0B06950 [Tetrapisispora blattae CBS 6284]
Length = 795
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 183/358 (51%), Gaps = 31/358 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S I A + ++L
Sbjct: 76 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDNIGDLMLKLPIREATMNEILEV 135
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ ++ L + + + D N S+ +A L+ G + A K V++G K
Sbjct: 136 HSIEHFKYLEKTSNDNREQLLKETENGDSVYFNNDSFQSAKLSCGGAIEACKAVVEGRVK 195
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A+VRPPGHH++P A G+C +N +A + L + KV+++D D+H+GNGT +
Sbjct: 196 NAMAVVRPPGHHSEPESAGGFCLFSNVAVATKNILKNYPESVRKVLILDWDIHHGNGTQK 255
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVH 258
FY + VL ISLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 256 AFYNDDNVLYISLHRFELGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPIGAVGDAEYMW 314
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ ++ Y M +++SLA G
Sbjct: 315 AFEQVVMPMSREFQPDLVIISSGFDAADGDTIGQCHVSPSCYGHMTHMLKSLA----RGN 370
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP+ P+ E +++I+ I + Q
Sbjct: 371 LCVVLEGGYNLDAIARSALSVSKILIGEPPDELPDPLK-DPKPEV--IEMIDKIIRLQ 425
>gi|225579939|gb|ACN94202.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFQHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDPC 435
>gi|225579813|gb|ACN94090.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579822|gb|ACN94098.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 21/338 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI++I + + + S A ++ HT ++N E E
Sbjct: 560 HPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKEL 619
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
A G + + L+P ++ A LA G L A+ VL G + VRPPGHHA+
Sbjct: 620 HDAAG--IYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 677
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 678 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 737
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 738 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLV 796
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 797 SAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 852
Query: 339 TLEGVLN--LPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ +L +P L P AF +ES++Q
Sbjct: 853 CTKTLLGDPVPTPQLGATALQKPPTVAFQ-SCVESLQQ 889
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 130 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 189
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 190 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGRAQNGMAIIRPPGHHAMKAE 249
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 250 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 309
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 310 SFWP-HLHESDYHAIGSGAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 367
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 368 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 416
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 417 DSLAEGAALTLRSLLGDPC 435
>gi|395646848|ref|ZP_10434708.1| histone deacetylase superfamily [Methanofollis liminatans DSM 4140]
gi|395443588|gb|EJG08345.1| histone deacetylase superfamily [Methanofollis liminatans DSM 4140]
Length = 327
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 143/256 (55%), Gaps = 16/256 (6%)
Query: 52 ENSDRIKNIVSILKRG-PISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
E S R++ +++ L R P+ P +S A + ++ + H P Y+ ++ G +
Sbjct: 26 ETSARLREVLAGLPRDIPVHPPVS------ATVEEIEAVHDPAYVR-WIQKMATGSCFLD 78
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D T ++ S+ AL A G+T +A++ LDG +ALVRPPGHHA+P G+C NNA
Sbjct: 79 DNTYVSDSSFEVALAAAGSTHAAIERALDGEN--CFALVRPPGHHAEPDRQMGFCIFNNA 136
Query: 171 GLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTV 230
+AV AL G +V ++D D+H+GNGT + FY S++VL S+H + S P G
Sbjct: 137 AVAVTKALR-GLDRVAIVDWDLHHGNGTQKIFYPSDRVLYCSIHQEN-----SFPGTGWP 190
Query: 231 DELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPN 290
+E+G G+G GY +N PL G Y + + VPAI+ P+++++ GQD+ A D +
Sbjct: 191 EEIGTGKGRGYTINAPLAPGATLADYARIFSAVFVPAIRAHRPDLVLVSAGQDALADDEH 250
Query: 291 GRQCLTMDGYREMGRI 306
GR L+ Y + R+
Sbjct: 251 GRMLLSPPDYGVLTRM 266
>gi|284043321|ref|YP_003393661.1| histone deacetylase [Conexibacter woesei DSM 14684]
gi|283947542|gb|ADB50286.1| Histone deacetylase [Conexibacter woesei DSM 14684]
Length = 341
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 148/282 (52%), Gaps = 14/282 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE + RI I L+R + I Q L + H YI + E AGG +
Sbjct: 20 HPERAARIIAIEQELERRGWLGLERLEAPI-VQESTLAAVHPVRYIRAIDELCAAGGGAI 78
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
TV+ GS+ AAL A G + + +L G + ++ +RPPGHHA+ A G+C N
Sbjct: 79 DADTVVVEGSYEAALRAAGGAVRLVDLLLGGGARTGFSALRPPGHHAEAARAMGFCLFGN 138
Query: 170 AGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A + AL++ G +V+V+D DVH+GNGT + F+ +++VL +SLH + P +P G
Sbjct: 139 VAVAARHALDAHGAERVLVLDWDVHHGNGTNDIFHATDEVLFVSLHES-----PLYPGTG 193
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
V ++G G G GY +N+P+ GTGD Y + +VVP + +EP +I+L G D+ D
Sbjct: 194 PVGDVGSGRGTGYTVNVPVAAGTGDATYASLLEHVVVPLARAYEPRLILLSAGFDAHRDD 253
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYS---GGRLLIVQEGGY 327
P L+ G+ M +R LA GG V EGGY
Sbjct: 254 PLAGVRLSEGGFAAMTGTIRRLAAELEVPVGG----VLEGGY 291
>gi|168012186|ref|XP_001758783.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162689920|gb|EDQ76289.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 577
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 160/312 (51%), Gaps = 21/312 (6%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGG 106
+ HPE RI +I LK + A +L + HT D+I+ + E K+ G
Sbjct: 22 DDHPEQPARITSIYQRLKAEGVVDRCVQVDAREATPAELSTVHTEDHISLMQELGHKSFG 81
Query: 107 KM-------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
K D N GS AALLA G+ + V +G ++RPPGHHA+
Sbjct: 82 KKKRRRLQETFDSIYFNEGSAVAALLAAGSVIEVATQVAEGKLASGACVIRPPGHHAEAD 141
Query: 160 MADGYCFLNNAGLAVQLALNS----GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH- 214
G+C LNN +A + + G KV+++D DVH+GNGT F+ +V+ S+H
Sbjct: 142 RPMGFCLLNNVAVAAHILAHEKTELGVKKVLIVDWDVHHGNGTQHMFWTDPQVMYFSVHR 201
Query: 215 MNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFE 272
+ G + P P N G E+G EG GYN+N+P PN GD Y+ +++P ++F
Sbjct: 202 FDQGRFYP--PGNDGNCTEVGGEEGKGYNINVPWPNKDYGDADYLAVWKYILMPVARQFN 259
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P+++++ G DS+ DP GR +T GY +M R + LA+ GR+++ EGGY++T
Sbjct: 260 PDIVLISAGFDSARGDPLGRCNVTPGGYFQMTRQLMELAN----GRVVLALEGGYNLTSI 315
Query: 333 AYCLHATLEGVL 344
+ A ++ +L
Sbjct: 316 SESYLACMQAML 327
>gi|451845968|gb|EMD59279.1| hypothetical protein COCSADRAFT_41143 [Cochliobolus sativus ND90Pr]
Length = 842
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 182/347 (52%), Gaps = 31/347 (8%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYIS--------WH-SGIPAQIPQLLSFHTPDYINELV 99
HPE+ RI +I LK+ G ++ S W + A P++L HT ++ + LV
Sbjct: 141 HPEDPRRIHSIFEELKQAGLVASSTSEEDKEDHCWRIAARFATRPEILLIHTEEHYD-LV 199
Query: 100 EA-------DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPP 152
E+ + D LN ++ A LA G + A K V+ G + A A++RPP
Sbjct: 200 ESFQNMTSDELKFEAERLDSIYLNNSTYECAKLAAGGAIEACKAVVQGAVRNAIAIIRPP 259
Query: 153 GHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
GHHA+ G+C NN +A ++ N+ C KV+++D DVH+GNG FY VL
Sbjct: 260 GHHAESDQPSGFCIFNNVPIAARVCQNAYPETCRKVLILDWDVHHGNGIQHAFYDDPNVL 319
Query: 210 TISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPA 267
ISLH+ G++ P+ P +G +D GEG G G N+NIP +G GD Y++A ++V+P
Sbjct: 320 YISLHVFKDGTFYPNLP-DGNLDYCGEGRGEGKNVNIPWAEHGMGDSEYLYAFQQVVMPI 378
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+F P+++++ G D++ D G +T Y M ++ SLA G+L++ EGGY
Sbjct: 379 ATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHMLMSLA----KGKLVVCLEGGY 434
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
++ A A + ++ P L D + P+D A V ++E++K+
Sbjct: 435 NLRSIARSALAVTKVLMLEPPDRLRDDLP-APKDSA--VYIVENVKR 478
>gi|448721111|ref|ZP_21703694.1| histone deacetylase superfamily protein [Halobiforma
nitratireducens JCM 10879]
gi|445779682|gb|EMA30599.1| histone deacetylase superfamily protein [Halobiforma
nitratireducens JCM 10879]
Length = 360
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 17/302 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE DR++ I LKR Y+ P + S H Y+ ++ E GG
Sbjct: 17 RHPETPDRLRAIRERLKRKHGVEYVE---ADPVGFDDIASVHDRSYVEDVEEFCAEGGGN 73
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCF 166
T +W A + G A++ L+G+ + +++ RPPGHHA A G+CF
Sbjct: 74 WDPDTTAVEETWDAIRYSAGQATWAIEQALEGNTGRETPFSIGRPPGHHAVVDDAMGFCF 133
Query: 167 LNNAGLAVQLALNSGC---GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+NN +A Q AL +V ++D DVH+GNGT + FY V +S+H
Sbjct: 134 VNNVAVAAQQALEDDAYDVDRVAIVDWDVHHGNGTQDIFYDREDVFFVSIHEK-----GL 188
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G +DE GEG+G +N+P+P GT D Y+ A+ + A++ ++P+++++ G D
Sbjct: 189 YPGTGQIDESGEGDGERTTMNLPMPAGTDDVDYLAAVEGPIATALEAYDPDLLIVSAGFD 248
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHATL 340
+ DP R L+ + Y + +R LADR + L V EGGY + S +H T
Sbjct: 249 AHRHDPISRIRLSTEAYALLTDRLRGLADR-TDAALAFVLEGGYGLDVLADSVSIVHETF 307
Query: 341 EG 342
+G
Sbjct: 308 DG 309
>gi|91762404|ref|ZP_01264369.1| histone deacetylase family protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718206|gb|EAS84856.1| histone deacetylase family protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 309
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 149/303 (49%), Gaps = 28/303 (9%)
Query: 27 NHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQL 86
NH+TG G HPE DR+ ++ K+ + W L
Sbjct: 13 NHNTGDG----------------HPEKIDRVTVVIDNFKKLDNKDLV-WKKPSKFDRSLL 55
Query: 87 LSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
H DYIN + ++ G DG T+++PGS A AVG+ ++A+ V + K A
Sbjct: 56 EITHNSDYINFVEKSFPEKGLSFLDGDTIVSPGSKDATSDAVGSIITAIDGVQNKDFKNA 115
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYR 204
+ VRPPGHHA+ A G+C NN + +N K+ +ID DVH+GNGT + FY
Sbjct: 116 FCAVRPPGHHAEKNKAMGFCIYNNVAVGANYLINKYKLKKIAIIDFDVHHGNGTQDIFYD 175
Query: 205 SNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
+ KVL IS H P +P +GT DE G+ LNIPLP GT Y++A E V
Sbjct: 176 NEKVLYISTHQY-----PYYPGSGTKDEKGKHNNI---LNIPLPAGTTSEEYLNAY-EFV 226
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
+ I++F+P I+L G D+ DP + L + + + L+ +Y G+++ + E
Sbjct: 227 LNKIKEFKPEFILLSAGFDAHKDDPLAQLQLESKDFYSITKRTLELSKQYCDGKVVSILE 286
Query: 325 GGY 327
GGY
Sbjct: 287 GGY 289
>gi|124383761|ref|YP_001029271.1| histone deacetylase [Burkholderia mallei NCTC 10229]
gi|254358181|ref|ZP_04974454.1| histone deacetylase family protein [Burkholderia mallei 2002721280]
gi|124291781|gb|ABN01050.1| histone deacetylase family protein [Burkholderia mallei NCTC 10229]
gi|148027308|gb|EDK85329.1| histone deacetylase family protein [Burkholderia mallei 2002721280]
Length = 367
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 7/298 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAAADDDLRRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 214 GADE--RGAGAGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 271
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 272 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 329
>gi|374287612|ref|YP_005034697.1| putative acetylpolyamine aminohydrolase [Bacteriovorax marinus SJ]
gi|301166153|emb|CBW25728.1| putative acetylpolyamine aminohydrolase [Bacteriovorax marinus SJ]
Length = 343
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 154/308 (50%), Gaps = 42/308 (13%)
Query: 49 KHPENSDRIKNIVSILK------------RGPISPYISWHS-------GIPAQIPQLLSF 89
KHPE++ R ++I +K R P++ + HS A +P +F
Sbjct: 32 KHPESTKRAESIFKAIKSHKELFDLKEPERIPLASIRANHSYELVTLYNSAASLPDGQAF 91
Query: 90 H----------TPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
+ PD N AG GT L+ +W AA + + +A + +
Sbjct: 92 YPSVFPDKKKSRPDPTN----IKHAGFYCFDSGTPLDSKTWLAASWSAASAYAAGEEIYK 147
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTA 199
G +AYA+ RPPGHHA GYC+ NNA + +L G +VV++DID H+GNGT
Sbjct: 148 GRSSVAYAISRPPGHHASKDSYGGYCYFNNAAIVAKLLKKKG--RVVILDIDFHHGNGTQ 205
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHA 259
E FY+ +KVLTIS+H + + P G E+G G+G GYNLN+ LP T Y A
Sbjct: 206 EVFYKDDKVLTISIHGDPRDYFPFF--WGFSSEIGAGKGEGYNLNVILPPKTKFPAYKKA 263
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+ E V P I++FEP+ ++L G D+ DP G L + ++G+++ SL
Sbjct: 264 LLETVFPTIKRFEPDYLILSAGFDTYKLDPVGDFLLETSDFEKIGKLISSL-----DLPT 318
Query: 320 LIVQEGGY 327
+++QEGGY
Sbjct: 319 VVLQEGGY 326
>gi|328717398|ref|XP_001942814.2| PREDICTED: histone deacetylase 6-like [Acyrthosiphon pisum]
Length = 733
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 174/342 (50%), Gaps = 36/342 (10%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKR----GPISPYIS 74
V +DD + H K L+D E + EN R +S+L R G I+ I
Sbjct: 4 VVYDDNFITH---KCLWD-----------ENYSENPQRY---ISVLDRCNSLGLINRCIK 46
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVG 128
S A +LLS HT ++I+ L + + + D ++ ++ +LLA G
Sbjct: 47 ISSR-QATKEELLSKHTVEHIDLLESTEHYNDEKLEKFSSRYDSIYVHNSTYRQSLLAAG 105
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVV 187
+++ +K V+DG + A VRPPGHHA + GYCF+NN +A Q L+ + K+++
Sbjct: 106 SSIELVKAVVDGRIQNGMAFVRPPGHHAMESEYSGYCFINNVAIATQYLLDKTAIQKILI 165
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D D+H+G T + FY +VL S+H HG + P+ + D +G G G G+N+N+P
Sbjct: 166 VDWDIHHGQATQQMFYEDPRVLYFSIHRYEHGQFWPN-LRESDFDHVGNGSGTGFNVNVP 224
Query: 247 LPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
L + G + Y+ + L++P +F P++I++ G DS+ DP G +T Y + +
Sbjct: 225 LNDTGMKNEDYMAIIHYLLIPLATEFSPDLIIVSSGYDSAIGDPKGEMLVTPACYAHITQ 284
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
+ SL S GR++ + EGGY++ A TL +L P
Sbjct: 285 KLMSL----SCGRVVAILEGGYYLKSLAESAALTLRALLGDP 322
>gi|339238167|ref|XP_003380638.1| histone deacetylase family protein [Trichinella spiralis]
gi|316976487|gb|EFV59780.1| histone deacetylase family protein [Trichinella spiralis]
Length = 900
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 171/324 (52%), Gaps = 17/324 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E +R+ +I+ + + + + A + ++ FH+ DY+ ++ + G + +
Sbjct: 60 HIETPERLSSILDLCDQQGLFDRMKKIPSRLASLDEIELFHSKDYVQQVASFESMGAEEL 119
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D S+ AA LAVG+ L+A + VL A ALVRPPGHHA A+G
Sbjct: 120 QKASSTYDSVYACQHSFTAARLAVGSLLNATEAVLMKRCVNAIALVRPPGHHAMLDAANG 179
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH-GSWG 221
+C NN G+A ALN+ +++++D DVHYG G + F S ++L +S+H + GS+
Sbjct: 180 FCLFNNVGIAAAHALNAFRLDRILIVDWDVHYGQGIQQKFINSKQILCVSIHRHEFGSFW 239
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P P++ + +G+ +G G+N+N+PL G GD Y+ +++P +F+P +I++
Sbjct: 240 PHMPESDW-NNVGQDDGLGFNVNVPLNVRGLGDADYLAIFHHILLPLAIEFQPQLILVSA 298
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D++ P G L+ + +++ S+A GRL+I EGGY + ++ + +
Sbjct: 299 GFDAAVGCPEGEMLLSPRIFAHFTKMLASVA----AGRLVISLEGGYCIPSLSWSVSCVV 354
Query: 341 EGVLNLP---LALLSDPIAYYPED 361
+LN P LA L+ P+ Y D
Sbjct: 355 RALLNDPIPKLAGLNVPVNPYVVD 378
>gi|195953018|ref|YP_002121308.1| histone deacetylase superfamily [Hydrogenobaculum sp. Y04AAS1]
gi|195932630|gb|ACG57330.1| histone deacetylase superfamily [Hydrogenobaculum sp. Y04AAS1]
Length = 379
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 174/348 (50%), Gaps = 34/348 (9%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG- 106
+ HP R+ +++ LK + + + G A I +LL FHT DYI+ L+EAD+
Sbjct: 17 KNHPLRVPRVSLMINYLK--ALGFDVDYLEGRDASIEELLIFHTKDYIDALIEADRMMKA 74
Query: 107 -----KMVCDGTVLNP---GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG---HH 155
+ GT+ NP G W +LLA G+++ A++ + + + P HH
Sbjct: 75 TNYIREKYAIGTIENPVSAGMWKGSLLATGSSVQAVEFYIKNYKTENEIVAFNPAGGMHH 134
Query: 156 AQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A + A+G+CFLN+ +++ G K++ ID+D H+ +G E FY S V ISLH
Sbjct: 135 AMKSRANGFCFLNDPVISILHLQKHGFKKIMYIDLDAHHPDGVQEAFYNSADVFLISLHQ 194
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+ P H G DELGEGEGFG+N+NIPLP D ++HA+ + + A +KF P++
Sbjct: 195 SPEYAFPFHV--GYADELGEGEGFGFNMNIPLPKEINDNDFLHALEKAIEIATKKFTPDV 252
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH-----VT 330
V+ +G D+ D + L+ + Y + I++ ++ +++ GGY+
Sbjct: 253 FVVQMGVDAVKEDYLSKFNLSNNIYIKAIDIIKQYTKKF-----ILLGGGGYNPISLARA 307
Query: 331 YSAYCLHATLEGV------LNLPLALLSDPIAYYPEDEAFPVKVIESI 372
+S LH LEG+ + +L + I Y DE ++ SI
Sbjct: 308 WSLIWLH--LEGIDVKSIKVTKEAKMLLESIDYEDFDEIMEPQIYTSI 353
>gi|337287362|ref|YP_004626835.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
gi|335360190|gb|AEH45871.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
Length = 322
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 6/299 (2%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPEN R++ I+ LK G + + + PA + + H +Y+ EA G
Sbjct: 21 QHPENPKRLEVIIQRLKEGILGQIVEFFEPDPAPLEWVKEVHDINYLLRFEEACLRGRSF 80
Query: 109 VC-DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+C + ++ A LA G + A++ V G K + VRPPGHHA+ A G+CFL
Sbjct: 81 ICGKENEICYDTYEIAFLAAGAVIDAVELVEKGE-KFIFCPVRPPGHHAESYTALGFCFL 139
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN +A + ++++ID D H+GNG FY ++V IS+H N S P
Sbjct: 140 NNIAIAARYWQKKYGRRIMIIDWDAHHGNGIQNIFYEDDQVFYISIHENPRF---SFPGT 196
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G +E G G G GY LNIPLP +GD +V A E + P +++F+P+ +++ G D+
Sbjct: 197 GLAEERGRGRGEGYTLNIPLPLDSGDVQFVDAFIEQIEPVVKEFKPDGLIIAAGFDAHQD 256
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
D +T G+ E+ IVRS + + ++ V EGGY++ C+ L+ +L++
Sbjct: 257 DDMAYLNVTTAGFAEVSEIVRSWREEFDFP-VISVLEGGYNLEILPTCVAVHLKAMLDI 314
>gi|422002105|ref|ZP_16349343.1| histone deacetylase [Leptospira santarosai serovar Shermani str. LT
821]
gi|417259037|gb|EKT88416.1| histone deacetylase [Leptospira santarosai serovar Shermani str. LT
821]
Length = 313
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 145/283 (51%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H E+SDR+ ++ L + S + +P++ H+ ++ ++ + G
Sbjct: 22 HYESSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEF--FNEVHSNAHLQKIERSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW +A A + ++ +L G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWISAYSAANSGITLADALLSGTIKNGFSLLRPPGHHAERNRIMGFCIL 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 139 NNVAITARYLQKNGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ EG G NIP+ + ++ Y+ E+V+P ++ F P++++L G D+
Sbjct: 194 GLSSEAGKDEGIGTTKNIPMQANSENQSYIQKFKEVVIPTMEHFGPDIVLLSAGFDAHKE 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV AD+ GG++L EGGY +T
Sbjct: 254 DPLGGMNITTKGFEDLTKIVLESADKICGGKVLSFLEGGYDLT 296
>gi|410669684|ref|YP_006922055.1| histone deacetylase superfamily [Methanolobus psychrophilus R15]
gi|409168812|gb|AFV22687.1| histone deacetylase superfamily [Methanolobus psychrophilus R15]
Length = 630
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 152/316 (48%), Gaps = 16/316 (5%)
Query: 37 TGFDPGFLEVLEKHPENSDRIKNIVSILKRGPI---SPYISWHSGIPAQIPQLLSFHTPD 93
T +P L + K E DRI + L++ I S Y A LL H
Sbjct: 283 TAHNPSVLSI--KTFEVPDRITKAMWYLEKSNIFQSSQYDLVDDFSMATEKDLLRVHDES 340
Query: 94 YINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
YI + GG + D T + P ++ A LA G + A V G ++ + RPPG
Sbjct: 341 YIRFVSNYALNGGGFLGDSTYITPQTYDIAKLAAGAAIKAGDLVAGGKYSFSFVMTRPPG 400
Query: 154 HHAQPTMADGYCFLNNAG-LAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HHA G+C NNA LA L G K++++D D H G+GT E FY VLT+S
Sbjct: 401 HHAGRNRYGGFCLFNNAAVLARYLQEVKGIEKIMILDWDAHAGDGTMEIFYDDPTVLTVS 460
Query: 213 LHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKF 271
LH + HG + P+ G E G G GY++N+ +P G+GD Y+ A E+VVP I+ F
Sbjct: 461 LHRDPHGFY----PRRGFTKEAGVQAGKGYSVNVEMPPGSGDAEYMFAFDEVVVPLIESF 516
Query: 272 EPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY 331
P I+ G D+ + N LT +G+ EM VRS+ + G +++ EGGYH +
Sbjct: 517 SPGFIICSCGFDAYYKEKNVGLSLTSEGFHEMTSKVRSVHN----GNFVLLMEGGYH-DF 571
Query: 332 SAYCLHATLEGVLNLP 347
+ H+ L + P
Sbjct: 572 NGQLCHSVLNALEGKP 587
>gi|255550502|ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis]
gi|223544531|gb|EEF46048.1| Histone deacetylase, putative [Ricinus communis]
Length = 425
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 152/315 (48%), Gaps = 23/315 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISP------YISWHSGIPAQIPQLLSFHTPDYINELVEA 101
E HPE+ R+ IV+ L++ +S I PA + S H Y+ L +A
Sbjct: 80 ESHPESHLRVPAIVTALEKMELSAKFRGPEIIELQHFKPASAIDIASVHAKAYVAGLEKA 139
Query: 102 -DKAG--GKMVCDGT---VLNPGSWGAALLAVGTTLSAMKHVLDGHGK-----IAYALVR 150
D+A G + DGT ++ +L+A G L+ + V+ +AL+R
Sbjct: 140 MDQASQEGIIFIDGTGPTYATATTFQESLMAAGAGLALVDSVVAASNNSQNPPTGFALIR 199
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A G +V +ID DVH+GNGT + FY +
Sbjct: 200 PPGHHAIPKGPMGFCVFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIF 259
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + S+P G +DE+G+G+G G LN+PLP G+GD E++VP Q
Sbjct: 260 FLSTHQD-----GSYPGTGKIDEVGQGDGEGTTLNLPLPGGSGDVAMRTVFDEVIVPCAQ 314
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D DP T + + + LA GGR + EGGY++
Sbjct: 315 RFKPDIILVSAGYDGHVLDPLASLQFTTGTFYMLASNITQLAKDMCGGRCIFFLEGGYNL 374
Query: 330 TYSAYCLHATLEGVL 344
+Y + + L
Sbjct: 375 DSLSYSVADSFRAFL 389
>gi|328781356|ref|XP_001121726.2| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6 [Apis
mellifera]
Length = 1129
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 169/344 (49%), Gaps = 28/344 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +DD ML H +D D HPE RI I + +
Sbjct: 536 VCIVYDDRMLKH------YDIS-DAN-------HPEKPHRINIIYKKFQEYNLLDRSFVQ 581
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTT 130
G A +LL HT +YI+++ K + + L+P +W +A ++ G+
Sbjct: 582 QGRSATKEELLLVHTKEYIDKIKNTKNLKSKELKKQAETYNSVYLHPETWSSACISTGSL 641
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVID 189
L + +VL+G + A++RPPGHHA A G+C NN +A + A+ +V+++D
Sbjct: 642 LQVVDNVLNGESQSGIAIIRPPGHHATEDAACGFCIFNNVAIAAKYAIEFHHVKRVLIVD 701
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL- 247
DVHYGNGT F +KVL IS+H ++GS+ P+ + +G G G+ +NIP
Sbjct: 702 WDVHYGNGTQSIFEEDSKVLYISIHRYDNGSFFPN-SKRANYSYVGSESGEGFTVNIPWN 760
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
G GD Y+ A ++++P +F P +I++ G D+ DP G +T + Y + +
Sbjct: 761 KKGMGDAEYIAAFQQIIMPIAYQFNPELILVSAGFDACIGDPLGGCFVTPELYGHLTHWL 820
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALL 351
SLA+ GR+++ EGGY+ A+ + + +L PL +L
Sbjct: 821 SSLAN----GRVILSLEGGYNTNSIAHAMAICTKSLLGDPLPIL 860
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 132/247 (53%), Gaps = 15/247 (6%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D ++P ++ +LLAVG+T++ ++ + G + A++RPPGHHA + GYCF NN
Sbjct: 195 DAIYIHPSTYRLSLLAVGSTINLVESICKGEIQNGMAIIRPPGHHAMKSEYCGYCFFNNV 254
Query: 171 GLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + L N+ K++++D DVH+G T + FY + +V+ S+H +G + P+ +
Sbjct: 255 AIAAEKVLCNNLASKILIVDWDVHHGQATQQMFYDNPQVIYFSIHRYENGEFWPN-LRES 313
Query: 229 TVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+G+ G GYN N+PL G + Y+ ++++P +F+P++I++ G D++
Sbjct: 314 NFHFVGDDLGEGYNFNVPLNKIGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALG 373
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
P G +T Y + + LA G++ ++ EGG YCL + E
Sbjct: 374 CPEGEMLITPACYAHLLSSLLCLA----SGKVAVILEGG-------YCLKSLSESAALTL 422
Query: 348 LALLSDP 354
LLSDP
Sbjct: 423 RTLLSDP 429
>gi|225851408|ref|YP_002731642.1| histone deacetylase 14 [Persephonella marina EX-H1]
gi|225645028|gb|ACO03214.1| histone deacetylase 14 [Persephonella marina EX-H1]
Length = 306
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 152/313 (48%), Gaps = 27/313 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ +D L HDTG+G HPE +R+ I S + I +
Sbjct: 4 VGYIYDPVYLKHDTGEG----------------HPERPERVSTIDSYIDE--IKKDLVEI 45
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
A ++ H Y E+++ AGG + T + S+ AA+ AVG L A+
Sbjct: 46 KPRRASAKEITLVHDTYYPQEIMDLCSAGGTYLDPDTRCSIFSYEAAVYAVGAGLEAVDS 105
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+++G + +A VRPPGHHA+ + A G+C NN + + A G K+ +ID D H+GN
Sbjct: 106 IMEGKVERVFANVRPPGHHAEFSKAMGFCIFNNVAITARYAQKKGYEKIFIIDFDAHHGN 165
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT + FY + V S H P +P G+ +E G G+G G+ N+PLP GTGD Y
Sbjct: 166 GTQKAFYDDDTVFYFSTHQY-----PFYPGTGSAEEKGVGKGLGFTYNVPLPAGTGDETY 220
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ ++ + F P+M+++ G D DP +T +G +G+IV ++ + S
Sbjct: 221 EDIYSMMLPDLVYHFRPDMVLVSAGYDLHIDDPLTHLEVTTEG---IGKIVENIL-KTSD 276
Query: 317 GRLLIVQEGGYHV 329
+ + EGGY++
Sbjct: 277 SPFIFMLEGGYNL 289
>gi|448680566|ref|ZP_21690883.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula argentinensis DSM 12282]
gi|445769010|gb|EMA20087.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula argentinensis DSM 12282]
Length = 335
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 153/300 (51%), Gaps = 16/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK Y++ A I + H DYI E E D GG
Sbjct: 17 RHPESPDRLRAIRRALKENHGVEYVT---ADDADIDLVREVHDADYIEEFREFCDDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D TV +W AAL + G + A + LDG+ ++L RPPGHHA A G+C
Sbjct: 74 WDAD-TVAVEETWDAALASAGLAVWAAEAALDGNTGRDTPFSLGRPPGHHAVGDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F+NN +A Q AL + +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 133 FINNVAVAAQAALEADADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHED-----GLYP 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G ++E G G+ G NLN+ G Y+ A+ E + PAI+ ++P+++++ G D+
Sbjct: 188 GTGDIEETGTGDADGTNLNVKYKPGADTADYLAAIDECIAPAIEDYDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY M +RSL D L I+ EGGY ++ S +H +G
Sbjct: 248 EHDPISRMRVSTEGYGAMTNRMRSLTDTCDAA-LGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|448366508|ref|ZP_21554631.1| histone deacetylase [Natrialba aegyptia DSM 13077]
gi|445653963|gb|ELZ06819.1| histone deacetylase [Natrialba aegyptia DSM 13077]
Length = 341
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 28/334 (8%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE+SDR++ I LK+ Y+ G P + ++ + H Y+ + GG
Sbjct: 17 RHPESSDRLRAIRERLKKKHGVAYVE---GDPCSLDEIAAVHDRAYVESVESFCADGGGN 73
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCF 166
T +W A + G A+ L G + +++ RPPGHHA A G+CF
Sbjct: 74 WDPDTTAVEDTWDAIRYSAGQACWAVDAALSGETGRQTPFSIGRPPGHHAVEDDAMGFCF 133
Query: 167 LNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+NN +A Q AL+ +V ++D DVH+GNGT + FY + V +S+H
Sbjct: 134 VNNVAVAAQHALDHDDYDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSIHEQ-----GL 188
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G +DE G G+ G +NIP+P GT D GY+ A+ + A++ F+P+++++ G D
Sbjct: 189 YPGTGDIDETGAGDATGTTMNIPMPAGTDDAGYLAAVDGPIAAALESFDPDLLLVSAGFD 248
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHATL 340
+ DP R L+ + Y + +R+LA + L V EGGY + S +H T
Sbjct: 249 AHRHDPISRIRLSTEAYALLADRLRTLA-ADTDASLAFVLEGGYGLDVLADSVSIVHETF 307
Query: 341 EGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+G DPI P+D +V+ ++
Sbjct: 308 DG---------RDPI--QPDDAELDDQVVSVLED 330
>gi|50308651|ref|XP_454328.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643463|emb|CAG99415.1| KLLA0E08383p [Kluyveromyces lactis]
Length = 704
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 185/363 (50%), Gaps = 39/363 (10%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI + IL + P +S I A+ ++L
Sbjct: 71 SYFEYIDPHPEDPRRIYRVYKILAENGLIQDPTLSGADSIGDLMVKVPVREAEEEEILQV 130
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ + + ++ + + D N S+ +A L+ G + A K V++G K
Sbjct: 131 HSRQHLDFISQTEQLERESLLKETEGGDSVYFNNDSYLSAKLSCGGAIEACKAVVEGRVK 190
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P +A G+C +N +A L S K++++D D+H+GNGT +
Sbjct: 191 NSIAVVRPPGHHAEPEIAGGFCLFSNVAVAAANMLKSYPESVRKIMIVDWDIHHGNGTQK 250
Query: 201 GFYRSNKVLTISLHMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
FY ++VL +SLH G + P +G D+ GEG+G G+N NI P G GD Y+
Sbjct: 251 AFYDDDRVLYVSLHRYQLGKYYPG-TIHGNYDQTGEGKGEGFNCNITWPTGGVGDAEYMW 309
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++++P ++FEP+++++ G D++ D G+ +T Y M ++ SLA G
Sbjct: 310 AFEQVIMPMGREFEPDLVLISSGFDAADGDTIGQCHVTPACYGHMTHMLLSLAK----GN 365
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV----KVIESIKQ 374
L +V EGGY+ L + + L + L+ +P P + P K+IE++ +
Sbjct: 366 LCVVLEGGYN-------LDSIAKSALGVCKVLVGEPPDELPAPKKQPTPEAKKMIETVIR 418
Query: 375 YQN 377
Q+
Sbjct: 419 TQS 421
>gi|373458090|ref|ZP_09549857.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
gi|371719754|gb|EHO41525.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
Length = 314
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 151/299 (50%), Gaps = 9/299 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV-EADKAGGKM 108
HPE +R+K I+ L + A L H +I+ + +A K G +
Sbjct: 21 HPERPERLKAILDYLNEKNFLNRVDQFQPSEASEEALRLIHDQSHIDFIKNQAGKEGVTL 80
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVL-DGHGKIAYALVRPPGHHAQPTMADGYCFL 167
TVL+ S GAAL A G A++ V +G+ K+ +A VRPPGHHA+ + A G+C
Sbjct: 81 DVGDTVLSKHSVGAALHAAGAGARALELVFKEGYDKV-FAAVRPPGHHAERSRAMGFCVF 139
Query: 168 NNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A +LA K+++ID DVH+GNGT FY V SLH P P
Sbjct: 140 NNVAIAARLAQREKFAEKILIIDWDVHHGNGTQHAFYEDPTVFYFSLHQY-----PLFPM 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G +E G G G G+ LN+PL G GD YV + + +F+P++I++ G D+
Sbjct: 195 TGLREETGSGPGKGFTLNVPLSYGQGDAEYVEHVERSLAAIESRFKPDLILISAGFDAHV 254
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
DP G LT G+ ++ +V A+RY GR++ EGGYH+ A +H L +L
Sbjct: 255 KDPIGGMRLTTAGFYKLTEMVAQFANRYCTGRIISFLEGGYHLNALAESVHQHLVCMLK 313
>gi|428216994|ref|YP_007101459.1| histone deacetylase superfamily protein [Pseudanabaena sp. PCC
7367]
gi|427988776|gb|AFY69031.1| histone deacetylase superfamily [Pseudanabaena sp. PCC 7367]
Length = 309
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 156/334 (46%), Gaps = 35/334 (10%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
I VF+ D L H TG HPE R++ IV+ LK P++ I W
Sbjct: 6 IPVFYADEFLQHQTGS----------------YHPECPGRLEAIVTALKNSPLADRIDWR 49
Query: 77 SGIPAQ----IPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLS 132
S P Q I + HTPDY+ + GG + + TV+ S+ ALLAV + L
Sbjct: 50 SPTPPQQRDVIAAIEKIHTPDYVRSVQAMSARGGDFIDNDTVVCRQSYDVALLAVSSWLD 109
Query: 133 AMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDID 191
+ VL + + A+ RPPGHHA+P G+C +NA +A AL ++ +V ++D D
Sbjct: 110 GIDRVLQTN-QPAFVAARPPGHHAKPERGMGFCIFSNAAIAANYALEHAQIDRVAILDWD 168
Query: 192 VHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT 251
VH+GNGT E + + ++ S+H P +P G DE G G LN+P+ +
Sbjct: 169 VHHGNGTQEAIWDNPQIAYASMHQ-----FPFYPGTGWADETG---GHNNVLNVPIEARS 220
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
Y+ V+P + KF+P+++++ G D++A DP L + Y + + L
Sbjct: 221 TVDKYLEVFAAEVMPFLSKFQPDLLIVSAGFDANADDPLASILLQPEDYGKFTHLCLQLT 280
Query: 312 DRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
R G EGGY A + A + L+
Sbjct: 281 RRSMFGL-----EGGYDFDSLAKSVLAVIASCLD 309
>gi|33115103|gb|AAP95014.1|AF307341_1 putative histone deacetylase [Cochliobolus carbonum]
Length = 847
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 29/346 (8%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYIS--------WH-SGIPAQIPQLLSFHTPDY----- 94
HPE+ RI +I LK+ G ++ S W + A P++L HT ++
Sbjct: 141 HPEDPRRIHSIFEELKQAGLVASSTSEEDKEDHCWRIAARFATRPEILLIHTEEHYDLVK 200
Query: 95 -INELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
+ + D LN ++ A LA G + A K V+ G + A A++RPPG
Sbjct: 201 SFQNMTSDELKFEAERLDSIYLNNSTYECAKLAAGGAIEACKAVVQGAVRNAIAIIRPPG 260
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVLT 210
HHA+ G+C NN +A ++ N+ C KV+++D DVH+GNG FY VL
Sbjct: 261 HHAESDQPSGFCIFNNVPIATRVCQNAYPETCRKVLILDWDVHHGNGIQHAFYDDPNVLY 320
Query: 211 ISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAI 268
ISLH+ G++ P+ P +G +D GEG G G N+NIP +G GD Y++A ++V+P
Sbjct: 321 ISLHVFKDGTFYPNLP-DGNLDYCGEGRGEGKNVNIPWAEHGMGDSEYLYAFQQVVMPIA 379
Query: 269 QKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH 328
+F P+++++ G D++ D G +T Y M ++ SLA G+L++ EGGY+
Sbjct: 380 TEFNPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHMLMSLA----KGKLVVCLEGGYN 435
Query: 329 VTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+ A A + ++ P L D + P+D A V ++E++K+
Sbjct: 436 LRSIARSALAVTKVLMLEPPDRLRDDLP-APKDSA--VYIVENVKR 478
>gi|448589664|ref|ZP_21649823.1| histone deacetylase [Haloferax elongans ATCC BAA-1513]
gi|445736092|gb|ELZ87640.1| histone deacetylase [Haloferax elongans ATCC BAA-1513]
Length = 336
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 161/332 (48%), Gaps = 31/332 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+++ L+HDTG +HPE +DR++ I L + Y+ P
Sbjct: 5 YNESCLDHDTGA----------------RHPETADRLRAIRRGLAKRHGVEYVE---AAP 45
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A + + H DY++E + + GG TV +W AAL + G A + L G
Sbjct: 46 AVKSTVAAVHDDDYVDEFHDFCRGGGGNWDPDTVAVEETWVAALASAGLAEWAARSALSG 105
Query: 141 HG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNG 197
+ ++L RPPGHHA A G+CF NNA +A Q ++ +V + D DVH+GNG
Sbjct: 106 DDGRRTPFSLGRPPGHHAVEDDAMGFCFFNNAAVAAQAVIDDDLAERVAIFDWDVHHGNG 165
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + FY + V +S+H + +P G VDE G G LNIPL G GD YV
Sbjct: 166 TQDIFYDRDDVFYVSIHED-----GLYPGTGEVDETGADGAEGTTLNIPLRAGAGDADYV 220
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
++ E + PA+++F+P++ ++ G D+ DP R ++ +GY + VR L D
Sbjct: 221 YSFEETIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAMLTERVRDLCDDTDTA 280
Query: 318 RLLIVQEGGY---HVTYSAYCLHATLEGVLNL 346
L V EGGY ++ +H T +G L +
Sbjct: 281 -LSFVLEGGYGLDTLSEGVAIVHETFDGRLAM 311
>gi|406913016|gb|EKD52505.1| histone deacetylase family protein [uncultured bacterium]
Length = 306
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 146/315 (46%), Gaps = 35/315 (11%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGP----ISPYIS 74
+FWD+ H+ +G HPE+ R+ I ++ P I P +
Sbjct: 5 IFWDERCTKHEMSRG----------------HPESPQRLWAIKQVIDANPRLVHIEPRL- 47
Query: 75 WHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLSA 133
A ++ S HT + LV+ + D T N + AA L+ G+T++
Sbjct: 48 ------ASFEEVSSIHTEKLVR-LVDESRGKSNTCFDPDTFSNKHTATAAFLSAGSTIAL 100
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDV 192
+ V G ++ RPPGHHA+ G+CF NN +A Q + K + ++D DV
Sbjct: 101 AEKVEKGEWDNGFSFARPPGHHAEHDCVMGFCFFNNIAIAAQQLIEKHHKKRIAIVDYDV 160
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
H+GNGT FY + VL S+H P +P G E G G G+++N PLP +
Sbjct: 161 HHGNGTQASFYDRDDVLFCSVHHY-----PFYPGTGGSFETGASRGKGFSVNAPLPGDSD 215
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y ++VPA+ F+P I++ G D+ DP G LT G+ M + + LA
Sbjct: 216 DDDYKKVFDNIIVPAVDSFKPEFILVSAGFDAHERDPLGGMKLTKQGFAFMNKRLIELAY 275
Query: 313 RYSGGRLLIVQEGGY 327
+ GG+++ V EGGY
Sbjct: 276 LHCGGKIVFVLEGGY 290
>gi|427429233|ref|ZP_18919269.1| Acetylspermidine deacetylase [Caenispirillum salinarum AK4]
gi|425880913|gb|EKV29607.1| Acetylspermidine deacetylase [Caenispirillum salinarum AK4]
Length = 309
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 151/299 (50%), Gaps = 11/299 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPENSDR++ I+ +L+ + A QL+ H YI +++A G
Sbjct: 20 HPENSDRLRAIMRVLEAEDFM-MLHREEAPHATREQLMRVHPLSYIERVMDAVPHDGHHH 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG TVL+P S AAL A G +A+ V G + A+ VRPPGHHA+ MA G+C N
Sbjct: 79 IDGDTVLSPESGEAALRAAGAVCTAVDAVCKGEVRNAFCPVRPPGHHAEREMAMGFCVFN 138
Query: 169 NAGL-AVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA + A G +V VID DVH+GNGT F+ + S H P P +
Sbjct: 139 NAAIGAYHARAEHGLKRVAVIDWDVHHGNGTQHIFWDDPDMFYASTHQF-----PQWPNS 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G + +N+PLP +G + AM++ ++P +++F+P++I++ G D+ A
Sbjct: 194 GAPAETGAHDNI---VNVPLPVRSGGDEFRQAMSDEILPRLREFDPDLIIISCGFDAHAS 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP + + + + ++AD GR++ V EGGY + A C A + ++ L
Sbjct: 251 DPMAYLLFQVQDFVWATKELMAIADDCCEGRVVSVLEGGYDIRALAGCTVAHVRALMGL 309
>gi|162454439|ref|YP_001616806.1| histone deacetylase [Sorangium cellulosum So ce56]
gi|161165021|emb|CAN96326.1| histone deacetylase family protein [Sorangium cellulosum So ce56]
Length = 369
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 151/292 (51%), Gaps = 7/292 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWH-SGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
HPE +R++ ++R + H + A +L H P Y+ L +
Sbjct: 31 HPERPERLEAARRAIERCAAAGLALEHVASRDATDEELARVHAPRYLESLGRLSGHYAAL 90
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T + P S AA G ++ + V+ G G++ AL+RPPGHHA G+C LN
Sbjct: 91 DPD-TYVVPRSVEAARRGAGAAVALVDAVIAGPGRLGVALLRPPGHHATRDAGMGFCLLN 149
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
N +A + AL+SG +V V+D DVH+GNGT + F+ +VL SLH W P +P G
Sbjct: 150 NVAVAARAALSSGLSRVAVVDFDVHHGNGTQDIFWDDPRVLFCSLH----QW-PFYPGTG 204
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DELG G+G GY +N+PL +G D Y A EL++P + ++ P +I++ G D+ D
Sbjct: 205 AADELGGGDGAGYTVNVPLSDGATDAVYEAAFDELLLPVLDEYAPELILVSAGFDAHERD 264
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
P L+ Y MGR + ++A + GRL I EGGY +T L A L
Sbjct: 265 PMAAMKLSRAAYAAMGRRLAAMATAKARGRLAIFLEGGYDLTALESSLTAAL 316
>gi|195432308|ref|XP_002064165.1| GK20022 [Drosophila willistoni]
gi|194160250|gb|EDW75151.1| GK20022 [Drosophila willistoni]
Length = 1136
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 18/310 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV--------EA 101
HPE RIK+I + K + + A ++ HT ++N + E
Sbjct: 568 HPEQPMRIKHIHQMHKEYELLTRMMPLMPRAATTDEVCLAHTRSHVNSIRRLLGRSPEEL 627
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
+ G + L+P ++ A LA G+ L A+ VL G + VRPPGHHA+P
Sbjct: 628 QELGAGF--NSVYLHPRTFDCATLAAGSVLQAVDCVLRGETRSGICNVRPPGHHAEPDQP 685
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL IS+H HGS
Sbjct: 686 HGFCIFNNVAIAAQYAIRDFGLQRVLIVDWDVHHGNGTQHIFEANPKVLYISVHRYEHGS 745
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+ G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 746 FFPKGP-DGNYDVVGKQAGRGFNVNIPWNKKGMGDMEYALAFQQLIMPIAYEFNPQLVLV 804
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + +LA GG++++ EGGY+V +Y +
Sbjct: 805 SAGFDAAIGDPLGGCKVTPEGYGLFTHWLSALA----GGKIIVCLEGGYNVNSISYAMTM 860
Query: 339 TLEGVLNLPL 348
+ +L P+
Sbjct: 861 CTKSLLGDPM 870
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 29/357 (8%)
Query: 14 EGIINVFWD----DGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPI 69
E + ++F + GML T +FD + H E +R ++ + +
Sbjct: 95 ETVTDIFQNAVNAKGMLRGPTAL-IFDETMSQHCCLWDKLHWERPERFTRVLERCQELKL 153
Query: 70 SPYISWHSGIPAQIPQLLSFHTPDYINEL-----VEADKAGGKMVC--DGTVLNPGSWGA 122
A ++L HT ++ +L + D+ ++ D ++P ++
Sbjct: 154 VDRCLRIKSRSATKEEILKLHTAEHYEQLELTSGIRDDENMEELSSHFDSIYIHPSTFEL 213
Query: 123 ALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-G 181
+LLA G+T+ + ++ G + A++RPPGHHA +GYCF NN LA + AL+
Sbjct: 214 SLLASGSTIELVDQLIMGKAQNGMAIIRPPGHHAMKAEFNGYCFFNNVALAAKHALDKHK 273
Query: 182 CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFG 240
++++ID DVH+G GT FY +VL S+H +GS+ P+ +G G G G
Sbjct: 274 LQRILIIDYDVHHGQGTQRFFYDDPRVLYFSIHRFEYGSFWPN-LHESDFHAIGTGAGQG 332
Query: 241 YNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMD 298
YN N+PL N TG + Y+ +L++P +F+P +I++ G D++ P G +T
Sbjct: 333 YNFNVPL-NATGMTNGDYLAIFQQLLMPVALEFQPELILVSAGYDAALGCPEGEMEVTPA 391
Query: 299 GYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
Y + + LA R+ +V EGG YCL + EG +LL DP
Sbjct: 392 CYPHLLNPLLRLA----SCRVAVVLEGG-------YCLESLAEGAALSLRSLLGDPC 437
>gi|167567092|ref|ZP_02360008.1| histone deacetylase superfamily protein [Burkholderia oklahomensis
EO147]
gi|167574811|ref|ZP_02367685.1| histone deacetylase superfamily protein [Burkholderia oklahomensis
C6786]
Length = 342
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 129/242 (53%), Gaps = 11/242 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G + DG + P +W AA + A + V DG + AYAL RPPGHHA A+G
Sbjct: 109 AGYHLGDGACPIGPHTWEAAYGSAQVAAHAAQLVTDGE-RAAYALCRPPGHHAYAERANG 167
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNN +A Q AL + +V ++DIDVH+GNGT FYR VLT+SLH + + P
Sbjct: 168 FCYLNNTAIAAQ-ALRAVHARVAILDIDVHHGNGTQGIFYRRRDVLTVSLHRDTRDFTPF 226
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G E GE +G GYNLN+PLP GTGD Y+ A+ E I+ F P +V+ +G D
Sbjct: 227 F--TGHAHERGEADGEGYNLNLPLPRGTGDTAYLSALDE-ACARIRAFAPGALVVALGLD 283
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
+ DP +T G+ + + L G ++VQEGGY L + L G
Sbjct: 284 AHEHDPYQSLAITTAGFFRITAEIARL-----GLPTVLVQEGGYLSASLGENLSSALRGF 338
Query: 344 LN 345
L+
Sbjct: 339 LS 340
>gi|367469878|ref|ZP_09469603.1| Acetylspermidine deacetylase [Patulibacter sp. I11]
gi|365815054|gb|EHN10227.1| Acetylspermidine deacetylase [Patulibacter sp. I11]
Length = 342
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 31/339 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTG HPE + RI I L+ + + S PA + Q
Sbjct: 9 LRHDTGS-----------------HPERAARIVAIERELEARDWCGFEARESP-PATVEQ 50
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL---DGHG 142
L + H P ++ + GG + TV++ GSW AAL A G ++ + +L
Sbjct: 51 LQAVHPPSHVERIRALAATGGGAIDADTVVSAGSWEAALHAAGGAIAVVDALLGEDPARP 110
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A +L RPPGHH + G+C NN +A + A + G +V+++D DVH+GNGTAE
Sbjct: 111 RRAASLHRPPGHHCETAQPMGFCLFNNIAVAARHARDRHGLQRVLIVDWDVHHGNGTAEI 170
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
F +++VL S+H + P +P G E G G G G+ +N+P+P G+GD + +
Sbjct: 171 FAGTDEVLFCSIHEH-----PLYPGTGLPSERGHGAGEGFTVNLPVPGGSGDETWTAMVE 225
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
++V+P + + P +I++ G D+ DP ++ +G+ + V LAD L +
Sbjct: 226 QVVLPIARSYAPQLILVSAGYDAHEQDPLATCRVSDEGFAAIAGSVDRLADELDVP-LGL 284
Query: 322 VQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE 360
V EGGY V A + ATLE VL P A + P+A P
Sbjct: 285 VLEGGYAVEALARSVAATLE-VLAGPSA--AAPVATGPR 320
>gi|237748840|ref|ZP_04579320.1| histone deacetylase superfamily protein [Oxalobacter formigenes
OXCC13]
gi|229380202|gb|EEO30293.1| histone deacetylase superfamily protein [Oxalobacter formigenes
OXCC13]
Length = 311
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 138/281 (49%), Gaps = 12/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ +R+ + L P + W QLL HTP+Y+N + G +
Sbjct: 21 HPESPERLLAVREALST-PEFESVPWIHAPLGTKEQLLLVHTPEYVNRIATIRPKAGYVP 79
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG TV++PG+W + VG + V+ G Y RP GHHA+P A G+C
Sbjct: 80 LDGGDTVMSPGTWDCVMTCVGAACMGVDLVMKGEADNVYCATRPCGHHAEPDRAMGFCVF 139
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N+A +A A + +V ++D DVH+GNG+ + FY ++ S H + P +P
Sbjct: 140 NHAAVATAYAYDKYKLDRVALVDFDVHHGNGSQDAFYHRPEIFYASCHQS-----PFYPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G E G +N+PL G G + + MT ++PA++KF P+ +++ G D+
Sbjct: 195 SGARYETGIDHNI---VNVPLSRGAGSDKFRNCMTFEILPALKKFNPSFLIISAGFDAHK 251
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G T D Y + + + +AD GR++ + EGGY
Sbjct: 252 KDPLGGLAFTDDDYYWVTKELMKVADECCDGRIVSILEGGY 292
>gi|326489521|dbj|BAK01741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 444
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 171/356 (48%), Gaps = 37/356 (10%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSG---------IPAQIPQLLSFHTPDYINEL 98
E HPE++ R+ IV L++ ++ S H G PA + + H+ YI L
Sbjct: 99 EAHPESNKRVPAIVDALEKLELT---SKHRGSQILEIRNFYPASLDDVARVHSRTYITGL 155
Query: 99 VEADKAGGKMVCDGTVLNPGS---------WGAALLAVGTTLSAMKHVLDGHG-----KI 144
+KA K + +G + G+ + +LL+ G ++ + V+ +
Sbjct: 156 ---EKAMSKALDEGLIFIEGTGPTYATQTTFTESLLSAGAGITLVDSVVAASKLGPSPPL 212
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFY 203
+AL+RPPGHHA P G+C N +A + A + G +V++ID DVH+GNGT + FY
Sbjct: 213 GFALIRPPGHHAVPDGPMGFCVFGNIAVAARYAQHQHGLKRVMIIDFDVHHGNGTCDAFY 272
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
+ +S H G S+P G ++ +G+G G G LN+PLP G+GD A ++
Sbjct: 273 DDPDIFFLSTH----QLG-SYPGTGKMNLIGQGSGEGTTLNLPLPGGSGDYSMRCAFDDV 327
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
+ P+ Q+F+P++I++ G D+ A DP T + + ++ LA GGR +
Sbjct: 328 IAPSAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLASSIKQLARELCGGRCVFFL 387
Query: 324 EGGYHVTYSAYCLHATLEGVLNLP--LALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
EGGY++ + + T L+ P A +P Y E + IE ++ +
Sbjct: 388 EGGYNLQSLSSSVADTFRAFLDEPSLAAQFDNPAMLYEEPTRRIKEAIEKVRHLHS 443
>gi|336385808|gb|EGO26955.1| hypothetical protein SERLADRAFT_436772 [Serpula lacrymans var.
lacrymans S7.9]
Length = 681
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 175/379 (46%), Gaps = 62/379 (16%)
Query: 4 SPSEPPSPA-----------AEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPE 52
+P+ PPSP E + + ML H +G E+ PE
Sbjct: 33 APARPPSPGPGRASSEPLRILELTVGYVYSSEMLEHWCLRGH-------------EEQPE 79
Query: 53 NSDRIKNIVS------ILKRGPISPYISWHSGIPAQIPQLLSFHTPDY------INELVE 100
RI ++S +KR PI A+ ++L H+ D I L
Sbjct: 80 RIIRIWKLISEAHLDQKMKRIPIRA---------AKREEVLLVHSEDLWHRIQAIQSLTL 130
Query: 101 ADKAGGKMVCD--GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
D + D +N G+ +ALL+ G + A V K A+A+VRPPGHHA+P
Sbjct: 131 QDIQDSEAYYDLLSLYVNTGTTRSALLSCGGVIEACLAVARNELKKAFAIVRPPGHHAEP 190
Query: 159 TMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-N 216
G+CF NN +A ++ L + +++++D DVH+GNGT F +L +SLH
Sbjct: 191 DEHMGFCFFNNVAVAARVVQLLTPVKRIMILDWDVHHGNGTQRAFNDDPSILYVSLHRYQ 250
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNM 275
+G + P G + GEG G GY++NIP P G GD Y+HA T +V+P +F P +
Sbjct: 251 NGQFYPGGTFGG-ISSCGEGAGRGYSVNIPWPEIGMGDADYLHAFTSIVMPIAMEFAPEL 309
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+++ G D+ DP G +T GY M ++ LA GG+L++ EGG YC
Sbjct: 310 VIISAGFDAVEGDPLGECRVTPIGYAHMTHMLSGLA----GGKLIVALEGG-------YC 358
Query: 336 LHATLEGVLNLPLALLSDP 354
+ AT L + +L +P
Sbjct: 359 VDATANSALAVTRVMLGEP 377
>gi|448532894|ref|ZP_21621314.1| histone deacetylase superfamily protein [Halorubrum hochstenium
ATCC 700873]
gi|445706128|gb|ELZ58013.1| histone deacetylase superfamily protein [Halorubrum hochstenium
ATCC 700873]
Length = 334
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 156/306 (50%), Gaps = 30/306 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGIPAQIP 84
L HDTG E+HPEN DR++ I +RG + + + PA+
Sbjct: 10 LEHDTG----------------ERHPENPDRLRAI----RRGLTKRHGVEYVEADPAEKA 49
Query: 85 QLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG-- 142
+ + H Y++EL GG TV + G+W AAL + G A + +DG
Sbjct: 50 AVTAVHDAGYVDELESFVADGGGSWDPDTVASEGTWDAALTSAGLAQWAAREAIDGASGR 109
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEG 201
+ +A+ RPPGHHA A G+CF NNA +A Q L+ +V + D DVH+GNGT +
Sbjct: 110 QTPFAIGRPPGHHAVTGDAMGFCFFNNAAVAAQTVLDEDLADRVAIFDWDVHHGNGTQDI 169
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY V S+H + +P G +DE GEGEG G N+PL G GD Y++A+
Sbjct: 170 FYDRGDVFYASIHED-----GLYPDTGALDETGEGEGEGTTANLPLAAGAGDADYLYAVD 224
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E V PA+ +F+P+++++ G D+ DP R ++ +GY + +R+LA +
Sbjct: 225 EAVAPAVDRFDPDLVLVSAGFDAHRHDPISRMRVSSEGYALLTDRIRTLASDADAADAYV 284
Query: 322 VQEGGY 327
+ EGGY
Sbjct: 285 L-EGGY 289
>gi|336372977|gb|EGO01316.1| hypothetical protein SERLA73DRAFT_72261 [Serpula lacrymans var.
lacrymans S7.3]
Length = 678
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 175/379 (46%), Gaps = 62/379 (16%)
Query: 4 SPSEPPSPA-----------AEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPE 52
+P+ PPSP E + + ML H +G E+ PE
Sbjct: 33 APARPPSPGPGRASSEPLRILELTVGYVYSSEMLEHWCLRGH-------------EEQPE 79
Query: 53 NSDRIKNIVS------ILKRGPISPYISWHSGIPAQIPQLLSFHTPDY------INELVE 100
RI ++S +KR PI A+ ++L H+ D I L
Sbjct: 80 RIIRIWKLISEAHLDQKMKRIPIRA---------AKREEVLLVHSEDLWHRIQAIQSLTL 130
Query: 101 ADKAGGKMVCD--GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
D + D +N G+ +ALL+ G + A V K A+A+VRPPGHHA+P
Sbjct: 131 QDIQDSEAYYDLLSLYVNTGTTRSALLSCGGVIEACLAVARNELKKAFAIVRPPGHHAEP 190
Query: 159 TMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-N 216
G+CF NN +A ++ L + +++++D DVH+GNGT F +L +SLH
Sbjct: 191 DEHMGFCFFNNVAVAARVVQLLTPVKRIMILDWDVHHGNGTQRAFNDDPSILYVSLHRYQ 250
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNM 275
+G + P G + GEG G GY++NIP P G GD Y+HA T +V+P +F P +
Sbjct: 251 NGQFYPGGTFGG-ISSCGEGAGRGYSVNIPWPEIGMGDADYLHAFTSIVMPIAMEFAPEL 309
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+++ G D+ DP G +T GY M ++ LA GG+L++ EGG YC
Sbjct: 310 VIISAGFDAVEGDPLGECRVTPIGYAHMTHMLSGLA----GGKLIVALEGG-------YC 358
Query: 336 LHATLEGVLNLPLALLSDP 354
+ AT L + +L +P
Sbjct: 359 VDATANSALAVTRVMLGEP 377
>gi|456865517|gb|EMF83851.1| histone deacetylase family protein [Leptospira weilii serovar Topaz
str. LT2116]
Length = 316
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 144/285 (50%), Gaps = 14/285 (4%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H E+SDR+ ++ L + S + +P++ FH L + +++ GK
Sbjct: 22 HYESSDRLLACINKLHQTSYFNSLFFPEMKKVPSEF-----FHEIHSNTHLQKIERSKGK 76
Query: 108 M--VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
T SW AA A + + +L G K ++L+RPPGHHA+ G+C
Sbjct: 77 RGYFDSDTPFTEKSWIAAYSAANSGIILADALLSGTIKNGFSLLRPPGHHAEHNRIMGFC 136
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
LNN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 137 MLNNVAITARYLQKNGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYP 191
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G E G+ EG G NIP+ + ++ Y+ E+V+P ++ F P+++++ G D+
Sbjct: 192 MTGLSSETGKNEGIGTTKNIPMQANSDNQAYIQKFKEVVIPTMENFGPDIVLISAGFDAH 251
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV AD+ G++L EGGY++T
Sbjct: 252 KEDPLGGMNITTKGFEDLTKIVLESADKICEGKVLSFLEGGYNLT 296
>gi|363750828|ref|XP_003645631.1| hypothetical protein Ecym_3324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889265|gb|AET38814.1| Hypothetical protein Ecym_3324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 706
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 182/358 (50%), Gaps = 31/358 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S I A ++L
Sbjct: 73 SYFEYIDPHPEDPRRIYRIYKILAENGLIEDPTLSGVDDIGNLMLKIPIREATEDEILLV 132
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ L + + + D N S +A L+ G + A K V++G K
Sbjct: 133 HSKEHVEFLKTTNTMSREQLLKETEAGDSVYYNNDSLVSAKLSCGGAIEACKAVVEGRVK 192
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A+VRPPGHHA+P +A G+C +N +A + L + KV+++D D+H+GNGT
Sbjct: 193 NALAVVRPPGHHAEPEVAGGFCLFSNVAVAARNILKNYPESVRKVMILDWDIHHGNGTQR 252
Query: 201 GFYRSNKVLTISLHMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY N+VL +SLH G + P + G ++ GEG+G G+N NIP G GD Y+
Sbjct: 253 AFYNDNRVLYVSLHRYELGRYYPG-TEYGNYNQSGEGKGEGFNCNIPWSCGGVGDAEYMW 311
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ ++ Y M +++SLA G
Sbjct: 312 AFEQIVIPMGREFQPDLVIISSGFDAADGDTIGQCHVSPACYGHMTHMLKSLAK----GN 367
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
+ +V EGGY++ A ++ ++ P L DP P+ EA + IE++ + Q
Sbjct: 368 MCVVLEGGYNLDSIAKSALGVVKVLIGEPPDELPDPFK-QPKPEA--IATIETVIREQ 422
>gi|406896137|gb|EKD40515.1| hypothetical protein ACD_75C00026G0007 [uncultured bacterium]
Length = 317
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 154/311 (49%), Gaps = 21/311 (6%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+D+ L HDTG G+ HPE+ +R+K I L + ++
Sbjct: 8 YDEKYLLHDTG----------GY------HPESPERLKAIYKRLTESGVLDKLTRIQAER 51
Query: 81 AQIPQLLSFHTPDYINELVEADKAG-GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
A + + H YI + EA G + + ++ A AVG L A+ V+
Sbjct: 52 ANQRWIEAVHAIRYITKFDEACLYGLNEFEHPDNAICRETYDVAFYAVGGVLKAIDAVMK 111
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGT 198
G A+ VRPPGHHA+ G+C+ NN + + L G +V +ID DVH+GNGT
Sbjct: 112 GEVDNAFCAVRPPGHHAERDKPMGFCYFNNVAIGARYLQKEHGITRVGIIDFDVHHGNGT 171
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
F R VL S+H H S+ ++P G ELG GEG GY +N P+ G GD Y
Sbjct: 172 QHIFDRDPTVLYYSIH-EHPSF--AYPGTGRDFELGIGEGEGYTVNSPVLPGRGDEEYRR 228
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
+ + +VPA +KF+P I+L G D+ D LT DGY + ++ +L +R++ GR
Sbjct: 229 LIMQDLVPAFKKFKPEFIMLSAGFDAHESDMMSGTNLTTDGYDFISEVIVNLVNRFADGR 288
Query: 319 LLIVQEGGYHV 329
++ V EGGY++
Sbjct: 289 VVSVLEGGYNL 299
>gi|387876580|ref|YP_006306884.1| histone deacetylase superfamily protein [Mycobacterium sp. MOTT36Y]
gi|386790038|gb|AFJ36157.1| histone deacetylase superfamily protein [Mycobacterium sp. MOTT36Y]
Length = 309
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 135/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVEAAL-RQPRFDALVRETAEPAELAAARYVHSNRYVDALEAARPEHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLRAVDRVLAGDVQNAFVACRPPGHHAESERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A E ++PA+ F P +I++ G D+
Sbjct: 194 TGAARETGVGNIF----NAPLAPGDGGAELRAAFAERILPALHAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A+ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFAWVTRELMKSAETLCDGRLVAVLEGGY 290
>gi|144899349|emb|CAM76213.1| histone deacetylase superfamily [Magnetospirillum gryphiswaldense
MSR-1]
Length = 360
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 160/322 (49%), Gaps = 25/322 (7%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTG E HPE +DR++ I IL R Y+ A + Q
Sbjct: 61 LEHDTG----------------EFHPECADRLRAIGHILDREEFM-YVPREEAPKATLAQ 103
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
+L HT D+ ++++++ A G + DG T ++P S AAL + G ++A+ V G +
Sbjct: 104 ILRAHTQDHYDQVMDSIPAEGSVELDGDTFVSPRSGEAALHSAGAAIAAVDEVATGRSRN 163
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFY 203
A+ RPPGHHA+ G+C +NA +A A + G +V V+D DVH+GNGT + +
Sbjct: 164 AFCATRPPGHHAERNAIMGFCLFSNAAIAALHARDQHGFKRVAVVDFDVHHGNGTQDVLW 223
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
S H + + P G V+E+G G +N+PLP GT + A T++
Sbjct: 224 NEPGTFYASSHQDD-----AFPYTGKVEEVGPPGGCTV-VNVPLPAGTASDVFRAAYTDI 277
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
++P ++ F P+ +++ G D+ A DP L + + + + + +A ++ R++ V
Sbjct: 278 ILPKLEAFAPDFLIISAGFDAHAADPMAHLRLQVADFEWLTQKLLGIARTHAQRRVVSVL 337
Query: 324 EGGYHVTYSAYCLHATLEGVLN 345
EGGY A C+ A L ++
Sbjct: 338 EGGYETRALAACVAAHLRVLME 359
>gi|418055614|ref|ZP_12693668.1| histone deacetylase superfamily [Hyphomicrobium denitrificans
1NES1]
gi|353209892|gb|EHB75294.1| histone deacetylase superfamily [Hyphomicrobium denitrificans
1NES1]
Length = 314
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 144/309 (46%), Gaps = 30/309 (9%)
Query: 24 GMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI 83
L HDTG+G HPE DR++ I +L+ S + + A
Sbjct: 10 AFLQHDTGEG----------------HPERPDRMRAIDKVLQDARFSELRRREAPLRADD 53
Query: 84 PQLLSF-HTPDYI---NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
++ H DY+ + L E G + + TV++PG+W AA AVG L A+ V+
Sbjct: 54 TDYIALAHRKDYVQALSRLSEQITEGYRHIDGDTVVSPGTWEAARRAVGAGLDAVDQVVR 113
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGT 198
G A+ VRPPGHHA+ A G+C NN +A A G +V V+D DVH+GNGT
Sbjct: 114 GDASNAFCQVRPPGHHAETNHAMGFCLFNNIAIAAHYARAKHGLERVAVVDFDVHHGNGT 173
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
E F+ + S H P P G + E G G F N PL G G +
Sbjct: 174 QEIFWSDKNLFYGSTHQM-----PLFPGTGALQETGVGNIF----NAPLRAGDGREHFEE 224
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A + ++ + F P+M+++ G D+ DP G L D +R V +A R++ GR
Sbjct: 225 AFRDRILGPLHNFAPDMVLISAGFDAHRRDPLGGLELVEDDFRWATEAVAEVARRHANGR 284
Query: 319 LLIVQEGGY 327
++ + EGGY
Sbjct: 285 IVSMLEGGY 293
>gi|255722335|ref|XP_002546102.1| histone deacetylase HDA1 [Candida tropicalis MYA-3404]
gi|240136591|gb|EER36144.1| histone deacetylase HDA1 [Candida tropicalis MYA-3404]
Length = 849
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 38/316 (12%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E ++ HPE+ RI I L I P++ A ++L
Sbjct: 159 SYFEYIDPHPEDPRRIYRIYKRLVEAGLVQDSSLSGVDEIGPFMLKIPIREATTEEILEV 218
Query: 90 HTPDYIN-----------ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
H+ ++N +L+E + G D +N S+ +A L+ G T+ A K V+
Sbjct: 219 HSESHLNFIQNTESMSRDQLLEETEKG-----DSIYVNNDSYLSAKLSCGGTIEACKAVI 273
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYG 195
+G K + A+VRPPGHHA+P G+C +N +A + L + ++V++D D+H+G
Sbjct: 274 EGKVKNSLAVVRPPGHHAEPDTPAGFCLFSNVAVAAKNILKNYPESVRRIVIVDWDIHHG 333
Query: 196 NGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGD 253
NGT + FY +VL ISLH +G + P + G D++GEG G GYN+NIP + G D
Sbjct: 334 NGTQKAFYNDPRVLYISLHRYENGKFYPG-TKYGNSDQVGEGPGEGYNINIPWRSMGMHD 392
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
YV+A ++++PAI +F+P++I++ G D++ D G ++ GY M +++ +A
Sbjct: 393 GDYVYAFNKILLPAITEFDPDLIIVSSGFDAADGDVIGGCHVSPSGYGYMTHMLKGIA-- 450
Query: 314 YSGGRLLIVQEGGYHV 329
G++ +V EGGY++
Sbjct: 451 --KGKMAVVLEGGYNL 464
>gi|433592621|ref|YP_007282117.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natrinema pellirubrum DSM 15624]
gi|448335059|ref|ZP_21524211.1| histone deacetylase [Natrinema pellirubrum DSM 15624]
gi|433307401|gb|AGB33213.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natrinema pellirubrum DSM 15624]
gi|445617995|gb|ELY71579.1| histone deacetylase [Natrinema pellirubrum DSM 15624]
Length = 344
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I L++ Y+ P + + + H +Y+ +
Sbjct: 13 DPG-----SRHPESPDRLRAIRKRLQKKHGVEYVE---ADPCDLDAMATVHEREYLESVR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E GG T +W AA + G A + L+G + +++ RPPGHHA
Sbjct: 65 EFCADGGGSWDPDTTAVEETWDAASRSAGLACWAAEEALEGATGRETPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSGC---GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NN +A Q AL+ +V ++D DVH+GNGT + FY V +SLH
Sbjct: 125 YDNAMGFCFVNNVAVAAQHALDHDAYDVDRVAILDWDVHHGNGTQDIFYDRGDVFFVSLH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P +G +DE GEG+G G +NIP+P GT D Y+ A+ + A+ F+P+
Sbjct: 185 EQ-----GLYPGSGDIDETGEGDGEGTTMNIPMPAGTDDGEYLAAVDGPIAAALTDFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y + VR+LA+ + L + EGGY +
Sbjct: 240 LLLISAGFDAHRHDPISRIRLSTEAYALLSDRVRTLAED-TDAALAFILEGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVAMVHETFDG 309
>gi|149246145|ref|XP_001527542.1| histone deacetylase HDA1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447496|gb|EDK41884.1| histone deacetylase HDA1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 906
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 37/361 (10%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E + HPE+ RI I L + P+I A I ++L
Sbjct: 219 SYFEYTDPHPEDPRRIYRIYKRLAEAGLVQDPSLSGIDELGPFIEKIPIREATIEEILEV 278
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ ++ + + + D +N S+ +A L+ G T+ A K V++G K
Sbjct: 279 HSEKHLEHIQSTETMTKDELLRETATGDSIYVNNDSYFSAKLSCGGTIEACKAVIEGRVK 338
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A VRPPGHHA+P G+C +N +A + L S ++V++D D+H+GNGT +
Sbjct: 339 NSLAAVRPPGHHAEPDDPGGFCLFSNVAVAAKNILKSYPESVRRIVILDWDIHHGNGTQK 398
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
FY +VL ISLH +G + P + G D++GEG G GYN+NIP G D YV+
Sbjct: 399 SFYDDPRVLYISLHRYENGKFYPG-TKYGGADQVGEGAGKGYNINIPWRTAGMRDGDYVY 457
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P I +F+P++I++ G D++ D G ++ GY M +++ +A G+
Sbjct: 458 AFNKVVIPTILEFDPDLIIVSSGFDAADGDVIGGCHVSPAGYGYMTHMLKGIA----KGK 513
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFP--VKVIESIKQYQ 376
L ++ EGGY+ L + E L + L+ +P + + P ++VI+ + + Q
Sbjct: 514 LAVILEGGYN-------LDSISESALAVAKVLIGEPPENTVKQQPHPDTIEVIDEVIKIQ 566
Query: 377 N 377
+
Sbjct: 567 S 567
>gi|451995023|gb|EMD87492.1| hypothetical protein COCHEDRAFT_1145200 [Cochliobolus
heterostrophus C5]
Length = 847
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 182/347 (52%), Gaps = 31/347 (8%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYIS--------WH-SGIPAQIPQLLSFHTPDYINELV 99
HPE+ RI +I LK+ G ++ S W + A P++L HT ++ +LV
Sbjct: 141 HPEDPRRIHSIFEELKQAGLVASSTSEEDKEDHCWRIAARFATRPEILLIHTEEHY-DLV 199
Query: 100 EA-------DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPP 152
E+ + D LN ++ A LA G + A K V+ G + A A++RPP
Sbjct: 200 ESFQNMTSDELKFEAERLDSIYLNNSTYECAKLAAGGAIEACKAVVQGAVRNAIAIIRPP 259
Query: 153 GHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
GHHA+ G+C NN +A ++ ++ C KV+++D DVH+GNG FY VL
Sbjct: 260 GHHAESDQPSGFCIFNNVPIAARVCQDAYPETCRKVLILDWDVHHGNGIQHAFYDDPNVL 319
Query: 210 TISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPA 267
ISLH+ G++ P+ P +G +D GEG G G N+NIP +G GD Y++A ++V+P
Sbjct: 320 YISLHVFKDGTFYPNLP-DGNLDYCGEGRGEGKNVNIPWAEHGMGDSEYLYAFQQVVMPI 378
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+F P+++++ G D++ D G +T Y M ++ SLA G+L++ EGGY
Sbjct: 379 ATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHMLMSLA----KGKLVVCLEGGY 434
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
++ A A + ++ P L D + P+D A V ++E++K+
Sbjct: 435 NLRSIARSALAVTKVLMLEPPDRLRDDLP-APKDSA--VYIVENVKR 478
>gi|451948192|ref|YP_007468787.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
gi|451907540|gb|AGF79134.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
Length = 319
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 22/326 (6%)
Query: 22 DDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPA 81
D L HDTG G HPE + R++ I LK P +S+ S A
Sbjct: 12 DQRFLQHDTGGG---------------DHPETAARLQVIRRSLKSSDCYPSLSFLSPQAA 56
Query: 82 QIPQLLSFHTPDYINELVEADKAGGKMV--CDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
L H+ +++ E+ AG + D V S+ A LA G +SA+ + +
Sbjct: 57 TRSDLTRVHSENWLFRFEESVLAGQTYIDHFDNQVCYD-SYDIACLAAGAGISAIDLIEE 115
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGT 198
G G + LVRPPGHHA+ ++ G+CF NN +A + + +V++ D D H+GNG
Sbjct: 116 GKGDNIFCLVRPPGHHAERSVPFGFCFFNNCVVAARYWQHKYHKRRVLIFDFDAHHGNGI 175
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
F + IS+H H S+ S+P G DE G G+G G LN+PL G D +
Sbjct: 176 QSAFEEESDSYYISIH-EHPSF--SYPGTGYGDEHGMGDGKGTILNLPLSPGANDGDVEN 232
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
+ ++++P +++++P I++ G D+ D + D Y +GR V+S A+R++ G+
Sbjct: 233 LLKKVILPKLEEWQPEAIIIAAGFDAHIADDMSGLHYSTDLYFTLGRQVKSWANRFTNGK 292
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVL 344
LL + EGGY ++ + A + G+L
Sbjct: 293 LLSILEGGYELSVLGDSVEAYVRGIL 318
>gi|170738737|ref|YP_001767392.1| histone deacetylase superfamily protein [Methylobacterium sp. 4-46]
gi|168193011|gb|ACA14958.1| histone deacetylase superfamily [Methylobacterium sp. 4-46]
Length = 309
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 150/297 (50%), Gaps = 11/297 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE ++RI+ I L+ S + A++ H +Y+ + EA G +
Sbjct: 20 HPERAERIRAIERALEDERFSALVR-EQAPRAELSVATLAHPEEYVAAIAEASPREGLVA 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D TV++PG+ A L ++G + A+ V+ G A+A +RPPGHHA+ A G+CF N
Sbjct: 79 IDSDTVMSPGTLEAVLRSLGAAVQAVDEVMSGKVANAFAAMRPPGHHAERRRAMGFCFFN 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
A +A + A + G +V ++D DVH+GNG+ + F+R VL S H P +P
Sbjct: 139 QAAVAARHARKAYGAERVALVDWDVHHGNGSQDIFWRDKSVLYCSTHQM-----PLYPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL G + A ++P I F P++IV+ G D+
Sbjct: 194 GATSERGDHDTI---VNAPLRPGDDGERFREAFETAILPRIDAFHPDLIVISAGFDAHWR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
DP LT + R + LADR++GGR++ V EGGY + + + A +E ++
Sbjct: 251 DPLANLQLTEADFAWTTRRLMDLADRHAGGRVVSVLEGGYDLDGLSRSVAAHVEALM 307
>gi|359146416|ref|ZP_09179944.1| Histone deacetylase [Streptomyces sp. S4]
Length = 382
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 162/320 (50%), Gaps = 6/320 (1%)
Query: 28 HDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL 87
HD G G PG +E L + + D ++ +++ + + + + +PA +LL
Sbjct: 17 HDPGAGSGYLPVGPG-IEPLRQFAVDPD-LRRAEGLVRASGVMDHFTAVTPLPATDEELL 74
Query: 88 SFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYA 147
H P+++ + A AG +N S AA LA G A V+DG + AY
Sbjct: 75 RVHVPEHLERVEAASAAGAGDAGVYAHVNYHSAHAARLAAGACAQAATAVVDGRFERAYC 134
Query: 148 LVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNK 207
LVRPPGHHA+P A C NN +A + A + G +V+V+D DVH+GNG FY
Sbjct: 135 LVRPPGHHAEPDRAMALCLYNNLAVAARTAQHHGVRRVLVLDWDVHHGNGLQRVFYDDPD 194
Query: 208 VLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
VL ISLH + G +G V E G G+G G LN+PLP G+G Y+ A+ ++V PA
Sbjct: 195 VLYISLHQD----GLFPAASGRVLETGTGKGTGRTLNVPLPAGSGHGAYLAALDQVVEPA 250
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ F P +I++ G D+ A DP GR T + + + LAD +GGR++ EGGY
Sbjct: 251 ARAFRPELILVAAGVDAGAHDPMGRMMCTSRTFHALASALCRLADELAGGRIVFAHEGGY 310
Query: 328 HVTYSAYCLHATLEGVLNLP 347
Y + AT + LP
Sbjct: 311 SAWYQPTLVLATAAAIAGLP 330
>gi|367016591|ref|XP_003682794.1| hypothetical protein TDEL_0G02160 [Torulaspora delbrueckii]
gi|359750457|emb|CCE93583.1| hypothetical protein TDEL_0G02160 [Torulaspora delbrueckii]
Length = 714
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 169/336 (50%), Gaps = 28/336 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG-----PISPYISWHSGIPAQIP-------QLLSF 89
+ E ++ HPE+ RI + IL P I + +IP ++L
Sbjct: 83 SYFEYIDPHPEDPRRIYRVYKILAENGLINDPTLSGIDEIGDLMLKIPVREATDEEILEV 142
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ + + + + + + + D N S+ +A L+ G + A K V++G K
Sbjct: 143 HSKENLEFVERSSRMKREELLKETEKGDSVYFNNDSYVSAKLSCGGVIDACKAVVEGRVK 202
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A+VRPPGHHA+P G+C +N +A Q L +++++D D+H+GNGT +
Sbjct: 203 NALAVVRPPGHHAEPEAPGGFCLFSNVAVAAQNILKQYPESVRRILILDWDIHHGNGTQK 262
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY +VL ISLH G + P NG D+ GEG+G G+N NI P G GD Y+
Sbjct: 263 AFYNDPRVLYISLHRFEMGKYYPG-TINGRYDQTGEGKGEGFNCNITWPVGGVGDAEYML 321
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y +M +++SLA G
Sbjct: 322 AFEQIVMPMAREFQPDLVIISSGFDAADGDTIGQCHVTPSCYGQMTHMLKSLA----RGN 377
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
L + EGGY++ A + + ++ P L DP
Sbjct: 378 LCVALEGGYNLDAIAISALSVAKVLIGEPPDELPDP 413
>gi|448664772|ref|ZP_21684410.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula amylolytica JCM 13557]
gi|445774359|gb|EMA25380.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula amylolytica JCM 13557]
Length = 335
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 153/300 (51%), Gaps = 16/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK Y++ A I + H DYI E E D GG
Sbjct: 17 RHPESPDRLRAIRRALKENHGVEYVT---ADDADIDLVRKVHDADYIEEFREFCDDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D TV +W AAL + G + A + LDG+ ++L RPPGHHA A G+C
Sbjct: 74 WDAD-TVAVEETWDAALASAGLAVWAAEAALDGNSGRNTPFSLGRPPGHHAVGDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F+NNA +A Q AL + +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 133 FINNAAVAAQAALEADAERVAIFDWDVHHGNGTQDIFYDRSDVFYASIHED-----GLYP 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G V E G G+ G NLN+ G Y+ A+ E + PAI+ ++P+++++ G D+
Sbjct: 188 GTGDVAETGTGDADGTNLNVKYKPGADTADYLAAIDECIAPAIEDYDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY M +RSL D L I+ EGGY ++ S +H +G
Sbjct: 248 EHDPISRMRVSTEGYGAMTDRMRSLTDACDAA-LGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|422301429|ref|ZP_16388797.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790685|emb|CCI13467.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 305
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 159/335 (47%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVEALKQTKWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY+N L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPIEIRDEVIPLVKQVHNQDYVNILRRICQRGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C L+NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLLSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + + ++ SLH P +P G E GE F LNIPLP
Sbjct: 164 WDVHHGNGTQDIVENNPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLPA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|85860006|ref|YP_462208.1| histone deacetylase family protein [Syntrophus aciditrophicus SB]
gi|85723097|gb|ABC78040.1| histone deacetylase family protein [Syntrophus aciditrophicus SB]
Length = 350
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 149/313 (47%), Gaps = 22/313 (7%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
V D+ +NH TG G HPE+ R++ I +L+ +
Sbjct: 6 VVKDERYMNHLTGPG----------------HPESPRRLEVIYDMLEDRDMQGRFQDVPA 49
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
A++ +L H PDY+N + + + T +PGS+ AALLA G A+ V
Sbjct: 50 REARMDELHLIHLPDYVNRVASTARMEYSCLDPDTDTSPGSYKAALLAAGGLCEAISMVA 109
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNG 197
G A+ALVRPPGHHA+ + G+C NN + + A + ++++ID D+H+GNG
Sbjct: 110 SGKLDNAFALVRPPGHHAEADRSKGFCLFNNVAIGARYAQTALHLQRILIIDWDLHHGNG 169
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T F +L S H P P G DE+G G G+ +N+PL G GD Y
Sbjct: 170 TQHSFETDPSILYFSTHQY-----PYFPGTGACDEVGRRTGLGFTVNVPLSRGYGDGEYA 224
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+++ +F P++I++ G D DP G ++ G+ + R++ +A G
Sbjct: 225 AIFEKILKSIAPEFSPDLILVSAGFDIYGGDPLGGMRVSPKGFAGLTRLIVDIAVSCCSG 284
Query: 318 RLLIVQEGGYHVT 330
++++ EGGY +T
Sbjct: 285 KVVLTLEGGYDLT 297
>gi|428214186|ref|YP_007087330.1| deacetylase [Oscillatoria acuminata PCC 6304]
gi|428002567|gb|AFY83410.1| deacetylase, histone deacetylase/acetoin utilization protein
[Oscillatoria acuminata PCC 6304]
Length = 313
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 167/339 (49%), Gaps = 37/339 (10%)
Query: 14 EGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYI 73
+G+ +V + + L+HDTG+ HPE R+ IV LK P + +
Sbjct: 5 QGLFSVIYSEEFLDHDTGR----------------SHPERPARLTAIVEALKALPWASRL 48
Query: 74 SWHSGIPAQIPQLLS----FHTPDYINEL-VEADKAGGKMVCDGTVLNPGSWGAALLAVG 128
SWH P +LS HTP +I+E+ + A+ GG++ D T ++ S+ ALLAV
Sbjct: 49 SWHLPTPGHQGSVLSAIQRVHTPRHIHEIEILAECGGGRLDID-TPVSRYSYEVALLAVS 107
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
L + V++ G+ A+ L RPPGHHA+ G+C +NA +A AL G +V +
Sbjct: 108 AWLDGVDRVVET-GEPAFVLARPPGHHAESNRGMGFCLFSNAAIAATHALEKHGLQRVAI 166
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
+D DVH+GNGT E ++ ++ SLH P +P G DE G + LN+P+
Sbjct: 167 LDWDVHHGNGTQEIVEKNPQIAYCSLHQY-----PCYPGTGAADETGPYDNI---LNLPV 218
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
P G+ Y V+P + +F+P+++++ G D++A DP R L + Y +
Sbjct: 219 PAGSTLAEYQVLFESKVMPFLNEFQPDLLLVSAGYDANAADPLARIDLQPEDYGILTDYC 278
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
L R G EGGYH+ + + AT+ L L
Sbjct: 279 LQLTRRIVFGL-----EGGYHLDALSKSVIATIARCLEL 312
>gi|448297976|ref|ZP_21488010.1| histone deacetylase [Natronorubrum tibetense GA33]
gi|445592702|gb|ELY46888.1| histone deacetylase [Natronorubrum tibetense GA33]
Length = 342
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 159/313 (50%), Gaps = 26/313 (8%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I LK+ Y+ P I ++ + H +YI E V
Sbjct: 13 DPG-----SRHPESPDRLRAIRERLKKKHGVEYVE---AEPCDIDRMAAVHEREYI-ESV 63
Query: 100 EADKA--GGKMVCDGTVLNPGSWGAALLAVGTTL--SAMKHVLDGHGKIAYALVRPPGHH 155
EA A GG D T + +W A + G + + K +++ RPPGHH
Sbjct: 64 EAFCADGGGNWDPDTTAVEE-TWDAVCYSSGLACWAAEAALEGEAGRKTPFSIGRPPGHH 122
Query: 156 AQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
A A G+CF+NNA +A Q AL+S +V ++D DVH+GNGT + FY + V +S
Sbjct: 123 AVYDDAMGFCFVNNAAVAAQYALDSEDYDVERVAIVDWDVHHGNGTQDIFYDRDDVFFVS 182
Query: 213 LHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFE 272
+H +P G +DE GEG+G G +NIP+P GT D Y+ A+ + A+ ++
Sbjct: 183 IHEK-----GLYPGTGAIDETGEGDGSGTTMNIPMPAGTDDGEYLAAVEGPITTALTDYD 237
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY- 331
P+++++ G D+ DP R L+ + Y M R+LAD + L + EGGY +
Sbjct: 238 PDLLLISAGFDAHRHDPISRIRLSTEAYALMTDRFRTLADE-TDAALAFILEGGYGLDVL 296
Query: 332 --SAYCLHATLEG 342
S +H T +G
Sbjct: 297 ADSVAIVHETFDG 309
>gi|372488624|ref|YP_005028189.1| deacetylase [Dechlorosoma suillum PS]
gi|359355177|gb|AEV26348.1| deacetylase, histone deacetylase/acetoin utilization protein
[Dechlorosoma suillum PS]
Length = 308
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 13/314 (4%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDY 94
F T D ++ HPE R+ I + + PY S++ A + Q+L H+P Y
Sbjct: 6 FITHRDCQLHDMGSYHPECPARLTAISDQMIAQGLDPYFSYYDAPLATLEQMLRAHSPAY 65
Query: 95 INELVEADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
+ L G D T +NP +W AA + G + A+ VL G A+ +RPPG
Sbjct: 66 LERLKRTAPENGIAHLDPDTAMNPHTWTAAQRSAGAGVMAVDLVLKGEATDAFCAIRPPG 125
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HHA+ G+CF+NN +A + AL G +V ++D DVH+GNGT + F +VL +S
Sbjct: 126 HHAERENCMGFCFVNNIAVAARHALEVHGLKRVAIVDFDVHHGNGTEDIFKDDPRVLMVS 185
Query: 213 LHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFE 272
M + P +GT D + N+PLP GTG + ++++ +P + +F
Sbjct: 186 --MFQHPFFPYSGADGTADNM---------CNVPLPAGTGGEDFRMVVSDIWLPRLHEFR 234
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P ++ + G D+ D G L + + + ++++A R+ GR++ + EGGY ++
Sbjct: 235 PELLFISAGFDAHYEDDMGSMKLVESDFAWVTQQLKTVAQRHCQGRIVSMLEGGYVLSSL 294
Query: 333 AYCLHATLEGVLNL 346
A + A L + +L
Sbjct: 295 ARSVCAHLRALADL 308
>gi|328699049|ref|XP_001942623.2| PREDICTED: histone deacetylase 6-like [Acyrthosiphon pisum]
Length = 839
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 171/363 (47%), Gaps = 26/363 (7%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDY 94
FD D HPE RI I+++ ++ + A+ +LL H+ ++
Sbjct: 474 FDLIMDQKHESSESGHPECPGRISAILNMYNEFQLTHRLLILPSREAEESELLLAHSREH 533
Query: 95 INELVEADKAG-----GKMVC-DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYAL 148
++E+ K K C D L ++ + LA G L + V+ A+
Sbjct: 534 VDEMSNLHKLSPSELSEKEKCYDSVYLTTDTYKVSTLASGCLLQVVDSVMKNESASGVAV 593
Query: 149 VRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNK 207
+RPPGHHA+ +A G+C N+ +A ALN G +++++D D+H+GNGT F +
Sbjct: 594 IRPPGHHAELDIACGFCIFNSVAIAASYALNKYGLKRIMILDWDIHFGNGTMRAFSSDPR 653
Query: 208 VLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVP 266
VL IS+H + + G+ G G G GY +NIP NG GD Y+ M +++P
Sbjct: 654 VLYISIHRYQNAKFFPCSEEGSHKVTGSGSGEGYTINIPWNKNGMGDAEYISVMQNIILP 713
Query: 267 AIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGG 326
+F P ++++ G D++ DP G +T + Y + + SLA+ G++++ EGG
Sbjct: 714 VAYEFCPELVLVSAGFDAAVGDPLGGCKVTPECYGHLTHFLSSLAN----GKIILALEGG 769
Query: 327 YHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV-----KVIESIKQYQNDVIP 381
Y++ +YC+ + ALL DP+ P D FP+ K I+ + Q +
Sbjct: 770 YNIDAVSYCMTMCTK-------ALLGDPLP--PLDLEFPICKNAQKTIKRVVNVQKNYWS 820
Query: 382 FLK 384
K
Sbjct: 821 CFK 823
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 26/317 (8%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+PEN R ++I+ G I I A +LL H+ I+ L D
Sbjct: 74 YPENPQRYESIIERCNELGLIERCIKIQCR-NATNDELLMKHSQSIIDILKSTDDIQSVD 132
Query: 109 VC-------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
+ D +P ++ +LLA G+++ +K + + + A +RPPGHHA +
Sbjct: 133 LLQTLSSKFDAIYFHPSTYKQSLLATGSSIELVKAICENKIQNGMAFIRPPGHHAMKSEF 192
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
GYCF NN + + L K++++D DVH+G T + FY +VL S+H HG
Sbjct: 193 CGYCFFNNIAITAEYVLRHYSVSKILIVDWDVHHGQSTQQMFYDDPRVLYFSIHRYEHGQ 252
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMIV 277
+ P+ + D G G+G G+N+N+PL N TG D Y+ ++++P +F+P++I+
Sbjct: 253 FWPN-LRESDWDYTGNGDGQGFNINVPL-NATGMRDTDYLAIFHQILLPVASEFQPDLIL 310
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G D++ P G +T Y +V SL ++ GR+ ++ EGG YCL
Sbjct: 311 ISSGYDAALGCPEGEMEVTPACY---AHLVHSLMG-FACGRVAVLLEGG-------YCLK 359
Query: 338 ATLEGVLNLPLALLSDP 354
+ EG +LL DP
Sbjct: 360 SLAEGAALTLKSLLGDP 376
>gi|354616840|ref|ZP_09034396.1| Histone deacetylase [Saccharomonospora paurometabolica YIM 90007]
gi|353218807|gb|EHB83490.1| Histone deacetylase [Saccharomonospora paurometabolica YIM 90007]
Length = 390
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 159/317 (50%), Gaps = 28/317 (8%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
V WD +L +D G D F+P L++ + R+ + +L P+ +
Sbjct: 6 VVWDPALLAYDLGD---DHPFNPVRLDL-------TVRLATALGVLDDVPLL------AP 49
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCD-GTVLNP---GSWGAALLAVGTTLSAM 134
PA +LL HTP+YI + A AG + GT NP A+ L VG+TL
Sbjct: 50 DPAGETELLRAHTPEYIEAVRRAPMAGHDVGHGLGTPDNPVFVDMHDASALVVGSTLLGA 109
Query: 135 KHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDV 192
+ +++G A + G HHA P A G+C N+ +AV L+ G ++ +D DV
Sbjct: 110 RCLVEGRATRAVGIA---GGLHHAMPGHASGFCVYNDCAVAVSWLLDQGFDRIAYVDTDV 166
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG 252
H+G+G FY +VLT+SLH + + P G E G GE G +N+ LP GTG
Sbjct: 167 HHGDGVQAAFYDDPRVLTVSLHQHPFTL---FPGTGYAAETGAGEADGTAVNVALPPGTG 223
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D G++ A +V +++F P +++ G DS A DP L++DG+R + R +R LAD
Sbjct: 224 DAGWLRAFHAVVPSVLERFRPQILITQCGVDSHAEDPLADLSLSVDGHRRIYRTLRELAD 283
Query: 313 RYSGGRLLIVQEGGYHV 329
++ GR L V GGY +
Sbjct: 284 THADGRWLAVGGGGYQL 300
>gi|412990781|emb|CCO18153.1| histone deacetylase superfamily [Bathycoccus prasinos]
Length = 393
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 149/295 (50%), Gaps = 18/295 (6%)
Query: 41 PGFLEVLEKHPENS-DRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
P LE LE E +R K+ +L P P + +P L H+ +Y+ L
Sbjct: 64 PAILEKLENDSEFFLERKKDQSIVLLENP--PLATVEDLVP------LDIHSQNYMKSLE 115
Query: 100 EADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
K D T + P S+ AAL ++G + + + VL G K +ALVRPPGHHA
Sbjct: 116 FLAKTKAPCQIDASTYMTPSSFEAALASIGASNALVDAVLKGKTKTGFALVRPPGHHAVV 175
Query: 159 TMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
G+C N A AV+ A + KV+V D DVH+GNGT + F + VL +S H
Sbjct: 176 KGPMGFCLFNTAAAAVRYAQTQYPNDIKKVLVYDFDVHHGNGTNDIFAKDPTVLFVSTHE 235
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+ GS+ P G + ++G+ EG G N+N+PLP G G++ + A +V PA ++F+P+
Sbjct: 236 D-GSF----PGTGKISDIGQDEGEGTNINVPLPTGAGEKSVLEAFDLVVEPAARRFQPDF 290
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
IV+ G D+ DP Y + ++ L++ G+++ + EGGY +T
Sbjct: 291 IVVSAGYDAHWRDPLANLNFRSRTYHYLSSRLKKLSEDLCDGKIVFLLEGGYDLT 345
>gi|407777511|ref|ZP_11124780.1| histone deacetylase superfamily protein [Nitratireductor pacificus
pht-3B]
gi|407300760|gb|EKF19883.1| histone deacetylase superfamily protein [Nitratireductor pacificus
pht-3B]
Length = 308
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 141/280 (50%), Gaps = 12/280 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-DKAGGKM 108
HPE DR++ IV L P + Y+ A +L H +++++ A + G
Sbjct: 20 HPERPDRLRVIVDRLDDEPFA-YLDRREAPQADEAAVLLAHPQSHLDKVKAAIPEEGLAR 78
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + T ++P S AAL A+G +A+ V G + RPPGHHA+ T A G+C N
Sbjct: 79 IDEDTTVSPRSLEAALTAIGGATAAVDDVFSGEAANVFVAARPPGHHAEKTRAMGFCLFN 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA +A + A G +V +ID DVH+GNGT + F+ VL S H P +P
Sbjct: 139 NAAIAARHAQQRHGAERVAIIDWDVHHGNGTQDIFWDDPSVLYCSTHQM-----PLYPGG 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G DE G G +N PL G+G + A LV+PAI++F P++IV+ G D+
Sbjct: 194 GARDETGAGN----IVNAPLAAGSGSEAFREAFDTLVLPAIERFAPDLIVISAGFDAHRR 249
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + ++ A+R S GRL+ + EGGY
Sbjct: 250 DPLAEINLEAEDFDWATGVLMERAERLSQGRLVSLLEGGY 289
>gi|389697030|ref|ZP_10184672.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microvirga sp. WSM3557]
gi|388585836|gb|EIM26131.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microvirga sp. WSM3557]
Length = 315
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 144/280 (51%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGKM 108
HPE DRI+ I L++ + + + + A++ L H DYI L + + + G
Sbjct: 22 HPERPDRIRAIERALEKERFTSLVRELAPM-AEMESLTLAHPQDYIVRLRDISPREGLVR 80
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + TV++PG++ AAL G + A+ V+ G A+ +RPPGHHA+ T A G+CF N
Sbjct: 81 IDEDTVMSPGTYEAALRGAGGAVLAVDEVMSGRATNAFVAMRPPGHHAERTRAMGFCFFN 140
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA +A + A G +V + D DVH+GNGT + F+ VL S H P +P
Sbjct: 141 NAAIAARHAQKRYGAERVAIFDWDVHHGNGTQDIFWSDASVLYCSTHE-----APLYPGT 195
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G + E G G +N PL G G + A+ ++P I F P++IV+ G D+
Sbjct: 196 GALSETG---AHGTIVNAPLNAGDGSEAFREAVETAILPRIHDFAPDLIVISAGFDAHWR 252
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + +LA+R+ G R++ V EGGY
Sbjct: 253 DPLASLNLMESDFAWATQKLMALAERHCGQRIVSVLEGGY 292
>gi|41407270|ref|NP_960106.1| hypothetical protein MAP1172c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|440776770|ref|ZP_20955604.1| hypothetical protein D522_07918 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41395622|gb|AAS03489.1| hypothetical protein MAP_1172c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|436723059|gb|ELP46927.1| hypothetical protein D522_07918 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 309
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 136/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ A G +
Sbjct: 20 HPERPDRYRAVAAALSR-PGFDALVRETAEPAELAATRYVHSNRYVDAPEAARPQHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLQAVDRVLAGDVQNAFVACRPPGHHAETERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A T+ VPA+Q F P +I++ G ++
Sbjct: 194 TGAAAETGVGNIF----NSPLAPGDGGAELRAAFTDRFVPALQAFSPELIIVSAGFNAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A++ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFGWVTRELMKSAEKLCDGRLVAVLEGGY 290
>gi|421098612|ref|ZP_15559277.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
gi|410798365|gb|EKS00460.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
Length = 313
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 10/283 (3%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
H E+SDR+ ++ L + S + +P++ H+ ++ ++ + G
Sbjct: 22 HYESSDRLLACLNKLHQTSYFNSLFFPEMKKVPSEF--FNEIHSSAHLQKIERSKGKRGY 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T SW AA A + ++ +L G K ++L+RPPGHHA+ G+C L
Sbjct: 80 FDSD-TPFTEKSWIAAYSAANSGITLADALLSGTIKNGFSLLRPPGHHAEHNRIMGFCML 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + + +G K+ +ID DVH+GNGT E FY+ V +S+H P +P
Sbjct: 139 NNVAITARYLQKNGLKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQ-----FPFYPMT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ EG G NIP+ + ++ Y+ E+V+P ++ F P+++++ G D+
Sbjct: 194 GLSSETGKNEGIGTTKNIPMQANSDNQAYIQKFKEVVIPTMEHFGPDVVLISAGFDAHKE 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G +T G+ ++ +IV A++ G++L EGGY++T
Sbjct: 254 DPLGGMNITTKGFEDLTKIVLESANKICEGKVLSFLEGGYNLT 296
>gi|448579410|ref|ZP_21644606.1| histone deacetylase [Haloferax larsenii JCM 13917]
gi|445723359|gb|ELZ75002.1| histone deacetylase [Haloferax larsenii JCM 13917]
Length = 336
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 160/332 (48%), Gaps = 31/332 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+++ L+HDTG +HPE +DR++ I L + Y+ P
Sbjct: 5 YNESCLDHDTGA----------------RHPETADRLRAIRRGLAKRHGVEYVE---AAP 45
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A + + H DY++E + + GG TV +W AAL + G A + L G
Sbjct: 46 AVKSTVAAVHDDDYVDEFHDFCRGGGGNWDPDTVAVEETWVAALASAGLAEWAARSALSG 105
Query: 141 HG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNG 197
+ ++L RPPGHHA A G+CF NNA +A Q ++ +V + D DVH+GNG
Sbjct: 106 DDGRRTPFSLGRPPGHHAVEDDAMGFCFFNNAAVAAQAVIDDDLAERVAIFDWDVHHGNG 165
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + FY + V S+H + +P G VDE G G LNIPL G GD YV
Sbjct: 166 TQDIFYDRDDVFYTSIHED-----GLYPGTGEVDETGVDGAEGTTLNIPLRAGAGDADYV 220
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
++ E + PA+++F+P++ ++ G D+ DP R ++ +GY + VR L D
Sbjct: 221 YSFEETIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAMLTERVRDLCDDTDTA 280
Query: 318 RLLIVQEGGY---HVTYSAYCLHATLEGVLNL 346
L V EGGY ++ +H T +G L +
Sbjct: 281 -LSFVLEGGYGLDTLSEGVAIVHETFDGRLAM 311
>gi|443306354|ref|ZP_21036142.1| histone deacetylase superfamily protein [Mycobacterium sp. H4Y]
gi|442767918|gb|ELR85912.1| histone deacetylase superfamily protein [Mycobacterium sp. H4Y]
Length = 309
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 135/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVEAAL-RQPRFDALVRETAEPAELAAARYVHSNRYVDALEAARPEHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLRAVDRVLAGDVQNAFVACRPPGHHAESERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A + ++PA+ F P +I++ G D+
Sbjct: 194 TGAARETGVGNIF----NAPLAPGDGGAELRAAFADRILPALHAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A+ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFAWVTRELMKSAETLCDGRLVAVLEGGY 290
>gi|15896999|ref|NP_341604.1| acetylpolyamine aminohydrolase [Sulfolobus solfataricus P2]
gi|284173848|ref|ZP_06387817.1| acetylpolyamine aminohydrolase [Sulfolobus solfataricus 98/2]
gi|384433499|ref|YP_005642857.1| histone deacetylase [Sulfolobus solfataricus 98/2]
gi|13813158|gb|AAK40394.1| Acetylpolyamine aminohydrolase [Sulfolobus solfataricus P2]
gi|261601653|gb|ACX91256.1| Histone deacetylase [Sulfolobus solfataricus 98/2]
Length = 351
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 153/283 (54%), Gaps = 13/283 (4%)
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHV 137
IP + QL+ H+ +YI + K G + DG T G + AAL+ V ++ A++
Sbjct: 52 IPEEALQLV--HSKEYIEFVKYKSKEGQGYLDDGDTPAFKGIYEAALIRVSGSVKALE-- 107
Query: 138 LDGHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
L G+ + + G HHA+ A G+C N+ L +L S ++ ++DID H+ +
Sbjct: 108 LIKSGEFNHTINIGGGFHHAKRNRAAGFCVFNDVALISKLG-ESFFSRIAIVDIDGHHAD 166
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT E N +L ISLHM H ++ P G V+E+G G+G GY +NIPLP GTGD GY
Sbjct: 167 GTQELLIDDNNILKISLHMFHPNFFPG---TGDVNEIGLGKGEGYTINIPLPPGTGDDGY 223
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ A E+VVPAI++++P +I+LV G DS DP L+ GY ++ + L YS
Sbjct: 224 LLAFDEIVVPAIERYKPELIILVAGGDSHFNDPLVELKLSTHGYLDVVTKIHRLVHEYSN 283
Query: 317 GRLLIVQEGGYHVTYSAYCLH---ATLEGVLNLPLALLSDPIA 356
GRL+++ GGY+ +A A + G+ +L L D +
Sbjct: 284 GRLIMLGGGGYNYDATARIWTISIAEIAGIYDLEYETLHDSFS 326
>gi|156050425|ref|XP_001591174.1| hypothetical protein SS1G_07799 [Sclerotinia sclerotiorum 1980]
gi|154692200|gb|EDN91938.1| hypothetical protein SS1G_07799 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 778
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 165/304 (54%), Gaps = 29/304 (9%)
Query: 87 LSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAY 146
LS T + + EL AG K + G ++ AAL++ G + K+V++GH K A
Sbjct: 176 LSKKTSEDLRELNTIMDAGRKSLYVGLC----TFEAALISAGGAIETCKNVVEGHVKNAI 231
Query: 147 ALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL---NSGCGKVVVIDIDVHYGNGTAEGFY 203
A++RPPGHHA+ + G+C NN +A ++ + C KV+++D D+H+GNGT FY
Sbjct: 232 AVIRPPGHHAEANESLGFCVFNNVPVAAKICMLDYPKLCRKVLILDWDIHHGNGTQNMFY 291
Query: 204 RSNKVLTISLHM-NHGSWGPSHPQ-----NGTVDELGEGEGFGYNLNIPLPN-GTGDRGY 256
VL ISLH+ +G++ P P +G +D++G G G G N+NI P+ G GD Y
Sbjct: 292 EDPNVLYISLHVYENGNFYPGQPDDPDLPDGGIDKVGTGAGIGKNVNIGWPSQGMGDGEY 351
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ A ++V+P Q+F+P+++++ G D++A D G +T Y M ++ SLA G
Sbjct: 352 MAAFQKIVMPIAQEFDPDLVIISAGFDAAAGDELGGCFVTPGCYSHMTHMLMSLA----G 407
Query: 317 GRLLIVQEGGYH---VTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIK 373
G++ + EGGY+ ++ SA + TL G + PI P +V E +K
Sbjct: 408 GKVAVCLEGGYNLKAISRSALAVAKTLMGE-----PPIRQPI---PPLNRVAAEVFEEVK 459
Query: 374 QYQN 377
YQ+
Sbjct: 460 YYQS 463
>gi|440756205|ref|ZP_20935406.1| histone deacetylase domain protein [Microcystis aeruginosa TAIHU98]
gi|440173427|gb|ELP52885.1| histone deacetylase domain protein [Microcystis aeruginosa TAIHU98]
Length = 305
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 158/335 (47%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVEALKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPIEIRDEVIPLIKQVHNQDYVDRLRRICQRGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPLP+
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLPS 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|392569749|gb|EIW62922.1| histone deacetylase complex protein [Trametes versicolor FP-101664
SS1]
Length = 679
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 164/321 (51%), Gaps = 35/321 (10%)
Query: 50 HPENSDRIKNIVSIL---------KRGPISPYISWHSGI---PAQIPQLLSFHTPDYINE 97
H E +RI I IL KR PI + + + A ++L+ H+
Sbjct: 72 HCEQPERISRIFDILNQNDCLKKMKRLPIRRVLREEALLVHSQALWDKVLALHS------ 125
Query: 98 LVEADKAGGKMVCDGTVL--NPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
L + D A + + L +P + AA L+ G + A V G K A+A+VRPPGHH
Sbjct: 126 LTDQDIADSEAYYNDLSLYVHPTTPYAAQLSAGGVIEATLAVARGEVKKAFAIVRPPGHH 185
Query: 156 AQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A+P G+CF NN +A ++ L S +++++D DVH+GNGT FY VL ISLH
Sbjct: 186 AEPDEHMGFCFFNNVSIAAKVVQLKSTLKRILILDWDVHHGNGTQRAFYDDPSVLYISLH 245
Query: 215 MNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFE 272
G++ P+ P G++ GEG G GY++NIP P G GD Y+ A ++V+P +F
Sbjct: 246 RYEGGNFYPNGP-FGSMTSCGEGAGLGYSVNIPWPEKGMGDADYILAFQKIVMPIALEFS 304
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P+++++ G D++ D G ++ GY M ++ SLA GG+L++ EGG
Sbjct: 305 PDLVIISAGFDAAEGDDLGECHVSPAGYAHMTHMLSSLA----GGKLVVALEGG------ 354
Query: 333 AYCLHATLEGVLNLPLALLSD 353
YCL A L + +L +
Sbjct: 355 -YCLDAIAASALAVTRVVLGE 374
>gi|195566858|ref|XP_002106992.1| HDAC6 [Drosophila simulans]
gi|194204389|gb|EDX17965.1| HDAC6 [Drosophila simulans]
Length = 777
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 140/250 (56%), Gaps = 11/250 (4%)
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
D AG V + L+P ++ A+LA G+ L A+ VL G + VRPPGHHA+
Sbjct: 260 DAAG---VYNSVYLHPRTFDCAVLAAGSVLQAVDSVLRGESRSGICNVRPPGHHAEQDHP 316
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A Q A+ G +V+++D DVH+GNGT F + KVL ISLH HGS
Sbjct: 317 HGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGS 376
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P +G D +G+G G G+N+NIP G GD Y A +LV+P +F P ++++
Sbjct: 377 FFPKGP-DGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLVMPIAYEFNPQLVLV 435
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G +T +GY + + +LA GR+++ EGGY+V +Y +
Sbjct: 436 SAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTM 491
Query: 339 TLEGVLNLPL 348
+ +L P+
Sbjct: 492 CTKTLLGDPV 501
>gi|448610849|ref|ZP_21661483.1| histone deacetylase [Haloferax mucosum ATCC BAA-1512]
gi|445743281|gb|ELZ94762.1| histone deacetylase [Haloferax mucosum ATCC BAA-1512]
Length = 337
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 15/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE +DR++ I L + Y+ PA+ + + H Y++E + ++GG
Sbjct: 17 RHPETADRLRAIRRGLAKRHGVEYVE---AAPAEKSTVAAVHEDAYVDEFHDFCRSGGGN 73
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCF 166
TV SW AAL + G A + LDG ++L RPPGHHA A G+CF
Sbjct: 74 WDPDTVAVEQSWVAALASAGLAEWAARTALDGDDGRDTPFSLGRPPGHHAVEDDAMGFCF 133
Query: 167 LNNAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
NNA +A Q ++ G +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 134 FNNAAVAAQAVIDDGLAERVAIFDWDVHHGNGTQDIFYDRDDVFYASIHED-----GLYP 188
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G ++E GE G LN+PL G GD YV++ E + PA+++F+P++ ++ G D+
Sbjct: 189 GTGELEETGESGAEGTTLNVPLRAGAGDADYVYSFEEAIAPAVERFDPDLFIVSAGFDAH 248
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY + VR L D + + V EGGY ++ +H T +G
Sbjct: 249 RHDPISRMRVSTEGYAMLTAHVRKLCDD-TDAAIAFVLEGGYGLDTLSEGVAIVHETFDG 307
>gi|406031433|ref|YP_006730324.1| Histone deacetylase 14 [Mycobacterium indicus pranii MTCC 9506]
gi|405129980|gb|AFS15235.1| Histone deacetylase 14 [Mycobacterium indicus pranii MTCC 9506]
Length = 309
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 135/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVEAAL-RQPRFDALVRETAEPAELAATRYVHSNRYVDALEAARPEHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLRAVDRVLAGDVQNAFVACRPPGHHAESERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A + ++PA+ F P +I++ G D+
Sbjct: 194 TGAARETGVGNIF----NAPLAPGDGGAELRAAFADRILPALHAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A+ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFAWVTRELMKSAEMLCDGRLVAVLEGGY 290
>gi|379747895|ref|YP_005338716.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare ATCC 13950]
gi|379755200|ref|YP_005343872.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare MOTT-02]
gi|378800259|gb|AFC44395.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare ATCC 13950]
gi|378805416|gb|AFC49551.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare MOTT-02]
Length = 309
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 135/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVEAAL-RQPRFDALVRETAEPAELAAARYVHSNRYVDALEAARPEHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLRAVDRVLAGDVQNAFVACRPPGHHAESERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A + ++PA+ F P +I++ G D+
Sbjct: 194 TGAARETGVGNIF----NAPLAPGDGGAELRAAFADRILPALHAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A+ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFAWVTRELMKSAEMLCDGRLVAVLEGGY 290
>gi|336253185|ref|YP_004596292.1| histone deacetylase superfamily [Halopiger xanaduensis SH-6]
gi|335337174|gb|AEH36413.1| histone deacetylase superfamily [Halopiger xanaduensis SH-6]
Length = 342
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE DR++ I LK+ Y+ P I + + H +Y+ +
Sbjct: 13 DPG-----SRHPETPDRLRAIRERLKKKHGVEYVD---ADPVDIDTIAAVHDREYVESVE 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
+ GG T +W A + G A++ L+G K +++ RPPGHHA
Sbjct: 65 QFCADGGGDWDPDTSAVAETWDAIRHSSGLACWAVEAALEGATGRKTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NNA +A Q AL+ +V V+D DVH+GNGT + FY V +S+H
Sbjct: 125 VDDAMGFCFVNNAAVAAQHALDHDEYDIDRVAVVDWDVHHGNGTQDIFYEREDVFFVSIH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G +DE+GEG+G G +NIP+P GTGD Y+ A + A++ + +
Sbjct: 185 EK-----GLYPGTGAIDEIGEGDGHGTTMNIPMPAGTGDEAYLAAAEGPIATALEAHDID 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y + +R++AD L V EGGY +
Sbjct: 240 LLLVSAGFDAHRHDPISRIRLSTEAYALLTDRLRTIADNCDAA-LAFVLEGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVAMVHETFDG 309
>gi|379762732|ref|YP_005349129.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare MOTT-64]
gi|378810674|gb|AFC54808.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare MOTT-64]
Length = 309
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 135/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + + L R P + + PA++ H+ Y++ L A G +
Sbjct: 20 HPERPDRYRAVEAAL-RQPRFDALVRETAEPAELAAARYVHSNRYVDALEAARPEHGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W AL VG TL A+ VL G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWETALRGVGATLRAVDRVLAGDVQNAFVACRPPGHHAESERAMGFCLF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A G +V ++D DVH+GNGT + FY VL S H P P
Sbjct: 139 NNISIGARHAQRKHGLMRVAIVDFDVHHGNGTQQIFYSDPNVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G F N PL G G A + ++PA+ F P +I++ G D+
Sbjct: 194 TGAARETGVGNIF----NAPLAPGDGGAELRAAFADRILPALHAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A+ GRL+ V EGGY
Sbjct: 250 RDPLGSLTMTTDDFAWVTRELMKSAEMLCDGRLVAVLEGGY 290
>gi|40062660|gb|AAR37581.1| histone deacetylase family protein [uncultured marine bacterium
313]
Length = 307
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 152/307 (49%), Gaps = 28/307 (9%)
Query: 23 DGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQ 82
D LNHDTG+G HPE +DR+ +++ LK+ S + W
Sbjct: 9 DTYLNHDTGQG----------------HPERADRVTVVINHLKKIK-SKSLIWKKATKFD 51
Query: 83 IPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
+ L H +Y+N + ++ G DG T+++PGS A AVG+ L+A+ V+
Sbjct: 52 LKYLEFAHDENYLNNVKDSFPKQGLNFLDGDTIVSPGSKEATRDAVGSILTAIDGVMKKD 111
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGL-AVQLALNSGCGKVVVIDIDVHYGNGTAE 200
A+ VRPPGHHA+ A G+C NN + A L KV +ID DVH+GNGT +
Sbjct: 112 LDNAFCAVRPPGHHAEKQKAMGFCVYNNIAVGAYYLLEKYKLKKVAIIDFDVHHGNGTQD 171
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
FY + KVL IS H P +P +G +E G + LN+PL GT +++A
Sbjct: 172 IFYDNEKVLYISSHQY-----PYYPGSGAANEKGSKDNV---LNVPLSAGTQSHEFLNAY 223
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+ + ++ F+P I+L G D+ DP + L Y + + + SLA G+++
Sbjct: 224 -DSIFKKLKTFKPEFILLSAGFDAHKDDPLAQINLESKDYYTLTKRILSLAKELCDGKVV 282
Query: 321 IVQEGGY 327
+ EGGY
Sbjct: 283 SILEGGY 289
>gi|150864507|ref|XP_001383345.2| hypothetical protein PICST_71431 [Scheffersomyces stipitis CBS
6054]
gi|149385763|gb|ABN65316.2| histone deacetylase A [Scheffersomyces stipitis CBS 6054]
Length = 807
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 161/310 (51%), Gaps = 28/310 (9%)
Query: 43 FLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSFH 90
+ E ++ HPE+ RI I L I P + A ++L H
Sbjct: 121 YFEYIDPHPEDPRRIYRIYKKLAEAGLIVDSSLSGVEDIGPLMVKIPIREATAEEILEVH 180
Query: 91 TPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
+ ++ + + + + D +N S+ +A L+ G T+ A K V++G K
Sbjct: 181 SESHLKFIQSTETMSRERLLEETEKGDSIYVNNDSYFSAKLSCGGTIEACKAVIEGRVKN 240
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEG 201
+ A+VRPPGHHA+P G+C +N +A + L + K+V++D D+H+GNGT +
Sbjct: 241 SLAIVRPPGHHAEPETPGGFCLFSNVAVAAKNILKAYPESVRKIVIVDWDIHHGNGTQKS 300
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
FY +VL ISLH +G + P + G D++GE +G GYNLNIP N G D Y++A
Sbjct: 301 FYDDPRVLYISLHRYENGRFYPG-TKYGGADQVGEKDGEGYNLNIPWRNPGMHDGDYIYA 359
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+V+P I +F+P++I++ G D++ D G +T GY M +++ +A G+L
Sbjct: 360 FNRVVLPVILEFDPDLIIVSSGFDAADGDIIGGCHVTPAGYGYMTHLLKGIAK----GKL 415
Query: 320 LIVQEGGYHV 329
++ EGGY++
Sbjct: 416 AVILEGGYNL 425
>gi|448384118|ref|ZP_21563116.1| histone deacetylase [Haloterrigena thermotolerans DSM 11522]
gi|445659107|gb|ELZ11919.1| histone deacetylase [Haloterrigena thermotolerans DSM 11522]
Length = 344
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I L++ Y+ P + + + H +Y+ +
Sbjct: 13 DPG-----SRHPESPDRLRAIRKRLQKKHGVEYVE---ADPCDLDAMATVHEREYLESVR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E GG T +W AA + G A + L+G + +++ RPPGHHA
Sbjct: 65 EFCADGGGSWDPDTTAVEETWDAASRSAGLACWAAEEALEGATGRETPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSGC---GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NN +A Q AL+ +V +ID DVH+GNGT + FY V +SLH
Sbjct: 125 YDNAMGFCFVNNVAVAAQHALDHDAYDVDRVAIIDWDVHHGNGTQDIFYDRGDVFFVSLH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P +G +DE G G+G G +NIP+P GT D Y+ A+ + A+ F+P+
Sbjct: 185 EQ-----GLYPGSGDIDETGAGDGEGTTMNIPMPAGTDDGEYLAAVDGPIAAALTDFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y + VR+LA+ + L + EGGY +
Sbjct: 240 LLLISAGFDAHRHDPISRIRLSTEAYALLSDRVRTLAED-TDAALAFILEGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVAMVHETFDG 309
>gi|448655001|ref|ZP_21681853.1| acetoin utilization protein [Haloarcula californiae ATCC 33799]
gi|445765450|gb|EMA16588.1| acetoin utilization protein [Haloarcula californiae ATCC 33799]
Length = 335
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 16/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK Y++ A + + + H DYI E E D GG
Sbjct: 17 RHPESPDRLRAIRRALKENHGVEYVA---ADDADLDLVRAVHDTDYIAEFREFCDDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D TV +W AAL + G + A + LDG+ ++L RPPGHHA A G+C
Sbjct: 74 WDAD-TVAVEETWDAALASAGLAVWAAEAALDGNTGRDTPFSLGRPPGHHAVGDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F+NNA +A Q AL + +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 133 FINNAAVAAQAALEADADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHED-----GLYP 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + E G G+ G NLN+ G Y+ A+ E + PAI+ ++P+++++ G D+
Sbjct: 188 GTGDISETGTGDADGTNLNVKYKPGADTADYLAAIDECIAPAIRDYDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY M +RSL D L I+ EGGY ++ S +H +G
Sbjct: 248 EHDPISRMRVSTEGYGAMTDRMRSLTDACDAA-LGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|388582703|gb|EIM23007.1| hypothetical protein WALSEDRAFT_59725 [Wallemia sebi CBS 633.66]
Length = 697
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 131/220 (59%), Gaps = 10/220 (4%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+NP + AALL+ G+ L K V D + +A+VRPPGHHA+P G+ F NNA +A
Sbjct: 148 VNPMTTYAALLSAGSLLELTKAVCDERIRNGFAIVRPPGHHAEPEQMMGFSFFNNASIAA 207
Query: 175 QLALN---SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTV 230
+ A + +V+++D DVH+GNGT FY VL ISLH +G++ P G +
Sbjct: 208 RWAQKNYPNSVKRVLILDWDVHHGNGTQRAFYDDPSVLYISLHRYENGTFYPGS-DFGGM 266
Query: 231 DELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
+ G G G G+++NIP P+ G GD Y+ A ++V+P Q+F P+++++ G D++ DP
Sbjct: 267 NMTGSGAGEGFSVNIPWPHAGMGDPEYLQAFNQVVMPISQEFAPDLVIISAGYDAAINDP 326
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
G +T GY +M + SLA GG++++ EGGY++
Sbjct: 327 LGENLITPLGYAQMTHQLSSLA----GGKMVVALEGGYNL 362
>gi|76800813|ref|YP_325821.1| histone deacetylase [Natronomonas pharaonis DSM 2160]
gi|76556678|emb|CAI48250.1| HdaI-type histone deacetylase [Natronomonas pharaonis DSM 2160]
Length = 336
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 155/308 (50%), Gaps = 32/308 (10%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTG +HPE +DR++ I LKR + + G A+
Sbjct: 10 LEHDTGS----------------RHPETADRLRAIRRGLKR---RHGVEYRDGRLAERDA 50
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHG-- 142
+ + H DY+ + +EA A G D TV +W AAL + G A+ + G
Sbjct: 51 IEAVHDADYVAD-IEAFMADGGGTWDADTVAVEETWEAALASAGLASWAVDEAIGGADGR 109
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTA 199
+ +A+ RPPGHHA+ A G+CF NNA +AVQ AL+ SG V+ D DVH+GNGT
Sbjct: 110 QTPFAIGRPPGHHAEIDEAMGFCFFNNAAVAVQQALDAEDSGVDSAVIFDWDVHHGNGTQ 169
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHA 259
+ FY S+ V S+H G + P G V E G + LN+PLP G+GD Y
Sbjct: 170 DIFYDSDDVFYASIH-ERGLF----PGTGDVLETGGPDARNTILNVPLPGGSGDAEYRAV 224
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
M +L+ PA+ +FEP++ V+ G D+ DP R +T +GY + VR +A + L
Sbjct: 225 MEQLLRPALDRFEPDLFVVSAGFDAHKHDPISRMRVTTEGYGYLTATVRDIAADHDAP-L 283
Query: 320 LIVQEGGY 327
V EGGY
Sbjct: 284 AFVLEGGY 291
>gi|428309307|ref|YP_007120284.1| deacetylase [Microcoleus sp. PCC 7113]
gi|428250919|gb|AFZ16878.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microcoleus sp. PCC 7113]
Length = 305
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 155/335 (46%), Gaps = 35/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
++ V + D LNHD G+ HPE +R+ IV+ LK P + + W
Sbjct: 1 MLPVIYSDQFLNHDNGR----------------FHPERPERLTAIVNALKAAPWADKLEW 44
Query: 76 HSGIPAQ----IPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
P + +P L H P YI + E +GG M+ T ++P S+ ALLAV L
Sbjct: 45 QLPTPVETRSVMPLLQQIHAPLYIERVREIATSGGGMLDADTAISPRSYDVALLAVSAWL 104
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDI 190
+ VL A+ L RPPGHHA+ G+C +NA +A AL G +V ++D
Sbjct: 105 DGVDRVL-ATDNPAFVLARPPGHHAERERGMGFCLFSNAAIAAYYALKQPGIHRVGILDW 163
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT + ++ SLH + P +P G E G + LN+P+P G
Sbjct: 164 DVHHGNGTQDIVESDAQIAYCSLHQH-----PCYPGTGQASERGLYKNV---LNLPMPPG 215
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
+ Y + ++P + F+P+++++ G D++ DP L + + L
Sbjct: 216 STVANYQPMFEQKILPFFRDFQPDLLIISAGYDATGDDPLAGIALNPQDFGLFTQSCLQL 275
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
R+L EGGYH+T A + AT+E L
Sbjct: 276 TR-----RILFGLEGGYHLTALAQSVVATIESCLT 305
>gi|288960068|ref|YP_003450408.1| histone deacetylase-like amidohydrolase [Azospirillum sp. B510]
gi|288912376|dbj|BAI73864.1| histone deacetylase-like amidohydrolase [Azospirillum sp. B510]
Length = 310
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 149/315 (47%), Gaps = 28/315 (8%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+F HDTG G HPE +R+ + +L R P + S
Sbjct: 5 IFTHHDCFAHDTGPG----------------HPEAPERLAVVWQVLDR-PEFRGLERRSA 47
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDG--TVLNPGSWGAALLAVGTTLSAMKH 136
A + QL H Y+ ++ A G DG T+L+PGS GA L A G+ +A+
Sbjct: 48 PEADVEQLSRVHERSYVEAVLAAVPTDGYQRLDGGDTLLSPGSRGAILRAAGSVCAAVDA 107
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYG 195
VL G A+ VRP GHHA+P A G+C NN + + A G +V V+D DVH+G
Sbjct: 108 VLGGEAANAFCAVRPCGHHAEPARAMGFCVFNNIAVGAEHARKVHGLTRVAVVDFDVHHG 167
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGT F + S H + P +P G E G G LN+PL +G
Sbjct: 168 NGTQAMFADDPDLFFASTHQS-----PLYPGTGNSWERGVD---GNILNLPLEPYSGSVE 219
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
+ A+ +++PA++ F+P ++++ G D+ DP + LT + + + R + LADR
Sbjct: 220 FRQAVERVILPALEAFQPELLLISAGFDAHKRDPLAQLGLTAEDFEWVTRKLVELADRLC 279
Query: 316 GGRLLIVQEGGYHVT 330
GGR++ EGGY T
Sbjct: 280 GGRVVSALEGGYDAT 294
>gi|325111079|ref|YP_004272147.1| histone deacetylase superfamily protein [Planctomyces brasiliensis
DSM 5305]
gi|324971347|gb|ADY62125.1| histone deacetylase superfamily [Planctomyces brasiliensis DSM
5305]
Length = 579
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 130/238 (54%), Gaps = 21/238 (8%)
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
T ++ ++ AA AV TTL+ VL+G ++AY+LVRPPGHHA+ + G+C+ NNA +
Sbjct: 354 TPIHQNAYKAARRAVETTLTMADAVLEG-ARLAYSLVRPPGHHAESRLFGGFCYFNNAAV 412
Query: 173 AVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ-NGTVD 231
A Q S G+V ++DID H+GNG E FY N V T+SL HG ++P +G D
Sbjct: 413 AAQYF--SRFGRVAILDIDYHHGNGQQEIFYERNDVFTVSL---HGDPQFAYPYFSGFAD 467
Query: 232 ELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNG 291
E G G+G +NLN+PL Y+ A+ V I++F+P +++ +G D + DP G
Sbjct: 468 EQGFGQGLRFNLNLPLQENLTPESYLQALF-FAVKQIEEFDPQFLIVALGLDPAKGDPTG 526
Query: 292 RQCLTMDGYREMGRIVRSLADRYSGGRL----LIVQEGGYHVTYSAYCLHATLEGVLN 345
L + GR++ GRL L+VQEGGY C +G+LN
Sbjct: 527 TWSLLPRDFAANGRLI---------GRLNLPTLVVQEGGYRTRSMGACARHFFQGLLN 575
>gi|254502225|ref|ZP_05114376.1| Histone deacetylase family, putative [Labrenzia alexandrii DFL-11]
gi|222438296|gb|EEE44975.1| Histone deacetylase family, putative [Labrenzia alexandrii DFL-11]
Length = 314
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 148/292 (50%), Gaps = 15/292 (5%)
Query: 41 PGFLEVLEK--HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
P +L+ L HPE DRI+ I IL+ + I A + + H YI++L
Sbjct: 14 PTYLDHLTPVGHPERPDRIRAIDRILEHEKFQSVERDLAPIGA-LEDIARAHPMAYIDQL 72
Query: 99 --VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA 156
+ D+ ++ D T ++PG+W AAL VG A+ VL A++ RPPGHHA
Sbjct: 73 HRLSPDEGVARVDAD-TTMSPGTWEAALRGVGGACRAVDEVLTKKVNNAFSASRPPGHHA 131
Query: 157 QPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
+ A G+CF NNA +A + A G +V +ID DVH+GNGT + F+ V+ S H
Sbjct: 132 EKDRAMGFCFFNNAAVAARYAQEKYGIDRVAIIDFDVHHGNGTQDIFWDDPSVMYCSTHQ 191
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
P +P +G E GE +N+PLP G G+ A +++P + F P +
Sbjct: 192 M-----PLYPGSGDASETGEANTI---VNVPLPPGENGAGFKEAFEVILLPRLDGFAPEL 243
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+++ G D+ A DP G L + R + +AD++S GR++ V EGGY
Sbjct: 244 VIISAGFDAHARDPLGGLNLVEADFAWATRALMDVADKHSDGRVVSVLEGGY 295
>gi|357116448|ref|XP_003559993.1| PREDICTED: histone deacetylase 5-like [Brachypodium distachyon]
Length = 709
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 188/391 (48%), Gaps = 56/391 (14%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSIL------KRGPIS 70
+ + +D+ M H T G + HPEN +R++ I L +R I
Sbjct: 23 VGLLYDERMCAHATPDGKY--------------HPENPERLRAIWKKLGEQGVAERCVIM 68
Query: 71 P-------YI-SWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGA 122
P YI S HS ++ + +S +Y + + ++ + N GS +
Sbjct: 69 PAKEAKDKYIASVHSSTHVKLMKSISSKEHNYRRKNLASNY-------NSIYFNEGSSES 121
Query: 123 ALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-- 180
A LA G+ + + V G A ALVRPPGHHA+ G+C NN +A LN
Sbjct: 122 AFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEPMGFCLFNNVAIAANYLLNERP 181
Query: 181 --GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGE 237
G K++++D DVH+GNGT + FY ++VL S+H +HG++ PS + + +GEG+
Sbjct: 182 DLGIKKILIVDWDVHHGNGTQKMFYNDSRVLFFSVHRFDHGAFYPSQ-GDASHCFIGEGD 240
Query: 238 GFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLT 296
G GYN+N+P + G GD Y+ A +++P + F+P++I+L G D++ DP G +T
Sbjct: 241 GQGYNINVPWNHGGCGDADYIAAWDHVLLPVAEAFDPDIILLSAGFDAARGDPLGGCDVT 300
Query: 297 MDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
DGY R++ L ++ GR+++ EGGY+ A VL LL D
Sbjct: 301 PDGY---ARLLTKLLG-FAKGRMVMALEGGYNTVSIA-------NSVLFCAKVLLGDQFR 349
Query: 357 YY-PEDEAFPV--KVIESIKQYQNDVIPFLK 384
P+D F VI+ ++ P L+
Sbjct: 350 LKPPKDSPFDSTWNVIKEVRDELKTCWPVLR 380
>gi|374998259|ref|YP_004973758.1| putative deacetylase; histone deacetylase superfamily [Azospirillum
lipoferum 4B]
gi|357425684|emb|CBS88580.1| putative deacetylase; histone deacetylase superfamily [Azospirillum
lipoferum 4B]
Length = 309
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 154/329 (46%), Gaps = 27/329 (8%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+F HDTG G HPE DR+ + +L R P + S
Sbjct: 5 IFTHHDCFAHDTGPG----------------HPEAPDRLAVVWQVLDR-PEFRALERRSA 47
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHV 137
A + QL H Y+ ++ A G DG T+L+PGS GA L A G+ +A+ V
Sbjct: 48 PKADVDQLSRVHDRQYVEAVLAAVPDEGYRRLDGDTLLSPGSRGAILRAAGSVCAAVDAV 107
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGN 196
L G A+ VRP GHHA+P A G+C NN + + A G +V V+D DVH+GN
Sbjct: 108 LAGEATNAFCAVRPCGHHAEPARAMGFCVFNNIAVGAEHARKIHGLTRVAVVDFDVHHGN 167
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT F + S H + P +P G E G G LN+PL +G +
Sbjct: 168 GTQAMFADDPDLFFASTHQS-----PLYPGTGNSWERGVD---GNILNLPLEPYSGSVEF 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
A+ ++PA++ F+P ++++ G D+ DP + LT + + + R + LADR G
Sbjct: 220 RQAVERAILPALEAFQPELLLISAGFDAHKRDPLAQLGLTNEDFEWVTRKLVDLADRVCG 279
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
GR++ EGGY T A A L+ ++
Sbjct: 280 GRVVSALEGGYDATGLAEGCAAHLKALMR 308
>gi|55378980|ref|YP_136830.1| acetoin utilization protein [Haloarcula marismortui ATCC 43049]
gi|55231705|gb|AAV47124.1| acetoin utilization protein [Haloarcula marismortui ATCC 43049]
Length = 335
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 155/300 (51%), Gaps = 16/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK Y++ + A + + + H DYI E E D GG
Sbjct: 17 RHPESPDRLRAIRRALKENHGVEYVAADN---ADLDLVRAVHDTDYIAEFREFCDDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D TV +W AAL + G + A + LDG+ ++L RPPGHHA A G+C
Sbjct: 74 WDAD-TVAVEETWDAALASAGLAVWAAEAALDGNTGRDTPFSLGRPPGHHAVGDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F+NNA +A Q AL + +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 133 FINNAAVAAQAALEADADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHED-----GLYP 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + E G G+ G NLN+ G Y+ A+ E + PAI+ ++P+++++ G D+
Sbjct: 188 GTGDISETGTGDADGTNLNVKYKPGADTADYLAAIDECIAPAIRDYDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY M +RSL D L I+ EGGY ++ S +H +G
Sbjct: 248 EHDPISRMRVSTEGYGAMTDRMRSLTDACDAA-LGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|384248416|gb|EIE21900.1| Arginase/deacetylase [Coccomyxa subellipsoidea C-169]
Length = 381
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 178/389 (45%), Gaps = 36/389 (9%)
Query: 15 GIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYIS 74
GII+ +G H +G L E H E R+ +I+ L ++P
Sbjct: 3 GIIDQSPANGTGVHHSGDPLLVYAVSASRGHDWEGHYECGKRMTSILDALASHGLTPAKH 62
Query: 75 WHSGI------PAQIPQLLSFHTPDYINELVEADKAGGKMVC----------DGTVLNPG 118
H + PA L HT ++I ++ + KA + C + T +
Sbjct: 63 SHEIVELQGINPASETDLELVHTTEHITKMRQ--KALEEAPCVVADFEEPADNVTYMTKT 120
Query: 119 SWGAALLAVGTTLSAMKHVL----DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
S+ AL +G ++ + V DG G + L+RPPGHHA G+C NN +A
Sbjct: 121 SYEDALKGIGIAVTLVDQVAAAGKDGKGTKGFGLIRPPGHHATTDAPIGFCLFNNVAIAA 180
Query: 175 QLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDEL 233
+ A G KV+++D DVH+GNGT + FY VL I +H W P +G VDE
Sbjct: 181 RHAQERCGLKKVLIVDFDVHHGNGTQDIFYEDPSVLFIDVH-QLDVW----PGSGQVDET 235
Query: 234 GEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQ 293
G+G G +N+PLP +GD + + ++ PA ++F P++I++ G D+ DP +
Sbjct: 236 GKGAGQKGTINVPLPIASGDEVAGNCLKRIIAPAARRFAPDIILISAGFDAHWRDPLEQL 295
Query: 294 CLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSD 353
Y ++ +R LAD GGRL+++ EGG Y + EGV ALL
Sbjct: 296 NFQSATYHKLVSGIRDLADELCGGRLVVLLEGG-------YSMQGLSEGVCETFQALLKR 348
Query: 354 PIAYYPEDEAFPVKVIESIKQYQNDVIPF 382
P +P D P + +++ + +DV+
Sbjct: 349 P-PLHPHDADVPSEPLQAAQLALDDVVSL 376
>gi|448637991|ref|ZP_21676042.1| acetoin utilization protein [Haloarcula sinaiiensis ATCC 33800]
gi|445763877|gb|EMA15051.1| acetoin utilization protein [Haloarcula sinaiiensis ATCC 33800]
Length = 335
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 16/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK Y++ A + + + H DYI E E D GG
Sbjct: 17 RHPESPDRLRAIRRALKENHGVEYVA---ADDADLDLVRAVHDTDYIAEFREFCDDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D TV +W AAL + G + A + LDG+ ++L RPPGHHA A G+C
Sbjct: 74 WDAD-TVAVEETWDAALASAGLAVWAAEAALDGNTGRDTPFSLGRPPGHHAVGDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F+NNA +A Q AL + +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 133 FINNAAVAAQAALEADADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHED-----GLYP 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G + E G G+ G NLN+ G Y+ A+ E + PAI+ ++P+++++ G D+
Sbjct: 188 GTGDISETGTGDADGTNLNVKYKPGADTADYLAAIDECIAPAIRDYDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY M +RSL D L I+ EGGY ++ S +H +G
Sbjct: 248 EHDPISRMRVSTEGYGAMTDRMRSLTDACDAA-LGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|15789452|ref|NP_279276.1| acetoin utilization protein [Halobacterium sp. NRC-1]
gi|169235167|ref|YP_001688367.1| histone deacetylase [Halobacterium salinarum R1]
gi|10579782|gb|AAG18756.1| acetoin utilization protein [Halobacterium sp. NRC-1]
gi|167726233|emb|CAP13013.1| HdaI-type histone deacetylase [Halobacterium salinarum R1]
Length = 338
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 158/310 (50%), Gaps = 22/310 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPY-ISWHSGIPAQIPQLLSFHTPDYINEL 98
DPG +HPE+ DR++ I KRG + +++ A + + + H PDY E+
Sbjct: 13 DPGV-----RHPESPDRLRAI----KRGLQKRHGVTYEDAPDADLSDITAVHDPDYATEV 63
Query: 99 VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHA 156
+ GG T +W A + G + A+ LDG ++L RPPGHHA
Sbjct: 64 RSFCERGGGSWDPDTAATESTWPAIRASAGLAMDAIDAALDGADGRDTPFSLGRPPGHHA 123
Query: 157 QPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A G+CF+NNA +A Q AL++ G +V + D DVH+GNGT + FY V S+H
Sbjct: 124 ITDDAMGFCFVNNAAVAAQHALDAHGLDRVAIFDWDVHHGNGTQDIFYDRGDVFYTSIHE 183
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+ +P G+V + G+ +G G LN+P P G GD Y A+ + + PAI+ F+P++
Sbjct: 184 D-----GLYPGTGSVAQTGDCDGAGTTLNLPFPTGAGDADYAAAVDDFIAPAIRAFDPDL 238
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA-- 333
V+ G D+ DP R L+ +GY + VR ++ R + L V EGGY + A
Sbjct: 239 FVVSAGFDAHHHDPISRLHLSTEGYAMLTDRVRRISAR-TDAPLAFVLEGGYSLDTLADG 297
Query: 334 -YCLHATLEG 342
+H T +G
Sbjct: 298 VSTVHETFDG 307
>gi|257053316|ref|YP_003131149.1| histone deacetylase superfamily [Halorhabdus utahensis DSM 12940]
gi|256692079|gb|ACV12416.1| histone deacetylase superfamily [Halorhabdus utahensis DSM 12940]
Length = 336
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 146/305 (47%), Gaps = 28/305 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTG +HPE+ DR++ I L Y+ + IP
Sbjct: 10 LEHDTGS----------------RHPESPDRLRAIQRTLADSANVEYVP-ATAIPRD--A 50
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--K 143
+ + H DY+ ++ + GG TV +W AA+ + A L+G +
Sbjct: 51 IWAVHDHDYLEDVRQFCANGGGNWDADTVAVEATWDAAVASATLAAWAADEALEGADGCE 110
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGF 202
++L RPPGHHA A G+CFLNNA +A + AL G +V ++D DVH+GNGT + F
Sbjct: 111 TPFSLGRPPGHHAVEDDAMGFCFLNNAAIAAEHALRRDGVDRVAILDWDVHHGNGTQDIF 170
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTE 262
Y + V S H +P G V E G G G LN+P P+G+GD Y+ E
Sbjct: 171 YDRSDVYYASFHEE-----GLYPGTGDVGETGADAGRGRTLNVPFPSGSGDADYLAVHRE 225
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
+V P + FEP++I++ G D+ DP R ++ GY + V LADR G L V
Sbjct: 226 VVAPEFENFEPDLIIVSAGFDAHENDPISRMLVSTAGYGVLAERVHELADRIDAG-LAFV 284
Query: 323 QEGGY 327
EGGY
Sbjct: 285 LEGGY 289
>gi|53723676|ref|YP_103121.1| histone deacetylase family protein [Burkholderia mallei ATCC 23344]
gi|52427099|gb|AAU47692.1| histone deacetylase family protein [Burkholderia mallei ATCC 23344]
Length = 340
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 152/298 (51%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 9 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAAADDDLRRIHPAHYLDAFKRASDAGGGDL 68
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 69 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 128
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + + P +
Sbjct: 129 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDR-CFPPGY---S 184
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 185 GADERGAGAGAGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 244
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 245 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 302
>gi|425457411|ref|ZP_18837114.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389801238|emb|CCI19573.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 305
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 157/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVGALKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPIEIRDEVIPLIKQVHNQDYVDRLRRICQRGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPLP
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAKEKGE---FNNVLNIPLPA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYVILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|433646943|ref|YP_007291945.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mycobacterium smegmatis JS623]
gi|433296720|gb|AGB22540.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mycobacterium smegmatis JS623]
Length = 309
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 135/281 (48%), Gaps = 13/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR + + S+L R P + + + A + H+ Y++ L G +
Sbjct: 20 HPERPDRYRVVESVLGRPEFEPLMREEAEL-ADLDTTRYVHSNRYVDGLESVRPDAGYVY 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T++ P +W L VG T+ A+ V G + A+ RPPGHHA+ A G+C
Sbjct: 79 LDGGDTMMEPSTWEVVLRGVGATVQAVDKVCSGQVQNAFVACRPPGHHAETERAMGFCLF 138
Query: 168 NNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN + + A + G +V ++D DVH+GNGT E FY VL S H P P
Sbjct: 139 NNISIGARHAQRHHGLERVAIVDFDVHHGNGTQEIFYSDPSVLYASTHQM-----PLFPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G V E G G F N PL G G A + ++PA+ F P +I++ G D+
Sbjct: 194 TGAVRETGVGNIF----NSPLAAGDGGAELREAFEDRILPALDAFSPELIIVSAGFDAHE 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G +T D + + R + A++ GRL+ V EGGY
Sbjct: 250 RDPLGSLQMTADDFAWVTRAIMESAEKNCDGRLVAVLEGGY 290
>gi|53719031|ref|YP_108017.1| histone deacetylase [Burkholderia pseudomallei K96243]
gi|52209445|emb|CAH35396.1| histone deacetylase family protein [Burkholderia pseudomallei
K96243]
Length = 383
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 52 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAAADDDLRRIHPAHYLDAFKRASDAGGGDL 111
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 112 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 171
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 172 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCF----PPGYS 227
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 228 GADERGAGAGAGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 287
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 288 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 345
>gi|342306691|dbj|BAK54780.1| protein deacetylase [Sulfolobus tokodaii str. 7]
Length = 350
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 145/257 (56%), Gaps = 21/257 (8%)
Query: 85 QLLSF-HTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMK------H 136
+LLS HT +YI + + G ++ +G T G + AAL+ V T++A++ H
Sbjct: 55 ELLSLIHTKEYIEFIKRKSEEGSGLLDEGDTPAFKGIFEAALIRVSGTVTAVELLQSYDH 114
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
++ G HHA+ + A G+C N+ LA++LA S K+ ++DID H+G+
Sbjct: 115 TINIGGGF---------HHAKRSQASGFCVFNDVALAIKLAERS-FKKIALVDIDGHHGD 164
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT Y KVL +SLHM H + P G E+G GEG G +NIPLP GTGD Y
Sbjct: 165 GTQYLLYDDPKVLKVSLHMFHPRF---FPGTGDEYEIGSGEGKGMTINIPLPPGTGDDMY 221
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
++A E+VVP I++F+P++I L+ G DS DP L+ GY E+ R V SLA +++
Sbjct: 222 LYAFNEIVVPKIKEFKPDLIFLLNGGDSYYEDPLVELKLSTKGYLEVVRTVHSLAHQFAN 281
Query: 317 GRLLIVQEGGYHVTYSA 333
G+L++ GGY+ +A
Sbjct: 282 GKLVMTGGGGYNYEATA 298
>gi|409723694|ref|ZP_11270827.1| histone deacetylase superfamily protein [Halococcus hamelinensis
100A6]
gi|448721698|ref|ZP_21704241.1| histone deacetylase superfamily protein [Halococcus hamelinensis
100A6]
gi|445790770|gb|EMA41420.1| histone deacetylase superfamily protein [Halococcus hamelinensis
100A6]
Length = 336
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 143/282 (50%), Gaps = 13/282 (4%)
Query: 49 KHPENSDRIKNIVSILKRGPISPY-ISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
+HPE+ DR++ I +RG + + + P H DY+ E E +GG
Sbjct: 17 RHPESPDRLRAI----RRGLAHRHGVEYVDADPITAEAARRVHDDDYVTEFREFCDSGGG 72
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
TV +W AA + G + A + + G ++L RPPGHHA A G+C
Sbjct: 73 QWDPDTVAVEATWEAACKSAGLAVWAAEEAVAGATGRDTPFSLGRPPGHHAVADDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F NNA +A Q L+ G +V VID DVH+GNGT + FY V S+H HG + P
Sbjct: 133 FFNNAAVAAQATLDDGLDRVAVIDWDVHHGNGTQDIFYDRGDVCYCSIH-EHGLY----P 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
GTVDE G GEG G +NIP G+GD YV A+ P + F+P+++++ G D+
Sbjct: 188 GTGTVDETGAGEGTGTTVNIPFRAGSGDAAYVEALETAFAPVLAGFDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP R ++ +GY + RSLADR L V EGGY
Sbjct: 248 VNDPISRMSVSTEGYGVLAARARSLADRLDAA-LGFVLEGGY 288
>gi|167738105|ref|ZP_02410879.1| histone deacetylase family, putative [Burkholderia pseudomallei 14]
gi|167902246|ref|ZP_02489451.1| histone deacetylase family, putative [Burkholderia pseudomallei
NCTC 13177]
gi|418540556|ref|ZP_13106086.1| histone deacetylase family protein [Burkholderia pseudomallei
1258a]
gi|418546800|ref|ZP_13111991.1| histone deacetylase family protein [Burkholderia pseudomallei
1258b]
gi|385361166|gb|EIF67058.1| histone deacetylase family protein [Burkholderia pseudomallei
1258a]
gi|385362926|gb|EIF68716.1| histone deacetylase family protein [Burkholderia pseudomallei
1258b]
Length = 369
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAATDDDLRRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 214 GADERGAGAGAGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 274 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 331
>gi|254413403|ref|ZP_05027174.1| Histone deacetylase family, putative [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180023|gb|EDX75016.1| Histone deacetylase family, putative [Coleofasciculus
chthonoplastes PCC 7420]
Length = 308
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 156/333 (46%), Gaps = 35/333 (10%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
V + D LNHD G GF HPE +R+ IV+ L P + + W
Sbjct: 4 VIYSDEFLNHDNG----------GF------HPERPERLTAIVNALNAAPWADQVDWQLP 47
Query: 79 IPAQ----IPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
P + +P L H DYIN + + GG M+ T ++P S+ ALLA+ L +
Sbjct: 48 TPVESRPVMPLLQKVHDQDYINLVKQLAHEGGGMIDGDTRVSPRSYDIALLAISAWLDGV 107
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVH 193
VL + A+ L RPPGHHA+ G+C +NA +A AL +G KV ++D DVH
Sbjct: 108 DRVLTSNNP-AFVLARPPGHHAEGPRGMGFCLFSNAAIAAYYALEQAGIQKVAILDWDVH 166
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
+GNGT +++ SLH G HP+ E + LNIP+P+G+
Sbjct: 167 HGNGTQSLVENDARIVYCSLHQYPFYPGTGHPR--------ERGAYNNVLNIPIPSGSTF 218
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y + V+P + +F+P+++++ G D++A DP L + +
Sbjct: 219 TQYQPMFEQGVIPFLNEFQPDLLIVSAGYDANADDPLASVALKPKDFGVFTDYCLQVTH- 277
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
R+L EGGY +T A + AT+E LNL
Sbjct: 278 ----RILFGLEGGYDLTALAKSVIATIEPCLNL 306
>gi|154298249|ref|XP_001549548.1| hypothetical protein BC1G_11969 [Botryotinia fuckeliana B05.10]
Length = 780
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 187/358 (52%), Gaps = 43/358 (12%)
Query: 19 VFWDDGMLNHDTGKGLFDTGF--DPGFLEVLEKHPENSDRI-----KNIVSILKRGPISP 71
V +DD M H +G +T DP +E + + +++ + +N+ ILK P +
Sbjct: 89 VCYDDRMKLHTSGDYSDNTAHPEDPRRIEHIMRAFKDAGLVYTGNAENVEKILKESP-NK 147
Query: 72 YISWHSGIPAQIPQLLSFHTP---DYIN--------ELVEADK---AGGKMVCDGTVLNP 117
Y+ A+ ++ HT D++ EL EA++ G K + G P
Sbjct: 148 YMQRIMARLARKDEICLAHTAFHYDWVESLLSMTSEELREANQRYDTGRKSLYVG----P 203
Query: 118 GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA 177
++ AAL+A G + KHV+ G+ K A A++RPPGHHA+ A G+C NN +A ++
Sbjct: 204 CTYDAALVAAGGAIETCKHVVVGNVKNAIAIIRPPGHHAEENEALGFCVFNNVPIAAKVC 263
Query: 178 LNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ-----NG 228
+ C KV+++D D+H+GNGT FY VL ISLH+ ++G + P P +G
Sbjct: 264 MADYPEICRKVLILDWDIHHGNGTQNMFYDDPNVLYISLHVYDNGQFYPGQPDDPSLPDG 323
Query: 229 TVDELGEGEGFGYNLNIP-LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D++G G G G N+NI + G GD Y+ A +V+P Q+F+P+++++ G D++A
Sbjct: 324 GNDKVGRGAGLGKNVNIGWVSQGMGDGEYMAAFQRIVMPIAQEFDPDLVIISAGFDAAAG 383
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
D G +T Y M ++ SLAD G++ + EGGY+ ++ SA + TL G
Sbjct: 384 DELGGCFVTPACYSHMTHMLMSLAD----GKVAVCLEGGYNLAAISQSALAVAKTLMG 437
>gi|260425589|ref|ZP_05779569.1| acetylpolyamine aminohydrolase [Citreicella sp. SE45]
gi|260423529|gb|EEX16779.1| acetylpolyamine aminohydrolase [Citreicella sp. SE45]
Length = 343
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 124/220 (56%), Gaps = 14/220 (6%)
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
TV++ G+W AA+ + L+ VLDG +A+ L RPPGHHA GYCF NNA +
Sbjct: 119 TVMSRGTWEAAMSSKDVALTTTDLVLDGKENVAFGLCRPPGHHAATDQFGGYCFFNNAAI 178
Query: 173 AVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH--PQN-GT 229
+ Q AL+ GC KV ++D+D H+GNGT E FY + VL +SLH + P H P G
Sbjct: 179 SAQHALDKGCAKVAILDVDFHHGNGTQEIFYDRDDVLFLSLHGD-----PMHTFPHFLGH 233
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
E G+G G G+N N PLP G + ++ + + + IQ ++P+M+++ +G D+ DP
Sbjct: 234 AGETGKGAGEGFNWNYPLPPGASYQIWLAKLQD-ALARIQAYDPDMVIVSLGVDTFEHDP 292
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
LT D + + GR + +L G + V EGGY V
Sbjct: 293 ISFFRLTHDDFVDYGRRIAAL-----GKPTVYVMEGGYAV 327
>gi|15922638|ref|NP_378307.1| acetoin utilization protein AcuC [Sulfolobus tokodaii str. 7]
Length = 362
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 145/257 (56%), Gaps = 21/257 (8%)
Query: 85 QLLSF-HTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMK------H 136
+LLS HT +YI + + G ++ +G T G + AAL+ V T++A++ H
Sbjct: 67 ELLSLIHTKEYIEFIKRKSEEGSGLLDEGDTPAFKGIFEAALIRVSGTVTAVELLQSYDH 126
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
++ G HHA+ + A G+C N+ LA++LA S K+ ++DID H+G+
Sbjct: 127 TINIGGGF---------HHAKRSQASGFCVFNDVALAIKLAERS-FKKIALVDIDGHHGD 176
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT Y KVL +SLHM H + P G E+G GEG G +NIPLP GTGD Y
Sbjct: 177 GTQYLLYDDPKVLKVSLHMFHPRF---FPGTGDEYEIGSGEGKGMTINIPLPPGTGDDMY 233
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
++A E+VVP I++F+P++I L+ G DS DP L+ GY E+ R V SLA +++
Sbjct: 234 LYAFNEIVVPKIKEFKPDLIFLLNGGDSYYEDPLVELKLSTKGYLEVVRTVHSLAHQFAN 293
Query: 317 GRLLIVQEGGYHVTYSA 333
G+L++ GGY+ +A
Sbjct: 294 GKLVMTGGGGYNYEATA 310
>gi|347831677|emb|CCD47374.1| hypothetical protein [Botryotinia fuckeliana]
Length = 796
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 187/358 (52%), Gaps = 43/358 (12%)
Query: 19 VFWDDGMLNHDTGKGLFDTGF--DPGFLEVLEKHPENSDRI-----KNIVSILKRGPISP 71
V +DD M H +G +T DP +E + + +++ + +N+ ILK P +
Sbjct: 105 VCYDDRMKLHTSGDYSDNTAHPEDPRRIEHIMRAFKDAGLVYTGNAENVEKILKESP-NK 163
Query: 72 YISWHSGIPAQIPQLLSFHTP---DYIN--------ELVEADK---AGGKMVCDGTVLNP 117
Y+ A+ ++ HT D++ EL EA++ G K + G P
Sbjct: 164 YMQRIMARLARKDEICLAHTAFHYDWVESLLSMTSEELREANQRYDTGRKSLYVG----P 219
Query: 118 GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA 177
++ AAL+A G + KHV+ G+ K A A++RPPGHHA+ A G+C NN +A ++
Sbjct: 220 CTYDAALVAAGGAIETCKHVVVGNVKNAIAIIRPPGHHAEENEALGFCVFNNVPIAAKVC 279
Query: 178 LNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ-----NG 228
+ C KV+++D D+H+GNGT FY VL ISLH+ ++G + P P +G
Sbjct: 280 MADYPEICRKVLILDWDIHHGNGTQNMFYDDPNVLYISLHVYDNGQFYPGQPDDPSLPDG 339
Query: 229 TVDELGEGEGFGYNLNIP-LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
D++G G G G N+NI + G GD Y+ A +V+P Q+F+P+++++ G D++A
Sbjct: 340 GNDKVGRGAGLGKNVNIGWVSQGMGDGEYMAAFQRIVMPIAQEFDPDLVIISAGFDAAAG 399
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
D G +T Y M ++ SLAD G++ + EGGY+ ++ SA + TL G
Sbjct: 400 DELGGCFVTPACYSHMTHMLMSLAD----GKVAVCLEGGYNLAAISQSALAVAKTLMG 453
>gi|330928204|ref|XP_003302166.1| hypothetical protein PTT_13889 [Pyrenophora teres f. teres 0-1]
gi|311322639|gb|EFQ89752.1| hypothetical protein PTT_13889 [Pyrenophora teres f. teres 0-1]
Length = 884
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 179/341 (52%), Gaps = 30/341 (8%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYIS--------WHSGIP-AQIPQLLSFHTPDYINELV 99
HPE+ RI +I +K+ G ++ S W A P++L HT ++ + L
Sbjct: 143 HPEDPRRIHSIFEEIKQAGLVASSTSEEDQQDHCWRIATRFATKPEILLIHTEEHYDFLK 202
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
E +A G D N ++ A LA G + A K V++GH + A A++RPPGHHA+
Sbjct: 203 E--QAEG---LDSIYFNHSTYECAKLAAGGAIEACKAVVEGHVRNAIAIIRPPGHHAETD 257
Query: 160 MADGYCFLNNAGLAV---QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM- 215
G+C NN +A Q A C KV+++D DVH+GNG FY VL ISLH+
Sbjct: 258 SPSGFCIFNNVPIATRVCQKAYPETCRKVLILDWDVHHGNGIQHAFYDDPNVLYISLHVF 317
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPN 274
G++ P+ P +G ++ GEG G G N+NIP +G GD Y++A E+V+P +F+P+
Sbjct: 318 KDGNFYPNLP-DGNLNYCGEGLGEGKNVNIPWAEHGMGDAEYLYAFQEVVMPIATEFDPD 376
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV-TYSA 333
++++ G D++ D G +T Y M ++ LA G+L++ EGGY++ + +
Sbjct: 377 LVIISAGFDAAEGDLLGGCFVTPACYGHMTHMLMRLA----KGKLVVCLEGGYNLRSIAR 432
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
L T +L P L D P+D A V +E++K+
Sbjct: 433 SALAVTRVLMLEPPDRLHIDLPG--PKDSA--VHTVENVKR 469
>gi|170117317|ref|XP_001889846.1| histone deacetylase complex protein [Laccaria bicolor S238N-H82]
gi|164635186|gb|EDQ99497.1| histone deacetylase complex protein [Laccaria bicolor S238N-H82]
Length = 705
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 154/311 (49%), Gaps = 36/311 (11%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I + L+ ++ + W P + + L H+ D+ ++++ + +
Sbjct: 64 HPERPARIDRIWNTLQNDQLTQNMKWLPIRPVRKEEALLVHSDDHWDKVIAIQYMSDQQL 123
Query: 110 CDGT--------VLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
D + G+ AALL+ G + + V G K +A+VRPPGHHA+P
Sbjct: 124 ADSEEYYEQMSLYVMSGTTRAALLSCGGVIESCLAVARGELKKTFAIVRPPGHHAEPDEH 183
Query: 162 DGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+CF NN +A ++ + K++++D DVH+GNGT F N VL +S+H G+
Sbjct: 184 MGFCFFNNVAVAARVVQQLTKIKKIMILDWDVHHGNGTQRAFNEDNSVLYVSIHRYEQGT 243
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMI-- 276
+ P P G + GEG G G+++N+P P G GD Y+HA ++V+P +F P ++
Sbjct: 244 YYPCGPFGG-MQSCGEGPGLGFSVNVPWPEAGMGDADYLHAFQKVVMPIAMEFAPELVIS 302
Query: 277 ------------------VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
++ G D++A D G ++ GY M ++ LA GGR
Sbjct: 303 KCHFFCFNVAIAKPPTVYIVSAGFDAAAGDDLGECFVSPAGYAHMTHMLSGLA----GGR 358
Query: 319 LLIVQEGGYHV 329
L++ EGGY++
Sbjct: 359 LVVALEGGYNL 369
>gi|126440388|ref|YP_001059367.1| histone deacetylase [Burkholderia pseudomallei 668]
gi|126219881|gb|ABN83387.1| histone deacetylase family [Burkholderia pseudomallei 668]
Length = 369
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAAADDDLRRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 214 GADERGAGAGAGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 274 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 331
>gi|193206283|ref|NP_001122780.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
gi|351063059|emb|CCD71106.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
Length = 957
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 164/341 (48%), Gaps = 22/341 (6%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D N TG L GF+ E V HPE+SDRI I L + I +
Sbjct: 1 MLFEDRQKNRSTGPTLI--GFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCT 58
Query: 75 WHSG-IPAQIPQLLSFHTPDYINELVEADKAGGKMV---C---DGTVLNP--GSWGAALL 125
+ + L H + +L+E++K + + C D + S A
Sbjct: 59 VLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQCEKYDSVFMTEFQNSMKVAKD 118
Query: 126 AVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKV 185
V ++ +A+VRPPGHHA G+C NN A + A SG ++
Sbjct: 119 GVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFSGAERI 178
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D+DVH+G+GT FY +VL S+H + HG + P P++ D +G G+G GYN N
Sbjct: 179 LIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESD-FDHIGSGKGLGYNAN 237
Query: 245 IPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
+ L G D Y+ + +++P +F+P+ +++ G D+ DP G CLT DGY +
Sbjct: 238 LALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHI 297
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
++SLA GR+L+V EGGY+ SA + + +L
Sbjct: 298 LYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 334
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 25/370 (6%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPD 93
F+ G D F + HPE R + I+ L+ G + + + A ++ HT
Sbjct: 433 FNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKK 492
Query: 94 YINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVL--DGHGKI 144
+ L + + + + L + A AVG L ++ + D +
Sbjct: 493 MLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN 552
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFY 203
A +VRPPGHHA + + G+C NN +A + A K V+++D DVH+GNGT E FY
Sbjct: 553 ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFY 612
Query: 204 RSNKVLTISLHM-NHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAM 260
+ V+ +S+H + G++ P P++ + ++GEG G G ++N+P GD Y A
Sbjct: 613 EDSNVMYMSIHRHDKGNFYPIGEPKDYS--DVGEGAGEGMSVNVPFSGVQMGDNEYQMAF 670
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+++P +F P+++++ G D++ DP G +T + + M + SLA GGR++
Sbjct: 671 QRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLA----GGRII 726
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLP----LALLSDPIAYYPED-EAFPVKVIESIKQY 375
V EGGY++T + A E + N L + A P+ E+ +K I +
Sbjct: 727 TVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAV 786
Query: 376 QNDVIPFLKG 385
Q LKG
Sbjct: 787 QQKYWSILKG 796
>gi|67642026|ref|ZP_00440789.1| histone deacetylase family protein [Burkholderia mallei GB8 horse
4]
gi|121599981|ref|YP_993285.1| histone deacetylase family protein [Burkholderia mallei SAVP1]
gi|167830115|ref|ZP_02461586.1| histone deacetylase family protein [Burkholderia pseudomallei 9]
gi|226197236|ref|ZP_03792813.1| histone deacetylase family protein [Burkholderia pseudomallei
Pakistan 9]
gi|237812694|ref|YP_002897145.1| histone deacetylase family protein [Burkholderia pseudomallei
MSHR346]
gi|254178212|ref|ZP_04884867.1| histone deacetylase family protein [Burkholderia mallei ATCC 10399]
gi|254179419|ref|ZP_04886018.1| histone deacetylase family protein [Burkholderia pseudomallei 1655]
gi|254197235|ref|ZP_04903657.1| histone deacetylase family protein [Burkholderia pseudomallei S13]
gi|254200073|ref|ZP_04906439.1| histone deacetylase family protein [Burkholderia mallei FMH]
gi|254206409|ref|ZP_04912761.1| histone deacetylase family protein [Burkholderia mallei JHU]
gi|418382810|ref|ZP_12966737.1| histone deacetylase family protein [Burkholderia pseudomallei 354a]
gi|418553019|ref|ZP_13117860.1| histone deacetylase family protein [Burkholderia pseudomallei 354e]
gi|121228791|gb|ABM51309.1| histone deacetylase family protein [Burkholderia mallei SAVP1]
gi|147749669|gb|EDK56743.1| histone deacetylase family protein [Burkholderia mallei FMH]
gi|147753852|gb|EDK60917.1| histone deacetylase family protein [Burkholderia mallei JHU]
gi|160699251|gb|EDP89221.1| histone deacetylase family protein [Burkholderia mallei ATCC 10399]
gi|169653976|gb|EDS86669.1| histone deacetylase family protein [Burkholderia pseudomallei S13]
gi|184209959|gb|EDU07002.1| histone deacetylase family protein [Burkholderia pseudomallei 1655]
gi|225930615|gb|EEH26625.1| histone deacetylase family protein [Burkholderia pseudomallei
Pakistan 9]
gi|237502808|gb|ACQ95126.1| histone deacetylase family protein [Burkholderia pseudomallei
MSHR346]
gi|238523077|gb|EEP86518.1| histone deacetylase family protein [Burkholderia mallei GB8 horse
4]
gi|385372135|gb|EIF77260.1| histone deacetylase family protein [Burkholderia pseudomallei 354e]
gi|385376987|gb|EIF81614.1| histone deacetylase family protein [Burkholderia pseudomallei 354a]
Length = 369
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAAADDDLRRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 214 GADERGAGAGAGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 274 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 331
>gi|381152198|ref|ZP_09864067.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methylomicrobium album BG8]
gi|380884170|gb|EIC30047.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methylomicrobium album BG8]
Length = 365
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 139/294 (47%), Gaps = 5/294 (1%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDY 94
F TG D G +H E R+ V +R + A + ++ H+P Y
Sbjct: 10 FATGGDAGVHHPPREHDEIPYRLAAAVEGFQRSRAAAVARQLPARRATLEEIARAHSPAY 69
Query: 95 INELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
I L+ + G + D T PGS AL A G L+ +LD A L RPPGH
Sbjct: 70 IEMLLATRTSSGWLDPD-TYYTPGSLDVALAASGAGLAITDALLDDACDQAVGLWRPPGH 128
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA A G+C LNN +A AL G +V+V+D DVH+GNGT + F +VL IS+H
Sbjct: 129 HACTDQAMGFCILNNVAIAAHHALARGASRVLVVDWDVHHGNGTQQIFESDPRVLFISIH 188
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
P +P+ G +E G GEG G+ +NIPL G G Y A LV+P ++ P
Sbjct: 189 QGR----PQYPETGLPNETGAGEGRGFTVNIPLSVGAGRSAYREAFQRLVLPIADQYAPT 244
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH 328
+ + G D+ DP G CL + Y E+ R++ R+ EGGY+
Sbjct: 245 ITFVSAGYDAHERDPLGGMCLRSEDYGELTRLLIGALGGPHAARIGFFLEGGYN 298
>gi|148253967|ref|YP_001238552.1| deacetylase [Bradyrhizobium sp. BTAi1]
gi|146406140|gb|ABQ34646.1| putative deacetylase [Bradyrhizobium sp. BTAi1]
Length = 309
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 139/280 (49%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DR++ + L + + A I L H Y+ EL + G +
Sbjct: 20 HPERADRLRAVEEALTEERFA-LLDRDEAPEADIALALLCHNEHYVTELRQMAPTSGIIY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A + V+ G + A+ VRPPGHHA+ G+CF +
Sbjct: 79 LDGDTSMSPGTWEAVMRGVGGAVAATESVMSGRHRNAFVAVRPPGHHAEIAKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A + G + +ID DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NVAIAARYAQRTFGIERAAIIDFDVHHGNGTQDIFWADKSVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E GE + +N PL + G + A L++P + KF P ++++ G D+
Sbjct: 194 GARGERGEHDTI---VNAPLASDDGSLEFRSAFENLILPQLTKFSPELVIISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDFGWVTRKLMDLADKCAGGRVVSVLEGGY 290
>gi|195130223|ref|XP_002009552.1| GI15174 [Drosophila mojavensis]
gi|193908002|gb|EDW06869.1| GI15174 [Drosophila mojavensis]
Length = 1137
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 25/349 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL-------VEAD 102
HPE RI+ I + + + S A ++ HT ++N + VE
Sbjct: 534 HPEQPMRIRQIHQMHDDYQLLGRMHQLSARAATTDEVCLAHTRAHVNSVRRLLGRSVEEL 593
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+ G + L+P ++ A LA G+ L A+ VL G + VRPPGHHA+P
Sbjct: 594 QQMGAGY-NSVYLHPRTFECATLASGSVLQAVDSVLRGQSRSGICNVRPPGHHAEPDQPH 652
Query: 163 GYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
G+C NN +A Q A+ G +++++D DVH+GNGT F + KVL +S+H HG++
Sbjct: 653 GFCIFNNIAIAAQYAIREFGLERILIVDWDVHHGNGTQHIFESNPKVLYMSIHRYEHGAF 712
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P P G D +G+ G G+N+NIP G GD Y A +L++P +F P ++++
Sbjct: 713 FPKGPA-GNYDMVGKNAGRGFNVNIPWNKKGMGDLEYALAFQQLILPIAYEFNPQLVLVS 771
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G D++ DP G +T +GY + +LA GGR+++ EGGY+V +Y +
Sbjct: 772 AGFDAAIGDPLGGCKVTPEGYGLFTHWLSALA----GGRIIVCLEGGYNVNSISYAMTMC 827
Query: 340 LEGVLN--------LPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
+ +L +P A S +A+ E + +E QY ++
Sbjct: 828 TKTLLGDPVPTPQFIPAAQRSATVAFQSCVETLQL-CVEQQHQYWKSLV 875
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 131/248 (52%), Gaps = 15/248 (6%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D ++P ++ +LLA G+T+ + +L G + A++RPPGHHA + +GYC+ NN
Sbjct: 171 DAIYIHPSTFKLSLLASGSTIELIDQLLLGKAQNGMAIIRPPGHHAMKSEFNGYCYFNNV 230
Query: 171 GLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
LA Q AL + ++++ID DVH+G GT FY ++VL S+H HGS+ P+ Q
Sbjct: 231 ALAAQHALEAHQLQRILIIDYDVHHGQGTQRFFYNDSRVLYFSIHRYEHGSFWPN-LQES 289
Query: 229 TVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+G G G GYN N+PL G G+ Y+ +L++P +++P +I++ G D++
Sbjct: 290 DYHAIGSGPGTGYNFNVPLNTKGMGNGDYLAIFQQLLLPVAMEYQPELIIVSAGYDAALG 349
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
P G +T Y + + + R+ +V EGG YC+ + EG
Sbjct: 350 CPEGEMEVTPACYPHLL----NPLLHLANCRVAVVLEGG-------YCVESLSEGAALTL 398
Query: 348 LALLSDPI 355
ALL DP
Sbjct: 399 RALLGDPC 406
>gi|170079377|ref|YP_001736015.1| acetylpolyamine aminohydrolase [Synechococcus sp. PCC 7002]
gi|169887046|gb|ACB00760.1| acetylpolyamine aminohydrolase [Synechococcus sp. PCC 7002]
Length = 305
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 156/331 (47%), Gaps = 35/331 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+H TG+ HPE++ R+ I LK + I W
Sbjct: 1 MIHLIYSDQFLDHGTGRS----------------HPESARRLTAIAQALKAVSWANQIQW 44
Query: 76 HS----GIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
H +P + H Y+ EL + ++GG T ++P S+ ALLAV L
Sbjct: 45 HEPTAIAFRDPLPWVRQLHDDYYLKELQKLAESGGGYWDPDTPVSPQSFDVALLAVNACL 104
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDI 190
+ L + +ALVRPPGHHA + G+C L N +A AL +G KV ++D
Sbjct: 105 DGVDLALQTKEPV-FALVRPPGHHATRSTGMGFCLLGNVAIAAHYALGLAGIKKVAILDW 163
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT + +++ SLH + P++P G G + LNIPL G
Sbjct: 164 DVHHGNGTEYLVEENPQIIYCSLHQD-----PAYPGTGQAHHHGRHQNI---LNIPLKPG 215
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
R YV ++V+P +Q+F+P+++++ G D++A DP L Y+ + L
Sbjct: 216 ADRRIYVQKFQDVVLPYLQEFQPDLLIVSAGYDATAKDPLAGMNLQPQDYKVFSEFCQQL 275
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
+L EGGYH+ A + ATLE
Sbjct: 276 P-----CPILFALEGGYHLQTLAESVVATLE 301
>gi|406604970|emb|CCH43643.1| histone deacetylase 6/10 [Wickerhamomyces ciferrii]
Length = 760
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 182/366 (49%), Gaps = 33/366 (9%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYISWHSGI----------PAQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S I A+ ++L
Sbjct: 128 SYYEYIDPHPEDPRRIYRIYKILAEAGLIKDPTLSGIEDIGDLMLKLPVREAKAEEILQV 187
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ L + + + D N S+ A L+ G T+ A K V++G K
Sbjct: 188 HTEEHLKFLESTNSMTKEKLMEETEKGDSVYFNHDSYLGAKLSCGGTIEACKAVVEGKVK 247
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A+VRPPGHHA+P G+C +N +A + L + ++V++D DVH+GNGT +
Sbjct: 248 NALAVVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKNYPESVKRIVILDWDVHHGNGTQK 307
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY +VL ISLH G + P G ++ G G G N+NIP P G GD Y++
Sbjct: 308 AFYDDPRVLYISLHRYEQGKYYPG-TLAGAANQCGGGAAEGSNVNIPWPVGGMGDGDYIY 366
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++++P +F+P+++++ G D++ D G+ ++ Y M +++SLA G
Sbjct: 367 AFRKVIMPICYEFDPDLVIISSGFDAADGDMIGQCHVSPGAYGHMTHMLKSLA----KGN 422
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQND 378
L +V EGGY++ A A + ++ P L + P++EA V+ I+ + + Q+
Sbjct: 423 LCVVLEGGYNLDSIAVSALAVAKVLVGEPPDELKTKL---PKNEA--VETIDEVIEIQSK 477
Query: 379 VIPFLK 384
LK
Sbjct: 478 YFKSLK 483
>gi|432331274|ref|YP_007249417.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanoregula formicicum SMSP]
gi|432137983|gb|AGB02910.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanoregula formicicum SMSP]
Length = 347
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 148/300 (49%), Gaps = 39/300 (13%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL----------- 98
H E DR+ VSIL+R P +S + +PA +L H P Y+ L
Sbjct: 19 HKECHDRL---VSILERLPKG--LSIYPPVPATFEELQRVHVPGYLTWLERQCVKHVDFC 73
Query: 99 -----------VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYA 147
E ++ + T +NP S+ A AVG+ ++A+ DG + +A
Sbjct: 74 TLDEYIYTGGYFENNQIKQGYLDQNTYINPCSYEVATYAVGSAIAAVDRSFDG--ECCFA 131
Query: 148 LVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNK 207
LVRPPGHHA+ A G+C LNNA +A AL +V +ID D H+GNGT FY SN+
Sbjct: 132 LVRPPGHHAEADRAMGFCLLNNAAVAAAHALQQ-VDRVAIIDWDAHHGNGTQSIFYSSNR 190
Query: 208 VLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
VL S H + P GT+ E+G EG G+N+N PL + +G Y E+++PA
Sbjct: 191 VLYCSTHEMD-----NFPHTGTLQEIGSNEGLGFNVNAPLVHKSGIADYYAVFMEVILPA 245
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+++F P+++++ GQD+ + DP L + +VR D L V EGGY
Sbjct: 246 VERFRPDLVIVSAGQDTLSDDPQESMLLKPADIGTLAALVRDGRD----CPLAFVLEGGY 301
>gi|302307263|ref|NP_983880.2| ADL216Cp [Ashbya gossypii ATCC 10895]
gi|299788916|gb|AAS51704.2| ADL216Cp [Ashbya gossypii ATCC 10895]
gi|374107093|gb|AEY96001.1| FADL216Cp [Ashbya gossypii FDAG1]
Length = 702
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 182/361 (50%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG-----PISPYISWHSGIPAQIP-------QLLSF 89
+ E ++ HPE+ RI I IL P I + +IP ++L+
Sbjct: 69 SYFEYIDPHPEDPRRIYRIYKILAENGLIEDPTLSGIDEIGELMQKIPVREATEEEILTV 128
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ L + + + D N S +A L+ G + A K V++G K
Sbjct: 129 HSKEHVEFLKTTNTMDREQLLKETEAGDSVYYNNDSLISARLSCGGAIEACKAVVEGRVK 188
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A+VRPPGHHA+P +A G+C +N +A Q L + +V+++D D+H+GNGT +
Sbjct: 189 NAMAVVRPPGHHAEPGVAGGFCLFSNVAVAAQNILKNYPESVRRVMILDWDIHHGNGTQK 248
Query: 201 GFYRSNKVLTISLHMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY N+VL +SLH G + P G D+ G+G+G G+N NIP +G GD Y+
Sbjct: 249 AFYGDNRVLYVSLHRYELGKYYPG-TSYGNYDQCGDGKGEGFNCNIPWSCSGVGDAEYMW 307
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ ++ Y + +++SLA G
Sbjct: 308 AFEQVVIPMGREFQPDLVIISSGFDAADGDTIGQCHVSPACYGHLTHMLKSLAR----GN 363
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
+ +V EGGY++ A + ++ P L P+ P+ EA VI+ +Y
Sbjct: 364 MCVVLEGGYNLDSIAKSALGVAKVLIGEPPDELPQPLK-QPKPEAIVTIDMVIKEQSKYW 422
Query: 377 N 377
N
Sbjct: 423 N 423
>gi|367474103|ref|ZP_09473629.1| putative deacetylase [Bradyrhizobium sp. ORS 285]
gi|365273601|emb|CCD86097.1| putative deacetylase [Bradyrhizobium sp. ORS 285]
Length = 309
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 139/280 (49%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DR++ + L + + A I L H Y+ EL + G +
Sbjct: 20 HPERADRLRAVEEALTEERFA-LLDRDEAPEADIELALLCHNEHYVTELRQMAPTSGIIY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A + V+ G + A+ VRPPGHHA+ G+CF +
Sbjct: 79 LDGDTSMSPGTWEAVMRGVGGAVAATESVMSGKHRNAFVAVRPPGHHAEIAKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A + G + +ID DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NVAIAARYAQRTFGIERAAIIDFDVHHGNGTQDIFWADKSVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E GE + +N PL + G + A L++P + KF P ++++ G D+
Sbjct: 194 GARGERGEHDTI---VNAPLASEDGSLEFRSAFENLILPQLTKFSPELVIISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDFGWVTRKLMELADKTAGGRVVSVLEGGY 290
>gi|448091857|ref|XP_004197432.1| Piso0_004685 [Millerozyma farinosa CBS 7064]
gi|448096439|ref|XP_004198463.1| Piso0_004685 [Millerozyma farinosa CBS 7064]
gi|359378854|emb|CCE85113.1| Piso0_004685 [Millerozyma farinosa CBS 7064]
gi|359379885|emb|CCE84082.1| Piso0_004685 [Millerozyma farinosa CBS 7064]
Length = 801
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 170/328 (51%), Gaps = 33/328 (10%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPISPYISW---------HSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I L G + S IP A ++L
Sbjct: 105 SYSEYIDPHPEDPRRIYRIYKKLAEGGLVQDSSLAGKDEIGELMQKIPTREATAEEILEV 164
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ D++ + E + + + D +N S+ +A L+ G + A K V++G K
Sbjct: 165 HSEDHLKFISETESMSRERLLEETEKGDSIYVNNDSFFSAKLSCGGAIEACKAVIEGRVK 224
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
A A+VRPPGHHA+P G+C +N +A + L + ++V++D D+H+GNGT +
Sbjct: 225 NALAVVRPPGHHAEPDSPGGFCLFSNVAVAAKNILKNYPESVRRIVIVDWDIHHGNGTQK 284
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP--LPNGTGDRGYV 257
FY +VL ISLH +G + P + G + GEG+G GY++NIP +P G GD Y
Sbjct: 285 AFYNDPRVLYISLHRYENGKFYPG-TKYGAHTQTGEGKGEGYSVNIPWSIP-GMGDGDYF 342
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+A ++V+P I +F+P++I++ G D++ D G +T GY M ++ +A G
Sbjct: 343 YAFNKVVIPIITEFDPDLIIVSSGFDAADGDIIGECHVTPTGYGYMTHSLKGIA----KG 398
Query: 318 RLLIVQEGGYH---VTYSAYCLHATLEG 342
++ +V EGGY+ ++ SA + L G
Sbjct: 399 KMCVVLEGGYNLDSISKSALAVAKVLVG 426
>gi|448306999|ref|ZP_21496900.1| histone deacetylase [Natronorubrum bangense JCM 10635]
gi|445596546|gb|ELY50631.1| histone deacetylase [Natronorubrum bangense JCM 10635]
Length = 342
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 166/333 (49%), Gaps = 23/333 (6%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE DR++ I LKR Y++ P + + + H Y+ +
Sbjct: 13 DPG-----SRHPETPDRLRAIRERLKRKHGVEYVN---ADPCDLETMAAVHEQAYLESVK 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
+ GG T +W A +VG A+ L+G K +++ RPPGHHA
Sbjct: 65 QFCADGGGNWDPDTTAVEETWDAVRHSVGLACWAVDAALEGQNGRKTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NN +A Q AL++ +V ++D DVH+GNGT + FY + V +S+H
Sbjct: 125 YDDAMGFCFVNNVAVAAQHALDTDDHDVDRVAIVDWDVHHGNGTQDIFYERDDVFFVSIH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G +DE G G+G G LNIP+P GT D+ Y+ A+ +V A+ +F+P+
Sbjct: 185 EQ-----GLYPGTGAIDETGTGDGDGTTLNIPMPAGTDDQDYLSAVEGPIVSALTEFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
+++ G D+ DP R L+ + Y M +R+LAD + L + EGGY +
Sbjct: 240 CLLISAGFDAHRHDPISRIRLSTEAYALMTDRLRTLADD-TDAALAFILEGGYGLDVLAD 298
Query: 332 SAYCLHATLEGVLNL-PLALLSDPIAYYPEDEA 363
S +H T +G + P A SD A ED A
Sbjct: 299 SVAIVHETFDGRAPIEPDAGCSDKAASTLEDVA 331
>gi|383774024|ref|YP_005453090.1| acetylpolyamine aminohydrolase [Bradyrhizobium sp. S23321]
gi|381362148|dbj|BAL78978.1| probable acetylpolyamine aminohydrolase [Bradyrhizobium sp. S23321]
Length = 341
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 154/318 (48%), Gaps = 49/318 (15%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA 101
G ++ + PE +DR+ + K + P I + G A+I H+P+Y++ L EA
Sbjct: 21 GVVKRTTEQPERADRLLKGLKDGKHQLVEPTI-FGQGPRARI------HSPEYLSFLSEA 73
Query: 102 --------------------------------DKAGGKMVCDGTVLNPGSWGAALLAVGT 129
K G + PG+W A A
Sbjct: 74 WDAWTALGDSGPEMIGNIHPVRHAATYPTHIVGKLGWHTADTAAPIGPGTWAAVCAATDV 133
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
+A + V+DG + YAL RPPGHHA MA G+CFLNN+ +A L +VV++D
Sbjct: 134 ATTAAQMVMDGEDAV-YALCRPPGHHAYRDMAGGFCFLNNSAIAAA-HLRLKHERVVILD 191
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
+DVH+GNGT FY V T+S+H + ++ P G E GEG G G NLNIPL
Sbjct: 192 VDVHHGNGTQGIFYARPDVYTVSIHADPVAYYPY--VWGYAHERGEGPGLGTNLNIPLAI 249
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
GTGD GY+ AM ++ AI+ F P +V+ +G D+S DP LT G+R +G+ +
Sbjct: 250 GTGDDGYIQAM-DVARKAIESFAPGALVIALGLDASEHDPLKGLALTTPGFRRIGQAIAK 308
Query: 310 LADRYSGGRLLIVQEGGY 327
L G + VQEGGY
Sbjct: 309 L-----GLPTVFVQEGGY 321
>gi|73538432|ref|YP_298799.1| histone deacetylase superfamily protein [Ralstonia eutropha JMP134]
gi|72121769|gb|AAZ63955.1| Histone deacetylase superfamily [Ralstonia eutropha JMP134]
Length = 314
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ +R+K +V L R P + W + QL H DYI+E+ + G +
Sbjct: 21 HPESPERLKAVVEAL-RTPEFASLEWRDAPMGTVEQLQLIHDTDYIDEIAQRAPTHGYVP 79
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D TV++PGSW A + VG + + V++G + + RP GHHA+P A G+C
Sbjct: 80 LDAGDTVMSPGSWEAVMRCVGAACAGVDTVMNGDARNVFCATRPCGHHAEPAKAMGFCIF 139
Query: 168 NNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N A +A A +V V+D DVH+GNGT F+ ++ S H + P +P
Sbjct: 140 NQAAIAAAYACEVHKLERVAVVDFDVHHGNGTQAAFFNRPELFYASSHQS-----PFYPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G +N+PLP G + A++ LV+P+++ F P+++++ G D+
Sbjct: 195 TGARSETGVNHNI---VNVPLPRGCESAQFRAAISALVLPSLRAFAPDLLIISAGFDAHR 251
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + R + +AD GR++ + EGGY
Sbjct: 252 LDPLAGMNLEDSDFHWITRELMQIADEACNGRIVSILEGGY 292
>gi|108803327|ref|YP_643264.1| histone deacetylase superfamily protein [Rubrobacter xylanophilus
DSM 9941]
gi|108764570|gb|ABG03452.1| histone deacetylase superfamily [Rubrobacter xylanophilus DSM 9941]
Length = 342
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 142/262 (54%), Gaps = 6/262 (2%)
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
PA LL+ H Y+ L E +GG ++ T L PGSW AALLA G A + L
Sbjct: 49 PAPEAALLAVHERGYLKLLRELSSSGGGVLDPDTALGPGSWEAALLAAGAAAGAAEAALS 108
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTA 199
G ++ALVRPPGHHA A G+C +NNA +A A G +V V+D DVH+GNGT
Sbjct: 109 G--AASFALVRPPGHHAGRGRAMGFCLINNAAVAAAHARALGARRVAVLDWDVHHGNGTQ 166
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHA 259
E FY + VL +S+H G +P G +E+G G G G+ +N+PLP G+G+ GY A
Sbjct: 167 EIFYAAGDVLYLSVHRG----GLFYPGTGHPEEVGAGPGKGFTVNVPLPAGSGEGGYAAA 222
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +++F P ++V+ G D+ A DP G L + V SLA R SG
Sbjct: 223 FGGVLLPVLEEFAPELVVVSAGYDAHASDPLGGMRLEAGSFGRFAAAVASLARRASGTPP 282
Query: 320 LIVQEGGYHVTYSAYCLHATLE 341
V EGGY C+ AT+
Sbjct: 283 AFVLEGGYEAGALTACVAATIR 304
>gi|146339203|ref|YP_001204251.1| deacetylase [Bradyrhizobium sp. ORS 278]
gi|146192009|emb|CAL76014.1| putative deacetylase [Bradyrhizobium sp. ORS 278]
Length = 309
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 139/280 (49%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DR++ + L + + A I L H Y+ EL + G +
Sbjct: 20 HPERADRLRAVEEALTEERFA-LLDRDEAPEADIELPLLCHNEHYVTELRQMAPTSGIIY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A + V+ G + A+ VRPPGHHA+ G+CF +
Sbjct: 79 LDGDTSMSPGTWEAVMRGVGGAVAATESVMSGKHRNAFVAVRPPGHHAEIAKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A + G + +ID DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NVAIAARYAQRTFGIERAAIIDFDVHHGNGTQDIFWADKSVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E GE + +N PL + G + A L++P + KF P ++++ G D+
Sbjct: 194 GARSERGEHDTI---VNAPLASEDGSLEFRSAFENLILPQLTKFSPELVIISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDFGWVTRKLMELADKTAGGRVVSVLEGGY 290
>gi|186470598|ref|YP_001861916.1| histone deacetylase superfamily protein [Burkholderia phymatum
STM815]
gi|184196907|gb|ACC74870.1| histone deacetylase superfamily [Burkholderia phymatum STM815]
Length = 315
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 141/281 (50%), Gaps = 12/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ R+ ++ L R P ++W + Q+ H D+I+E+ E+ + G M
Sbjct: 21 HPESPKRLDTVLKTL-RSPEFAALAWRDAPMGTVEQVQLIHRQDFIDEVAESAPSHGYMP 79
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG TV++PGSW A + VG + + VL G + + RP GHHA+P+ A G+C
Sbjct: 80 LDGGDTVMSPGSWEAVMRCVGAACAGVDAVLAGEARNVFCATRPCGHHAEPSKAMGFCIF 139
Query: 168 NNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N A +A A +V V+D DVH+GNGT FY ++ S H + P +P
Sbjct: 140 NQAAIAAAYAYEVHKLERVAVVDFDVHHGNGTQAAFYNRPELFYASSHQS-----PLYPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G LN+PLP G + + + ++PA+++F P ++++ G D+
Sbjct: 195 TGKAAETGVSHNV---LNVPLPPGCDSQLFRSRIELDMLPALREFNPELVIISAGFDAHR 251
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L D + + R + +AD GGR++ + EGGY
Sbjct: 252 LDPLAALRLDDDDFYWITRELVKIADDTCGGRIVSILEGGY 292
>gi|168039175|ref|XP_001772074.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162676675|gb|EDQ63155.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 534
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 14/313 (4%)
Query: 38 GFDPGFL---EVLEKHPENSDRIKNIVSILK-RGPISPYISWHSGIPAQIPQLLSFHTPD 93
GFD L E + HPE +R++ I+ L+ G +S A +L HT +
Sbjct: 126 GFDERMLLHEETGKSHPERPNRLRAIMEGLQASGLLSERCFTIPSREATEAELEVVHTAN 185
Query: 94 YINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
+I+ + ++ G T N S AA LA G ++ G +A+VRPPG
Sbjct: 186 HISAVQATERRGLSYFTSDTYANEHSALAARLAAGICADLASAIMTGTACNGFAVVRPPG 245
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ G+C NN +A + A SG KV+V+D DVH+GNGT + F + +L ISL
Sbjct: 246 HHAEQDQVMGFCLHNNVCVAARAAQASGAKKVLVVDWDVHHGNGTQKIFEQDPTILYISL 305
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFE 272
H + G +P G +G G G G+++NIP G GD Y+ A +V+P ++FE
Sbjct: 306 HRHEA--GAFYPGTGWAHHVGSGPGEGFSVNIPWSCGGIGDEDYLSAFQHIVMPIARQFE 363
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---V 329
P++ ++ G D+++ DP G +T +GY +M ++ LA GR+L+V EGGY+ +
Sbjct: 364 PDITIVSAGFDAASGDPLGGCDVTPEGYAQMTSLLSFLA----AGRILVVLEGGYNLRSI 419
Query: 330 TYSAYCLHATLEG 342
+ SA + L G
Sbjct: 420 SASAAAVMKVLRG 432
>gi|86607562|ref|YP_476324.1| histone deacetylase family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556104|gb|ABD01061.1| histone deacetylase family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 303
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 30/315 (9%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
++ V++ D L+HDTG HPE R+++IV L+ P + + W
Sbjct: 1 MLPVYYSDIFLSHDTGP----------------FHPERPARLQSIVKALRGAPFANQLEW 44
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
A++ +L H+ +I ++ E AGG + T L+ S+ AA LAVG ++
Sbjct: 45 RDPPLAELAELERVHSRQHIQQVAELATAGGGHIDADTALSERSFEAARLAVGAWVAGSA 104
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHY 194
VL + A L RPPGHHA+P A G+C +NA +A AL+ G +V + D DVH+
Sbjct: 105 SVLTT-AQPALVLCRPPGHHAEPERAMGFCLFSNAAIAALWALDQPGVKRVAIFDWDVHH 163
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGT R ++ S+H P +P G+ E G G N+PLP G+
Sbjct: 164 GNGTQAVVERYPQLAYASIHQF-----PLYPGTGSARETGI---HGNLCNVPLPAGSDWL 215
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y A+ E ++P +Q F+P+++++ G D + DP L + + M R+ R
Sbjct: 216 AYKKALDEKILPFLQAFQPDLLLVSAGFDCAKGDPLAGMQLEPEAFGRMARLCLEQVTR- 274
Query: 315 SGGRLLIVQEGGYHV 329
+ L EGGY++
Sbjct: 275 ---KTLFGLEGGYNL 286
>gi|85001508|ref|XP_955470.1| histone deacetylase family protein [Theileria annulata strain
Ankara]
gi|65303616|emb|CAI75994.1| histone deacetylase family protein, putative [Theileria annulata]
Length = 878
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYR 204
+ALVRPPGHHA P G+C NN +A + L G +V ++D DVH+GNGT + FY
Sbjct: 209 FALVRPPGHHATPDKMMGFCIYNNVAIAARYLQHKFGLKRVAIVDWDVHHGNGTQDIFYD 268
Query: 205 SNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
N V ISLH + +P G DE+G G+G+GYN+NIPL + VH+ ++V
Sbjct: 269 DNSVCFISLHRYGDNEDSFYPYTGYCDEIGVGKGYGYNVNIPLEKSFTNADLVHSFNKVV 328
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
+P ++ FEP I++ G DS D G L DG+ + LA++YS GRLL+ E
Sbjct: 329 IPVLELFEPEFIIVSAGFDSGIDDLLGGCNLDWDGFSWATFKLCQLAEKYSNGRLLLSLE 388
Query: 325 GGYHVT 330
GGY ++
Sbjct: 389 GGYTLS 394
>gi|344304180|gb|EGW34429.1| histone deacetylase HDA1 [Spathaspora passalidarum NRRL Y-27907]
Length = 891
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 171/332 (51%), Gaps = 41/332 (12%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKR---------------GPISPYISWHSGIPAQIPQL 86
+ E ++ HPE+ RI I L GP+ I +I ++
Sbjct: 218 SYFEYIDPHPEDPRRIYRIYKKLAEAGLIQDSSLSGVNDIGPLMLKIPIREATAEEILEV 277
Query: 87 LSFHTPDYI--------NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
S +I ++L+E + G D +N S+ +A L+ G T+ A K V+
Sbjct: 278 HSESHLKFIESTETMTRDQLMEETEKG-----DSIYVNNDSYFSARLSCGGTIEACKAVI 332
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYG 195
+G K + A+VRPPGHHA+P G+C +N +A + L + K+V+ID D+H+G
Sbjct: 333 EGRVKNSLAVVRPPGHHAEPDSPGGFCLFSNVAVAAKNLLKTYPESVRKIVIIDWDIHHG 392
Query: 196 NGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP-LPNGTGD 253
NGT + FY +VL IS+H +G + P + G D++GE EG G+N+NIP +G D
Sbjct: 393 NGTQKSFYNDPRVLYISMHRYENGRFYPG-TKYGNSDQVGEEEGEGFNINIPWRSSGMHD 451
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
YV+A ++++P I +F+P++I++ G D++ D G +T GY M +++ +A
Sbjct: 452 GDYVYAFNKVILPTIIEFDPDLIIVSSGFDAADGDIIGGCHVTPAGYGYMTHMLKGIA-- 509
Query: 314 YSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
G+L ++ EGGY+ ++ SA + L G
Sbjct: 510 --KGKLAVILEGGYNLDSISKSALAVAKVLVG 539
>gi|19111896|ref|NP_595104.1| histone deacetylase (class II) Clr3 [Schizosaccharomyces pombe
972h-]
gi|3023933|sp|P56523.1|CLR3_SCHPO RecName: Full=Histone deacetylase clr3; AltName: Full=Cryptic loci
regulator 3
gi|4159999|gb|AAD05212.1| putative histone deacetylase [Schizosaccharomyces pombe]
gi|9716243|emb|CAC01518.1| histone deacetylase (class II) Clr3 [Schizosaccharomyces pombe]
Length = 687
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 30/346 (8%)
Query: 27 NHDTGKGLFDTG--FDPGF-----LEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
+H+ + L +G +DP L ++ HPE+ R+ + +K+ + S +
Sbjct: 47 SHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDV 106
Query: 80 PAQIP-------QLLSFHTPDYINELVEADK------AGGKMVCDGTVLNPGSWGAALLA 126
+IP +LL H+ + + + +K A + + D N S A LA
Sbjct: 107 FLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKISDSLYYNNESAFCARLA 166
Query: 127 VGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCG 183
G+ + V+ G K A+A+VRPPGHHA+P G+C NN + + L
Sbjct: 167 CGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIK 226
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYN 242
+V+++D D+H+GNGT FY VL +SLH +G + P G + GEG G G
Sbjct: 227 RVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPG-TNYGCAENCGEGPGLGRT 285
Query: 243 LNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYR 301
+NIP G GD Y++A +V+P +F+P+++++ G D++A D G+ LT Y
Sbjct: 286 VNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYA 345
Query: 302 EMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
M +++ LAD G++ I EGGY++ + A + +L +P
Sbjct: 346 HMTQMLMGLAD----GKVFISLEGGYNLDSISTSALAVAQSLLGIP 387
>gi|154249474|ref|YP_001410299.1| histone deacetylase superfamily protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153410|gb|ABS60642.1| histone deacetylase superfamily [Fervidobacterium nodosum Rt17-B1]
Length = 325
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 155/305 (50%), Gaps = 21/305 (6%)
Query: 49 KHPENSDRIKNIVSILKRG--PISP--------YISWHSGIPAQIPQLLSFHTPDYINEL 98
++PE R+K + LK+ + P Y++ I + S T +YI E+
Sbjct: 31 RNPERPSRLKLVYEFLKKNYPEVQPLGFSESVLYLAHEEDYIEYIKRKSSEVTQEYIPEV 90
Query: 99 VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
DK + GT +N ++ AA AV T LSA+++ L + I YAL RPPGHHA
Sbjct: 91 FFVDK----IFDTGTPINKETYKAAFGAVETVLSALEYSL-SNKVIVYALTRPPGHHAMK 145
Query: 159 TMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
GYC+ NN +A + G +V ++D+D H+GNGT + FY VL +S+H +
Sbjct: 146 KYGGGYCYFNNVAIAAKYLEEKGM-RVAILDLDFHHGNGTQDIFYDDPNVLYVSIHGDPR 204
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P + +G +E+G G G NLNIPLP GT Y A+ +L I ++P+ +L
Sbjct: 205 QFYPWY--SGYENEIGIGNAEGTNLNIPLPGGTTFEVYKKAL-DLAYNKILDYKPDFFIL 261
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
+G D+ DP G L Y+E+G + L ++ G +IV EGGY+ + +
Sbjct: 262 SLGTDTHINDPVGHFSLVDKDYKEIGLRISKLIEKIGNG--IIVHEGGYNRLSNLSAVKN 319
Query: 339 TLEGV 343
LEG+
Sbjct: 320 FLEGL 324
>gi|92116390|ref|YP_576119.1| histone deacetylase superfamily protein [Nitrobacter hamburgensis
X14]
gi|91799284|gb|ABE61659.1| histone deacetylase superfamily [Nitrobacter hamburgensis X14]
Length = 309
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 142/282 (50%), Gaps = 11/282 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DRI+ I +L ++ + + H YI EL A G +
Sbjct: 20 HPERPDRIRAIDEVLAEDRFKS-LARGEAPEGSLDSVALCHNEHYIGELRHRSPAEGLVY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T ++PG+W A + VG ++A + V+ G+ A+ RPPGHHA+ A G+CF +
Sbjct: 79 LDSDTSMSPGTWEAVMRGVGGAIAATEAVIAGNASNAFVATRPPGHHAETGRAMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
A +A + A G G+V V+D DVH+GNGT + F+ V+ S H P P +
Sbjct: 139 QAAIAARHAQRKHGIGRVAVVDFDVHHGNGTQDIFWADRTVMYCSTHQM-----PLFPGS 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL +G G + A L++P ++ F P ++V+ G D+ +
Sbjct: 194 GASGERGDHDTI---VNAPLASGDGGAKFRSAFENLILPRLETFAPELLVISAGFDAHSR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP L D + + R + +AD +GGR++ V EGGY++
Sbjct: 251 DPLASLNLDADDFGWVTRKLMDIADATAGGRIVSVLEGGYNL 292
>gi|189195388|ref|XP_001934032.1| histone deacetylase 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979911|gb|EDU46537.1| histone deacetylase 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 698
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 30/341 (8%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYIS--------WHSGIP-AQIPQLLSFHTPDYINELV 99
HPE+ RI +I +K G ++ S W A P++L HT ++ + L
Sbjct: 143 HPEDPRRIHSIFKEIKEAGLVASSTSEEDQQDHCWRIATRYATKPEILLIHTEEHYDFLK 202
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
E +A G D N ++ A LA G + A K V+ GH + A A++RPPGHHA+
Sbjct: 203 E--QAEG---LDSIYFNHSTFECAKLAAGGAIEACKAVVQGHVRNAIAIIRPPGHHAETD 257
Query: 160 MADGYCFLNNAGLAV---QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM- 215
G+C NN +A Q A C KV+++D DVH+GNG FY VL ISLH+
Sbjct: 258 SPSGFCIFNNVPIATRVCQKAYPETCRKVLILDWDVHHGNGIQHAFYNDPNVLYISLHVF 317
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPN 274
G++ P+ P +G ++ GEG G G N+NIP + G GD Y++A E+V+P +F+P+
Sbjct: 318 KGGNFYPNLP-DGDLNYCGEGPGEGKNVNIPWADHGMGDAEYLYAFQEVVMPIATEFDPD 376
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV-TYSA 333
++++ G D++ D G +T Y M ++ LA G+L++ EGGY++ + +
Sbjct: 377 LVIISAGFDAAEGDLLGGCFVTPACYGHMTHMLMRLA----KGKLVVCLEGGYNLRSIAR 432
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
L T +L P L D P+D A V +E++K+
Sbjct: 433 SALAVTRVLMLEPPDRLHIDLPG--PKDSA--VHTVENVKR 469
>gi|302768945|ref|XP_002967892.1| hypothetical protein SELMODRAFT_169296 [Selaginella moellendorffii]
gi|300164630|gb|EFJ31239.1| hypothetical protein SELMODRAFT_169296 [Selaginella moellendorffii]
Length = 545
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 169/317 (53%), Gaps = 32/317 (10%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG-- 78
+DD ML H F +P HPE DR+++I++ + P G
Sbjct: 147 YDDRMLLHAE----FQMKSNP--------HPERPDRLRSILAGFTAAGLYP-----GGCI 189
Query: 79 -IPAQ---IPQLLSFHTPDYINELVEADKA-GGKMVCDGTVLNPGSWGAALLAVGTTLSA 133
IPA+ +L + HT +++ E+VEA + T N S AA LA G
Sbjct: 190 LIPAREITRVELETVHTHEHV-EVVEATSSLESSYFTSDTYANGHSALAARLAAGVCADL 248
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVH 193
+L G +ALVRPPGHHA+ G+C NNA +A + + +G KV+++D DVH
Sbjct: 249 ASAILSGQVDNGFALVRPPGHHAEGATVMGFCLHNNACIAAKASQAAGAKKVLIVDWDVH 308
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTG 252
+GNGT E F VL ISLH + G G +P +G E+G G G G+++NIP P +G G
Sbjct: 309 HGNGTQEIFEHDPSVLYISLHRHEG--GLFYPGSGAAHEVGSGPGEGFSINIPWPCSGIG 366
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y+ A +V+P ++F P++ ++ G D++ DP G +T G+ +M +++ ++
Sbjct: 367 DNDYIVAFQHIVLPIAKQFAPDITIVSAGFDAARGDPLGGCQVTPAGFAQMTQLLSTV-- 424
Query: 313 RYSGGRLLIVQEGGYHV 329
SGG+LL+V EGGY++
Sbjct: 425 --SGGKLLVVLEGGYNL 439
>gi|14190349|gb|AAK55655.1| histone deacetylase HDA1 [Candida albicans]
Length = 653
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 184/363 (50%), Gaps = 41/363 (11%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E ++ HPE+ RI I L I P++ A ++L
Sbjct: 136 SYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGPFMLKIPIREATSEEILQV 195
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ D++ + + + D +N S+ +A L+ G T+ A K V++G K
Sbjct: 196 HSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVK 255
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P G+C +N +A + L + ++V++D D+H+GNGT +
Sbjct: 256 NSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDIHHGNGTQK 315
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP-LPNGTGDRGYVH 258
FY +VL ISLH +G + P + G ++++GEG G G+ +NIP +G D YV+
Sbjct: 316 AFYNDPRVLYISLHRFENGKFYPGT-KYGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVY 374
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A +++ P I +F+P++I++ G D++ D G +T GY M ++ +A G+
Sbjct: 375 AFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGGCHVTPAGYGYMTHTLKGIA----RGK 430
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP----IAYYPEDEAFPVKVIESIKQ 374
L ++ EGGY+ L +T + L + L+ +P I P+ EA ++V++ + +
Sbjct: 431 LAVILEGGYN-------LDSTSKSALAVAKVLVGEPPENTITLRPQAEA--IEVVDEVIK 481
Query: 375 YQN 377
Q+
Sbjct: 482 IQS 484
>gi|270015074|gb|EFA11522.1| hypothetical protein TcasGA2_TC014236 [Tribolium castaneum]
Length = 839
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 178/356 (50%), Gaps = 35/356 (9%)
Query: 12 AAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
A++ +N +DD ML H G + PE +R+ +I+ +L+ +
Sbjct: 480 ASDLPVNYIYDDQMLQHTPQSGDLE-------------RPERPERLTSIMKVLQEFGLLG 526
Query: 72 YISWHSGIPAQIPQLLSFHTPDY---INELVEADKAGGKMVCDGTVLNPGSWGAALLAVG 128
+ +P + S H Y +NE +E K +N + + +LAV
Sbjct: 527 RMQRTPIVPRDFTEY-SPHARGYLGTVNEAMEQSK--------DVYVNEHTHDSVVLAVS 577
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVV 187
LS + V+ G + A++RPPGHHA+ A GYCF+NN +A L+ +V++
Sbjct: 578 GLLSLVDGVMSGTSQAGVAVIRPPGHHAEHDKAMGYCFVNNIAVAANYLLDKYEVERVLI 637
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSH-PQNGTVDELGEGEGFGYNLNI 245
+D D+H+GNGT FY +++V+ +S+H + HG + P++ P+N T D G G G G+N+NI
Sbjct: 638 VDFDIHHGNGTQNMFYENDRVMYVSIHKDEHGKFFPANSPRNYTFD--GYGRGRGFNVNI 695
Query: 246 PLPNGT-GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMG 304
P N GD Y+ +++P F P ++++ G D+ DP G ++ + +
Sbjct: 696 PFNNDKMGDSEYLAVFHNVILPVAYSFGPQVVLVSGGFDAGIHDPLGGYVVSPETFGHFI 755
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPE 360
+++ LA GRL++ EGGY++T ++Y + +L P+ + + I + E
Sbjct: 756 HMLKGLAK----GRLILALEGGYNLTTTSYAFAICAKALLGDPIIMPKNKIKGFKE 807
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 165/339 (48%), Gaps = 37/339 (10%)
Query: 48 EKHPENSDRIKNIVSILK-RGPISPYISWHSGIPAQI-PQLLSFHTPDYINELVEADKAG 105
E +PEN R+++I+ +G ++ + + + ++++ H PD +L K
Sbjct: 65 ENYPENPQRLESILEKCTGQGLFERCVTLPNYKRSDLYEKVIAKHNPDLFAKLERVSKMD 124
Query: 106 GKM------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
K D N ++ AA ++ + L+ + V + ALVRPPGHHA
Sbjct: 125 LKAREQEASSYDAIYFNQSTFDAACRSLSSVLNLVTAVAKRDVQNGMALVRPPGHHAMEN 184
Query: 160 MADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NH 217
+GYC+ NN +A + L G K V+++D DVH+G GT FY N VL S+H H
Sbjct: 185 EYNGYCYFNNVAIAAESVLREGHSKRVMIVDFDVHHGQGTQRMFYERNDVLYFSIHRYEH 244
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMI 276
G++ P+ ++ + +G G+G G+N+N+PL GD Y+ + L++P +F P++I
Sbjct: 245 GTFWPNLLES-NFNYIGRGDGLGFNVNVPLNETMLGDDDYLAIVFNLLLPLGFEFNPDLI 303
Query: 277 VLVVGQDSS----AFDPN----------------GRQCLTMDGYREMGRIVRSLADRYSG 316
V+ G D++ F+P+ GR +T Y + ++ +LA
Sbjct: 304 VISAGYDAAIGCPEFNPDLVIVSAGFDSCMGDEKGRMNVTPGFYSHLISLLSTLAR---- 359
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
G++ +V EGGY + + TL +L P LL +PI
Sbjct: 360 GQIAVVLEGGYFLPSLSEGACMTLNSLLGSPCPLL-EPI 397
>gi|456356896|dbj|BAM91341.1| putative deacetylase [Agromonas oligotrophica S58]
Length = 309
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DR++ + L + A I L H Y+ EL + G +
Sbjct: 20 HPERADRLRAVEEALTEERFV-LLDRDEAPEADIELALLCHNEHYVTELRQMAPTSGIIY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A + V+ G K A+ VRPPGHHA+ G+CF +
Sbjct: 79 LDGDTSMSPGTWEAVMRGVGGAVAATESVMSGRHKNAFVAVRPPGHHAEIAKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A + G + ++D DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NVAIAARYAQRTFGIERAAIVDFDVHHGNGTQDIFWADKSVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E GE + +N PL + G + A L++P + KF P ++++ G D+
Sbjct: 194 GARGERGEHDTI---VNAPLASEDGSLEFRSAFENLILPQLTKFSPELVIISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDFGWVTRKLMDLADKTAGGRVVSVLEGGY 290
>gi|18418220|ref|NP_567921.1| histone deacetylase 14 [Arabidopsis thaliana]
gi|75249520|sp|Q941D6.1|HDA14_ARATH RecName: Full=Histone deacetylase 14
gi|15529220|gb|AAK97704.1| AT4g33470/F17M5_230 [Arabidopsis thaliana]
gi|21360523|gb|AAM47377.1| AT4g33470/F17M5_230 [Arabidopsis thaliana]
gi|332660831|gb|AEE86231.1| histone deacetylase 14 [Arabidopsis thaliana]
Length = 423
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 23/300 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGI------PAQIPQLLSFHTPDYINELVEA 101
E HPE S R+ IV+ L+ ++P + A + + + H Y+ L +A
Sbjct: 78 ESHPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKA 137
Query: 102 -DKAG--GKMVCDG---TVLNPGSWGAALLAVGTTLSAMKHVLDGHGK-----IAYALVR 150
D+A G + +G T ++ +L+A G ++ + V+ I +AL+R
Sbjct: 138 MDEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIR 197
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A + G ++ +ID DVH+GNGT + F +
Sbjct: 198 PPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIF 257
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + S+P G + ++G+G+G G LN+PLP G+GD E++VP Q
Sbjct: 258 FLSTHQDG-----SYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQ 312
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D+ DP T Y + + ++ LA GGR + EGGY++
Sbjct: 313 RFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNL 372
>gi|68475296|ref|XP_718366.1| likely class II histone deacetylase subunit Hda1p [Candida albicans
SC5314]
gi|68475497|ref|XP_718271.1| likely class II histone deacetylase subunit Hda1p [Candida albicans
SC5314]
gi|46440031|gb|EAK99342.1| likely class II histone deacetylase subunit Hda1p [Candida
albicans SC5314]
gi|46440130|gb|EAK99440.1| likely class II histone deacetylase subunit Hda1p [Candida
albicans SC5314]
Length = 833
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 185/371 (49%), Gaps = 41/371 (11%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E ++ HPE+ RI I L I P++ A ++L
Sbjct: 136 SYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGPFMLKIPIREATSEEILQV 195
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ D++ + + + D +N S+ +A L+ G T+ A K V++G K
Sbjct: 196 HSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVK 255
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P G+C +N +A + L + ++V++D D+H+GNGT +
Sbjct: 256 NSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDIHHGNGTQK 315
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVH 258
FY +VL ISLH +G + P + G ++++GEG G G+ +NIP +G D YV+
Sbjct: 316 AFYNDPRVLYISLHRFENGKFYPG-TKYGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVY 374
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A +++ P I +F+P++I++ G D++ D G +T GY M ++ +A G+
Sbjct: 375 AFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIA----RGK 430
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP----IAYYPEDEAFPVKVIESIKQ 374
L ++ EGGY+ L + + L + L+ +P I P+ EA ++V++ + +
Sbjct: 431 LAVILEGGYN-------LDSISKSALAVAKVLVGEPPENTITLRPQAEA--IEVVDEVIK 481
Query: 375 YQNDVIPFLKG 385
Q+ L+
Sbjct: 482 IQSKYFKSLRN 492
>gi|390451247|ref|ZP_10236825.1| histone deacetylase superfamily protein [Nitratireductor
aquibiodomus RA22]
gi|389661269|gb|EIM72892.1| histone deacetylase superfamily protein [Nitratireductor
aquibiodomus RA22]
Length = 308
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 12/280 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-DKAGGKM 108
HPE DR++ IV L P + Y+ A +L H ++++++ + G +
Sbjct: 20 HPERPDRLRVIVDRLDDEPFA-YLERLEAPLADEETVLLAHPAEHLDKVKASIPDEGLAV 78
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ D T ++P S AAL A+G L+ + V G + RPPGHHA+ A G+C N
Sbjct: 79 IDDDTTVSPKSLEAALTAIGGALAGVDDVFSGEAGNVFVAGRPPGHHAEKNRAMGFCLFN 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA +A + A G ++ ++D DVH+GNGT + F+ VL S H P +P
Sbjct: 139 NAAIAARHAQKKHGAERIAIVDWDVHHGNGTQDIFWDDPSVLYCSTHQM-----PLYPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G G +N PLP G+G + A E V+PAI +F P++I++ G D+
Sbjct: 194 GAAHETGAGN----IVNAPLPAGSGSEAFREAFDEKVLPAIDRFAPDLIIISAGFDAHRR 249
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L D + ++ ADR S GR++ + EGGY
Sbjct: 250 DPLAELNLEADDFDWATGVLMERADRLSQGRVVSLLEGGY 289
>gi|254568172|ref|XP_002491196.1| Putative catalytic subunit of a class II histone deacetylase
complex [Komagataella pastoris GS115]
gi|238030993|emb|CAY68916.1| Putative catalytic subunit of a class II histone deacetylase
complex [Komagataella pastoris GS115]
gi|328352281|emb|CCA38680.1| histone deacetylase 6/10 [Komagataella pastoris CBS 7435]
Length = 741
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 186/370 (50%), Gaps = 55/370 (14%)
Query: 42 GFLEVLEKHPENSDRIKNIVSIL-KRGPIS-PYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + G I+ P +S + IP A ++L
Sbjct: 87 SYFEYIDPHPEDPRRIYRIYKILAENGLITDPTLSGIDQIGDYMLKIPVREATAEEILLV 146
Query: 90 HTPDYIN-----------ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
H+ +++ L+E + G D N S +A L+ G + A K V+
Sbjct: 147 HSEEHLKFIESTSSMSRERLLEETEKG-----DSVYFNHDSLLSAKLSCGGAIEACKAVV 201
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYG 195
+G K A A+VRPPGHHA+P G+C +N +A + L + K+VV+D DVH+G
Sbjct: 202 EGRVKNALAVVRPPGHHAEPDSPGGFCLFSNVAVAAKNILRNYPESVRKIVVLDWDVHHG 261
Query: 196 NGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGD 253
NGT + F+ +VL ISLH G + P + G D+ GE EG G N+NIP P G D
Sbjct: 262 NGTQKAFWEDPRVLYISLHRYEQGKYYPG-TKAGGADQCGENEGLGKNINIPWPVGGMND 320
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y++A ++V+P +++ P+++++ G D++ D G ++ GY +M +++SLA
Sbjct: 321 ADYLYAFRKVVMPVCREYAPDLLIISSGFDAAEGDIIGGCHISPAGYSQMTHMLKSLAR- 379
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPED------EAFPVK 367
G + +V EGGY+ L+ + N L++ + PE+ A ++
Sbjct: 380 ---GNVCVVLEGGYN-----------LDSIANSALSVTKVLLGESPEEPKVTVPSAHAIE 425
Query: 368 VIESIKQYQN 377
VI+ + + Q+
Sbjct: 426 VIDDVIKIQS 435
>gi|302525553|ref|ZP_07277895.1| acetoin dehydrogenase [Streptomyces sp. AA4]
gi|302434448|gb|EFL06264.1| acetoin dehydrogenase [Streptomyces sp. AA4]
Length = 417
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 152/318 (47%), Gaps = 30/318 (9%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
V WD +L +D G +HP N R+ V + + +
Sbjct: 33 VVWDPSLLKYDLGG----------------QHPFNPVRLDLTVRLATELGVLDGVELLVP 76
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGK----MVCDGTVLNPGSWGAALLAVGTTLSAM 134
A +LL H P+Y+ + EA G + D + PG A L VG+TL A
Sbjct: 77 TAAGDEELLRVHAPEYLAAVREAPNVGWDVGHGLGTDDNPVFPGMHDATALVVGSTLLAA 136
Query: 135 KHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDV 192
+ + DG + A + G HHA A G+C N+ +A+ L+ G ++ +D DV
Sbjct: 137 RKIADGEVRRAVNIA---GGLHHAMRDHASGFCIYNDCAIAISWLLDHGFDRIAYVDTDV 193
Query: 193 HYGNGTAEGFYRSNKVLTISLHMNHGS-WGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT 251
H+G+G FY +VLT+S+H + + W P G E+G+G+ G +N+PLP T
Sbjct: 194 HHGDGVQAAFYDDPRVLTVSMHQHPFTLW----PGTGYSAEIGKGKAAGTAVNVPLPPHT 249
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
D G++ A +V +Q+F+P ++V G DS DP L++DG+R + +R LA
Sbjct: 250 QDPGWLRAFDAVVPAVLQEFQPQLLVTQCGVDSHEEDPMADMSLSVDGHRTIYSTLRDLA 309
Query: 312 DRYSGGRLLIVQEGGYHV 329
+RY+ GR L V GGY +
Sbjct: 310 ERYANGRWLAVGGGGYQL 327
>gi|425465793|ref|ZP_18845100.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389831912|emb|CCI24942.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 305
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 157/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVEALKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPLEIRDEVLPLIKQVHNQDYVDILRRICQQGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPLP
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLPA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLEALAASVVATLEALL 305
>gi|365886054|ref|ZP_09425026.1| putative deacetylase [Bradyrhizobium sp. STM 3809]
gi|365338482|emb|CCD97557.1| putative deacetylase [Bradyrhizobium sp. STM 3809]
Length = 309
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DR++ + L + + A I L H Y+ EL + G +
Sbjct: 20 HPERADRLRAVEEALTEERFA-LLDRDEAPEADIELALLCHNEHYVTELRQMAPTSGIIY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A V+ G + A+ VRPPGHHA+ G+CF +
Sbjct: 79 LDGDTSMSPGTWEAVMRGVGGAVAATDSVMSGKHRNAFVAVRPPGHHAEIAKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A + G + +ID DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NVAIAARYAQRTFGIERAAIIDFDVHHGNGTQDIFWADKSVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E GE + +N PL + G + A L++P + KF P ++++ G D+
Sbjct: 194 GARGERGEHDTI---VNAPLASEDGSLEFRSAFENLILPQLTKFSPELVIISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDFGWVTRKLMELADKTAGGRVVSVLEGGY 290
>gi|238879680|gb|EEQ43318.1| histone deacetylase HDA1 [Candida albicans WO-1]
Length = 833
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 185/371 (49%), Gaps = 41/371 (11%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E ++ HPE+ RI I L I P++ A ++L
Sbjct: 136 SYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGPFMLKIPIREATSEEILQV 195
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ D++ + + + D +N S+ +A L+ G T+ A K V++G K
Sbjct: 196 HSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVK 255
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P G+C +N +A + L + ++V++D D+H+GNGT +
Sbjct: 256 NSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDIHHGNGTQK 315
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVH 258
FY +VL ISLH +G + P + G ++++GEG G G+ +NIP +G D YV+
Sbjct: 316 AFYNDPRVLYISLHRFENGKFYPGT-KYGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVY 374
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A +++ P I +F+P++I++ G D++ D G +T GY M ++ +A G+
Sbjct: 375 AFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIA----RGK 430
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP----IAYYPEDEAFPVKVIESIKQ 374
L ++ EGGY+ L + + L + L+ +P I P+ EA ++V++ + +
Sbjct: 431 LAVILEGGYN-------LDSISKSALAVAKVLVGEPPENTITLRPQAEA--IEVVDEVIK 481
Query: 375 YQNDVIPFLKG 385
Q+ L+
Sbjct: 482 IQSKYFKSLRN 492
>gi|427403231|ref|ZP_18894228.1| hypothetical protein HMPREF9710_03824 [Massilia timonae CCUG 45783]
gi|425717967|gb|EKU80921.1| hypothetical protein HMPREF9710_03824 [Massilia timonae CCUG 45783]
Length = 310
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 12/283 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE R+ ++ L++ P ++W Q+L H +Y++ + A G +
Sbjct: 20 HPEAPQRLHAVMQALRQ-PEFSRLAWREAPLGTRDQVLLVHGEEYVDAIAAAAPRSGLVA 78
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG T+++PGSW A + VG + + V+ G + RP GHHA+P A G+C
Sbjct: 79 LDGGDTLMSPGSWEAVMRCVGAACAGVDAVVAGEAANVFCATRPCGHHAEPERAMGFCIF 138
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N A +A AL + G +V V+D DVH+GNGT F+ ++ S H + P +P
Sbjct: 139 NQAAIAAVHALETHGLQRVAVVDFDVHHGNGTQAAFFHRPQLFFGSSHQS-----PLYPG 193
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G G +N+PLP G G + + ++PA+++F P +IV+ G D+
Sbjct: 194 TGAAGETGAS---GNIVNLPLPPGCGSALFRSTVASGLLPALRRFAPQLIVMSAGFDAHR 250
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP L + + + R V ++A GR++ + EGGY V
Sbjct: 251 SDPLASMALEDEDFAWITREVMAIAAEVCEGRIVSILEGGYSV 293
>gi|374849860|dbj|BAL52864.1| histone deacetylase [uncultured gamma proteobacterium]
Length = 308
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 148/313 (47%), Gaps = 33/313 (10%)
Query: 18 NVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHS 77
V+ L+HDTG G HPE+ R++ ++ L R P I W
Sbjct: 4 RVYTHPACLDHDTGPG----------------HPESRARLEVVLEALAR-PSFENIEWRI 46
Query: 78 GIPAQIPQLLSFHTPDYINELVEA-DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
A++ QL + HT +I + A K G + TV++PGSW AAL A G +A++
Sbjct: 47 APCARLEQLAAVHTASHIERIYAAIPKTGYAFLDPDTVVSPGSWEAALRAAGAVCAAVEA 106
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYG 195
VL G + A+ VRPPGHHA+ A G+C NN +A + A++ G +V ++D D H+G
Sbjct: 107 VLGGEAENAFCAVRPPGHHAEIGRAMGFCLFNNVAIAARHAIDRFGLKRVAIVDFDAHHG 166
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGT F KVL S H P +P G +E G G +N+PLP G
Sbjct: 167 NGTQAIFASEPKVLYASTHQF-----PLYPGTGRAEE----TGCGNLINVPLPPGATGAH 217
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
+ + ++PA+ F P +I++ G D+ DP CL + + + +
Sbjct: 218 FRAQVQARILPALLGFRPELILISAGFDAHLKDPLASLCLEEADFAWISAQLLAF----- 272
Query: 316 GGRLLIVQEGGYH 328
G L+ EGGYH
Sbjct: 273 GVPLVSSLEGGYH 285
>gi|372281825|ref|ZP_09517861.1| histone deacetylase superfamily protein [Oceanicola sp. S124]
Length = 308
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 139/282 (49%), Gaps = 14/282 (4%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
E HPE R+ ++S L+ + H A+ LL H YI+ + A+ A G+
Sbjct: 18 EGHPEQVARLSRVLSALE----GKALDRHEAPLAEEADLLLCHPQGYIDRVRGAEPAEGQ 73
Query: 108 MVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
+ D T ++PGS+ AAL + G ++A+ VLDG A+ RPPGHHA+ G+C
Sbjct: 74 VQMDPDTWMSPGSYRAALRSAGGAIAAVDAVLDGRADNAFVATRPPGHHAETESPMGFCL 133
Query: 167 LNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
N LA + AL G +V + D DVH+GNGT + ++L IS H P +P
Sbjct: 134 FGNVALAAKHALERRGLQRVAIFDPDVHHGNGTQDLVQSDPRILFISTHQQ-----PLYP 188
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G DE G + NIPL GT Y +T+ V+P I+ F P +I+L G D+
Sbjct: 189 GTGNRDEFGPHDTI---RNIPLSAGTDGEVYRMIVTQQVLPKIRSFAPELILLSSGFDAH 245
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L +R + V +LA GGRL+ EGGY
Sbjct: 246 RDDPLASISLETQDFRWLTDQVAALAGEVCGGRLVSCLEGGY 287
>gi|397780929|ref|YP_006545402.1| Histone deacetylase 18 [Methanoculleus bourgensis MS2]
gi|396939431|emb|CCJ36686.1| Histone deacetylase 18 [Methanoculleus bourgensis MS2]
Length = 330
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 151/301 (50%), Gaps = 17/301 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ R+K ++ + G + I+ +P + + + I L A G
Sbjct: 19 HPESEARLKAALAGVPGG--ARRIAPEQALPGDLALVHTHRQIAAIRSLCRACPPGRACY 76
Query: 110 CD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T L GS+ AAL A G A++ LDG + ++ALVRPPGHHA P A G+C N
Sbjct: 77 IDPDTYLTWGSFDAALYATGAAWQAVEQALDG--EHSFALVRPPGHHAMPDRAMGFCLFN 134
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
N +A AL +V ++D D+H+GNGT FY S++VL S+H P G
Sbjct: 135 NVAVATARALRE-VDRVAIVDWDLHHGNGTQTAFYTSDRVLYCSVHQMG-----VFPGTG 188
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
+E G G G GY +N PL +G+ Y + +PAI++FEP+++V+ GQD++ D
Sbjct: 189 WPEEQGSGPGVGYTINAPLESGSTGADYALVFRRIFLPAIRRFEPDLVVVSAGQDAAFDD 248
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY--CLHATLEGVLNL 346
P G L D + G + L + G L + EGGY +++A + A L+G
Sbjct: 249 PLGSMLLRPD---DFGVLTGMLLEARPGA-LALALEGGYGRSHAAAIGSIFAALDGARFT 304
Query: 347 P 347
P
Sbjct: 305 P 305
>gi|297798586|ref|XP_002867177.1| hypothetical protein ARALYDRAFT_913072 [Arabidopsis lyrata subsp.
lyrata]
gi|297313013|gb|EFH43436.1| hypothetical protein ARALYDRAFT_913072 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 149/300 (49%), Gaps = 23/300 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGI------PAQIPQLLSFHTPDYINELVEA 101
+ HPE S R+ IV+ L++ ++P + A I + + H Y+ L +A
Sbjct: 76 KSHPECSARVPAIVNALEKNELTPKFRGSQVLELANFKTATIEDIANVHDKAYVFGLEKA 135
Query: 102 -DKAG--GKMVCDG---TVLNPGSWGAALLAVGTTLSAMKHVLDGHGK-----IAYALVR 150
D+A G + +G T ++ +L+A G ++ + V+ +AL+R
Sbjct: 136 MDEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSPDPPTGFALIR 195
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A G +V +ID DVH+GNGT + F +
Sbjct: 196 PPGHHAVPKGPMGFCVFGNVAIAARHAQYTHGLKRVFIIDFDVHHGNGTNDAFSEDPDIF 255
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + S+P G + ++G+G+G G LN+PLP G+GD E++VP Q
Sbjct: 256 FLSTHQDG-----SYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMGTVFEEIIVPCAQ 310
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D+ DP T Y + R ++ LA GGR + EGGY++
Sbjct: 311 RFKPDLILVSAGYDAHVLDPLANLQFTTGTYYSLARDIKQLAKEVCGGRCVFFLEGGYNL 370
>gi|448684240|ref|ZP_21692705.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula japonica DSM 6131]
gi|445783113|gb|EMA33949.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula japonica DSM 6131]
Length = 335
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 153/300 (51%), Gaps = 16/300 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK 107
+HPE+ DR++ I LK Y++ A + + H DYI E E D GG
Sbjct: 17 RHPESPDRLRAIRRALKENHGVEYVA---ADDADVDLVREVHDTDYIAEFREFCDDGGGN 73
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYC 165
D TV +W AAL + G + + LDG+ ++L RPPGHHA A G+C
Sbjct: 74 WDAD-TVAVEETWDAALASAGLAVWVAEAALDGNSGRDTPFSLGRPPGHHAVGDDAMGFC 132
Query: 166 FLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
F+NNA +A Q AL + +V + D DVH+GNGT + FY + V S+H + +P
Sbjct: 133 FINNAAVAAQAALEADAERVAIFDWDVHHGNGTQDIFYDRSDVFYASIHED-----GLYP 187
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G ++E G G+ G NLN+ G Y+ A+ E + PA++ ++P+++++ G D+
Sbjct: 188 GTGDIEETGTGDADGTNLNVKYKPGADTADYLAAIDECIAPAMEDYDPDLLLISAGFDAH 247
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY---HVTYSAYCLHATLEG 342
DP R ++ +GY M +RSL D L I+ EGGY ++ S +H +G
Sbjct: 248 EHDPISRMRVSTEGYGAMTDRMRSLTDACDAA-LGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|421486035|ref|ZP_15933587.1| acetylpolyamine aminohydrolase [Achromobacter piechaudii HLE]
gi|400195816|gb|EJO28800.1| acetylpolyamine aminohydrolase [Achromobacter piechaudii HLE]
Length = 354
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 135/229 (58%), Gaps = 10/229 (4%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+ P +W +AL + + ++A HV G +AYAL RP GHHA A G+C+LN++ A
Sbjct: 131 IGPQTWRSALRSTHSAVAAADHVAS-IGGMAYALCRPSGHHAHRDRAGGFCYLNSSAAAA 189
Query: 175 QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELG 234
L + KV V+D+D H+G+GT FY + V+T+SLH + ++ P + G +E G
Sbjct: 190 SRLLQT-WSKVAVLDVDAHHGDGTQNIFYHRSDVMTVSLHADPSAYYPFY--TGYAEERG 246
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
+G+G GYNLN+PLP+G+G+ ++ A+ + + A++ + P +VL +G D+ DP
Sbjct: 247 QGQGEGYNLNLPLPHGSGNDPFLAAL-DTALTALRGYAPEALVLALGFDTYKDDPISVLK 305
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
L +D YR++G V SL G ++VQEGGY V L A L+G+
Sbjct: 306 LDIDAYRDIGARVASL-----GVPTVVVQEGGYMVQAIGPALDAFLQGM 349
>gi|302761220|ref|XP_002964032.1| hypothetical protein SELMODRAFT_166606 [Selaginella moellendorffii]
gi|300167761|gb|EFJ34365.1| hypothetical protein SELMODRAFT_166606 [Selaginella moellendorffii]
Length = 545
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 169/317 (53%), Gaps = 32/317 (10%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG-- 78
+DD ML H F +P HPE DR+++I++ + P G
Sbjct: 147 YDDRMLLHAE----FQMKSNP--------HPERPDRLRSILAGFTAAGLYP-----GGCI 189
Query: 79 -IPAQ---IPQLLSFHTPDYINELVEADKA-GGKMVCDGTVLNPGSWGAALLAVGTTLSA 133
IPA+ +L + HT +++ E+VEA + T N S AA LA G
Sbjct: 190 LIPAREITRVELETVHTHEHV-EVVEATSSLESSYFTSDTYANGHSALAARLAAGVCADL 248
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVH 193
+L G +ALVRPPGHHA+ G+C NNA +A + + +G KV+++D DVH
Sbjct: 249 ASAILSGQVDNGFALVRPPGHHAEGATVMGFCLHNNACIAAKASQAAGAKKVLIVDWDVH 308
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTG 252
+GNGT E F VL ISLH + G G +P +G E+G G G G+++NIP P +G G
Sbjct: 309 HGNGTQEIFEHDPSVLYISLHRHEG--GLFYPGSGAAHEVGSGPGEGFSINIPWPCSGIG 366
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y+ A +V+P ++F P++ ++ G D++ DP G +T G+ +M +++ ++
Sbjct: 367 DNDYIVAFQHIVLPIAKQFAPDITIVSAGFDAARGDPLGGCQVTPAGFAQMTQLLSTV-- 424
Query: 313 RYSGGRLLIVQEGGYHV 329
SGG+LL+V EGGY++
Sbjct: 425 --SGGKLLVVLEGGYNL 439
>gi|405970377|gb|EKC35286.1| Histone deacetylase 6 [Crassostrea gigas]
Length = 887
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 181/402 (45%), Gaps = 60/402 (14%)
Query: 1 MAASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIK-- 58
+A + EP G+I +D+ ML H K L+D + HPEN RI
Sbjct: 83 IALTVREPDPVEGTGLI---YDERMLKH---KNLWD-----------DHHPENPARISGP 125
Query: 59 -----NIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGT 113
+ I + + S I Q Q+L T + E+ + + D
Sbjct: 126 FKRCCELGLIDRCVRLEAQYSTEDMILLQHSQML-IETLKHTTEMNLEELRAEAIKYDSI 184
Query: 114 VLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLA 173
LN S+ ALL++G+T+ M+ +L + A++RPPGHHA +G+CF NN +A
Sbjct: 185 YLNNSSYECALLSLGSTVELMEQILKRKVRNGMAIIRPPGHHAMTEEFNGFCFFNNVAIA 244
Query: 174 VQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVD 231
+ AL N K+++ID DVH+G GT + FY +VL S+H G + P+ + D
Sbjct: 245 AKHALENLKLKKILIIDWDVHHGQGTQQMFYNDPRVLYFSIHRYEFGKFWPNL-RESDYD 303
Query: 232 ELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQ--------------------K 270
+GEG+G GYN+N+PL G D Y+ ++++P +
Sbjct: 304 FIGEGKGVGYNINVPLNQIGMADHDYLAIFHQILMPIASEFDPELVLISAGYDCAIGCPE 363
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
FEP ++++ G DS+ DP G+ +T + + V SLA GR+ ++ EGG
Sbjct: 364 FEPELVIVSAGYDSAIGDPKGQMGVTPAAFAHLTHKVMSLAQ----GRVAVILEGG---- 415
Query: 331 YSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESI 372
YCL + E LL DP P + V ESI
Sbjct: 416 ---YCLKSLTESAAMTLRTLLGDPCPRIPPSQEPCDSVTESI 454
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 143/346 (41%), Gaps = 77/346 (22%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ +D+GM H T + HPE DRI I ++ +
Sbjct: 545 IAYDEGMRAHYTSSSYY--------------HPEAPDRITRIFDKHTEWGLTQRCTRVET 590
Query: 79 IPAQIPQLLSFHTPDYINEL--------VEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
A +L H+ Y+NE+ E K K L S+ A +A G
Sbjct: 591 RMATEAELALIHSTTYLNEIKSLEDKNPFELKKLERKF--QSIYLCRDSYFCARMAAGFV 648
Query: 131 LSAMKHVLD------------------GH------------GKIAYALVRPPGHHAQPTM 160
L + +V+ GH KI + RPPGHHA+ T
Sbjct: 649 LDVVDNVMTEQHPVLMYVSPANQSYLLGHFRHPDNWFPIPLTKIFEWISRPPGHHAECTE 708
Query: 161 ADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
A G+CF NN +A + A N KV+++D D+H+GNGT FY VL ISLH + G
Sbjct: 709 AMGFCFFNNIAIAAKYAQNKYNVKKVLIVDWDIHHGNGTQRQFYDDPSVLFISLHRYDRG 768
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ PS PQ G P+ GD Y+ A ++V+P +F P ++++
Sbjct: 769 FFYPSSPQ-------------GCQTMGPM----GDSEYIAAFQQIVMPIAYEFGPELVLV 811
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
G D++ DP G +T GY M ++ SLA+ GR+++ E
Sbjct: 812 SAGFDAALGDPLGNYLVTPLGYGHMTHMLSSLAN----GRVILALE 853
>gi|220906209|ref|YP_002481520.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7425]
gi|219862820|gb|ACL43159.1| histone deacetylase superfamily [Cyanothece sp. PCC 7425]
Length = 306
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 155/334 (46%), Gaps = 37/334 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ V + D L H TG HPE +R+K IV L+ P + ++ W
Sbjct: 4 VAVIYSDQFLLHQTGP----------------YHPERPERLKAIVQTLQAAPWAEHLHWR 47
Query: 77 SGIPAQI----PQLLSFHTPDYINELVE-ADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
S P + P + H +Y+ + AD+ GG + D T+++P S+ ALLAV L
Sbjct: 48 SPTPITVRDPRPLIQQVHQLEYLQTVQRLADQGGGALDPD-TMVSPDSYEVALLAVNAWL 106
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDI 190
+ VL + A+ L RPPGHHA + G+C NA +A AL +G +V ++D
Sbjct: 107 DGVDQVLTT-AEPAFVLARPPGHHALRSRGMGFCLFGNAAIAAHYALRQTGIHRVAILDW 165
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT ++ SLH P +P G E G GF LN+PLP G
Sbjct: 166 DVHHGNGTQALVESHPQIAYCSLHQ-----APYYPYTGEASERG---GFDNVLNLPLPAG 217
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
+ + Y VVP +++F P+++++ G D++ DP L + Y SL
Sbjct: 218 SSRQDYEPQFRHQVVPFLEQFSPDLLIISAGYDANRDDPLSSMALLPEDYGFFTDCCLSL 277
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
R G EGGY + A+ + ATLE L
Sbjct: 278 TRRVVFGL-----EGGYDLNSLAHSVAATLERCL 306
>gi|344233841|gb|EGV65711.1| hypothetical protein CANTEDRAFT_118275 [Candida tenuis ATCC 10573]
Length = 717
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 167/327 (51%), Gaps = 31/327 (9%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I L + P +S IP A ++L
Sbjct: 35 SYFEYIDPHPEDPRRIYRIYKKLAEAGLITDPSLSGTDDLGPLMMKIPIREASDEEILLV 94
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ + + + D +N S+ +A L+ G ++ A K V+ G K
Sbjct: 95 HSEEHLKYIASTETMSRDKLLEETETGDSIYVNNDSYLSAKLSCGGSIEACKAVISGQVK 154
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P G+C +N +A + L K+V++D D+H+GNGT +
Sbjct: 155 NSMAIVRPPGHHAEPDTPGGFCLFSNVAVAAKTMLKLFPDSVRKIVIVDWDIHHGNGTQK 214
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
FY +VL ISLH +G + P + G+ GE EG G+N+NIP GTGD YV+
Sbjct: 215 AFYNDPRVLYISLHRYENGRFYPG-TKAGSHKMCGEEEGEGFNMNIPWRAPGTGDGDYVY 273
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A +LV+P I +F+P+ I++ G D++ D G +T GY M +++ +A G+
Sbjct: 274 AFNKLVIPVISEFDPDFIIVSSGFDAADGDIVGGCHVTPAGYGYMTHMLKGIA----RGK 329
Query: 319 LLIVQEGGYH---VTYSAYCLHATLEG 342
L ++ EGGY+ ++ SA + L G
Sbjct: 330 LSVILEGGYNLDSISKSALAVAKVLLG 356
>gi|427781123|gb|JAA56013.1| Putative histone deacetylase domain protein [Rhipicephalus
pulchellus]
Length = 471
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 145/270 (53%), Gaps = 19/270 (7%)
Query: 90 HTPDYINELVEADKAGG--KMVCDGTVLNPGSW------GAALLAVGTTLSAMKHVLDGH 141
HT D+I EL+ A + ++ + L+P + A LA G L A+ V+ G
Sbjct: 63 HTKDHI-ELIRATEKMSLEEVTLENHRLDPVTTICQETNQCARLACGCLLQAVDAVVSGK 121
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ AL+RPPGHH+ G+C NNA +A + A+ G ++++ D DVH+GNGT +
Sbjct: 122 CRNGVALIRPPGHHSAADTVSGFCIFNNAAVAARYAMQRYGLKRILIFDWDVHHGNGTQD 181
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDE--LGEGEGFGYNLNIPLPN-GTGDRGYV 257
FY SN VL ISLH S P+ D +G G+G GYN+NIP D Y+
Sbjct: 182 IFYDSNSVLYISLH--RYSKEKIFPKTEISDAAYVGRGDGRGYNINIPWTKPAITDADYL 239
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
AM +LV+P +F+P ++++ G DS+ D G C+T GY+ M ++++LA G
Sbjct: 240 TAMYQLVMPVASEFDPELVIVSAGFDSAKGDILGDCCVTPAGYQHMTSLLKNLAH----G 295
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
R++I EGGY+V A L A + ++ P
Sbjct: 296 RVIIQLEGGYNVDVVAESLAACMATLMGDP 325
>gi|426197573|gb|EKV47500.1| hypothetical protein AGABI2DRAFT_118070 [Agaricus bisporus var.
bisporus H97]
Length = 707
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 149/291 (51%), Gaps = 16/291 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I +L + W P + L HT D+ +++ + +
Sbjct: 108 HPEQPQRIVRIWKMLSDYHYIKRMLWLPIRPVTREEALLVHTEDHWDKVQAIQYMTDQQI 167
Query: 110 CDGTV--------LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
D + G+ AALL+ G + A V G K A+VRPPGHHA+P
Sbjct: 168 VDSEAYYEQLSLYVMAGTTRAALLSCGGVIEAALAVAQGRLKKTLAIVRPPGHHAEPDEH 227
Query: 162 DGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+CF NN +A ++ + K++++D DVH+GNGT F VL ISLH G+
Sbjct: 228 MGFCFFNNIAVAARVVQQLTPIKKILILDWDVHHGNGTQRAFNDDPSVLYISLHRYEQGN 287
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P+ P G++ GE G GY++N+P P G GD Y++A ++++P +F P+++++
Sbjct: 288 FYPTGP-FGSMQSCGEEAGLGYSVNVPWPCAGVGDADYIYAFQKVILPIGLEFAPDLVMI 346
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
G D++A D G +T GY M ++ LA+ GR+++ EGGY++
Sbjct: 347 SAGFDAAAGDELGECLVTPAGYAHMTHMLAGLAN----GRMVVALEGGYNL 393
>gi|336323698|ref|YP_004603665.1| histone deacetylase superfamily protein [Flexistipes sinusarabici
DSM 4947]
gi|336107279|gb|AEI15097.1| histone deacetylase superfamily [Flexistipes sinusarabici DSM 4947]
Length = 335
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 150/300 (50%), Gaps = 10/300 (3%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQ----IPQLLSFHTPDYINELVEADK 103
EKHPE+ R+K++ + L + + + A+ I ++ H+P YI +
Sbjct: 17 EKHPEHPSRLKSVYNHLLESDLVK-TDRVNAVKAEFNYDISRIARIHSPGYIENFKKESN 75
Query: 104 AGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
G + V++ S+ A+ + + L A +L+G K + RPPGHHA + A
Sbjct: 76 TGNSYFQNKENVIDSTSFATAVKSCFSGLYASDLLLNGDFKQLFVASRPPGHHADYSRAY 135
Query: 163 GYCFLNNAGLAVQLALNSGC-GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWG 221
G+CF NN + + L+S K+++IDIDVH+GNGT FY S V S+H H ++
Sbjct: 136 GFCFFNNVAITAKYLLDSKVFQKIMIIDIDVHHGNGTQNIFYDSKNVFYYSIH-EHPTF- 193
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P G + G+ G G+ LN P+ +GD Y + + PA+ +F+P +I++ G
Sbjct: 194 -LFPGTGRFFDTGKNSGKGFTLNSPMKPESGDDDYFKELLNKLYPAVCEFKPEIILVSAG 252
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
D D G L+ +G+R + ++ LA Y R++I EGGY A C+ TL+
Sbjct: 253 YDGHKDDIMGDISLSTNGFRRIFYALKYLAAEYCEDRIMIFLEGGYEPEVLASCVLNTLD 312
>gi|427417461|ref|ZP_18907644.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 7375]
gi|425760174|gb|EKV01027.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 7375]
Length = 316
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 160/332 (48%), Gaps = 33/332 (9%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + D L+HDTG G HPEN+ R+ +V+ LK + + W
Sbjct: 8 FRIIYSDRFLDHDTGPG----------------HPENAGRLTAVVTALKAHAMGNQLEWV 51
Query: 77 SGIPAQ-IPQLLSFHTPDYINELVE-ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
+ + + H P Y+ L A++ GG++ D T ++ S+ ALLAV L +
Sbjct: 52 EPCDRNPLDWINAVHDPAYVLTLQRIAERGGGRLDAD-TPVSAASYQIALLAVSAWLDGV 110
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVH 193
+V D G + L RPPGHHA+ + G+C L+N +A + AL G +V ++D DVH
Sbjct: 111 DYVTDNQGASGFVLARPPGHHAEYSQGMGFCLLSNVAIAARYALEKPGIDRVAILDWDVH 170
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
+GNGT + +++ SLH P++P G E G G LNIP+ +G+
Sbjct: 171 HGNGTQQLVSNQRQIVYCSLHQM-----PAYPGTGQAGETGM---HGNVLNIPMASGSTV 222
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
+ Y H + VVP Q+F+P+++++ G D++A DP L Y + +A
Sbjct: 223 KDYKHRFEQQVVPFFQQFQPDLLLVSAGYDANASDPLAGIDLMPADYGFLAAACHKVAP- 281
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
R+L EGGY + + AT+E VL
Sbjct: 282 ----RVLFGLEGGYDYQALSQSVIATIEAVLQ 309
>gi|88602015|ref|YP_502193.1| histone deacetylase superfamily protein [Methanospirillum hungatei
JF-1]
gi|88187477|gb|ABD40474.1| histone deacetylase superfamily [Methanospirillum hungatei JF-1]
Length = 322
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 144/297 (48%), Gaps = 23/297 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
E +PE DR+K L + I + + I Q+ HTP+YIN ++
Sbjct: 15 ENYPECPDRVKVTAQYLIKNDIKMFTEPRVFDESWIQQV---HTPEYINNIITTGSVDYS 71
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ + AL + L+A + ++ + A+ L RPPGHH G+C+L
Sbjct: 72 DI---------HYEHALKSAFGCLTAGEMLIQDEAQNAFVLNRPPGHHTYADRGGGFCYL 122
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NNA + + G K+++ID D H+GNGT FY VL S+H + P +P
Sbjct: 123 NNAAILARYLQMHGMEKIMIIDWDAHHGNGTESIFYDDPSVLYTSIHQS-----PLYPGT 177
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G + + G G+G GY +NIP+P GTG Y+ +E+++PA ++F P+ +V+ GQDS
Sbjct: 178 GEIQDTGVGQGEGYTINIPVPPGTGHNSYMKIFSEIILPAGKQFHPDAVVISAGQDSHKK 237
Query: 288 DPNGRQCLTMDGYREMGR-IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
DP CL Y M R I+ S+ G V EGGY++ +HA + +
Sbjct: 238 DPLSSLCLCSGSYYTMTRQILTSITPNVIG-----VLEGGYNLASLPVSVHAIVTAL 289
>gi|334350414|ref|XP_001371963.2| PREDICTED: histone deacetylase 6-like [Monodelphis domestica]
Length = 1117
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 157/321 (48%), Gaps = 14/321 (4%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN------ELVEA 101
E PE +R++ + L R + PA +L H+ +Y++ ++ E+
Sbjct: 152 ESFPERPERLQAVQEQLARDCLLERCLLIEAQPATPEELQLVHSQEYVDLMASTPQMTES 211
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
++ D L+P S+ ALLA G L + ++ G + A+VRPPGHHAQ
Sbjct: 212 ERRALSDTYDSVYLHPNSFPCALLATGALLRLVDALMTGEIRNGLAVVRPPGHHAQRESM 271
Query: 162 DGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH-GS 219
+GYC NN +A + A +++++D DVH+G GT F + VL S+H G
Sbjct: 272 NGYCMFNNIAIAARYAQERHHVARILIVDWDVHHGQGTQFIFEQDPSVLCFSVHRYELGR 331
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P H + G G+G GY +N+P G D Y+ A +++P +F+P M+++
Sbjct: 332 FWP-HLEASDWRATGHGKGQGYTVNVPWNQVGMRDGDYITAFLHVLLPIALEFQPQMVLV 390
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D+ DP G T G+ + ++ LA GRL++ EGGY++ A + A
Sbjct: 391 AAGFDAMLGDPKGEMAATPGGFAHLTHLLMGLAK----GRLILSLEGGYNLHSLALGVSA 446
Query: 339 TLEGVLNLPLALLSDPIAYYP 359
TL+ +L P +L+ P A P
Sbjct: 447 TLQTLLGDPCPMLATPCAPCP 467
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 160/313 (51%), Gaps = 17/313 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK-M 108
HPE +RI I ++P A +LL+ H+ +YI + + +
Sbjct: 549 HPERPERIAQIAQHHMELGLTPRCFVLPARSATNQELLACHSEEYIERIRATSGLKPRDL 608
Query: 109 VCDGTVLN-----PGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+GT N P S+ A LA G ++ +L + A+VRPPGHHA+ A G
Sbjct: 609 HREGTSYNSIYISPHSFCCAQLAAGAACRLVEAILAREVQNGLAIVRPPGHHAERDAACG 668
Query: 164 YCFLNNAGLAVQLA--LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A + +++++D D+H+GNGT F VL +SLH +HG++
Sbjct: 669 FCFFNSVAVAARHAQEVAGRALRILIVDWDIHHGNGTQHIFEEDPSVLYVSLHRYDHGAF 728
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P ++G +G G+G G+N+N+ NG GD Y+ AM +V+P +F P ++++
Sbjct: 729 FPM-AEDGASSHVGRGQGEGFNVNVAW-NGPRLGDPDYLTAMHHIVMPIAYEFNPELVLV 786
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ +GY M ++ LA GGR+ +V EGGY++T + + A
Sbjct: 787 SAGFDAARGDPLGGCLVSPEGYAHMTHLLMGLA----GGRIALVLEGGYNLTSISESMAA 842
Query: 339 TLEGVLNLPLALL 351
+L P L+
Sbjct: 843 CTRTLLGDPPPLM 855
>gi|291449725|ref|ZP_06589115.1| histone deacetylase-like amidohydrolase [Streptomyces albus J1074]
gi|421743543|ref|ZP_16181600.1| deacetylase, histone deacetylase/acetoin utilization protein
[Streptomyces sp. SM8]
gi|291352674|gb|EFE79576.1| histone deacetylase-like amidohydrolase [Streptomyces albus J1074]
gi|406688034|gb|EKC91998.1| deacetylase, histone deacetylase/acetoin utilization protein
[Streptomyces sp. SM8]
Length = 382
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 28 HDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLL 87
HD G G PG +E L + + D ++ +++ + + + + +PA +LL
Sbjct: 17 HDPGAGSGYLPVGPG-IEPLRQFAVDPD-LRRAEGLVRASGVMDHFTAVTPLPATDEELL 74
Query: 88 SFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYA 147
H P+++ + A AG +N S AA LA G A V++G + Y
Sbjct: 75 RVHVPEHLERVEAASAAGAGDAGVYAHVNYHSAHAARLAAGACAQAATAVVEGRFERVYC 134
Query: 148 LVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNK 207
LVRPPGHHA+P A C NN +A + A G +V+V+D DVH+GNG FY
Sbjct: 135 LVRPPGHHAEPDRAMALCLYNNLAVAARAAQRHGVRRVLVLDWDVHHGNGLQRVFYDDPD 194
Query: 208 VLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPA 267
VL ISLH + G +G V E G G+G G LN+PLP G+G Y+ A+ ++V PA
Sbjct: 195 VLYISLHQD----GLFPAASGRVLETGTGKGTGRTLNVPLPAGSGHGAYLAALDQVVEPA 250
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+ F P +I++ G D+ A DP GR T + + + LAD +GGR++ EGGY
Sbjct: 251 ARAFRPELILVAAGVDAGAHDPMGRMMCTSRTFHALSSALCRLADELAGGRIVFAHEGGY 310
Query: 328 HVTYSAYCLHATLEGVLNLP 347
Y + AT + LP
Sbjct: 311 SAWYQPTLVLATAAAIAGLP 330
>gi|158521985|ref|YP_001529855.1| histone deacetylase superfamily protein [Desulfococcus oleovorans
Hxd3]
gi|158510811|gb|ABW67778.1| histone deacetylase superfamily [Desulfococcus oleovorans Hxd3]
Length = 345
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 161/330 (48%), Gaps = 24/330 (7%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + DD L H TG HPE+ R+ +I ++ R + ++
Sbjct: 5 VAISRDDRFLLHKTGHA----------------HPESPSRLASIYRMVDRH-FAGTVTTM 47
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
+ PA + QL HTP ++ ++++ + + T ++ S+ AA LA G + +
Sbjct: 48 TPEPATLDQLELVHTPGHVKKILKTAEHKITSMAPDTPVSGHSYLAAWLAAGACMQGVDL 107
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYG 195
+L G + ++LVRPPGHHA P A G+C LNN +A + A + +++++D DVH+G
Sbjct: 108 LLSGACRAFFSLVRPPGHHALPDRATGFCLLNNLAIAARYARMRYNLERILIVDWDVHHG 167
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NG + FYR V +S H P +G + GE G G+ LN+PL GD
Sbjct: 168 NGIHDIFYREPGVFYVSSHDLM-----LFPYSGEAGDTGEAGGRGFTLNMPLSRSFGDGD 222
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
+ ++ P + + P+M+++ G D+ A DP GR + + Y + R+V LAD
Sbjct: 223 MAYIYRTVLTPVFRWYTPSMVMIAAGFDAHADDPLGRSAWSENAYFLLARLVCELADA-D 281
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
LL+ EGGY +A A LE +++
Sbjct: 282 HVPLLLSLEGGYDPGANAASAKAVLEALVS 311
>gi|365881077|ref|ZP_09420408.1| putative deacetylase [Bradyrhizobium sp. ORS 375]
gi|365290785|emb|CCD92939.1| putative deacetylase [Bradyrhizobium sp. ORS 375]
Length = 309
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DR++ + L + + A I L H Y+ EL + G +
Sbjct: 20 HPERADRLRAVEEALAEERFA-LLDRDEAPEADIELALLCHNEHYVTELRQMAPTSGIIY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A + V+ G + A+ RPPGHHA+ G+CF +
Sbjct: 79 LDGDTSMSPGTWEAVMRGVGGAVAATESVMSGRHRNAFVATRPPGHHAEIAKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A + G + +ID DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NVAIAARYAQRTFGIERAAIIDFDVHHGNGTQDIFWADKSVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E GE + +N PL + G + A L++P + KF P ++++ G D+
Sbjct: 194 GARGERGEHDTI---VNAPLASEDGSLEFRSAFENLILPQLTKFSPELVIISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDFGWVTRKLMELADKTAGGRVVSVLEGGY 290
>gi|427781125|gb|JAA56014.1| Putative histone deacetylase domain protein [Rhipicephalus
pulchellus]
Length = 471
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 145/270 (53%), Gaps = 19/270 (7%)
Query: 90 HTPDYINELVEADKAGG--KMVCDGTVLNPGSW------GAALLAVGTTLSAMKHVLDGH 141
HT D+I EL+ A + ++ + L+P + A LA G L A+ V+ G
Sbjct: 63 HTKDHI-ELIRATEKMSLEEVTLENHRLDPVTTICQETNQCARLACGCLLQAVDAVVSGK 121
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ AL+RPPGHH+ G+C NNA +A + A+ G ++++ D DVH+GNGT +
Sbjct: 122 CRNGVALIRPPGHHSAADTVSGFCIFNNAAVAARYAMQRYGLKRILIFDWDVHHGNGTQD 181
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDE--LGEGEGFGYNLNIPLPN-GTGDRGYV 257
FY SN VL ISLH S P+ D +G G+G GYN+NIP D Y+
Sbjct: 182 IFYDSNSVLYISLH--RYSKEKIFPKTEISDATYVGRGDGRGYNINIPWTKPAITDADYL 239
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
AM +LV+P +F+P ++++ G DS+ D G C+T GY+ M ++++LA G
Sbjct: 240 TAMYQLVMPVASEFDPELVIVSAGFDSAKGDILGDCCVTPAGYQHMTSLLKNLAH----G 295
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
R++I EGGY+V A L A + ++ P
Sbjct: 296 RVIIQLEGGYNVDVVAESLAACMATLMGDP 325
>gi|429848508|gb|ELA23980.1| histone deacetylase, partial [Colletotrichum gloeosporioides Nara
gc5]
Length = 651
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 170/333 (51%), Gaps = 44/333 (13%)
Query: 50 HPENSDRIKNIVSILKRGPI-----------------SPYISWHSGIPAQIPQLLSFHTP 92
HPE+ RI+ I KR + + Y+ A ++L+ HTP
Sbjct: 93 HPEDPRRIEEIFKAFKRAGLVYTGPEANVAQVLRDTPTKYMWRIGAREATKAEILTTHTP 152
Query: 93 D---YINELVEADKAG----GKMVCDGTV-LNPGS--WGAALLAVGTTLSAMKHVLDGHG 142
D ++ +L D A K G L GS + A+LL+ G + KHV++G+
Sbjct: 153 DHYRWVEDLSRMDYATLRETSKQYDQGRASLYVGSLTFTASLLSCGGAIDTCKHVVEGNV 212
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTA 199
K A+A++RPPGHHA+ G+CF NN +AV++ + C KV+++D DVH+GNG
Sbjct: 213 KNAFAVIRPPGHHAEYDQPLGFCFFNNVPVAVKICQQEYPADCRKVLILDWDVHHGNGIQ 272
Query: 200 EGFYRSNKVLTISLHM-NHGSWGPSHPQN-----GTVDELGEGEGFGYNLNIPLPN-GTG 252
FY VL ISLH+ +G + P P N G ++ G G G G N+NI + G G
Sbjct: 273 NIFYDDPNVLYISLHVYQNGIFYPGKPDNQDIPDGGLEHCGTGPGLGKNINIGWHDQGMG 332
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y+ A ++++P ++F P+++V+ G D++A D G +T Y M ++ SLAD
Sbjct: 333 DGEYMAAFQKIIMPIAKEFNPDLVVISAGFDAAAGDELGGCFVTPTCYAHMTHMLMSLAD 392
Query: 313 RYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
G++ + EGGY+ ++ SA + TL G
Sbjct: 393 ----GKVAVCLEGGYNLQAISTSAVAVARTLMG 421
>gi|448508263|ref|XP_003865908.1| Hda1 hypothetical proteinistone deacetylase [Candida orthopsilosis
Co 90-125]
gi|380350246|emb|CCG20467.1| Hda1 hypothetical proteinistone deacetylase [Candida orthopsilosis
Co 90-125]
Length = 838
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 184/367 (50%), Gaps = 33/367 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E + HPE+ RI I L + PY+ A ++L
Sbjct: 161 SYFEYTDPHPEDPRRIYRIYKKLVEAGLVQDYSLSGIDELGPYMQKIPIREALADEILEV 220
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ + + + D +N S+ +A L+ G + A K V++G K
Sbjct: 221 HSEEHLKHIQSTETMTKDELLKETANGDSIYVNNDSFFSAKLSCGGAIEACKAVVEGRVK 280
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A VRPPGHHA+P G+C +N +A + L S ++VV+D D+H+GNGT +
Sbjct: 281 NSLAAVRPPGHHAEPDSPGGFCLFSNVAVAAKNILKSYPESVRRIVVLDWDIHHGNGTQK 340
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVH 258
FY +VL ISLH +G + P + G D++GEG G G+NLNIP +G D YV+
Sbjct: 341 AFYDDPRVLYISLHRYENGKFYPG-TKYGGADQVGEGAGEGFNLNIPWRSHGMHDGDYVY 399
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++++P + +++P++I++ G D++ D G ++ GY M +++++A G+
Sbjct: 400 AFNKVIIPVMLEYDPDLIIVSSGFDAADGDVIGACHVSPAGYGYMTHLLKAIA----RGK 455
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQND 378
L ++ EGGY++T + A + +L P + I P +A ++VI+ + + Q+
Sbjct: 456 LAVILEGGYNLTSISNSALAVAKVLLGEP---PENTIKKQPHGDA--IEVIDEVTKIQSK 510
Query: 379 VIPFLKG 385
LK
Sbjct: 511 YWKCLKA 517
>gi|407784170|ref|ZP_11131352.1| histone deacetylase superfamily protein [Oceanibaculum indicum P24]
gi|407198026|gb|EKE68070.1| histone deacetylase superfamily protein [Oceanibaculum indicum P24]
Length = 347
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 10/213 (4%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+ G+W + T L+A HV G + AYAL RPPGHHA ++ G+CFLNN+ +A
Sbjct: 126 IGAGTWEGVYWSAQTALAAAAHVESGE-RSAYALCRPPGHHAYHDLSGGFCFLNNSAIAA 184
Query: 175 QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELG 234
Q AL + G+V ++D+DVH+GNGT FY + VLT+SLH + S+ P + G DE G
Sbjct: 185 Q-ALLAKFGRVAILDVDVHHGNGTQGIFYGRDDVLTVSLHGDPTSFYPWY--TGFEDERG 241
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
EG G G NLNIPLP GTGD Y+ A+ E + A++ F+P +V+ +G D+S DP
Sbjct: 242 EGIGTGCNLNIPLPQGTGDDAYLEAL-EPALAAVKAFQPGALVVALGLDASEADPLRFFH 300
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+T G+ +G + L G ++VQEGGY
Sbjct: 301 ITTPGFGRIGAAIAGL-----GLPSVLVQEGGY 328
>gi|389681584|ref|ZP_10172929.1| acetylpolyamine aminohydrolase [Pseudomonas chlororaphis O6]
gi|388555120|gb|EIM18368.1| acetylpolyamine aminohydrolase [Pseudomonas chlororaphis O6]
Length = 341
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 128/226 (56%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGELTWRSAYWSAQSAIAGARALLDGE-PAAYALCRPPGHHARAEAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNNA +A Q+ L +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYLNNAAIAAQV-LREKFARVAVLDTDMHHGQGIQEIFYERDDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G GYNLN+P+ +G + ++ A E + A++ F+ ++VL +G D
Sbjct: 225 --VAGFADERGSGAGLGYNLNLPMAHGASEADFL-AQLETALAAVKTFDAQVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T G+ +G +RSL G LIVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTRAGFARLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|414171844|ref|ZP_11426755.1| hypothetical protein HMPREF9695_00401 [Afipia broomeae ATCC 49717]
gi|410893519|gb|EKS41309.1| hypothetical protein HMPREF9695_00401 [Afipia broomeae ATCC 49717]
Length = 309
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 141/280 (50%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ I L P + + + A + + H+ +YI+EL G +
Sbjct: 20 HPERPDRLRAIEQGLSAEPFTSLVRVEAP-EADLDVVALCHSNEYIDELRHISPKEGMIY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W AAL A G ++A+ V+ A+ RPPGHHA+ + G+CF +
Sbjct: 79 LDGDTTMSPGTWEAALRATGGAVAAVDAVMKNKRTNAFVGTRPPGHHAETSRPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
+A +A + A G + V+D DVH+GNG+ E F+ V+ S H P P
Sbjct: 139 SAAIAARYAQRKYGIARACVVDFDVHHGNGSQEIFWSDPSVMYASTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL G G R + A ++P ++ F P +IV+ G D+
Sbjct: 194 GATQERGDQDTV---VNAPLRPGNGSREFREAFDIAILPRLEAFAPELIVISAGFDAHWR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G L + + + R + +AD+ + GR++ V EGGY
Sbjct: 251 DPLGSLELREEDFAWVTRKLMEIADKSAEGRIVSVLEGGY 290
>gi|327264204|ref|XP_003216905.1| PREDICTED: histone deacetylase 6-like [Anolis carolinensis]
Length = 1138
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 144/281 (51%), Gaps = 14/281 (4%)
Query: 85 QLLSFHTPDYI------NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
++L H+P+Y+ + +A+ D L+P S+ A LA G+ L ++ V
Sbjct: 177 EILLAHSPEYLALMKSTETMSKAELKSLSDTFDSVYLHPNSYHCACLAAGSVLQVVEKVW 236
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNG 197
G A+VRPPGHHAQ DGYC NN G+A Q A G +V+++D DVH+G G
Sbjct: 237 SGELCNGLAVVRPPGHHAQHDKMDGYCMFNNVGIAAQYARQKLGVDRVLIVDWDVHHGQG 296
Query: 198 TAEGFYRSNKVLTISLHMNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRG 255
T F + V S+H G++ P P++ + +G G G GYN+N+P G GD
Sbjct: 297 TQYLFEDNPSVCYFSIHRYEGGNFWPHLPESDS-HAVGRGRGEGYNINVPWDQIGMGDAD 355
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y+ A +++P +F+P ++++ G DS DP G T + + ++ L S
Sbjct: 356 YLAAFLHILMPVALEFQPQLVLVAAGFDSVIGDPKGEMATTPGCFAHLAHLLMPL----S 411
Query: 316 GGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
GG+L++ EGGY++ A L+ +L P LL P+A
Sbjct: 412 GGKLVLSLEGGYNLQSLAEGTCTVLKALLGDPCPLLDSPLA 452
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 42/307 (13%)
Query: 2 AASPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIV 61
AA +P P+ GI+ +D+ M+ H ++D+ +HPE R+ I
Sbjct: 509 AAELMKPLPPSRTGIV---YDEKMMEH---YNMWDS-----------QHPELPQRVSRIF 551
Query: 62 SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV------------EADKAGGKMV 109
++ S A +L H+ Y+ + + D+ +
Sbjct: 552 QRHGELRLTERCCRLSARLASEEELRMCHSLAYVETVKSTATMKPRDLHRQGDQYNSIFI 611
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
C S+ A LA G+ SA++ VL G + A A+VRPPGHHA+ A G+CF N+
Sbjct: 612 CTS------SYECARLAAGSAFSAVEAVLSGEVQNAVAIVRPPGHHAESDTACGFCFFNS 665
Query: 170 AGLAVQLA--LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ 226
L+ + A L +V+++D DVH+GNGT F VL IS+H ++G++ P+ +
Sbjct: 666 VALSARYAQRLTGRPMRVMILDWDVHHGNGTQHMFENDPSVLYISIHRYDNGTFFPTS-E 724
Query: 227 NGTVDELGEGEGFGYNLNIP--LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
+ D++G G G G+ LN+P P GD Y+ A ++V+P +F P ++++ G D+
Sbjct: 725 DADYDQVGLGPGKGFTLNVPWNCPR-MGDPEYLAAFHQIVMPVAYEFNPELVLVSAGFDA 783
Query: 285 SAFDPNG 291
+ DP G
Sbjct: 784 ARGDPLG 790
>gi|284044231|ref|YP_003394571.1| histone deacetylase [Conexibacter woesei DSM 14684]
gi|283948452|gb|ADB51196.1| Histone deacetylase [Conexibacter woesei DSM 14684]
Length = 368
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 125/239 (52%), Gaps = 7/239 (2%)
Query: 105 GGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
GG D + + AA L+ G ++A+ VLDG + A+A PPGHHA+ +A G
Sbjct: 87 GGPWAFDFAPVTFATADAARLSAGCGVAAVDAVLDGRVRRAFAQTHPPGHHAERALAAGS 146
Query: 165 CFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
+LN A A G +V+++D DVH GNG + F VL +S+H + W P H
Sbjct: 147 SYLNTVACAAAHARARGAERVLIVDWDVHIGNGAEQIFADDPSVLALSIHQD--GWYPDH 204
Query: 225 PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
G V G +N+PLP GD GY+ + +V P ++F P+ IV+ GQD
Sbjct: 205 --AGDVASRGADS---TTVNVPLPPAVGDDGYLLVLEAVVAPIARRFAPDAIVVAAGQDI 259
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
FDP GR ++ G+R +G + +LAD GRL++ EGGY + Y+ C LEG+
Sbjct: 260 GIFDPMGRMLVSAAGFRALGARIAALADEVCEGRLVVCVEGGYSLLYAPLCALRVLEGI 318
>gi|260785050|ref|XP_002587576.1| hypothetical protein BRAFLDRAFT_95716 [Branchiostoma floridae]
gi|229272725|gb|EEN43587.1| hypothetical protein BRAFLDRAFT_95716 [Branchiostoma floridae]
Length = 1056
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 171/337 (50%), Gaps = 18/337 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI+ I+ L R + A +LL HT +++ + E + + +
Sbjct: 488 HPEQPYRIRRIMQALDRHRLQDRCVKLESRLATEEELLYLHTAEHLQLMQETAEMTPRQL 547
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ L ++ +A LA G +++A++ V G + A A+VRPPGHHA+ G
Sbjct: 548 NRTQADFNSIFLCNDTYKSACLAAGCSMNAVEAVATGSVRSAVAVVRPPGHHAEVDKPCG 607
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+C N+A LA + A G G+V+++D D+H+GNGT F VL IS+H ++G +
Sbjct: 608 FCIFNSAALAARFAQKRLGVGRVLILDWDIHHGNGTQHMFVDDPTVLYISIHRYDNGMFF 667
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P P + +G G G G+ +N+P G GD Y+ A ++V+P ++ P ++++
Sbjct: 668 PGSP-DADCTVVGSGPGEGFTVNVPWSRGGMGDPEYMAAFQQVVMPIAYEYSPELVIISA 726
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D++ DP G +T GY M ++ SLA GGR++++ EGGY+++ + +
Sbjct: 727 GFDAARGDPLGHCDVTPPGYAHMTHMLSSLA----GGRVVLLLEGGYNLSSISESMSECT 782
Query: 341 EGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
+ +L P P+ Y P E ++ ++ +Q
Sbjct: 783 KILLGDPCP----PLEYSPPCEEAVQSMLSTLHVHQK 815
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 131/260 (50%), Gaps = 12/260 (4%)
Query: 52 ENSDRIKNIVSILK-RGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV- 109
E R +++L+ RG + ++ S PA ++LS H+ + +L + +
Sbjct: 165 ERPARFTETLTLLRQRGLLDRCVTIPSR-PATREEVLSIHSEGLLGKLESSVTMTTDQLR 223
Query: 110 -----CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
+ ++P S A L+ G TL M VL G+ + A+VRPPGHHA + GY
Sbjct: 224 QLSETFEDIAIHPKSLECARLSAGCTLQLMDQVLTGNVRNGMAVVRPPGHHADRDQSCGY 283
Query: 165 CFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGP 222
C NN +A + AL +V+++D DVH+GNGT + FY +VL S+H H + P
Sbjct: 284 CLFNNIAIAARQALTKYSLERVLIVDWDVHFGNGTQDLFYDDPRVLFFSIHRYEHMEYWP 343
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
H + +G G G GYN+N+P G GD Y+ A ++++P +F+P ++++ G
Sbjct: 344 -HMERANYSFVGRGAGKGYNVNVPWNKIGLGDPDYMAAFQQVLMPMAYEFDPQLVLVSAG 402
Query: 282 QDSSAFDPNGRQCLTMDGYR 301
DS+ D G+ L Y
Sbjct: 403 FDSAVGDRMGKMVLMPMAYE 422
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVHAMTELVVPAIQKFEPN 274
++G + P P + +G G G G+ +N+P G GD Y+ A ++V+P ++ P
Sbjct: 853 DNGMFFPGSP-DADCTVVGSGPGEGFTVNVPWSRGGMGDPEYMAAFQQVVMPIAYEYSPE 911
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
++++ G D++ DP G +T GY M ++ SLA GGR++++ EGGY+++ +
Sbjct: 912 LVIISAGFDAARGDPLGHCDVTPPGYAHMTHMLSSLA----GGRVVLLLEGGYNLSSISE 967
Query: 335 CLHATLEGVLNLPLALLSDPIAYYPEDE 362
+ + +L P P+ Y P E
Sbjct: 968 SMAECTKILLGDPCP----PLEYSPPCE 991
>gi|332705054|ref|ZP_08425139.1| putative deacetylase [Moorea producens 3L]
gi|332356231|gb|EGJ35686.1| putative deacetylase [Moorea producens 3L]
Length = 305
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
V + D L HD G+ HPE +R+ IV+ +K P + I W
Sbjct: 4 VIYSDEFLEHDNGRF----------------HPERPERLTAIVNAIKAAPWADQIKWQLP 47
Query: 79 IPAQ----IPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
+ +P + H+ YI + + ++ G + T ++P S+ ALLAV L A+
Sbjct: 48 TAVETRRVMPLVQQIHSQRYIETVEKIARSNGGRLDADTGISPRSYDVALLAVSAWLDAV 107
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVH 193
VL + A+ L RPPGHHA+ G+C +NA +A AL S +V ++D DVH
Sbjct: 108 DQVLTTNNS-AFVLARPPGHHAERQRGMGFCLFSNAAIAAYYALEQSEVERVAILDWDVH 166
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYN-LNIPLPNGTG 252
+GNGT + R ++ ISLH + P +P G E +GF N LN+P+ G+
Sbjct: 167 HGNGTQDVVERDARIAYISLHQS-----PCYPGTGQASE----QGFHNNVLNLPMAPGST 217
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
Y + V+P + KF+P+++++ G D++A DP L D Y L
Sbjct: 218 LADYQPMFEQKVMPFLTKFQPDLLIVSAGYDANAADPLANIALQPDDYGLFTNYCLQLTR 277
Query: 313 RYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
R G EGGY +T A + AT+E L
Sbjct: 278 RIVFGL-----EGGYELTALAQSVLATIEACLT 305
>gi|190347501|gb|EDK39781.2| hypothetical protein PGUG_03879 [Meyerozyma guilliermondii ATCC
6260]
Length = 910
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 182/363 (50%), Gaps = 41/363 (11%)
Query: 42 GFLEVLEKHPENSDRIKNI------------VSILKRGPISPYISWHSGIPAQIPQLLSF 89
+ E ++ HPE+ RI I S+ + PY++ A ++L
Sbjct: 228 SYFEYIDPHPEDPRRIYRIYKKLAETGLIHDTSLSGSDHLGPYMTKIPVREATAEEILEV 287
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ ++++ + +K + D +N S+ +A L+ G + A K V++G K
Sbjct: 288 HSKEHLSYIQSTEKMSRDQLLEETEKGDSIYVNNDSYLSAKLSCGGAIEACKAVVEGTVK 347
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P G+C +N +A + L + ++V+ID D+H+GNGT +
Sbjct: 348 NSMAIVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKNYPESVRRIVIIDWDIHHGNGTQK 407
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
FY +VL ISLH +G + P + G +GEG G GY++NIP G GD YV+
Sbjct: 408 AFYNDPRVLYISLHRYENGRFYPG-TKYGHYSNVGEGPGEGYSVNIPWNCPGKGDGDYVY 466
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++++P I +F P+++++ G D++ D G +T GY M +++ +A G
Sbjct: 467 AFNKIILPVINEFNPDLLIVSSGFDAADGDIIGGCHVTPVGYGYMTHLLKGIAR----GN 522
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP----IAYYPEDEAFPV--KVIESI 372
L ++ EGGY+ L + G L + LL +P I+ P + +V++++
Sbjct: 523 LAVILEGGYN-------LDSITNGALAVTKVLLGEPPENTISALPSSDTIETVDEVMKAL 575
Query: 373 KQY 375
QY
Sbjct: 576 AQY 578
>gi|168059644|ref|XP_001781811.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162666718|gb|EDQ53365.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 535
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 163/319 (51%), Gaps = 14/319 (4%)
Query: 38 GFDPGFL---EVLEKHPENSDRIKNIVSILK-RGPISPYISWHSGIPAQIPQLLSFHTPD 93
G+D L E + HPE DR++ I+ L+ G +S A +L HT +
Sbjct: 128 GYDDRMLLHEETGKSHPERPDRLRAIMGGLQASGLLSGTCFTIPAREATQAELELVHTAN 187
Query: 94 YINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
+I + + T N S AA LA G ++ G +A VRPPG
Sbjct: 188 HIGAVQATEGQDLSYFTPDTYANEHSALAARLAAGICTDLASAIMTGKAHNGFAAVRPPG 247
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHA+ G+C NNA +A + A +G KV+++D DVH+GNGT E F + VL ISL
Sbjct: 248 HHAEQEQVMGFCLHNNACVAARAAQAAGAKKVLIVDWDVHHGNGTQEIFEQDPTVLYISL 307
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFE 272
H + G +P G ++G G G G+ +NIP G GD Y+ A +V+P ++FE
Sbjct: 308 HRHEA--GAFYPGTGWAHQVGSGPGEGFCVNIPWSCGGIGDGDYLSAFQHVVMPIARQFE 365
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---V 329
P+M ++ G D++ DP G +T +GY +M ++ SL SGGR+L+V EGGY+ +
Sbjct: 366 PDMTIISAGFDAARGDPLGGCDVTPEGYAQMTFLLSSL----SGGRILVVLEGGYNLRSI 421
Query: 330 TYSAYCLHATLEGVLNLPL 348
+ SA + L+G PL
Sbjct: 422 SASAAAVMKVLQGTNPGPL 440
>gi|164614597|gb|ABY64525.1| histone deacetylase 2 splice variant A [Tetrahymena thermophila]
Length = 664
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 147/279 (52%), Gaps = 22/279 (7%)
Query: 80 PAQIPQLLSFHTPDYINELVEA---DKAGGKMV-CDGTVLNPGSWGAALLAVGTTLSAMK 135
PA+ + H +YI E +E +K K + T N S AA L VG + ++
Sbjct: 72 PAEKSIVKYAHDDNYI-EFIEGMWPEKTKKKEIYMLDTYFNQSSKDAAYLGVGGVIESVD 130
Query: 136 HVLDGHGKIAYALVRPPGHHA-QPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVH 193
++ K A+ ++RPPGHH+ + + G+CF NN +A + L N G KV++ D D+H
Sbjct: 131 RIISKQWKNAFCIIRPPGHHSGESKVCTGFCFFNNVAIAAKYLQKNHGVKKVLIFDWDIH 190
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG--- 250
+G+GT F VL +S+H + G +PQ+G+V G GEG G+ +NIP G
Sbjct: 191 HGDGTQHIFQDDPNVLFVSMHRHDD--GSFYPQSGSVTNNGSGEGKGFKINIPWDIGYSQ 248
Query: 251 ----TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
G Y++A + P IQ+F+P I++ G DS+ DP G+ LT +GY +
Sbjct: 249 NALTAGTDEYIYAFERIAFPIIQEFQPEFILISAGFDSAEGDPLGQCKLTYEGY---AYL 305
Query: 307 VRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
R L D +G +L+V EGGY+ ++++A + TL G
Sbjct: 306 TRRLMDITNGKNILVVLEGGYNLESISWAAESVLRTLTG 344
>gi|443669257|ref|ZP_21134491.1| histone deacetylase domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159027296|emb|CAO86838.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330452|gb|ELS45166.1| histone deacetylase domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 305
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVEALKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPLEIRDEVIPLIKQVHNQDYVDRLRRICQQGGGRLDADTPVSTRSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL + L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLSTSDP-TFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPLP+
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLPS 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|241958122|ref|XP_002421780.1| histone deacetylase, putative [Candida dubliniensis CD36]
gi|223645125|emb|CAX39722.1| histone deacetylase, putative [Candida dubliniensis CD36]
Length = 869
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 166/327 (50%), Gaps = 31/327 (9%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E ++ HPE+ RI I L I P++ A ++L
Sbjct: 179 SYSEYIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGPFMLKIPIREATAEEILEV 238
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ D++ + + + D +N S+ +A L+ G T+ A K V++G K
Sbjct: 239 HSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVK 298
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P G+C +N +A + L + K+V++D D+H+GNGT +
Sbjct: 299 NSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKTYPESVRKIVIVDWDIHHGNGTQK 358
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
FY +VL ISLH +G + P + G +++GEG G G+ +NIP + G D YV+
Sbjct: 359 AFYNDPRVLYISLHRFENGRFYPGT-KYGDSNQVGEGPGEGFTINIPWRSYGMHDGDYVY 417
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A +++ P I +F+P++I++ G D++ D G +T GY M ++ +A G+
Sbjct: 418 AFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIA----RGK 473
Query: 319 LLIVQEGGYH---VTYSAYCLHATLEG 342
L ++ EGGY+ ++ SA + L G
Sbjct: 474 LAVILEGGYNLDSISKSALAVAKVLVG 500
>gi|345807128|ref|XP_855362.2| PREDICTED: histone deacetylase 6 [Canis lupus familiaris]
Length = 1143
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 177/356 (49%), Gaps = 17/356 (4%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 85 GTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQDGLLDRCVSFQARF-AEKEELML 143
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ +YI+ E + G + D L+P S+ A LA G+ L + VL
Sbjct: 144 VHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLRNEI 203
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A+VRPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 204 RNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQFT 263
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
F + VL S+H G + P H + +G G+G GY +N+P G D Y+ A
Sbjct: 264 FDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIAA 322
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
L++P +F+P ++++ G D+ DP G T G+ ++ ++ LA GG+L
Sbjct: 323 FLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLA----GGKL 378
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
++ EGGY++ A + A+L +L P +L P A P +A +E+++ +
Sbjct: 379 ILSLEGGYNLRALAEGVSASLHTLLGDPCPILESPSAPCPSAQASLFCALEALEPF 434
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 162/314 (51%), Gaps = 17/314 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE R+ I+ L+ ++ PA +LL+ H+ +Y+ L +K + +
Sbjct: 499 HPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHSAEYVGRLRATEKMKTREL 558
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + P ++ A LA G+ ++ VL A+VRPPGHHA+ A G
Sbjct: 559 HREGSNFDSIYICPSTFACAQLATGSVCRLVEAVLAREVLNGTAVVRPPGHHAERDAACG 618
Query: 164 YCFLNNAGLAVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A++ +++++D DVH+GNGT F VL ISLH +HG++
Sbjct: 619 FCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTF 678
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G+ G G+ +N+ NG GD Y+ A LV+P +F P ++++
Sbjct: 679 FPMGDE-GASSQVGQAAGTGFTVNVAW-NGPRVGDADYLAAWHRLVLPIAYEFNPELVLV 736
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ +GY + ++ LA+ GR++++ EGGY++T + + A
Sbjct: 737 SAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLAN----GRVVLILEGGYNLTSISESMAA 792
Query: 339 TLEGVLNLPLALLS 352
+L P LL+
Sbjct: 793 CTRSLLGDPPPLLT 806
>gi|425438250|ref|ZP_18818655.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676633|emb|CCH94391.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 305
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVETLKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPIEIRDEVIPLIKQVHNQDYVDRLRRICQRGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPL
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLSA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKDFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|167836254|ref|ZP_02463137.1| histone deacetylase family, putative [Burkholderia thailandensis
MSMB43]
gi|424903780|ref|ZP_18327293.1| histone deacetylase family, putative [Burkholderia thailandensis
MSMB43]
gi|390931653|gb|EIP89054.1| histone deacetylase family, putative [Burkholderia thailandensis
MSMB43]
Length = 369
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A LL H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAARLDMSSAPAATDDDLLRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERAANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LT+SLH + P
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQAIYYDDPNTLTLSLHQDRCF----PPGYS 213
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
DE G G G G N+N+PL G GD Y +A +V+PA+ F P+++V+ G D++A D
Sbjct: 214 GADERGAGAGAGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPDLVVVASGLDANAVD 273
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
P R L D YR M ++ A R+ GRL++V EGGY Y +C A +E +
Sbjct: 274 PLARMQLHSDSYRFMTHALKQAAQRHCAGRLVVVHEGGYSEAYVPFCGQAIVEAL 328
>gi|425442237|ref|ZP_18822492.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389716835|emb|CCH98977.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 305
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEQAARLTAIVEALKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPIEIRDEVIPLIKQVHNQDYVDRLRRICQQGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPL
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLSA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|291407454|ref|XP_002719913.1| PREDICTED: histone deacetylase 6-like [Oryctolagus cuniculus]
Length = 1245
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 178/358 (49%), Gaps = 31/358 (8%)
Query: 6 SEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILK 65
SE +PA G++ +DD + + L+D F G PE IK +++
Sbjct: 124 SEAKTPAGTGLV---FDDQL---NEFHCLWDDSFPEG--------PERLHAIKE--QLIQ 167
Query: 66 RGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGS 119
G + +S+H+ A+ +L+ H+ +YI+ E + K G V D L+P S
Sbjct: 168 EGLLDRCVSFHARF-AEKEELMLVHSLEYIDLMESTQYMKEGELRVLADTYDSVYLHPNS 226
Query: 120 WGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN 179
+ A LA G+ L + VL + A++RPPGHHAQ ++ DGYC N+ +A + A
Sbjct: 227 YSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ 286
Query: 180 S-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGE 237
G +V+++D D+H+G GT F + VL S+H G + P P + G G+
Sbjct: 287 KHGIQRVLIVDWDIHHGQGTQFMFDQDPSVLYFSIHRYEQGRFWPHLPASN-WSTTGFGQ 345
Query: 238 GFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLT 296
G GY +N+P G D Y+ A +++P +F+P ++++ G D+ DP G T
Sbjct: 346 GQGYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAAT 405
Query: 297 MDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
G+ ++ ++ LA GG+L++ EGGY++ A + A+L +L P +L P
Sbjct: 406 PAGFAQLTHLLMGLA----GGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESP 459
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 164/319 (51%), Gaps = 20/319 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L+ ++ PA +LL+ H+ +Y+ + K + +
Sbjct: 546 HPETPQRILRIMCHLEELGLAGRCLNLPARPATDAELLTCHSAEYVERIRATQKMKTREL 605
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + P ++ A LA GT ++ VL+G ALVRPPGHHA+ A G
Sbjct: 606 HREGANFDSIYICPSTFTCAQLATGTVCRLVEAVLEGEVLNGVALVRPPGHHAEQDAACG 665
Query: 164 YCFLNNAGLAVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A++ +V+++D D+H+GNGT F VL ISLH + G++
Sbjct: 666 FCFFNSVAVAARHAQAISGRALRVLIVDWDIHHGNGTQHIFEDDPSVLYISLHRYDQGTF 725
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G G G+ +N+ NG+ GD Y+ A LV+P +F P ++++
Sbjct: 726 FPVGDE-GACSQMGRAAGTGFTVNVAW-NGSRIGDADYLMAWHRLVLPIAYEFNPELVLV 783
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ +GY + ++ LA GGR++++ EGGY++T + + A
Sbjct: 784 SAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLA----GGRIILILEGGYNLTSISESMAA 839
Query: 339 TLEGVLNLP---LALLSDP 354
+L P LALL P
Sbjct: 840 CTRSLLGDPPPMLALLRPP 858
>gi|302383903|ref|YP_003819726.1| histone deacetylase superfamily protein [Brevundimonas
subvibrioides ATCC 15264]
gi|302194531|gb|ADL02103.1| histone deacetylase superfamily [Brevundimonas subvibrioides ATCC
15264]
Length = 306
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 138/279 (49%), Gaps = 12/279 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +R+ +++ L +S + + A + L H Y++ ++EA A G
Sbjct: 20 HPERPERLAAVLAALDDSDLS--LDRCAATEAAVTDLERIHPAAYVSRMIEASPAQGLAQ 77
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T+L+ GS AA LA G + A++ V +G A+A VRPPGHHA+P A G+C +
Sbjct: 78 LDADTILSSGSVRAARLAAGAVIDAVRAVAEGRTARAFAAVRPPGHHAEPDQAMGFCLFS 137
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
N +A ++A G +V V+D DVH+GNGT F + + S+H P +P G
Sbjct: 138 NVAVAARVAQTLGMARVAVVDFDVHHGNGTQAAFEADDSLFLASIHQM-----PLYPGTG 192
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
E G G +N+ + + + ++PA+ F P++I++ G D+ D
Sbjct: 193 APSE----TGVGNIVNVAVEPHAARESWRASFAGGLMPALDDFAPDLILISAGFDAHRRD 248
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
P Q L + + R V +A R GG+++ EGGY
Sbjct: 249 PLAHQSLEAEDFAWATRAVLEVARRRCGGKVVSSLEGGY 287
>gi|407926710|gb|EKG19671.1| Histone deacetylase superfamily [Macrophomina phaseolina MS6]
Length = 894
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 178/352 (50%), Gaps = 36/352 (10%)
Query: 50 HPENSDRIKNIVSILKRG----------PISPYISWH-SGIPAQIPQLLSFHTPDYINEL 98
HPE+ RI I + L P + W + PA ++ HT D+ +
Sbjct: 142 HPEDPRRIMEIFNELAESGLVETPSHHVPDPDFSLWRINARPATEEEICLVHTRDHYARV 201
Query: 99 VEADKAGGKMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPP 152
E +++ D L+P ++ A L+ G + A + V+ GH + A A++RPP
Sbjct: 202 REYQNFSQEILNEMASDMDSVYLHPATFSCASLSAGGAIEAARAVVAGHVRNAVAVIRPP 261
Query: 153 GHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
GHHA+ G+CF NN +A ++ C K++++D DVH+GNG FY VL
Sbjct: 262 GHHAEHDAPGGFCFFNNVSVAARVCQQDFPDKCRKILILDWDVHHGNGVQRAFYSDPNVL 321
Query: 210 TISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPA 267
IS+H++ +G++ PS+ G GEG G G N+NIP + G GD Y+ A ++V+P
Sbjct: 322 YISIHVHMNGTFYPSN-NYGDHTHCGEGPGEGKNVNIPWSSQGMGDGDYIFAFQQIVMPI 380
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
Q+F+P+++++ G D++A D G+ +T Y M ++ SLA G++++ EGGY
Sbjct: 381 AQEFDPDLVIVAAGFDAAAGDRLGKCFVTPPCYAHMTHMLMSLAK----GKVVVCLEGGY 436
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFP--VKVIESIKQYQN 377
+ L + + + + L+ +P E E P + +E +K+YQ+
Sbjct: 437 N-------LQSIAKSAVAVTRTLMGEPPDRLEELEPSPLGLSTVELVKRYQS 481
>gi|432110144|gb|ELK33921.1| Histone deacetylase 6 [Myotis davidii]
Length = 1150
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 169/336 (50%), Gaps = 17/336 (5%)
Query: 30 TGKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLL 87
+G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 84 SGTGLVFDEQLNDFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELM 142
Query: 88 SFHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
H+ +YI+ E + G V D L+P S+ A LA G+ L + +L
Sbjct: 143 LVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYNCACLASGSVLRLVDAILGAE 202
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHAQ ++ DGYC N+ +A + A G +V+++D DVH+G GT
Sbjct: 203 IRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHGIQRVLIVDWDVHHGQGTQF 262
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
F + VL S+H G + P H + G G+G GY +N+P G D Y+
Sbjct: 263 TFDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIA 321
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++++P +F+P ++++ G D+ DP G T G+ ++ ++ LA GGR
Sbjct: 322 AFLQILLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHMLMGLA----GGR 377
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
LL+ EGGY++ A + A+L +L P +L P
Sbjct: 378 LLLSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESP 413
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 163/315 (51%), Gaps = 17/315 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE R+ I+S L+ ++ PA +LL+ H+ +Y+ L +K +
Sbjct: 503 QHPEVPQRVSRIMSRLEELGLAGRCLMLPARPATDAELLTCHSAEYVARLRATEKMRTRE 562
Query: 109 V------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+ D + P ++ +A LA G T ++ VL G ALVRPPGHHA+ A
Sbjct: 563 LYRESASFDSIYICPSTFASAQLATGATCCLVEAVLAGEVLNGVALVRPPGHHAEQDAAC 622
Query: 163 GYCFLNNAGLAVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+CF N+ +A + A++ +++++D DVH+GNGT F VL ISLH ++G+
Sbjct: 623 GFCFFNSVAVAARHAQAISGHPLRILIVDWDVHHGNGTQHIFEDDPSVLYISLHRYDYGT 682
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIV 277
+ P + G ++G G G+ +N+ NG GD Y+ A LV+P +F P +++
Sbjct: 683 FFPMGDE-GAPSQVGRAAGTGFTVNVAW-NGPRMGDSEYLAAWHRLVLPIAYEFNPELVL 740
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G D++ DP G L+ +GY + ++ LA GR++++ EGGY++ + +
Sbjct: 741 VSAGFDAAWGDPLGGCHLSPEGYAHLTHLLMGLA----SGRIILILEGGYNLASISESMA 796
Query: 338 ATLEGVLNLPLALLS 352
A +L P LL+
Sbjct: 797 ACTRTLLGDPPPLLT 811
>gi|449442727|ref|XP_004139132.1| PREDICTED: histone deacetylase 15-like [Cucumis sativus]
Length = 600
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 38 GFDPGFL---EVLEK---HPENSDRIKNIVSILKRGPISPYISWHSGIPAQ---IPQLLS 88
GFD L EV K HPE DR++ I + L I P + IPA+ +L
Sbjct: 196 GFDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKCY--PIPAREITKEELEM 253
Query: 89 FHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYAL 148
H+ + I + T N S AA LA G ++ G K +AL
Sbjct: 254 VHSLENIQAVEVTSNVISCYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFAL 313
Query: 149 VRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKV 208
VRPPGHHA A G+C NNA ++ A +G KV+++D DVH+GNGT E F ++ V
Sbjct: 314 VRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSV 373
Query: 209 LTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPA 267
L ISLH + +G +P G DE+G GY +N+P +G GD Y+ A ++V+P
Sbjct: 374 LYISLHRHE--FGRFYPGTGAADEVGTMGAEGYCVNVPWSRSGVGDNDYIFAFKQVVLPI 431
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
F P++ ++ G D++ DP G +T GY +M ++ ++ SGG+LL++ EGGY
Sbjct: 432 ASAFAPDLTIISAGFDAARGDPLGMCDVTPTGYAQMTHLLNTV----SGGKLLVILEGGY 487
Query: 328 HV 329
++
Sbjct: 488 NL 489
>gi|390601936|gb|EIN11329.1| histone deacetylase clr3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 687
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 159/297 (53%), Gaps = 22/297 (7%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI---PQLLSFHTPDYINELVEADK 103
L+ HPE +RI +I +L + IP ++ + L H+ + ++++ +
Sbjct: 54 LDGHPEQPERIVSIYRLLAENGC---LEKMKHIPIRMVKKQEALLVHSEELWDKVLAISR 110
Query: 104 AGGKMVCD--------GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
+ + D +NP + AA L+ G + A V G + ++A+VRPPGHH
Sbjct: 111 LRAQDIEDTKRYYELMSLYVNPHTPSAARLSCGGVIEATLAVARGEVRKSFAIVRPPGHH 170
Query: 156 AQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A+P G+CF NN +AV++A + KV+++D D+H+GNGT + F VL ISLH
Sbjct: 171 AEPEEHMGFCFFNNVAVAVRVAQQLTKIRKVLILDWDIHHGNGTQKAFNDDPDVLYISLH 230
Query: 215 M-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFE 272
+ G + PS G ++ GEG G G+++NIP P G D Y+HA ++V+P +F
Sbjct: 231 RYDAGQFYPS-TTFGAMNSCGEGPGIGFSVNIPWPGPGMRDADYLHAFQKIVMPIAIEFA 289
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
P ++++ G D++ D G +T GY M ++ SLA GG+L++ EGGY++
Sbjct: 290 PELVIISAGFDAADGDELGECHVTPTGYAHMTHMLSSLA----GGKLVVALEGGYNL 342
>gi|239614851|gb|EEQ91838.1| histone deacetylase [Ajellomyces dermatitidis ER-3]
Length = 806
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 134/240 (55%), Gaps = 13/240 (5%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D N ++ +++L+ G + K V+ G K A A++RPPGHHA+ G+C NN
Sbjct: 241 DSIYFNSLTFTSSILSCGGAIETCKAVVSGQVKNAIAVIRPPGHHAEQNKTMGFCLFNNV 300
Query: 171 GLA---VQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ 226
+A Q C K++++D DVH+GNG + FY +L ISLH+ GS+ P +
Sbjct: 301 CVAARVCQREFGEKCRKILILDWDVHHGNGVQKAFYDDPNILYISLHVYRDGSFYPGG-E 359
Query: 227 NGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G D GEG G G N+NIP P G GD Y++A E+V+P +F+P+++++ G D++
Sbjct: 360 EGNWDHCGEGNGLGKNINIPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAA 419
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
A D G +T Y M R++ ++A GG++ + EGGY+ ++ SA + TL G
Sbjct: 420 AGDELGGCFVTPPCYAHMTRMLMNVA----GGKVAVCLEGGYNFRSISKSALAVTRTLMG 475
>gi|148222822|ref|NP_001080486.1| histone deacetylase 6 [Xenopus laevis]
gi|27882614|gb|AAH43813.1| Hdac6-prov protein [Xenopus laevis]
Length = 1286
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 182/356 (51%), Gaps = 38/356 (10%)
Query: 14 EGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYI 73
E + +D+ M+ H + ++D HPE+ RI I KR +
Sbjct: 479 EQRTALVYDEQMMEH---RNMWDC-----------YHPESPQRINQI---FKRHKDLGLL 521
Query: 74 SWHSGIPAQI---PQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
S +P+++ +L H+ YI ++ + + + + +N S+ +A
Sbjct: 522 ERCSRLPSRLATQKELQMCHSLSYIQKIEASAHMKPRDLHRLGDEYNSIYINSKSYHSAR 581
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA--LNSGC 182
LA G+T + ++ V+ G + +VRPPGHHA+P A G+CF N LA + A L S
Sbjct: 582 LAAGSTFNVVEAVVTGKAQNGIGIVRPPGHHAEPGEACGFCFFNTVALAARYAQRLQSQS 641
Query: 183 G---KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEG 238
+V+++D DVH+GNGT F VL +SLH + G + P+ ++ + D++G G+G
Sbjct: 642 EDPLRVMILDWDVHHGNGTQHIFQEDASVLYMSLHRYDEGLFFPNS-EDASHDKVGIGKG 700
Query: 239 FGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTM 297
GYN+NIP G GD Y+ A +V+P +F P ++++ G D++ DP G ++
Sbjct: 701 AGYNVNIPWNGGKMGDVEYLMAFHRVVMPIAYEFNPQLVLISAGFDAARGDPLGGCQVSP 760
Query: 298 DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSD 353
+GY M ++ SLA GGR+++V EGGY++T + + +L P +LSD
Sbjct: 761 EGYAHMTHLLMSLA----GGRVILVLEGGYNLTSISESMVMCTRSLLGDPPPVLSD 812
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 137/283 (48%), Gaps = 18/283 (6%)
Query: 85 QLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
++L H+P Y+ + K + D L+P S+ A LAVG+ L + V
Sbjct: 135 EILLIHSPQYVALMRSTQKMTMDELRALSDRYDSVYLHPTSFTCASLAVGSVLQLVDRVQ 194
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNG 197
G + A+VRPPGHHA +GYC N +A + A L G +V+++D DVH+G G
Sbjct: 195 HGEIRNGLAVVRPPGHHAHTDQMNGYCMFNQLAIAARYAQLTYGAKRVLIVDWDVHHGQG 254
Query: 198 TAEGFYRSNKVLTISLHM--NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GD 253
T F VL S+H N G W H + +G+ G +N+N+ N T D
Sbjct: 255 TQFIFESDPSVLYFSVHRYDNGGFW--PHLKESASSAVGKERGERFNVNVAW-NKTRMSD 311
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
Y+H +++P +F+P+++++ G DS DP G T + + ++ SLA
Sbjct: 312 ADYIHVFLNVLLPVAYEFQPHLVLVAAGFDSVVGDPKGEMSATPACFSHLTHLLMSLAQ- 370
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
GRL++ EGGY+ A A+L+ +L P L+ P A
Sbjct: 371 ---GRLILSLEGGYNQRSLAEGACASLKALLGDPCPRLTLPSA 410
>gi|310798036|gb|EFQ32929.1| histone deacetylase domain-containing protein [Glomerella
graminicola M1.001]
Length = 745
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 169/337 (50%), Gaps = 52/337 (15%)
Query: 50 HPENSDRIKNIVSILKR------GPISPYIS----------WHSGI-PAQIPQLLSFHTP 92
HPE+ RI+ I KR GP S W G A ++L+ HTP
Sbjct: 95 HPEDPRRIEEIYKAFKRAGLVYTGPESKVADVMRDTPTKYMWRIGTREATKEEILTTHTP 154
Query: 93 DYIN-----------ELVEADKA---GGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
+ N EL E + G + G++ ++ AALL+ G + KHV+
Sbjct: 155 LHYNWVEGLSKMDYAELRETSRQYDQGRASLYVGSL----TFTAALLSCGGAIDTCKHVV 210
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYG 195
+G+ K A+A++RPPGHHA+ G+CF NN +AV++ C KV+++D DVH+G
Sbjct: 211 EGNVKNAFAVIRPPGHHAEYDQPLGFCFFNNVPVAVKICQQEYPKDCRKVLILDWDVHHG 270
Query: 196 NGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQN-----GTVDELGEGEGFGYNLNIPLPN 249
NG FY VL ISLH+ +G + P P N G ++ G G G G N+NI +
Sbjct: 271 NGIQNIFYDDPNVLYISLHVYQNGIFYPGKPDNQEIPDGGIEHCGTGPGLGKNVNIGWHD 330
Query: 250 -GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
G GD Y+ A ++++P +F P+++V+ G D++A D G +T Y M ++
Sbjct: 331 QGMGDGEYMAAFQKIIMPIANEFSPDLVVISAGFDAAAGDELGGCFVTATCYAHMTHMLM 390
Query: 309 SLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
SLAD G++ + EGGY+ ++ SA + TL G
Sbjct: 391 SLAD----GKVAVCLEGGYNLQAISTSAVAVARTLMG 423
>gi|261190666|ref|XP_002621742.1| histone deacetylase [Ajellomyces dermatitidis SLH14081]
gi|239591165|gb|EEQ73746.1| histone deacetylase [Ajellomyces dermatitidis SLH14081]
Length = 800
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 134/240 (55%), Gaps = 13/240 (5%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D N ++ +++L+ G + K V+ G K A A++RPPGHHA+ G+C NN
Sbjct: 235 DSIYFNSLTFTSSILSCGGAIETCKAVVSGQVKNAIAVIRPPGHHAEQNKTMGFCLFNNV 294
Query: 171 GLA---VQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ 226
+A Q C K++++D DVH+GNG + FY +L ISLH+ GS+ P +
Sbjct: 295 CVAARVCQREFGEKCRKILILDWDVHHGNGVQKAFYDDPNILYISLHVYRDGSFYPGG-E 353
Query: 227 NGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G D GEG G G N+NIP P G GD Y++A E+V+P +F+P+++++ G D++
Sbjct: 354 EGNWDHCGEGNGLGKNINIPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAA 413
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
A D G +T Y M R++ ++A GG++ + EGGY+ ++ SA + TL G
Sbjct: 414 AGDELGGCFVTPPCYAHMTRMLMNVA----GGKVAVCLEGGYNFRSISKSALAVTRTLMG 469
>gi|170739305|ref|YP_001767960.1| histone deacetylase superfamily protein [Methylobacterium sp. 4-46]
gi|168193579|gb|ACA15526.1| histone deacetylase superfamily [Methylobacterium sp. 4-46]
Length = 326
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 15/316 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DRI+ + L++ + + S + A+ L+ H Y+ ++E + G ++
Sbjct: 20 HPERADRIRVVERTLEQERFAGLVREQSPLVART-ALIRAHDEAYVAAMIEGLRRGDCVL 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T +PG+ A L + G + A+ V+ G + A++ +RPPGHHA A G+CF N
Sbjct: 79 ADDDTPASPGTLEAVLRSAGAAVQAVDEVMTGQVRNAFSAMRPPGHHAGRARATGFCFFN 138
Query: 169 NAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A G ++ ++D D H+G+GT E F+ VL S H W P +P +
Sbjct: 139 NVAVAARHAQAVHGAARIAIVDWDAHHGDGTQEIFWSDASVLFCSTH----QW-PLYPGS 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G V E GE + +N+PLP G + ++ V+P I+ F P++I++ G D+
Sbjct: 194 GAVSERGEHDTI---VNVPLPPGADGTMFRESLDVAVLPRIRAFRPDLILISAGFDAHWR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP LT + + + +AD+ SG R++ + EGGY + A A + ++ P
Sbjct: 251 DPLSDLNLTEADFGWATQRLVDIADQVSGARMVSLLEGGYDLIGLARSAEAHVAALMAPP 310
Query: 348 LALLSDPIAYYPEDEA 363
S I Y+ + A
Sbjct: 311 ----SRSIGYWEDSRA 322
>gi|75674833|ref|YP_317254.1| histone deacetylase superfamily protein [Nitrobacter winogradskyi
Nb-255]
gi|74419703|gb|ABA03902.1| histone deacetylase superfamily [Nitrobacter winogradskyi Nb-255]
Length = 309
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DRI+ I +L ++ + + H YI EL G +
Sbjct: 20 HPERPDRIRAIDEVLTADHFKD-LARGEAPQGSLDSVALCHNEHYIAELRHLSPENGLIY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T ++PG+W AAL VG ++A + V+ GH A+ RPPGHHA+ A G+C +
Sbjct: 79 LDSDTSMSPGTWEAALRGVGGAIAATEAVIAGHASNAFVATRPPGHHAETGRAMGFCLFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
A +A + A G +V V+D DVH+GNGT + F+ V+ S H P P +
Sbjct: 139 QAAIAARHAQRKHGIDRVAVVDFDVHHGNGTQDIFWADRSVMYCSTHQM-----PLFPGS 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N P+ +G G + A L++P ++KF P + V+ G D+ +
Sbjct: 194 GASSERGDHDTI---VNAPMASGDGGARFRAAFENLILPRLRKFAPELFVISAGFDAHSR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + R V +AD +GGR++ V EGGY
Sbjct: 251 DPLATLNLAASDFEWVTRKVMDVADATAGGRIVSVLEGGY 290
>gi|425460812|ref|ZP_18840293.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389826457|emb|CCI23006.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 305
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVEALKQTKWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPIEIRDEVIPLIKQVHNQDYVDRLRRICQRGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPL
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLSA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|328544913|ref|YP_004305022.1| histone deacetylase family [Polymorphum gilvum SL003B-26A1]
gi|326414654|gb|ADZ71717.1| Histone deacetylase family, putative [Polymorphum gilvum
SL003B-26A1]
Length = 309
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 145/291 (49%), Gaps = 13/291 (4%)
Query: 41 PGFLEVLEK--HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
P FL+ L HPE DR++ I IL+ + + + + H Y++ L
Sbjct: 9 PCFLDHLTPIGHPERPDRLRAIDRILEHERFHS-LERENAPMGTVEAIARVHPMAYVDSL 67
Query: 99 VEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
+A G + D T ++PGSW AAL VG A+ V+ A++ RPPGHHA+
Sbjct: 68 YKAAPTEGLVRIDADTTMSPGSWEAALRGVGAACQAVDEVVAKKVSNAFSASRPPGHHAE 127
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+C NNA +A + A ++ G +V ++D DVH+GNGT + F+ V+ S H
Sbjct: 128 KARAMGFCLFNNAAIAARHAQSAHGLERVAIVDFDVHHGNGTQDIFWADPSVMYCSTHQM 187
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
P +P +G DE GE +N+PL G + A +++P + F P+++
Sbjct: 188 -----PLYPGSGAADETGEANTI---VNVPLAAGDDGAVFREAFQTVILPRLDAFAPDLV 239
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
V+ G D+ DP G L + + + +ADR+S GR++ + EGGY
Sbjct: 240 VISAGFDAHVRDPLGGLNLVEADFGWATKALMDVADRHSDGRVVSILEGGY 290
>gi|352106532|ref|ZP_08961475.1| histone deacetylase domain-containing protein 2 [Halomonas sp.
HAL1]
gi|350597575|gb|EHA13703.1| histone deacetylase domain-containing protein 2 [Halomonas sp.
HAL1]
Length = 340
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G+ + DG+ + +W +A + + ++ + +L G + AYAL RPPGHHA A G
Sbjct: 107 AGRYLADGSAPVGQHTWQSAYWSAQSAVAGAEALLAG-DRFAYALSRPPGHHAGIDSAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+CFLNNA +A Q L S ++VV+D D+H+G G E FY+ + VL IS+H + ++ P+
Sbjct: 166 FCFLNNAAIAAQ-HLTSRYPRIVVLDPDMHHGQGIQEIFYQRDDVLYISIHGDTTNFYPA 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G+G G GYNLN+P+P+G+ D E AI+ FEP+ IVL +G D
Sbjct: 225 --VTGFEDERGQGAGLGYNLNLPMPHGS-DEAVFFDRLEQACQAIRLFEPDAIVLALGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + ++ G+ E+GR V L L+VQEGGY++
Sbjct: 282 IYELDPQAKVAVSTAGFGELGRRVAGL-----NVPTLVVQEGGYYL 322
>gi|425468515|ref|ZP_18847528.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389884812|emb|CCI34911.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 305
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVEALKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPLEIRDEVIPLIKQVHNQDYVDRLRRICQQGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPL
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLSA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|407975810|ref|ZP_11156713.1| histone deacetylase superfamily protein [Nitratireductor indicus
C115]
gi|407428671|gb|EKF41352.1| histone deacetylase superfamily protein [Nitratireductor indicus
C115]
Length = 308
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 12/280 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL-VEADKAGGKM 108
HPE DR++ IV L P + Y+ +L H +++++ + + G
Sbjct: 20 HPERPDRLRAIVDRLDDEPFA-YLERLEAPLGDEATILYAHPQHHLDKVKMSIPEKGMAR 78
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
+ + T ++P S+ AALLA+G +A+ V G + RPPGHHA+ A G+C N
Sbjct: 79 IDEDTTVSPKSFEAALLAIGGANAAVDDVFSGEAGNVFVAGRPPGHHAEKDRAMGFCLFN 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA +A + A G +V ++D DVH+GNGT + F+ VL S H P +P
Sbjct: 139 NAAIAARHAQRKHGAERVAIVDWDVHHGNGTQDIFWDDPTVLYCSTHQM-----PLYPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G DE G G +N PLP G G + A+ LV+PA+ +F P++I++ G D+
Sbjct: 194 GARDET----GVGNIVNAPLPPGAGSEAFREALNALVLPALDRFSPDLIIISAGFDAHWR 249
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP + + ++ ADR S GRL+ + EGGY
Sbjct: 250 DPLAELNFQTEDFDWATGVLMEKADRLSQGRLVSLLEGGY 289
>gi|421482216|ref|ZP_15929798.1| histone deacetylase domain-containing protein 2 [Achromobacter
piechaudii HLE]
gi|400199551|gb|EJO32505.1| histone deacetylase domain-containing protein 2 [Achromobacter
piechaudii HLE]
Length = 339
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 133/227 (58%), Gaps = 15/227 (6%)
Query: 106 GKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
G+ + DG+ + P +W +A + ++ + VL G + AYA+ RPPGHHA+ A G+
Sbjct: 108 GRYLADGSCPVGPQTWQSAYWSAQCAVAGAEAVLAGD-RHAYAICRPPGHHARRDAAGGF 166
Query: 165 CFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
C+LNNA +A Q L S +V ++D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 167 CYLNNAAIAAQ-RLRSKYQRVAILDTDMHHGQGIQEIFYERSDVLYVSIHGDPENFYPV- 224
Query: 225 PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
G DE G GEG+GYN+N+P+P+G+ + + + + AI+ F+P+ +VL +G D
Sbjct: 225 -VAGFEDERGSGEGYGYNVNLPMPHGSPESVFFERLAQ-ARRAIELFQPDALVLSLGFDI 282
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
DP +T DG+ +GR V SL RL LIVQEGGY++
Sbjct: 283 FEKDPQAMVSVTEDGFERLGREVGSL-------RLPTLIVQEGGYYI 322
>gi|220921867|ref|YP_002497168.1| histone deacetylase superfamily protein [Methylobacterium nodulans
ORS 2060]
gi|219946473|gb|ACL56865.1| histone deacetylase superfamily [Methylobacterium nodulans ORS
2060]
Length = 309
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 13/298 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DRI+ I L+ S + A++ H Y+ + EA G +
Sbjct: 20 HPERPDRIRVIEQALEDERFSALVR-EQAPRAELAVATLAHPEAYVEAIAEAAPQAGLVA 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D TV++PG+ A L ++G A+ V+ G A+A +RPPGHHA+ A G+C N
Sbjct: 79 IDSDTVMSPGTLEAVLRSLGAARQAVDEVMAGKVANAFAAMRPPGHHAERRRAMGFCVFN 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
A +AV+ A S G +V ++D DVH+GNG+ + F+ VL S H P +P
Sbjct: 139 QAAVAVRHAQKSFGAERVALVDWDVHHGNGSQDIFWSDRSVLYCSTHQM-----PLYPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G+ + +N+PL P GDR + A + ++P + F P++IV+ G D+
Sbjct: 194 GAASERGDHDTI---VNVPLRPGDDGDR-FREAFEQGILPRVDAFHPDLIVISAGFDAHW 249
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
DP LT + R + ++ADR +GGR++ V EGGY + + + A +E ++
Sbjct: 250 RDPLANLQLTEADFAWATRRLMAIADRRAGGRVVSVLEGGYDLDGLSKSVAAHVEALM 307
>gi|268551831|ref|XP_002633897.1| Hypothetical protein CBG19959 [Caenorhabditis briggsae]
Length = 935
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 13/307 (4%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDY 94
F+ D V HPE+ DRI+ I LK+ + + L
Sbjct: 7 FNESQDEHKNTVCPTHPESPDRIQKIKEALKQTKVLEKCHVLTSFLEIDDADLELTHEKE 66
Query: 95 INELVEADKAGGKMV---C---DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYAL 148
+ ELV ++K + + C D + S A V ++ +A+
Sbjct: 67 VKELVASEKKTQEEINSQCENYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASNGFAV 126
Query: 149 VRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKV 208
+RPPGHHA G+C NN A + A SG +++++D+DVH+G GT FY +V
Sbjct: 127 IRPPGHHADSASPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGQGTQRIFYEDKRV 186
Query: 209 LTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVP 266
S+H + HG + P P++ D +G G G GYN N+PL G D Y+ + +++P
Sbjct: 187 FYFSIHRHEHGLFWPHLPESD-FDHIGAGLGVGYNANVPLNETGCTDSDYLSILFHVLMP 245
Query: 267 AIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGG 326
+F+P+ +++ G DS DP G LT DGY ++SLA GR+L+V EGG
Sbjct: 246 LATQFDPHFVIISAGFDSLRGDPIGGMQLTPDGYSHFLYHLKSLAQ----GRMLVVLEGG 301
Query: 327 YHVTYSA 333
Y+ SA
Sbjct: 302 YNHQMSA 308
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 170/368 (46%), Gaps = 22/368 (5%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPD 93
F+ G + F + HPE R + I+ L+ G + I ++ A ++ HT
Sbjct: 418 FNEGDEAHFDLEEDNHPEKPARTRRILKTLQESGVLDKCIERNTERIATDDEIRMVHTKK 477
Query: 94 YINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KI 144
++ L + + + + + L S A AVG L ++ + +
Sbjct: 478 MLDHLKQTETMKDEELMEEAENEFNSIYLTRDSLKVARKAVGACLQSIDEIYKKPAGQRN 537
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFY 203
A +VRPPGHHA + + G+C NN +A + A K V+++D DVH+GNGT E FY
Sbjct: 538 ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRHHRAKRVLILDWDVHHGNGTQEIFY 597
Query: 204 RSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG-TGDRGYVHAMT 261
V+ +S+H + G++ P D +GE G G ++N+P GD Y A
Sbjct: 598 EDPSVMYMSIHRHDKGNFYPIGEPKDYFD-VGESAGEGTSVNVPFSGAPMGDLEYQMAFQ 656
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
+++P +F P+++++ G D++ DP G +T + + M + SLA GR++
Sbjct: 657 RVIMPIAYQFNPDLVIISAGFDAAIDDPLGEYKVTPETFAWMTYQLSSLA----AGRIIT 712
Query: 322 VQEGGYHVTYSAYCLHATLEGVLNLP-LALLSDPIAYY--PED-EAFPVKVIESIKQYQN 377
V EGGY++T + A E + N L L + + P D ++ +K + + Q
Sbjct: 713 VLEGGYNLTSISNSALAVCEVLQNRAMLRRLKNEKEQFGKPHDIQSSCIKTLREVCAVQQ 772
Query: 378 DVIPFLKG 385
+ LKG
Sbjct: 773 NHWSILKG 780
>gi|325182696|emb|CCA17150.1| histone deacetylase putative [Albugo laibachii Nc14]
Length = 416
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 145/298 (48%), Gaps = 31/298 (10%)
Query: 51 PENSDRIKNIVSILKR-GPISPYISW-HSGIPAQIPQLLSFHTPDYINEL------VEAD 102
P+ S+R + + +IL+R G P + S IPA Q+ FHT YIN L + A
Sbjct: 108 PQRSERPERVTTILRRLGKCFPSVQIVDSVIPASRAQVERFHTKMYINMLYQFHRKINAS 167
Query: 103 KAGGKMVCD--------GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI--AYALVRPP 152
+ + D TV+ G+ A L A G A+ V++ + A+ +VRPP
Sbjct: 168 RQAIPVNTDFRYVTMDEDTVMMDGTMDACLAAAGAVCQAVDSVMNPLSSVRNAFCVVRPP 227
Query: 153 GHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTI 211
GHHA+ A G+CFLNN G+ AL+ +V++ID DVH+GNG + L I
Sbjct: 228 GHHAEANAAMGFCFLNNVGIGAFHALDKYQLQRVLIIDFDVHHGNGIENRMKVEKRTLYI 287
Query: 212 SLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKF 271
S+H + P P GT + +N+ LP T Y + + VVP IQ F
Sbjct: 288 SIHQH-----PLFPFTGT-------QSTPQCVNVTLPKNTNSYQYRKRILQSVVPQIQSF 335
Query: 272 EPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
EP++I+L G D+ DP + CL Y + LA +Y GR++ V EGGYH+
Sbjct: 336 EPDLILLASGFDAHKNDPLAQICLQSQDYYWLTNQFTELAWQYCHGRIVSVLEGGYHL 393
>gi|259417020|ref|ZP_05740940.1| histone deacetylase superfamily protein [Silicibacter sp.
TrichCH4B]
gi|259348459|gb|EEW60236.1| histone deacetylase superfamily protein [Silicibacter sp.
TrichCH4B]
Length = 342
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 10/213 (4%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+N +WG+A + T +SA + V G + AYAL RPPGHHA MA G+CFLNN+G+A
Sbjct: 119 INAETWGSAYWSAQTAISAAELVAGGE-RAAYALCRPPGHHAFGDMAGGFCFLNNSGIAA 177
Query: 175 QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELG 234
QL + G + ++D+DVH+GNGT FY + VLT+S+H + + P G E G
Sbjct: 178 QLLRDRGL-RPAILDVDVHHGNGTQGLFYDRDDVLTLSIHADPADFYPFF--WGHSSERG 234
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
EG G GYNLN+PLP GT D ++ A+ + + + F +++V+ +G D+S DP
Sbjct: 235 EGRGRGYNLNLPLPRGTDDAPFLAAL-QTCLERVHAFGADVLVIALGLDASKDDPFQGFQ 293
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+T DG+ +G + +G L VQEGGY
Sbjct: 294 VTGDGFSRVGEAIAR-----AGLPTLFVQEGGY 321
>gi|430742652|ref|YP_007201781.1| deacetylase [Singulisphaera acidiphila DSM 18658]
gi|430014372|gb|AGA26086.1| deacetylase, histone deacetylase/acetoin utilization protein
[Singulisphaera acidiphila DSM 18658]
Length = 332
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 160/329 (48%), Gaps = 22/329 (6%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
++ +F D ML+H G HPE +R+K I+ L+R +
Sbjct: 17 MVTLFTDPRMLDHIPPAG----------------HPERPERLKAILRHLERTGLLASCPK 60
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
A +LL HTP Y+ L + + GG + + T L+ GS AA LA G + A+
Sbjct: 61 GMIREATHEELLRVHTPGYLQHLADFEAGGGGSIEEDTWLSSGSGLAARLAAGAAVEAVS 120
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHY 194
V++G K A LVRPPGHHA+P G+C N +A A++ G +V+++D DVH+
Sbjct: 121 AVVEGPSKRALCLVRPPGHHARPGEPMGFCLYGNIAVAAADAIHRLGMNRVLIVDFDVHH 180
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGT E FY V +S+H P +P G DE G G G G NIPLP
Sbjct: 181 GNGTQEIFYDDPAVAFLSIHRF-----PFYPGTGAADETGTGRGLGLTRNIPLPAHVSRA 235
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y A + + P ++++ G D+ DP G L + + + R + ++A+ +
Sbjct: 236 DYHAAFRAELESLADRIRPELVLISAGFDAHEEDPVGGLGLLEEDFEVLTRDLINVAETH 295
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
+ GR++ V EGGY+++ A C+ L +
Sbjct: 296 AEGRIVSVLEGGYNISRLAGCVEVHLRSL 324
>gi|356513908|ref|XP_003525650.1| PREDICTED: histone deacetylase 15-like [Glycine max]
Length = 508
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 18/302 (5%)
Query: 38 GFDPGFL---EVLEK---HPENSDRIKNIVSILKRGPISPYISWHSGIPAQI---PQLLS 88
GFD L EV +K HPE DR++ I + L R I P + IPA+ +L++
Sbjct: 108 GFDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPGKCY--SIPAREITPEELIT 165
Query: 89 FHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYAL 148
H+ ++I + ++ T N S AA LA G ++ G K +AL
Sbjct: 166 VHSLEHIESVEVTSESLSSYFTSDTYANEHSALAARLAAGLCADLASAIVSGRAKNGFAL 225
Query: 149 VRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKV 208
VRPPGHHA A G+C NNA +A A +G KV+++D DVH+GNGT E F ++ V
Sbjct: 226 VRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSV 285
Query: 209 LTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPA 267
L ISLH + G G +P G +E+G G+ +NIP G GD Y+ A +V+P
Sbjct: 286 LYISLHRHEG--GKFYPGTGAAEEVGSMGAEGFCVNIPWSQGGVGDNDYIFAFQHVVLPI 343
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+F P++ ++ G D++ DP G +T GY M ++ +L SGG+LL++ EGGY
Sbjct: 344 AAEFNPDLTIVSAGFDAARGDPLGCCDITPSGYAHMTNMLNAL----SGGKLLVILEGGY 399
Query: 328 HV 329
++
Sbjct: 400 NL 401
>gi|340718184|ref|XP_003397551.1| PREDICTED: histone deacetylase 6-like [Bombus terrestris]
Length = 1160
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 172/346 (49%), Gaps = 28/346 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +DD ML H +F+ + HPE RI I + +
Sbjct: 534 VCIVYDDRMLKH---CDMFN-----------DNHPEKPHRINIIYKKYQEYNLLDRCYVQ 579
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTT 130
G A +L+ H+ +YI+ + + + K + + L+P +W +A ++ G+
Sbjct: 580 QGRSATREELILVHSKEYIDSIKDTENLKPKELKKQAETYNSVYLHPETWTSACISTGSL 639
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVID 189
L + VL+G + A+VRPPGHHA +A G+C NN +A + A+ +V+++D
Sbjct: 640 LQVVDSVLNGESQSGIAIVRPPGHHAGENIACGFCIFNNIAIAAKYAVEFHHVKRVLIVD 699
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL- 247
DVH+GNGT F KVL IS+H ++G++ P+ + +G G G+ +NIP
Sbjct: 700 WDVHHGNGTQSIFEEDPKVLYISVHRYDNGNFFPN-SKRANYSYVGSLSGEGFTVNIPWN 758
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
G GD Y+ A ++++P +F P ++++ G D+ DP G +T + Y + +
Sbjct: 759 KKGMGDAEYIAAFQQIIMPIAYQFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWL 818
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSD 353
SLA+ GR+++ EGGY++ A+ + + +L PL +L +
Sbjct: 819 SSLAN----GRIILSLEGGYNINSIAHAMAICTKSLLGDPLPILEN 860
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 15/247 (6%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D ++P ++ +LLAVG+T++ ++ + + A++RPPGHHA + GYCF NN
Sbjct: 193 DAIYIHPSTYQLSLLAVGSTINLVESICKEEIQNGMAIIRPPGHHAMKSEYCGYCFFNNV 252
Query: 171 GLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + L+S K++++D D+H+G T + FY +V+ S+H +G + P+ +
Sbjct: 253 AIAAEKVLSSNLASKILIVDWDIHHGQATQQMFYNDPRVIYFSIHRYENGEFWPN-LRES 311
Query: 229 TVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+G+G G GYN N+PL G + Y+ ++++P +F+P++I++ G D++
Sbjct: 312 NFHFVGDGLGEGYNFNVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALG 371
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
P G LT Y + + SLA G++ ++ EGG YCL + E
Sbjct: 372 CPEGEMLLTPACYAHLLSSLLSLA----AGKVAVILEGG-------YCLKSLAESAALTL 420
Query: 348 LALLSDP 354
LL DP
Sbjct: 421 RTLLGDP 427
>gi|448342699|ref|ZP_21531645.1| histone deacetylase superfamily protein [Natrinema gari JCM 14663]
gi|445625094|gb|ELY78464.1| histone deacetylase superfamily protein [Natrinema gari JCM 14663]
Length = 343
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 151/311 (48%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I LK+ Y+ P + ++ + H DY+ +
Sbjct: 13 DPG-----SRHPESPDRLRAIRERLKKKHGVEYVE---ADPCDLDRMATVHERDYLESVR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E GG T +W A + G A + L+G +++ RPPGHHA
Sbjct: 65 EFCADGGGSWDPDTTAVEETWAAIRRSAGLACWAAEAALEGATGRDTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSGC---GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF++N +A Q AL+ +V +ID DVH+GNGT + FY + V +SLH
Sbjct: 125 SDNAMGFCFVDNVAVAAQHALDHDAYDVDRVAIIDWDVHHGNGTQDIFYDRDDVFFVSLH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G +DE G G G +NIP+P GT DR Y+ A+ + A+ F+P+
Sbjct: 185 EQ-----GLYPGTGDIDETGTRAGEGTTMNIPMPAGTDDRDYLAALEGPITAALTDFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y + VRSLA ++ EGGY +
Sbjct: 240 LLLISAGFDAHRHDPISRIRLSTEAYALLSDRVRSLAADTDAALAFVL-EGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVALVHETFDG 309
>gi|302680236|ref|XP_003029800.1| hypothetical protein SCHCODRAFT_78264 [Schizophyllum commune H4-8]
gi|300103490|gb|EFI94897.1| hypothetical protein SCHCODRAFT_78264 [Schizophyllum commune H4-8]
Length = 673
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 163/330 (49%), Gaps = 40/330 (12%)
Query: 27 NHDTGKGLFDTGFDPGFL---EVL-----EKHPENSDRIKNIVSILKR-GPISPYISWHS 77
NH+ ++T G++ E+L E H E RI I L+R G I I
Sbjct: 16 NHEKRPQSYETSRAVGYVFSPEMLGHSKPEGHEEQPARITRIFEALQRSGCIEAMIRLKI 75
Query: 78 GIPAQIPQLLSFHTPDYINELVE---------ADKAG-----GKMVCDGTVLNPGSWGAA 123
PA +++ H+ D+ N+++ AD A VC T L AA
Sbjct: 76 R-PALKEEVILVHSEDHWNKVMAFQYMTDQQIADSANFYEHLSLYVCQSTTL------AA 128
Query: 124 LLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGC 182
++ G + A V G ++A+VRPPGHHA+P G+CFLNN +A ++ +
Sbjct: 129 RMSCGGVIEACLAVARGEVAKSFAIVRPPGHHAEPEEHSGFCFLNNVAVAARVVQQATNI 188
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP--QNGTVDELGEGEGFG 240
K++++D D+H+GNGT F VL ISLH G G +P G + GEG G G
Sbjct: 189 KKIMILDWDIHHGNGTHRAFIDDPSVLYISLHRYDG--GVFYPGGTLGGMSSCGEGAGLG 246
Query: 241 YNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
Y++NIP P G D Y+HA +V+P +F P ++++ G D++ D G ++ G
Sbjct: 247 YSVNIPWPQAGMTDADYIHAFQRIVMPIAMEFAPELVIISAGFDAADGDTLGECHVSPAG 306
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
Y M ++ SLA GG+L++ EGGY++
Sbjct: 307 YSHMTHMLASLA----GGKLVVALEGGYNL 332
>gi|386284480|ref|ZP_10061702.1| acetoin utilization protein [Sulfurovum sp. AR]
gi|385344765|gb|EIF51479.1| acetoin utilization protein [Sulfurovum sp. AR]
Length = 307
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 153/324 (47%), Gaps = 28/324 (8%)
Query: 22 DDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPA 81
DD L HDTG HPE+ +R++ I ++ + P + + S I A
Sbjct: 8 DDIYLQHDTGA----------------MHPESPERLRAINKAIE--VLHPSLIFTSPISA 49
Query: 82 QIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
+ H+P++I + G + D TV + S+ AA +AVG + A+ +
Sbjct: 50 SERIIELVHSPEHIETIKNVCAYDGSIDSD-TVCSVDSFDAARMAVGAGVVALDGIKSEE 108
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEG 201
+ + VRPPGHHA+P A G+C NN +A + A + G KV+++D DVH+GNGT +
Sbjct: 109 FERVFCAVRPPGHHARPAQAMGFCLFNNIAIAARYAQSIGYKKVMIVDFDVHHGNGTQDT 168
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY + V S H + P G V E GEG+G GY N P+ GT D +
Sbjct: 169 FYADDSVFYFSSHQAY-----IFPGTGAVSEKGEGKGIGYTANFPVMAGTTDSELLDIYE 223
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
+ ++ F P++I++ G D DP + +T +G R++ R + AD +
Sbjct: 224 NDLPSLVKDFNPDIILVSAGYDLHESDPLAQLNITTEGIRDIVRCILDSADV----PFVF 279
Query: 322 VQEGGYHVTYSAYCLHATLEGVLN 345
EGGY+V TLE +L
Sbjct: 280 FLEGGYNVNALGENAKVTLEEMLK 303
>gi|354544791|emb|CCE41516.1| hypothetical protein CPAR2_800680 [Candida parapsilosis]
Length = 846
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 162/312 (51%), Gaps = 28/312 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E + HPE+ RI I L + PY+ A ++L
Sbjct: 169 SYFEYTDPHPEDPRRIYRIYKKLVEAGLVQDYSLSGIDELGPYMEKIPIREASADEILEV 228
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ + + + D +N S+ +A L+ G + A K V++G K
Sbjct: 229 HSEEHLKHIQSTETMTKDELLKETATGDSIYVNNDSFFSAKLSCGGAIEACKAVVEGKVK 288
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A VRPPGHHA+P G+C +N +A + L S K+VV+D D+H+GNGT +
Sbjct: 289 NSLAAVRPPGHHAEPDSPGGFCLFSNVAVAAKNILKSYPESVRKIVVLDWDIHHGNGTQK 348
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVH 258
FY +VL ISLH +G + P + G +++GEG G G+NLNIP +G D YV+
Sbjct: 349 AFYDDPRVLYISLHRYENGKFYPG-TKYGGAEQVGEGAGEGFNLNIPWRSHGMHDGDYVY 407
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++++P + +++P++I++ G D++ D G ++ GY M +++++A G+
Sbjct: 408 AFNKVIIPVMLEYDPDLIIVSSGFDAADGDVIGACHVSPAGYGYMTHLLKAIA----RGK 463
Query: 319 LLIVQEGGYHVT 330
L ++ EGGY++T
Sbjct: 464 LAVILEGGYNLT 475
>gi|37520844|ref|NP_924221.1| histone deacetylase family protein [Gloeobacter violaceus PCC 7421]
gi|35211839|dbj|BAC89216.1| histone deacetylase family protein [Gloeobacter violaceus PCC 7421]
Length = 307
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 159/332 (47%), Gaps = 31/332 (9%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
++ V + D L H TG HPE R+ IV L+R P++P ++W
Sbjct: 1 MLPVIYTDRFLEHRTGA----------------MHPERPQRLAAIVERLRRSPLAPSLAW 44
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMK 135
A QLL H+ + + + + +AGG + T ++ S+ A LA G L +
Sbjct: 45 QEPRQATREQLLWVHSAELVETVEQVCRAGGGSLDPDTTVSAESFEVASLAAGGWLDGVD 104
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHY 194
V+ G+ A+ L RPPGHHA+ A G+C NA LA AL G +V V+D DVH+
Sbjct: 105 AVIRT-GEPAWVLARPPGHHAERGQAMGFCVFANAALAAHYALRVHGRTRVAVLDWDVHH 163
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGT + + +++ ISLH + P +P G E G + LN+PLP G +
Sbjct: 164 GNGTQQLLWEESRLAYISLHQS-----PHYPGTGHSHERGAADNV---LNVPLPAGCARK 215
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y A+ LV P I++F+P ++++ G D DP L Y + R ++LA
Sbjct: 216 EYQQALDTLVWPFIERFDPELLIVSAGFDGHIDDPLAEMALRASDYGDFAR--QALA--- 270
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
R+L EGGY + A + A E L++
Sbjct: 271 RTRRVLFGLEGGYDLDGLAESVFAVTEACLSV 302
>gi|407768926|ref|ZP_11116303.1| histone deacetylase superfamily protein [Thalassospira xiamenensis
M-5 = DSM 17429]
gi|407287846|gb|EKF13325.1| histone deacetylase superfamily protein [Thalassospira xiamenensis
M-5 = DSM 17429]
Length = 347
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 133/229 (58%), Gaps = 13/229 (5%)
Query: 101 ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
A KAG M ++ +W +A + T ++A + V DG+ + AYAL RPPGHHA +
Sbjct: 105 AGKAGFHMGDTSCPISATTWQSAYASAQTAIAATRQVRDGNARSAYALCRPPGHHASRDI 164
Query: 161 ADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSW 220
A G+C+LNN+ +A Q L +V ++D+D+H+GNGT FY + V+T+S+H + +
Sbjct: 165 AGGFCYLNNSAVAAQ-ELRVKYDRVAILDVDLHHGNGTQHIFYARDDVMTLSIHADPRDF 223
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P G +E G+G G G+N N PLP G+GD ++ A+ +V I F + +V+ +
Sbjct: 224 YPFF--WGHAEERGQGAGLGFNHNYPLPLGSGDDAFLAALDRALV-MIDHFSADAVVIAL 280
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGY 327
G D+S+ DP G +T G+ ++G + SL +L ++VQEGGY
Sbjct: 281 GLDASSDDPFGGLAVTPGGFAKIGEKIGSL-------KLPTVLVQEGGY 322
>gi|425900605|ref|ZP_18877196.1| acetylpolyamine aminohydrolase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397890441|gb|EJL06923.1| acetylpolyamine aminohydrolase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 341
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 128/226 (56%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGELTWRSAYWSAQSAIAGARALLDGE-PAAYALCRPPGHHARAEAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNNA +A Q+ L +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYLNNAAIAAQV-LREKFARVAVLDTDMHHGQGIQEIFYERDDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G GYNLN+P+ +G + ++ A E + A++ F+ ++VL +G D
Sbjct: 225 --VAGFADERGSGAGQGYNLNLPMAHGASEADFL-AQLETALAAVKSFDAQVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T G+ +G +RSL G LIVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTRAGFARLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|409080659|gb|EKM81019.1| hypothetical protein AGABI1DRAFT_127061 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 547
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 149/291 (51%), Gaps = 16/291 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I +L + W P + L HT D+ +++ + +
Sbjct: 53 HPEQPQRIVRIWKMLSDYHYIKRMLWLPIRPVTREEALLVHTEDHWDKVQAIQYMTDQQI 112
Query: 110 CDGTV--------LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
D + G+ AALL+ G + A V G K A+VRPPGHHA+P
Sbjct: 113 VDSEAYYEQLSLYVMAGTTRAALLSCGGVIEAALAVAQGRLKKTLAIVRPPGHHAEPDEH 172
Query: 162 DGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+CF NN +A ++ + K++++D DVH+GNGT F VL +SLH G+
Sbjct: 173 MGFCFFNNIAVAARVVQQLTPIKKILILDWDVHHGNGTQRAFNDDPSVLYMSLHRYEQGN 232
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P+ P G++ GE G GY++N+P P G GD Y++A ++++P +F P+++++
Sbjct: 233 FYPTGP-FGSMQSCGEEAGLGYSVNVPWPCAGVGDADYIYAFQKVILPIGLEFAPDLVMI 291
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
G D++A D G +T GY M ++ LA+ GR+++ EGGY++
Sbjct: 292 SAGFDAAAGDELGECLVTPAGYAHMTHMLAGLAN----GRMVVALEGGYNL 338
>gi|406706811|ref|YP_006757164.1| histone deacetylase family protein [alpha proteobacterium HIMB5]
gi|406652587|gb|AFS47987.1| histone deacetylase family protein [alpha proteobacterium HIMB5]
Length = 309
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 151/307 (49%), Gaps = 28/307 (9%)
Query: 23 DGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQ 82
D NH+TG G HPE DR+ ++ K+ I W
Sbjct: 9 DTYQNHNTGSG----------------HPEKVDRVSVVIDNFKKLKNKNLI-WEKPKKFD 51
Query: 83 IPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
+ L + HT +YI+ + + + G DG T+++PGS A AVG+ ++A+ V++
Sbjct: 52 LNLLKTTHTSNYIDFVSNSFPSNGLEFLDGDTIVSPGSKDATTDAVGSIITAIDGVIEKK 111
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGL-AVQLALNSGCGKVVVIDIDVHYGNGTAE 200
K A+ VRPPGHHA+ A G+C NN + A L K+ +ID DVH+GNGT +
Sbjct: 112 YKNAFCAVRPPGHHAEKDKAMGFCIYNNVAVGATYLIEKFKYKKLAIIDFDVHHGNGTQD 171
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
FY + KVL IS H P +P +G+ +E G+ N+PL GT Y++A
Sbjct: 172 IFYDNEKVLYISTHQ-----FPYYPGSGSDNEKGKHNNV---FNLPLEAGTTSEQYLNAY 223
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
E V+ +++F+P I+ G D+ DP + L + + + + LA Y G+++
Sbjct: 224 -EYVLKKLKEFKPEFILFSAGFDAHKNDPLAQLKLETEDFYIITQRTLQLAKEYCNGKVV 282
Query: 321 IVQEGGY 327
+ EGGY
Sbjct: 283 SILEGGY 289
>gi|389739149|gb|EIM80343.1| histone deacetylase complex protein [Stereum hirsutum FP-91666 SS1]
Length = 674
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 135/239 (56%), Gaps = 11/239 (4%)
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D ++P + +A L+ G + A V G +A+VRPPGHHA+P G+CF NN
Sbjct: 134 ADSLYVHPMTPLSARLSCGGVIEATLAVARGELLKTFAIVRPPGHHAEPNRPMGFCFFNN 193
Query: 170 AGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH-GSWGPSHPQN 227
+A+++ N + KV+++D DVH+GNGT + F VL ISLH G + PS P
Sbjct: 194 VSVAIKVMQNLTPIKKVLILDWDVHHGNGTQKAFNEDPNVLYISLHRYEGGRFYPSGP-F 252
Query: 228 GTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G++ GEG G G+++NIP P GTGD Y+HA +V+P +F P M+++ G D++
Sbjct: 253 GSMVSSGEGPGLGFSVNIPWPEKGTGDADYIHAFQRIVMPIAIEFSPEMVIISAGFDAAE 312
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV---TYSAYCLHATLEG 342
D G +T GY M ++ LA GGR+++ EGGY++ + SA + TL G
Sbjct: 313 GDHLGECKVTPAGYAHMTHMLSGLA----GGRVVVALEGGYNLEATSTSALSVGRTLLG 367
>gi|154245103|ref|YP_001416061.1| histone deacetylase superfamily protein [Xanthobacter autotrophicus
Py2]
gi|154159188|gb|ABS66404.1| histone deacetylase superfamily [Xanthobacter autotrophicus Py2]
Length = 323
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 143/280 (51%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ + I ++ + I + + A+ ++ H D+++ + EA G +
Sbjct: 34 HPERPDRLRALDRIFEQEKFTHLIRDLAPLGAR-EDIIRVHPGDFVDAMGEASPKDGLVR 92
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D TVL+PGSW AAL AVG A+ VL+G + A+ +RPPGHH + G+C LN
Sbjct: 93 IDSDTVLSPGSWEAALRAVGGACYAVDEVLEGKVQNAFVAMRPPGHHCETRKPMGFCLLN 152
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
+A + A G G+V ++D DVH+GNGT + F+ + VL S H P +P
Sbjct: 153 QVAIAARHAQAKFGLGRVAIVDFDVHHGNGTQDIFWADDSVLYCSTHEM-----PLYPGT 207
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G V E G+ +N PL +G + AM ++P I F P++I++ G D+
Sbjct: 208 GAVSETGDANTI---VNAPLRSGDDGAVFKEAMETRILPRISAFSPDLILISAGFDAHIR 264
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + R + +AD GR++ V EGGY
Sbjct: 265 DPLASLRLVDTDFGWVTRRLMEVADATCQGRVVSVLEGGY 304
>gi|110633089|ref|YP_673297.1| histone deacetylase superfamily protein [Chelativorans sp. BNC1]
gi|110284073|gb|ABG62132.1| histone deacetylase superfamily [Chelativorans sp. BNC1]
Length = 308
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 144/291 (49%), Gaps = 14/291 (4%)
Query: 41 PGFLEVL--EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
P FLE L HPE DR++ I +L +P + + LL+ H YI +
Sbjct: 9 PIFLEHLVPPGHPERPDRLRAIEKVLAHDVFNPLDRVSAPMADSSAALLA-HMDAYIRRM 67
Query: 99 VEADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
A G + D TV++P SW AAL AVG L+A+ V G A+ RPPGHHA+
Sbjct: 68 EREIPAEGMVRIDVDTVVSPISWDAALTAVGGALAAVDDVFTGRADNAFVAARPPGHHAE 127
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+C NNA +A + A + G +V ++D DVH+GNGT + F+ VL S H
Sbjct: 128 RNRAMGFCLFNNAAIAARHAQKAHGAERVAIVDWDVHHGNGTQDIFWDDPSVLYCSTHQM 187
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
P +P GT E G G +N+PL G + A+ +++P I +F+P++I
Sbjct: 188 -----PLYPGTGTESETGAGN----IVNVPLAPGADGGDFREALEAVILPRINEFQPDLI 238
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
++ G D+ DP + + ++ A R+S RL+ + EGGY
Sbjct: 239 IISAGFDAHYRDPLAQLNFDERDFGWATAMLMERAGRWSSNRLVSLLEGGY 289
>gi|218440466|ref|YP_002378795.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7424]
gi|218173194|gb|ACK71927.1| histone deacetylase superfamily [Cyanothece sp. PCC 7424]
Length = 306
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 157/331 (47%), Gaps = 35/331 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+ ++ + + L HDTG HPE R+ IV LK S ++ W
Sbjct: 1 MFSIIYSEEFLKHDTGL----------------YHPETPGRLSAIVEALKATSWSDHLQW 44
Query: 76 HSGIPAQIPQLLS----FHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
PA S FH +YI+ L + GG M+ T ++P S+ ALLAV L
Sbjct: 45 FLPTPAWEKNAFSWVSKFHHREYIHYLKNLAEQGGGMLDPDTPVSPQSYDIALLAVSAWL 104
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDI 190
+ HVL+ + A+ALVRPPGHHA M G+C +NA +A AL G +V ++D
Sbjct: 105 DGIDHVLERNNP-AFALVRPPGHHATKKMGMGFCLFSNAAIAAHYALEKPGINRVAILDW 163
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT + + ++ S+H P +P G + G E LNIPLP G
Sbjct: 164 DVHHGNGTEDIVQGNPHIVYCSVHQ-----FPCYPGTGRASDRGHYENV---LNIPLPPG 215
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
+ + Y ++P ++KF+P+++++ G D++ DP L Y R + +
Sbjct: 216 STLKEYQVMFEGKIIPFLKKFQPDLLLVSAGYDANHDDPLAMMSLQPSDYGIFSRYLLGV 275
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
R+L EGGY++ + + AT+E
Sbjct: 276 TR-----RILFGLEGGYNLEVMSQSVVATVE 301
>gi|392865409|gb|EAS31193.2| histone deacetylase clr3 [Coccidioides immitis RS]
Length = 760
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 132/240 (55%), Gaps = 13/240 (5%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D N ++ +A+LA G + K V+ G K A A++RPPGHHA+ A G+C NN
Sbjct: 218 DSIYFNTLTFTSAILACGGAIETCKAVVSGKVKNAIAVIRPPGHHAEQCQAMGFCLFNNV 277
Query: 171 GLA---VQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ 226
+A Q C K++++D DVH+GNG FY VL ISLH+ G++ P Q
Sbjct: 278 SVAARVCQKTFKDKCRKIMIVDWDVHHGNGVQNAFYDDPNVLYISLHVYKDGAFYPGGEQ 337
Query: 227 NGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G D GEG G G N+NIP P G GD Y++A E+++P +F P+++++ G D++
Sbjct: 338 -GNWDHCGEGNGLGKNVNIPWPTQGMGDGDYLYAFQEVIMPIGYEFNPDLVIISAGFDAA 396
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
A D G +T Y M ++ +LA+ G++ + EGGY+ ++ SA + TL G
Sbjct: 397 AGDELGGCFVTPPCYAHMTSMLMNLAN----GKVAVCLEGGYNFRSISKSALAVTRTLMG 452
>gi|332795744|ref|YP_004457244.1| histone deacetylase superfamily protein [Acidianus hospitalis W1]
gi|332693479|gb|AEE92946.1| histone deacetylase superfamily [Acidianus hospitalis W1]
Length = 352
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 13/287 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HP S R +++ I + P L H +YI E V+ GK
Sbjct: 24 HPFKSLRESMAKKLMEERGFFHEIDLENAEPVTESLLEKIHDKEYI-EFVKKKSLEGKGY 82
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCF 166
D T G + AA+L VG ++ A++ + G+ A+ G HHA+ + A G+C
Sbjct: 83 LDDGDTPAFKGIYEAAILRVGGSVKALEMIEKGYD---VAINLGGGFHHAKKSSASGFCV 139
Query: 167 LNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N+ L +LA K+ ++DID H+G+GT + Y N+VL SLHM H ++ P
Sbjct: 140 FNDVALIAKLAEKKY--KIAIVDIDGHHGDGTQQLLYDDNRVLKASLHMFHRNF---FPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G DE+GEG+G G+ +N+PLP GT D Y+ A E+VV ++KF+P +I++V G DS
Sbjct: 195 TGNYDEIGEGKGKGFTINVPLPPGTADDAYISAFKEVVVKKLEKFKPELIIIVEGGDSHF 254
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
DP L+ GY E+ + S+A R+S +++++ GGY+ +A
Sbjct: 255 DDPLVELKLSTKGYSEVINEILSIARRFS-SKIILLGGGGYNYEATA 300
>gi|425452530|ref|ZP_18832347.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765617|emb|CCI08524.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 305
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + + L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSEEFLDHDTGI----------------YHPEKAARLTAIVEALKQTKWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPLEIRDEVIPLIKQVHNQDYVDRLRRICQRGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPL
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLSA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + V +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKDFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYVLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|389845973|ref|YP_006348212.1| histone deacetylase [Haloferax mediterranei ATCC 33500]
gi|448616412|ref|ZP_21665122.1| histone deacetylase [Haloferax mediterranei ATCC 33500]
gi|388243279|gb|AFK18225.1| histone deacetylase [Haloferax mediterranei ATCC 33500]
gi|445751067|gb|EMA02504.1| histone deacetylase [Haloferax mediterranei ATCC 33500]
Length = 337
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 159/332 (47%), Gaps = 31/332 (9%)
Query: 21 WDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIP 80
+++ L HDTG +HPE +DR++ I L + YI P
Sbjct: 5 YNETCLEHDTGA----------------RHPETADRLRAIRRGLAKRHGVEYIE---AAP 45
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
A + + H Y++E + + GG TV SW AAL + G A + L G
Sbjct: 46 ADKSTVAAVHEDAYVDEFHDFCQRGGGNWDPDTVAVEESWVAALASAGLAEWAARSALAG 105
Query: 141 HG--KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCG-KVVVIDIDVHYGNG 197
+++ RPPGHHA A G+CF NNA +A Q ++ G +V + D DVH+GNG
Sbjct: 106 DDGRDTPFSIGRPPGHHAVEDDAMGFCFFNNAAVAAQAVIDDGLAERVAIFDWDVHHGNG 165
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T + FY + V S+H +P G ++E GE G LNIPL G GD YV
Sbjct: 166 TQDIFYDRDDVFYASIHEE-----GLYPGTGEIEETGEDGAEGSTLNIPLRAGAGDADYV 220
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
++ E + PA+++F+P++ ++ G D+ DP R ++ +GY + + V+ L D
Sbjct: 221 YSFEEAIAPAVEQFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAMLTKRVQELCDDIDTA 280
Query: 318 RLLIVQEGGY---HVTYSAYCLHATLEGVLNL 346
+ V EGGY ++ +H T +G L +
Sbjct: 281 -IAFVLEGGYGLDTLSEGVAIVHETFDGRLAM 311
>gi|420247448|ref|ZP_14750853.1| deacetylase, histone deacetylase/acetoin utilization protein
[Burkholderia sp. BT03]
gi|398071344|gb|EJL62605.1| deacetylase, histone deacetylase/acetoin utilization protein
[Burkholderia sp. BT03]
Length = 311
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 12/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ +R+K ++ L R P + W + Q+ H+ D+I+E+V+ G M
Sbjct: 21 HPESPERLKTVLQTL-RSPEFAALEWRDAPMGTLEQVQLIHSQDFIDEVVDIAPKHGYMP 79
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG TV++PGSW A + VG + + VL+ + + RP GHHA+P A G+C
Sbjct: 80 LDGGDTVMSPGSWEAVMRCVGAACAGVDAVLNKDARNVFCATRPCGHHAEPGKAMGFCIF 139
Query: 168 NNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N A +A A + +V V+D DVH+GNGT FY ++ S H + P +P
Sbjct: 140 NQAAIAAAYAYDVHKLERVAVVDFDVHHGNGTQAAFYDRPELFYASSHQS-----PLYPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G LN+PLP G + + ++PA+++F P +I++ G D+
Sbjct: 195 TGKSAETGVSHNI---LNVPLPPGCDSDLFRSRIEADMLPAVREFRPELIIISAGFDAHR 251
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L D + + R + +AD GR++ + EGGY
Sbjct: 252 LDPLAALRLDDDDFHWITRELVRIADETCEGRVVSILEGGY 292
>gi|347963990|ref|XP_003437019.1| AGAP000532-PB [Anopheles gambiae str. PEST]
gi|333466941|gb|EGK96427.1| AGAP000532-PB [Anopheles gambiae str. PEST]
Length = 1118
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 179/379 (47%), Gaps = 42/379 (11%)
Query: 14 EGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYI 73
G + +D+ H + L+DT + PE +R ++ G +
Sbjct: 104 RGPTGILYDERFALH---RCLWDTNY-----------PECPERYLRVMERFTIGQLVDRC 149
Query: 74 SWHSGIPAQIPQLLSFHTPDYINELVEA----DKAGGKMVC---DGTVLNPGSWGAALLA 126
+ + PA +LL+ HT + I L + D+ + + D ++P S+ ++LA
Sbjct: 150 QFVAPRPATRAELLTKHTAEQIELLAQTHGSQDEPELERLSSHYDAIFIHPTSYETSVLA 209
Query: 127 VGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKV 185
VG+T+ ++ V G + A++RPPGHHA +GYCF NN +A Q AL+ G K+
Sbjct: 210 VGSTIQLVESVWSGTVQNGMAILRPPGHHAMTAEYNGYCFFNNVAIAAQHALDHLGTQKI 269
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D DVH+G GT FY +VL S+H HG++ P+ + D +G G+G GYN N
Sbjct: 270 LIVDWDVHHGQGTQRMFYSDPRVLYFSIHRYEHGTFWPN-LRESDFDYVGTGKGEGYNFN 328
Query: 245 IPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
+PL G + Y+ +L++P +F P +I++ G DS+ D G C+ +
Sbjct: 329 VPLNKTGMTNGDYLAIWQQLLLPVATEFAPELIIVSAGYDSALGDEKG--CMETPAF--Y 384
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI-----AYY 358
++ L + GR+ +V EGG YCL + EG LL DP A
Sbjct: 385 SHLLSPLL-LMAQGRVAVVLEGG-------YCLESLAEGCALTLKTLLGDPAPRLAEALQ 436
Query: 359 PEDEAFPVKVIESIKQYQN 377
P E+ ++ I ++
Sbjct: 437 PPSESMQASILNCIYSHRK 455
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 161/310 (51%), Gaps = 13/310 (4%)
Query: 50 HPENSDRIKNIVSILKRG-PISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG-K 107
HPE +RI I+ L ++ + G A +L H P+++ + E ++ K
Sbjct: 555 HPEQPERIAKIMQRLTGDYQLAQRMKRLPGRLATTEELCLVHGPEHVRLIGEVCQSSTMK 614
Query: 108 MVCD---GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
D +P + +A +A G+ L+ ++ VL+G + +VRPPGHHA+ G+
Sbjct: 615 QTADQYNSIYFHPSTDASARMATGSVLTVVEDVLEGRTRSGVCVVRPPGHHAEADTPHGF 674
Query: 165 CFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGP 222
C N+ +A + A+ G +V+++D DVH+GNGT F + VL +S+H ++G++ P
Sbjct: 675 CIYNSIAVAARHAVKRYGLRRVLIVDWDVHHGNGTQHIFEQDPHVLYVSVHRYDNGAFFP 734
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
+ +G G G G+N+NIP G GD YV A +++P ++EP ++++ G
Sbjct: 735 -RSTDADYTVVGSGPGRGFNVNIPWNRKGMGDPEYVAAFHSVILPIAYEYEPELVLVSAG 793
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
D++ DP G +T + Y + + LA GGRL++ EGGY+V ++ + +
Sbjct: 794 FDAAIGDPLGGCRVTPEAYGHFTQWLSVLA----GGRLVLCLEGGYNVNSISHAMAMCAK 849
Query: 342 GVLNLPLALL 351
+L PL +L
Sbjct: 850 ALLGDPLPML 859
>gi|374573344|ref|ZP_09646440.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. WSM471]
gi|374421665|gb|EHR01198.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. WSM471]
Length = 341
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 160/312 (51%), Gaps = 37/312 (11%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI--PQLLSFHT-------- 91
G ++ + PE +DR+ + K + P ++ G A+I P+ LSF +
Sbjct: 21 GVVKRTTEQPERADRLLKGLKDGKHHLVEP-TTFGQGPRARIHSPEYLSFLSEAWDAWTA 79
Query: 92 -----PDYINELVEADKAG-------GKM---VCDGTV-LNPGSWGAALLAVGTTLSAMK 135
P+ I + AG GK+ D + PG+W AA A ++A +
Sbjct: 80 LGDSGPEMIGNIHPVRHAGTYPTHIIGKLGWHTADTAAPIGPGTWAAACAATDVAVTAAQ 139
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYG 195
V+DG YAL RPPGHHA MA G+CFLNN+ +A L +VV++D+DVH+G
Sbjct: 140 MVMDGE-DATYALCRPPGHHAYRDMAGGFCFLNNSAIAAA-HLRQRHERVVILDVDVHHG 197
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGT FY V T+S+H + ++ P G E GEG G G NLNIPL GTGD G
Sbjct: 198 NGTQGIFYARPDVYTVSIHADPVAYYPY--VWGYAHERGEGPGLGTNLNIPLAIGTGDDG 255
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
Y+HAM ++ AI+ F P +V+ +G D+S DP +T G+R +G+ + +
Sbjct: 256 YIHAM-DVARKAIESFAPGALVIALGLDASEHDPLKGLAVTTPGFRRIGQAIAKM----- 309
Query: 316 GGRLLIVQEGGY 327
G + VQEGGY
Sbjct: 310 GLPTVFVQEGGY 321
>gi|408483118|ref|ZP_11189337.1| acetylpolyamine aminohydrolase [Pseudomonas sp. R81]
Length = 342
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++A K +L+G AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPIGELTWRSAYWSAQSAVAAAKDILEG-APAAYALCRPPGHHARYDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q AL G +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYINNAAVAAQ-ALRQGFQRVAVLDTDMHHGQGIQEIFYDRDDVLYVSIHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G V+E G G G+NLN+P+P+G + + + EL + A++ F ++VL +G D
Sbjct: 225 --VAGFVEERGNAAGQGFNLNLPMPHGASEAVFFEKL-ELALAAVKNFSAEVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +R L G +IVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTREGFARLGECIRGL-----GLPCVIVQEGGYHL 322
>gi|159483631|ref|XP_001699864.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158281806|gb|EDP07560.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 384
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 169/324 (52%), Gaps = 13/324 (4%)
Query: 38 GFDPGFLEVLE--KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI 95
GF F E LE +H EN++ + +++ + + A +L H P YI
Sbjct: 23 GFIQNFRENLEPWRHWENAETKRRFHGLVQVSGLFDQLQHLKPRHATEEELARVHDPAYI 82
Query: 96 NELVE--ADKAGGKMVC-DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPP 152
+ + E AD++ G D PG + A LA G + A + VL G + AYALVRPP
Sbjct: 83 SRVKEMSADESKGHHTAGDVATFAPGGYEIASLAAGGAIVATEAVLRGELRNAYALVRPP 142
Query: 153 GHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTI 211
GHHA+ G+C NN +A AL + G +V ++D DVH+GNGT F +VL I
Sbjct: 143 GHHAERDHGMGFCIFNNVAVAAAHALAAHGLKRVAIVDFDVHHGNGTQHIFESDPRVLFI 202
Query: 212 SLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQK 270
S+H + ++P ++G V E G GEG G +N+PLP G+G Y A +V+PA++
Sbjct: 203 SVHQD-----SNYPLRSGYVTETGTGEGEGATINVPLPPGSGSGAYKAAFERVVLPALEA 257
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
+ P ++++ G D+S D L+ + M +++ A+R GGRL+ + EGGY
Sbjct: 258 YRPELLLVSAGYDASYMDMLAAMILSSADFGWMMAQLKAAAERLCGGRLVALHEGGYSEL 317
Query: 331 YSAYCLHATLEGVLNLPLALLSDP 354
Y +C A L+ + + A ++DP
Sbjct: 318 YVPFCGLAALQSLSGVATA-VADP 340
>gi|303319433|ref|XP_003069716.1| histone deacetylase clr3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109402|gb|EER27571.1| histone deacetylase clr3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040837|gb|EFW22770.1| histone deacetylase 6 [Coccidioides posadasii str. Silveira]
Length = 760
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 132/240 (55%), Gaps = 13/240 (5%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D N ++ +A+LA G + K V+ G K A A++RPPGHHA+ A G+C NN
Sbjct: 218 DSIYFNTLTFTSAILACGGAIETCKAVVSGKVKNAIAVIRPPGHHAEQCQAMGFCLFNNV 277
Query: 171 GLA---VQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ 226
+A Q C K++++D DVH+GNG FY VL ISLH+ G++ P Q
Sbjct: 278 SVAARVCQKTFKDKCRKIMIVDWDVHHGNGVQNAFYDDPNVLYISLHVYKDGAFYPGGEQ 337
Query: 227 NGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G D GEG G G N+NIP P G GD Y++A E+++P +F P+++++ G D++
Sbjct: 338 -GNWDHCGEGNGLGKNVNIPWPTQGMGDGDYLYAFQEVIMPIGYEFNPDLVIISAGFDAA 396
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
A D G +T Y M ++ +LA+ G++ + EGGY+ ++ SA + TL G
Sbjct: 397 AGDELGGCFVTPPCYAHMTSMLMNLAN----GKVAVCLEGGYNFRSISKSALAVTRTLMG 452
>gi|262277958|ref|ZP_06055751.1| histone deacetylase 14 [alpha proteobacterium HIMB114]
gi|262225061|gb|EEY75520.1| histone deacetylase 14 [alpha proteobacterium HIMB114]
Length = 307
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 29/303 (9%)
Query: 27 NHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQL 86
NHDTG G HPE DR+K + LK+ + I W +
Sbjct: 13 NHDTGPG----------------HPERVDRVKVVNEELKK--LEKQIRWFEPKLFDHTII 54
Query: 87 LSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
H +Y+ ++ + G DG T+++PGS AAL AVG+ + + V++ K
Sbjct: 55 EKVHKKNYLEKISISFPKNGIQFLDGDTIVSPGSKEAALDAVGSIILGIDQVVNKEFKNT 114
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYR 204
+ VRPPGHHA+ A G+C NN + L+ KV +ID DVH+GNGT E FY
Sbjct: 115 FCSVRPPGHHAESDKAMGFCIYNNVAVGAAYLLHYYQYKKVAIIDYDVHHGNGTQEIFYN 174
Query: 205 SNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
++ VL IS H P +P G+V+E G LNIPL GT Y ++ E V
Sbjct: 175 NSNVLYISTHQ-----YPFYPGTGSVNEKGASNNI---LNIPLDPGTSSDIYFNSF-ENV 225
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
+ ++ F P I+L G D+ DP + L + E+ + + ++AD GR++ + E
Sbjct: 226 LKKLKSFNPEFILLSSGFDAHQKDPLAQVNLKSKDFYEITKRIMNVADNICDGRIVSILE 285
Query: 325 GGY 327
GGY
Sbjct: 286 GGY 288
>gi|350595673|ref|XP_003360363.2| PREDICTED: histone deacetylase 6-like [Sus scrofa]
Length = 1117
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 169/335 (50%), Gaps = 16/335 (4%)
Query: 51 PENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKAGGK 107
PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E + G
Sbjct: 106 PEGPERLHAIKEQLMQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGEL 164
Query: 108 MVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
V D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++ DG
Sbjct: 165 RVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDG 224
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
YC N+ LA + A +V+++D DVH+G GT F + VL S+H G +
Sbjct: 225 YCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFW 284
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P H + G G+G GY +N+P G D Y+ A L++P +F+P ++++
Sbjct: 285 P-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAA 343
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D+ DP G T G+ ++ ++ LA GG+L++ EGGY++ A + A+L
Sbjct: 344 GFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGKLILSLEGGYNLRSLAEGVSASL 399
Query: 341 EGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
+L P LL P A P +A +E+++ +
Sbjct: 400 HTLLGDPCPLLEFPGAPCPSAQASLSCALEALEPF 434
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 171/345 (49%), Gaps = 31/345 (8%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D M++H L+D+ HPE RI I+ L+ ++
Sbjct: 474 PVLQARTGLVYDQQMMDH---YNLWDS-----------HHPEMPQRILRIMRRLEELGLA 519
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y++ + +K + + D + PG++ A
Sbjct: 520 GRCLALPARPATDAELLACHSAEYVSRIRATEKMRTRELHREGANYDSIYICPGTFACAQ 579
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ--LALNSGC 182
LA G ++ VL G A+VRPPGHHA+ A G+CF N+ +A + A++
Sbjct: 580 LAAGAACRLVEAVLAGEVLNGIAVVRPPGHHAERDSACGFCFFNSVAVAARHAQAISGHA 639
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL ISLH +HG++ P + G ++G+ G G+
Sbjct: 640 LRILIVDWDVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDE-GASSQIGQAAGTGF 698
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+ NG GD Y+ A LV+P +F P ++++ G D++ DP G ++ +
Sbjct: 699 TVNVAW-NGPRVGDPEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEC 757
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
Y + ++ LA+ GR++++ EGGY++ + + A +L
Sbjct: 758 YAHLTHLLMGLAN----GRIILILEGGYNLISISESMAACTRSLL 798
>gi|312795465|ref|YP_004028387.1| acetylspermidine deacetylase [Burkholderia rhizoxinica HKI 454]
gi|312167240|emb|CBW74243.1| Acetylspermidine deacetylase (EC 3.5.1.48) [Burkholderia
rhizoxinica HKI 454]
Length = 369
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 155/329 (47%), Gaps = 17/329 (5%)
Query: 24 GMLNHDTGKGLFDTGF----DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
G ++ T + TGF + E+ + HPE R+ I L I P I
Sbjct: 52 GRVHDPTDRIAMATGFFTHPECRLHEMGQGHPECPARLSAIEDQLIANGIDPLIQHELAP 111
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVL 138
A L HT +I+ + + G D T +NP SW AAL + G +++A V+
Sbjct: 112 LADEASLARVHTRAHIDFVRDTAPEQGYAEIDADTQMNPHSWRAALRSAGASVAATDAVM 171
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNG 197
G A+ VRPPGHHA+P A G+CF NN +A + AL+ G +V +ID DVH+GNG
Sbjct: 172 AGRYDNAFCSVRPPGHHAEPARAMGFCFFNNVAIAARHALDVHGLARVAIIDFDVHHGNG 231
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T F +VL S + P +P +G ++ +N+PLP T
Sbjct: 232 TEAVFAGDERVLMCSFFQH-----PFYPFSGFDNQAPN------MVNLPLPARTRGMEVR 280
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
A+ + +P + F P MI + G D+ D G L D Y + R VR +A RY+ G
Sbjct: 281 EAIDLIWLPRLDAFRPQMIFVSAGFDAHREDELGNMGLVEDDYAWITRQVRDVAVRYAHG 340
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
R++ EGGY ++ + A L+ + NL
Sbjct: 341 RIVSCLEGGYSLSALGRSVVAHLKALANL 369
>gi|182677935|ref|YP_001832081.1| histone deacetylase superfamily protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182633818|gb|ACB94592.1| histone deacetylase superfamily [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 348
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 151/307 (49%), Gaps = 25/307 (8%)
Query: 25 MLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI-PAQI 83
L+H + G DTG PG HPE +DRI+ I +L+ + H + P
Sbjct: 44 FLSHPSSAG-HDTG--PG-------HPERADRIRVIDQMLEH---ERFQMLHRALAPGND 90
Query: 84 PQ-LLSFHTPDYINELVEA-DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
Q +L H Y++ + +A K G V T+L+PGSW A A+G T +A+ V+ G
Sbjct: 91 RQAILRVHPETYVDAIHDACPKEGYVEVGPDTILSPGSWEAIAHAIGGTTAAVNEVMRGD 150
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAE 200
K A+ RPPGHHA+ + G+CF N +A + A G +V ++D DVH+GNGT +
Sbjct: 151 AKNAFLAARPPGHHAEREVPMGFCFFNTPAIAARHAQAVHGAERVAIVDFDVHHGNGTQD 210
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
F+ VL S H P P G+V E GE +N PL G + AM
Sbjct: 211 IFWSDASVLYASTHEM-----PLFPGTGSVAETGEHNNI---VNAPLKAGDDGVAFREAM 262
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
++PA+ F P+ IV+ G D+ DP G L + + LA+R++ GR++
Sbjct: 263 ESRILPAVDAFHPDFIVISSGFDAHRLDPMGHLNLVEADFMWATAKIMELAERHAKGRVV 322
Query: 321 IVQEGGY 327
+ EGGY
Sbjct: 323 SILEGGY 329
>gi|374368343|ref|ZP_09626394.1| putative acetylpolyamine aminohydrolase [Cupriavidus basilensis
OR16]
gi|373100116|gb|EHP41186.1| putative acetylpolyamine aminohydrolase [Cupriavidus basilensis
OR16]
Length = 357
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 133/232 (57%), Gaps = 11/232 (4%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGK--IAYALVRPPGHHAQPTMADGYCFLNNAGL 172
L P SW + L + + ++A ++V + + IAY+L RP GHHA A G+C++NN+ +
Sbjct: 131 LGPQSWRSILRSAHSAVAAAQYVCEQQDRQGIAYSLSRPSGHHAHSDRAVGFCYVNNSAI 190
Query: 173 AVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDE 232
A + L GKV V+D+D H+G+GT + FY+ + V+TISLH + ++ P + G E
Sbjct: 191 AAETLLKR-FGKVAVLDVDAHHGDGTQQIFYQRSDVMTISLHADPSAYYPFY--TGYAFE 247
Query: 233 LGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGR 292
G G G+GYNLN PL +GT D G++ A+ + A++ + P +VL +G D+ DP
Sbjct: 248 RGYGAGYGYNLNFPLAHGTEDAGFLGALDN-ALDALRDYRPQALVLALGFDTYIHDPISV 306
Query: 293 QCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
+ +D YR +G + +L G ++VQEGGY V L L G++
Sbjct: 307 LRVGLDAYRGIGERINAL-----GVPTVVVQEGGYEVEAIGPALDCFLSGLV 353
>gi|345564453|gb|EGX47416.1| hypothetical protein AOL_s00083g509 [Arthrobotrys oligospora ATCC
24927]
Length = 770
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 137/250 (54%), Gaps = 15/250 (6%)
Query: 85 QLLSFHTPD---YINELVEADKAGG---KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
+ L HT D ++ L + DKA + D N S+ A L+ G ++ K V
Sbjct: 179 EALLVHTSDHWRFLTTLPDLDKASLLNLTLTGDSVFYNNQSFTCAKLSCGGSIETCKAVW 238
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL--NSGCGKVVVIDIDVHYGN 196
G K A A+VRPPGHHA+P + G+C NN +A ++ N C K++++D DVH+GN
Sbjct: 239 SGQVKNAIAVVRPPGHHAEPHKSMGFCLFNNVAVAARVIRQGNPECEKIMILDWDVHHGN 298
Query: 197 GTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDR 254
GT FY + VL +SLH G++ P +P +G + GEG G GYN+NIP G D
Sbjct: 299 GTQTAFYEDDSVLYVSLHRFEGGTFYPPYP-DGDLTYCGEGGGLGYNVNIPWATGGIRDA 357
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y++A +V+P +++P+++++ G D++A D G +T GY M ++ SLA+
Sbjct: 358 DYIYAFQRVVMPIAYEYQPDLVIISAGFDAAAGDKIGECFVTPAGYAHMTHMLMSLAN-- 415
Query: 315 SGGRLLIVQE 324
GR+ + E
Sbjct: 416 --GRVAVCLE 423
>gi|347963988|ref|XP_310554.5| AGAP000532-PA [Anopheles gambiae str. PEST]
gi|333466940|gb|EAA06256.6| AGAP000532-PA [Anopheles gambiae str. PEST]
Length = 1118
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 180/379 (47%), Gaps = 42/379 (11%)
Query: 14 EGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYI 73
G + +D+ H + L+DT + PE +R ++ G +
Sbjct: 104 RGPTGILYDERFALH---RCLWDTNY-----------PECPERYLRVMERFTIGQLVDRC 149
Query: 74 SWHSGIPAQIPQLLSFHTPDYINELVEA----DKAGGKMVC---DGTVLNPGSWGAALLA 126
+ + PA +LL+ HT + I L + D+ + + D ++P S+ ++LA
Sbjct: 150 QFVAPRPATRAELLTKHTAEQIELLAQTHGSQDEPELERLSSHYDAIFIHPTSYETSVLA 209
Query: 127 VGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKV 185
VG+T+ ++ V G + A++RPPGHHA +GYCF NN +A Q AL+ G K+
Sbjct: 210 VGSTIQLVESVWSGTVQNGMAILRPPGHHAMTAEYNGYCFFNNVAIAAQHALDHLGTQKI 269
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
+++D DVH+G GT FY +VL S+H HG++ P+ + D +G G+G GYN N
Sbjct: 270 LIVDWDVHHGQGTQRMFYSDPRVLYFSIHRYEHGTFWPN-LRESDFDYVGTGKGEGYNFN 328
Query: 245 IPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
+PL G + Y+ +L++P +F+P +I++ G D++ P G C+ +
Sbjct: 329 VPLNKTGMTNGDYLAIWQQLLLPVATEFQPELIIVSAGYDAAYGCPEG--CMETPAF--Y 384
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI-----AYY 358
++ L + GR+ +V EGG YCL + EG LL DP A
Sbjct: 385 SHLLSPLL-LMAQGRVAVVLEGG-------YCLESLAEGCALTLKTLLGDPAPRLAEALQ 436
Query: 359 PEDEAFPVKVIESIKQYQN 377
P E+ ++ I ++
Sbjct: 437 PPSESMQASILNCIYSHRK 455
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 161/310 (51%), Gaps = 13/310 (4%)
Query: 50 HPENSDRIKNIVSILKRG-PISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGG-K 107
HPE +RI I+ L ++ + G A +L H P+++ + E ++ K
Sbjct: 555 HPEQPERIAKIMQRLTGDYQLAQRMKRLPGRLATTEELCLVHGPEHVRLIGEVCQSSTMK 614
Query: 108 MVCD---GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
D +P + +A +A G+ L+ ++ VL+G + +VRPPGHHA+ G+
Sbjct: 615 QTADQYNSIYFHPSTDASARMATGSVLTVVEDVLEGRTRSGVCVVRPPGHHAEADTPHGF 674
Query: 165 CFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGP 222
C N+ +A + A+ G +V+++D DVH+GNGT F + VL +S+H ++G++ P
Sbjct: 675 CIYNSIAVAARHAVKRYGLRRVLIVDWDVHHGNGTQHIFEQDPHVLYVSVHRYDNGAFFP 734
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
+ +G G G G+N+NIP G GD YV A +++P ++EP ++++ G
Sbjct: 735 -RSTDADYTVVGSGPGRGFNVNIPWNRKGMGDPEYVAAFHSVILPIAYEYEPELVLVSAG 793
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
D++ DP G +T + Y + + LA GGRL++ EGGY+V ++ + +
Sbjct: 794 FDAAIGDPLGGCRVTPEAYGHFTQWLSVLA----GGRLVLCLEGGYNVNSISHAMAMCAK 849
Query: 342 GVLNLPLALL 351
+L PL +L
Sbjct: 850 ALLGDPLPML 859
>gi|149919736|ref|ZP_01908214.1| histone deacetylase superfamily protein [Plesiocystis pacifica
SIR-1]
gi|149819507|gb|EDM78937.1| histone deacetylase superfamily protein [Plesiocystis pacifica
SIR-1]
Length = 274
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 132/240 (55%), Gaps = 9/240 (3%)
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
AG GT LN + AA + G L A + V G +AYAL RPPGHHA+ M G
Sbjct: 35 AGAWCFDSGTPLNASTLTAAGWSAGCALDAARAVRAG-APLAYALSRPPGHHAEEDMFGG 93
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
YC+ NN+ +A + L G +VVV+DID H+GNGT F + +VLT+SLH + ++ P
Sbjct: 94 YCYFNNSAIAAR-ELRQGGARVVVLDIDFHHGNGTQSLFQTTAEVLTVSLHGDPRAYFPF 152
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+ G E GEGEG GYNLN+ L G + Y+ A+ + I+ F P+ +VL G D
Sbjct: 153 Y--TGYPRETGEGEGSGYNLNLVLEAGCDGQAYLAALEAHALTTIRHFAPDFVVLAAGLD 210
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
+ A DP G L+ + + +G +V ++ G ++ +QEGGY+ + A L G+
Sbjct: 211 AYAKDPIGDFALSTEDFHRVGELVGAI-----GVPVVAIQEGGYYTPHLGRNAVALLRGL 265
>gi|452965698|gb|EME70717.1| histone deacetylase superfamily protein [Magnetospirillum sp. SO-1]
Length = 307
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 28/305 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTG + HPE +DRIK +++ L+ + A + Q
Sbjct: 9 LQHDTG----------------DYHPECADRIKAVLAALESEEFMMLLR-DEAPHATMEQ 51
Query: 86 LLSFHTPDYINELVEA--DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
L+ H +I+ ++++ G + T+L+ S AAL + G ++A+ V G +
Sbjct: 52 LMRAHPLSHIDYVLDSVPTSDGHHHLDPDTILSRYSGEAALRSAGAGIAAVDAVAKGEVR 111
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGF 202
++ VRPPGHHA+ A G+CF NNA +A A G +V ++DIDVH+GNGT
Sbjct: 112 NSFCAVRPPGHHAERDNAMGFCFFNNAAIAALHAREVYGYKRVAIVDIDVHHGNGTQHIL 171
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTE 262
+ +L S H H ++P G DE G G G +N+PLP GTG Y A T+
Sbjct: 172 WDEKGMLYASTHQEH-----AYPNTGLADETG---GEGIMVNVPLPAGTGSDDYRMAFTD 223
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
+++P +++F P+ +++ G D+ A DP LT + + R + +A+ +G R++ +
Sbjct: 224 ILLPRLREFAPDFLIISAGFDAHAADPLAHLRLTTADFGWVTRQLLQVAEETAGNRVVSL 283
Query: 323 QEGGY 327
EGGY
Sbjct: 284 LEGGY 288
>gi|224369970|ref|YP_002604134.1| protein AcuC [Desulfobacterium autotrophicum HRM2]
gi|223692687|gb|ACN15970.1| AcuC [Desulfobacterium autotrophicum HRM2]
Length = 316
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 147/281 (52%), Gaps = 7/281 (2%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE S+R+ I L++ + ++ A + +L+ H DY+ E +G
Sbjct: 21 HPEMSERLIAIHEGLRKANLLEQLTIIPASRADLKWILAVHDHDYVRRFEEVSLSGNHYF 80
Query: 110 CD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D + ++ A LAVG L A++ ++D A+ +RPPGHHA+ A G+C+ N
Sbjct: 81 DDQDNQICVETYETAFLAVGGILDAVQMMMDQKIDNAFCAIRPPGHHAEVDKAMGFCYFN 140
Query: 169 NAGLAVQLALNSGCG--KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N +A + L S CG +V ++D DVH+GNGT F V S+H H S+ ++P
Sbjct: 141 NIAIAARY-LQSECGIERVGIVDFDVHHGNGTEHIFQSDPSVFYYSIH-EHPSF--AYPG 196
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G + G +GFG+ N P+ G GD Y +T ++PA ++F+P +I++ G D+
Sbjct: 197 TGRAFDEGTLKGFGFTKNSPVLPGRGDDNYKSLITRDLLPAFERFKPEIILVSTGFDAHV 256
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D LT +G+ + + +LA+ ++ GR++ + EGGY
Sbjct: 257 GDEMSDMNLTTEGFSWIMETIMALANHHAQGRVVSILEGGY 297
>gi|428316731|ref|YP_007114613.1| histone deacetylase superfamily [Oscillatoria nigro-viridis PCC
7112]
gi|428240411|gb|AFZ06197.1| histone deacetylase superfamily [Oscillatoria nigro-viridis PCC
7112]
Length = 307
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 145/303 (47%), Gaps = 21/303 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIP-AQIPQLL-----SFHTPDYINELVEADK 103
HPE +R+ IV+ LK P + I W P AQ Q L H+ YI E+
Sbjct: 19 HPERPERLTAIVNALKAAPWADQIEWQLPTPVAQREQQLFSAIKKVHSQRYIKEVQHLAH 78
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG + T ++ S+ ALLA L + V+ G+ A+ L RPPGHHA+ A G
Sbjct: 79 RGGGYLDGDTPISAESYDVALLAASAWLDGVDRVVAA-GEPAFVLARPPGHHAENARAMG 137
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C +NA +A + AL G +V V+D DVH+GNGT ++ SLH + P
Sbjct: 138 FCLFSNAAIAARYALEQPGINRVAVLDWDVHHGNGTQSLVENCRQIAYCSLHQS-----P 192
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P G +E G + LNIPL G G Y+ A LVVP + KFEP+++++ G
Sbjct: 193 CYPGTGDAEERGSYDNV---LNIPLYPGGGIAEYLSAFESLVVPFLSKFEPDLLIVSAGY 249
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
D++A DP L + L R + G EGGY + A + AT++
Sbjct: 250 DATASDPLASMTLMPSDFGTFTGYCLQLTRRIAFGL-----EGGYALKELAESVVATIDR 304
Query: 343 VLN 345
LN
Sbjct: 305 CLN 307
>gi|146417057|ref|XP_001484498.1| hypothetical protein PGUG_03879 [Meyerozyma guilliermondii ATCC
6260]
Length = 910
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 183/369 (49%), Gaps = 42/369 (11%)
Query: 42 GFLEVLEKHPENSDRIKNI------------VSILKRGPISPYISWHSGIPAQIPQLLSF 89
+ E ++ HPE+ RI I S+ + PY++ A ++L
Sbjct: 228 SYFEYIDPHPEDPRRIYRIYKKLAETGLIHDTSLSGSDHLGPYMTKIPVREATAEEILEV 287
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ + +K + D +N S+ +A L+ G + A K V++G K
Sbjct: 288 HSKEHLLYIQSTEKMSRDQLLEETEKGDSIYVNNDSYLSAKLSCGGAIEACKAVVEGTVK 347
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P G+C +N +A + L + ++V+ID D+H+GNGT +
Sbjct: 348 NSMAIVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKNYPESVRRIVIIDWDIHHGNGTQK 407
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
FY +VL ISLH +G + P + G +GEG G GY++NIP G GD YV+
Sbjct: 408 AFYNDPRVLYISLHRYENGRFYPG-TKYGHYSNVGEGPGEGYSVNIPWNCPGKGDGDYVY 466
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++++P I +F P+++++ G D++ D G +T GY M +++ +A G
Sbjct: 467 AFNKIILPVINEFNPDLLIVSSGFDAADGDIIGGCHVTPVGYGYMTHLLKGIAR----GN 522
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPED--EAFPVK-VIESIKQY 375
L ++ EGGY+ L + G L + LL +P PE+ A P+ IE++ +
Sbjct: 523 LAVILEGGYN-------LDSITNGALAVTKVLLGEP----PENTISALPLSDTIETVDEV 571
Query: 376 QNDVIPFLK 384
+ + K
Sbjct: 572 MKALAQYWK 580
>gi|71008885|ref|XP_758249.1| hypothetical protein UM02102.1 [Ustilago maydis 521]
gi|46097924|gb|EAK83157.1| hypothetical protein UM02102.1 [Ustilago maydis 521]
Length = 727
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 31/316 (9%)
Query: 50 HPENSDRI---------KNIVSILKRGPISPY------ISWHSGIPAQIPQLLSFHTPDY 94
HPE RI N+ + +KR PI + GI + Q L+F+ PD
Sbjct: 103 HPERPLRIFKIFMKFKESNLFARMKRVPIREVAEEEVKLVHDHGIWEGV-QRLAFYHPDV 161
Query: 95 INELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
+ E V+ + + +N S AA L+ G + + V G + +A+VRPPGH
Sbjct: 162 LKEQVQLLETNSSLY-----INEHSAYAARLSCGGAIELVNAVAAGQIQNGFAIVRPPGH 216
Query: 155 HAQPTMADGYCFLNNAGLAVQLAL--NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HA+P + G+CF NN +A ++ L ++ KV+++D DVH+GNGT F + VL IS
Sbjct: 217 HAEPQKSMGFCFFNNVAVATRVVLRRHAHIKKVLILDWDVHHGNGTQRAFEYDDNVLYIS 276
Query: 213 LHM--NHGSWGPSHPQNGTVDELGEGEGFGYNLNIP-LPNGTGDRGYVHAMTELVVPAIQ 269
LH GS+ P G D G G G G ++NIP L G GD Y++A LV+P
Sbjct: 277 LHRYDEDGSFYPG-STYGNFDSAGTGPGEGRSVNIPWLSQGMGDADYLYAFNHLVMPIAH 335
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P+++++ G D++ DP G ++ G+ +M ++ SL S G++ +V EGGY+
Sbjct: 336 EFQPDLVIISAGFDAADGDPIGLNRVSPGGFAQMTHLLTSL----SQGKVAVVLEGGYNP 391
Query: 330 TYSAYCLHATLEGVLN 345
A A ++ +L+
Sbjct: 392 EAVASSALAVVDVLLS 407
>gi|343511034|ref|ZP_08748225.1| putative acetylpolyamine aminohydrolase [Vibrio scophthalmi LMG
19158]
gi|342799980|gb|EGU35530.1| putative acetylpolyamine aminohydrolase [Vibrio scophthalmi LMG
19158]
Length = 347
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 132/263 (50%), Gaps = 13/263 (4%)
Query: 89 FHTPDYINELVEADKAG--GKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
F +P ++ + D G G D T + SW A A L+A ++ G +
Sbjct: 93 FISPRHLRHRIPKDIEGKLGYYSFDMTAAITKTSWEAIQSATDCALTAADLIMQGEQAV- 151
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRS 205
+AL RPPGHHA P + GYC++NNA +A + G GKV ++D+D H+GNGT FY
Sbjct: 152 FALCRPPGHHAAPDLMGGYCYINNAAIAAESLRRQGKGKVAILDVDYHHGNGTQSIFYER 211
Query: 206 NKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
+ VL +S+ HG +P G DE+GEG G GYNLN+PLP G D +
Sbjct: 212 DDVLFVSI---HGDPDYDYPHYIGFADEVGEGAGEGYNLNLPLPQGKTDWTLYGPALQTA 268
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
+ IQ+F + +V+ +G D+ DP L D Y E+GR + L L V E
Sbjct: 269 LEKIQQFGADALVISLGMDTYEHDPISYFKLNRDNYAEIGRQLGQLQ-----LPTLFVFE 323
Query: 325 GGYHVTYSAYCLHATLEGVLNLP 347
GGY V + A L+G +N P
Sbjct: 324 GGYAVDDLGHNTVAVLDGYMNSP 346
>gi|99081906|ref|YP_614060.1| histone deacetylase superfamily protein [Ruegeria sp. TM1040]
gi|99038186|gb|ABF64798.1| histone deacetylase superfamily [Ruegeria sp. TM1040]
Length = 342
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 125/213 (58%), Gaps = 10/213 (4%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+N +WG+A + T ++A + G + AYAL RPPGHHA MA G+CFLNN+G+A
Sbjct: 119 INADTWGSAYWSAQTAITAADLIAKGE-RAAYALCRPPGHHAFGDMAGGFCFLNNSGIAA 177
Query: 175 QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELG 234
QL + G + ++D+DVH+GNGT FY + VLT+S+H + + P G E G
Sbjct: 178 QLLRDRGL-RPAILDVDVHHGNGTQGLFYDRDDVLTLSIHADPADFYPFF--WGHSSERG 234
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
EG G GYNLN+PLP GT D ++ A+ + + ++ F +++V+ +G D+S DP
Sbjct: 235 EGRGRGYNLNLPLPRGTEDAPFLDAL-DTCLDRVRAFGCDVLVIALGLDASVDDPFQGFQ 293
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+T DG+ +G + +G L VQEGGY
Sbjct: 294 VTGDGFSRIGEAIAR-----AGLPTLFVQEGGY 321
>gi|399002827|ref|ZP_10705505.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM18]
gi|398123963|gb|EJM13490.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM18]
Length = 341
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 131/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGEQTWRSAYWSAQSAIAGAQALLDGE-PAAYALCRPPGHHARAEAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q+ L +G +V V+D D+H+G G E FY N VL +S+H + ++ P
Sbjct: 166 FCYVNNAAVAAQV-LRAGFERVAVLDTDMHHGQGIQEIFYDRNDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G G+NLN+P+ +G + ++ A E+ + A++ F ++VL +G D
Sbjct: 225 --VAGFSDERGVGAGEGFNLNLPMAHGASEADFL-AQLEVALAAVKDFAAEVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +RSL G LIVQEGGYH+
Sbjct: 282 IFELDPQSKVAVTREGFARLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|395854526|ref|XP_003799739.1| PREDICTED: histone deacetylase 6 [Otolemur garnettii]
Length = 1236
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 171/336 (50%), Gaps = 18/336 (5%)
Query: 51 PENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM- 108
PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ L+E + +
Sbjct: 143 PEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYID-LMETTQYMNERE 200
Query: 109 ------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
D L+P S+ A LA G+ L + VL + A+VRPPGHHAQ ++ D
Sbjct: 201 LHLLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEIRNGMAIVRPPGHHAQHSLMD 260
Query: 163 GYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
GYC N+ LA + A G +V+++D DVH+G GT F + VL S+H G +
Sbjct: 261 GYCMFNHVALAARYAQQKHGIQRVLIVDWDVHHGQGTQFIFNQDPSVLYFSIHRYEQGRF 320
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P H + G GEG GY +N+P G D Y+ A +++P +F+P ++++
Sbjct: 321 WP-HLKASNWSTTGFGEGQGYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVA 379
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G D+ DP G T G+ ++ ++ LA GG+L++ EGGY++ A + A+
Sbjct: 380 AGFDALRGDPKGEMAATPAGFAQLTHLLMGLA----GGKLILSLEGGYNLRSLAEGVSAS 435
Query: 340 LEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
L +L P +L P A +A V+E+++ +
Sbjct: 436 LHTLLGDPCPMLESPGAPCRSAKASLSCVLEALQPF 471
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 172/353 (48%), Gaps = 31/353 (8%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D MLNH L+D HPE RI I+ L+ +
Sbjct: 512 PVLQARTGLIYDQRMLNH---CNLWDN-----------HHPEVPQRILRIMCRLEELGFA 557
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +L++ H+ +Y+ L +K + + D + P ++ A
Sbjct: 558 GRCLTLPVRPATNAELITCHSAEYVGHLRATEKMKTRELYRESSNFDSIYICPSTFACAQ 617
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ--LALNSGC 182
LA G ++ VL G A+VRPPGHHA+ A G+CF N+ +A + A++
Sbjct: 618 LAAGAACRLVEAVLSGEVLNGVAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRA 677
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D D+H+GNGT F VL +SLH +HG++ P G ++G EG G+
Sbjct: 678 LRILIVDWDIHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMG-NEGASSQIGRAEGAGF 736
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+ NG GD Y+ A LV+P +F P ++++ G D++ DP G ++ +G
Sbjct: 737 TVNVAW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAALGDPLGGYQVSPEG 795
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLS 352
Y + ++ LA+ GR++++ EGGY++T + + A +L P LL+
Sbjct: 796 YAHLTHLLMGLAN----GRIILILEGGYNLTSISESMAACTRSLLGDPPPLLA 844
>gi|431893569|gb|ELK03432.1| Histone deacetylase 6 [Pteropus alecto]
Length = 1140
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 170/335 (50%), Gaps = 16/335 (4%)
Query: 51 PENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKAGGK 107
PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E + G
Sbjct: 105 PEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGEL 163
Query: 108 MVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++ DG
Sbjct: 164 RILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDG 223
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
YC N+ +A + A G +V+++D DVH+G GT F + VL S+H G +
Sbjct: 224 YCMFNHVAVAARYAQQKHGIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFW 283
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P H + G G+G GY +N+P G D Y+ A ++++P +F P ++++
Sbjct: 284 P-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLQVLLPVALEFHPQLVLVAA 342
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D+ DP G T G+ ++ ++ LA GGRL++ EGGY++ A + A+L
Sbjct: 343 GFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGRLILSLEGGYNLRSLAEGVSASL 398
Query: 341 EGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
+L P +L P A P ++ +E+++ +
Sbjct: 399 HTLLGDPCPMLESPGAPCPSAQSSLSCALEALEPF 433
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 169/343 (49%), Gaps = 37/343 (10%)
Query: 5 PSEPPS------PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIK 58
P +PP P + + +D M+ H L+D HPE RI
Sbjct: 464 PWQPPELPILTWPVLQARTGLVYDQQMMGH---YNLWDN-----------HHPEMPQRIS 509
Query: 59 NIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDG 112
I+ L+ +S PA +LL+ H+ +Y+ L +K + + D
Sbjct: 510 QIMCRLEELGLSRRCLILPARPATDAELLTCHSAEYVGRLRATEKMKPRELHREGANFDS 569
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
+ P ++ A LA G+T ++ VL G A+VRPPGHHA+ A G+CF N+ +
Sbjct: 570 IYICPSTFACAKLAAGSTCCLVEAVLAGEVLNGVAVVRPPGHHAEQDAACGFCFFNSVAV 629
Query: 173 AVQLA--LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGT 229
A + A ++ +++++D DVH+GNGT F +L ISLH +HG++ P + G
Sbjct: 630 AARHAQVISGHALRILIVDWDVHHGNGTQHIFEEDPSILYISLHRYDHGTFFPMGDE-GA 688
Query: 230 VDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+++G G G+ +N+ NG GD Y+ A +V+P +F P ++++ G D++
Sbjct: 689 SNQVGWAAGMGFTVNVAW-NGPRMGDAEYLAAWHRVVLPIAYEFNPELVLVSAGFDAARG 747
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G ++ +GY + ++ LA GR++++ EGGY++T
Sbjct: 748 DPLGGCQVSPEGYAHLTHLLMGLA----SGRIILILEGGYNLT 786
>gi|298294373|ref|YP_003696312.1| histone deacetylase [Starkeya novella DSM 506]
gi|296930884|gb|ADH91693.1| Histone deacetylase [Starkeya novella DSM 506]
Length = 309
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ + + + G ++ A+ ++ H D++ L EA + G +
Sbjct: 20 HPERPDRVRVLNRVFE-GEQFATLAREQAPVAEREDIVRVHPEDFVAALEEAMPSEGLVR 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG TV++PG+ A VG ++ A+ VL G A+ +RPPGHHA+ G+C N
Sbjct: 79 IDGDTVMSPGTGEAIWRGVGGSVLAVDEVLAGRAANAFVSMRPPGHHAETRTPMGFCLFN 138
Query: 169 NAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A G G+V ++D DVH+GNGT E F+ V+ S H P P
Sbjct: 139 NVAIAARHAQKVHGIGRVAIVDFDVHHGNGTQEIFWSDPSVMYASTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G+V E G + +N PL +G + A+ ++P ++ F P +I++ G D+ A
Sbjct: 194 GSVGERGTTDNI---VNAPLRSGDDGENFKAAVESRILPRLEAFGPELIIISAGFDAHAR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L D Y + R + +AD++ GGR++ V EGGY
Sbjct: 251 DPLANINLLEDDYTWVTRKLMDVADKHCGGRIVSVLEGGY 290
>gi|448312149|ref|ZP_21501899.1| histone deacetylase [Natronolimnobius innermongolicus JCM 12255]
gi|445602656|gb|ELY56628.1| histone deacetylase [Natronolimnobius innermongolicus JCM 12255]
Length = 344
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE DR++ I LK+ Y+ P + ++ + H +Y+ +
Sbjct: 13 DPG-----SRHPETPDRLRAIRERLKKKHGVEYVE---ADPCDLDRMAAVHDREYLESVR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
E GG T +W A + G A+ L+G + +++ RPPGHHA
Sbjct: 65 EFCADGGGSWDPDTTAVEETWDAVRHSTGLACWAVDEALEGATGRETPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NNA +A Q AL++ +V ++D DVH+GNGT + FY V +S+H
Sbjct: 125 YDDAMGFCFVNNAAVAAQYALDTDEYDVDRVAIVDWDVHHGNGTQDIFYDREDVYFVSIH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G +DE GE G G +N+P+P GT D Y+ A+ +V A+ F+P+
Sbjct: 185 EQ-----GLYPGTGAIDETGEDAGAGTTMNVPMPAGTDDGEYLAAVEGPIVRALTDFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y M +R+LA I+ EGGY +
Sbjct: 240 LLLISAGFDAHRHDPISRIRLSTEAYALMADRLRTLAADVDAALAFIL-EGGYGLDVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVAIVHETFDG 309
>gi|392593606|gb|EIW82931.1| histone deacetylase clr3 [Coniophora puteana RWD-64-598 SS2]
Length = 670
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 161/307 (52%), Gaps = 19/307 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +RI+++ + ++R + + + A+ ++L H+ ++ + + +
Sbjct: 66 HPEAPERIQSVYAAIQRAGLFESMKYIPIRAAKEHEVLLVHSAGLWAKVRAFENMTRQEI 125
Query: 110 CDGT--------VLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
D + + AALL+ G + A V G K ++A+VRPPGHHA+P
Sbjct: 126 SDSESYYDSLSLYVMEQTTRAALLSCGGVIEASLAVARGELKKSFAIVRPPGHHAEPDEH 185
Query: 162 DGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+CF NN +A ++ + +++++D DVH+GNGT F VL ISLH G+
Sbjct: 186 MGFCFFNNVAVAARVVQQLTPIRRILILDWDVHHGNGTQRAFNDDPSVLYISLHRYEKGT 245
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P G+++ GEG+G GY++NIP P G D Y+HA ++V+P +F P ++++
Sbjct: 246 FYPCGP-FGSMESCGEGDGLGYSVNIPWPRKGMVDADYIHAFQQIVMPICVEFAPELVII 304
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYC 335
G D++ D G +T GY M ++ LA GG++++ EGGY+ ++ SA
Sbjct: 305 SAGFDAADGDDLGECHVTPAGYAHMTHMLSGLA----GGKVVVALEGGYNLDSISKSALA 360
Query: 336 LHATLEG 342
+ L G
Sbjct: 361 VARVLTG 367
>gi|4490314|emb|CAB38805.1| putative protein [Arabidopsis thaliana]
gi|7270295|emb|CAB80064.1| putative protein [Arabidopsis thaliana]
Length = 359
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 148/306 (48%), Gaps = 24/306 (7%)
Query: 43 FLEVLEKHPENSDRIKNIVSILKRGPISP------YISWHSGIPAQIPQLLSFHTPDYI- 95
+L+ E HPE S R+ IV+ L+ ++P + + A + + + H Y+
Sbjct: 8 YLQHWESHPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVF 67
Query: 96 ---NELVEADKAG-------GKMVCDGTVLN-PGSWGAALLAVGTTLSAMKHVLDGHGKI 144
+ EA +G G TV S GA + V + + + + I
Sbjct: 68 GLEKAMDEASDSGLIFIEGSGPTYATSTVTALCSSAGAGMALVDSVVMSRLTINSVDPPI 127
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFY 203
+AL+RPPGHHA P G+C N +A + A + G ++ +ID DVH+GNGT + F
Sbjct: 128 GFALIRPPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFT 187
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
+ +S H + S+P G + ++G+G+G G LN+PLP G+GD E+
Sbjct: 188 EDPDIFFLSTHQDG-----SYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEI 242
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
+VP Q+F+P++I++ G D+ DP T Y + + ++ LA GGR +
Sbjct: 243 IVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFL 302
Query: 324 EGGYHV 329
EGGY++
Sbjct: 303 EGGYNL 308
>gi|350400444|ref|XP_003485837.1| PREDICTED: histone deacetylase 6-like [Bombus impatiens]
Length = 1173
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 169/346 (48%), Gaps = 28/346 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +DD ML H D D HPE RI I + +
Sbjct: 547 VCIVYDDRMLKH------CDMSND--------NHPEKPHRINIIYKKYQECNLLDRCYVQ 592
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTT 130
G A +L+ H+ +YI+ + + + K + + L+P +W +A ++ G+
Sbjct: 593 QGRSATREELILVHSKEYIDSIKDTENLNPKELKRQAENYNSVYLHPETWTSACISTGSL 652
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVID 189
L + VL+G + A+VRPPGHHA A G+C NN +A + A+ +V+++D
Sbjct: 653 LQVVDSVLNGESQSGIAIVRPPGHHAAENTACGFCIFNNIAVAARYAVEFHHVKRVLIVD 712
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL- 247
DVH+GNGT F K+L +S+H ++G++ P+ + +G G G+ +NIP
Sbjct: 713 WDVHHGNGTQSIFEEDPKILYMSVHRYDNGNFFPN-SKRANYSYVGSLSGEGFTVNIPWN 771
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
G GD Y+ A ++++P +F P ++++ G D+ DP G +T + Y + +
Sbjct: 772 KKGMGDAEYIAAFQQIIMPIAYQFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWL 831
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSD 353
SLA+ GR+++ EGGY++ A+ + + +L PL +L +
Sbjct: 832 SSLAN----GRIILSLEGGYNINSVAHAMAICTKSLLGDPLPILEN 873
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 15/247 (6%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D ++P ++ +LLAVG+T++ ++ + + A++RPPGHHA + GYCF NN
Sbjct: 206 DAIYIHPSTYQLSLLAVGSTINLVESICKEEIQNGMAIIRPPGHHAMKSEYCGYCFFNNV 265
Query: 171 GLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+A + L+S K++++D D+H+G T + FY +V+ S+H +G + P+ +
Sbjct: 266 AIAAEKVLSSNLASKILIVDWDIHHGQATQQMFYNDPRVIYFSIHRYENGEFWPN-LRES 324
Query: 229 TVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+G+G G GYN N+PL G + Y+ ++++P +F+P++I++ G D++
Sbjct: 325 NFHFVGDGLGEGYNFNVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALG 384
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
P G LT Y + + SLA G++ ++ EGG YCL + E
Sbjct: 385 CPEGEMLLTPACYAHLLSSLLSLA----SGKVAVILEGG-------YCLKSLAESAALTL 433
Query: 348 LALLSDP 354
LL DP
Sbjct: 434 RTLLGDP 440
>gi|118369564|ref|XP_001017986.1| Histone deacetylase family protein [Tetrahymena thermophila]
gi|89299753|gb|EAR97741.1| Histone deacetylase family protein [Tetrahymena thermophila SB210]
Length = 2774
Score = 145 bits (365), Expect = 5e-32, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 17/242 (7%)
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA-QPTMADGYCFLNNAG 171
T N S AA L VG + ++ ++ K A+ ++RPPGHH+ + + G+CF NN
Sbjct: 2218 TYFNQSSKDAAYLGVGGVIESVDRIISKQWKNAFCIIRPPGHHSGESKVCTGFCFFNNVA 2277
Query: 172 LAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTV 230
+A + L N G KV++ D D+H+G+GT F VL +S+H + G +PQ+G+V
Sbjct: 2278 IAAKYLQKNHGVKKVLIFDWDIHHGDGTQHIFQDDPNVLFVSMHRHDD--GSFYPQSGSV 2335
Query: 231 DELGEGEGFGYNLNIPLPNG-------TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G GEG G+ +NIP G G Y++A + P IQ+F+P I++ G D
Sbjct: 2336 TNNGSGEGKGFKINIPWDIGYSQNALTAGTDEYIYAFERIAFPIIQEFQPEFILISAGFD 2395
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATL 340
S+ DP G+ LT +GY + R L D +G +L+V EGGY+ ++++A + TL
Sbjct: 2396 SAEGDPLGQCKLTYEGY---AYLTRRLMDITNGKNILVVLEGGYNLESISWAAESVLRTL 2452
Query: 341 EG 342
G
Sbjct: 2453 TG 2454
>gi|326669858|ref|XP_693858.4| PREDICTED: histone deacetylase 6 [Danio rerio]
Length = 1081
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 159/294 (54%), Gaps = 21/294 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIP---QLLSFHTPDYINELVEADKAGG 106
HPE RI I S R +S IPA++ +L H+ +I+ + ++
Sbjct: 463 HPELPQRISRIFS---RHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKP 519
Query: 107 KMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ + + ++ S+ ALLA G+ ++ + +L G + A A+VRPPGHHA+
Sbjct: 520 RDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDT 579
Query: 161 ADGYCFLNNAGLAVQLA--LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NH 217
A G+CF N A L + A + +V+++D DVH+GNGT F + VL ISLH
Sbjct: 580 ACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYED 639
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMI 276
G++ P+ ++ D++G G+G GYN+NIP G GD Y+ A LV+P ++F P ++
Sbjct: 640 GAFFPN-SEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELV 698
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
++ G D++ DP G +T +GY + + SLA GR+LI+ EGGY++T
Sbjct: 699 LVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLA----AGRVLIILEGGYNLT 748
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 21/344 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI------NELVEADK 103
HPE R+ ++ +L+ + +LL HT +Y+ + E +
Sbjct: 82 HPECPARVSTVMEMLETEGLLGRCVQVEARAVTEDELLLVHTKEYVELMKSTQNMTEEEL 141
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D L+PG + +A L+VG+ L + V+ + +++ RPPGHHAQ +G
Sbjct: 142 KTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSINRPPGHHAQADKMNG 201
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+C NN +A + A +V+++D DVH+G G F VL S+H GS+
Sbjct: 202 FCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFW 261
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P H + +G G G GYN+N+P G Y+ A +L++P +F+P ++++
Sbjct: 262 P-HLKESDSSSVGSGAGQGYNINLPWNKVGMESGDYITAFQQLLLPVAYEFQPQLVLVAA 320
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D+ DP G ++ + + + +++ +A GRL++ EGGY+ L +T
Sbjct: 321 GFDAVIGDPKGGMQVSPECFSILTHMLKGVAQ----GRLVLALEGGYN-------LQSTA 369
Query: 341 EGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
EGV +LL DP + P A ++SI + +D+ PF K
Sbjct: 370 EGVCASMRSLLGDPCPHLPSSGAPCESALKSISKTISDLYPFWK 413
>gi|326475552|gb|EGD99561.1| histone deacetylase HdaA [Trichophyton tonsurans CBS 112818]
Length = 794
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 166/342 (48%), Gaps = 30/342 (8%)
Query: 46 VLEKHPENSDRIKNIVSILKR-----------GPISPY-ISWHSGIPAQIPQLLSFHTPD 93
L+ HPE+ R+ I L R GP+ P + A +++ HT +
Sbjct: 166 TLDVHPEDPRRVYYIYRELGRAGLIADGGEFQGPLVPQPLKRIEARDATEAEIMLVHTKE 225
Query: 94 YINELVEADKAGGK-------MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAY 146
+ E V++ K + D N ++ +ALL+ G + K V + K A
Sbjct: 226 HY-EFVKSTKDMSEDELLELEHTRDSIYFNSLTFTSALLSCGGAIETCKAVAEERVKNAI 284
Query: 147 ALVRPPGHHAQPTMADGYCFLNN---AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFY 203
A++RPPGHHA+ G+C NN A A Q L C K++++D DVH+GNG FY
Sbjct: 285 AVIRPPGHHAESNKTMGFCLFNNVSVAARACQHVLGDKCRKIMILDWDVHHGNGVQRMFY 344
Query: 204 RSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMT 261
VL IS+H+ GS+ P + G D GEG G G N+NIP P G GD Y++A
Sbjct: 345 NDPNVLYISIHVYRDGSFYPGGDE-GNWDYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQ 403
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E+V+P +F+P+++++ G D++A D G +T Y M R++ +LA+ G++ +
Sbjct: 404 EVVMPIGYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYSHMTRMLMNLAN----GKVAV 459
Query: 322 VQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEA 363
EGGY+ + A ++ P L+ P A P E
Sbjct: 460 CLEGGYNFRSISKSALAVTRTLMGEPPDRLTAPSASRPAVET 501
>gi|427723376|ref|YP_007070653.1| histone deacetylase superfamily protein [Leptolyngbya sp. PCC 7376]
gi|427355096|gb|AFY37819.1| histone deacetylase superfamily [Leptolyngbya sp. PCC 7376]
Length = 305
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 35/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I + + + L HDTG+ HPE+ R+ +I L + + W
Sbjct: 1 MIYLIYSEQFLEHDTGR----------------PHPESFRRLVSITKALHEISWANQLQW 44
Query: 76 H--SGIPAQ--IPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
H I + +P +L H+P+Y+ EL + +GG TV++ S+ ALLAV L
Sbjct: 45 HEPKAITERDPMPWILKLHSPEYLGELKKVADSGGAHWDPDTVVSSRSYEVALLAVNACL 104
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDI 190
+ +L G A+ALVRPPGHHA + A G+C L + + AL+ +V ++D
Sbjct: 105 DGIDKIL-ATGGPAFALVRPPGHHAVRSNAMGFCLLGSVAITAHYALSFENISRVAILDW 163
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT + +L SLH P++P G G+ LNIP+ G
Sbjct: 164 DVHHGNGTEYLVEDNPDILYCSLHQY-----PAYPGTGKASFTGKHNNV---LNIPMAPG 215
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
+ Y H V+P +++F+P+++++ G D+SA DP L Y+ ++L
Sbjct: 216 SNGVAYRHQFESAVLPRLRQFQPDILLVSAGYDASAKDPLAGMNLEPSDYKRFSEYCQTL 275
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
+L EGGYH+ A + ATLE +N
Sbjct: 276 K-----CPILFALEGGYHLKDLAESVVATLEPFVN 305
>gi|157278867|gb|AAI15263.1| Hdac6 protein [Danio rerio]
Length = 929
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 159/294 (54%), Gaps = 21/294 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIP---QLLSFHTPDYINELVEADKAGG 106
HPE RI I S R +S IPA++ +L H+ +I+ + ++
Sbjct: 311 HPELPQRISRIFS---RHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKP 367
Query: 107 KMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ + + ++ S+ ALLA G+ ++ + +L G + A A+VRPPGHHA+
Sbjct: 368 RDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDT 427
Query: 161 ADGYCFLNNAGLAVQLA--LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NH 217
A G+CF N A L + A + +V+++D DVH+GNGT F + VL ISLH
Sbjct: 428 ACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYED 487
Query: 218 GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMI 276
G++ P+ ++ D++G G+G GYN+NIP G GD Y+ A LV+P ++F P ++
Sbjct: 488 GAFFPN-SEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELV 546
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
++ G D++ DP G +T +GY + + SLA GR+LI+ EGGY++T
Sbjct: 547 LVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLA----AGRVLIILEGGYNLT 596
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 15/273 (5%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
L+PG + +A L+VG+ L + V+ + +++ RPPGHHAQ +G+C NN +A
Sbjct: 1 LHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSINRPPGHHAQADKMNGFCMFNNLAIAA 60
Query: 175 QLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDE 232
+ A +V+++D DVH+G G F VL S+H GS+ P H +
Sbjct: 61 RYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWP-HLKESDSSS 119
Query: 233 LGEGEGFGYNLNIPLPNGTGDRG-YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNG 291
+G G G GYN+N+P + G Y+ A +L++P +F+P ++++ G D+ DP G
Sbjct: 120 VGSGAGQGYNINLPWNKVGMESGDYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKG 179
Query: 292 RQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALL 351
++ + + + +++ +A GRL++ EGGY+ L +T EGV +LL
Sbjct: 180 GMQVSPECFSILTHMLKGVAQ----GRLVLALEGGYN-------LQSTAEGVCASMRSLL 228
Query: 352 SDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
DP + P A ++SI + +D+ PF K
Sbjct: 229 GDPCPHLPSSGAPCESALKSISKTISDLYPFWK 261
>gi|86138389|ref|ZP_01056963.1| acetylpolyamine aminohydrolase [Roseobacter sp. MED193]
gi|85824914|gb|EAQ45115.1| acetylpolyamine aminohydrolase [Roseobacter sp. MED193]
Length = 341
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 124/210 (59%), Gaps = 10/210 (4%)
Query: 118 GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA 177
G+W A+ + + +S ++L+G G+ AY L RPPGHHA MA G+CFLNN+G+A Q
Sbjct: 122 GTWEASYWSAQSAISGADYLLEG-GQSAYVLARPPGHHAFADMAGGFCFLNNSGIAAQRL 180
Query: 178 LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGE 237
+G + ++D+DVH+GNGT FY + VLT+SLH + + P G E GEG
Sbjct: 181 AAAGL-RPAIVDVDVHHGNGTQGIFYNRDDVLTVSLHADPERFYPFF--WGHAQERGEGA 237
Query: 238 GFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTM 297
G GYNLN+PL GT D G++ A+ ++ + + F +++V+ +G D+S DP +T
Sbjct: 238 GLGYNLNLPLARGTDDEGFLKAL-DVALQRVTLFGADVVVVALGLDASIDDPFQGLAVTK 296
Query: 298 DGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+G+ +G L G +L VQEGGY
Sbjct: 297 EGFSRIGAAFAHL-----GLPVLFVQEGGY 321
>gi|90422663|ref|YP_531033.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
BisB18]
gi|90104677|gb|ABD86714.1| histone deacetylase superfamily [Rhodopseudomonas palustris BisB18]
Length = 309
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DR++ + L S + A + + HT +I EL + G +
Sbjct: 20 HPERADRLRAVNQGLAEARFSA-LQRSEAPEADLDTIALCHTDHHIVELRQMSPQTGLIF 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T ++PG+W AAL +VG ++A V+ G A+ RPPGHHA+ G+CF
Sbjct: 79 VDSDTSMSPGTWEAALRSVGGAVAATDAVMTGQVHNAFVATRPPGHHAEIGKPMGFCFFG 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA +A + A G G+ V+D DVH+GNGT E F+ V+ S H P P
Sbjct: 139 NAAIAARYAQRKYGIGRAAVVDFDVHHGNGTQEIFWGDKTVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G V E GE + +N PL + G + A +L++P + F P +IV+ G D+
Sbjct: 194 GAVGERGEHDNI---VNAPLQSEDGTAKFRAAFDDLILPRLTAFAPELIVISAGFDAHCR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + + + +AD +GGR++ V EGGY
Sbjct: 251 DPLASLNLQTEDFAWVTQKLMDVADLSAGGRIVSVLEGGY 290
>gi|384220817|ref|YP_005611983.1| hypothetical protein BJ6T_71470 [Bradyrhizobium japonicum USDA 6]
gi|354959716|dbj|BAL12395.1| hypothetical protein BJ6T_71470 [Bradyrhizobium japonicum USDA 6]
Length = 309
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ + L + +++ + + H Y+ EL G++
Sbjct: 20 HPERPDRLRAVEEALSQERFQ-FLARDLAPEGDLDLVTLCHNEHYVTELRHIAPTSGQVY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A + V++G + A+ VRPPGHHA+ G+CF +
Sbjct: 79 IDGDTSMSPGTWEAVMRGVGGAVAATEAVMNGEHRNAFVAVRPPGHHAEIGKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA +A + A G + +ID DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NAAIAARHAQRKYGIQRAAIIDFDVHHGNGTQDIFWSDPTVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL + G + A L++P ++KF P ++V+ G D+
Sbjct: 194 GAKGERGDHDTI---VNAPLASEDGGPEFRAAFEHLILPRLEKFSPELLVISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + Y + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDYTWVTRKLMDLADKSAGGRIVSVLEGGY 290
>gi|307153347|ref|YP_003888731.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7822]
gi|306983575|gb|ADN15456.1| histone deacetylase superfamily [Cyanothece sp. PCC 7822]
Length = 343
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 121/218 (55%), Gaps = 9/218 (4%)
Query: 112 GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAG 171
GT + G+W AA + L+A + + G + +AL RPPGHHA + GYCFLNNA
Sbjct: 118 GTPITAGTWRAARASANVALTAQQLLAAGEQAV-FALCRPPGHHAATNLYGGYCFLNNAA 176
Query: 172 LAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVD 231
+A Q L+ G +V ++D+D H+GNGT E FY VL +SLH + P G D
Sbjct: 177 IAAQALLDGGATRVAILDVDYHHGNGTQEIFYHRRDVLFVSLHADPRVEYPYFL--GYED 234
Query: 232 ELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNG 291
E G +G G+NLN PLP GT + Y + ++ + I+ + P+++V+ +G D+ +DP
Sbjct: 235 EKGAADGVGFNLNYPLPWGTDWQQYRQTL-KIALDFIKNYHPDVLVVSLGVDTFEYDPIS 293
Query: 292 RQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+ CL + Y +G+ + S+ L V EGGY V
Sbjct: 294 KFCLKTEDYLTLGKDIASIHK-----PTLFVMEGGYAV 326
>gi|380492726|emb|CCF34396.1| histone deacetylase [Colletotrichum higginsianum]
Length = 745
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 168/333 (50%), Gaps = 44/333 (13%)
Query: 50 HPENSDRIKNIVSILKR------GPISPYIS----------WHSGI-PAQIPQLLSFHTP 92
HPE+ RI+ I KR GP S W G A ++L+ HTP
Sbjct: 95 HPEDPRRIEEIYKAFKRAGLVYTGPESKIADVMRDTPTKYMWRIGTREATKEEILTTHTP 154
Query: 93 DYINELVEADKAGGKMVCDGT--------VLNPGS--WGAALLAVGTTLSAMKHVLDGHG 142
+ + + K + D + L GS + AALL+ G + KHV++G+
Sbjct: 155 LHYHWVESLSKMNYTELRDTSRHYDQGRASLYVGSLTFTAALLSCGGAIDTCKHVVEGNV 214
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTA 199
K A+A++RPPGHHA+ G+CF NN +AV++ C KV+++D DVH+GNG
Sbjct: 215 KNAFAIIRPPGHHAEYDQPLGFCFFNNVPVAVKICQQEYPEDCRKVLILDWDVHHGNGIQ 274
Query: 200 EGFYRSNKVLTISLHM-NHGSWGPSHPQN-----GTVDELGEGEGFGYNLNIPLPN-GTG 252
FY VL +SLH+ +G + P P N G ++ G G G G N+NI + G G
Sbjct: 275 NIFYDDPNVLYVSLHVYQNGIFYPGKPDNQEIPDGGLEHCGTGPGLGKNINIGWHDQGMG 334
Query: 253 DRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLAD 312
D Y+ A ++++P ++F P+++V+ G D++A D G +T Y M ++ SLAD
Sbjct: 335 DGEYMAAFQKIIMPIAKEFNPDLVVISAGFDAAAGDELGGCFVTPTCYAHMTHMLMSLAD 394
Query: 313 RYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
G++ + EGGY+ ++ SA + TL G
Sbjct: 395 ----GKVAVCLEGGYNLQAISTSAVAVARTLMG 423
>gi|339322715|ref|YP_004681609.1| histone deacetylase superfamily protein [Cupriavidus necator N-1]
gi|338169323|gb|AEI80377.1| histone deacetylase superfamily [Cupriavidus necator N-1]
Length = 314
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 12/300 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ +R++ +V L R P + W + QL H YI+E+ ++ G +
Sbjct: 21 HPESPERLRAVVQAL-RTPEFASLEWRDAPMGTVEQLQLIHDLHYIDEIAQSAPTQGYVP 79
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
D T+++PGSW A + VG + + V+DG + + RP GHHA+P A G+C
Sbjct: 80 LDAGDTIMSPGSWEAVMRCVGAACAGVDAVMDGQARNVFCATRPCGHHAEPAKAMGFCIF 139
Query: 168 NNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N A +A A +V V+D DVH+GNGT F+ ++ S H + P +P
Sbjct: 140 NQAAIAAAYAYEVHKLERVAVVDFDVHHGNGTQAAFFDRPELFYASSHQS-----PFYPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G +N+PLP G + A++ LV+P+++ F P ++++ G D+
Sbjct: 195 TGARSETGVNHNI---VNVPLPRGCEPAQFRAAISALVLPSLRAFAPEILIVSAGFDAHR 251
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
DP L + + + + +AD GR++ + EGGY + A A + ++ L
Sbjct: 252 LDPLAGMNLEDSDFHWITKELMQIADETCDGRIVSILEGGYSLDALATSAMAHVSALMQL 311
>gi|163856209|ref|YP_001630507.1| histone deacetylase [Bordetella petrii DSM 12804]
gi|163259937|emb|CAP42238.1| histone deacetylase family protein [Bordetella petrii]
Length = 307
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 147/284 (51%), Gaps = 15/284 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ R+ I L ++P+++ H A +L HT +++ L A G
Sbjct: 20 HPESPQRLDAIADQLLVSGLAPFLAEHEAPAATREAILRVHTAGHLDSLHARSPAEGYCT 79
Query: 110 CD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T++NP ++ AAL A G ++A+ V+ G A+ VRPPGHHA+ + A G+CFLN
Sbjct: 80 IDPDTMMNPHTYEAALHAAGAGIAAVDAVMGGQAANAFCAVRPPGHHARRSQAMGFCFLN 139
Query: 169 NAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A Q A+ G +V ++D DVH+GNGT + F ++VL S + P P +
Sbjct: 140 NVAIAAQHAMQVHGVRRVAIVDFDVHHGNGTEDVFAGDDRVLMCSFFQH-----PFFPNS 194
Query: 228 GTVDELGEGEGFGYNL-NIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
GT E N+ N+P+P T + ++ +P +Q P +I++ G D+
Sbjct: 195 GT-------EHPAANMVNVPVPAYTDGAAVRELVRDVWLPRLQAHAPELILISAGFDAHR 247
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
D G+ L Y + V +ADR++ GR++ + EGGY+++
Sbjct: 248 EDDMGQMGLVEADYAWITERVAEVADRHAQGRIVSMLEGGYNLS 291
>gi|390438178|ref|ZP_10226670.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389838406|emb|CCI30794.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 305
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + + L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSEEFLDHDTGI----------------YHPEKAARLTAIVEALKQTKWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPLEIRDEVIPLIKQVHNQDYVDRLRRICQRGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPL
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLSA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|301630492|ref|XP_002944351.1| PREDICTED: histone deacetylase 6 [Xenopus (Silurana) tropicalis]
Length = 1165
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 170/321 (52%), Gaps = 26/321 (8%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQI---PQLLSFHTPDYINELVEADKAGG 106
HPE+ RI I KR + S IP+++ +L H+ YI ++ +
Sbjct: 501 HPESPQRINQI---FKRHKDLGLLDRCSRIPSRLATQKELQMCHSLSYIQKIEASAHMKP 557
Query: 107 KMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ + + +N S+ +A LA G+T S ++ V+ G + +VRPPGHHA+P
Sbjct: 558 RDLHRLGNEYNSIYINSRSYHSARLAAGSTFSVVEAVVTGKAQNGVCIVRPPGHHAEPAE 617
Query: 161 ADGYCFLNNAGLAVQLA--LNSGCG---KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A G+CF N LA + A L S +V+++D DVH+GNGT F VL +SLH
Sbjct: 618 ACGFCFFNTVALAARYAQRLRSRSEDPLRVMILDWDVHHGNGTQHIFQEDASVLYVSLHR 677
Query: 216 -NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GDRGYVHAMTELVVPAIQKFE 272
+ G + P+ ++ + D++G G+G G+N+NIP NG+ GD Y+ A +V+P +F
Sbjct: 678 YDEGLFFPNS-EDASHDKVGIGKGAGFNVNIPW-NGSKMGDPEYLMAFHRVVMPIAYEFN 735
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P ++++ G D++ DP G ++ +GY M ++ LA GGR+++V EGGY++T
Sbjct: 736 PQLVLISAGFDAARGDPLGGCQVSPEGYAHMTHLLMGLA----GGRVILVLEGGYNLTSI 791
Query: 333 AYCLHATLEGVLNLPLALLSD 353
+ + +L P LSD
Sbjct: 792 SESMVMCTHSLLGDPPPTLSD 812
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 139/296 (46%), Gaps = 27/296 (9%)
Query: 89 FHTPDYI-------NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
H+P Y+ N VE +A D L+P S+ A LAVG+ L + VL
Sbjct: 139 IHSPQYVALMGSTQNMNVEELQALSDRY-DSVYLHPTSFTCASLAVGSVLQLVDKVLRRE 197
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA +GYC N +A + A + G +V+++D DVH+G GT
Sbjct: 198 IRNGLAVVRPPGHHAHVDQMNGYCMFNQLAIAARYAQRTYGAKRVLIVDWDVHHGQGTQF 257
Query: 201 GFYRSNKVLTISLHM--NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT--GDRGY 256
F VL S+H N G W H + +G+ G +N+N+ N T D Y
Sbjct: 258 LFENDPSVLYFSVHRYENGGFW--PHLRESASSAVGKERGERFNVNVAW-NKTRMSDADY 314
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+H +++P +F+P+++++ G DS DP G T + + ++ SLA
Sbjct: 315 IHVFLNILLPIAYEFQPHLVLVAAGFDSVVGDPKGEMSATPGCFSHLTHLLMSLAQ---- 370
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESI 372
GRL++ EGGY+ A EGV ALL DP P A ++SI
Sbjct: 371 GRLILSLEGGYNQRSLA-------EGVCACLKALLGDPCPKLPLPSAPCQSALDSI 419
>gi|386400633|ref|ZP_10085411.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. WSM1253]
gi|385741259|gb|EIG61455.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. WSM1253]
Length = 341
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 155/318 (48%), Gaps = 49/318 (15%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA 101
G ++ + PE +DR+ + K + P ++ G A+I H+P+Y++ L EA
Sbjct: 21 GVVKRTTEQPERADRLLKGLKDGKHQLVEP-TTFGQGPRARI------HSPEYLSFLSEA 73
Query: 102 --------------------------------DKAGGKMVCDGTVLNPGSWGAALLAVGT 129
K G + PG+W AA A
Sbjct: 74 WDAWTALGDSGPEMIGNIHPVRHAATYPTHITGKLGWHTADTAAPIGPGTWAAACAATDV 133
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
++A + V+DG YAL RPPGHHA MA G+CFLNN+ +A L +VV++D
Sbjct: 134 AVTAAQMVMDGE-DATYALCRPPGHHAYRDMAGGFCFLNNSAIAAA-HLRQKHERVVILD 191
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
+DVH+GNGT FY V T+S+H + ++ P G E GEG G G NLNIPL
Sbjct: 192 VDVHHGNGTQGIFYARPDVYTVSIHADPVAYYPY--VWGYAHERGEGPGLGTNLNIPLAI 249
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
GTGD GY+ AM ++ AI+ F P +V+ +G D+S DP +T G+R +G+ +
Sbjct: 250 GTGDDGYIQAM-DVARKAIESFAPGALVIALGLDASEHDPLKGLAVTTRGFRRIGQAIAK 308
Query: 310 LADRYSGGRLLIVQEGGY 327
L G + VQEGGY
Sbjct: 309 L-----GLPTVFVQEGGY 321
>gi|354485959|ref|XP_003505149.1| PREDICTED: histone deacetylase 6-like [Cricetulus griseus]
Length = 1135
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 176/358 (49%), Gaps = 34/358 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D+ M++H L+D HPE RI I+ L+ ++
Sbjct: 474 PVLQDRTGLVYDEKMMSH---CNLWDN-----------HHPETPQRILRIMCHLEEVGLT 519
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y++ + +K + + D + P ++ A
Sbjct: 520 ARCLILPVRPAMDAELLACHSAEYVDRVRATEKMKTRELHREGANFDSIYICPSTFACAQ 579
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ--LALNSGC 182
LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A+
Sbjct: 580 LATGAACCLVEAVLSGQVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQAIAGRA 639
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +S+H +HG++ P + G ++G G G+
Sbjct: 640 LRILIVDWDVHHGNGTQHMFEDDPSVLYVSVHRYDHGTFFPMGDE-GASSQVGRAAGIGF 698
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+P NG GD Y+ A LV+P +F P ++++ G D++ DP G +T +G
Sbjct: 699 TVNVPW-NGPRMGDADYLTAWHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVTPEG 757
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP---LALLSDP 354
Y + ++ LA+ GR++++ EGGY++ + + A +L P L LL P
Sbjct: 758 YAHLTHLLMGLAN----GRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 811
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 17/335 (5%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE +R+ I ++ + +S+ + A+ +L+S
Sbjct: 84 GTGLVFDEQLNDFHCLWDDSFPECPERLHAIKEQLILESLLDRCVSFQARF-AEKEELMS 142
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ +YI+ E + G + D L+P S+ A LA G+ L + VL
Sbjct: 143 VHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYSCACLATGSVLRLVDAVLGAEI 202
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A++RPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 203 RNGMAVIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFI 262
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
F + VL S+H G + P H + G G+G GY +N+P G D Y+ A
Sbjct: 263 FDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAA 321
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G D+ DP G T G+ + + LA GG++
Sbjct: 322 FLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAHLTHFLMGLA----GGKV 377
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
++ EGGY++ A + A+L +L P +L P
Sbjct: 378 ILSLEGGYNLHALAKGVSASLHTLLGDPCPMLESP 412
>gi|381165919|ref|ZP_09875138.1| putative deacetylase [Phaeospirillum molischianum DSM 120]
gi|380684903|emb|CCG39950.1| putative deacetylase [Phaeospirillum molischianum DSM 120]
Length = 310
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 159/305 (52%), Gaps = 28/305 (9%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L HDTG + HPE +DRIK +++ L+ S + + A + Q
Sbjct: 12 LEHDTG----------------DYHPECADRIKAVIAALESEEFSMLLR-DTAPRATMEQ 54
Query: 86 LLSFHTPDYINELVEADKAGGKM--VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
++ H DYI+ ++E+ G + + + TVL+ S AAL A G ++A+ V G
Sbjct: 55 VMRAHPLDYIDLVLESAPTGPGLHSLDNDTVLSEHSGEAALRAAGAGVAAVDAVASGQVH 114
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGF 202
+ +VRPPGHHA+ + A G+CF NNA +A A ++ G +V V+D DVH+GNGT +
Sbjct: 115 NCFCVVRPPGHHAEISTAMGFCFFNNAAIAALHARDAHGFKRVAVVDFDVHHGNGTQQIL 174
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTE 262
+ S H H ++P G+ DE G G G +NIPLP GTG + A +
Sbjct: 175 WDQPGTFYASTHQEH-----AYPDTGSADETG---GKGMIVNIPLPAGTGSADFRMAFGD 226
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
+++P ++ F P+ +++ G D+ A DP LT + R + +A+ Y+G R++ V
Sbjct: 227 MLIPRLRAFAPDFVIISAGFDAHASDPLAHLRLTTADFGWATREILQVAEEYAGRRVVSV 286
Query: 323 QEGGY 327
EGGY
Sbjct: 287 LEGGY 291
>gi|390568202|ref|ZP_10248512.1| histone deacetylase superfamily protein [Burkholderia terrae BS001]
gi|389939892|gb|EIN01711.1| histone deacetylase superfamily protein [Burkholderia terrae BS001]
Length = 311
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ +R+K ++ L R P + W + Q+ H+ D+I+E+ + G M
Sbjct: 21 HPESPERLKTVLQTL-RSPEFAALEWRDAPMGTLEQVQFIHSQDFIDEVADIAPKHGYMP 79
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG TV++PGSW A + VG + + VL+ + + RP GHHA+P A G+C
Sbjct: 80 LDGGDTVMSPGSWEAVMRCVGAACAGVDAVLNKDARNVFCATRPCGHHAEPGKAMGFCIF 139
Query: 168 NNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N A +A A + +V V+D DVH+GNGT FY ++ S H + P +P
Sbjct: 140 NQAAIAAAYAYDVHKLERVAVVDFDVHHGNGTQAAFYDRPELFYASSHQS-----PLYPG 194
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G LN+PLP G + + ++PA+++F P +I++ G D+
Sbjct: 195 TGKSAETGVSHNI---LNVPLPPGCDSDLFRSRIEADMLPAVREFRPELIIISAGFDAHR 251
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L D + + R + +AD GR++ + EGGY
Sbjct: 252 LDPLAALRLDDDDFHWITRELVRIADETCEGRVVSILEGGY 292
>gi|448735068|ref|ZP_21717286.1| HdaI-type histone deacetylase [Halococcus salifodinae DSM 8989]
gi|445798937|gb|EMA49322.1| HdaI-type histone deacetylase [Halococcus salifodinae DSM 8989]
Length = 337
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 17/291 (5%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+ DR++ I L + Y+ P + H PDY+ +
Sbjct: 13 DPG-----SRHPESPDRLRAIRRALAKRHGVEYVE---ADPIDESAARAAHDPDYVQKFR 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG--HGKIAYALVRPPGHHAQ 157
E +GG TV +W AAL + G + A + LDG + +AL RPPGHHA
Sbjct: 65 EFCASGGGQWDPDTVAVEATWDAALRSAGQAVWAAEAALDGASERETPFALGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
A G+CFLNNA +A + ++ G +V +ID DVH+GNGT + F V S+H
Sbjct: 125 ADDAMGFCFLNNAAIAAEAMIDDGRAERVAIIDWDVHHGNGTQDIFEDRGDVFYASIHER 184
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
+P G E+G G+G G N+ P+G GD YV A+ E++ P + F+P+++
Sbjct: 185 -----GLYPGTGEAGEIGTGDGEGTTANLAFPSGAGDPAYVAAVDEVLAPLLDDFDPDLL 239
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
++ G D+ DP R ++ +GY + +R LA R G V EGGY
Sbjct: 240 LVSAGFDAHEHDPISRMSVSTEGYGVLAARLRDLAARSDAG-FGFVLEGGY 289
>gi|336384316|gb|EGO25464.1| hypothetical protein SERLADRAFT_465667 [Serpula lacrymans var.
lacrymans S7.9]
Length = 554
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 10/216 (4%)
Query: 118 GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA 177
G+ AA L+ G + A V G K +A+VRPPGHHA+P G+CF NN +A ++
Sbjct: 23 GTPAAARLSCGGVIEACLAVARGELKKTFAIVRPPGHHAEPDEHMGFCFFNNVAIATRVV 82
Query: 178 -LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP--QNGTVDELG 234
L + K++++D DVH+GNGT FY VL ISLH G +P G++ G
Sbjct: 83 QLLTPMKKILILDWDVHHGNGTQRAFYDDPSVLYISLHRYES--GQFYPCGTFGSMVSCG 140
Query: 235 EGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQ 293
EG G GY++NIP P G D Y+HA ++V+P +F P+++++ G D++ D G
Sbjct: 141 EGPGLGYSVNIPWPEKGMTDADYIHAFQQVVMPIAMEFSPDLVIISAGFDAADGDELGEC 200
Query: 294 CLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+T G+ M ++ SLA GGRL++ EGGY++
Sbjct: 201 HVTPTGFAHMTHMLASLA----GGRLVVALEGGYNM 232
>gi|344292665|ref|XP_003418046.1| PREDICTED: histone deacetylase 6-like [Loxodonta africana]
Length = 1119
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 164/315 (52%), Gaps = 18/315 (5%)
Query: 51 PENSDRIKNIVSIL-KRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA----DKAG 105
PE S+R+ I L + G + IS+ + A+ +L+ H+ +YI+ L+E ++A
Sbjct: 106 PECSERLHAIKEQLTQEGLLDRCISFQAR-SAKKEELMLVHSLEYID-LMETTQYMNEAE 163
Query: 106 GKMVC---DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+++ D L+P S+ A LA G+ L + VL + A++RPPGHHAQ + D
Sbjct: 164 LRILANTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAKVRNGMAVIRPPGHHAQHNLMD 223
Query: 163 GYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
GYC N+ +A + A +V+++D DVH+G GT F + VL S+H HG +
Sbjct: 224 GYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEHGQF 283
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P H + G G G GYN+N+P G D Y+ A +++P +F+P ++++
Sbjct: 284 WP-HLKASNWSATGFGRGQGYNINVPWNQVGMRDADYIAAFLRILLPVALEFQPQLVLVA 342
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G D+ DP G+ T G+ ++ ++ LA GG+L++ EGGY+ A + A+
Sbjct: 343 AGYDALQGDPKGKMAATPAGFAQLTHMLMGLA----GGKLILSLEGGYNYRSLAEGVSAS 398
Query: 340 LEGVLNLPLALLSDP 354
L +L P +L P
Sbjct: 399 LHTLLGDPCPMLESP 413
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 169/346 (48%), Gaps = 43/346 (12%)
Query: 5 PSEPPSP---------AAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSD 55
P EPP P A G+I +D M+NH L+D HPE
Sbjct: 458 PWEPPVPQIMAWPMLCARTGLI---YDRRMMNH---YNLWDN-----------HHPEMPQ 500
Query: 56 RIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------ 109
RI I+ L+ ++ PA +LL+ H+ +YI L + + +
Sbjct: 501 RISRIMCHLEGLGLTERCLTLPARPATDAELLTCHSAEYIARLRATENMKTRELHREGAN 560
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
D + P ++ A LA G ++ VL G A+VRPPGHHA+ A G+CF N+
Sbjct: 561 FDSIYICPSTFTCAQLATGAVCRLVEAVLAGEVLNGTAVVRPPGHHAEWDAACGFCFFNS 620
Query: 170 AGLAVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ 226
+A + A++ +++++D D+H+GNGT F VL +SLH +HG++ P
Sbjct: 621 VAVAARHAQAISGHALRILIVDWDIHHGNGTQHIFEDDPSVLYMSLHRYDHGTFFPM-GN 679
Query: 227 NGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
G ++G+ G G+ +N+ NG GD Y+ A LV+P +F P ++++ G D+
Sbjct: 680 EGASSQIGQAPGVGFTVNVAW-NGPRMGDPDYLAAWHRLVLPIAYEFNPELVLVSAGFDA 738
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
+ DP G ++ +GY + ++ LA+ GR++++ EGGY++T
Sbjct: 739 AQGDPLGGCQVSPEGYAHLTHLLMGLAN----GRIILILEGGYNLT 780
>gi|326483151|gb|EGE07161.1| histone deacetylase hda1 [Trichophyton equinum CBS 127.97]
Length = 796
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 166/342 (48%), Gaps = 30/342 (8%)
Query: 46 VLEKHPENSDRIKNIVSILKR-----------GPISPY-ISWHSGIPAQIPQLLSFHTPD 93
L+ HPE+ R+ I L R GP+ P + A +++ HT +
Sbjct: 166 TLDVHPEDPRRVYYIYRELGRAGLIADGGEFQGPLVPQPLKRIEARDATEAEIMLVHTKE 225
Query: 94 YINELVEADKAGGK-------MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAY 146
+ E V++ K + D N ++ +ALL+ G + K V + K A
Sbjct: 226 HY-EFVKSTKDMSEDELLELEHTRDSIYFNSLTFTSALLSCGGAIETCKAVAEERVKNAI 284
Query: 147 ALVRPPGHHAQPTMADGYCFLNN---AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFY 203
A++RPPGHHA+ G+C NN A A Q L C K++++D DVH+GNG FY
Sbjct: 285 AVIRPPGHHAENNKTMGFCLFNNVSVAARACQHVLGDKCRKIMILDWDVHHGNGVQRMFY 344
Query: 204 RSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMT 261
VL IS+H+ GS+ P + G D GEG G G N+NIP P G GD Y++A
Sbjct: 345 NDPNVLYISIHVYRDGSFYPGGDE-GNWDYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQ 403
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E+V+P +F+P+++++ G D++A D G +T Y M R++ +LA+ G++ +
Sbjct: 404 EVVMPIGYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYSHMTRMLMNLAN----GKVAV 459
Query: 322 VQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEA 363
EGGY+ + A ++ P L+ P A P E
Sbjct: 460 CLEGGYNFRSISKSALAVTRTLMGEPPDRLTAPSASRPAVET 501
>gi|387130394|ref|YP_006293284.1| deacetylase [Methylophaga sp. JAM7]
gi|386271683|gb|AFJ02597.1| deacetylase [Methylophaga sp. JAM7]
Length = 330
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 21/287 (7%)
Query: 45 EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKA 104
++ HPE+ R + + L + ++ + PA++ L + H+ ++ +
Sbjct: 44 QITPDHPESPARYRQVAHTLNALHRANKVTSIAATPAKVRWLSTIHSIEHQASIKRH--- 100
Query: 105 GGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT-MADG 163
P ++ A LA G L+ + V+ K A+ RPPGHHA T +G
Sbjct: 101 -----------APEAYATARLAAGGVLNCVDAVMQEKVKNAFCASRPPGHHATNTGREEG 149
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C+ N+ +A + A G +++++D D H+GNGT FY VL S H
Sbjct: 150 FCYFNHVAIAARYAQQQYGLERILIVDWDYHHGNGTEWAFYDDPSVLFFSTHDR-----D 204
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
++P+ G + G G G G+N+N+ LP G+GD + A E ++PA F P ++++ G
Sbjct: 205 AYPRTGLPERTGHGAGEGFNINVHLPCGSGDAAMLAAFKEKLLPAANAFSPQLVLISAGF 264
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DS D G +T DG++ + ++V +A R+ GRL+ V EGGYH+
Sbjct: 265 DSRVDDLLGCHEITDDGFKALTKMVMQIAARHCQGRLVSVLEGGYHI 311
>gi|119593920|gb|EAW73514.1| histone deacetylase 10, isoform CRA_d [Homo sapiens]
Length = 662
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 163/334 (48%), Gaps = 14/334 (4%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV-- 109
E +R+ + L++ + S A +L H+P+Y++ + E G + +
Sbjct: 26 ERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQA 85
Query: 110 ----CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
D +P ++ A LA G L + VL G + ALVRPPGHH Q A+G+C
Sbjct: 86 LSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFC 145
Query: 166 FLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPS 223
NN +A A G +++V+D DVH+G G F VL S H HG + P
Sbjct: 146 VFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWP- 204
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+ D +G G+G G+ +N+P G G+ YV A L++P +F+P ++++ G
Sbjct: 205 FLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGF 264
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
DS+ DP G+ T + + + ++++ LA GGR+ V EGGYH+ A + T++
Sbjct: 265 DSAIGDPEGQMQATPECFAHLTQLLQVLA----GGRVCAVLEGGYHLESLAESVCMTVQT 320
Query: 343 VLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
+L P LS P+A E ++ I+S + Q
Sbjct: 321 LLGDPAPPLSGPMAPCQRCEGSALESIQSARAAQ 354
>gi|425447723|ref|ZP_18827706.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389731639|emb|CCI04318.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 305
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVGALKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H DY++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPIEIRDEVIPLIKQVHNQDYVDILRRICQRGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPL
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEAREKGE---FNNVLNIPLSA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLETLAASVVATLEALL 305
>gi|302850072|ref|XP_002956564.1| hypothetical protein VOLCADRAFT_97594 [Volvox carteri f. nagariensis]
gi|300258091|gb|EFJ42331.1| hypothetical protein VOLCADRAFT_97594 [Volvox carteri f. nagariensis]
Length = 1124
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 140/259 (54%), Gaps = 10/259 (3%)
Query: 90 HTPDYINELVEA---DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAY 146
H PDYI + E D G D +PG + A LA G + A++ VL G + AY
Sbjct: 799 HCPDYIRRVREMSADDTKGHHTAGDVATFSPGGYRIAALAAGGAIEAVEAVLRGEVRNAY 858
Query: 147 ALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRS 205
ALVRPPGHHA+ G+C NN +A AL+ G +V ++D DVH+GNGT F
Sbjct: 859 ALVRPPGHHAERDQGMGFCIFNNVAVAAAHALSVRGLRRVAIVDFDVHHGNGTQHMFESD 918
Query: 206 NKVLTISLHMNHGSWGPSHP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
+V+ ISLH + ++P ++G + E G G+G G LN+PLP G+G Y A T LV
Sbjct: 919 PRVMFISLHQD-----SNYPLRSGYMTENGVGQGEGTTLNVPLPPGSGSGAYQAAFTRLV 973
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
PA++ F+P ++++ G D+S D L+ + M R + A+ GGRL+ + E
Sbjct: 974 RPALEIFKPELLLVSAGYDASYMDNLAAMILSSADFGWMMRQLVEAAESLCGGRLVALHE 1033
Query: 325 GGYHVTYSAYCLHATLEGV 343
GGY Y +C A LE +
Sbjct: 1034 GGYSELYVPFCGLAALEAL 1052
>gi|403174834|ref|XP_003333752.2| hypothetical protein PGTG_15512 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171338|gb|EFP89333.2| hypothetical protein PGTG_15512 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 720
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 181/386 (46%), Gaps = 36/386 (9%)
Query: 8 PPS-----PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVS 62
PPS P+ GI + ML H FDT D + + PE RI I++
Sbjct: 18 PPSTSLSRPSRTGICH---SQQMLKHWKPDVQFDTIKDQ---DDENEEPERPSRIARIIA 71
Query: 63 ILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTV-------- 114
+ + ++ + A +++ H+ + + E + + D +
Sbjct: 72 HVSKQKLTDNLEHIKIRKATKEEIMLVHSEGHWKRIEETATMSLQDLKDRSAYFTRLSLY 131
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+N ++ A L+ G + + V+DG K +A+VRPPGHH++P G+C NNA ++
Sbjct: 132 VNGDTFDCARLSCGGVIEMCRAVMDGKIKNGFAVVRPPGHHSEPEDPSGFCVFNNAAISA 191
Query: 175 QLALN---SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM----NHGSWGPSHPQN 227
+ KV+++D DVH+GNG FY + VL IS+H N +
Sbjct: 192 KWLRTVYPDKVKKVLLVDWDVHHGNGIQRSFYYDSSVLYISIHRFLQENRSEYFYPGTDW 251
Query: 228 GTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G + +G+G+G G+N+NIP P G D Y++A LV+P +F+P+ +++ G D++
Sbjct: 252 GGSNRVGDGDGQGFNVNIPWPEGGMCDADYIYAFQRLVMPIAMEFDPDFVIVSAGFDAAK 311
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY----CLHATL-E 341
DP G +T +G+ M ++ SLA G+ ++ EGGYH+ A C+ + E
Sbjct: 312 NDPLGECNVTPEGFAHMTHMLTSLA----SGKTVLALEGGYHLESLALSATECIKVLMGE 367
Query: 342 GVLNLPLALLSDPIAYYPEDEAFPVK 367
L A+++ +A DE ++
Sbjct: 368 APPKLGCAMVASDVATETVDECLKIQ 393
>gi|409044909|gb|EKM54390.1| hypothetical protein PHACADRAFT_196818 [Phanerochaete carnosa
HHB-10118-sp]
Length = 669
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 154/292 (52%), Gaps = 22/292 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIP---AQIPQLLSFHTPDYINELVEADKAGG 106
HPE +RIK I + + IS IP A+ ++L H+ ++++
Sbjct: 59 HPEQPERIKRIFDAFRDAGL---ISKMRKIPIREAERDEVLMVHSETLWDKVMAVGDMST 115
Query: 107 KMVCDGT--------VLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQP 158
+ + D ++P + AA L+ G + ++ G + A+A+VRPPGHH++P
Sbjct: 116 QDIVDSEQYYQDLSLYVSPSTPEAARLSCGGVIEVAMAIVRGDVEKAFAIVRPPGHHSEP 175
Query: 159 TMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-N 216
G+CF NN +A++ + + K++++D DVH+GNGT + FY VL +SLH
Sbjct: 176 DEHMGFCFFNNVAVAIKVIQMWPAFKKIMILDWDVHHGNGTQKAFYDDPDVLYVSLHRYE 235
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNM 275
+G + P+ P G++ G+G G G ++NIP P G GD Y++A +V+P +F P++
Sbjct: 236 NGQFYPNGP-FGSLKSCGDGPGLGCSVNIPWPTKGMGDADYIYAFQRIVMPIAMEFAPDL 294
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+++ G D++ D G +T GY M ++ LA G++L+ EGGY
Sbjct: 295 VIISAGFDAAKGDDLGECEVTPAGYAHMTHMLAGLAR----GKMLVALEGGY 342
>gi|166998691|ref|ZP_02264545.1| histone deacetylase family protein [Burkholderia mallei PRL-20]
gi|243065047|gb|EES47233.1| histone deacetylase family protein [Burkholderia mallei PRL-20]
Length = 371
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 150/298 (50%), Gaps = 3/298 (1%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
+ E+ D + ++S++ ++ + S A L H Y++ A AGG +
Sbjct: 38 YAESPDSKRRLLSLVHASGLAAKLDMSSAPAAADDDLRRIHPAHYLDAFKRASDAGGGDL 97
Query: 110 CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNN 169
+ GS+ A L+ G L+A+ VL A++L RPPGHH G+C L N
Sbjct: 98 GELAPFGRGSYEIAALSAGLALAAVDAVLAERTANAFSLSRPPGHHCLRDKPMGFCLLAN 157
Query: 170 AGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
+A++ A +V VID DVH+GNGT +Y LTISLH + + P +
Sbjct: 158 IPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDR-CFPPGY-SGA 215
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
G G G G N+N+PL G GD Y +A +V+PA+ F P ++++ G D++A D
Sbjct: 216 DERGAGAGAGAGANVNVPLLAGAGDDAYRYAFERIVLPALDAFRPELVIVASGLDANAVD 275
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P R L D YR M ++ A R+ GGRL+IV EGGY Y +C HA +E + +
Sbjct: 276 PLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYSEAYVPFCGHAIVEALAGM 333
>gi|398825781|ref|ZP_10584057.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. YR681]
gi|398222547|gb|EJN08918.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. YR681]
Length = 341
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 155/318 (48%), Gaps = 49/318 (15%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA 101
G ++ + PE +DR+ + K + P ++ G A+I H+P+Y++ L EA
Sbjct: 21 GVVKRTTEQPERADRLLKGLKDGKHQLVEP-TTFGQGPRARI------HSPEYLSFLSEA 73
Query: 102 --------------------------------DKAGGKMVCDGTVLNPGSWGAALLAVGT 129
K G + PG+W AA A
Sbjct: 74 WDAWTALGDSGPEMIGNIHPVRHAATYPTHIVGKLGWHTADTAAPIGPGTWAAACAATDV 133
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
+A + V+DG + YAL RPPGHHA MA G+CFLNN+ +A L +VV++D
Sbjct: 134 ATTAAQMVMDGEDAV-YALCRPPGHHAYRDMAGGFCFLNNSAIAAA-HLRLKHERVVILD 191
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
+DVH+GNGT FY V T+S+H + ++ P G E GEG G G NLNIPL
Sbjct: 192 VDVHHGNGTQGIFYARPDVYTVSIHADPVAYYPY--VWGYAHERGEGPGLGANLNIPLAI 249
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
GTGD GY+ AM ++ AI+ F P +V+ +G D+S DP +T G+R +G+ +
Sbjct: 250 GTGDDGYIQAM-DVARKAIESFAPGALVIALGLDASEHDPLKGLAVTTPGFRRIGQAIAK 308
Query: 310 LADRYSGGRLLIVQEGGY 327
L G + VQEGGY
Sbjct: 309 L-----GLPTVFVQEGGY 321
>gi|428175094|gb|EKX43986.1| hypothetical protein GUITHDRAFT_157988 [Guillardia theta CCMP2712]
Length = 307
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 143/288 (49%), Gaps = 12/288 (4%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
+ HPE RI + L I+ + G ++L H+ + ++ + +
Sbjct: 10 DHHPERPHRIAAMYQHLLDAGIARRCTQIKGRECTEEEVLMVHSLQHWQQVHTSSAGVAR 69
Query: 108 MVCD----GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
C T N S A +A GT + VL G ALVRPPGHHA+ G
Sbjct: 70 GCCTQIGADTYCNEFSALCARMATGTVAEVCRRVLRGEAANGAALVRPPGHHAEHETIMG 129
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+CF N +A ++A G +V+++D DVH+GNGT F++ VL ISLH G
Sbjct: 130 FCFFNYVAVAAEIAKREFGLQRVLILDWDVHHGNGTQSMFFKDPSVLYISLHRYED--GN 187
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
+P G E+G G G G+N+NIP P + GD Y+ A +V+P + F P ++++ G
Sbjct: 188 FYPGTGGAHEVGVGAGRGFNINIPWPHDEVGDAEYLMAFESIVMPVARSFNPELVLVSAG 247
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
D++ DP G +T GY M ++R LA GG++++ EGGY++
Sbjct: 248 FDAADGDPLGGCSVTPYGYAMMTNMLRGLA----GGKVVVALEGGYNL 291
>gi|119593921|gb|EAW73515.1| histone deacetylase 10, isoform CRA_e [Homo sapiens]
Length = 673
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 163/334 (48%), Gaps = 14/334 (4%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV-- 109
E +R+ + L++ + S A +L H+P+Y++ + E G + +
Sbjct: 26 ERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQA 85
Query: 110 ----CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
D +P ++ A LA G L + VL G + ALVRPPGHH Q A+G+C
Sbjct: 86 LSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFC 145
Query: 166 FLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPS 223
NN +A A G +++V+D DVH+G G F VL S H HG + P
Sbjct: 146 VFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWP- 204
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+ D +G G+G G+ +N+P G G+ YV A L++P +F+P ++++ G
Sbjct: 205 FLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGF 264
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
DS+ DP G+ T + + + ++++ LA GGR+ V EGGYH+ A + T++
Sbjct: 265 DSAIGDPEGQMQATPECFAHLTQLLQVLA----GGRVCAVLEGGYHLESLAESVCMTVQT 320
Query: 343 VLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQ 376
+L P LS P+A E ++ I+S + Q
Sbjct: 321 LLGDPAPPLSGPMAPCQRCEGSALESIQSARAAQ 354
>gi|15679205|ref|NP_276322.1| acetylpolyamine aminohydolase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3024979|sp|O27262.1|Y1194_METTH RecName: Full=Uncharacterized protein MTH_1194
gi|2622302|gb|AAB85683.1| acetylpolyamine aminohydolase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 331
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 150/283 (53%), Gaps = 17/283 (6%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL-VEADKAGG 106
E H ENS R + I+ ++ +SP G+ A I +L H+ ++ L V A + GG
Sbjct: 15 EGHVENSGRTRAILRAIESSDLSPRFV-EPGM-AGIDDILMVHSSTHVEYLEVFAGRGGG 72
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL-DGHGKIAYALVRPPGHHAQPTMADGYC 165
+ D T + P S+ A L+ G + A + L DG +Y+L RPPGHHA + G+C
Sbjct: 73 WLDYD-TYMTPESFSVARLSAGGAMLAAEEALRDG---WSYSLGRPPGHHATYDRSMGFC 128
Query: 166 FLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
NN +A++ A N G + +V+D DVH+GNGT+ FYR V+ IS+H + +
Sbjct: 129 IFNNIAIAIEHARRNLGVSRPLVLDFDVHHGNGTSSIFYRDRDVMYISIHQDPRTL---F 185
Query: 225 PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
P G +DE G GEG G+NLNIP+P G+G+R Y+ + ++ ++ F P+MI + G D+
Sbjct: 186 PGTGFIDETGSGEGEGFNLNIPMPRGSGNREYLWILGMILPAVLEGFRPDMIFVSAGFDA 245
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP + + + +G + +G V EGGY
Sbjct: 246 HRRDPLAEIMVDEEFFSWIGWFIHQ-----TGLPCTAVLEGGY 283
>gi|344250000|gb|EGW06104.1| Histone deacetylase 6 [Cricetulus griseus]
Length = 666
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 176/358 (49%), Gaps = 34/358 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D+ M++H L+D HPE RI I+ L+ ++
Sbjct: 5 PVLQDRTGLVYDEKMMSH---CNLWDN-----------HHPETPQRILRIMCHLEEVGLT 50
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y++ + +K + + D + P ++ A
Sbjct: 51 ARCLILPVRPAMDAELLACHSAEYVDRVRATEKMKTRELHREGANFDSIYICPSTFACAQ 110
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ--LALNSGC 182
LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A+
Sbjct: 111 LATGAACCLVEAVLSGQVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQAIAGRA 170
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +S+H +HG++ P + G ++G G G+
Sbjct: 171 LRILIVDWDVHHGNGTQHMFEDDPSVLYVSVHRYDHGTFFPMGDE-GASSQVGRAAGIGF 229
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+P NG GD Y+ A LV+P +F P ++++ G D++ DP G +T +G
Sbjct: 230 TVNVPW-NGPRMGDADYLTAWHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVTPEG 288
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP---LALLSDP 354
Y + ++ LA+ GR++++ EGGY++ + + A +L P L LL P
Sbjct: 289 YAHLTHLLMGLAN----GRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 342
>gi|456063798|ref|YP_007502768.1| histone deacetylase superfamily protein [beta proteobacterium CB]
gi|455441095|gb|AGG34033.1| histone deacetylase superfamily protein [beta proteobacterium CB]
Length = 306
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 16/294 (5%)
Query: 41 PGFL--EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
P FL E+ HPE +RI+ I L R I ++ A QL H+PD+I +
Sbjct: 9 PDFLKHEMGSHHPECPERIQAINDQLIRSGIDRFLHHLDAPLATEDQLELVHSPDHIAFV 68
Query: 99 VEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
E A G + DG T++NP +W AAL A G ++ + V+ G + + +RPPGHHA+
Sbjct: 69 KERSPASGYFMLDGDTIMNPHTWSAALRAAGAAIAGVDAVMKGEVENVFCAIRPPGHHAE 128
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
PT + G+C +N +A + A+ + +V +ID DVH+GNGT F+ VL S +
Sbjct: 129 PTRSMGFCVFDNVAVAARYAMETYDIERVAIIDFDVHHGNGTEAAFFNDPNVLMCSFFQH 188
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
P +P +G +G +N+PLP T + E +P ++ FEP +I
Sbjct: 189 -----PFYPYSGL-------DGANNMVNVPLPASTRGDVVRSIVEEQWLPRLRDFEPELI 236
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
++ G D+ D G+ L D Y + + ++ +A +YS GR++ EGGY+++
Sbjct: 237 IISAGFDAHREDDLGQMGLVEDDYAWITKQLKGVASQYSQGRIVSCLEGGYNLS 290
>gi|86748777|ref|YP_485273.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
HaA2]
gi|86571805|gb|ABD06362.1| Histone deacetylase superfamily [Rhodopseudomonas palustris HaA2]
Length = 341
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 117/218 (53%), Gaps = 20/218 (9%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+ PG+W A A SA + V+DG AYAL RPPGHHA +A G+CFLNN+ +A
Sbjct: 119 IGPGTWAAVCAATDVATSAAQLVMDGE-DAAYALCRPPGHHAYRDLASGFCFLNNSAIAA 177
Query: 175 QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-----MNHGSWGPSHPQNGT 229
L +V ++D+DVH+GNGT FY VLT+S+H N WG +H
Sbjct: 178 A-HLRLKHERVAILDVDVHHGNGTQGIFYERPDVLTVSIHADPTFFNPFVWGYAH----- 231
Query: 230 VDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDP 289
E G G G G NLNIPL GT D GY+ A+ + I+ F P +V+ +G D+S DP
Sbjct: 232 --ERGAGPGLGANLNIPLAKGTDDDGYIEALG-VAEKTIRAFAPGALVVALGLDASEHDP 288
Query: 290 NGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
+T DG+ +G + L G + VQEGGY
Sbjct: 289 LAGLAVTTDGFHRIGGAIARL-----GLPTVFVQEGGY 321
>gi|336371557|gb|EGN99896.1| hypothetical protein SERLA73DRAFT_180181 [Serpula lacrymans var.
lacrymans S7.3]
Length = 375
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 124/215 (57%), Gaps = 8/215 (3%)
Query: 118 GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA 177
G+ AA L+ G + A V G K +A+VRPPGHHA+P G+CF NN +A ++
Sbjct: 23 GTPAAARLSCGGVIEACLAVARGELKKTFAIVRPPGHHAEPDEHMGFCFFNNVAIATRVV 82
Query: 178 -LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGE 235
L + K++++D DVH+GNGT FY VL ISLH G + P G++ GE
Sbjct: 83 QLLTPMKKILILDWDVHHGNGTQRAFYDDPSVLYISLHRYESGQFYPCG-TFGSMVSCGE 141
Query: 236 GEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
G G GY++NIP P G D Y+HA ++V+P +F P+++++ G D++ D G
Sbjct: 142 GPGLGYSVNIPWPEKGMTDADYIHAFQQVVMPIAMEFSPDLVIISAGFDAADGDELGECH 201
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+T G+ M ++ SLA GGRL++ EGGY++
Sbjct: 202 VTPTGFAHMTHMLASLA----GGRLVVALEGGYNM 232
>gi|337269227|ref|YP_004613282.1| histone deacetylase superfamily protein [Mesorhizobium
opportunistum WSM2075]
gi|336029537|gb|AEH89188.1| histone deacetylase superfamily [Mesorhizobium opportunistum
WSM2075]
Length = 342
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 126/225 (56%), Gaps = 10/225 (4%)
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+AG M ++ +W +AL + + + A + V+ G AYAL RPPGHHA +A
Sbjct: 107 QAGYHMADTACPISGETWQSALWSAWSAVEAAETVMAG-APAAYALCRPPGHHAFADVAG 165
Query: 163 GYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
G+CF+NN+ +A Q+ L +V ++D+D+H+GNGT FY VLT+SLH + + P
Sbjct: 166 GFCFINNSAVAAQV-LRRNAARVAILDVDLHHGNGTQGIFYARPDVLTVSLHADPVRFYP 224
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
G DE GEG G GYN N+PLP + D ++ A+ E+ I+ F P+ +V+ +G
Sbjct: 225 FF--WGHADERGEGPGLGYNFNLPLPRKSADAAFLEAL-EVAFQRIRAFSPDALVVALGL 281
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP G +T G+ +G + L G +IVQEGGY
Sbjct: 282 DAFEGDPFGGLSVTTPGFSRIGEAIAGL-----GLPSVIVQEGGY 321
>gi|169597003|ref|XP_001791925.1| hypothetical protein SNOG_01279 [Phaeosphaeria nodorum SN15]
gi|160707422|gb|EAT90928.2| hypothetical protein SNOG_01279 [Phaeosphaeria nodorum SN15]
Length = 525
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 146/270 (54%), Gaps = 15/270 (5%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D N ++ A LA G + A K V+ G + A A+VRPPGHHA+ G+C NN
Sbjct: 14 DSIYFNQATFECAKLAAGGAIEACKAVVQGSVRNAIAIVRPPGHHAESNQPSGFCIFNNV 73
Query: 171 GLAV---QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNH-GSWGPSHPQ 226
+A Q A C KV+++D DVH+GNG FY VL ISLH+ G++ P+ P
Sbjct: 74 PIATRVCQEAYPETCRKVMILDWDVHHGNGIQHAFYNDPNVLYISLHVFRGGNFYPNLP- 132
Query: 227 NGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
+G +D GEG G G N+NIP + G GD Y++A E+V+P +F+P+++++ G D++
Sbjct: 133 DGDLDYSGEGPGEGKNVNIPWADHGMGDAEYLYAFQEVVMPIATEFDPDLVIISAGFDAA 192
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV-TYSAYCLHATLEGVL 344
D G +T Y M ++ LA G+L++ EGGY++ + + L T +L
Sbjct: 193 EGDILGGCFVTPAAYGHMTHMLMRLA----RGKLVVCLEGGYNLRSIARSALAVTRVLML 248
Query: 345 NLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
P L D A P+D A V IE +K+
Sbjct: 249 EPPDRLQEDMPA--PKDSA--VYTIEQVKR 274
>gi|387126712|ref|YP_006295317.1| acetylspermidine deacetylase [Methylophaga sp. JAM1]
gi|386273774|gb|AFI83672.1| Acetylspermidine deacetylase [Methylophaga sp. JAM1]
Length = 329
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 153/299 (51%), Gaps = 23/299 (7%)
Query: 39 FDPGFL--EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN 96
DPGF ++ +HPE+ R K + L+ + ++ +LL H+ +++
Sbjct: 32 LDPGFANHHIMPQHPESPARYKRLRDELEVSELLSKVTLLKPKSKIESELLLIHSANHVA 91
Query: 97 ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA 156
+ D P + AA+LA G L A+ V G A+ RPPGHHA
Sbjct: 92 SIKRHD--------------PDAHQAAMLATGGVLVAVDAVCKGLLDNAFCASRPPGHHA 137
Query: 157 QPT-MADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
T +G+C+ N+ +A + A G +++++D D H+GNGT FY VL S H
Sbjct: 138 TNTGKEEGFCYYNHVAIAARYAQKRYGLKRILIVDWDYHHGNGTEWAFYHDASVLFFSTH 197
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
++P G+ ++ G G G G+N+N+ LP G+GD + A E ++PA+ +F+P+
Sbjct: 198 D-----AEAYPGTGSPEKTGTGSGKGFNINVHLPCGSGDAEIISAFEEKLIPAVTEFKPD 252
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+I++ G DS D G ++ G+ ++ I+ LA ++ G+L+ V EGGY++T +A
Sbjct: 253 LILISAGFDSREEDLLGCYKVSDQGFIQLTEIMLRLAKQHCDGKLVSVLEGGYNLTGNA 311
>gi|327273189|ref|XP_003221363.1| PREDICTED: histone deacetylase 10-like [Anolis carolinensis]
Length = 594
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 174/350 (49%), Gaps = 32/350 (9%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDP-GFLEVLEKHPENSDRIK--NIVSILKRGPISPYISW 75
+ +DD M NH K ++D DP +EV E+ ++++ N++ P+
Sbjct: 7 LIYDDEMRNH---KLIWD---DPICEIEVPERLSSCYEQLQGYNLIERCTSVPVRE---- 56
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGT 129
A +++ H+ DY+ + +K + + D +P ++ A LA G
Sbjct: 57 -----ATEDEIMLVHSSDYLEIVKSTEKMKQEELRKISADFDAVYFHPTTYLCAKLAAGA 111
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVI 188
TL + V+ G + ALVRPPGHH+Q A+G+C NN +A + A G +++++
Sbjct: 112 TLELVDAVMLGRTRNGMALVRPPGHHSQRNAANGFCIFNNVAIAAKYAQKKYGLERILIV 171
Query: 189 DIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
D DVH+G G F VL S H H + PS ++ D +G+G+G G+N+N+P
Sbjct: 172 DWDVHHGQGIQYIFDEDPSVLYFSWHRFEHQQFWPSLKESD-YDAVGQGKGKGFNINVPW 230
Query: 248 PN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
G G+ YV +++P + +F+P ++++ G DS DP G+ C T + + +
Sbjct: 231 NKVGMGNADYVAVFLHVLLPLVFEFDPELVLVSAGFDSGIGDPEGQMCATPECFAHLTHF 290
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
+ LA G+L +V EGGYH+ + + T++ +L PL LS +A
Sbjct: 291 LMHLAK----GKLCLVLEGGYHLRSLSESVCMTIKTLLGDPLPRLSGEMA 336
>gi|388471122|ref|ZP_10145331.1| acetylpolyamine aminohydrolase [Pseudomonas synxantha BG33R]
gi|388007819|gb|EIK69085.1| acetylpolyamine aminohydrolase [Pseudomonas synxantha BG33R]
Length = 345
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 132/226 (58%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++A K +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPIGELTWRSAYWSAQSAVAAAKAILDG-APAAYALCRPPGHHARFDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q AL G +V V+D D+H+G G E FY+ + VL S+H + ++ P
Sbjct: 166 FCYINNAAVAAQ-ALRQGFQRVAVLDTDMHHGQGIQEIFYQRDDVLYTSIHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G +E G+G G G+NLN+P+P+G + + + EL + A++ F +++VL +G D
Sbjct: 225 --VAGFAEEKGDGPGLGFNLNLPMPHGASEALFFEKL-ELALAAVKDFSADVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +R L G LIVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTREGFARLGECIRGL-----GLPCLIVQEGGYHL 322
>gi|324503375|gb|ADY41470.1| Histone deacetylase 6 [Ascaris suum]
Length = 847
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 171/335 (51%), Gaps = 15/335 (4%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L +D L D +E E+ + R+++ + + + P + + + + Q
Sbjct: 420 LAYDPRVELHREEIDMAHVERPERTSMIAKRLRDTGLLRRCAILQPREATYDELRL-VHQ 478
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI- 144
L + I E+ E+++ + + S+ A++ AVG+ L + VLD K
Sbjct: 479 LAHIKHMEAIAEVDESERRREEDHSNSMYFCKESFRASIAAVGSILECVDAVLDEERKER 538
Query: 145 ---AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
A+AL+RPPGHHA P+ A G+C NN +A + A+ G +++++D DVH+GNG E
Sbjct: 539 ARNAFALIRPPGHHATPSQAAGFCIFNNVAIAAKYAMEKYGLERILIVDWDVHHGNGIQE 598
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQN--GTVDELGEGEGFGYNLNIPLPNGT-GDRGYV 257
FY VL ISLH + G +P N V++ GEG G GY++NIP +G D Y
Sbjct: 599 IFYSDPHVLYISLHRHDD--GLFYPANEPKDVEDGGEGAGLGYSINIPFSHGRMSDNDYR 656
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
A T++V+P ++ P ++++ G D++ D G L+ Y ++ + +LA G
Sbjct: 657 MAFTKVVMPIAYEYSPQLVIVSSGFDAAYGDILGGYELSAQCYAQLTYQLGALAK----G 712
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLS 352
R+++ EGGY +T C A ++ +L+ L L+S
Sbjct: 713 RIIVALEGGYSLTVLQDCAEAVVKTLLDRCLPLVS 747
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 141/304 (46%), Gaps = 18/304 (5%)
Query: 52 ENSDRIKNIVSILKRGPI---SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
E RI++IV+ LK+ I I H P L H +Y+ + E K
Sbjct: 29 EGPSRIESIVAHLKQSGIWNQCNIIQEH--FPIDEGDLRETHDQNYVRCVAELRNKSKKA 86
Query: 109 V------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+ D L G++ AA AV T + + +AL+RPPGHHAQ A+
Sbjct: 87 LDELANKFDSVYLCQGTYEAACEAVACTRNMAALIAKRKIPNGFALIRPPGHHAQRNAAN 146
Query: 163 GYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
G+C NN A + A N G +++++D DVH+G G + FY +V+ S+H G +
Sbjct: 147 GFCVFNNVAQAAEEAYNFGEDRILIVDFDVHHGQGVQQSFYEEKRVMYCSIHRYEDGKFW 206
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P H D +G G GYN+NIPL G GD Y+ ++ P + P+ +V+
Sbjct: 207 P-HLAESNFDHIGVSSGVGYNINIPLNELGCGDADYMAIFWNVIWPIASTYRPHFVVVAA 265
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D+ DP G ++ D + ++ LA GG++L+ E GY+ A C+ +
Sbjct: 266 GYDACQGDPIGAMDVSPDLFAHFVYHLKGLA----GGKILLCLEDGYNERNVALCVERCI 321
Query: 341 EGVL 344
+L
Sbjct: 322 RILL 325
>gi|237746704|ref|ZP_04577184.1| deacetylase [Oxalobacter formigenes HOxBLS]
gi|229378055|gb|EEO28146.1| deacetylase [Oxalobacter formigenes HOxBLS]
Length = 311
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 12/282 (4%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE DR+ + L P I W QLL HTP+Y+ + G +
Sbjct: 20 EHPECPDRLIAVRDALTT-PEFESIPWRHAPLGTKEQLLLVHTPEYVRRIETIRPKVGYV 78
Query: 109 VCDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
DG T+++PG+W + VG + V+ G + RP GHHA+P A G+C
Sbjct: 79 PLDGGDTIMSPGTWDCVMSCVGAACLGVDMVMKGEADNVFCATRPCGHHAEPDRAMGFCV 138
Query: 167 LNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
N+A + A + +V ++D DVH+GNGT + FY ++ S H + P +P
Sbjct: 139 FNHAAIGAAYAYDKYKLDRVAIVDFDVHHGNGTQDAFYHRPEIFYASCHQS-----PFYP 193
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
+G E G +N+PL G G + + M+ ++PA++KF P+++++ G D+
Sbjct: 194 GSGARYETGIDHNV---VNVPLSRGAGSDKFRNCMSFEILPALKKFNPSILIISAGFDAH 250
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G T D + + + + +AD G+++ + EGGY
Sbjct: 251 RKDPLGGLSFTDDDFYWVTKELMKVADECCDGKIVSILEGGY 292
>gi|307941535|ref|ZP_07656890.1| type-2 histone deacetylase 1 [Roseibium sp. TrichSKD4]
gi|307775143|gb|EFO34349.1| type-2 histone deacetylase 1 [Roseibium sp. TrichSKD4]
Length = 309
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 143/291 (49%), Gaps = 13/291 (4%)
Query: 41 PGFLEVLEK--HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
P +L+ L HPE DR++ + IL+ P + I +I + H YI++L
Sbjct: 9 PSYLDHLTPVGHPERPDRLRAVDRILEHEKFQPLERDIAQI-GRIEDIARAHPMSYIDDL 67
Query: 99 VE-ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
A + G V T L+PGSW A L G A+ V+ A++ RPPGHHA+
Sbjct: 68 HNLAPEEGLARVDADTTLSPGSWEAILRGTGAACQAVDEVVSKKVNNAFSASRPPGHHAE 127
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
+ G+CF NNA +A + A N G +V +ID DVH+GNGT + F+ V+ S H
Sbjct: 128 KDRSMGFCFFNNAAVAARYAQNVYGLDRVAIIDFDVHHGNGTQDIFWNDPTVMYCSTHQM 187
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
P +P +G +E GE +N PL G + AM +++P ++ F P ++
Sbjct: 188 -----PLYPGSGAANETGEANTI---VNAPLSAGDDGTIFKEAMETVILPRLETFSPELV 239
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
++ G D+ DP G L + R + +AD+ GR++ + EGGY
Sbjct: 240 IISAGFDAHYRDPLGGLNLVEADFAWATRALMDIADKSCDGRVVSLLEGGY 290
>gi|296192102|ref|XP_002743921.1| PREDICTED: histone deacetylase 10 [Callithrix jacchus]
Length = 811
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 168/342 (49%), Gaps = 21/342 (6%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV-- 109
E +R+ + L++ + S A +L H+P+Y++ + E G + +
Sbjct: 26 ERPERLTAALDRLRKCGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQA 85
Query: 110 ----CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
D +P ++ A LAVG L + VL G + +ALVRPPGHH+Q A+G+C
Sbjct: 86 LSGQFDAIYFHPSTFHCARLAVGAALQLVDAVLTGVVQNGFALVRPPGHHSQRAAANGFC 145
Query: 166 FLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPS 223
NN +A A G +++++D DVH+G G F VL S H HG + P
Sbjct: 146 VFNNVAIAAAHAKQKHGLHRILIVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWP- 204
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+ D +G G+G G+ +N+P G G+ YV A L++P +F+P ++++ G
Sbjct: 205 FLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGF 264
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
DS+ DP G+ T + + + ++++ LA GGR+ + EGGYH+ A + T++
Sbjct: 265 DSAIGDPEGQMQATPECFAHLTQLLQVLA----GGRVCAMLEGGYHLESLAESVCMTVQT 320
Query: 343 VLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
+L P LS P+ P A +ESI+ + P+ K
Sbjct: 321 LLGDPAPPLSGPMV--PCQSA-----LESIQSVRATQAPYWK 355
>gi|448354802|ref|ZP_21543557.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
gi|445637133|gb|ELY90289.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
Length = 344
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 149/302 (49%), Gaps = 17/302 (5%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE+ DR++ I LK+ Y+ P I + + H YI+ + E + GG
Sbjct: 17 RHPESPDRLRAIRERLKKKHGVEYVE---ADPCPIEDIAAVHDRAYIDSVKEFCEDGGGN 73
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCF 166
T +W A + G A+ L G K +A+ RPPGHHA P A G+CF
Sbjct: 74 WDPDTTAVEATWDAICASAGQACWAVDAALAGDSGRKTPFAIGRPPGHHAVPDDAMGFCF 133
Query: 167 LNNAGLAVQLALNSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
NN +A Q AL+ +V + D DVH+GNGT + F + V +S+H
Sbjct: 134 ANNVAIAAQHALDHDEYDVDRVAIFDWDVHHGNGTQDIFDDGDDVFFVSIHEQG-----L 188
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G V+E G G+G G +NIP+P GT D GY+ A V A++ F+P+++++ G D
Sbjct: 189 YPGTGDVEETGTGDGAGTTMNIPMPAGTSDAGYLAAFDGPVATALESFDPDLLLISAGFD 248
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHATL 340
+ DP R L+ + Y + VR+LA G L V EGGY + S +H T
Sbjct: 249 AHRHDPISRIRLSTEAYALLTDRVRTLAGEL-GAPLAFVLEGGYGLDVLADSVSIVHETF 307
Query: 341 EG 342
+G
Sbjct: 308 DG 309
>gi|398883517|ref|ZP_10638471.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM60]
gi|398196509|gb|EJM83511.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM60]
Length = 341
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGEQTWRSAYWSAQSAVAGAQALLDGE-PAAYALCRPPGHHARAEAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q+ L G +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYVNNAAVAAQV-LRGGFERVAVLDTDMHHGQGIQEIFYDRDDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G GYNLN+P+ +G+ + ++ E+ + A++ F ++VL +G D
Sbjct: 225 --VAGFADERGAGAGEGYNLNLPMAHGSSEADFL-GQLEVALAAVKDFAAEVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +RSL G LIVQEGGYH+
Sbjct: 282 IFELDPQSKVAVTREGFARLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|398821068|ref|ZP_10579558.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. YR681]
gi|398228265|gb|EJN14397.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. YR681]
Length = 309
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ + L Y+ + + H Y+ EL G++
Sbjct: 20 HPERPDRLRAVEEALSVERFQ-YLVRDQAPEGDLDLVTLCHNEHYVTELRHIAPTSGQVY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A + V++G + A+ VRPPGHHA+ G+CF +
Sbjct: 79 VDGDTSMSPGTWEAVMRGVGGAVAATEAVMNGEHRNAFVAVRPPGHHAEIGKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A G +V ++D DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NVAIAARHAQRKYGIKRVAIVDFDVHHGNGTQDIFWSDPTVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL + G + A L++P ++KF P ++V+ G D+
Sbjct: 194 GAKGERGDHDTI---VNAPLASEDGGPEFRSAFENLILPQLEKFSPELLVISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + Y + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDYTWVTRKLMDLADKSAGGRVVSVLEGGY 290
>gi|294656174|ref|XP_458424.2| DEHA2C16918p [Debaryomyces hansenii CBS767]
gi|199430917|emb|CAG86506.2| DEHA2C16918p [Debaryomyces hansenii CBS767]
Length = 810
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 158/311 (50%), Gaps = 28/311 (9%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSF 89
+ E ++ HPE+ RI I L I P + A ++L
Sbjct: 108 SYFEYIDPHPEDPRRIYRIYKKLAEAGLIQDSSLSGIDEIGPLMVKIPIREASAEEILEV 167
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+ +++ + + + + D +N S+ +A L+ G T+ A K V++G K
Sbjct: 168 HSEEHLRFIESTETMSRERLLEETERGDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVK 227
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P G+C +N +A + L ++V++D D+H+GNGT +
Sbjct: 228 NSLAVVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKRYPESVRRIVIVDWDIHHGNGTQK 287
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
FY +VL ISLH +G + P + G + GEG G GY+LNIP G D Y +
Sbjct: 288 AFYDDPRVLYISLHRYENGKFYPG-TKYGNSTQTGEGAGEGYSLNIPWRTPGMDDGDYFY 346
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P I +F+P+++++ G D++ D G ++ GY M +++ +A G+
Sbjct: 347 AFNKVVIPVITEFDPDLVIVSSGFDAADGDIIGGCHVSPTGYGHMTHLLKGIAK----GK 402
Query: 319 LLIVQEGGYHV 329
L +V EGGY++
Sbjct: 403 LCVVLEGGYNL 413
>gi|324504135|gb|ADY41786.1| Histone deacetylase 6 [Ascaris suum]
Length = 572
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 171/335 (51%), Gaps = 15/335 (4%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L +D L D +E E+ + R+++ + + + P + + + + Q
Sbjct: 143 LAYDPRVELHREEIDMAHVERPERTSMIAKRLRDTGLLRRCAILQPREATYDELRL-VHQ 201
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI- 144
L + I E+ E+++ + + S+ A++ AVG+ L + VLD K
Sbjct: 202 LAHIKHMEAIAEVDESERRREEDHSNSMYFCKESFRASIAAVGSILECVDAVLDEERKER 261
Query: 145 ---AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
A+AL+RPPGHHA P+ A G+C NN +A + A+ G +++++D DVH+GNG E
Sbjct: 262 ARNAFALIRPPGHHATPSQAAGFCIFNNVAIAAKYAMEKYGLERILIVDWDVHHGNGIQE 321
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQN--GTVDELGEGEGFGYNLNIPLPNGT-GDRGYV 257
FY VL ISLH + G +P N V++ GEG G GY++NIP +G D Y
Sbjct: 322 IFYSDPHVLYISLHRHDD--GLFYPANEPKDVEDGGEGAGLGYSINIPFSHGRMSDNDYR 379
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
A T++V+P ++ P ++++ G D++ D G L+ Y ++ + +LA G
Sbjct: 380 MAFTKVVMPIAYEYSPQLVIVSSGFDAAYGDILGGYELSAQCYAQLTYQLGALAK----G 435
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLS 352
R+++ EGGY +T C A ++ +L+ L L+S
Sbjct: 436 RIIVALEGGYSLTVLQDCAEAVVKTLLDRCLPLVS 470
>gi|70731492|ref|YP_261233.1| acetylpolyamine aminohydrolase [Pseudomonas protegens Pf-5]
gi|68345791|gb|AAY93397.1| acetylpolyamine aminohydrolase [Pseudomonas protegens Pf-5]
Length = 341
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 128/222 (57%), Gaps = 11/222 (4%)
Query: 109 VCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ DG+ + +W AA + + ++ + +LDG AYAL RPPGHHA+ A G+C+L
Sbjct: 111 LADGSCPVGESTWRAAYWSAQSAVAGAQALLDGE-PAAYALCRPPGHHARSEAAGGFCYL 169
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NNA +A Q+ L +V V+D D+H+G G E FY VL +S+H + ++ P
Sbjct: 170 NNAAIAAQV-LRDKYARVAVLDTDMHHGQGIQEIFYERADVLYVSVHGDPTNFYPG--VA 226
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G +E G G G GYNLN+P+ +G + ++ A E + A++ F+ ++VL +G D
Sbjct: 227 GFAEERGAGAGEGYNLNLPMAHGASEGDFL-ARLEQALEAVKAFDAEVLVLSLGFDIYEL 285
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T DG+ +G+ +RSL G LIVQEGGYH+
Sbjct: 286 DPQSKVAVTRDGFAILGQRIRSL-----GLPCLIVQEGGYHL 322
>gi|398906874|ref|ZP_10653659.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM50]
gi|398172335|gb|EJM60202.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM50]
Length = 341
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 131/222 (59%), Gaps = 11/222 (4%)
Query: 109 VCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G+C++
Sbjct: 111 LADGSCPVGEQTWRSAYWSAQSAIAGAQALLDGE-PAAYALCRPPGHHARAEAAGGFCYV 169
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NNA +A Q+ L +G +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 170 NNAAVAAQV-LRAGFERVAVLDTDMHHGQGIQEIFYERDDVLYVSVHGDPTNFYPG--VA 226
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G DE G G G G+NLN+P+ +G + ++ A E+ + A+++F ++VL +G D
Sbjct: 227 GFSDERGVGAGEGFNLNLPMAHGASEADFL-AQLEVALAAVKEFGAQVLVLSLGFDIFEL 285
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +RSL G LIVQEGGYH+
Sbjct: 286 DPQSKVAVTREGFARLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|58264444|ref|XP_569378.1| histone deacetylase clr3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110099|ref|XP_776260.1| hypothetical protein CNBC6490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258932|gb|EAL21613.1| hypothetical protein CNBC6490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225610|gb|AAW42071.1| histone deacetylase clr3, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 737
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 150/290 (51%), Gaps = 14/290 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ RIK I + L + + + Q+L H + +++ + + +
Sbjct: 91 HPEDPMRIKRIFTRLAEQGLIRRMKRLDFEEVKFEQVLLVHGEEMWDKVQATELLSDQQI 150
Query: 110 CD--------GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
D + + A L+ G + A + V + A+A+VRPPGHHA+P
Sbjct: 151 QDMKEYYDQLSLYVCRETAHCARLSAGGVIQACRSVCKNEVRNAFAIVRPPGHHAEPNEH 210
Query: 162 DGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSW 220
G+CF NN +A + G K V+++D DVH+GNGT F+ VL +SLH + G
Sbjct: 211 MGFCFFNNVAVATREMQREGLAKKVLILDWDVHHGNGTQRAFWHDGDVLYMSLHRHEGGT 270
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
+ G+++ +G+GEG G ++NIP P G GD Y++A +++P +F+P+++++
Sbjct: 271 FYPNSDFGSLNMVGDGEGVGKSVNIPWPGPGFGDADYIYAFQRIIMPIAYEFDPDLVIIS 330
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
G D++ D G+ +T Y M ++ SLA GG+L++ EGGY++
Sbjct: 331 AGFDAADGDMLGQCRVTPAAYGHMTHMLSSLA----GGKLVVALEGGYNL 376
>gi|421603486|ref|ZP_16045874.1| acetylpolyamine aminohydrolase [Bradyrhizobium sp. CCGE-LA001]
gi|404264400|gb|EJZ29692.1| acetylpolyamine aminohydrolase [Bradyrhizobium sp. CCGE-LA001]
Length = 341
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 161/323 (49%), Gaps = 59/323 (18%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA 101
G ++ + PE +DR+ + K + P ++ G A+I H+P+Y++ L EA
Sbjct: 21 GVVKRTTEQPERADRLLKGLKDGKHQLVEP-TTFGQGPRARI------HSPEYLSFLSEA 73
Query: 102 DKA-------GGKMVCD-------------------------GTVLNPGSWGAALLAVGT 129
+A G +M+ + + PG+W AA A
Sbjct: 74 WEAWTALGDSGPEMIGNIHPVRHAATYPTHIVGKLGWHTADTAAPIGPGTWAAACAATDV 133
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
++A + V+DG YAL RPPGHHA MA G+CFLNN+ +A L +VV++D
Sbjct: 134 AVTAAQMVMDGE-DATYALCRPPGHHAYRDMAGGFCFLNNSAIAAA-HLRQKHERVVILD 191
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGS-----WGPSHPQNGTVDELGEGEGFGYNLN 244
+DVH+GNGT FY V TIS+H + + WG SH E GEG G G NLN
Sbjct: 192 VDVHHGNGTQGIFYERPDVYTISIHADPVAYYPYVWGYSH-------ERGEGAGLGANLN 244
Query: 245 IPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMG 304
IPL GTGD GY+ A+ ++ AI+ F P +V+ +G D+S DP +T G+R +G
Sbjct: 245 IPLAIGTGDDGYMQAL-DVARRAIESFAPGALVIALGLDASEHDPLKGLAVTTPGFRRIG 303
Query: 305 RIVRSLADRYSGGRLLIVQEGGY 327
+ + + G + VQEGGY
Sbjct: 304 QAIAKM-----GLPTVFVQEGGY 321
>gi|327301305|ref|XP_003235345.1| histone deacetylase [Trichophyton rubrum CBS 118892]
gi|326462697|gb|EGD88150.1| histone deacetylase [Trichophyton rubrum CBS 118892]
Length = 794
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 163/324 (50%), Gaps = 33/324 (10%)
Query: 46 VLEKHPENSDRIKNIVSILKR-----------GPISPY-ISWHSGIPAQIPQLLSFHTPD 93
L+ HPE+ R+ I L R GP+ P + A +++ HT +
Sbjct: 166 TLDVHPEDPRRVYYIYRELGRAGLIADGGEFQGPLVPQPLKRIEARDATEAEIMLVHTKE 225
Query: 94 YINELVEADKAGGK-------MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAY 146
+ E V++ K + D N ++ +ALL+ G + K V + K A
Sbjct: 226 HY-EFVKSTKDMSEDELLELEHTRDSIYFNSLTFTSALLSCGGAIETCKAVAEERVKNAI 284
Query: 147 ALVRPPGHHAQPTMADGYCFLNN---AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFY 203
A++RPPGHHA+ G+C NN A A Q L C K++++D DVH+GNG FY
Sbjct: 285 AVIRPPGHHAESNKTMGFCLFNNVSVAARACQHVLGDKCRKIMILDWDVHHGNGVQRMFY 344
Query: 204 RSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMT 261
VL IS+H+ GS+ P + G D GEG G G N+NIP P G GD Y++A
Sbjct: 345 NDPNVLYISIHVYRDGSFYPGGDE-GNWDYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQ 403
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
E+V+P +F+P+++++ G D++A D G +T Y M R++ +LA+ G++ +
Sbjct: 404 EVVMPIGYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYSHMTRMLMNLAN----GKVAV 459
Query: 322 VQEGGYH---VTYSAYCLHATLEG 342
EGGY+ ++ SA + TL G
Sbjct: 460 CLEGGYNFRSISKSALAVTRTLMG 483
>gi|167033041|ref|YP_001668272.1| histone deacetylase superfamily protein [Pseudomonas putida GB-1]
gi|166859529|gb|ABY97936.1| histone deacetylase superfamily [Pseudomonas putida GB-1]
Length = 340
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 130/228 (57%), Gaps = 15/228 (6%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G+ + DG+ + +W +A + + ++ K +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AGRYLADGSCPVGENTWRSAYWSAQSAVAGAKAILDGE-PAAYALCRPPGHHARFDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q AL S +V V+D D+H+G G E FY VL +S+H + ++ P
Sbjct: 166 FCYINNAAVAAQ-ALRSRYSRVAVLDTDMHHGQGIQEIFYDRRDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G GEG GYNLN+P+ +G + ++ ++ + A++ F +VL +G D
Sbjct: 225 --VAGFADERGCGEGEGYNLNLPMAHGASEADFM-GQLDVALAAVKDFGAEALVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
DP + +T +G+ +G +R+L RL LIVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTTEGFAALGERIRAL-------RLPCLIVQEGGYHL 322
>gi|449546463|gb|EMD37432.1| hypothetical protein CERSUDRAFT_83190 [Ceriporiopsis subvermispora
B]
Length = 618
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 156/297 (52%), Gaps = 32/297 (10%)
Query: 50 HPENSDRIKNIVSILK---------RGPISPYIS-----WHSGIPAQIPQLLSFHTPDYI 95
HPE RI I LK R PI P + HS A ++L+ H+
Sbjct: 10 HPEQPARIARIFDKLKDHGCIGQMRRLPIRPALRDEVLLVHS--EALWEKVLAIHS---- 63
Query: 96 NELVEADKAGGKMVCDGTVL--NPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG 153
+ E D A + L +P + A L+ G + A V G + ++A+VRPPG
Sbjct: 64 --MSEQDIADSESYYSELSLYVHPSTPYCAQLSCGGVIEAALAVARGDVQKSFAIVRPPG 121
Query: 154 HHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HHA+P G+CF NN +A ++ L + KV+++D DVH+GNGT + FY VL +S
Sbjct: 122 HHAEPDEHMGFCFFNNVSIATKVVQLRTPIKKVMILDWDVHHGNGTQKAFYDDPSVLYVS 181
Query: 213 LHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQK 270
LH + G++ P+ P G++ GEG G GY++N+P P G GD Y+ A ++++P +
Sbjct: 182 LHRYDGGNFYPNGP-FGSLISCGEGAGLGYSVNVPWPEKGMGDADYLLAFQKVIMPIAIE 240
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
F P ++++ G D++ D G +T DGY M ++ SLA+ G+L++ EGGY
Sbjct: 241 FAPELVIISAGFDAADGDDLGECHVTPDGYAHMTHMLSSLAN----GKLVVALEGGY 293
>gi|428227117|ref|YP_007111214.1| histone deacetylase superfamily protein [Geitlerinema sp. PCC 7407]
gi|427987018|gb|AFY68162.1| histone deacetylase superfamily [Geitlerinema sp. PCC 7407]
Length = 309
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 39/339 (11%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
++ + + D L HDTG LF HPE +DR++ ++S L+ P + ++W
Sbjct: 1 MLPIIYADDFLLHDTG--LF--------------HPERADRLRAVMSALRAAPWADQLAW 44
Query: 76 HSGIPAQ----IPQLLSFHTPDYINEL-VEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
S P + +P + HTPDY+ ++ V A++ GG + D TV++P S+ A LAV
Sbjct: 45 RSPTPIETRSVLPWIEQIHTPDYVQQVRVLANRGGGHLDGD-TVVSPRSFEIAQLAVSAW 103
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVID 189
L + VL+ G+ A+ L RPPGHHA G+C NA +A AL+ G +V ++D
Sbjct: 104 LDGVDQVLET-GRPAFVLARPPGHHAVRDRGMGFCIFANAAIAAHYALSQPGIQRVAILD 162
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYN-LNIPLP 248
DVH+GNGT ++ SLH + P +P G+ E +GF +N LN+PLP
Sbjct: 163 WDVHHGNGTQALTETHPQIFYCSLHQS-----PCYPGTGSRSE----QGFHHNVLNLPLP 213
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
+ Y E +VP ++ F P+++++ G D++ D CL Y +
Sbjct: 214 PESTFEDYDPLFREKIVPTLKAFRPDLLIVSAGYDANKDDAIASLCLKPADYGLFTQHCL 273
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
SL R+L EGGY + + ATLE L P
Sbjct: 274 SLTP-----RILFGLEGGYDLASLGQSVVATLERCLLTP 307
>gi|358380999|gb|EHK18675.1| hypothetical protein TRIVIDRAFT_88835 [Trichoderma virens Gv29-8]
Length = 724
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 170/345 (49%), Gaps = 52/345 (15%)
Query: 50 HPENSDRIKNIVSILKR------GPIS-----------PYISWHSGIPAQIPQLLSFHTP 92
HPE+ RI I K+ GP S Y+ PA ++ H+P
Sbjct: 76 HPEDPRRIHEIFKAFKKMGLVYTGPESELPRIMKDCPTKYMWRIPARPATREEICLAHSP 135
Query: 93 DYI--------------NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL 138
D++ EL G + + G++ S+ AALL+VG + K V+
Sbjct: 136 DHLAWVESLDTISTAELRELTRRFDQGRESLYVGSM----SYPAALLSVGGAIETCKSVV 191
Query: 139 DGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYG 195
G K A+A++RPPGHHA+ G+CF NN +A+++ C KV+++D DVH+G
Sbjct: 192 TGQVKNAFAVIRPPGHHAEFDQPMGFCFFNNVPVAIRVCQQDYPDQCRKVLILDWDVHHG 251
Query: 196 NGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQN-----GTVDELGEGEGFGYNLNIPLPN 249
NGT FY VL IS+H+ +G + P P N G ++ G G+G G N+NI +
Sbjct: 252 NGTQNIFYEDPNVLYISIHVYQNGMFYPGKPPNPMTPDGGIEHCGTGQGLGKNINIGWHD 311
Query: 250 -GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
G GD Y+ A ++V+P ++F P+++V+ G D++ D G +T Y M ++
Sbjct: 312 QGMGDGEYMAAFQKIVMPIAKEFNPDLVVISAGFDAADGDELGGCFVTPACYAHMTHMLM 371
Query: 309 SLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEGVLNLPLAL 350
SLAD G++ + EGGY+ ++ SA + TL G LAL
Sbjct: 372 SLAD----GKVAVCLEGGYNLRAISSSAVAVARTLMGEPPPKLAL 412
>gi|430746865|ref|YP_007205994.1| deacetylase [Singulisphaera acidiphila DSM 18658]
gi|430018585|gb|AGA30299.1| deacetylase, histone deacetylase/acetoin utilization protein
[Singulisphaera acidiphila DSM 18658]
Length = 582
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 136/233 (58%), Gaps = 16/233 (6%)
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
+ +AG + T L+ ++ AA AV LS + + GH + Y+L RPPGHHA+
Sbjct: 338 RSRRAGYYCIDTFTPLSRDAYKAARAAVNVALSGAEAIQAGH-PLVYSLCRPPGHHAERD 396
Query: 160 MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGS 219
G+C+ NA +A Q L + G+V ++DID H+GNG + FY+ + VLTIS+H H S
Sbjct: 397 TYGGFCYFCNAAIAAQY-LVASFGRVAILDIDYHHGNGAQDIFYQRSDVLTISIH-GHPS 454
Query: 220 WGPSHPQ-NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ ++P +G DE+GEG G G+N NIPL T D Y+ A+ E + ++KF+P ++V+
Sbjct: 455 F--AYPYFSGFADEIGEGPGKGFNHNIPLAEDTHDGRYLEALDEALA-MVRKFKPEVLVV 511
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
VG D + DP G +T DG E+G R G +L L+VQEGGY++
Sbjct: 512 PVGLDIAKADPTGTWSVTPDGLFEIGY-------RIGGMKLPTLLVQEGGYNI 557
>gi|149643027|ref|NP_001092430.1| histone deacetylase 6 [Bos taurus]
gi|148744044|gb|AAI42299.1| HDAC6 protein [Bos taurus]
gi|296470726|tpg|DAA12841.1| TPA: histone deacetylase 6 [Bos taurus]
Length = 1129
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 180/363 (49%), Gaps = 19/363 (5%)
Query: 30 TGKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLL 87
+G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 84 SGTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELM 142
Query: 88 SFHTPDYINELVEADKAGGKM-------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
H+ +YI+ L+E + + D L+P S+ A LA G+ L + VL+
Sbjct: 143 LVHSLEYID-LMETTQYMNEEELHVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLEA 201
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ A++RPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G G
Sbjct: 202 EIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQ 261
Query: 200 EGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYV 257
F + VL S+H G + P H + G G+G GY +N+P G D Y+
Sbjct: 262 FAFDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTTGLGQGQGYTINVPWNQVGMQDADYI 320
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
A +++P +F+P ++++ G D+ DP G T G+ ++ ++ LA+ G
Sbjct: 321 AAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAE----G 376
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQN 377
+L++ EGGY++ A + ATL +L P +L P A P +A +E+++ +
Sbjct: 377 KLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLESPGAPCPSAQASLSCTLEALEPFWE 436
Query: 378 DVI 380
++
Sbjct: 437 SLV 439
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 31/381 (8%)
Query: 6 SEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILK 65
S P P + + +D M++H L+D HPE RI I+ L
Sbjct: 471 SVPIWPVLQARTGLVYDQQMMDH---HNLWDN-----------YHPEMPQRIHFIMHHLD 516
Query: 66 RGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGS 119
++ PA +LL+ H+ +++ L +K + + D + +
Sbjct: 517 ELGLAKRCHSLPARPATDAELLTCHSAEHLERLRATEKMKTRELRREGANYDSIYICSST 576
Query: 120 WGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ--LA 177
+ A LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A
Sbjct: 577 FACAQLAAGAACRLVEAVLAGEVLNGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQA 636
Query: 178 LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEG 236
++ +++++D D+H+GNGT F VL ISLH +HG++ P G +G+
Sbjct: 637 ISGHALRILIVDWDIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPM-GNEGACTRIGKA 695
Query: 237 EGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
G G+ +N+ NG GD Y+ A LV+P +F P ++++ G D++ DP G
Sbjct: 696 TGTGFTVNVAW-NGPRMGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQ 754
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
++ +GY + + LA+ G ++++ EGGY++T + + A +L PL LL+
Sbjct: 755 VSPEGYAHLTHQLMGLAN----GHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTRL 810
Query: 355 IAYYPEDEAFPVKVIESIKQY 375
+A K I+ ++Y
Sbjct: 811 RPPLSGAQASITKTIQVHRRY 831
>gi|320354365|ref|YP_004195704.1| histone deacetylase superfamily protein [Desulfobulbus propionicus
DSM 2032]
gi|320122867|gb|ADW18413.1| histone deacetylase superfamily [Desulfobulbus propionicus DSM
2032]
Length = 321
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 152/338 (44%), Gaps = 29/338 (8%)
Query: 14 EGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYI 73
E I + D HDTG G HPE +R++ I L +G ++ I
Sbjct: 4 EPAITLITDPAFCRHDTGGG---------------DHPEAPERMQVITDRLMQGHLAGRI 48
Query: 74 SWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLS 132
+ PA QLL+FHT ++ EA +G + + S+ A L+ G L
Sbjct: 49 RTFAPRPATRAQLLTFHTEGWLFRFEEAVLSGRTYIDHPDNQVGYESFDIATLSAGAGLV 108
Query: 133 AMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDID 191
+ + G + + RPPGHHA+P G+CF NN +A + +V V D D
Sbjct: 109 GVDRIERQPGTVVFCQTRPPGHHAEPNQPYGFCFFNNCVIAARYWQQEYSRRRVCVFDFD 168
Query: 192 VHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT 251
H+GNG F + IS+H H S+ S+P G ++ G G G G LN+PLP G
Sbjct: 169 AHHGNGIQTAFEQEADTAYISIH-EHPSF--SYPGTGWAEDKGVGPGKGTILNLPLPPGA 225
Query: 252 GDRGYVHAMTELVVPAIQKF----EPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
G + + P I+ F P+ +++ G D+ D T+D YR +G V
Sbjct: 226 GAEQVLR-----LFPKIRNFLDTIRPDALIVGAGFDAHRQDDMSGLAFTVDLYRRLGNFV 280
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
LA Y+ GR+L + EGGY + C+ A L G++
Sbjct: 281 TELARDYTQGRVLSILEGGYFLEKLGVCVEAYLSGLVE 318
>gi|308807393|ref|XP_003081007.1| histone deacetylase family protein (ISS) [Ostreococcus tauri]
gi|116059469|emb|CAL55176.1| histone deacetylase family protein (ISS) [Ostreococcus tauri]
Length = 389
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 165/345 (47%), Gaps = 24/345 (6%)
Query: 47 LEKHPENSDRIKNIVSILKRGPI----SPY-ISWHSGIP-AQIPQLLSFHTPDYIN--EL 98
LE HPE + R+ I+ L++G + P + +G+ A L HT +Y EL
Sbjct: 51 LEGHPECAARVPAILKELEKGQLLGTHRPQDVMELTGVELAPKSALEGVHTKNYATGLEL 110
Query: 99 VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK----IAYALVRPPGH 154
+ +A + T ++ A+ G ++ + V D K + LVRPPGH
Sbjct: 111 LCGTRAPVNLDTAPTYCTTSTYADAMRGAGAAIALVDEVCDRSKKGLTPSGFGLVRPPGH 170
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
HA P A G+C + NA +A + A G +V++ D DVH+GNGT + F+ VL +S H
Sbjct: 171 HATPRGAMGFCLVGNAAVAARHAQKRGHERVMIFDYDVHHGNGTNDIFHSDLSVLFVSTH 230
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+ S+P G ++G EG G +NIPLP G+GD+ + A E+V+P +F+P+
Sbjct: 231 EDG-----SYPGTGKFTDVGSDEGIGATINIPLPPGSGDKAVLTAFEEVVMPGAARFKPD 285
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
I++ G D+ DP Y + ++ LA+ GR++ + EGGY
Sbjct: 286 FIIVSAGYDAHWRDPLAGLTFRSGTYHRLCTKLKELANELCEGRIVFLLEGGYD------ 339
Query: 335 CLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDV 379
L EGV + AL+ D + + + E +++ N+V
Sbjct: 340 -LIGLSEGVADSFRALVGDDSTDFGDIPGLRDEPEEKVRKILNEV 383
>gi|395330702|gb|EJF63085.1| histone deacetylase complex protein [Dichomitus squalens LYAD-421
SS1]
Length = 677
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 29/319 (9%)
Query: 47 LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQI---PQLLSFHTPDYINELVEADK 103
+ H E +RI I ILK+ +S +P + ++L H+ ++++
Sbjct: 66 IRSHCEQPERISRIFDILKQNGC---LSEMKQLPIRRVLREEVLLVHSQSLWDKVLALHS 122
Query: 104 AGGKMVCDGTV--------LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
+ + D ++P + AA L+ G + A V G K A+A+VRPPGHH
Sbjct: 123 LTDQDIADSEAYYNDLSLYVHPTTPYAAQLSAGGVIEASLAVARGEVKKAFAIVRPPGHH 182
Query: 156 AQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A+P G+CF NN +A ++ L + K++++D DVH+GNGT F VL ISLH
Sbjct: 183 AEPDEHMGFCFFNNVSIAAKVVQLRTPIKKILILDWDVHHGNGTQRAFNDDPSVLYISLH 242
Query: 215 MNH-GSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFE 272
G++ P+ P G++ GEG G GY++NIP P G GD Y+ A ++V+P +F
Sbjct: 243 RYEGGNFYPNGP-FGSMTSCGEGRGLGYSVNIPWPEPGMGDADYILAFQKIVMPIALEFS 301
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P+++++ G D++ D G ++ GY M ++ SLA GG++++ EGG
Sbjct: 302 PDLVMISAGFDAADGDDLGECHVSPAGYAHMTHMLCSLA----GGKVVVALEGG------ 351
Query: 333 AYCLHATLEGVLNLPLALL 351
YCL A L + +L
Sbjct: 352 -YCLDAIANSALAVTQVIL 369
>gi|94263759|ref|ZP_01287566.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
gi|93455859|gb|EAT06022.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
Length = 349
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFY 203
A+ALVRPPGHHA+ + G+C NN +A A G ++++ D D+H+GNGT F
Sbjct: 116 AFALVRPPGHHAEHAHSSGFCLFNNIAIAAHYARQKLGFKRILIFDWDLHHGNGTQHAFD 175
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
S++VL S H P P +GT+ E+G G+G GY +N+PLP G D + EL
Sbjct: 176 DSDQVLFFSTHQF-----PCFPGSGTLSEVGRGKGEGYTINVPLPGGQDDAAFARICNEL 230
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
+VP + ++P +I++ G D+ A DP G ++ GY M R++ LA + RL++V
Sbjct: 231 LVPLARAYQPELIMVSAGFDTYAGDPLGSMMVSELGYAYMTRVLTELASQLCQQRLVLVL 290
Query: 324 EGGYHV 329
EGGY++
Sbjct: 291 EGGYNL 296
>gi|297570602|ref|YP_003691946.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
gi|296926517|gb|ADH87327.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
Length = 350
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 153/312 (49%), Gaps = 26/312 (8%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
V + + L HD G G H E+ R++ + +L P +
Sbjct: 7 VLYSEVFLAHDPGPG----------------HVESPRRLEGLYRLLDAEPQRQRFLFPEF 50
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKH 136
PA L H +I + A AG C T + S+ AA LA G ++A+
Sbjct: 51 APADEDTLALNHDRRHIARV--AKTAGSPFECLDPDTYTSARSYEAACLAAGAAVAAVDL 108
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYG 195
VL G A+ALVRPPGHHA+ G+C NN +A + AL N G +V+++D D+H+G
Sbjct: 109 VLGGEADNAFALVRPPGHHAEHDHTSGFCLFNNIAVAARHALKNHGLERVLIVDWDLHHG 168
Query: 196 NGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRG 255
NGT FY +++VL S H P P +G + E G+G G GY +N+PL G D
Sbjct: 169 NGTQHAFYDTDQVLFFSTHQY-----PYFPGSGALSETGQGAGEGYTINVPLQGGQDDAA 223
Query: 256 YVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYS 315
+ EL++P +++ P +I++ G D+ DP G ++ +GY + ++ LA
Sbjct: 224 FARIFNELLIPVAEQYRPELILVSAGFDTYGGDPLGTMMVSEEGYAYLTGVLVDLAAGLC 283
Query: 316 GGRLLIVQEGGY 327
GGRL ++ EGGY
Sbjct: 284 GGRLALMLEGGY 295
>gi|206889909|ref|YP_002248504.1| acetoin utilization protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741847|gb|ACI20904.1| acetoin utilization protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 304
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 155/329 (47%), Gaps = 28/329 (8%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ +DD L H+T +G HPE+ +R+ IV+ LK I +
Sbjct: 4 VAFIYDDIFLKHETPEG----------------HPESKERLIAIVNHLKNKEIWRKLLHI 47
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
A +L H P YI+++ + G + D T L+ S+ A AVG L A+
Sbjct: 48 KPRKATEKELALVHEPHYIDKI--KNSPAGYIEPD-TYLSEHSYEVACYAVGAVLQAVDG 104
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
VL+ + VRPPGHHA+ A G+C NN + A G K+ ++DIDVH+GN
Sbjct: 105 VLNKDFDGVFCAVRPPGHHAEIDSAMGFCIFNNIAVGAAYAKTKGFKKIFIVDIDVHHGN 164
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT F V S H P +P G E+G G G G N+PL +G+G + Y
Sbjct: 165 GTQHIFEDDCSVFYFSSHQ-----FPFYPGTGRELEMGRGAGEGCTYNVPLRSGSGTKEY 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ +++ I++ +P +I++ G D DP +T +G R I+RS+
Sbjct: 220 LTVFQDIMPQKIREVKPELILVSAGYDMHKDDPMSYINVTTEGVRS---IIRSILKSSYA 276
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLN 345
++ ++ EGGY+ A C+ TLE +L+
Sbjct: 277 PKIFVL-EGGYNAQVLAECVGVTLEEMLS 304
>gi|399008500|ref|ZP_10710972.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM17]
gi|398116357|gb|EJM06122.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM17]
Length = 341
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGELTWRSAYWSAQSAIAGARALLDGE-PAAYALCRPPGHHARAEAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNNA +A Q+ L +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYLNNAAIAAQV-LREKFARVAVLDTDMHHGQGIQEIFYERDDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G GYNLN+P+ +G + ++ A E + A++ F+ ++VL +G D
Sbjct: 225 --VAGFADERGSGAGQGYNLNLPMAHGASEAEFL-AQLETALAAVKSFDAKVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T G+ +G + SL G LIVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTRAGFARLGERIHSL-----GLPCLIVQEGGYHL 322
>gi|219851271|ref|YP_002465703.1| histone deacetylase superfamily protein [Methanosphaerula palustris
E1-9c]
gi|219545530|gb|ACL15980.1| histone deacetylase superfamily [Methanosphaerula palustris E1-9c]
Length = 328
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 139/279 (49%), Gaps = 18/279 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
H E S R++ + + + RG ++ H + A LL+ H Y+ + GG
Sbjct: 21 HDECSTRLREVEAGIPRGVVT-----HDPVMATEADLLTVHDYHYVRRIRSLCCDGGVYY 75
Query: 110 CD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T L S+ A A G+ + A + LDG + +ALVRPPGHHA+P G+C N
Sbjct: 76 LDPSTYLTAESFTVASFAAGSAIDAAQRALDG--EHCFALVRPPGHHAEPDRGMGFCLFN 133
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
NA +A G +V ++D D+H+GNGT + FY S++VL S+H + + P+ G
Sbjct: 134 NAAIAATHLQREGM-RVAIVDWDLHHGNGTQKIFYSSDQVLYCSIHQQN-----TFPRTG 187
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
VDE+G G G G+ LN PL G Y + E+ AI++F P+++++ GQD D
Sbjct: 188 WVDEIGTGAGKGFTLNAPLQPGATITDYRLVLEEIFGAAIKRFRPDLVIVSAGQDPLGDD 247
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
P L + M I+ + L +V EGGY
Sbjct: 248 PKSGMLLRPQDFGTMAGILAGTVET----PLALVLEGGY 282
>gi|374369913|ref|ZP_09627930.1| histone deacetylase superfamily protein [Cupriavidus basilensis
OR16]
gi|373098500|gb|EHP39604.1| histone deacetylase superfamily protein [Cupriavidus basilensis
OR16]
Length = 342
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 123/225 (54%), Gaps = 10/225 (4%)
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+AG M + P +W AA + A + V DG + AYAL RPPGHHA A+
Sbjct: 108 QAGFHMGDAACSIGPNTWRAAAGSADVATHAAQLVADGE-RAAYALCRPPGHHAYADRAN 166
Query: 163 GYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
G+C+LNN +A Q L +V ++DID+H+GNGT FYR N VLT+SLH + + P
Sbjct: 167 GFCYLNNTAIAAQ-HLRRHHDRVAILDIDMHHGNGTQGIFYRRNDVLTVSLHGDPMLFTP 225
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
G E GE EG GYN+N PL GTGD Y+ A+ ++ + +I+ F P +V+ +G
Sbjct: 226 FF--TGHAHERGEAEGLGYNINRPLARGTGDEAYLAALRDVCL-SIRAFAPGALVVALGL 282
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP +T G+ + + L G ++VQEGGY
Sbjct: 283 DAHERDPYQALAVTTPGFALITAEIARL-----GLPTVLVQEGGY 322
>gi|296447919|ref|ZP_06889828.1| Histone deacetylase [Methylosinus trichosporium OB3b]
gi|296254556|gb|EFH01674.1| Histone deacetylase [Methylosinus trichosporium OB3b]
Length = 310
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 145/280 (51%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ I L++ ++ + A LL H YI + A G +
Sbjct: 21 HPEQPDRLRAIERSLEQERFQT-LARVTAPAATREALLRVHPESYIRRIEAAAPHEGLVA 79
Query: 110 CD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T++ P + AAL AVG ++A+ V+ G A+ VRPPGHHA P+ G+CF N
Sbjct: 80 LDVDTIMCPQTLDAALHAVGGAVAAVDEVMRGTADTAFVGVRPPGHHAGPSTPMGFCFFN 139
Query: 169 NAGLAVQLALNSGCG-KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N A + AL + +V ++D DVH+GNGT + F+ ++VL S H P +P
Sbjct: 140 NVAAAARHALAAHAAERVAIVDFDVHHGNGTQDIFWSDSRVLFCSTHQ-----APYYPGT 194
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G + E GE + +N PL G+ ++ A+ ++P ++ F P+++++ G D+
Sbjct: 195 GAMSETGEHDNI---VNAPLWAGSTGDDFLEALKTRILPRVKNFSPDLLLISAGFDAHRD 251
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G T Y E + + LADR +GGR++ + EGGY
Sbjct: 252 DPLGGLRFTEQDYAEATKRLMDLADRSAGGRVVSLLEGGY 291
>gi|414170520|ref|ZP_11426074.1| hypothetical protein HMPREF9696_03929 [Afipia clevelandensis ATCC
49720]
gi|410884298|gb|EKS32126.1| hypothetical protein HMPREF9696_03929 [Afipia clevelandensis ATCC
49720]
Length = 309
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 141/280 (50%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ I L P + + + A + + H+ +YI+EL G +
Sbjct: 20 HPERPDRLRAIEQGLSAEPFTNLVRVEAP-EADLDVVALCHSNEYIDELRHIAPKDGMVY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W AAL A G ++A+ V+ A+ RPPGHHA+ + G+CF +
Sbjct: 79 LDGDTSMSPGTWEAALRATGGAVAAVDAVMKNKRTNAFVGTRPPGHHAETSKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
+A +A + A G + V+D DVH+GNG+ E F+ V+ S H P P
Sbjct: 139 SAAIAARYAQRKYGIERACVVDFDVHHGNGSQEIFWADPTVMYASTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL G G R + A ++P ++ F P +IV+ G D+
Sbjct: 194 GATQERGDQDTV---VNAPLRPGNGGREFREAFDLAILPRLEAFAPELIVISAGFDAHWR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G L + + + R + +AD+ + GR++ V EGGY
Sbjct: 251 DPLGSLELREEDFAWVTRKLMEIADKSAEGRIVSVLEGGY 290
>gi|374293692|ref|YP_005040715.1| putative deacetylase [Azospirillum lipoferum 4B]
gi|357427095|emb|CBS90033.1| putative deacetylase [Azospirillum lipoferum 4B]
Length = 309
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 155/317 (48%), Gaps = 33/317 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+F L HDTG G HPE SDR++ +++ L+ +
Sbjct: 2 FTTLFTHPACLEHDTGLG----------------HPECSDRLRAVLAALETEEFH-MLER 44
Query: 76 HSGIPAQIPQLLSFHTPDYINELV----EADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
A + QLL H ++I+ ++ E + AG V TV++PGS AAL A G
Sbjct: 45 QEAPRATVEQLLRAHPQEHIDRVLSLIPEVEHAG---VDADTVVSPGSGEAALRAAGAVC 101
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDI 190
+A+ V G + A+ VRPPGHHA+ A G+C NNA + A + G +V V+D
Sbjct: 102 AAVDAVATGQSRNAFCAVRPPGHHAERDKAMGFCLFNNAAVGAYHARAAHGLQRVAVMDF 161
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT + +L S H + P +P G E GE +G +N PLP
Sbjct: 162 DVHHGNGTQDILQHDPDMLYCSTHQS-----PLYPGTGDAGEKGE---YGNCVNAPLPAM 213
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
G + HAMT +++PAI F+P+++++ G D+ + DP L D + R + L
Sbjct: 214 AGSPEFRHAMTHVILPAIDHFKPDLLIISAGFDAHSRDPLAGLHLIDDDFVWATRKLGEL 273
Query: 311 ADRYSGGRLLIVQEGGY 327
A + G R++ V EGGY
Sbjct: 274 ARTHCGARIVSVLEGGY 290
>gi|27370650|gb|AAH41105.1| Hdac6 protein [Mus musculus]
Length = 1152
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 34/358 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D+ M++H L+D HPE RI I+ L+ ++
Sbjct: 477 PLLQNRTGLVYDEKMMSH---CNLWDN-----------HHPETPQRILRIMCHLEEVGLA 522
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y+ L +K + + D + P ++ A
Sbjct: 523 ARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAK 582
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA--LNSGC 182
LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A +
Sbjct: 583 LATGAACRLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRA 642
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +SLH + G++ P + G ++G G G+
Sbjct: 643 LRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDE-GASSQVGRDAGIGF 701
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+P NG GD Y+ A LV+P +F P ++++ G D++ DP G +T +G
Sbjct: 702 TVNVPW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEG 760
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP---LALLSDP 354
Y + ++ LA GGR++++ EGGY++ + + A +L P L LL P
Sbjct: 761 YAHLTHLLMGLA----GGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 814
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 20/339 (5%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE+ +R+ I ++ G + +S+ + A+ +L+
Sbjct: 84 GTGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARF-AEKEELML 142
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ +YI+ E + G V D L+P S+ A LA G+ L + ++
Sbjct: 143 VHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEI 202
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A++RPPGHHAQ + DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 203 RNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFI 262
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHA 259
F + VL S+H HG + P H + +G G+G GY +N+P G D Y+ A
Sbjct: 263 FDQDPSVLYFSIHRYEHGRFWP-HLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAA 321
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDP---NGRQCLTMDGYREMGRIVRSLADRYSG 316
+++P +F+P ++++ G D+ DP G T G+ + ++ LA G
Sbjct: 322 FLHILLPVASEFQPQLVLVAAGFDALHGDPKSLQGEMAATPAGFAHLTHLLMGLA----G 377
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
G+L++ EGGY++ A + A+L +L P +L +
Sbjct: 378 GKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCV 416
>gi|351706522|gb|EHB09441.1| Histone deacetylase 6 [Heterocephalus glaber]
Length = 1489
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 184/371 (49%), Gaps = 42/371 (11%)
Query: 5 PSEPPS------PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIK 58
P EPP P + + +D+ M++H L+D+ HPE RI
Sbjct: 868 PWEPPVLPILTWPLLQARTGLIYDERMMSH---CNLWDS-----------HHPETPQRIL 913
Query: 59 NIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDG 112
I+ L+ ++ PA +LL+ H+ +Y+ L +K + + D
Sbjct: 914 RIMCHLEELGLAGRCVTLPVRPATEAELLTCHSAEYVERLRATEKMKTRELHREGANFDS 973
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
+ P ++ A LA G+ ++ VL G A+VRPPGHHA+ A G+CF N+ +
Sbjct: 974 IYICPSTFTCAQLATGSACRLVEAVLSGEVLNGVAVVRPPGHHAEQDTACGFCFFNSVAV 1033
Query: 173 AVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGT 229
A + A++ +++++D D+H+GNGT F VL +SLH + G++ P + G
Sbjct: 1034 AARHAQAISGHAMRILIVDWDIHHGNGTQHIFEDDPSVLYVSLHRFDRGTFFPMGDE-GA 1092
Query: 230 VDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
++G+ G G+ +N+ NG GD Y+ A LV+P +F P ++++ G D++
Sbjct: 1093 SSQVGKAAGTGFTVNVAW-NGPRVGDAEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARG 1151
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT----YSAYCLHATLEGV 343
DP G ++ +GY + ++ LA+ GR++++ EGGY++T A C HA L G
Sbjct: 1152 DPLGGCQVSPEGYAHLTHLLMGLAN----GRIILILEGGYNLTSISESMAACTHALL-GD 1206
Query: 344 LNLPLALLSDP 354
L+ LALL P
Sbjct: 1207 LSPQLALLRPP 1217
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 175/356 (49%), Gaps = 17/356 (4%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 490 GTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELML 548
Query: 89 FHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ ++I+ + + + D L+P S+ A LA G+ L + VL
Sbjct: 549 VHSLEFIDLMETTQHMNERELRLLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEI 608
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A++RPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 609 RNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFT 668
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
F + VL S+H G + P H + G G+G GY +N+P G D Y+ A
Sbjct: 669 FDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAA 727
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G D+ DP G T G+ ++ ++ LA GG+L
Sbjct: 728 FLHILLPVAFEFQPQLVLVAAGFDAIQGDPKGEMATTPAGFAQLTHLLMGLA----GGKL 783
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
++ EGGY++ A + A+L +L P +L P A P +A +E+++ +
Sbjct: 784 ILSLEGGYNLRSLAEGVSASLHILLGDPCPMLESPGAPCPSAQASISSTLEALEPF 839
>gi|346973756|gb|EGY17208.1| histone deacetylase clr3 [Verticillium dahliae VdLs.17]
Length = 739
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 170/338 (50%), Gaps = 54/338 (15%)
Query: 50 HPENSDRIKNIVSILKRGPI-----------------SPYISWHSGIPAQIPQLLSFHTP 92
HPE+ RI+ I+ K+ + + Y+ + A ++L HTP
Sbjct: 90 HPEDPRRIEEIIKAFKKAGLLYTGPEANVAKIVQHTPTKYMWRIAAREAAKEEILLAHTP 149
Query: 93 DYI-----------NEL----VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHV 137
D+ EL VE DK + G++ S+ AALL+ G + K V
Sbjct: 150 DHYAWVENLSTMSYTELRALSVELDKGRASLYV-GSL----SFPAALLSCGGAIDTCKQV 204
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG---CGKVVVIDIDVHY 194
++ + K A+A++RPPGHHA+ + G+CF NN +AV++ C KV+V+D DVH+
Sbjct: 205 VESNVKNAFAVIRPPGHHAEYDQSLGFCFFNNVPVAVKVCQQEYPEICRKVLVLDWDVHH 264
Query: 195 GNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQN-----GTVDELGEGEGFGYNLNIPL- 247
GNG FY+ VL IS+H+ +G + P P+N G ++ G G G G N+NI
Sbjct: 265 GNGIQNIFYQDPNVLYISIHVYENGQFYPGQPENPMVPDGGMEHCGTGPGLGKNINIGWH 324
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
G GD Y+ A ++++P ++F P+++V+ G D++ D G +T Y M ++
Sbjct: 325 AQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGFDAADGDELGGCFVTPPCYAHMTHML 384
Query: 308 RSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
SLAD G+L + EGGY+ ++ SA + TL G
Sbjct: 385 MSLAD----GKLAVCLEGGYNLRAISTSAVAVARTLMG 418
>gi|302795185|ref|XP_002979356.1| hypothetical protein SELMODRAFT_110614 [Selaginella moellendorffii]
gi|300153124|gb|EFJ19764.1| hypothetical protein SELMODRAFT_110614 [Selaginella moellendorffii]
Length = 630
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 163/340 (47%), Gaps = 18/340 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK- 107
HPE RI I L+ + PA +L + HT +I ++ + +A GK
Sbjct: 24 HPEQPARITAIWKRLEDAGVLDRCVRVDARPATAEELATVHTDRHIEKMSSVSSRAYGKE 83
Query: 108 ------MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
+ N GS +ALLA G+ + V G A A+VRPPGHHA+ A
Sbjct: 84 GRAALARRYNSIYFNDGSSESALLAAGSVVELSLKVARGELASAAAIVRPPGHHAEADEA 143
Query: 162 DGYCFLNNAGLAVQLALN-----SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
G+C NN +A Q+ + +G KV+++D DVH+GNGT F++ VL S+H
Sbjct: 144 MGFCLFNNVAVAAQILSSGKVSVAGSHKVLIVDWDVHHGNGTQNMFWQDPNVLYFSVHRY 203
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNM 275
+ Q G D++G G G G+N+N+P P G D YV +++P ++F P++
Sbjct: 204 DDGYFYPGGQEGNFDKVGGGAGAGFNINVPWPRGGYSDADYVAVWEHVLMPVAREFNPDI 263
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+++ G DS+ DP G LT GY M + + LA GG++++ EGGY++ A
Sbjct: 264 VLISGGFDSARGDPLGGCKLTPLGYSIMTQELMQLA----GGKIVLALEGGYNLESIAES 319
Query: 336 LHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
A ++ +L + D Y KV + + QY
Sbjct: 320 YLACVQVLLGDIQSERHDIERAYESTWTIIDKVRQELCQY 359
>gi|448356407|ref|ZP_21545140.1| histone deacetylase [Natrialba chahannaoensis JCM 10990]
gi|445653440|gb|ELZ06311.1| histone deacetylase [Natrialba chahannaoensis JCM 10990]
Length = 342
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 162/334 (48%), Gaps = 28/334 (8%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE+ DR++ I LK+ Y+ P I + + H DY+ + + GG
Sbjct: 17 RHPESPDRLRAIRERLKKKHGVEYVE---ADPCPIDDIAAVHDRDYVESVKDFCADGGGN 73
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCF 166
T +W A + G A+ L G+ K +A+ RPPGHHA P A G+CF
Sbjct: 74 WDPDTTAVEATWDAICASAGQACWAVDAALAGNSGRKTPFAIGRPPGHHAVPDDAMGFCF 133
Query: 167 LNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
NN +A Q AL+ +V +ID DVH+GNGT + F + V +S+H
Sbjct: 134 ANNVAIAAQHALDHEEYDVDRVAIIDWDVHHGNGTQDIFEDRDDVFFVSVHEQ-----GL 188
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+P G ++E G G+G G +NIP+P GT D GY+ A + A++ F+P+++++ G D
Sbjct: 189 YPGTGDIEETGSGDGTGTTMNIPMPAGTSDAGYLAAFDGPIATALESFDPDLLLISAGFD 248
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHATL 340
+ DP R L+ + Y + VR+LA L V EGGY + S +H T
Sbjct: 249 AHRHDPISRIRLSTEAYALLTDRVRTLAGELD-APLAFVLEGGYGLDVLADSVSIVHETF 307
Query: 341 EGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
+G +PI P+D+A + +E + +
Sbjct: 308 DG---------REPIG--PDDDAEIDEAVEDVLE 330
>gi|239616432|ref|YP_002939754.1| Histone deacetylase [Kosmotoga olearia TBF 19.5.1]
gi|239505263|gb|ACR78750.1| Histone deacetylase [Kosmotoga olearia TBF 19.5.1]
Length = 321
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 124/221 (56%), Gaps = 9/221 (4%)
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
K+ GT + S+ AAL AV +L+A+ +L G I YAL RPPGHHA + A GYC+
Sbjct: 93 KVFDTGTPITRNSFFAALNAVSASLNAVDEILTGE-TIVYALCRPPGHHASSSQAGGYCY 151
Query: 167 LNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NNA +A + G V ++D+D H+GNGT E FY + VL +SLH + + P
Sbjct: 152 FNNAAIAARYFQKYTHGYVAILDLDFHHGNGTQEIFYADSTVLYVSLHGDPEKFYPW--I 209
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G E+GE +G GYN N PLP T Y+ + E + I+ F+P+++++ +G D+
Sbjct: 210 SGYDWEIGEEDGVGYNFNFPLPGETTGTDYLRTL-EKALAEIENFDPDLLIVSLGFDTHK 268
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G L Y +G+ ++ L ++++QEGGY
Sbjct: 269 EDPVGHFSLEDKDYYLIGKALKDL-----DFSIVLIQEGGY 304
>gi|398881178|ref|ZP_10636190.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM67]
gi|398190438|gb|EJM77664.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM67]
Length = 341
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGEQTWRSAYWSAQSAVAGAQALLDGE-PAAYALCRPPGHHARAEAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q+ L G +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYVNNAAVAAQV-LRGGFERVAVLDTDMHHGQGIQEIFYDRDDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G GYNLN+P+ +G+ + ++ E+ + A++ F ++VL +G D
Sbjct: 225 --VAGFADERGVGAGEGYNLNLPMAHGSSEADFL-GQLEVALAAVKDFAAEVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +RSL G LIVQEGGYH+
Sbjct: 282 IFELDPQSKVAVTREGFARLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|356565230|ref|XP_003550845.1| PREDICTED: histone deacetylase 15-like [Glycine max]
Length = 547
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 160/313 (51%), Gaps = 18/313 (5%)
Query: 27 NHDTGKGLFDTGFDPGFL---EVLEK---HPENSDRIKNIVSILKRGPISPYISWHSGIP 80
N D GFD L EV +K HPE DR++ I + L R I P + IP
Sbjct: 144 NCDMANSSTAIGFDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPGKCY--SIP 201
Query: 81 AQI---PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHV 137
A+ +L++ H+ ++I + ++ T N S AA LA G +
Sbjct: 202 AREITPEELITVHSLEHIESVEVTSESLSSYFTSDTYANEHSALAARLAAGLCADLASAI 261
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNG 197
+ K +ALVRPPGHHA A G+C NNA +A A +G KV+++D DVH+GNG
Sbjct: 262 VSERAKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNG 321
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGY 256
T E F ++ VL ISLH + G G +P G +E+G GY +NIP G GD Y
Sbjct: 322 TQEIFEQNKSVLYISLHRHEG--GKFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDY 379
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ + +V+P +F P+ ++ G D++ DP G +T GY M ++ +L SG
Sbjct: 380 IFSFQHVVLPIAAEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNAL----SG 435
Query: 317 GRLLIVQEGGYHV 329
G+LL++ EGGY++
Sbjct: 436 GKLLVILEGGYNL 448
>gi|281353654|gb|EFB29238.1| hypothetical protein PANDA_006175 [Ailuropoda melanoleuca]
Length = 1160
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 166/336 (49%), Gaps = 17/336 (5%)
Query: 30 TGKGL-FDTGFDPGFLEVLEKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLL 87
+G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 84 SGTGLVFDEQLNEFHCLWDDSFPECPERLHAIKQQLIQEGLVDRCVSFQARF-AEKEELM 142
Query: 88 SFHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
H+ +YI+ E + G + D L+P S+ A LA G+ L + VL
Sbjct: 143 LVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGNE 202
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ A++RPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 203 IRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHAIQRVLIVDWDVHHGQGTQF 262
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
F R VL S+H G + P H + +G G G GY +N+P G D Y+
Sbjct: 263 AFDRDPSVLYFSIHRYEQGRFWP-HLKASNWSTVGFGRGQGYTINVPWNQVGMRDADYIA 321
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A L++P +F+P ++++ G D+ DP G T G+ ++ ++ LA GG+
Sbjct: 322 AFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGK 377
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
L++ EGGY+ A + A+L +L P +L P
Sbjct: 378 LILSLEGGYNFRSLAEGVSASLHTLLGDPCPILESP 413
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 178/365 (48%), Gaps = 37/365 (10%)
Query: 5 PSEPPS------PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIK 58
P +PP+ P + + +D M+ H L+D HPE R+
Sbjct: 462 PWQPPALPVLTWPVLQARTGLVYDQRMMGH---YNLWDN-----------HHPEMPQRVF 507
Query: 59 NIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDG 112
I+ L+ ++ PA +LL+ H+ +Y+ L K + + D
Sbjct: 508 RIMRRLEELGLAGRCLTLPARPATDSELLTCHSAEYVGRLRATAKMKTRELHREGSNFDS 567
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
+ PG++ A LA G T ++ VL G A+VRPPGHHA+ A G+CF N+ +
Sbjct: 568 IYICPGTFACAQLATGATCRLVEAVLAGEVLNGAAVVRPPGHHAERDAACGFCFFNSVAV 627
Query: 173 AVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGT 229
A + A++ +++++D DVH+GNGT F VL ISLH +HG++ P + G
Sbjct: 628 AARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDE-GA 686
Query: 230 VDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
++G G G+ +N+ NG GD Y+ A LV+P +F P ++++ G D++
Sbjct: 687 SSQMGRAAGTGFTVNVAW-NGPRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARG 745
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP G ++ +GY + ++ LA+ GR++++ EGGY++T + + A +L P
Sbjct: 746 DPLGGCQVSPEGYAHLTHLLMGLAN----GRIILILEGGYNLTSISESMAACTRSLLGDP 801
Query: 348 LALLS 352
LL+
Sbjct: 802 PPLLT 806
>gi|194353997|ref|NP_034543.3| histone deacetylase 6 [Mus musculus]
gi|194353999|ref|NP_001123888.1| histone deacetylase 6 [Mus musculus]
gi|341941079|sp|Q9Z2V5.3|HDAC6_MOUSE RecName: Full=Histone deacetylase 6; Short=HD6; AltName:
Full=Histone deacetylase mHDA2
Length = 1149
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 34/358 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D+ M++H L+D HPE RI I+ L+ ++
Sbjct: 474 PLLQNRTGLVYDEKMMSH---CNLWDN-----------HHPETPQRILRIMCHLEEVGLA 519
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y+ L +K + + D + P ++ A
Sbjct: 520 ARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAK 579
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA--LNSGC 182
LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A +
Sbjct: 580 LATGAACRLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRA 639
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +SLH + G++ P + G ++G G G+
Sbjct: 640 LRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDE-GASSQVGRDAGIGF 698
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+P NG GD Y+ A LV+P +F P ++++ G D++ DP G +T +G
Sbjct: 699 TVNVPW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEG 757
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP---LALLSDP 354
Y + ++ LA GGR++++ EGGY++ + + A +L P L LL P
Sbjct: 758 YAHLTHLLMGLA----GGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 811
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 166/336 (49%), Gaps = 17/336 (5%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE+ +R+ I ++ G + +S+ + A+ +L+
Sbjct: 84 GTGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARF-AEKEELML 142
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ +YI+ E + G V D L+P S+ A LA G+ L + ++
Sbjct: 143 VHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEI 202
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A++RPPGHHAQ + DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 203 RNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFI 262
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHA 259
F + VL S+H HG + P H + +G G+G GY +N+P G D Y+ A
Sbjct: 263 FDQDPSVLYFSIHRYEHGRFWP-HLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAA 321
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G D+ DP G T G+ + ++ LA GG+L
Sbjct: 322 FLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLA----GGKL 377
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
++ EGGY++ A + A+L +L P +L +
Sbjct: 378 ILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCV 413
>gi|328854528|gb|EGG03660.1| hypothetical protein MELLADRAFT_90044 [Melampsora larici-populina
98AG31]
Length = 670
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 25/338 (7%)
Query: 51 PENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC 110
PE RI I++ + + + P++ A +++ H+ + N + + + +
Sbjct: 79 PERPSRITRIMAQVTKAKLIPHLLHVQVRKATKEEIMLVHSEGHWNRIQDTASMDIQELK 138
Query: 111 DGTV--------LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
D +N ++ A L+ G + + V++G + +A+VRPPGHH++P
Sbjct: 139 DRATYYSRLSLFVNAETFDCARLSCGGVIEMCRAVVEGRIRNGFAVVRPPGHHSEPEDPS 198
Query: 163 GYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH--MNH 217
G+C NNA + + ++++ID DVH+GNGT FY VL IS+H + +
Sbjct: 199 GFCVFNNAAVTAKWLRTIYPDKIRRILLIDWDVHHGNGTQRSFYHDPSVLYISIHRYLEN 258
Query: 218 GSWGPSHPQN--GTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPN 274
G +P + G +GEG G GYN+NIP P G GD Y+ A LV+P +F P+
Sbjct: 259 GRTTYFYPGSDWGGSTRIGEGLGRGYNVNIPWPEAGMGDEDYIFAFQRLVMPIAMEFNPD 318
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAY 334
+++ G D++ DP G +T G+ M ++ SLA+ G +++ EGGYH+ A
Sbjct: 319 FVIVSAGFDAAKNDPLGECNVTPAGFALMTHMLSSLAN----GNIVLALEGGYHLESLAL 374
Query: 335 ----CLHATL-EGVLNLPLALLSDPIAYYPEDEAFPVK 367
C+ + E L AL++ +A DE V+
Sbjct: 375 SATECIKVLMGETPPKLEKALVASDVATETVDECLRVQ 412
>gi|94264760|ref|ZP_01288539.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
gi|93454806|gb|EAT05059.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
Length = 349
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFY 203
A+ALVRPPGHHA+ + G+C NN +A A G ++++ D D+H+GNGT F
Sbjct: 116 AFALVRPPGHHAEHDHSSGFCLFNNIAIAAHYARQKLGFKRILIFDWDLHHGNGTQHAFD 175
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
S++VL +S H P P +GT+ E+G G+G GY +N+PLP G D + EL
Sbjct: 176 DSDQVLFLSTHQF-----PCFPGSGTLSEVGRGKGEGYTINVPLPGGQDDAAFARICNEL 230
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
+VP + ++P +I++ G D+ A DP G ++ GY M R++ LA + RL++V
Sbjct: 231 LVPLARAYQPELIMVSAGFDTYAGDPLGSMMVSELGYAYMTRVLTELAAQLCQQRLVLVL 290
Query: 324 EGGYHV 329
EGGY++
Sbjct: 291 EGGYNL 296
>gi|74195299|dbj|BAE28372.1| unnamed protein product [Mus musculus]
Length = 1009
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 34/358 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D+ M++H L+D HPE RI I+ L+ ++
Sbjct: 474 PLLQNRTGLVYDEKMMSH---CNLWDN-----------HHPETPQRILRIMCHLEEVGLA 519
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y+ L +K + + D + P ++ A
Sbjct: 520 ARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAK 579
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA--LNSGC 182
LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A +
Sbjct: 580 LATGAACRLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRA 639
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +SLH + G++ P + G ++G G G+
Sbjct: 640 LRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDE-GASSQVGRDAGIGF 698
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+P NG GD Y+ A LV+P +F P ++++ G D++ DP G +T +G
Sbjct: 699 TVNVPW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEG 757
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP---LALLSDP 354
Y + ++ LA GGR++++ EGGY++ + + A +L P L LL P
Sbjct: 758 YAHLTHLLMGLA----GGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 811
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 159/315 (50%), Gaps = 16/315 (5%)
Query: 51 PENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKAGGK 107
PE+ +R+ I ++ G + +S+ + A+ +L+ H+ +YI+ E + G
Sbjct: 105 PESPERLHAIREQLILEGLLGRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGEL 163
Query: 108 MVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
V D L+P S+ A LA G+ L + ++ + A++RPPGHHAQ + DG
Sbjct: 164 RVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIRNGMAVIRPPGHHAQHNLMDG 223
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
YC N+ +A + A +V+++D DVH+G GT F + VL S+H HG +
Sbjct: 224 YCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFW 283
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P H + +G G+G GY +N+P G D Y+ A +++P +F+P ++++
Sbjct: 284 P-HLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAAFLHILLPVASEFQPQLVLVAA 342
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D+ DP G T G+ + ++ LA GG+L++ EGGY++ A + A+L
Sbjct: 343 GFDALHGDPKGEMAATPAGFAHLTHLLMGLA----GGKLILSLEGGYNLRALAKGVSASL 398
Query: 341 EGVLNLPLALLSDPI 355
+L P +L +
Sbjct: 399 HTLLGDPCPMLESCV 413
>gi|74152172|dbj|BAE32376.1| unnamed protein product [Mus musculus]
Length = 1149
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 34/358 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D+ M++H L+D HPE RI I+ L+ ++
Sbjct: 474 PLLQNRTGLVYDEKMMSH---CNLWDN-----------HHPETPQRILRIMCHLEEVGLA 519
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y+ L +K + + D + P ++ A
Sbjct: 520 ARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAK 579
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA--LNSGC 182
LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A +
Sbjct: 580 LATGAACRLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRA 639
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +SLH + G++ P + G ++G G G+
Sbjct: 640 LRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDE-GASSQVGRDAGIGF 698
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+P NG GD Y+ A LV+P +F P ++++ G D++ DP G +T +G
Sbjct: 699 TVNVPW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEG 757
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP---LALLSDP 354
Y + ++ LA GGR++++ EGGY++ + + A +L P L LL P
Sbjct: 758 YAHLTHLLMGLA----GGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 811
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 166/336 (49%), Gaps = 17/336 (5%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE+ +R+ I ++ G + +S+ + A+ +L+
Sbjct: 84 GTGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARF-AEKEELML 142
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ +YI+ E + G V D L+P S+ A LA G+ L + ++
Sbjct: 143 VHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEI 202
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A++RPPGHHAQ + DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 203 RNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFI 262
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHA 259
F + VL S+H HG + P H + +G G+G GY +N+P G D Y+ A
Sbjct: 263 FDQDPSVLYFSIHRYEHGRFWP-HLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAA 321
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G D+ DP G T G+ + ++ LA GG+L
Sbjct: 322 FLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLA----GGKL 377
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
++ EGGY++ A + A+L +L P +L +
Sbjct: 378 ILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCV 413
>gi|390450359|ref|ZP_10235952.1| histone deacetylase superfamily protein [Nitratireductor
aquibiodomus RA22]
gi|389662707|gb|EIM74264.1| histone deacetylase superfamily protein [Nitratireductor
aquibiodomus RA22]
Length = 341
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 10/225 (4%)
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+AG M ++ +W +A + + + A + V+ G AYAL RPPGHHA A
Sbjct: 108 QAGYHMADTACPISAETWDSACWSAWSAVEASEAVMSG-APAAYALSRPPGHHAFADAAG 166
Query: 163 GYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
G+CF NN+ +A Q L +V ++D+D+H+GNGT FY VLT+S+H + + P
Sbjct: 167 GFCFFNNSAIAAQ-HLRKQAARVAILDVDLHHGNGTQGIFYARPDVLTVSIHADPVRFYP 225
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
G DE GEG+G GYNLN+PLP +GD ++ A+ + I+ F P+ +V+ +G
Sbjct: 226 FF--WGHADERGEGQGLGYNLNLPLPRKSGDEAFLEAL-QPAFRRIRAFAPDALVVALGL 282
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP G ++ G+ M + SL G +IVQEGGY
Sbjct: 283 DAFEGDPFGGLSVSTPGFARMAEAISSL-----GLPSIIVQEGGY 322
>gi|302817308|ref|XP_002990330.1| hypothetical protein SELMODRAFT_131541 [Selaginella moellendorffii]
gi|300141892|gb|EFJ08599.1| hypothetical protein SELMODRAFT_131541 [Selaginella moellendorffii]
Length = 630
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 18/309 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE-ADKAGGK- 107
HPE RI I L+ + PA +L + HT +I ++ + +A GK
Sbjct: 24 HPEQPARITAIWQRLEDAGVLDRCVRVDARPATAEELATVHTERHIEKMSSVSSRAYGKE 83
Query: 108 ------MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
+ N GS +ALLA G+ + V G A A+VRPPGHHA+ A
Sbjct: 84 GRAALARRYNSIYFNDGSSESALLAAGSVVELSLKVARGELASAAAIVRPPGHHAEADEA 143
Query: 162 DGYCFLNNAGLAVQLALN-----SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
G+C NN +A Q+ + +G KV+++D DVH+GNGT F++ VL S+H
Sbjct: 144 MGFCLFNNVAVAAQILSSGKVSVAGSHKVLIVDWDVHHGNGTQNMFWQDPNVLYFSVHRY 203
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNM 275
+ Q G D++G G G G+N+N+P P G D YV +++P ++F P++
Sbjct: 204 DDGYFYPGGQEGNFDKVGGGAGAGFNINVPWPRGGYSDADYVAVWEHVLMPVAREFNPDI 263
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+++ G DS+ DP G LT GY M + + LA GG++++ EGGY++ A
Sbjct: 264 VLISGGFDSARGDPLGGCKLTPLGYSIMTQELMQLA----GGKIVLALEGGYNLESIAES 319
Query: 336 LHATLEGVL 344
A ++ +L
Sbjct: 320 YLACVQVLL 328
>gi|315049039|ref|XP_003173894.1| histone deacetylase clr3 [Arthroderma gypseum CBS 118893]
gi|311341861|gb|EFR01064.1| histone deacetylase clr3 [Arthroderma gypseum CBS 118893]
Length = 796
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 162/323 (50%), Gaps = 31/323 (9%)
Query: 46 VLEKHPENSDRIKNIVSILKR-----------GPISP----YISWHSGIPAQIPQLLSFH 90
L+ HPE+ R+ I L R GP+ P I A+I + +
Sbjct: 167 TLDVHPEDPRRVYYIYRELGRAGLIADGGEFQGPLVPQPLKRIEARDATEAEITLVHTKE 226
Query: 91 TPDYIN---ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYA 147
+++ ++ E + + D N ++ +ALL+ G + K V + K A A
Sbjct: 227 HYEFVKSTKDMSEDELLELEHTRDSIYFNSLTFTSALLSCGGAIETCKAVAEEKVKNAIA 286
Query: 148 LVRPPGHHAQPTMADGYCFLNN---AGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYR 204
++RPPGHHA+ G+C NN A A Q L C K++++D DVH+GNG FY
Sbjct: 287 VIRPPGHHAESNKTMGFCLFNNVSVAARACQHVLGDKCRKILILDWDVHHGNGVQRMFYN 346
Query: 205 SNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTE 262
VL IS+H+ GS+ P + G D GEG G G N+NIP P G GD Y++A E
Sbjct: 347 DPNVLYISIHVYRDGSFYPGGDE-GNWDYCGEGLGLGKNVNIPWPTQGMGDGDYLYAFQE 405
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
+V+P +F+P+++++ G D++A D G +T Y M R++ +LA+ G++ +
Sbjct: 406 VVMPIGYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYSHMTRMLMNLAN----GKVAVC 461
Query: 323 QEGGYH---VTYSAYCLHATLEG 342
EGGY+ ++ SA + TL G
Sbjct: 462 LEGGYNFRSISKSALAVTRTLMG 484
>gi|301764785|ref|XP_002917832.1| PREDICTED: histone deacetylase 6-like [Ailuropoda melanoleuca]
Length = 1207
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 178/365 (48%), Gaps = 37/365 (10%)
Query: 5 PSEPPS------PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIK 58
P +PP+ P + + +D M+ H L+D HPE R+
Sbjct: 509 PWQPPALPVLTWPVLQARTGLVYDQRMMGH---YNLWDN-----------HHPEMPQRVF 554
Query: 59 NIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDG 112
I+ L+ ++ PA +LL+ H+ +Y+ L K + + D
Sbjct: 555 RIMRRLEELGLAGRCLTLPARPATDSELLTCHSAEYVGRLRATAKMKTRELHREGSNFDS 614
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
+ PG++ A LA G T ++ VL G A+VRPPGHHA+ A G+CF N+ +
Sbjct: 615 IYICPGTFACAQLATGATCRLVEAVLAGEVLNGAAVVRPPGHHAERDAACGFCFFNSVAV 674
Query: 173 AVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGT 229
A + A++ +++++D DVH+GNGT F VL ISLH +HG++ P + G
Sbjct: 675 AARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDE-GA 733
Query: 230 VDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
++G G G+ +N+ NG GD Y+ A LV+P +F P ++++ G D++
Sbjct: 734 SSQMGRAAGTGFTVNVAW-NGPRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARG 792
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP G ++ +GY + ++ LA+ GR++++ EGGY++T + + A +L P
Sbjct: 793 DPLGGCQVSPEGYAHLTHLLMGLAN----GRIILILEGGYNLTSISESMAACTRSLLGDP 848
Query: 348 LALLS 352
LL+
Sbjct: 849 PPLLT 853
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 166/336 (49%), Gaps = 17/336 (5%)
Query: 30 TGKGL-FDTGFDPGFLEVLEKHPENSDRIKNIVS-ILKRGPISPYISWHSGIPAQIPQLL 87
+G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 131 SGTGLVFDEQLNEFHCLWDDSFPECPERLHAIKQQLIQEGLVDRCVSFQARF-AEKEELM 189
Query: 88 SFHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
H+ +YI+ E + G + D L+P S+ A LA G+ L + VL
Sbjct: 190 LVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGNE 249
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
+ A++RPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 250 IRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHAIQRVLIVDWDVHHGQGTQF 309
Query: 201 GFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVH 258
F R VL S+H G + P H + +G G G GY +N+P G D Y+
Sbjct: 310 AFDRDPSVLYFSIHRYEQGRFWP-HLKASNWSTVGFGRGQGYTINVPWNQVGMRDADYIA 368
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A L++P +F+P ++++ G D+ DP G T G+ ++ ++ LA GG+
Sbjct: 369 AFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGK 424
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
L++ EGGY+ A + A+L +L P +L P
Sbjct: 425 LILSLEGGYNFRSLAEGVSASLHTLLGDPCPILESP 460
>gi|166366746|ref|YP_001659019.1| histone deacetylase family protein [Microcystis aeruginosa
NIES-843]
gi|166089119|dbj|BAG03827.1| histone deacetylase family protein [Microcystis aeruginosa
NIES-843]
Length = 305
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 36/335 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+I++ + D L+HDTG HPE + R+ IV LK+ ++W
Sbjct: 1 MISIIYSDEFLDHDTGI----------------YHPEKAARLTAIVGALKQTEWQSKLTW 44
Query: 76 HSGIPAQI-----PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTT 130
H P +I P + H +Y++ L + GG + T ++ S+ ALLAV
Sbjct: 45 HLPTPLEIRDEVLPLIKQVHNQNYVDILRRICQQGGGRLDADTPVSARSYDVALLAVSGW 104
Query: 131 LSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL-NSGCGKVVVID 189
L + VL G A+ L RPPGHHA G+C +NA +A AL N KV ++D
Sbjct: 105 LDGVDRVLST-GDPAFILARPPGHHATSNYGMGFCLFSNAAIAAYYALENKRVQKVAILD 163
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
DVH+GNGT + ++ SLH P +P G E GE F LNIPL
Sbjct: 164 WDVHHGNGTQDIVENHPQIAYCSLHQ-----FPFYPGTGEARETGE---FNNVLNIPLSA 215
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G+ + Y V+P ++ F+P+++++ G D++ DP CL Y + + + +
Sbjct: 216 GSTIKDYQEHFEGQVIPFLKNFQPDLVIVSAGYDANQADPLAGICLHPQDYGILTKYLLT 275
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
L LL EGGY + A + ATLE +L
Sbjct: 276 L-----NKPLLFGLEGGYDLEALAASVVATLEALL 305
>gi|156361230|ref|XP_001625421.1| predicted protein [Nematostella vectensis]
gi|156212255|gb|EDO33321.1| predicted protein [Nematostella vectensis]
Length = 369
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 150/285 (52%), Gaps = 20/285 (7%)
Query: 86 LLSFHTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLD 139
LL H+ ++I+++ + + D ++ + ALL+ G TL+A++HV
Sbjct: 65 LLCLHSKEHIDKMKSTQDMKPRDLFNLGEEYDSIYMSKDVYDCALLSCGCTLAAVEHVAT 124
Query: 140 GHGKI------AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDV 192
+RPPGHHA A GYCF NN +A +LA G +++++D D+
Sbjct: 125 NKSSKHSIHINQLFFLRPPGHHADADSAMGYCFFNNVAIAAKLAQQRWGMQRILIVDWDI 184
Query: 193 HYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG- 250
H+GNGT F VL SLH +H ++ P Q D +G+G+G G+N+N+P
Sbjct: 185 HHGNGTQNLFESDPSVLYFSLHRYDHANFYPFSAQ-ANYDIVGKGQGKGFNVNVPWNKSH 243
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
GD Y+ A ++++P +F+P+++++ G DS+ DP G +T +GY + ++ SL
Sbjct: 244 IGDADYIAAFQQILLPIAYEFDPDIVLVSAGFDSARGDPKGYCDITPEGYCHLTNMLMSL 303
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
A GG+++++ EGGY++T A + + +L P L P+
Sbjct: 304 A----GGKVVVILEGGYNITSVAESMCSCTSTLLGDPCPRLDGPM 344
>gi|431802111|ref|YP_007229014.1| histone deacetylase superfamily protein [Pseudomonas putida HB3267]
gi|430792876|gb|AGA73071.1| histone deacetylase superfamily protein [Pseudomonas putida HB3267]
Length = 340
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 15/228 (6%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G+ + DG+ + +W +A + + ++ K +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AGRYLADGSCPVGEHTWRSAYWSAQSAVAGAKAILDGE-PAAYALCRPPGHHARFDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNNA +A Q AL S +V ++D D+H+G G E FY VL +S+H + ++ P
Sbjct: 166 FCYLNNAAVAAQ-ALRSRYSRVAILDTDMHHGQGIQEIFYDRRDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G GYNLN+P+ +G + ++ E+ + A++ F ++VL +G D
Sbjct: 225 --VAGFADERGSGAGEGYNLNLPMAHGASEADFM-GQLEVALAAVKDFGAEVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
DP + +T +G+ +G +R++ RL LIVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTTEGFAVLGERIRAM-------RLPCLIVQEGGYHL 322
>gi|357605690|gb|EHJ64741.1| putative histone deacetylase hda2 [Danaus plexippus]
Length = 1092
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 174/352 (49%), Gaps = 29/352 (8%)
Query: 12 AAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
+E + +D ML H +PG +E E+ +R ++ +L+R P
Sbjct: 489 CSEHPVCYIYDPAMLKHHNV-------CEPGHVECPERIMRIHERHRDF-GLLERVHRLP 540
Query: 72 YISWHSGIPAQIPQLLSFHTPDYINELVE------ADKAGGKMVCDGTVLNPGSWGAALL 125
S A ++L+ HT Y++ L E D + D +P S +A
Sbjct: 541 PRS------AADDEILAVHTEKYLDSLKELSSTKLRDLNAQRKSFDSVYFHPDSLQSAAA 594
Query: 126 AVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGK 184
A G + + VL HG +VRPPGHHA + G+C LNN + + A + G +
Sbjct: 595 AAGAVIQMVDAVLR-HGSGGVCVVRPPGHHADEDVPSGFCLLNNVAVGARHARAAHGLTR 653
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D DVH+GNGT Y ++L IS+H ++GS+ P+ P +G+G G GYN+
Sbjct: 654 IMILDWDVHHGNGTQRITYEDKEILYISIHRYDNGSFFPNSPAADHT-AVGQGRGEGYNI 712
Query: 244 NIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
NIP G GD Y+ AM +V+P ++ P ++++ G D++ DP G +T + Y
Sbjct: 713 NIPWNKRGMGDAEYLSAMCSVVLPVAYEYGPQLVLVSAGFDAAVGDPLGGCKVTPECYGR 772
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
M ++R LA GGR+++ EGGY+VT +Y + + +L PL DP
Sbjct: 773 MTHMLRGLA----GGRVIVCLEGGYNVTSISYAMTMCTKALLGDPLQHQYDP 820
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 51/349 (14%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN----------- 96
+ +PE +R+ ++++ + + + A ++L H+P +
Sbjct: 64 DNYPECPERLISVINRCQELNLIEQCKVYPPRSATREEVLELHSPSVYSMMEGTHQNQDL 123
Query: 97 ELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHA 156
E +E AG D ++P + AL + G TL ++ ++ + A +VRPPGHHA
Sbjct: 124 EYLEELSAGF----DAVYIHPTTHELALSSAGCTLDMVERLVSDELQNAACMVRPPGHHA 179
Query: 157 QPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM- 215
GYC NNA LA AL G +++++D DVH+G T + FY +V+ S+H
Sbjct: 180 MRAEPCGYCIYNNAALAANRALKLGLQRILIVDWDVHHGQATQQMFYDDPRVVYFSIHRY 239
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVP-------- 266
HG++ P+ Q+ +G G+G G+N N+PL N G D Y+ +L++P
Sbjct: 240 EHGAFWPNLRQSD-FPYIGSGQGEGHNFNVPLNNTGMTDADYIAIWHQLLLPMAFEYQPQ 298
Query: 267 ------------AIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
+F P +I++ G D++ D G +T Y + +++ +
Sbjct: 299 LVLVSAGYDAAVGCPEFSPELIIVSAGYDAALGDEKGEMEVTPACYASLLHMLQGVC--- 355
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEG-VLNLPLALLSDPIAYYPEDE 362
R+L++ EGG YCL + EG L L L P A P E
Sbjct: 356 --SRVLVLLEGG-------YCLRSLAEGAALTLRTLLGHAPPALPPLQE 395
>gi|195356208|ref|XP_002044572.1| GM19975 [Drosophila sechellia]
gi|194132203|gb|EDW53825.1| GM19975 [Drosophila sechellia]
Length = 479
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 156/319 (48%), Gaps = 24/319 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA-----D 102
++H E +R ++ + ++ A ++L HT ++ L E D
Sbjct: 127 KEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDD 186
Query: 103 KAGGKMVC--DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ ++ D ++P ++ +LLA G+T+ + H++ G + A++RPPGHHA
Sbjct: 187 ERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVTGKAQNGMAIIRPPGHHAMKAE 246
Query: 161 ADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHG 218
+GYCF NN LA Q AL+ ++++ID DVH+G GT FY +V+ S+H HG
Sbjct: 247 YNGYCFFNNVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHG 306
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTG--DRGYVHAMTELVVPAIQKFEPNMI 276
S+ P H +G G GYN N+PL N TG + Y+ +L++P +F+P +I
Sbjct: 307 SFWP-HLHESDYHAIGSEAGTGYNFNVPL-NATGMTNGDYLAIFQQLLLPVALEFQPELI 364
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCL 336
++ G D++ P G +T Y + + LAD R+ +V EGG YCL
Sbjct: 365 IVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGG-------YCL 413
Query: 337 HATLEGVLNLPLALLSDPI 355
+ EG +LL DP
Sbjct: 414 DSLAEGAALTLRSLLGDPC 432
>gi|423694386|ref|ZP_17668906.1| acetylpolyamine aminohydrolase [Pseudomonas fluorescens SS101]
gi|388000956|gb|EIK62285.1| acetylpolyamine aminohydrolase [Pseudomonas fluorescens SS101]
Length = 344
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 117/224 (52%), Gaps = 21/224 (9%)
Query: 112 GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAG 171
G + G+W AA A L+A + G A+AL RPPGHHA + GYC+LNNA
Sbjct: 117 GAPITAGTWQAAYSAAQVALTAQAAIAHG-AHSAFALCRPPGHHAASDLMGGYCYLNNAA 175
Query: 172 LAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN---- 227
+A Q L+ GC KV ++D+D H+GNGT FY + VL S+H HP+
Sbjct: 176 IAAQAFLDQGCKKVAILDVDYHHGNGTQSIFYERSDVLFTSIH--------GHPEAEFPF 227
Query: 228 --GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G DE GEGEG G+N N PLP G+G + + A+ E I+++ ++IV+ +G D+
Sbjct: 228 FLGYADEHGEGEGAGFNFNYPLPAGSGWQAWSAAL-EQACAEIERYAADIIVVSLGVDTF 286
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + L Y MG + L G L V EGGY V
Sbjct: 287 KDDPISQFKLDSPDYLAMGARIARL-----GKPTLFVMEGGYAV 325
>gi|410898956|ref|XP_003962963.1| PREDICTED: histone deacetylase 6-like [Takifugu rubripes]
Length = 1135
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 170/337 (50%), Gaps = 40/337 (11%)
Query: 10 SPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPI 69
+P+ + +D+ M+ H L+D HPE RI I S + +
Sbjct: 496 APSVATATGLVYDERMMEH---LNLWD-----------RHHPEQPQRISKIFSQHQELGL 541
Query: 70 SPYISWHSGIPAQIP---QLLSFHTPDYINELV--------EADKAGGKMVCDGTVLNPG 118
+ IPA++ +L H+ +++++ E K G + + +N
Sbjct: 542 ---VDRCRSIPARLATEEELCMCHSVQHVHQMRATATMKPRELHKLGDEF--NSIYINNQ 596
Query: 119 SWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL 178
S+ AALLA G S ++ +L G + A+VRPPGHHA+ G+CF N A LA + A
Sbjct: 597 SFQAALLAAGGCFSGVEQILAGQVRNGVAIVRPPGHHAERDFPCGFCFFNTAALAARHAQ 656
Query: 179 NSGCGK---VVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELG 234
V+++D DVH+GNGT F + VL ISLH ++G++ PS ++ D +G
Sbjct: 657 KLSQDAPLHVLILDWDVHHGNGTQHMFEDDDSVLYISLHRYDNGAFFPS-SEDAAPDRVG 715
Query: 235 EGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQ 293
+G GYN+N+ G GD Y+ A +V+P +F P+++++ G D++ DP G
Sbjct: 716 VAKGVGYNVNVAWSRGRMGDSDYLAAFHHVVMPVATEFNPDLVLVSAGFDAARGDPLGGY 775
Query: 294 CLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
+T +GY + + SLA GGRLL++ EGGY+++
Sbjct: 776 HVTPEGYAHLTHQLMSLA----GGRLLLILEGGYNLS 808
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 160/327 (48%), Gaps = 23/327 (7%)
Query: 67 GPISPYISWHSGIPAQI--PQLLSFHTPDYIN------ELVEADKAGGKMVCDGTVLNPG 118
G P ++ H G + +LL H+ Y++ + E + D L+P
Sbjct: 103 GATGPAVTGHQGAAQRSYRKELLLCHSQHYVDLMKSTQTMTEEELHSLSDKYDSIYLHPE 162
Query: 119 SWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA- 177
S+ A++AVG+ L + V+ + +A+VRPPGHHAQ + +G+ NN +A + A
Sbjct: 163 SFSVAVMAVGSVLQLVDQVMTSELRNGFAVVRPPGHHAQKDLPNGFSIFNNVAIAARYAQ 222
Query: 178 LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEG 236
+V+++D DVH+G G F VL S+H GS+ P P++ + +G
Sbjct: 223 TRHSVSRVLIVDWDVHHGQGIQYLFQEDPSVLYFSVHRFEQGSFWPHLPESDS-HFVGSS 281
Query: 237 EGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCL 295
G N+N+P G D Y+ A +L++P +F+P ++++ G D++A D G+ C+
Sbjct: 282 GAEGSNINLPWNKTGMKDADYIAAFQQLLLPVAHEFQPQLVLVCAGFDAAAGDEKGQMCV 341
Query: 296 TMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
+ + ++ SLA+ GRL++ EGGY++ +A A + +L L+ P
Sbjct: 342 RPQCFHILTHMLMSLAE----GRLVLALEGGYNLQSTAEGTAACVRALLGGACPPLATPT 397
Query: 356 AYYPEDEAFPVKVIESIKQYQNDVIPF 382
A P D A + SI Q + + P+
Sbjct: 398 A--PSDSA-----LRSISQTLSALFPY 417
>gi|390338172|ref|XP_003724721.1| PREDICTED: histone deacetylase 6-like [Strongylocentrotus
purpuratus]
Length = 1144
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 164/336 (48%), Gaps = 39/336 (11%)
Query: 50 HPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
HPE +RI I S + G I I + A +L + H D I ++ E K +
Sbjct: 528 HPERPERIARIYSKHQEHGLIDRCIKLETR-EATAEELETCHLADMIGDIKETSKHTARE 586
Query: 109 VCD------------GTVLNP--------------GSWGAALLAVGTTLSAMKHVLDGHG 142
+ D ++P ++ +A +A G TL+ + VL
Sbjct: 587 LIDIQDKFNSTRYSRDIYVHPVMSYLSHILLFVPQDTYLSASVAAGCTLNLVDAVLSNQV 646
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
A +VRPPGHHA +A G+CF NN +A + A N G +V+++D DVH+GNGT
Sbjct: 647 LNAVGIVRPPGHHADSKLASGFCFFNNVAIASKYAQNKYGVKRVLIVDWDVHHGNGTQRL 706
Query: 202 FYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGY 256
F VL ISLH + +G + P P+ G VD++G+G+G GYN+NI G GD Y
Sbjct: 707 FESDPSVLYISLHRHENGMYFPMGPE-GAVDQVGKGDGQGYNVNIGWNTGNKGLMGDAEY 765
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ A +++P +F P ++ + G D++ DP G ++ +GY M ++ S+A G
Sbjct: 766 LAAFHHIIMPLAYQFNPELVFISAGFDAAKGDPLGNCLVSPEGYGHMTHMLSSIA----G 821
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLS 352
GR++ V EGGY++ A + +L P LS
Sbjct: 822 GRVITVLEGGYNLNSIAVSMAMCTRIMLGDPCPDLS 857
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 181/390 (46%), Gaps = 33/390 (8%)
Query: 14 EGIINVFWDDGMLNHD-----TGKGL-FDTGFDPGFLEVLEKH--PENSDRIKNIVSILK 65
+G I+V+ D +L+ TG GL +D F + + +H E +R+ + L+
Sbjct: 77 DGDIDVYMADLVLDDSPPPRPTGTGLVYDDRFKEHYCPIGSEHGKSECPERLTACMEKLQ 136
Query: 66 RGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC------DGTVLNPGS 119
G + + S PA ++LS H+ +Y++ L + + D L S
Sbjct: 137 AGGLVDRCTRVSARPASDEEILSLHSQEYLDTLKRSGTLSPDELKELAQSYDSVFLCNES 196
Query: 120 WGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN 179
+ A LAVG L + V+ G + +A +RP GHH+Q +A+GY +NN L ++A
Sbjct: 197 FEIARLAVGGLLELTEKVVKGELRNGFAFIRPCGHHSQRDIANGYSLVNNIALTAKIART 256
Query: 180 S-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEG 238
+++++D DVH+G G ++ S+H + H + D +GEG G
Sbjct: 257 KLNVERILIVDWDVHHGQGIQYLTQDDPSIMYFSMHRYENTSFWPHLEASNYDHIGEGAG 316
Query: 239 FGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTM 297
GYN+N+P G GD Y+ +L++P +F P ++++ G D++ DP G C++
Sbjct: 317 KGYNVNVPWNKIGMGDAEYLTVFRQLLLPLAYEFNPQLVLVSAGFDAAEGDPKGEMCISP 376
Query: 298 DGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT---YSAYCLHATLEGVLNLPLALLSDP 354
DG+ M + LA G++++ EGGY + SA TL G PL+ +
Sbjct: 377 DGFAHMTHHLMGLAQ----GKVVLGLEGGYSLEALGKSAAMCTRTLLGDSPNPLSQIK-- 430
Query: 355 IAYYPEDEAFPVKVIESIKQYQNDVIPFLK 384
Y D A +E+I + P+ K
Sbjct: 431 ---YVSDNA-----LETIHNVTKALKPYWK 452
>gi|152993099|ref|YP_001358820.1| acetoin utilization protein [Sulfurovum sp. NBC37-1]
gi|151424960|dbj|BAF72463.1| acetoin utilization protein [Sulfurovum sp. NBC37-1]
Length = 307
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 28/325 (8%)
Query: 22 DDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPA 81
D+ L HDTG HPE+ R++ I + P+ + S I
Sbjct: 8 DEIYLEHDTGTA----------------HPESRYRLEAIEKAV--APLKKRLIDVSPISV 49
Query: 82 QIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
L HTP++I + EA + + D T+ + S+ AA AVG + A+ + G
Sbjct: 50 SEKVLELVHTPEHIETVREASQQNRSIDSD-TICSEHSYEAARKAVGAGIVAVDGIKKGE 108
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEG 201
+ A+ VRPPGHHA+P A G+C NN + + A G KV++ID DVH+GNGT +
Sbjct: 109 FERAFCAVRPPGHHARPEHAMGFCLFNNIAITARYAQQQGYKKVMIIDFDVHHGNGTQDT 168
Query: 202 FYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMT 261
FY + V S H ++P G E G G+G GY N + +GD +
Sbjct: 169 FYDDDSVFYFSSH-----QAFAYPGTGMEKERGAGKGEGYTANFLVMPDSGDEELLDIYE 223
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
+ P + F+P++I++ G D DP + +T DG +++ R++ AD L
Sbjct: 224 NDLPPYVSAFQPDIILVSAGYDLHESDPLAQLNVTTDGIQKIVRLILKSADV----PYLF 279
Query: 322 VQEGGYHVTYSAYCLHATLEGVLNL 346
EGGY V + TLE +L +
Sbjct: 280 FLEGGYDVNALGRNVKVTLEEMLTI 304
>gi|288961623|ref|YP_003451933.1| histone deacetylase superfamily protein [Azospirillum sp. B510]
gi|288913903|dbj|BAI75389.1| histone deacetylase superfamily protein [Azospirillum sp. B510]
Length = 309
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 153/317 (48%), Gaps = 33/317 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
+F L HDTG G HPE SDR++ +++ L+ +
Sbjct: 2 FTTLFTHPACLEHDTGLG----------------HPECSDRLRAVLAALETEEFH-MLER 44
Query: 76 HSGIPAQIPQLLSFHTPDYINELV----EADKAGGKMVCDGTVLNPGSWGAALLAVGTTL 131
A + QLL H +I+ ++ E + AG V TV++PGS AAL A G
Sbjct: 45 QEAPRATVEQLLRAHPRSHIDRVLSLIPEVEHAG---VDADTVVSPGSGEAALRAAGAVC 101
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL-AVQLALNSGCGKVVVIDI 190
+A+ V G + A+ VRPPGHHA+ A G+C NNA + A G +V V+D
Sbjct: 102 AAVDAVATGQSRNAFCAVRPPGHHAEREKAMGFCLFNNAAVGAFHARAAHGLQRVAVMDF 161
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG 250
DVH+GNGT + +L S H + P +P G E GE +G +N PLP
Sbjct: 162 DVHHGNGTQDILQHDPDMLYCSTHQS-----PLYPGTGDAGEKGE---YGNCVNAPLPAM 213
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
G + HAMT +++PAI F+P+++++ G D+ + DP L D + R + L
Sbjct: 214 AGSPEFRHAMTHVILPAIDHFKPDLLIISAGFDAHSRDPLAGLHLIDDDFVWATRKLGEL 273
Query: 311 ADRYSGGRLLIVQEGGY 327
A + G R++ V EGGY
Sbjct: 274 ARTHCGARIVSVLEGGY 290
>gi|384221281|ref|YP_005612447.1| hypothetical protein BJ6T_76130 [Bradyrhizobium japonicum USDA 6]
gi|354960180|dbj|BAL12859.1| hypothetical protein BJ6T_76130 [Bradyrhizobium japonicum USDA 6]
Length = 341
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 161/318 (50%), Gaps = 49/318 (15%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA 101
G ++ + PE +DR+ + K + P ++ G A+I H+P+Y++ L EA
Sbjct: 21 GVVKRTTEQPERADRLLKGLKDGKHQLVEP-TTFGQGPRARI------HSPEYLSFLSEA 73
Query: 102 DKA-------GGKMVCD-------GTV------------------LNPGSWGAALLAVGT 129
A G +M+ + GT + PG+W AA A
Sbjct: 74 WDAWTALGDSGPEMIGNIHPVRHAGTYPTHIVGRLGWHTADTAAPIGPGTWAAACAATDV 133
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
++A + V+DG YAL RPPGHHA MA G+CFLNN+ +A L +VV++D
Sbjct: 134 AVTAAQMVMDGE-DATYALCRPPGHHAYRDMAGGFCFLNNSAIAAA-HLRLKHERVVILD 191
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
+DVH+GNGT FY V T+S+H + ++ P G E GEG G G NLNIPL
Sbjct: 192 VDVHHGNGTQGIFYARPDVYTVSIHADPIAYYPY--VWGYAHERGEGPGLGANLNIPLAI 249
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
GTGD GY+ AM ++ AI+ F P +V+ +G D+S DP +T G+R +G+ +
Sbjct: 250 GTGDDGYIQAM-DVARRAIESFAPGALVIALGLDASEHDPLKGLAVTTPGFRRIGQAIAK 308
Query: 310 LADRYSGGRLLIVQEGGY 327
L G + VQEGGY
Sbjct: 309 L-----GLPTVFVQEGGY 321
>gi|338973401|ref|ZP_08628765.1| acetylspermidine deacetylase [Bradyrhizobiaceae bacterium SG-6C]
gi|338233444|gb|EGP08570.1| acetylspermidine deacetylase [Bradyrhizobiaceae bacterium SG-6C]
Length = 309
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 141/280 (50%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ I L P + + + A + + H+ +YI+EL G +
Sbjct: 20 HPERPDRLRAIEQGLSAEPFTNLVRVEAP-EADLDVVALCHSNEYIDELRHIAPKDGIVY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W AAL A G ++A+ V+ A+ RPPGHHA+ + G+CF +
Sbjct: 79 LDGDTSMSPGTWEAALRATGGAVAAVDAVMKNKRTNAFVGTRPPGHHAETSKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
+A +A + A G + V+D DVH+GNG+ E F+ V+ S H P P
Sbjct: 139 SAAIAARYAQRKYGIERACVVDFDVHHGNGSQEIFWADPTVMYASTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL G G R + A ++P ++ F P +IV+ G D+
Sbjct: 194 GATQERGDQDTV---VNAPLRPGNGGREFREAFDLAILPRLEAFAPELIVISAGFDAHWR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP G L + + + R + +AD+ + GR++ V EGGY
Sbjct: 251 DPLGSLELREEDFAWVTRKLMEIADKSAEGRIVSVLEGGY 290
>gi|347735968|ref|ZP_08868723.1| histone deacetylase superfamily [Azospirillum amazonense Y2]
gi|346920672|gb|EGY01683.1| histone deacetylase superfamily [Azospirillum amazonense Y2]
Length = 309
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 148/315 (46%), Gaps = 27/315 (8%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
L H+TG G HPEN R+ ++ L Y+ A + Q
Sbjct: 12 LEHETGPG----------------HPENPGRLSAVLRALDAERFQ-YLDRRQAPRATLDQ 54
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKI 144
+ HTPD + L + G + DG TVL+PGS+ AAL A G +A+ V+ G +
Sbjct: 55 IERVHTPDLVTRLQASIPITGIVSLDGDTVLSPGSFEAALHAAGAVCAAVDAVMAGEVRN 114
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFY 203
A+ +RPPGHHA+P + G+C NN G+ + A G +V ++D DVH+GNG+
Sbjct: 115 AFCAIRPPGHHAEPGQSMGFCLFNNVGIGAEHARFAHGLRRVAIVDFDVHHGNGSQTLAE 174
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
+ S H W P +P G + + G+ +G +N+ L G+ + MT
Sbjct: 175 HDPDLFYGSTH----EW-PLYPGTGALGDRGD---YGTVVNVLLRAGSTGAEFRAGMTSR 226
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
++PA+ F P +I + G D+ DP L D + + ++ADR+ GRL+
Sbjct: 227 LLPALDAFAPELIFISAGFDAHRADPLADLALVEDDFAWATAEIAAIADRHCRGRLVSSL 286
Query: 324 EGGYHVTYSAYCLHA 338
EGGY A C+ A
Sbjct: 287 EGGYDPAALASCVAA 301
>gi|347757580|ref|YP_004865142.1| histone deacetylase domain-containing protein [Micavibrio
aeruginosavorus ARL-13]
gi|347590098|gb|AEP09140.1| histone deacetylase domain protein [Micavibrio aeruginosavorus
ARL-13]
Length = 309
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 10/298 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +R++ I +L P ++ PA Q+ H Y+ + +A G +
Sbjct: 21 HPERIERLQAIFDLLSESPFDTLPQINAD-PASFKQITRAHPESYVMRIEDAIPDRGLVH 79
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D TV++P S AA A G +A + V++G + A+ RPPGHHA+PT A G+C N
Sbjct: 80 LDADTVISPASIDAAFEAAGAACTAARDVMNGTTRRAFCAARPPGHHAEPTHAMGFCLFN 139
Query: 169 NAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNG 228
N LA A G +V +ID DVH+GNG+ + + VL IS+H + S P + G
Sbjct: 140 NIFLAALEAQQHGAKRVAIIDFDVHHGNGSEVMARKHDNVLFISMHQD--SLFPD-GRGG 196
Query: 229 TVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFD 288
D+ + +N+PL G G Y AMT V+PA++ ++P++I++ G D+ D
Sbjct: 197 ATDQTPD-----RVINVPLQAGAGTHEYRTAMTGTVIPALEAYKPDLILISAGFDAHRDD 251
Query: 289 PNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNL 346
P G L Y + R + ADR GR++ V EGGY++ A L + +L
Sbjct: 252 PLGGMMLLDSDYDWITRDLCDAADRLCEGRVISVMEGGYNLDALKTSARAHLLALADL 309
>gi|6978316|gb|AAD09835.2| histone deacetylase mHDA2 [Mus musculus]
Length = 1149
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 34/358 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D+ M++H L+D HPE RI I+ L+ ++
Sbjct: 474 PLLQNRTGLVYDEKMMSH---CNLWDN-----------HHPETPQRILRIMCHLEEVGLA 519
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y+ L +K + + D + P ++ A
Sbjct: 520 ARCLILPARPALGSELLTCHSAEYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAK 579
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA--LNSGC 182
LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A +
Sbjct: 580 LATGAACRLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRA 639
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +SLH + G++ P + G ++G G G+
Sbjct: 640 LRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDE-GASSQVGRDAGIGF 698
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+P NG GD Y+ A LV+P +F P ++++ G D++ DP G +T +G
Sbjct: 699 TVNVPW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEG 757
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP---LALLSDP 354
Y + ++ LA GGR++++ EGGY++ + + A +L P L LL P
Sbjct: 758 YAHLTHLLMGLA----GGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 811
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 166/336 (49%), Gaps = 17/336 (5%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE+ +R+ I ++ G + +S+ + A+ +L+
Sbjct: 84 GTGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQAWF-AEKEELML 142
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ +YI+ E + G V D L+P S+ A LA G+ L + ++
Sbjct: 143 VHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEI 202
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A++RPPGHHAQ + DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 203 RNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFI 262
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHA 259
F + VL S+H HG + P H + +G G+G GY +N+P G D Y+ A
Sbjct: 263 FDQDPSVLYFSIHRYEHGRFWP-HLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAA 321
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G D+ DP G T G+ + ++ LA GG+L
Sbjct: 322 FLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLA----GGKL 377
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
++ EGGY++ A + A+L +L P +L +
Sbjct: 378 ILSLEGGYNLRALAKGISASLHTLLGDPCPMLESCV 413
>gi|56751977|ref|YP_172678.1| acetylpolyamine aminohydolase [Synechococcus elongatus PCC 6301]
gi|56686936|dbj|BAD80158.1| acetylpolyamine aminohydolase [Synechococcus elongatus PCC 6301]
Length = 323
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 161/342 (47%), Gaps = 33/342 (9%)
Query: 12 AAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
A G + + + D L+HDTG G HPE +R+ V+ L+ P S
Sbjct: 6 ALSGRLPIVYSDRFLDHDTGLG----------------HPERPERLSATVTHLRSQPWST 49
Query: 72 YISWHS----GIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAV 127
+ W+ + +P + + H+ YI+ + + GG + T + S+ ALLAV
Sbjct: 50 ALDWYLPTDLATRSPLPWIETCHSLHYIDSVQHLAERGGGSLDPDTPCSAASYEVALLAV 109
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
L + +L + A+AL RPPGHHA T G+C NA +A + AL G KV +
Sbjct: 110 NVWLDGIDRLLTRQSQAAFALTRPPGHHALATHGMGFCLFGNAAIAARYALAQGLTKVAI 169
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
+D DVH+GNGT + + +SLH + P++P G+ E G E N+PL
Sbjct: 170 VDWDVHHGNGTQALVEQQPAIAYVSLHQS-----PAYPGTGSASETGFYENVR---NLPL 221
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
P G+ + Y +V+P ++ ++P ++++ G D++A DP L Y + + +
Sbjct: 222 PPGSDGQDYRQCFETIVLPFLRAWQPQLLIVSAGYDAAAADPLANMRLQPADYGALTQQL 281
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
RSL +L EGGY + + + ATL L P A
Sbjct: 282 RSLQI-----PILFGLEGGYDLPALSASVAATLAACLEPPSA 318
>gi|81300933|ref|YP_401141.1| acetylpolyamine aminohydolase [Synechococcus elongatus PCC 7942]
gi|81169814|gb|ABB58154.1| acetylpolyamine aminohydolase [Synechococcus elongatus PCC 7942]
Length = 323
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 161/342 (47%), Gaps = 33/342 (9%)
Query: 12 AAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISP 71
A G + + + D L+HDTG G HPE +R+ V+ L+ P S
Sbjct: 6 ALSGRLPIVYSDRFLDHDTGLG----------------HPERPERLSATVTHLRSQPWST 49
Query: 72 YISWHS----GIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAV 127
+ W+ + +P + + H+ YI+ + + GG + T + S+ ALLAV
Sbjct: 50 ALDWYLPTDLATRSPLPWIETCHSLHYIDSVQHLAERGGGSLDPDTPCSAASYEVALLAV 109
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
L + +L + A+AL RPPGHHA T G+C NA +A + AL G KV +
Sbjct: 110 NAWLDGIDRLLTRQSQAAFALTRPPGHHALATHGMGFCLFGNAAIAARYALAQGLTKVAI 169
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL 247
+D DVH+GNGT + + +SLH + P++P G+ E G E N+PL
Sbjct: 170 VDWDVHHGNGTQALVEQQPAIAYVSLHQS-----PAYPGTGSASETGFYENVR---NLPL 221
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
P G+ + Y +V+P ++ ++P ++++ G D++A DP L Y + + +
Sbjct: 222 PPGSDGQDYRQCFETIVLPFLRAWQPQLLIVSAGYDAAAADPLANMRLQPADYGALTQQL 281
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLA 349
RSL +L EGGY + + + ATL L P A
Sbjct: 282 RSLQI-----PILFGLEGGYDLPALSASVAATLAACLEPPSA 318
>gi|403297488|ref|XP_003939594.1| PREDICTED: histone deacetylase 6 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403297490|ref|XP_003939595.1| PREDICTED: histone deacetylase 6 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403297492|ref|XP_003939596.1| PREDICTED: histone deacetylase 6 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1213
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 169/335 (50%), Gaps = 16/335 (4%)
Query: 51 PENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKAGGK 107
PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E + K G
Sbjct: 106 PEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMKEGEL 164
Query: 108 MVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
V D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++ DG
Sbjct: 165 RVLADTYDSVYLHPNSYSCACLATGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDG 224
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
YC N+ +A + A +V+++D DVH+G GT F + VL S+H G +
Sbjct: 225 YCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFW 284
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P H + G G+G GY +N+P G D Y+ A +++P +F+P ++++
Sbjct: 285 P-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAA 343
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D+ DP G T G+ ++ ++ LA GG+L++ EGGY++ A + A+L
Sbjct: 344 GFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGKLILSLEGGYNLRALAEGVSASL 399
Query: 341 EGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
+L P +L P A +A +E+++ +
Sbjct: 400 HTLLGDPCPMLESPGAPCRSAQASVSCALEALEPF 434
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 167/343 (48%), Gaps = 37/343 (10%)
Query: 5 PSEPPS------PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIK 58
P EPP P + + +D M+NH L+D+ HPE RI
Sbjct: 463 PWEPPVLPILTWPVLQFRTGLVYDQSMMNH---CNLWDS-----------HHPEVPQRIL 508
Query: 59 NIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDG 112
I+ L+ ++ PA +L + H+ +YI L +K + + D
Sbjct: 509 RIMCRLEELGLAGRCLTLPPRPATEAELFTCHSAEYIARLRATEKMKTRELHRESSNFDS 568
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
+ P ++ A LA G ++ VL G A+VRPPGHHA+ A G+CF N+ +
Sbjct: 569 IYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAV 628
Query: 173 AVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGT 229
A + A++ +++++D DVH+GNGT F VL +SLH +HG++ P + G
Sbjct: 629 AARHAQAISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDE-GA 687
Query: 230 VDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
++G G G+ +N+ NG GD Y+ A LV+P +F P ++++ G D++
Sbjct: 688 SSQIGRAAGTGFTVNVAW-NGPRIGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARG 746
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
DP G ++ +GY + ++ LA GR++++ EGGY++T
Sbjct: 747 DPLGGCQVSPEGYAHLTHLLMGLAS----GRIILILEGGYNLT 785
>gi|163859208|ref|YP_001633506.1| acetylpolyamine aminohydrolase [Bordetella petrii DSM 12804]
gi|163262936|emb|CAP45239.1| acetylpolyamine aminohydrolase [Bordetella petrii]
Length = 337
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + P +W +A + + ++ +L G + AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGPSTWHSAYWSAQSAVAGADALLAG-DRHAYALCRPPGHHARRDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNN +A Q L +V V+D D+H+G G E FY + V +S+H + ++ P
Sbjct: 166 FCYLNNCAIAAQR-LRGKYARVAVLDTDMHHGQGIQEIFYERDDVYYVSIHGDPENFYPV 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G +E G G GFGYNLN+P+P+G+ + + + ++ V AIQ F+P+++VL +G D
Sbjct: 225 --VAGYDNEKGAGRGFGYNLNLPMPHGSPESVFFDKL-DIAVNAIQVFQPDVLVLALGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + ++ G+ +GR V S G +L+VQEGGY++
Sbjct: 282 IFERDPQAKVAVSSAGFERIGRAVASF-----GVPVLVVQEGGYYI 322
>gi|302342023|ref|YP_003806552.1| histone deacetylase superfamily protein [Desulfarculus baarsii DSM
2075]
gi|301638636|gb|ADK83958.1| histone deacetylase superfamily [Desulfarculus baarsii DSM 2075]
Length = 344
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 149/327 (45%), Gaps = 22/327 (6%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + DD L H TG HPE+ R+ + +L +I
Sbjct: 4 VQIVRDDRYLRHKTGL----------------SHPESPARLSAVYRMLDWDHPGGFIE-K 46
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKH 136
P + L HTP Y+ ++ + + T+ + S AA LA G + +
Sbjct: 47 QARPITLEDLERVHTPAYVRIILATARQRLTHLAPDTIASRDSCLAAWLAAGGCVLGVDD 106
Query: 137 VLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGN 196
+L G + L RPPGHHA A G+C NN GLA + AL G +V+++D D+H+GN
Sbjct: 107 LLAGRCQACLVLCRPPGHHALADRAGGFCIFNNLGLAARHALRRGLRRVLIVDWDIHHGN 166
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
FY ++V+ +S H+ + ++P G + E+G G G G+ +N+PLP GD
Sbjct: 167 ALQNLFYADDRVVYLSTHLPN-----AYPFTGKLGEVGVGPGAGHTINLPLPPKWGDNDA 221
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
+ ++ +++F P MI++ G D+ DP G T Y + ++V +L R +
Sbjct: 222 MTLYRVVLEQLVERFSPEMIMVACGFDAHFRDPIGATLQTEASYAGLAQLVATLGPRNND 281
Query: 317 GRLLIVQEGGYHVTYSAYCLHATLEGV 343
LL+ EGGY C+ L +
Sbjct: 282 IPLLLALEGGYDPDTLTACVAEVLAAL 308
>gi|307212499|gb|EFN88230.1| Histone deacetylase 6 [Harpegnathos saltator]
Length = 1136
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 18/313 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
HPE RI +I + + G A I +L H+ DYI+ +L E
Sbjct: 504 HPEKPTRISSIYRNHEEYNLLERCYLLHGRCATIEELSLVHSKDYIDSIKSIMTLKLKEL 563
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
DK + + +W +A ++VG+ L + VL+G + A+VRPPGHHA+ A
Sbjct: 564 DKEAAGY--NSVYFHNETWSSACISVGSLLQIVDAVLNGESQSGVAIVRPPGHHAEEDAA 621
Query: 162 DGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
G+C NN +A + A+ KV+++D DVH+GNGT F KVL S+H ++GS
Sbjct: 622 CGFCIFNNVAVAAKYAIQFHHVKKVLIVDWDVHHGNGTQAIFEEDPKVLYTSVHRYDNGS 681
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ PS ++ +G G G+N+N+P G GD Y+ A ++++P +F P ++++
Sbjct: 682 FFPS-SKDANYTSVGLNAGEGFNVNVPWNKKGMGDVEYIAAFQQVIMPIAYQFNPELVLI 740
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D+ DP G + Y + + SLA+ GR+++ EGGY++ ++ +
Sbjct: 741 SAGFDACVGDPLGGCHTNPELYGHLTHWLSSLAN----GRVILSLEGGYNINSISHAMTM 796
Query: 339 TLEGVLNLPLALL 351
+ +L PL +L
Sbjct: 797 CTKALLGDPLPML 809
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 120/218 (55%), Gaps = 8/218 (3%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D ++P ++ +LLA G+T++ ++ + G + A+VRPPGHHA + GYCF NN
Sbjct: 151 DSIYVHPSTYRLSLLATGSTINLIESICKGKVQNGMAIVRPPGHHAMKSEYCGYCFFNNV 210
Query: 171 GLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
LA + AL S K++++D DVH+G T + FY +V+ S+H +G + P+ +
Sbjct: 211 ALAAEKALTSNWASKILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEYGEFWPN-LRES 269
Query: 229 TVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+GE G G+N NIPL G + Y+ ++++P +F+P+++++ G D++
Sbjct: 270 DFHNVGEDLGEGFNFNIPLNKTGMTNADYIAVFQQILLPMAYEFQPDLVIVSAGYDAALG 329
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P G +T Y + + SLA G++ ++ EG
Sbjct: 330 CPEGEMLVTPACYSHLLSSLLSLA----AGKVAVLLEG 363
>gi|254455760|ref|ZP_05069189.1| histone deacetylase family protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082762|gb|EDZ60188.1| histone deacetylase family protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 309
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 32/309 (10%)
Query: 23 DGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQ 82
D NH+TG+G HPE DR+ ++ K+ I W
Sbjct: 9 DTYQNHNTGEG----------------HPEKIDRVTAVIDNFKKLDNKNLI-WKKPTNFD 51
Query: 83 IPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
+ L+ H+ DYIN++ ++ G DG TV++PGS A AVG+ L+A++ V +
Sbjct: 52 LDLLIKTHSLDYINQVQKSFPQNGFNFLDGDTVVSPGSKDATKDAVGSILAAIEGVQNKD 111
Query: 142 GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAE 200
K A+ VRPPGHHA+ A G+C NN + + K+ +ID DVH+GNGT +
Sbjct: 112 FKNAFCAVRPPGHHAEKEKAMGFCIYNNVAVGANYLIEKYKYNKIAIIDFDVHHGNGTQD 171
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYN--LNIPLPNGTGDRGYVH 258
FY + KVL IS H P +P +G+ E G+ YN NIPL GT Y++
Sbjct: 172 IFYDNEKVLYISTHQ-----YPYYPGSGSEKEKGK-----YNNIFNIPLEAGTTAVEYLN 221
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A E V+ +++F+P ++ G D+ DP + L+ + + + + ++ + G
Sbjct: 222 AY-EHVLNKLKEFKPEFLLFSAGFDAHIDDPLAQLRLSSEDFYTLTKRTLEISKPFCNGN 280
Query: 319 LLIVQEGGY 327
++ + EGGY
Sbjct: 281 VVSILEGGY 289
>gi|374632284|ref|ZP_09704658.1| deacetylase, histone deacetylase/acetoin utilization protein
[Metallosphaera yellowstonensis MK1]
gi|373526114|gb|EHP70894.1| deacetylase, histone deacetylase/acetoin utilization protein
[Metallosphaera yellowstonensis MK1]
Length = 350
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 162/305 (53%), Gaps = 14/305 (4%)
Query: 80 PAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVL 138
P + L H+P+Y++ + + G ++ G T G + +AL+ V +++ ++ +
Sbjct: 51 PPEEDILTEVHSPEYVDFVRAMSELGEGLLDYGDTPAFKGVYESALMRVMGSVTGIRLLA 110
Query: 139 DGHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNG 197
G+ +++ G HHAQ + A G+C N+ +AV+ A G+V V+DID H+G+G
Sbjct: 111 RGYD---HSVNLGGGLHHAQRSAASGFCVFNDVAIAVKQA-EKLLGRVAVVDIDGHHGDG 166
Query: 198 TAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYV 257
T Y K L +SLHM H + P G +DE+GEGEG G +N+PLP GTGD Y+
Sbjct: 167 TQALLYEDPKSLKVSLHMYHRGF---FPGTGNIDEIGEGEGRGLTVNVPLPPGTGDDAYL 223
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+A +V+PA++KF+P++IV+ G DS DP L+ GY E+ + + S + S G
Sbjct: 224 YAFDNVVIPALEKFKPDIIVIQEGGDSHMSDPLVGLKLSTRGYLEVIKRIHSFSHNKSTG 283
Query: 318 RLLIVQEGGYHVTYSAYCL---HATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
++L++ GGY +A A L G+ + + L D AF ++ + + +
Sbjct: 284 KILMLGGGGYDYDATARVWTISTAELSGIDPMEVESLHD--CCLTSSSAFVMERVREVVK 341
Query: 375 YQNDV 379
D+
Sbjct: 342 KLRDI 346
>gi|27377345|ref|NP_768874.1| acetylpolyamine aminohydrolase [Bradyrhizobium japonicum USDA 110]
gi|27350489|dbj|BAC47499.1| aph [Bradyrhizobium japonicum USDA 110]
Length = 341
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 155/318 (48%), Gaps = 49/318 (15%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEA 101
G ++ + PE +DR+ + K + P ++ G A+I H+P+Y++ L EA
Sbjct: 21 GVVKRTTEQPERADRLLKGLKDGKHQLVEP-TTFGQGPRARI------HSPEYLSFLSEA 73
Query: 102 --------------------------------DKAGGKMVCDGTVLNPGSWGAALLAVGT 129
K G + PG+W AA A
Sbjct: 74 WDAWTALGDSGPEMIGNIHPVRHAATYPTHIVGKLGWHTADTAAPIGPGTWAAACAATDV 133
Query: 130 TLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVID 189
++A + V+DG YAL RPPGHHA MA G+CFLNN+ +A L +VV++D
Sbjct: 134 AVTAAQMVMDGE-DATYALCRPPGHHAYRDMAGGFCFLNNSAIAAA-HLRLKHERVVILD 191
Query: 190 IDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN 249
+DVH+GNGT FY V T+S+H + ++ P G E GEG G G NLNIPL
Sbjct: 192 VDVHHGNGTQGIFYARPDVYTVSIHADPVAYYPY--VWGYAHERGEGPGLGTNLNIPLAI 249
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
GTGD GY+ AM ++ AI+ F P +V+ +G D+S DP +T G+R +G+ +
Sbjct: 250 GTGDDGYIQAM-DVARKAIESFAPGALVIALGLDASEHDPLKGLAVTTPGFRRIGQAIAR 308
Query: 310 LADRYSGGRLLIVQEGGY 327
+ G + VQEGGY
Sbjct: 309 M-----GLPTVFVQEGGY 321
>gi|440912760|gb|ELR62301.1| Histone deacetylase 6, partial [Bos grunniens mutus]
Length = 1151
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 172/341 (50%), Gaps = 18/341 (5%)
Query: 51 PENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM- 108
PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ L+E + +
Sbjct: 128 PERPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYID-LMETTQYMNEEE 185
Query: 109 ------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
D L+P S+ A LA G+ L + VL+ + A++RPPGHHAQ ++ D
Sbjct: 186 LHVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMD 245
Query: 163 GYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
GYC N+ +A + A +V+++D DVH+G G F + VL S+H G +
Sbjct: 246 GYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRF 305
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P H + G G+G GY +N+P G D Y+ A +++P +F+P ++++
Sbjct: 306 WP-HLKASNWSTTGLGQGQGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVA 364
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G D+ DP G T G+ ++ ++ LA+ G+L++ EGGY++ A + AT
Sbjct: 365 AGFDALQGDPKGEMAATPAGFAQLTHLLMGLAE----GKLILSLEGGYNLHSLAEGVSAT 420
Query: 340 LEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVI 380
L +L P +L P A P +A +E+++ + ++
Sbjct: 421 LHTLLGDPCPVLESPGAPCPSAQASLSCTLEALEPFWESLV 461
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 31/381 (8%)
Query: 6 SEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILK 65
S P P + + +D M++H L+D HPE RI I+ L
Sbjct: 493 SVPIWPVLQARTGLVYDQQMMDH---HNLWDN-----------YHPEMPQRIHFIMHHLD 538
Query: 66 RGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGS 119
++ PA +LL+ H+ +++ L +K + + D + +
Sbjct: 539 ELGLAKRCHSLPARPATDAELLTCHSAEHLERLRATEKMKTRELRREGANYDSIYICSST 598
Query: 120 WGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ--LA 177
+ A LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A
Sbjct: 599 FACAQLAAGAACRLVEAVLAGEVLNGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQA 658
Query: 178 LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEG 236
++ +++++D D+H+GNGT F VL ISLH +HG++ P G +G+
Sbjct: 659 ISGHALRILIVDWDIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPM-GNEGACTRIGKA 717
Query: 237 EGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
G G+ +N+ NG GD Y+ A LV+P +F P ++++ G D++ DP G
Sbjct: 718 TGTGFTVNVAW-NGPRMGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQ 776
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
++ +GY + + LA+ G ++++ EGGY++T + + A +L PL LL+
Sbjct: 777 VSPEGYAHLTHQLMGLAN----GHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTRL 832
Query: 355 IAYYPEDEAFPVKVIESIKQY 375
+A K I+ ++Y
Sbjct: 833 RPPLSGAQASITKTIQVHRRY 853
>gi|423017760|ref|ZP_17008481.1| histone deacetylase domain-containing protein 2 [Achromobacter
xylosoxidans AXX-A]
gi|338779128|gb|EGP43581.1| histone deacetylase domain-containing protein 2 [Achromobacter
xylosoxidans AXX-A]
Length = 339
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 130/228 (57%), Gaps = 15/228 (6%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + P +W +A + ++ + G + AYA+ RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGPHTWHSAYWSAQCAIAGADRIAAG-DRHAYAICRPPGHHARRDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNNA +A Q L G+V ++D D+H+G G + FY + VL +S+H + ++ P
Sbjct: 166 FCYLNNAAIAAQR-LRDTFGRVAILDTDMHHGQGIQDIFYERSDVLYVSIHGDPENFYPV 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G GEG+GYNLN+P+P+G+ + + + E AI++F P+ +VL +G D
Sbjct: 225 --VAGFEDERGAGEGYGYNLNLPMPHGSPESVFFDRLRE-ARAAIEQFRPDALVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
DP +T DG+ +GR V +G +L LIVQEGGY++
Sbjct: 282 IFEKDPQAMVAVTEDGFERLGREV-------AGLKLPTLIVQEGGYYI 322
>gi|339486998|ref|YP_004701526.1| histone deacetylase superfamily protein [Pseudomonas putida S16]
gi|338837841|gb|AEJ12646.1| histone deacetylase superfamily protein [Pseudomonas putida S16]
Length = 340
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 130/228 (57%), Gaps = 15/228 (6%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G+ + DG+ + +W +A + + ++ K +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AGRYLADGSCPVGEHTWRSAYWSAQSAVAGAKAILDGE-PAAYALCRPPGHHARFDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q AL S +V ++D D+H+G G E FY VL +S+H + ++ P
Sbjct: 166 FCYINNAAVAAQ-ALRSRYSRVAILDTDMHHGQGIQEIFYDRRDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G GYNLN+P+ +G + ++ E+ + A++ F ++VL +G D
Sbjct: 225 --VAGFADERGSGAGEGYNLNLPMAHGASEADFM-GQLEIALAAVKDFGAEVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
DP + +T +G+ +G +R++ RL LIVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTTEGFAVLGERIRAM-------RLPCLIVQEGGYHL 322
>gi|319784013|ref|YP_004143489.1| histone deacetylase superfamily protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317169901|gb|ADV13439.1| histone deacetylase superfamily [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 342
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 10/225 (4%)
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+AG M ++ +W +AL + + + A + V+ G AYAL RPPGHHA +A
Sbjct: 107 QAGYHMADTACPISGETWQSALWSAWSAVDAAEAVISG-APAAYALCRPPGHHAFADVAG 165
Query: 163 GYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
G+CF+NN+ +A Q+ L +V ++D+D+H+GNGT FY VLT+SLH + + P
Sbjct: 166 GFCFINNSAVAAQV-LRKQAARVAILDVDLHHGNGTQGIFYARPDVLTVSLHADPVRFYP 224
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
G DE GEG G GYN N+PLP + D ++ A+ E I+ F P+ +V+ +G
Sbjct: 225 FF--WGHADERGEGPGLGYNFNLPLPRKSADAAFLEAL-ETAFQRIRAFSPDALVVALGL 281
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP G +T G+ +G + L +IVQEGGY
Sbjct: 282 DAFEGDPFGGLSVTTPGFSRIGEAIAKL-----DLPTVIVQEGGY 321
>gi|398944573|ref|ZP_10671352.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM41(2012)]
gi|398158146|gb|EJM46507.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM41(2012)]
Length = 344
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 158/347 (45%), Gaps = 55/347 (15%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPI------ 69
++ VF D L+H G L D P F + P +D +++ V ++ G I
Sbjct: 1 MLTVFSDSHRLHH--GTELKDGVLKPSF-----EQPSRADTVRDRVRHVELGDIIVPRTF 53
Query: 70 ----------SPYISW--------------HSGIPAQIP--QLLSFHTPDYINELVEADK 103
Y+S+ H +P P L + PD+I+ K
Sbjct: 54 DRACYVNAHSERYVSFLETAWSEWTATGREHDALPLVWPVRDLSNEQVPDFID-----GK 108
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G + G+ + +W A + L+ + + +G A+AL RPPGHHA G
Sbjct: 109 LGFFAMDAGSPITATTWEAVKTSADIALTGLSLINEGQNS-AFALCRPPGHHAAREYMGG 167
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
YC+LNNA +A Q AL G +V V+D+D H+GNGT FY N V+ +SL HG S
Sbjct: 168 YCYLNNAAIAAQHALTQGAKRVAVLDVDFHHGNGTQNIFYNRNDVMFVSL---HGEPSVS 224
Query: 224 HP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P +G E G G G GYNLN PLP T + Y +A+ ++ F P ++V+ +G
Sbjct: 225 YPYYSGFSSECGTGAGEGYNLNYPLPKNTTWQSYQNALIH-ACKKLRSFAPELLVISLGV 283
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
D+ DP L D + MG I+ S+ G L V EGGY V
Sbjct: 284 DTFKDDPISHFLLESDDFFGMGEIIASV-----GAPTLFVMEGGYMV 325
>gi|344940653|ref|ZP_08779941.1| histone deacetylase superfamily [Methylobacter tundripaludum SV96]
gi|344261845|gb|EGW22116.1| histone deacetylase superfamily [Methylobacter tundripaludum SV96]
Length = 310
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 137/282 (48%), Gaps = 12/282 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR+++I L S I + + Q+ H +I+ ++EA G+
Sbjct: 20 HPECPDRLRSIEKALSAPEFSGLIRQSPPLGTE-RQIRLIHPQFHIDAILEAIPEQGEHY 78
Query: 110 CD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D TVL+PGS AA AVG A+ VL G A+ VRPPGHHA+P +A G+C N
Sbjct: 79 LDHDTVLSPGSKQAAFRAVGAVCDAVDKVLTGKADNAFCAVRPPGHHAEPQLAMGFCLFN 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A A ++ ++D DVH+GNGT FY VL S H G HP
Sbjct: 139 NIAIAANYARQQYQLERIAIVDFDVHHGNGTQAAFYNQPNVLYASSHEMPHYPGTGHPAE 198
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G G +N+PL G + +++PA++ F+P ++++ G D+
Sbjct: 199 ---------TGVGNIINVPLAAGDSGIEFRQKYAHIILPALKIFKPELLLVSAGFDAHKD 249
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP L D ++ + + + S+AD GR++ EGGY++
Sbjct: 250 DPLASIMLVEDDFKWVTQELMSVADHCCKGRVISALEGGYNL 291
>gi|417413582|gb|JAA53111.1| Putative histone deacetylase complex catalytic component hda1,
partial [Desmodus rotundus]
Length = 1165
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 175/353 (49%), Gaps = 31/353 (8%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D M++H L+D HPE R+ I+ L+ ++
Sbjct: 488 PVLQARTGLVYDQRMMDH---YNLWDN-----------HHPEIPQRVSRIMCRLEELGLA 533
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y+ L +K + + + + P ++ A
Sbjct: 534 GRCLTLPARPATDAELLTCHSAEYVGRLRATEKMKTRELHRESANFESIYICPSTFACAQ 593
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ--LALNSGC 182
LA G T ++ VL G A+VRPPGHHA+ A G+CF N+ +A + A++
Sbjct: 594 LATGATCCLVEAVLAGEVLNGIAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHA 653
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL ISLH +HG++ P + GT +++G G G+
Sbjct: 654 LRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDE-GTSNQVGRSAGTGF 712
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+ NG GD Y+ A LV+P +F P ++++ G D++ DP G L+ +G
Sbjct: 713 TVNVAW-NGPRVGDSEYLAAWHRLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQLSPEG 771
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLS 352
Y + ++ LA GG ++++ EGGY++T + + A +L P LL+
Sbjct: 772 YAHLTHLLMGLA----GGHIILILEGGYNLTSISESMAACTRTLLGDPPPLLT 820
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 168/335 (50%), Gaps = 17/335 (5%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 99 GTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIREGLLDRCVSFQARF-AEKEELML 157
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ +YI+ E + G + D L+P S+ A LA G+ L + VL
Sbjct: 158 VHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEI 217
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEG 201
+ A++RPPGHHAQ ++ DGYC N+ +A + A + +V+++D DVH+G GT
Sbjct: 218 QNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQVKHRIQRVLIVDWDVHHGQGTQFT 277
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
F + VL S+H G + P H + +G G+G GY +N+P G D Y+ A
Sbjct: 278 FDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIAA 336
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G D+ DP G T G+ ++ ++ LA GGRL
Sbjct: 337 FLRVLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLA----GGRL 392
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
++ EGGY++ A + A+L +L P +L P
Sbjct: 393 ILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESP 427
>gi|333899853|ref|YP_004473726.1| histone deacetylase superfamily protein [Pseudomonas fulva 12-X]
gi|333115118|gb|AEF21632.1| histone deacetylase superfamily [Pseudomonas fulva 12-X]
Length = 342
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 118/218 (54%), Gaps = 9/218 (4%)
Query: 112 GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAG 171
G + G+W AA A L+ K + DG K A+AL RPPGHHA + GYC+LNNA
Sbjct: 117 GAPITAGTWQAAWSAAQVALTGQKLISDG-AKSAFALCRPPGHHAAADLMGGYCYLNNAA 175
Query: 172 LAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVD 231
+A Q L+ GC +V ++D+D H+GNGT FY + VL S+H + P G D
Sbjct: 176 IATQAFLDQGCKRVAILDVDYHHGNGTQSIFYERSDVLVTSIHGDPSFEFPFFL--GYHD 233
Query: 232 ELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNG 291
E+GEG G G+N N+PL +G+G + A+ E I ++ P++IV+ +G D+ DP
Sbjct: 234 EIGEGAGKGFNFNLPLASGSGWDRWSAAL-EQACARITEYAPDVIVVSLGVDTFKEDPIS 292
Query: 292 RQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+ L Y MG + L G L V EGGY V
Sbjct: 293 QFKLDNPDYLRMGERIARL-----GKPTLFVMEGGYAV 325
>gi|120556553|ref|YP_960904.1| histone deacetylase superfamily protein [Marinobacter aquaeolei
VT8]
gi|120326402|gb|ABM20717.1| histone deacetylase superfamily [Marinobacter aquaeolei VT8]
Length = 337
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 130/220 (59%), Gaps = 11/220 (5%)
Query: 109 VCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ DG+ + +W AA + T L A ++ G + AYA+ RPPGHHA+ A G+C+L
Sbjct: 110 LADGSCPIGENTWKAAYWSAQTALGAADALIAGE-RNAYAVCRPPGHHARKDAAGGFCYL 168
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NNA +A + L S + V++D D+H+G G E FY + VL IS+H + ++ P +
Sbjct: 169 NNAAIAAE-HLKSRFPRTVILDTDMHHGQGIQEIFYDRSDVLYISIHGDPTNFYPV--VS 225
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G DE GEGEG+GYN+N+P+P+G+ + + + E V AI+ ++P++++L +G D
Sbjct: 226 GFEDERGEGEGYGYNINLPMPHGSSEEDFFAKLDE-AVAAIRLYQPDVLILTLGFDIYKN 284
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP + +T +G+ + +R L G ++VQEGGY
Sbjct: 285 DPQAKVSVTSEGFCRLSTHLRQL-----GLPTMVVQEGGY 319
>gi|325096734|gb|EGC50044.1| histone deacetylase hda1 [Ajellomyces capsulatus H88]
Length = 781
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 158/322 (49%), Gaps = 30/322 (9%)
Query: 46 VLEKHPENSDRIKNIVSILKRG----------PISP----YISWHSGIPAQIPQLLSFHT 91
L+ HPE+ RI I L + P+ P I +I +
Sbjct: 150 TLDVHPEDPRRIYYIYKELCKAGLVDDPESSRPLVPQPLQRIDAREATEEEISLVHDAEH 209
Query: 92 PDYINE---LVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYAL 148
D++ ++E + + D N ++ +A+L+ G + V+D K A A+
Sbjct: 210 YDFVQSTKFMLEEELIALEHTRDSIYFNSLTFTSAVLSCGGAIETCMAVVDRQVKNAIAV 269
Query: 149 VRPPGHHAQPTMADGYCFLNNAGLA---VQLALNSGCGKVVVIDIDVHYGNGTAEGFYRS 205
+RPPGHHA+ G+C NN +A Q C K++++D DVH+GNG + FY
Sbjct: 270 IRPPGHHAERNKTMGFCLFNNVCVAAKVCQKEFGDKCRKILILDWDVHHGNGIQKAFYDD 329
Query: 206 NKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTEL 263
+L IS+H+ GS+ P + G D G G G G N+NIP P G GD Y++A E+
Sbjct: 330 PNILYISIHVYRDGSFYPGG-EGGNWDRCGAGSGLGKNINIPWPTQGMGDGDYMYAFQEV 388
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
V+P +F+P+++++ G D++A D G +T Y M R++ +LA GG++ +
Sbjct: 389 VMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCYAHMTRMLMNLA----GGKVAVCL 444
Query: 324 EGGYH---VTYSAYCLHATLEG 342
EGGY+ ++ SA + TL G
Sbjct: 445 EGGYNFRSISKSALAVTRTLMG 466
>gi|395500157|ref|ZP_10431736.1| acetylpolyamine aminohydrolase [Pseudomonas sp. PAMC 25886]
Length = 341
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++A K +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPIGELTWRSAYWSAQSAVAAAKDILDG-APAAYALCRPPGHHARFDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q AL G +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYINNAAVAAQ-ALRDGFERVAVLDTDMHHGQGIQEIFYDRDDVLYVSIHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G +E G G G+NLN+P+ +G + + + EL + A+++F +++VL +G D
Sbjct: 225 --VAGFAEERGTDAGEGFNLNLPMAHGASEAVFFDKL-ELALKAVKEFSADVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +R L G +IVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTREGFVRLGECIRGL-----GLPCVIVQEGGYHL 322
>gi|335440022|ref|ZP_08561746.1| histone deacetylase superfamily protein [Halorhabdus tiamatea
SARL4B]
gi|334889190|gb|EGM27480.1| histone deacetylase superfamily protein [Halorhabdus tiamatea
SARL4B]
Length = 336
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 147/308 (47%), Gaps = 34/308 (11%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPA-QIP 84
L HDTG +HPE+ DR++ I L Y+ PA +P
Sbjct: 10 LEHDTGS----------------RHPESPDRLRAIKRTLAETDHVEYV------PANDLP 47
Query: 85 Q--LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH- 141
+ + H +Y+ ++ + GG TV +W AA+ + A + LDG
Sbjct: 48 RDAVHGIHDDEYLRDVRQFCANGGGNWDADTVAVEATWDAAMASAALATWAAREALDGAD 107
Query: 142 -GKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTA 199
+AL RPPGHHA A G+CFLNNA +A + AL+ V ++D DVH+GNGT
Sbjct: 108 GADTPFALGRPPGHHAVEDDAMGFCFLNNAAVAAEHALDREDVENVAILDFDVHHGNGTQ 167
Query: 200 EGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHA 259
+ FY + V S H +P G V E G G G LN+P P+G+GD Y+
Sbjct: 168 DIFYDRSDVYYASFHEE-----GLYPGTGDVGETGVDAGRGRTLNVPFPSGSGDADYLAV 222
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
E++ P + ++P+++++ G D+ DP R ++ GY + +R+L DR G L
Sbjct: 223 YEEVIAPEFEAYDPDLLIVSAGFDAHENDPISRMLVSTGGYGVLAERLRTLTDRIDAG-L 281
Query: 320 LIVQEGGY 327
V EGGY
Sbjct: 282 AFVLEGGY 289
>gi|240280940|gb|EER44443.1| histone deacetylase hda1 [Ajellomyces capsulatus H143]
Length = 781
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 13/240 (5%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D N ++ +A+L+ G + V+D K A A++RPPGHHA+ G+C NN
Sbjct: 232 DSIYFNSLTFTSAVLSCGGAIETCMAVVDRQVKNAIAVIRPPGHHAERNKTMGFCLFNNV 291
Query: 171 GLA---VQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQ 226
+A Q C K++++D DVH+GNG + FY +L IS+H+ GS+ P +
Sbjct: 292 CVAAKVCQKEFGDKCRKILILDWDVHHGNGIQKAFYDDPNILYISIHVYRDGSFYPGG-E 350
Query: 227 NGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G D G G G G N+NIP P G GD Y++A E+V+P +F+P+++++ G D++
Sbjct: 351 GGNWDRCGAGSGLGKNINIPWPTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAA 410
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH---VTYSAYCLHATLEG 342
A D G +T Y M R++ +LA GG++ + EGGY+ ++ SA + TL G
Sbjct: 411 AGDELGGCFVTPPCYAHMTRMLMNLA----GGKVAVCLEGGYNFRSISKSALAVTRTLMG 466
>gi|78486126|ref|YP_392051.1| histone deacetylase superfamily protein [Thiomicrospira crunogena
XCL-2]
gi|78364412|gb|ABB42377.1| Histone deacetylase family protein [Thiomicrospira crunogena XCL-2]
Length = 379
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 162/325 (49%), Gaps = 12/325 (3%)
Query: 30 TGKGLFDTG--FDPGFLE-VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQL 86
T G F TG DP F + + HPEN+ R+ I + +++ I P ++ + A +L
Sbjct: 31 TRPGHFSTGVVLDPLFFKHDMSGHPENAQRLVAINNEMEKQGIWPQLTPVATRLATNEEL 90
Query: 87 LSFHTPDYINEL-VEADKAGG--KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
L HT YI+E+ + +D GG + T LN S+ AA +A G+ ++ + D
Sbjct: 91 LLAHTQSYIDEIEILSDSGGGFYEPYQGDTYLNASSFDAAKMAAGSNINLNLAIYDRKID 150
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGF 202
+AL+RPPGHHA A G+C N+ +A + L G ++ +ID DVH+GNGT +
Sbjct: 151 HGFALLRPPGHHALQNKAMGFCIFNSDIIAARALQKYRGVKRIAIIDFDVHHGNGTQDLS 210
Query: 203 YRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTE 262
+++IS+H H W P G G+ + G +N P P G GD+ Y++ +
Sbjct: 211 DNDPSIMSISIH-QHPFW----PMTGGHTFTGKDKAKGTVVNCPFPKGAGDQTYLNVYDQ 265
Query: 263 LVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIV 322
++ P ++ F+P I++ G D+ DP + +++ G+ ++ A GGR+
Sbjct: 266 VIHPKLEAFKPEHIIVFAGYDAHWQDPLAQHQVSVAGFNQLVDKCLKSAKELCGGRISFS 325
Query: 323 QEGGYHVTYSAYCLHATLEGVLNLP 347
GGY++ A C T +L P
Sbjct: 326 LGGGYNLNPLAQCAVGTFHTLLGNP 350
>gi|448320471|ref|ZP_21509958.1| histone deacetylase [Natronococcus amylolyticus DSM 10524]
gi|445605936|gb|ELY59851.1| histone deacetylase [Natronococcus amylolyticus DSM 10524]
Length = 339
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 28/337 (8%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
+HPE+ DR++ I LKR Y+ P + + H DY+ + E GG
Sbjct: 17 RHPESPDRLRAIRERLKRKHGVEYVE---ADPVGVDVMEGVHDRDYLESVREFCADGGGN 73
Query: 109 VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQPTMADGYCF 166
T +W A + G A + LDG K +++ RPPGHHA A G+CF
Sbjct: 74 WDPDTTAVEETWEAVKYSAGQACWAAEAALDGADGRKTPFSIGRPPGHHAVYDDAMGFCF 133
Query: 167 LNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
NN +A Q AL++ +V ++D DVH+GNGT + FY V S+H +P
Sbjct: 134 ANNVAVAAQHALDTRDVDRVAIVDWDVHHGNGTQDIFYDREDVFFASIHEE-----GLYP 188
Query: 226 QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSS 285
G V+E GEG+G G +N+P+P GT DR Y+ A+ V A++ ++P+++++ G D+
Sbjct: 189 GTGQVEETGEGDGEGATMNVPMPAGTDDRDYLEAVEGPVSSALEAYDPDLLLISAGFDAH 248
Query: 286 AFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY---SAYCLHATLEG 342
DP R L+ + Y + RS+ADR L V EGGY + S +H T +G
Sbjct: 249 RHDPISRIRLSTEAYALLTDRFRSVADRTDAA-LAFVLEGGYGLDVLADSVALVHETFDG 307
Query: 343 VLNLPLALLSDPIAYYPEDEAFP--VKVIESIKQYQN 377
+PI P+D+ P V+++E + +
Sbjct: 308 ---------REPIE--PDDDCSPDAVELLEEVADAHD 333
>gi|403416897|emb|CCM03597.1| predicted protein [Fibroporia radiculosa]
Length = 685
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 149/296 (50%), Gaps = 26/296 (8%)
Query: 50 HPENSDRIKNIVSILK---------RGPISPYISWHSGI---PAQIPQLLSFHTPDYINE 97
H E +RIK I ILK R PI P + + + A ++LS H
Sbjct: 74 HEEQPERIKRIFDILKEEKCLARMRRLPIRPVLREEALLVHSEALWDKVLSVHC------ 127
Query: 98 LVEADKAGGKMVCDGTVL--NPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
+ E D + L + + A ++ G + A V G K ++A+VRPPGHH
Sbjct: 128 MTEQDIVDSASYYEELSLYVHQSTPYCAQISAGGVIEAALAVARGEVKKSFAIVRPPGHH 187
Query: 156 AQPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A+P G+CF NN +A ++ L + +V+++D DVH+GNGT FY VL +SLH
Sbjct: 188 AEPDEHMGFCFFNNVSIATKVVQLRTALKRVMILDWDVHHGNGTQRAFYDDPSVLYVSLH 247
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAIQKFEP 273
G + + G++ G G G GY++NIP P G GD Y+ A ++V+P +F P
Sbjct: 248 RYEGGFYYPNGPFGSMVSCGTGAGLGYSVNIPWPEKGMGDADYILAFQKVVMPIALEFAP 307
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
++++ G D++ D G ++ GY M ++ SLA G+L++ EGGY++
Sbjct: 308 ELVIISAGFDAAEGDTLGECHVSPAGYAHMTHMLSSLA----SGKLVVALEGGYNL 359
>gi|452820675|gb|EME27714.1| histone deacetylase [Galdieria sulphuraria]
Length = 366
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 19/304 (6%)
Query: 49 KHPENSDRIKNIVSILKRGPIS------PYISWHSGIPAQIPQLLSFHTPDYINELVEAD 102
+HPE R+ + L+ PI P+ ++LS H+ Y+ +L
Sbjct: 72 RHPECPGRVTTTMRHLESSPIFSSLQLLPFEDEPCDDTWLKKRILSIHSVGYLEDLERWI 131
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
G K + T L S + LAV L A ++ + + + ++ L RPPGHHA P
Sbjct: 132 NQGAKSLDADTYLCDKSLEVSRLAVRAWLKATQYSFE-YSQPSFVLARPPGHHATPFTGM 190
Query: 163 GYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWG 221
G+C +N +A + A+ G +V ++D DVH+GNGTA F R +V +SLH
Sbjct: 191 GFCIFSNLAIAAKYAMEELGVSRVSILDWDVHHGNGTASCFQRDERVRFVSLHQ-----F 245
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P +P G E G G LNI G +V + E +P + + +P+++ + G
Sbjct: 246 PFYPMTGAPSERGP---LGNLLNIAFEAGADGSEFVKRLEEEAIPFLSQHKPDIVFVSAG 302
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE 341
D+ DP G CL D Y EM RIV S + R++ EGGYH+ +A + TL
Sbjct: 303 YDALKMDPLGGLCLVPDDYFEMTRIVMS---SFGHERIVFGLEGGYHLEETAKAIEKTLH 359
Query: 342 GVLN 345
G+L+
Sbjct: 360 GILH 363
>gi|351700570|gb|EHB03489.1| Histone deacetylase 10 [Heterocephalus glaber]
Length = 724
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 145/276 (52%), Gaps = 14/276 (5%)
Query: 90 HTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
H+P+Y+ + G + + D +P ++ A LAVG L + VL G
Sbjct: 64 HSPEYVALVRRTQTLGTEELQALSGQFDAVYFHPSTFHCARLAVGAVLQLVDAVLTGGSN 123
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGF 202
ALVRPPGHH+Q A+G+C NN +A + A G +V+++D D+H+G G F
Sbjct: 124 NGLALVRPPGHHSQRAAANGFCVFNNVAIAAEHAKRKHGLHRVLIVDWDIHHGQGIQYIF 183
Query: 203 YRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAM 260
VL S H HG + P P++ D +G+G+G G+ +N+P G G+ Y+ A
Sbjct: 184 EDDPSVLYFSWHRYEHGRFWPFLPES-DADTVGQGQGRGFTVNLPWNQVGMGNADYLAAF 242
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+++P +F+P ++++ G DS+ DP G+ T + + + ++++ LA GGR+
Sbjct: 243 LHVLLPLAFEFDPELVLISAGFDSATGDPEGQMQATPECFAHLTQLLQVLA----GGRVC 298
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
V EGGYH+ A + T+ +L P+ +L P+A
Sbjct: 299 AVLEGGYHLESLAQSVCMTVRSLLGDPVPVLLGPMA 334
>gi|187478691|ref|YP_786715.1| acetylpolyamine aminohydrolase [Bordetella avium 197N]
gi|115423277|emb|CAJ49810.1| acetylpolyamine aminohydrolase [Bordetella avium 197N]
Length = 354
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 127/229 (55%), Gaps = 10/229 (4%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+ P +W AAL + ++A V H AYAL RP GHHA A G+C+LN++ A
Sbjct: 131 IGPNTWRAALRSTHNAVAAADWVRQ-HQGAAYALCRPSGHHAHNDRAGGFCYLNSSAAAA 189
Query: 175 QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELG 234
Q L +V V+D+D H+G+GT FY+ + V+T+SLH + + P + G E G
Sbjct: 190 Q-RLTQTWKRVAVLDVDAHHGDGTQNIFYQRSDVMTLSLHADPTGYYPFY--TGYAHERG 246
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
G G GYNLN PLP+G+G+ ++ + ++ A++ + P +VL +G D+ DP
Sbjct: 247 YGSGHGYNLNFPLPHGSGNEVFLQNLDNALI-ALRDYRPQALVLALGFDTYKDDPISVLK 305
Query: 295 LTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
L +D YR +G ++SLA ++VQEGGY V L A L+G+
Sbjct: 306 LDLDAYRHIGERIQSLA-----LPTVVVQEGGYMVESIGPALDAFLQGM 349
>gi|78778007|ref|YP_394322.1| histone deacetylase superfamily protein [Sulfurimonas denitrificans
DSM 1251]
gi|78498547|gb|ABB45087.1| Histone deacetylase superfamily [Sulfurimonas denitrificans DSM
1251]
Length = 577
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
T LN ++ AA AV ++A V++G IAYALVRPPGHHA+ G+C+ N+A +
Sbjct: 352 TPLNANAYKAARGAVDCAVTAADAVING-THIAYALVRPPGHHAERRTLGGFCYFNSAAV 410
Query: 173 AVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ-NGTVD 231
A S GKV V+D+D H+GNGT + FY VLTIS+ HG ++P G D
Sbjct: 411 AAHHL--SSFGKVAVLDVDFHHGNGTQDIFYERRDVLTISI---HGDPKFAYPHFAGFKD 465
Query: 232 ELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNG 291
E GE EG G+N+N PL T Y + + I KF P+ +V+ +G D++ DP G
Sbjct: 466 ECGEKEGEGFNINYPLAQNTTPEQYRRTLIS-ALKQISKFTPSYLVICLGLDTAKSDPTG 524
Query: 292 RQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH 328
++EMGR++ +L + L+VQEGGY
Sbjct: 525 TWSNEAKDFKEMGRLIGALKI-----QTLVVQEGGYR 556
>gi|414163309|ref|ZP_11419556.1| hypothetical protein HMPREF9697_01457 [Afipia felis ATCC 53690]
gi|410881089|gb|EKS28929.1| hypothetical protein HMPREF9697_01457 [Afipia felis ATCC 53690]
Length = 310
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 45 EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKA 104
+V E HPE DRI+ + L + P + + + I + H Y++E+ E
Sbjct: 16 KVSEGHPERPDRIRAMEKALSQDIFKPLVREEAPM-GDIETVKLCHDESYVDEIREMSPK 74
Query: 105 GGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G + DG T+++PG+W AA+ VG + + V+ G + + RP GHHA+ A G
Sbjct: 75 QGIVYIDGDTMMSPGTWEAAMRGVGGANAGVDAVVSGKAQNVFVGTRPCGHHAERNRAMG 134
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C + A +A + A G G+V V+D DVH+GNG+ + F+ V+ S H P
Sbjct: 135 FCIFDQAAIAARYAQTKHGIGRVAVVDFDVHHGNGSQDIFWADPTVMYCSTHQM-----P 189
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
P G E GE + +N P+ G G + A +++P +QKF P +I++ G
Sbjct: 190 LFPGTGATQERGEHDTI---VNAPMHPGDGGTIFRQAFEGVILPQLQKFSPELIIISAGF 246
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP L + + + + +AD+ +GGR++ V EGGY
Sbjct: 247 DAHWRDPLANIQLDEKDFGWVTKKLMDVADKSAGGRIVSVLEGGY 291
>gi|403222692|dbj|BAM40823.1| uncharacterized protein TOT_030000085 [Theileria orientalis strain
Shintoku]
Length = 840
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
Query: 140 GHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGT 198
G + +A+VRPPGHHA P G+C NN +A + L G +V ++D DVH+GNGT
Sbjct: 196 GSTQKGFAIVRPPGHHATPDKMMGFCIFNNVAIAARHLQRKHGLRRVAIVDWDVHHGNGT 255
Query: 199 AEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVH 258
+ FY + V ISLH +P G DE+G G+G YN+NIPL G + VH
Sbjct: 256 QDIFYDDDSVCFISLHRYGTEEESFYPYTGYCDEIGVGKGCKYNVNIPLEKGFTNSDLVH 315
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
+VVP +Q+F+P I++ G D++ D G L +GY + LA+++ GR
Sbjct: 316 CFNRVVVPVLQRFKPEFIIVSAGFDAAKDDLLGGCNLDKEGYSWATAQLCELAEKHCKGR 375
Query: 319 LLIVQEGGY 327
LL+ EGGY
Sbjct: 376 LLLSLEGGY 384
>gi|302818470|ref|XP_002990908.1| hypothetical protein SELMODRAFT_161290 [Selaginella moellendorffii]
gi|300141239|gb|EFJ07952.1| hypothetical protein SELMODRAFT_161290 [Selaginella moellendorffii]
Length = 285
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 138/284 (48%), Gaps = 21/284 (7%)
Query: 106 GKMVCDGTVLNPGS---------WGAALLAVGTTLSAMKHVLDGHGK---IAYALVRPPG 153
GK DG + GS + ++LA G +L+ + ++ G I +AL+RPPG
Sbjct: 2 GKAAADGLIFIEGSGPTYATSTTYEESMLAAGGSLALVDSLMSVAGPRPPIGFALIRPPG 61
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTIS 212
HHA P G+C N +A + A + G +V +ID DVH+GNGT + FY V S
Sbjct: 62 HHAVPAGPMGFCVFGNVAIAARHAQRAHGLKRVFIIDFDVHHGNGTQDAFYDDPDVFFCS 121
Query: 213 LHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFE 272
H + S+P G + ++G +G G LN+PLP G+G + A+ E++VP+ KF+
Sbjct: 122 THQDG-----SYPGTGKMRQVGTRDGEGTTLNLPLPGGSGHAAMLTALKEVIVPSCLKFK 176
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P+++++ G D+ DP T Y + ++ LA GR + EGGY++
Sbjct: 177 PDILLVSAGYDAHVLDPLASLQFTTATYYHLASTIKQLAREVCNGRCVFFLEGGYNLDAL 236
Query: 333 AYCLHATLEGVLN---LPLALLSDPIAYYPEDEAFPVKVIESIK 373
+ + T G+L+ L DP Y E + I IK
Sbjct: 237 SLSVADTFRGLLDDEESRAKLTDDPAVLYEEPLVGVRRAITEIK 280
>gi|223478472|ref|YP_002582855.1| histone deacetylase [Thermococcus sp. AM4]
gi|214033698|gb|EEB74524.1| histone deacetylase [Thermococcus sp. AM4]
Length = 334
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 152/309 (49%), Gaps = 38/309 (12%)
Query: 35 FDTGFDPGFLEVLEK--HPENSDRIKNIVSILKR----GPISPYISWHSGIPAQIPQLLS 88
F + P FLE + HPEN +R+ V +L+R PI P +P +LL
Sbjct: 4 FSVIYSPVFLEHRPENYHPENPNRLLRAVKVLQRLNLWKPIEP-------VPVPEEELLK 56
Query: 89 FHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYAL 148
H+ DYI + E+ + + D T ++PG+W AAL A G + A++ L+ G + AL
Sbjct: 57 VHSRDYIELVRESSRTFSYLDPD-TYVSPGTWEAALTAFGASKLAVELALEKKG-LHLAL 114
Query: 149 VRPPGHHA--------QPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAE 200
VRPPGHHA PT+ G+C NNA A ++A GKV+VID D H+GNGT E
Sbjct: 115 VRPPGHHAGKAGRAFNAPTL--GFCIFNNAAYAAKVA-EELAGKVLVIDFDAHHGNGTQE 171
Query: 201 GFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAM 260
+ + I LH +P +G ++G G +N+P+P+ +GD +++A
Sbjct: 172 ILWNDPNAVHIDLHERD-----IYPWSGYEHDVGGKNAEGTKINLPMPHYSGDDDFIYAW 226
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
E+V+P + +F P ++V+ G D G T+ S RY L
Sbjct: 227 NEIVLPVLAQFRPKLVVVSAGFDGFL----GENLTTLRLSELFFAYAGSTLSRYP---LA 279
Query: 321 IVQEGGYHV 329
++ EGGY V
Sbjct: 280 VIFEGGYSV 288
>gi|149376492|ref|ZP_01894253.1| histone deacetylase superfamily protein [Marinobacter algicola
DG893]
gi|149359159|gb|EDM47622.1| histone deacetylase superfamily protein [Marinobacter algicola
DG893]
Length = 337
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 131/224 (58%), Gaps = 11/224 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ DG+ + +W AA + T L A ++ G + AYA+ RPPGHHA+ A G
Sbjct: 106 AARYQADGSCPIGANTWDAAYWSAQTALGAADALVAGE-RHAYAVCRPPGHHARKDAAGG 164
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNNA +A + L ++ ++D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 165 FCYLNNAAIAAE-HLKPRYPRIAILDTDMHHGQGIQEIFYDRSDVLYVSIHGDPTNFYPV 223
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+G DE GEGEGFGYN+N+P+P+G+ ++ + + E + AI+ F+P++++L +G D
Sbjct: 224 --VSGYEDERGEGEGFGYNINLPMPHGSSEQDFFDKLDE-ALAAIRLFQPDVLILTLGFD 280
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP + ++ +G+ +G +R +G L+VQEGGY
Sbjct: 281 IYYNDPQAKVSVSSEGFCRLGSDIRR-----TGLPTLVVQEGGY 319
>gi|85717534|ref|ZP_01048479.1| histone deacetylase superfamily protein [Nitrobacter sp. Nb-311A]
gi|85695651|gb|EAQ33564.1| histone deacetylase superfamily protein [Nitrobacter sp. Nb-311A]
Length = 309
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DRI+ I +L P ++ + + H YI EL G +
Sbjct: 20 HPERPDRIRVIDEVLTADPFRG-LTRGEAPEGSLDSVALCHNEHYIAELRHLSPTNGLVY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T ++PG+W AA+ VG ++A + V+ G A+ RPPGHHA+ A G+C +
Sbjct: 79 LDSDTSMSPGTWEAAMRGVGGAIAATEAVIAGDASNAFVATRPPGHHAETGRAMGFCLFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
A +A + A G +V V+D DVH+GNGT + F+ V+ S H P P +
Sbjct: 139 QAAIAARHAQRKHGIDRVAVVDFDVHHGNGTQDIFWADRSVMYCSTHQM-----PLFPGS 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL +G G + A L++P ++KF P ++V+ G D+ +
Sbjct: 194 GASSERGDHDTI---VNAPLASGDGGAKFRSAFENLILPRLEKFAPELLVISAGFDAHSR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + R + +A +GGR++ V EGGY
Sbjct: 251 DPLATLNLAASDFGWVTRKLMDIAHATAGGRIVSVLEGGY 290
>gi|383786652|ref|YP_005471221.1| deacetylase [Fervidobacterium pennivorans DSM 9078]
gi|383109499|gb|AFG35102.1| deacetylase, histone deacetylase/acetoin utilization protein
[Fervidobacterium pennivorans DSM 9078]
Length = 327
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 30/310 (9%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ--LLSFHTPDYINELVEADKAG- 105
++PE +R++ ++ L+ P I P Q + +L H+ Y N LV+ +
Sbjct: 32 RNPEKPNRLRFVLQYLQER--FPAIQ-----PLQFSEEHILKVHSEKYFNYLVKKSQEVE 84
Query: 106 ----------GKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
++ GT + + AA AV LSA K+ + I YAL RPPGHH
Sbjct: 85 DEYLPEVFFVDQIFDTGTPIKKEIFFAAKRAVDIVLSATKYAFE-QKVITYALTRPPGHH 143
Query: 156 AQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A GYC+ NNA +A + G +V V+D+D H+GNGT + FY+ VL +S+H
Sbjct: 144 AMVNYGGGYCYFNNAAVAARYLEEKGM-RVAVLDLDFHHGNGTQDIFYKDPNVLYVSIHG 202
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
+ + P +G E GEG +G NLNIPLP + Y A+ + + ++ F+P+
Sbjct: 203 DPRKFYPWF--SGYETECGEGNAYGTNLNIPLPENSDINAYGEALKK-AIQKLKDFKPDA 259
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV-RSLADRYSGGRLLIVQEGGYHVTYSAY 334
+++ G D+ DP GR L Y+ +G ++ SL Y L+IV EGGY+ +
Sbjct: 260 LMISFGTDTHIKDPVGRFALLSKDYKTIGSLIANSLVSDY----LVIVHEGGYNSRSNLV 315
Query: 335 CLHATLEGVL 344
+ L G+L
Sbjct: 316 AVKNFLAGLL 325
>gi|433775630|ref|YP_007306097.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
gi|433667645|gb|AGB46721.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
Length = 342
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 10/225 (4%)
Query: 103 KAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMAD 162
+AG M ++ +W +AL + + + A + V+ G AYAL RPPGHHA A
Sbjct: 107 QAGYHMADTACPISGETWQSALWSAWSAVEAAETVMAG-ASAAYALCRPPGHHAFADAAG 165
Query: 163 GYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
G+CF+NN+ +A Q+ L +V ++D+D+H+GNGT FY VLT+SLH + + P
Sbjct: 166 GFCFINNSAVAAQV-LRRQAARVAILDVDLHHGNGTQGIFYARPDVLTVSLHADPVRFYP 224
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
G DE GEG G GYN N+PLP + D ++ A+ + I+ F P+++V+ +G
Sbjct: 225 FF--WGHADERGEGPGLGYNFNLPLPRKSADAAFLEALG-VAFQRIRAFSPDVLVVALGL 281
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
D+ DP G +T G+ +G + L G +IVQEGGY
Sbjct: 282 DAFEGDPFGGLSVTTPGFSRIGEAIAGL-----GLPAVIVQEGGY 321
>gi|348540413|ref|XP_003457682.1| PREDICTED: histone deacetylase 6-like [Oreochromis niloticus]
Length = 1131
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 172/337 (51%), Gaps = 40/337 (11%)
Query: 10 SPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPI 69
+P+ + +D+ M+ H L+D HPE RI I S ++ +
Sbjct: 486 APSVATTTGLVYDERMMEH---SNLWD-----------RHHPEQPQRIFKIFSKHQQLGL 531
Query: 70 SPYISWHSGIPAQIP---QLLSFHTPDYINELV--------EADKAGGKMVCDGTVLNPG 118
+ IP ++ +L H+ +I ++ E K G + V LN
Sbjct: 532 ---VDRCQRIPVRLATEEELSLCHSMQHIEQMKATAVMKPRELHKLGDEFV--SIYLNQQ 586
Query: 119 SWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLAL 178
S+ A LA G+ L+A+ +L G A A+VRPPGHHA+ G+C N A LA + A
Sbjct: 587 SFQCARLAAGSCLNALDQILCGQVTNAVAIVRPPGHHAERDYPCGFCLFNTAALAARYAK 646
Query: 179 NSG---CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELG 234
+ +++++D DVH+GNGT F + VL ISLH ++G++ PS ++ D++G
Sbjct: 647 KASHDPLMRILILDWDVHHGNGTQHMFEDDDSVLYISLHRYDNGAFFPSS-EDAAPDKVG 705
Query: 235 EGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQ 293
+G G+N+N+ G GD Y+ A +V+P +F P+++++ G D++ DP G
Sbjct: 706 VAKGAGFNVNVAWSGGRMGDSDYLAAFHRVVMPIATEFNPSLVLVSAGFDAARGDPLGGY 765
Query: 294 CLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
+T +GY + ++ SLA GGR+L++ EGGY+++
Sbjct: 766 NVTPEGYAHLTHMLMSLA----GGRVLVILEGGYNLS 798
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 163/343 (47%), Gaps = 25/343 (7%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--------ELVEA 101
H E+ DR+ ++ L+R + P A +LL H Y++ L E
Sbjct: 124 HLESPDRVTAVMKELERQDLLPLCIRVEPREATEEELLLAHMKHYVDLIKSTQTMTLAEL 183
Query: 102 DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMA 161
K D L+P S+ ++ AVG L + V+ K +A++RPPGHHAQ
Sbjct: 184 QTLSNKY--DSIYLHPDSFKVSVTAVGAVLQLVDRVMTSELKNGFAIIRPPGHHAQANEC 241
Query: 162 DGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGS 219
+GY NN +A + A +V+++D DVH+G G F VL S+H GS
Sbjct: 242 NGYSIFNNVAIAARYAQTRHAISRVLIVDWDVHHGQGIQYRFQEDPSVLYFSVHRYEQGS 301
Query: 220 WGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+ P P++ + +G G G N+N+P G D Y+ A ++++P +F+P ++++
Sbjct: 302 FWPHLPESDS-HFVGSGPAEGRNINLPWNQTGMTDADYIAAFQQVLLPVAYEFQPQLVLV 360
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ D G C++ ++ + ++ SLA+ GRL++ EGGY+ SA A
Sbjct: 361 SAGFDAAVGDLKGDMCVSPQCFQVLTHMLMSLAE----GRLVLALEGGYNYESSAESAAA 416
Query: 339 TLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIP 381
+ +L L+ P A P D A ++SI Q + + P
Sbjct: 417 CIRALLGGACPPLTPPTA--PSDSA-----LQSISQTISALYP 452
>gi|297182648|gb|ADI18806.1| deacetylases, including yeast histone deacetylase and acetoin
utilization protein [uncultured SAR11 cluster bacterium
HF4000_37C10]
Length = 307
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 149/311 (47%), Gaps = 28/311 (9%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ D LNH TG+G HPE DR+ ++ LK+ S + W
Sbjct: 5 ILTTDTYLNHHTGEG----------------HPERPDRVTAVIDHLKKVK-SKNLIWKKP 47
Query: 79 IPAQIPQLLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHV 137
+ L H +Y++ + ++ G DG T+++PGS A AVG+ L+A+ V
Sbjct: 48 EKFDLKYLALAHDKNYLDNIKDSFPKQGLNFLDGDTIVSPGSKEATRDAVGSILTAIDGV 107
Query: 138 LDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL-AVQLALNSGCGKVVVIDIDVHYGN 196
+ A+ VRPPGHHA+ A G+C NN + A L KV +ID DVH+GN
Sbjct: 108 MKKDFNNAFCAVRPPGHHAEKQKAMGFCVYNNIAVGAYYLLEKYKLKKVAIIDFDVHHGN 167
Query: 197 GTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGY 256
GT FY + KVL IS H P +P +G +E G + LN+PL GT +
Sbjct: 168 GTQNIFYDNEKVLYISSHQY-----PYYPGSGAANEKGNKDNV---LNVPLSAGTQSHEF 219
Query: 257 VHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSG 316
++A + + ++ F+P I+L G D+ DP + L Y + + + +LA
Sbjct: 220 LNAY-DSIFKKLKAFKPEFILLSAGFDAHKDDPLAQINLESKDYYTLTKRILTLAKELCD 278
Query: 317 GRLLIVQEGGY 327
G+++ + EGGY
Sbjct: 279 GKVVSILEGGY 289
>gi|195060356|ref|XP_001995788.1| GH17575 [Drosophila grimshawi]
gi|193896574|gb|EDV95440.1| GH17575 [Drosophila grimshawi]
Length = 1098
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 169/352 (48%), Gaps = 29/352 (8%)
Query: 14 EGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYI 73
G + +DD M H + L+D E H E +R + + +
Sbjct: 77 RGATALIYDDSMSEH---RCLWD-----------ETHQERPERFTRTMERCRELKLVDRC 122
Query: 74 SWHSGIPAQIPQLLSFHTPDYINEL-----VEADKAGGKMVC--DGTVLNPGSWGAALLA 126
A ++L H+ ++ L V+ D+A ++ D ++P ++ +LLA
Sbjct: 123 LQLKSRLATKEEILKLHSMEHYERLEQTSGVQNDEALEELSSHYDAIFIHPSTFKLSLLA 182
Query: 127 VGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKV 185
G+T+ + +L G + A++RPPGHHA + +GYC+ NN LA Q A+++ ++
Sbjct: 183 SGSTIELVDQLLLGKAQNGMAIIRPPGHHAMKSEFNGYCYFNNVALAAQHAIDAYQLQRI 242
Query: 186 VVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
++ID DVH+G GT FY +VL S+H HGS+ P+ P++ +G G G GYN N
Sbjct: 243 LIIDYDVHHGQGTQRFFYNDPRVLYFSIHRYEHGSFWPNLPESD-FHAIGSGAGTGYNFN 301
Query: 245 IPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREM 303
+PL G G+ Y+ +L+VP +F+P +I++ G D++ P G +T Y +
Sbjct: 302 VPLNAKGMGNGDYLAIFQQLLVPVALEFQPELILVSAGYDAALGCPEGEMEVTPACYPHL 361
Query: 304 GRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
+ + R+ ++ EGGY V + TL +L P L +P+
Sbjct: 362 L----NPLLPLANARIAVILEGGYCVDSLSEGAALTLRALLGDPCPALVEPL 409
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 156/316 (49%), Gaps = 30/316 (9%)
Query: 50 HPENSDRIKNIVS-------ILKRGPISPYISW-------HSGIPAQIPQLLSFHTPDYI 95
HPE RI+ I + + P+ P + H+ + L+ PD +
Sbjct: 540 HPEQPQRIRQIHQMHTDYQLVERMKPLQPRTATTDEVCLAHTRAHVNTVRRLAGRKPDEL 599
Query: 96 NELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
+L AD + L+P ++ A LA G L A+ V+ G + VRPPGHH
Sbjct: 600 QQL-GADY-------NSVYLHPSTFDCATLAAGAVLQAVDSVMRGETRSGICNVRPPGHH 651
Query: 156 AQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A+ G+C NN +A Q A+ +++++D DVH+GNGT F + KVL IS+H
Sbjct: 652 AESDHPHGFCIFNNVAIAAQYAIREYQLERILIVDWDVHHGNGTQHIFESNPKVLYISVH 711
Query: 215 M-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFE 272
+G++ P P +G D G+ G G+N+NIP G GD Y A +L++P +F
Sbjct: 712 RYENGAFFPKGP-DGNYDVCGKNAGCGFNVNIPWNKKGMGDVEYALAFQQLILPIAYEFN 770
Query: 273 PNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYS 332
P ++++ G D++ DP G +T +GY + +LA GGR+++ EGGY+V
Sbjct: 771 PQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLSALA----GGRIIVCLEGGYNVNSI 826
Query: 333 AYCLHATLEGVLNLPL 348
+Y + + +L P+
Sbjct: 827 SYAMTMCTKTLLGDPV 842
>gi|398935167|ref|ZP_10666296.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM41(2012)]
gi|398169889|gb|EJM57855.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM41(2012)]
Length = 341
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGEQTWRSAYWSAQSAIAGAQALLDGE-PAAYALCRPPGHHARAEAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q+ L +G +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYVNNAAVAAQV-LRAGFARVAVLDTDMHHGQGIQEIFYDRDDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G G G G+NLN+P+ +G + ++ ++ + A++ F ++VL +G D
Sbjct: 225 --VAGFADERGVGRGEGFNLNLPMAHGASEADFL-GQLDVALAAVKDFGAEVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +RSL G LIVQEGGYH+
Sbjct: 282 IFELDPQSKVAVTREGFARLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|254785003|ref|YP_003072431.1| hypothetical protein TERTU_0820 [Teredinibacter turnerae T7901]
gi|237685948|gb|ACR13212.1| conserved domain protein [Teredinibacter turnerae T7901]
Length = 311
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 15/297 (5%)
Query: 45 EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKA 104
+V ++HPE +R+ I L I ++ H PA+ L H+ +I + +
Sbjct: 15 DVGDEHPEAPERLSAINDALISLRIMDFLQCHDARPAERSALALAHSEAHIKRVYDKSPL 74
Query: 105 GGKMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G D T +NP S AALL VG + A+ V+ G K A+ VRPPGHHA+ A G
Sbjct: 75 MGLRQLDPDTFMNPHSLEAALLGVGAVMQAVDLVMAGKVKNAFCSVRPPGHHAERDKAMG 134
Query: 164 YCFLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C NN + AL + G KV ++D DVH+GNGT F ++VL S + P
Sbjct: 135 FCIFNNIAIGALHALEHHGLKKVAIVDFDVHHGNGTENIFLHDSRVLFCSTFQS-----P 189
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P D + E G+ +N+PL GT + + E ++P + FEP I + G
Sbjct: 190 LYP-----DTFADSEP-GHIVNVPLEPGTKGDLFRQQVRERILPELDAFEPEFIFISAGF 243
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT--YSAYCLH 337
D+ DP L D YR + + +A++++G R++ EGGY++ ++ C H
Sbjct: 244 DAHKQDPLAHLSLLEDDYRWITHQLLDVAEKHAGRRVVSALEGGYNLEALATSVCAH 300
>gi|254477077|ref|ZP_05090463.1| histone deacetylase family protein [Ruegeria sp. R11]
gi|214031320|gb|EEB72155.1| histone deacetylase family protein [Ruegeria sp. R11]
Length = 308
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 14/280 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE R+++++ L+ + + A +L H Y+ +L A G++
Sbjct: 20 HPERVARLEHVLHALEGLALKRV----TAPMAAEDDILRIHPASYLADLRNAVPQDGRVQ 75
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T ++PGS AA A G + A+ VL G + A+A VRPPGHHA+ A G+C
Sbjct: 76 LDADTYMSPGSLDAAFRAAGAVVRAVDMVLSGEVQNAFAAVRPPGHHAETDTAMGFCLFG 135
Query: 169 NAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA LA + AL+ G +V V+D DVH+GNGT + + + L IS P P +
Sbjct: 136 NAALAAKHALDHHGLARVAVVDFDVHHGNGTQDLLWDEPRALFISSQQM-----PLWPGS 190
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G +E G G LN+PLP G+G A + P ++ F+P +I++ G D+
Sbjct: 191 GRPEEDG---AHGQILNLPLPPGSGGVQMKAAYVDQAFPRLRAFKPELIIISAGFDAHQD 247
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP + + +R + R + SLA GGR++ EGGY
Sbjct: 248 DPLAELAWSTEDFRWLSRELCSLAQELCGGRIVSTLEGGY 287
>gi|387892711|ref|YP_006323008.1| acetylpolyamine aminohydrolase [Pseudomonas fluorescens A506]
gi|387160919|gb|AFJ56118.1| acetylpolyamine aminohydrolase [Pseudomonas fluorescens A506]
Length = 350
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 129/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++A +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPIGELTWRSAYWSAQSAIAAAGDILDG-APAAYALCRPPGHHARFDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q AL G +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYINNAAVAAQ-ALRQGFQRVAVLDTDMHHGQGIQEIFYDRDDVLYVSIHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G +E G G G GYN N+P+P+G + + + E + A++ F +++VL +G D
Sbjct: 225 --VAGFAEEKGSGAGEGYNRNLPMPHGASEAVFFEKL-EQALAAVKDFSADVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +R+L G +IVQEGGYH+
Sbjct: 282 IYELDPQSKVAVTREGFARLGARIRAL-----GLPCVIVQEGGYHL 322
>gi|359793587|ref|ZP_09296332.1| histone deacetylase superfamily protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359250192|gb|EHK53718.1| histone deacetylase superfamily protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 308
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 139/296 (46%), Gaps = 24/296 (8%)
Query: 41 PGFLEVLEK--HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ-----LLSFHTPD 93
P FLE L HPE DR++ I L+ + A+ P+ +L H
Sbjct: 9 PIFLEHLTPPGHPERPDRLRAIARALEDEAFAALDR------AEAPEGDEATILYAHPES 62
Query: 94 YINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPP 152
Y+ + A G DG T ++P SW A L A+G +A+ V G + RPP
Sbjct: 63 YVERIRRAIPEQGIASLDGDTSVSPKSWQAVLTAIGAANAAVDDVFAGAADNVFVASRPP 122
Query: 153 GHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTI 211
GHHA+ T A G+C N+A +A + A G G+V ++D DVH+GNGT + F+ VL
Sbjct: 123 GHHAEKTTAMGFCVFNHAAIAARHAQKKHGAGRVAIVDWDVHHGNGTQDIFWNDPSVLYC 182
Query: 212 SLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKF 271
S H P +P GT E G G +N PL +G + A V+PA+ F
Sbjct: 183 STHQM-----PLYPGTGTESETGAGN----IVNAPLAPQSGSEAFREAFRSRVLPAVDAF 233
Query: 272 EPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
P++I++ G D+ DP LT + + + A R+ G RL+ V EGGY
Sbjct: 234 APDLIIISAGFDAHHRDPLAEINLTEEDFDWATGKLMDRAARHCGNRLVSVLEGGY 289
>gi|406695694|gb|EKC98996.1| histone deacetylase clr3 [Trichosporon asahii var. asahii CBS 8904]
Length = 709
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 151/287 (52%), Gaps = 26/287 (9%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
E HPE RIK I + LK + + + Q+ H D+ ++ G +
Sbjct: 105 EGHPEEPMRIKRIFTRLKDNGLIRRMKALPSRECTLEQVRLVHGDDHWLKV-----QGTE 159
Query: 108 MVCDGTVLNPGSWGAAL-LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
D + + L LAV T G + A+A+VRPPGHHA+P G+CF
Sbjct: 160 TFTDEYIQETKQYYENLSLAVCT----------GQVRNAFAIVRPPGHHAEPDEHMGFCF 209
Query: 167 LNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
NN +A + G K V+++D DVH+GNGT F+ VL ISLH + G G +P
Sbjct: 210 FNNVAVAAREMQKEGLAKKVLILDWDVHHGNGTQRAFWNDPNVLYISLHRHDG--GKFYP 267
Query: 226 QN--GTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+ G +D +GEG G G ++NIP P+ G GD Y++A ++V+P +FEP+++++ G
Sbjct: 268 SSDFGALDMVGEGPGEGKSVNIPWPSGGFGDGDYIYAFQKIVMPIAYEFEPDLVIISSGF 327
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
D++ D G+ +T GY M ++ +LA GGRL++ EGGY++
Sbjct: 328 DAADGDHLGQCHVTPAGYGHMTHMLSALA----GGRLVVALEGGYNL 370
>gi|392951504|ref|ZP_10317059.1| Histone deacetylase [Hydrocarboniphaga effusa AP103]
gi|391860466|gb|EIT70994.1| Histone deacetylase [Hydrocarboniphaga effusa AP103]
Length = 307
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 45 EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKA 104
E+ E HPE R+ I L+ + ++ A LL HT +++ ++
Sbjct: 16 EMGEGHPEAPARLWAIEDRLRAIGLDLFLDRDDAPEASTEALLRVHTAEHVESVLRTKPT 75
Query: 105 GGKMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G + D T++NP + AAL A G + A+ V+ + VRPPGHHA+ A G
Sbjct: 76 QGYVRIDPDTMMNPHTAVAALHAAGAGVRAVDLVMSKRASFVFCAVRPPGHHAERARAMG 135
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL--HMNHGSWG 221
+CF NN +A AL G +V ++D DVHYGNGTA+ F +VL S H + W
Sbjct: 136 FCFFNNIAVAAGEALARGLSRVAILDFDVHYGNGTADIFRNDERVLLCSTYEHPLYPYWA 195
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
+P++ + ++ PL G G Y HA+T +P+++ F+P MI++ G
Sbjct: 196 -GNPEDTEI------------VDAPLAAGDGSAEYRHAITHRWIPSLEAFKPQMILVSAG 242
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
D+ DP LT D Y + + ++A R+ GR++ + EGGY A C+ A
Sbjct: 243 FDAHVRDPLASLELTDDDYYWTAQQILAVASRHCPGRVIAMLEGGYDTHALARCVEA 299
>gi|401885828|gb|EJT49913.1| histone deacetylase clr3 [Trichosporon asahii var. asahii CBS 2479]
Length = 709
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 151/287 (52%), Gaps = 26/287 (9%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
E HPE RIK I + LK + + + Q+ H D+ ++ G +
Sbjct: 105 EGHPEEPMRIKRIFTRLKDNGLIRRMKALPSRECTLEQVRLVHGDDHWLKV-----QGTE 159
Query: 108 MVCDGTVLNPGSWGAAL-LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCF 166
D + + L LAV T G + A+A+VRPPGHHA+P G+CF
Sbjct: 160 TFTDEYIQETKQYYENLSLAVCT----------GQVRNAFAIVRPPGHHAEPDEHMGFCF 209
Query: 167 LNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHP 225
NN +A + G K V+++D DVH+GNGT F+ VL ISLH + G G +P
Sbjct: 210 FNNVAVAAREMQKEGLAKKVLILDWDVHHGNGTQRAFWNDPNVLYISLHRHDG--GKFYP 267
Query: 226 QN--GTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+ G +D +GEG G G ++NIP P+ G GD Y++A ++V+P +FEP+++++ G
Sbjct: 268 SSDFGALDMVGEGPGEGKSVNIPWPSGGFGDGDYIYAFQKIVMPIAYEFEPDLVIISSGF 327
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
D++ D G+ +T GY M ++ +LA GGRL++ EGGY++
Sbjct: 328 DAADGDHLGQCHVTPAGYGHMTHMLSALA----GGRLVVALEGGYNL 370
>gi|348553640|ref|XP_003462634.1| PREDICTED: histone deacetylase 6-like [Cavia porcellus]
Length = 1159
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 176/356 (49%), Gaps = 17/356 (4%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 85 GTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLMQEGLLDRCVSFQARF-AEKEELML 143
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ ++I+ E + G V D L+P S+ A LA G+ L + VL
Sbjct: 144 VHSLEFIDLMETTQYMNEGELRVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGAEI 203
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A+VRPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 204 RNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFT 263
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHA 259
F + VL S+H G + P H + G G+G GY +N+P G D Y+ A
Sbjct: 264 FDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTTGFGQGQGYTINVPWNEVGMRDADYIAA 322
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G D+ DP G T G+ ++ ++ LA GG+L
Sbjct: 323 FLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGKL 378
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
++ EGGY++ A + A+L +L P +L P A P +A +E+++ +
Sbjct: 379 ILSLEGGYNLHSLAEGVSASLHILLGDPCPMLESPGAPCPSAQASISCTLEALEPF 434
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 169/343 (49%), Gaps = 35/343 (10%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P A+ + +D M+NH ++D+ HPE RI I+ L+ ++
Sbjct: 474 PLAQARTGLVYDQRMMNH---CNVWDS-----------HHPETPQRILRIMRHLEELGLA 519
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y+ L +K + + D + P ++ A
Sbjct: 520 GRCVTLPVRPATEAELLTCHSAEYVERLRATEKMKTRELHREGANFDSIYICPSTFTCAQ 579
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQ--LALNSGC 182
LA G ++ VL G A+VRPPGHHA+ A G+CF N+ +A + A++
Sbjct: 580 LATGAVCCLVEAVLSGEVLNGVAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRT 639
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D D+H+GNGT F VL +SLH + G++ P + G ++G G G+
Sbjct: 640 MRILIVDWDIHHGNGTQHIFEDDPSVLYVSLHRFDRGTFFPMGDE-GASSQVGRAAGTGF 698
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+ NG GD Y+ A LV+P +F P ++++ G D++ DP G ++ +G
Sbjct: 699 TVNVAW-NGPRVGDAEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEG 757
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVT----YSAYCLHA 338
Y + ++ LA+ GR+++V EGGY++T A C HA
Sbjct: 758 YAHLTHLLMGLAN----GRIILVLEGGYNLTSISESMAACTHA 796
>gi|109510484|ref|XP_228753.4| PREDICTED: histone deacetylase 6 [Rattus norvegicus]
gi|109511550|ref|XP_001057931.1| PREDICTED: histone deacetylase 6 isoform 1 [Rattus norvegicus]
gi|392343069|ref|XP_003754788.1| PREDICTED: histone deacetylase 6 isoform 2 [Rattus norvegicus]
gi|392355490|ref|XP_003752058.1| PREDICTED: histone deacetylase 6-like [Rattus norvegicus]
Length = 1152
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 156/306 (50%), Gaps = 21/306 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L+ ++ PA +LL+ H+ +Y+ L +K + +
Sbjct: 499 HPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHSAEYVERLRATEKMKTRDL 558
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + P ++ A LA G ++ VL G A+VRPPGHHA+P A G
Sbjct: 559 HREGANFESIYICPSTFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPGHHAEPDAACG 618
Query: 164 YCFLNNAGLAVQLA--LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A + +++++D DVH+GNGT F VL +SLH + G++
Sbjct: 619 FCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTF 678
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G G G+ +N+P NG GD Y+ LV+P +F P ++++
Sbjct: 679 FPMGDE-GASSQVGRAAGTGFTVNVPW-NGPRMGDADYLATWHRLVLPIAYEFNPELVLI 736
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT----YSAY 334
G D++ DP G +T +GY + ++ LA GGR++++ EGGY++T A
Sbjct: 737 SAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLA----GGRIILILEGGYNLTSISESMAA 792
Query: 335 CLHATL 340
C H+ L
Sbjct: 793 CTHSLL 798
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 171/346 (49%), Gaps = 21/346 (6%)
Query: 26 LNHDT----GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGI 79
LN +T G GL FD + + PEN +R+ I ++ G + +S+ +
Sbjct: 75 LNSETRVPVGTGLVFDEQLNDFHCLWDDSFPENPERLHAIKEQLILEGLLGRCVSFQARF 134
Query: 80 PAQIPQLLSFHTPDYIN--ELVEADKAGGKMVCDGTV----LNPGSWGAALLAVGTTLSA 133
A+ +L+ H+ +YI+ E + G V GT L+P S+ A LA G+ L
Sbjct: 135 -AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAGTYDSVYLHPNSYSCACLATGSVLRL 193
Query: 134 MKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDV 192
+ V+ + A++RPPGHHAQ ++ DGYC N+ +A + A +++++D DV
Sbjct: 194 VDAVMGAEIRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDV 253
Query: 193 HYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-G 250
H+G GT F + VL S+H HG + P H + G G+G GY +N+P G
Sbjct: 254 HHGQGTQFIFDQDPSVLYFSIHRYEHGRFWP-HLKASNWSTTGFGQGQGYTINVPWNQVG 312
Query: 251 TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSL 310
D Y+ A +++P +F+P ++++ G D+ DP G T G+ + + L
Sbjct: 313 MRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKGEMSATPAGFAHLTHFLMGL 372
Query: 311 ADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
A GG+L++ EGGY++ A + +L +L P +L P+A
Sbjct: 373 A----GGKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVA 414
>gi|115523092|ref|YP_780003.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
BisA53]
gi|115517039|gb|ABJ05023.1| histone deacetylase superfamily [Rhodopseudomonas palustris BisA53]
Length = 309
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE +DR++ + L + + + + HT +I EL + G +
Sbjct: 20 HPERADRLRAVNQGLAEARFAA-LQRGEAPEGDLDTIALCHTDHHIVELRQMAPENGLIF 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
D T ++PG+W AAL +VG +A V+ G A+ RPPGHHA+ G+CF
Sbjct: 79 VDSDTSMSPGTWEAALRSVGGATTATDAVMTGKVTNAFVSTRPPGHHAEIGKPMGFCFFG 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NA +A + A G + V+D DVH+GNGT E F+ V+ S H P P
Sbjct: 139 NAAIAARYAQRKYGIARAAVVDFDVHHGNGTQEIFWADPTVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G + E GE + +N PL + G + A +L++P +++F P +IV+ G D+
Sbjct: 194 GAMSERGEHDNI---VNAPLQSEDGSDKFRSAFEDLILPRLKQFAPELIVISAGFDAHCR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + + + R + +AD +GGR++ V EGGY
Sbjct: 251 DPLASLNLQTEDFAWVTRRLMDVADATAGGRIVSVLEGGY 290
>gi|343516583|ref|ZP_08753618.1| acetylpolyamine aminohydrolase [Vibrio sp. N418]
gi|342796168|gb|EGU31863.1| acetylpolyamine aminohydrolase [Vibrio sp. N418]
Length = 347
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 131/263 (49%), Gaps = 13/263 (4%)
Query: 89 FHTPDYINELVEADKAG--GKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIA 145
F +P ++ + D G G D T + SW A A L+A ++ G +
Sbjct: 93 FISPRHLRHRIPKDIEGKLGYYSFDMTAAITKTSWEAIQSATDCALTAADLIMQGEQSV- 151
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRS 205
+AL RPPGHHA P + GYC++NNA +A + G KV ++D+D H+GNGT FY
Sbjct: 152 FALCRPPGHHAAPDLMGGYCYINNAAIAAESLRRQGKEKVAILDVDYHHGNGTQSIFYER 211
Query: 206 NKVLTISLHMNHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELV 264
+ VL +S+ HG +P G DE+GEG G G+NLN+PLP G D +
Sbjct: 212 DDVLFVSI---HGDPDYDYPHYIGFADEVGEGAGEGFNLNLPLPQGKTDWTLYGPALQTA 268
Query: 265 VPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
+ IQ+F + +V+ +G D+ DP L D Y E+GR + L L V E
Sbjct: 269 LEKIQQFGADALVISLGMDTYEHDPISYFKLNRDNYAEIGRQLGQLQ-----LPTLFVFE 323
Query: 325 GGYHVTYSAYCLHATLEGVLNLP 347
GGY V + A L+G +N P
Sbjct: 324 GGYAVDDLGHNTVAVLDGYMNSP 346
>gi|398859482|ref|ZP_10615157.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM79]
gi|398236831|gb|EJN22601.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM79]
Length = 344
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 157/347 (45%), Gaps = 55/347 (15%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPI------ 69
++ VF D L+H G L D P F + P +D +++ V + G I
Sbjct: 1 MLTVFSDSHRLHH--GTELKDGVLKPSF-----EQPSRADTVRDRVQHVGLGDIIVPRTF 53
Query: 70 ----------SPYISW--------------HSGIPAQIP--QLLSFHTPDYINELVEADK 103
Y+S+ H +P P L + H P +I+ K
Sbjct: 54 DRACYVNAHSERYVSFLETAWSEWTATGREHDALPLVWPVRDLSNEHVPAFID-----GK 108
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
G + G+ + +W A + L+ + + +GH A+AL RPPGHHA G
Sbjct: 109 LGFFAMDAGSPITATTWDAVKTSADIALTGLSLINEGHNS-AFALCRPPGHHAAREYMGG 167
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
YC+LNNA +A Q AL G +V V+D+D H+GNGT FY N V+ SL HG S
Sbjct: 168 YCYLNNAAIAAQHALTQGAKRVAVLDVDFHHGNGTQNIFYNRNDVMFASL---HGEPSVS 224
Query: 224 HP-QNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P +G E G G G GYNLN PLP T + Y +A+ ++ F P ++V+ +G
Sbjct: 225 YPYYSGFSSECGTGAGEGYNLNYPLPKNTTWQSYQNALMH-ACKKLRSFSPELLVISLGV 283
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
D+ DP L D + MG I+ ++ G L V EGGY V
Sbjct: 284 DTFKDDPISHFLLESDDFFGMGEIIATV-----GAPTLFVMEGGYMV 325
>gi|83593948|ref|YP_427700.1| histone deacetylase superfamily protein [Rhodospirillum rubrum ATCC
11170]
gi|386350700|ref|YP_006048948.1| histone deacetylase superfamily protein [Rhodospirillum rubrum F11]
gi|83576862|gb|ABC23413.1| Histone deacetylase superfamily [Rhodospirillum rubrum ATCC 11170]
gi|346719136|gb|AEO49151.1| histone deacetylase superfamily protein [Rhodospirillum rubrum F11]
Length = 309
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 150/315 (47%), Gaps = 30/315 (9%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPI-------SPYISWHSGIPAQIPQLLSFHTP 92
DPG HPE DR++ + +L+ +P+++ QLL H
Sbjct: 15 DPGAF-----HPECPDRLRAVQRVLEAEDFMLLLRDEAPHVTR--------EQLLRVHPL 61
Query: 93 DYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRP 151
++ L++ G DG TV++P S AAL A G + A+ V+D + A+ VRP
Sbjct: 62 SHVEFLLDHVPREGTYHIDGDTVMSPDSGEAALRAAGGMVQAVDAVMDKSVRNAFVAVRP 121
Query: 152 PGHHAQPTMADGYCFLNNAGL-AVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLT 210
PGHHA+ A G+C NNA + A G +V VID DVH+GNGT F+ +
Sbjct: 122 PGHHAELATAMGFCLFNNAAIGAYHARARWGAERVAVIDWDVHHGNGTQHIFWDDPAMFY 181
Query: 211 ISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQK 270
S H H S P G VDE G G G +N PL +G + A TE + PA++
Sbjct: 182 ASTHEAH-----SFPNTGFVDETG---GHGNIVNCPLRSGADGLRFREAFTERITPALRA 233
Query: 271 FEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
F P++I++ G D+ DP L + + V +A+ R++ V EGGY +T
Sbjct: 234 FAPDLIIISAGFDAHVMDPMANLNLKVADFVWATEQVLDVANDVCDSRVVSVLEGGYDLT 293
Query: 331 YSAYCLHATLEGVLN 345
A C+ A ++ ++
Sbjct: 294 ALASCVSAHVKTLME 308
>gi|152981105|ref|YP_001354549.1| histone deacetylase superfamily protein [Janthinobacterium sp.
Marseille]
gi|151281182|gb|ABR89592.1| histone deacetylase superfamily protein [Janthinobacterium sp.
Marseille]
Length = 322
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 135/281 (48%), Gaps = 12/281 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE+ +R+K ++ L R P + W Q+L HT D++ ++ +A G M
Sbjct: 32 HPESPERLKAVLRAL-RVPEFDAVEWRDAPMGTREQVLLIHTEDFVTDVEDASPHRGYMP 90
Query: 110 CDG--TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
DG TV++PGS A + VG + + VLD + RP GHHA+P+ A G+C
Sbjct: 91 LDGGDTVMSPGSLEAVMRCVGAACAGVDLVLDNEAHNVFCATRPCGHHAEPSRAMGFCIY 150
Query: 168 NNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
N A +A A +V VID DVH+GNGT FY ++ S H +H +P
Sbjct: 151 NQAAIAAAYAYEVHKLERVAVIDFDVHHGNGTQAAFYDRPELFYASSHQSH-----FYPG 205
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
G E G +N+PLP G + ++PAI+ F P +I++ G D+
Sbjct: 206 TGLEKETGVSHNI---VNVPLPRGCDSALFREQTAAKMLPAIRAFNPELIIISAGFDAHH 262
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L D Y + R + +AD GR++ + EGGY
Sbjct: 263 LDPLAGLNLQDDDYDWVTRELMKIADETCEGRIVSILEGGY 303
>gi|149028424|gb|EDL83809.1| histone deacetylase 6 [Rattus norvegicus]
Length = 1012
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 156/306 (50%), Gaps = 21/306 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE RI I+ L+ ++ PA +LL+ H+ +Y+ L +K + +
Sbjct: 359 HPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHSAEYVERLRATEKMKTRDL 418
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + P ++ A LA G ++ VL G A+VRPPGHHA+P A G
Sbjct: 419 HREGANFESIYICPSTFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPGHHAEPDAACG 478
Query: 164 YCFLNNAGLAVQLA--LNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A + +++++D DVH+GNGT F VL +SLH + G++
Sbjct: 479 FCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTF 538
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G G G+ +N+P NG GD Y+ LV+P +F P ++++
Sbjct: 539 FPMGDE-GASSQVGRAAGTGFTVNVPW-NGPRMGDADYLATWHRLVLPIAYEFNPELVLI 596
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT----YSAY 334
G D++ DP G +T +GY + ++ LA GGR++++ EGGY++T A
Sbjct: 597 SAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLA----GGRIILILEGGYNLTSISESMAA 652
Query: 335 CLHATL 340
C H+ L
Sbjct: 653 CTHSLL 658
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 11/271 (4%)
Query: 89 FHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYAL 148
T Y+NE AG D L+P S+ A LA G+ L + V+ + A+
Sbjct: 12 METTQYMNEGELRVLAG---TYDSVYLHPNSYSCACLATGSVLRLVDAVMGAEIRNGMAV 68
Query: 149 VRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNK 207
+RPPGHHAQ ++ DGYC N+ +A + A +++++D DVH+G GT F +
Sbjct: 69 IRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQGTQFIFDQDPS 128
Query: 208 VLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVV 265
VL S+H HG + P H + G G+G GY +N+P G D Y+ A +++
Sbjct: 129 VLYFSIHRYEHGRFWP-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHILL 187
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEG 325
P +F+P ++++ G D+ DP G T G+ + + LA GG+L++ EG
Sbjct: 188 PVAFEFQPQLVLVAAGFDALHGDPKGEMSATPAGFAHLTHFLMGLA----GGKLILSLEG 243
Query: 326 GYHVTYSAYCLHATLEGVLNLPLALLSDPIA 356
GY++ A + +L +L P +L P+A
Sbjct: 244 GYNLHALAKGVSGSLHTLLGDPCPMLESPVA 274
>gi|448737608|ref|ZP_21719646.1| histone deacetylase superfamily protein [Halococcus thailandensis
JCM 13552]
gi|445803565|gb|EMA53855.1| histone deacetylase superfamily protein [Halococcus thailandensis
JCM 13552]
Length = 336
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 27/304 (8%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
LNHDTG +HPE+ DR++ I L Y+ + AQ
Sbjct: 10 LNHDTGP----------------RHPESPDRLRAIRQGLSSRHGVKYVEADAIDEAQA-- 51
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--K 143
+ H DY+ E+ E GG TV +W AAL + G + + LDG +
Sbjct: 52 -RAVHDDDYVAEIREFCADGGGQWDPDTVAVEATWEAALKSAGQAVWSAHEALDGADGRE 110
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFY 203
+A+ RPPGHHA A G+CFLNNA +A Q AL+ +V +ID DVH+GNG + FY
Sbjct: 111 TPFAIGRPPGHHAVADDAMGFCFLNNAAIAAQSALDGAADRVAIIDWDVHHGNGIQDIFY 170
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
V S+H +P +G + E GEG+G G N+ P G D Y+ + ++
Sbjct: 171 DRGDVFYCSIHER-----GLYPGSGEIGETGEGDGEGTTANVAFPAGGDDEAYLTTVDDV 225
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
P + +F+P+++++ G D+ DP R ++ +GY + +R LA+R G L V
Sbjct: 226 FAPLLAEFDPDLLLVSAGFDAHEHDPISRMTVSTEGYGVLAARIRDLAERCDAG-LGFVL 284
Query: 324 EGGY 327
EGGY
Sbjct: 285 EGGY 288
>gi|449672323|ref|XP_002164574.2| PREDICTED: histone deacetylase 6-like [Hydra magnipapillata]
Length = 424
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 180/368 (48%), Gaps = 24/368 (6%)
Query: 18 NVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHS 77
NV W G++ +D F + H E RI +I + L + ++
Sbjct: 22 NVTWKTGLI--------YDQKMCEYFNLEDKNHVERPARISSIYNALNKNGLTCRCQILK 73
Query: 78 GIPAQIPQLLSFHTPDYINEL----VEADKAGGKMVCD--GTVLNPGSWGAALLAVGTTL 131
A ++L H ++ + + D+ GKM D +P S ++ L+VG TL
Sbjct: 74 SRFASHDEILLKHNEHHLKVIESLSTKTDEELGKMSFDYDSIYFHPNSSESSFLSVGCTL 133
Query: 132 SAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDI 190
++ VL + A+VRPPGHHA + G+C NN +A + A+ G +V+++D
Sbjct: 134 EVVEQVLKKNILNGVAIVRPPGHHALTHCSMGFCHFNNVAIAAEYAVKKYGLKRVLIVDW 193
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHM--NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL- 247
D+H+GNG + F N VL S+H N W P + G + +G+G+G G+N+N+
Sbjct: 194 DIHFGNGIHKMFENDNYVLYFSMHRYDNQRFW-PCLAE-GNYNSIGKGDGEGFNVNVAWN 251
Query: 248 PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIV 307
+G D Y+ A +++P +++ P ++++ G DS DP G +T GY +M + +
Sbjct: 252 KSGMNDADYILAFKHVLLPIAKEYNPELVLVSAGFDSGKGDPLGNCKVTPAGYAQMTKEL 311
Query: 308 RSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVK 367
SLAD G+++IV EGGY++ A + + L +L P+ ++ + + K
Sbjct: 312 MSLAD----GKVVIVLEGGYNLKTLASSMSSCLATLLGDPINVVINSNKSSLSAKQSVAK 367
Query: 368 VIESIKQY 375
+ +I++Y
Sbjct: 368 TLFAIQKY 375
>gi|307183184|gb|EFN70093.1| Histone deacetylase 6 [Camponotus floridanus]
Length = 1165
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 16/312 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEAD----KAG 105
HPE RI +I + + + G A + +L H+ DYI+ + K
Sbjct: 544 HPEKPSRISSIYNNHENYGLLERCHLLQGRSATLAELSLAHSKDYIDSIKRTSTLKPKEL 603
Query: 106 GKMVCD--GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
K D L+ +W +A ++ G L + VL+G + A+VRPPGHHA+ A G
Sbjct: 604 QKQASDYNSVYLHNETWSSACVSAGCLLKMVDAVLNGESQSGIAIVRPPGHHAEEDNACG 663
Query: 164 YCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+C NN +A Q A+ +V+++D DVH+GNGT F K+L IS+H ++GS+
Sbjct: 664 FCIFNNVAIAAQYAVQFHHLKRVLIVDWDVHHGNGTQSIFEEDPKILYISVHRYDNGSFF 723
Query: 222 P-SHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
P S N T L GEGF N+NIP G GD Y+ ++V+P +F P +I++
Sbjct: 724 PNSKRANYTSVGLNAGEGF--NVNIPWNKKGMGDAEYIAVFQQVVMPIAYQFNPELILVS 781
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHAT 339
G D+ DP G ++ + Y + + SLA+ GR+++ EGGY++ ++ +
Sbjct: 782 AGFDACVGDPLGGCLVSPELYGHLIHWLSSLAN----GRIILSLEGGYNINSISHAMTMC 837
Query: 340 LEGVLNLPLALL 351
+ +L PL +L
Sbjct: 838 TKALLGDPLPML 849
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
Query: 111 DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNA 170
D ++P ++ +LLAVG+T++ ++ + G + A++RPPGHHA + GYCF NN
Sbjct: 199 DAVFVHPSTYKLSLLAVGSTINLVESICKGEIQNGMAIIRPPGHHAMKSEYCGYCFFNNV 258
Query: 171 GLAVQLALNSG-CGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNG 228
+AV+ AL+S +++++D DVH+G T + FY +V+ S+H +G + P+ ++
Sbjct: 259 AIAVEKALSSNLANRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEYGEFWPNLKESD 318
Query: 229 TVDELGEGEGFGYNLNIPL-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
+GE G GYN NIPL G + Y+ ++++P +F+P++I++ G D++
Sbjct: 319 -FHYIGEDLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLIIVSAGYDAALG 377
Query: 288 DPNGRQCL 295
P C+
Sbjct: 378 CPEVNLCI 385
>gi|297569082|ref|YP_003690426.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
gi|296924997|gb|ADH85807.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
Length = 332
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 162/334 (48%), Gaps = 28/334 (8%)
Query: 22 DDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRG------PISPYISW 75
DD L HDTG HPE+ R++ + G P IS
Sbjct: 13 DDDFLQHDTGL----------------DHPESPARLQAVYQRQALGFPDHRLPAD-AIST 55
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKA-GGKMVCDGTVLNPGSWGAALLAVGTTLSAM 134
PA +L + HT +Y+ L EA A G + L+ ++ ALLA G L+A+
Sbjct: 56 LPPRPAARRELTAIHTEEYLLRLEEAALAERGYLDHPDNRLSYDTYRVALLAAGAGLAAI 115
Query: 135 KHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQL-ALNSGCGKVVVIDIDVH 193
+ + A AL+RPPGHHA+ + G+CFLNNA +A + K+++ID D H
Sbjct: 116 DRLEAANATAAGALIRPPGHHAERSTPLGFCFLNNAAVAARYWQQRHDRKKIMIIDWDAH 175
Query: 194 YGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGD 253
+GNG F +V +S+H H +W S P G +E G+G G G LN+PLP G+GD
Sbjct: 176 HGNGIQAAFEDDPEVFYLSIH-EHPTW--SFPGTGWSEERGQGAGRGTTLNLPLPPGSGD 232
Query: 254 RGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR 313
+ + E++ PA+Q F P +++ G D D + + YR +GR + A R
Sbjct: 233 DLVLRLLDEVIDPALQSFAPEALIIAAGFDGHHHDDMSGLSYSSELYRRLGRHAAASAAR 292
Query: 314 YSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
+ GRLL + EGGY CL LEG+L +P
Sbjct: 293 HCPGRLLFLLEGGYQPDLLVRCLGNFLEGLLAVP 326
>gi|398956601|ref|ZP_10676895.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
gi|398149713|gb|EJM38351.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
Length = 341
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 130/226 (57%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGEQTWRSAYWSAQSAIAGARALLDGE-PAAYALCRPPGHHARAEAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C++NNA +A Q+ L G +V V+D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 166 FCYVNNAAVAAQV-LRDGFARVAVLDTDMHHGQGIQEIFYDRDDVLYVSVHGDPTNFYPG 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G +E G G G G+NLN+P+ +G + ++ + E+ + A++ F ++VL +G D
Sbjct: 225 --VAGFAEERGAGVGEGFNLNLPMAHGASEADFLEQL-EVALKAVKDFGAEVLVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +RSL G LIVQEGGYH+
Sbjct: 282 IFKLDPQSKVAVTREGFAVLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|387815937|ref|YP_005431431.1| acetylpolyamine aminohydrolase aphA [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381340961|emb|CCG97008.1| putative Acetylpolyamine aminohydrolase aphA [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 337
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 130/220 (59%), Gaps = 11/220 (5%)
Query: 109 VCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ DG+ + +W AA + T L A ++ G + AYA+ RPPGHHA+ A G+C+L
Sbjct: 110 LADGSCPIGENTWKAAYWSAQTALGAADALIAGE-RNAYAVCRPPGHHARKDAAGGFCYL 168
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NNA +A + L S + V++D D+H+G G E FY + VL IS+H + ++ P +
Sbjct: 169 NNAAIAAE-HLKSRFPRTVILDTDMHHGQGIQEIFYDRSDVLYISIHGDPTNFYPV--VS 225
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G DE GEGEG+GYN+N+P+P+G+ + + + E + AI+ ++P++++L +G D
Sbjct: 226 GFEDERGEGEGYGYNINLPMPHGSSEDDFFAKLDE-ALAAIRLYQPDVLILTLGFDIYKN 284
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP + +T +G+ + +R L G L+VQEGGY
Sbjct: 285 DPQAKVSVTSEGFCRLSTHLRQL-----GLPTLVVQEGGY 319
>gi|338729036|ref|XP_001493915.3| PREDICTED: histone deacetylase 6-like [Equus caballus]
Length = 1187
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 178/365 (48%), Gaps = 37/365 (10%)
Query: 5 PSEPPS------PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIK 58
P +PP+ P + + +D M+ H L+D+ HPE R+
Sbjct: 462 PWQPPALPILTWPVLQARTGLVYDQRMMGH---YNLWDS-----------HHPEMPQRVS 507
Query: 59 NIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDG 112
I+ L+ ++ PA +LL+ H+ +Y+ L +K + + D
Sbjct: 508 RIMRRLEELHLAERCLTLPARPATDAELLTCHSAEYVGRLRATEKMKTRELHREGANFDS 567
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
+ P ++ A LA G ++ VL G A+VRPPGHHA+ A G+CF N+ +
Sbjct: 568 IYICPSTFACAQLATGAVCRLVEAVLAGEVLNGIAVVRPPGHHAEQDAACGFCFFNSVAV 627
Query: 173 AVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGT 229
A + A++ +++++D DVH+GNGT F VL ISLH +HG++ P + G
Sbjct: 628 AARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPLGDE-GA 686
Query: 230 VDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
++G+ G G+ +N+ NG GD Y+ A LV+P +F P ++++ G D++
Sbjct: 687 SSQMGQAAGTGFTVNVTW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARG 745
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
DP G ++ +GY + ++ LA+ G ++++ EGGY++T + + A +L P
Sbjct: 746 DPLGGCQVSPEGYAHLTHLLMGLAN----GHIILILEGGYNLTSISESMAACTRSLLGDP 801
Query: 348 LALLS 352
LL+
Sbjct: 802 PPLLT 806
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 168/337 (49%), Gaps = 19/337 (5%)
Query: 30 TGKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLL 87
+G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 84 SGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELM 142
Query: 88 SFHTPDYINELVEADKAGGKM-------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
H+ +YI+ L+E + + D L+P S+ A LA G+ L + VL
Sbjct: 143 LVHSLEYID-LMETTQYMNERELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGA 201
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ A++RPPGHHAQ ++ DGYC N+ +A + A +++++D DVH+G GT
Sbjct: 202 EIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHEIQRILIVDWDVHHGQGTQ 261
Query: 200 EGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYV 257
F + VL S+H G + P H + +G G+G GY +N+P G D Y+
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWP-HLKASDWSTIGFGQGRGYTINVPWNQVGMRDADYI 320
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
A +++P +F+P ++++ G D+ DP G T G+ + ++ LA GG
Sbjct: 321 AAFLHILLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAHLTHLLMGLA----GG 376
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDP 354
+L++ EGGY++ A + A+L +L P +L P
Sbjct: 377 KLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESP 413
>gi|422318114|ref|ZP_16399397.1| aminohydrolase [Achromobacter xylosoxidans C54]
gi|317407308|gb|EFV87281.1| aminohydrolase [Achromobacter xylosoxidans C54]
Length = 339
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 130/228 (57%), Gaps = 15/228 (6%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + P +W +A + ++ + G + AYAL RPPGHHA+ A G
Sbjct: 107 AARYLADGSCPVGPNTWQSAYWSAQCAIAGADRIAAG-DRHAYALCRPPGHHARRDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNNA +A Q L G+V ++D D+H+G G + FY + VL +S+H + ++ P
Sbjct: 166 FCYLNNAAIAAQR-LRGTYGRVAILDTDMHHGQGIQDIFYERSDVLYVSIHGDPENFYPV 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G GEG GYNLN+P+P+G+ + + + E AI++F+P+ +VL +G D
Sbjct: 225 --VAGFEDERGAGEGEGYNLNLPMPHGSPESVFFDRLREARA-AIEQFQPDALVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
DP ++ DG+ +GR V +G +L LIVQEGGY++
Sbjct: 282 IFEKDPQAMVAVSEDGFERLGREV-------AGLKLPTLIVQEGGYYI 322
>gi|421600019|ref|ZP_16043110.1| hypothetical protein BCCGELA001_19480 [Bradyrhizobium sp.
CCGE-LA001]
gi|404267872|gb|EJZ32461.1| hypothetical protein BCCGELA001_19480 [Bradyrhizobium sp.
CCGE-LA001]
Length = 309
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE DR++ + L ++ + + H Y+ EL G++
Sbjct: 20 HPERPDRLRAVEEALSHERFQ-FLVRDQAPEGDLDLVTLCHNEHYVTELRHIAPTSGQVY 78
Query: 110 CDG-TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLN 168
DG T ++PG+W A + VG ++A + V+ G + A+ VRPPGHHA+ G+CF +
Sbjct: 79 IDGDTSMSPGTWEAVMRGVGGAVAATEAVMAGEHRNAFVAVRPPGHHAEIGKPMGFCFFD 138
Query: 169 NAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
N +A + A G + ++D DVH+GNGT + F+ V+ S H P P
Sbjct: 139 NVAIAARHAQRKYGIKRAAIVDFDVHHGNGTQDIFWSDPTVMYCSTHQM-----PLFPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G E G+ + +N PL + G + A L++P ++KF P ++++ G D+
Sbjct: 194 GAKSERGDHDTI---VNAPLASEDGGPEFRSAFENLILPQLEKFSPELLIISAGFDAHYR 250
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP L + Y + R + LAD+ +GGR++ V EGGY
Sbjct: 251 DPLASLNLRAEDYAWVTRKLMDLADKSAGGRVVSVLEGGY 290
>gi|398843342|ref|ZP_10600488.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM102]
gi|398103202|gb|EJL93374.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM102]
Length = 341
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 130/222 (58%), Gaps = 11/222 (4%)
Query: 109 VCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ DG+ + +W +A + + ++ + +LDG AYAL RPPGHHA+ A G+C++
Sbjct: 111 LADGSCPVGEQTWRSAYWSAQSAIAGAQALLDGE-PAAYALCRPPGHHARAEAAGGFCYV 169
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NNA +A Q+ L +G +V V+D D+H+G G E FY VL +S+H + ++ P
Sbjct: 170 NNAAVAAQV-LRTGFERVAVLDTDMHHGQGIQEIFYERADVLYVSVHGDPTNFYPG--VA 226
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G DE G G G G+NLN+P+ +G + ++ + E+ + A+++F ++VL +G D
Sbjct: 227 GFSDERGVGVGEGFNLNLPMAHGASEADFLRQL-EVALAAVKEFGTQVLVLSLGFDIFEL 285
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + +T +G+ +G +RSL G LIVQEGGYH+
Sbjct: 286 DPQSKVAVTREGFARLGERIRSL-----GLPCLIVQEGGYHL 322
>gi|148906070|gb|ABR16194.1| unknown [Picea sitchensis]
Length = 648
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 171/328 (52%), Gaps = 18/328 (5%)
Query: 38 GFDPGFL---EVLEK---HPENSDRIKNIVSILKRGPISPYISWHSGIPAQ---IPQLLS 88
GFDP L EV K HPE DR++ I + L+ + P + IPA+ + +L
Sbjct: 257 GFDPRMLLHSEVQMKSHPHPERPDRLRAIAASLRAAGVFPAKLF--PIPAREVTLEELQK 314
Query: 89 FHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYAL 148
H+P +++ + T N S AA LA G V+ G + +AL
Sbjct: 315 IHSPQHVSSVETTSCRLSSYFTADTYTNEHSALAARLAAGLCAYLATEVMTGQVQNGFAL 374
Query: 149 VRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKV 208
VRPPGHHA T G+C NNA +A + A +G KV+++D DVH+GNGT E F N V
Sbjct: 375 VRPPGHHAGITDVMGFCLHNNAAIAARAAQAAGAKKVLIVDWDVHHGNGTQEIFEHDNSV 434
Query: 209 LTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPA 267
L ISLH + G G +P G +E+G +G G+++NIP + G GD Y+ +V+
Sbjct: 435 LYISLHRHEG--GRFYPGTGAANEVGSLDGEGFSVNIPWKHGGVGDEDYIFTFQHVVLLI 492
Query: 268 IQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
++F P++ ++ G D++ DP G +T G+ M +++ L + G+LL++ EGGY
Sbjct: 493 AEQFAPDLTIISAGFDAAKGDPLGGCEVTPFGFAYMTKMLSDLFE----GKLLVILEGGY 548
Query: 328 HVTYSAYCLHATLEGVLNLPLALLSDPI 355
++ + A ++ +L + ++D I
Sbjct: 549 NLRSISASATAVVKVLLGENMGFVTDDI 576
>gi|50553927|ref|XP_504372.1| YALI0E24893p [Yarrowia lipolytica]
gi|49650241|emb|CAG79971.1| YALI0E24893p [Yarrowia lipolytica CLIB122]
Length = 748
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 38/365 (10%)
Query: 45 EVLEKHPENSDRIKNIVSILKRG------------PISPYISWHSGIPAQIPQLLSFHTP 92
+ ++ HPE+ RI ++ L I P + A + ++L HTP
Sbjct: 111 DYVDPHPEDPRRIFSVYKALVDAGLVVDPEYLGLEDIGPLMEKIPIREASLDEVLEVHTP 170
Query: 93 DYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAY 146
+++ L +K + D N S+ A L+ G T+ + V++ + K A
Sbjct: 171 AHVDFLASTEKMNRPQLLEEGEKGDSVYFNNESFSAGKLSCGGTIETCRAVIERNVKNAI 230
Query: 147 ALVRPPGHHAQPTMADGYCFLNNAGLAVQLALN---SGCGKVVVIDIDVHYGNGTAEGFY 203
A+VRPPGHHA+P G+C +N +A ++ L +++++D DVH+GNGT F
Sbjct: 231 AVVRPPGHHAEPGNPAGFCMFSNVAVAAKVLLKRYPERVKRILILDWDVHHGNGTQRAFL 290
Query: 204 RSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMT 261
+VL ISLH +G + P G +G G G GY++NIP G GD Y++A
Sbjct: 291 DDPRVLYISLHQYENGKFYPGG-TFGAHTSVGTGAGEGYSVNIPWSAPGAGDADYIYAFQ 349
Query: 262 ELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLI 321
++V+P +F+P+ +++ G D++ D G +T GY M +++ LA G L +
Sbjct: 350 KVVMPIGMEFDPDFVIVSAGFDAAEGDLLGGCKITPSGYGHMTHMLKGLA----SGNLAV 405
Query: 322 VQEGGYHV---TYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
V EGGY + SA + L G LPL P A+ P V V+E+ QY
Sbjct: 406 VLEGGYTLEATAKSALAVTKVLLGEAPLPL-----PAAFKPTSATISVVQDVVETQSQYW 460
Query: 377 NDVIP 381
+ P
Sbjct: 461 RCLQP 465
>gi|377813304|ref|YP_005042553.1| histone deacetylase superfamily protein [Burkholderia sp. YI23]
gi|357938108|gb|AET91666.1| histone deacetylase superfamily [Burkholderia sp. YI23]
Length = 341
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 132/224 (58%), Gaps = 15/224 (6%)
Query: 109 VCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ DG+ + +W AA + + ++A V DG + AYAL RPPGHHA+P A G+C+L
Sbjct: 111 LADGSCPVGANTWRAAYWSAQSAIAAASAVNDG-AREAYALCRPPGHHARPAAAGGFCYL 169
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NNA +A Q +L S +V ++D D+H+G G E FY + VL +S+H + ++ P
Sbjct: 170 NNAAIAAQ-SLRSTFKRVAILDTDMHHGQGVQEIFYERDDVLYVSIHGDPTNFYPV--VT 226
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G +E G G G G+NLN+P+P+G + + M + + A+++FEP+ +VL +G D
Sbjct: 227 GYEEERGAGAGDGFNLNLPMPHGASETVFFD-MFDDALRALKRFEPDALVLALGFDIYKD 285
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
DP + +T +G+R +G + +L RL +I QEGGYH+
Sbjct: 286 DPQAQVAVTTEGFRRLGAAIGAL-------RLPSVIAQEGGYHL 322
>gi|319784714|ref|YP_004144190.1| histone deacetylase superfamily protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317170602|gb|ADV14140.1| histone deacetylase superfamily [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 308
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 144/305 (47%), Gaps = 20/305 (6%)
Query: 41 PGFLEVLEK--HPENSDRIKNIVSILKRGPIS--PYISWHSGIPAQIPQLLSFHTPDYIN 96
P FLE L HPE DR++ I +L + I G A I L H D++
Sbjct: 9 PIFLEHLTPPGHPERPDRLRAIERVLDEEAFAGLERIQAPEGDEATI---LYAHPADFVA 65
Query: 97 ELVEA--DKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
+ A D+ ++ D T +P SW AA+ A+G +A+ V G + RPPGH
Sbjct: 66 RVRAAIPDEGIARIDAD-TTASPKSWQAAITAIGAANAAVDDVFSGRADNVFVAARPPGH 124
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HA+ T A G+C N A +A + A G +V ++D DVH+GNGT + F+ VL S
Sbjct: 125 HAEKTTAMGFCLFNTAAIAARYAQKKHGVERVAIVDWDVHHGNGTQDIFWDDPSVLYCST 184
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H P +P G E G G +N PL TG + A V+PA+ F P
Sbjct: 185 HQM-----PLYPGTGAKTETGAGN----IVNAPLAPQTGSEVFRDAFLSRVLPALDNFAP 235
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
++I++ G D+ DP LT D + + A R+SG RL+ + EGGY + A
Sbjct: 236 DLIIISAGFDAHHRDPLAEINLTEDDFDWATGQLMQRAARHSGNRLVSLLEGGYDLQGLA 295
Query: 334 YCLHA 338
+ + A
Sbjct: 296 FSVAA 300
>gi|293604678|ref|ZP_06687078.1| acetylpolyamine aminohydrolase [Achromobacter piechaudii ATCC
43553]
gi|292816847|gb|EFF75928.1| acetylpolyamine aminohydrolase [Achromobacter piechaudii ATCC
43553]
Length = 354
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 132/231 (57%), Gaps = 14/231 (6%)
Query: 115 LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAV 174
+ P +W +AL + + ++A HV G +AYAL RP GHHA A G+C+LN++ A
Sbjct: 131 IGPQTWRSALRSTHSAVAAADHVASTSG-MAYALCRPSGHHAHRDRAGGFCYLNSSAAAA 189
Query: 175 QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELG 234
L + KV V+D+D H+G+GT FY+ V+T+SLH + G++ P + G +E G
Sbjct: 190 SRLLQT-WSKVAVLDVDAHHGDGTQNIFYQRADVMTVSLHADPGAYYPFY--TGYAEERG 246
Query: 235 EGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQC 294
G G G NLN+PL +G+G+ ++ A+ + + A+ + P +VL +G D+ DP
Sbjct: 247 YGAGEGCNLNLPLAHGSGNDPFLAAL-DTALTALSGYAPEALVLALGFDTYKDDPISVLK 305
Query: 295 LTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHVTYSAYCLHATLEGV 343
L +D YR++G V SL RL ++VQEGGY V L A L+G+
Sbjct: 306 LDIDAYRDIGARVASL-------RLPTVVVQEGGYMVQAIGPALDAFLQGI 349
>gi|448363792|ref|ZP_21552388.1| histone deacetylase [Natrialba asiatica DSM 12278]
gi|445645674|gb|ELY98674.1| histone deacetylase [Natrialba asiatica DSM 12278]
Length = 341
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 152/311 (48%), Gaps = 22/311 (7%)
Query: 40 DPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELV 99
DPG +HPE+SDR++ I LK+ Y+ G P + ++ + H YI +
Sbjct: 13 DPG-----SRHPESSDRLRAIRERLKKKHGVAYVE---GDPCSLDEIAAVHDRAYIESVE 64
Query: 100 EADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG--KIAYALVRPPGHHAQ 157
GG T +W A + G A+ L G +++ RPPGHHA
Sbjct: 65 SFCADGGGNWDPDTTAVEDTWDAVRYSAGQACWAVDAALSGATGRDTPFSIGRPPGHHAV 124
Query: 158 PTMADGYCFLNNAGLAVQLALNSGCGKV---VVIDIDVHYGNGTAEGFYRSNKVLTISLH 214
A G+CF+NN +A Q AL+ V ++D DVH+GNGT + FY V +S+H
Sbjct: 125 TDDAMGFCFVNNVAVAAQYALDRDDYDVDRVAIVDWDVHHGNGTQDIFYDREDVFFVSIH 184
Query: 215 MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPN 274
+P G +DE G G+ G +NIP+P GT D GY+ A+ + A++ F+P+
Sbjct: 185 EQ-----GLYPGTGDIDETGTGDATGTTMNIPMPAGTDDAGYLAAVDGPIAAALESFDPD 239
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTY--- 331
++++ G D+ DP R L+ + Y + +R+LAD + L V EGGY +
Sbjct: 240 LLLVSAGFDAHRHDPISRIRLSTEAYALLADRLRTLADD-TDASLAFVLEGGYGLNVLAD 298
Query: 332 SAYCLHATLEG 342
S +H T +G
Sbjct: 299 SVSIVHETFDG 309
>gi|335419343|ref|ZP_08550398.1| histone deacetylase superfamily protein [Salinisphaera shabanensis
E1L3A]
gi|335420984|ref|ZP_08552014.1| histone deacetylase superfamily protein [Salinisphaera shabanensis
E1L3A]
gi|334893158|gb|EGM31376.1| histone deacetylase superfamily protein [Salinisphaera shabanensis
E1L3A]
gi|334896960|gb|EGM35102.1| histone deacetylase superfamily protein [Salinisphaera shabanensis
E1L3A]
Length = 339
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 133/240 (55%), Gaps = 11/240 (4%)
Query: 106 GKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
+ DG+ + G+W AA + T L+A +L G + AY L RPPGHHA+ A G+
Sbjct: 108 ARYQADGSCPIGEGTWKAAYASAQTALTAADDILAGE-RFAYGLCRPPGHHARRDGAGGF 166
Query: 165 CFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
C+LNNA +A + AL + +V ++D D+H+G G E F+ + VL IS+H + ++ P
Sbjct: 167 CYLNNAAIAAE-ALRTKFQRVAILDPDMHHGQGIQEIFWERDDVLYISIHGDPTNFYPV- 224
Query: 225 PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
G DE G G G+GYN+N+P+P+G+ + + + E V AI+ F +++VL +G D
Sbjct: 225 -VTGHADERGAGAGYGYNINLPMPHGSPEETFFEKLDE-AVAAIKLFGADVLVLPLGFDI 282
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
DP + +T +G+ +G+ + L + ++QEGGY V + H G+L
Sbjct: 283 YENDPQAKVSVTTEGFARIGKAMAEL-----DMPVCVIQEGGYDVDHLQDNAHQFFSGLL 337
>gi|296775670|gb|ADH42947.1| deacetylase protein [uncultured SAR11 cluster alpha proteobacterium
H17925_23J24]
Length = 306
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 153/313 (48%), Gaps = 34/313 (10%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSG 78
+ D LNHDTG+G HPE +DRI ++ LK+
Sbjct: 5 IITTDSYLNHDTGQG----------------HPERADRISVVIENLKKN-----KKLIWK 43
Query: 79 IPAQIPQ--LLSFHTPDYINELVEADKAGGKMVCDG-TVLNPGSWGAALLAVGTTLSAMK 135
P + + L H +YI+E+ ++ G DG T+++PGS A+ AV + ++A+
Sbjct: 44 KPLRFDKKYLKITHKSNYIDEVEKSFPKKGLHFLDGDTIVSPGSKQASSDAVASIITAID 103
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHY 194
V + K + VRPPGHHA+ A G+C NN + + K+ +ID DVH+
Sbjct: 104 SVQNKEFKNVFCPVRPPGHHAEKDKAMGFCIYNNVAVGAHYIIEKYKLNKIAIIDFDVHH 163
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGT + FY + KVL IS H P +P G +E G+ LNIPLP GT
Sbjct: 164 GNGTQDIFYDNEKVLYISTHQ-----YPFYPGTGANNEKGKHNNV---LNIPLPAGTNSE 215
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
Y++A E V+ +++F+P+ ++ G D+ DP + L + ++ + +A+
Sbjct: 216 EYMNAY-EHVLKKLREFKPHFVLFSAGFDAHENDPLAQFRLKSKDFYDITKRTLEVANES 274
Query: 315 SGGRLLIVQEGGY 327
S +++ V EGGY
Sbjct: 275 SNSKVVSVLEGGY 287
>gi|338739779|ref|YP_004676741.1| histone deacetylase [Hyphomicrobium sp. MC1]
gi|337760342|emb|CCB66173.1| Histone deacetylase family protein [Hyphomicrobium sp. MC1]
Length = 314
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 147/312 (47%), Gaps = 16/312 (5%)
Query: 41 PGFLE--VLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSF-HTPDYINE 97
P FLE E HPE DR++ I L + + ++ H P ++ +
Sbjct: 9 PAFLEHDTGEHHPERPDRMRAIDKALSASVFDDLFHRDAPLREDDKTYIAMTHGPAHLAD 68
Query: 98 L---VEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGH 154
+ +E G + V T+ + G+W AA AVG L A+ V++G A+ VRPPGH
Sbjct: 69 VTAAIEHIDGGARHVDSDTIASAGTWEAARRAVGAGLDAVDLVMEGKVTNAFCQVRPPGH 128
Query: 155 HAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HA+ A G+CF NN +A A G +V V+D DVH+GNGT E F+ + S
Sbjct: 129 HAESNRAMGFCFFNNIAIAAHYARAKYGAERVAVVDFDVHHGNGTQEIFWSDKDLFYGST 188
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H P P G ++E G G F N PL +G G + A ++ + F P
Sbjct: 189 HQM-----PLFPGTGALNETGVGNIF----NAPLRSGDGREAFEEAFRSRILTPLHNFSP 239
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
+++++ G D+ DP L + +R + +A R++ GR++ + EGGY + A
Sbjct: 240 DVLLISAGFDAHQRDPLAGLELVEEDFRWATEALAEMARRHAKGRIVSMLEGGYDLKGLA 299
Query: 334 YCLHATLEGVLN 345
A ++ +L+
Sbjct: 300 LSTAAHVKALLD 311
>gi|359393932|ref|ZP_09186985.1| Acetylpolyamine aminohydrolase [Halomonas boliviensis LC1]
gi|357971179|gb|EHJ93624.1| Acetylpolyamine aminohydrolase [Halomonas boliviensis LC1]
Length = 340
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 132/226 (58%), Gaps = 11/226 (4%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W +A + + ++ + +L G + AYAL RPPGHHA A G
Sbjct: 107 AARYLADGSAPVGQDTWQSAYCSAQSAVAGAEALLAG-DRFAYALSRPPGHHAGIDSAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+CFLNNA +A Q L S ++VV+D D+H+G G E FY+ + VL IS+H + ++ P+
Sbjct: 166 FCFLNNAAIAAQ-HLTSRYPRIVVLDPDMHHGQGIQEIFYQRDDVLYISIHGDTTNFYPA 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
+G +E G+G G GYN+N+P+P+G+ + + + E AI+ FEP+ IVL +G D
Sbjct: 225 --VSGFENERGQGAGLGYNINLPMPHGSEESVFFDHL-EQACQAIRLFEPDAIVLALGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
DP + ++ G+ E+GR V L L+VQEGGY++
Sbjct: 282 IYERDPQAKVAVSTAGFGELGRKVAGL-----NVPTLVVQEGGYYL 322
>gi|300692103|ref|YP_003753098.1| histone deacetylase superfamily protein [Ralstonia solanacearum
PSI07]
gi|299079163|emb|CBJ51831.1| putative enzyme, Histone deacetylase superfamily [Ralstonia
solanacearum PSI07]
Length = 307
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 150/295 (50%), Gaps = 17/295 (5%)
Query: 41 PGFL--EVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL 98
P FL E+ HPE DR++ I L I ++ PA QL H P+Y+ EL
Sbjct: 9 PEFLKHEMGRHHPECPDRLRAIEDQLIASRIDQFLVPCEAPPATEVQLCRVHRPEYVREL 68
Query: 99 VEADKAGGKMVCD-GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
V + G + D T +NP ++ AA+LA G + A V+ G + A+ VRPPGHHA+
Sbjct: 69 VASVPVAGYVPIDPDTAMNPHTYMAAVLAAGAAVQATDKVIAGELENAFCCVRPPGHHAE 128
Query: 158 PTMADGYCFLNNAGLAVQLALN-SGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
P A G+CF NN +A + AL+ G +V ++D DVH+GNGT F +VL S +
Sbjct: 129 PGRAMGFCFFNNVAVAARHALDHHGLARVAIVDFDVHHGNGTEATFRDEPRVLMCSFFQH 188
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNL-NIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
P +P +GT EG N+ NIPLP T + + +P ++ F+P M
Sbjct: 189 -----PFYPYSGT-------EGVAANMVNIPLPAYTNGLTVREVVETIWLPRLEAFQPEM 236
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
+ + G D+ D G+ L Y + R + +A ++ GR++ EGGY+++
Sbjct: 237 LFISAGFDAHREDDLGQMGLVEADYAWITRQLMLVARTHAKGRIVSCLEGGYNLS 291
>gi|448725444|ref|ZP_21707899.1| histone deacetylase superfamily protein [Halococcus morrhuae DSM
1307]
gi|445798291|gb|EMA48706.1| histone deacetylase superfamily protein [Halococcus morrhuae DSM
1307]
Length = 336
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 150/304 (49%), Gaps = 27/304 (8%)
Query: 26 LNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQ 85
LNHDTG +HPE+ DR++ I L Y+ + AQ
Sbjct: 10 LNHDTGP----------------RHPESPDRLRAIRQGLSSRHGVEYVEADAIDEAQA-- 51
Query: 86 LLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGH--GK 143
+ H +Y+ E+ E GG TV +W AAL + G + + LDG +
Sbjct: 52 -RAVHDDEYVEEVREFCADGGGQWDPDTVAVEATWEAALKSAGQAVWSAHEALDGTEGRE 110
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFY 203
+A+ RPPGHHA A G+CFLNNA +A Q AL+ +V +ID DVH+GNG + FY
Sbjct: 111 TPFAIGRPPGHHAVADDAMGFCFLNNAAIAAQSALDGAAERVAIIDWDVHHGNGIQDIFY 170
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTEL 263
+ V S+H +P +G V E GEG+G G N+ P G D Y+ + ++
Sbjct: 171 DRDDVFYCSIHER-----GLYPGSGEVGETGEGDGEGTTANVAFPAGGDDDAYLATIDDV 225
Query: 264 VVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQ 323
P + +F+P+++++ G D+ DP R ++ +GY + VR LA+R G L V
Sbjct: 226 FAPLLTEFDPDLLLVSAGFDAHEHDPISRMTVSTEGYGVLAARVRDLAERCDAG-LGFVL 284
Query: 324 EGGY 327
EGGY
Sbjct: 285 EGGY 288
>gi|334116594|ref|ZP_08490686.1| histone deacetylase superfamily [Microcoleus vaginatus FGP-2]
gi|333461414|gb|EGK90019.1| histone deacetylase superfamily [Microcoleus vaginatus FGP-2]
Length = 307
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 140/303 (46%), Gaps = 21/303 (6%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIP------AQIPQLLSFHTPDYINELVEADK 103
HPE +R+ I + LK P + I W P A + H+ YI E+
Sbjct: 19 HPERPERLTAIANALKAAPWAAQIEWQLPTPVAHREKALFSAIKKVHSQRYIKEVEHLAH 78
Query: 104 AGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG + T ++ S+ ALLA L + V+ G+ A+ L RPPGHHA+ A G
Sbjct: 79 RGGGYLDGDTPISAESYDVALLAASAWLDGVDRVVAA-GEPAFVLARPPGHHAENARAMG 137
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222
+C +NA +A AL G +V V+D DVH+GNGT ++ SLH + P
Sbjct: 138 FCLFSNAAIAAHYALEQPGINRVAVLDWDVHHGNGTQSLVENCRQIAYCSLHQS-----P 192
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+P G +E G + LNIPL G G Y+ A LVVP + FEP+++++ G
Sbjct: 193 CYPGTGDAEERG---AYDNVLNIPLYPGGGIAEYLSAFESLVVPFLSNFEPDLLIVSAGY 249
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
D++A DP L Y + R + G EGGY + A + AT++
Sbjct: 250 DATASDPLASMTLAPSDYGTFTGYCLQITRRIAFG-----LEGGYALKELAESVVATIDR 304
Query: 343 VLN 345
LN
Sbjct: 305 CLN 307
>gi|410988605|ref|XP_004000574.1| PREDICTED: histone deacetylase 6 [Felis catus]
Length = 1136
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 176/358 (49%), Gaps = 19/358 (5%)
Query: 30 TGKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLL 87
+G GL FD + + PE +R+ I +++ G + +S+ + A+ +L+
Sbjct: 84 SGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKDELM 142
Query: 88 SFHTPDYINELVEADKAGGKM-------VCDGTVLNPGSWGAALLAVGTTLSAMKHVLDG 140
H+ +YI+ L+E + + D L+P S+ A LA G+ L + VL
Sbjct: 143 LVHSLEYID-LMETTQYMNERELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGK 201
Query: 141 HGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTA 199
+ A++RPPGHHAQ ++ DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 202 EIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGTQ 261
Query: 200 EGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYV 257
F + VL S+H G + P H + +G G G GY +N+P G D Y+
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWP-HLKASNWSTIGFGHGQGYTINVPWNQVGMRDADYI 320
Query: 258 HAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
A L++P +F+P ++++ G D+ DP G T G+ + ++ LA+ G
Sbjct: 321 AAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAHLTHLLMGLAE----G 376
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
+L++ EGGY++ A + A+L +L P +L P A P A +E+++ +
Sbjct: 377 KLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSALASLCCALEALEPF 434
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 160/314 (50%), Gaps = 17/314 (5%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV 109
HPE R+ I+ L+ ++ PA +LL+ H+ +Y+ L +K + +
Sbjct: 500 HPEMPQRVLRIMQRLEELGLAGRCLALPARPATEAELLTCHSAEYVGRLRATEKMKTREL 559
Query: 110 ------CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
D + P ++ A LA G ++ VL G A+VRPPGHHA+ A G
Sbjct: 560 HREGSNFDSIYICPSTFACAQLATGAVCRLVEAVLAGEVLNGTAVVRPPGHHAERDAACG 619
Query: 164 YCFLNNAGLAVQ--LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSW 220
+CF N+ +A + A++ +++++D DVH+GNGT F VL ISLH + G++
Sbjct: 620 FCFFNSVAVAARHAQAISGQALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDRGTF 679
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVL 278
P + G ++G G G+ +N+ NG GD Y+ A LV+P +F P ++++
Sbjct: 680 FPM-GEEGASSQIGRAAGTGFTVNVAW-NGPRVGDADYLAAWHRLVLPIAYEFNPELVLV 737
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHA 338
G D++ DP G ++ +GY + ++ LA+ GR++++ EGGY++T + + A
Sbjct: 738 SAGFDAAWGDPLGGCQVSPEGYAHLTHLLMGLAN----GRIILILEGGYNLTSISESMAA 793
Query: 339 TLEGVLNLPLALLS 352
+L P LL+
Sbjct: 794 CTRSLLGDPPPLLT 807
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,146,932,076
Number of Sequences: 23463169
Number of extensions: 340567069
Number of successful extensions: 709648
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5351
Number of HSP's successfully gapped in prelim test: 789
Number of HSP's that attempted gapping in prelim test: 688829
Number of HSP's gapped (non-prelim): 7036
length of query: 386
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 242
effective length of database: 8,980,499,031
effective search space: 2173280765502
effective search space used: 2173280765502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)