BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048339
(386 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94EJ2|HDA8_ARATH Histone deacetylase 8 OS=Arabidopsis thaliana GN=HDA8 PE=2 SV=1
Length = 377
Score = 567 bits (1461), Expect = e-161, Method: Compositional matrix adjust.
Identities = 261/372 (70%), Positives = 321/372 (86%), Gaps = 2/372 (0%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
++VFW +GML HD +G+FDTG+DPGFL+VLEKHPEN+DR++N++SIL+RGPI+P+++W
Sbjct: 6 VDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHVNWF 65
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGKM-VCDGTVLNPGSWGAALLAVGTTLSAMK 135
+G+PA + +LL FHT +YI +LVEADK+G + + GT ++PGSW AALLA GTTLSAM+
Sbjct: 66 TGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPGSWEAALLAAGTTLSAMQ 125
Query: 136 HVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSG-CGKVVVIDIDVHY 194
H+LD HGKIAYALVRPPGHH+QPT ADGYCFLNNA LAV+LALNSG C +V VIDIDVHY
Sbjct: 126 HILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHY 185
Query: 195 GNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDR 254
GNGTAEGFY S+KVLT+SLHMNHGSWG SHPQ G++DELGE G GYNLN+PLPNGTGDR
Sbjct: 186 GNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDR 245
Query: 255 GYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRY 314
GY +AM ELVVPA+++F P+M+VLVVGQDSSAFDPNGRQ LTM+GYR +G+I+R +A+ +
Sbjct: 246 GYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEH 305
Query: 315 SGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQ 374
S GRLL+VQEGGYHVTY+AYCLHA LEGVL +P LSDPIAYYPE+EA V +ESIK
Sbjct: 306 SHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEEEANAVAAVESIKT 365
Query: 375 YQNDVIPFLKGS 386
Y + +PFL+G+
Sbjct: 366 YHTEFVPFLRGT 377
>sp|O30107|Y130_ARCFU Uncharacterized protein AF_0130 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_0130 PE=3 SV=1
Length = 359
Score = 198 bits (503), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 172/317 (54%), Gaps = 15/317 (4%)
Query: 50 HPENSDRIKNIVSILKRGPI--SPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
HPE +R+ + L+ I S I A + +L HT +Y+ L K GG
Sbjct: 20 HPERRERLAYTMDQLREEGIFESERIVLLEPFKASLEDVLEVHTEEYVRFLEMESKKGGI 79
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
+ D T + G + ALLA G + A + VL+ + A+A++RPPGHHA+P + G+C+L
Sbjct: 80 IDFD-TNIPVGVFDRALLAAGGAIRAAQAVLNKECENAFAMIRPPGHHAKPYIGAGFCYL 138
Query: 168 NNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQN 227
NN + V+ L G ++ ++D D H+G+GT E FY ++VL IS H P +P
Sbjct: 139 NNMAIMVKWLLKQGFERIAILDWDAHHGDGTQEIFYNDDRVLFISTHQM-----PLYPGT 193
Query: 228 GTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAF 287
G +E G G+G GY +NIPLP GTGD GY+ + E++ P + +F+P I + GQD+
Sbjct: 194 GYPEECGTGKGEGYTVNIPLPPGTGDEGYMMVIDEIIEPVVNEFKPQFIAISAGQDNHFT 253
Query: 288 DPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT----YSAYCLHATLEGV 343
DP LT GY EM R ++A+++ GRL+ V EGGY V Y+ + A + G
Sbjct: 254 DPITSLALTARGYAEMMRRAVAMAEKHCDGRLVAVLEGGYSVEGALPYTNLGIIAAMAG- 312
Query: 344 LNLPLALLSDPIAYYPE 360
L+ + +P Y PE
Sbjct: 313 --FDLSAIREPENYLPE 327
>sp|Q70I53|HDAH_ALCSD Histone deacetylase-like amidohydrolase OS=Alcaligenes sp. (strain
DSM 11172) GN=hdaH PE=1 SV=3
Length = 369
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 13/304 (4%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADK--AGGK 107
HP+ R +V G I +++ + + A +L H+ ++ + GG
Sbjct: 39 HPDTKRRFHELVC--ASGQIE-HLTPIAAVAATDADILRAHSAAHLENMKRVSNLPTGGD 95
Query: 108 MVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFL 167
T++ G A L+ G + + V G YALV PPGHHA A G+C
Sbjct: 96 TGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPGHHAPHNAAMGFCIF 155
Query: 168 NNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQ 226
NN +A A G +V ++D DVH+GNGT + ++ VLTISLH H + P
Sbjct: 156 NNTSVAAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLH-QHLCFPP---D 211
Query: 227 NGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSA 286
+G E G G G GYN+N+PLP G+G+ Y+HAM ++V+ A++ + P +I++ G D+S
Sbjct: 212 SGYSTERGAGNGHGYNINVPLPPGSGNAAYLHAMDQVVLHALRAYRPQLIIVGSGFDASM 271
Query: 287 FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLE---GV 343
DP R +T DG+R+M R A GR++ VQEGGY Y +C A +E GV
Sbjct: 272 LDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGGYSPHYLPFCGLAVIEELTGV 331
Query: 344 LNLP 347
+LP
Sbjct: 332 RSLP 335
>sp|Q8RX28|HDA5_ARATH Histone deacetylase 5 OS=Arabidopsis thaliana GN=HDA5 PE=2 SV=1
Length = 660
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 185/376 (49%), Gaps = 46/376 (12%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G E HPE DRI+ I L+ +S
Sbjct: 27 VGLIYDETMCKHDTPDG--------------EDHPECPDRIRVIWEKLQLAGVSQRCVVL 72
Query: 77 SGIPAQIPQLLSFHTPDYINELVEADKAGGK--------MVCDGTVLNPGSWGAALLAVG 128
A+ L HT D++N LV++ K + LN GS AA LA G
Sbjct: 73 GSSKAEDKHLQLVHTKDHVN-LVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAG 131
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V +G +A+VRPPGHHA+ A G+C NN +A LN G K
Sbjct: 132 SVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKK 191
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D DVH+GNGT + F++ +VL S+H + +G + P+ +G + +GEG G G+N+
Sbjct: 192 ILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAG-DDGDYNMVGEGPGEGFNI 250
Query: 244 NIPLPNG-TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P G GD Y+ A +++P ++F P++I L G D++ DP G C+T GY
Sbjct: 251 NVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSV 310
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHV----TYSAYCLHATLEGVLNLPLALLSDPIAYY 358
M + + A G++++ EGGY++ S C+ LE + P Y
Sbjct: 311 MLKKLMEFAQ----GKIVLALEGGYNLDSIAKSSLACVQVLLED------KQIQGPPEAY 360
Query: 359 PEDEAFPVKVIESIKQ 374
P + + +VI+++++
Sbjct: 361 PFESTW--RVIQAVRK 374
>sp|Q8LRK8|HDA18_ARATH Histone deacetylase 18 OS=Arabidopsis thaliana GN=HDA18 PE=2 SV=1
Length = 682
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 175/343 (51%), Gaps = 38/343 (11%)
Query: 17 INVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISWH 76
+ + +D+ M HDT G D E DRI+ I L+ ++
Sbjct: 60 VGLVYDETMCKHDTPNGKVDV--------------ECPDRIRVIWEKLQLAGVTQRCVVL 105
Query: 77 SGIPAQIPQLLSFHTPDYINELVEA------DKAGGKMVC--DGTVLNPGSWGAALLAVG 128
G A+ L HT ++N LV++ D K+ D LN GS AA LA G
Sbjct: 106 GGSKAEDKHLKLVHTKKHVN-LVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAG 164
Query: 129 TTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS----GCGK 184
+ + + V +G +A+VRPPGHHA+ A G+C NN +A LN K
Sbjct: 165 SVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKK 224
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNL 243
++++D D+H+GNGT + F++ ++VL S+H +HGS+ P +G + +GEG G G+N+
Sbjct: 225 ILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYP-FGDDGDFNMVGEGPGEGFNI 283
Query: 244 NIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYRE 302
N+P G GD Y+ +++P ++F+P++I+L G D++ DP G C+T GY
Sbjct: 284 NVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSV 343
Query: 303 MGRIVRSLADRYSGGRLLIVQEGGYHV----TYSAYCLHATLE 341
M ++ L + ++ G++++ EGGY++ S C+ LE
Sbjct: 344 M---LKKLME-FAHGKIVLALEGGYNLESLGKSSLACVQVLLE 382
>sp|P53973|HDA1_YEAST Histone deacetylase HDA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HDA1 PE=1 SV=1
Length = 706
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 186/361 (51%), Gaps = 31/361 (8%)
Query: 42 GFLEVLEKHPENSDRIKNIVSILKRGPI--SPYIS-------WHSGIP---AQIPQLLSF 89
+ E ++ HPE+ RI I IL + P +S IP A ++L
Sbjct: 75 SYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEV 134
Query: 90 HTPDYINELVEADKAGGKMVC------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGK 143
HT +++ + +K + + D N S+ +A L G + A K V++G K
Sbjct: 135 HTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEACKAVVEGRVK 194
Query: 144 IAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCGKVVVIDIDVHYGNGTAE 200
+ A+VRPPGHHA+P A G+C +N +A + L + +++++D D+H+GNGT +
Sbjct: 195 NSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQK 254
Query: 201 GFYRSNKVLTISLH-MNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVH 258
FY+ ++VL +SLH G + P Q G D+ GEG+G G+N NI P G GD Y+
Sbjct: 255 SFYQDDQVLYVSLHRFEMGKYYPGTIQ-GQYDQTGEGKGEGFNCNITWPVGGVGDAEYMW 313
Query: 259 AMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGR 318
A ++V+P ++F+P+++++ G D++ D G+ +T Y M +++SLA G
Sbjct: 314 AFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKSLA----RGN 369
Query: 319 LLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPIAYYPEDEAFPV--KVIESIKQYQ 376
L +V EGGY++ A + + ++ P L DP++ P+ E + KVI +Y
Sbjct: 370 LCVVLEGGYNLDAIARSALSVAKVLIGEPPDELPDPLS-DPKPEVIEMIDKVIRLQSKYW 428
Query: 377 N 377
N
Sbjct: 429 N 429
>sp|Q20296|HDA6_CAEEL Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=2 SV=2
Length = 955
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 164/339 (48%), Gaps = 20/339 (5%)
Query: 19 VFWDDGMLNHDTGKGLFDTGFDPGFLE----VLEKHPENSDRIKNIVSILKRGPISPYIS 74
+ ++D N TG L GF+ E V HPE+SDRI I L + I +
Sbjct: 1 MLFEDRQKNRSTGPTLI--GFNQTQNEHENTVCPTHPESSDRILKIKEALTKTKILEKCT 58
Query: 75 WHSG-IPAQIPQLLSFHTPDYINELVEADKAGGKMV---C---DGTVLNPGSWGAALLAV 127
+ + L H + +L+E++K + + C D + S A V
Sbjct: 59 VLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQEDINSQCEKYDSVFMTENSMKVAKDGV 118
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVV 187
++ +A+VRPPGHHA G+C NN A + A SG ++++
Sbjct: 119 ACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFSGAERILI 178
Query: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMN-HGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
+D+DVH+G+GT FY +VL S+H + HG + P P++ D +G G+G GYN N+
Sbjct: 179 VDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESD-FDHIGSGKGLGYNANLA 237
Query: 247 L-PNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGR 305
L G D Y+ + +++P +F+P+ +++ G D+ DP G CLT DGY +
Sbjct: 238 LNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILY 297
Query: 306 IVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
++SLA GR+L+V EGGY+ SA + + +L
Sbjct: 298 HLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 332
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 25/370 (6%)
Query: 35 FDTGFDPGFLEVLEKHPENSDRIKNIVSILKR-GPISPYISWHSGIPAQIPQLLSFHTPD 93
F+ G D F + HPE R + I+ L+ G + + + A ++ HT
Sbjct: 431 FNEGDDAHFDLEEDNHPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKK 490
Query: 94 YINELVEADKAGGKMVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVL--DGHGKI 144
+ L + + + + L + A AVG L ++ + D +
Sbjct: 491 MLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN 550
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGK-VVVIDIDVHYGNGTAEGFY 203
A +VRPPGHHA + + G+C NN +A + A K V+++D DVH+GNGT E FY
Sbjct: 551 ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFY 610
Query: 204 RSNKVLTISLHM-NHGSWGP-SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAM 260
+ V+ +S+H + G++ P P++ + ++GEG G G ++N+P GD Y A
Sbjct: 611 EDSNVMYMSIHRHDKGNFYPIGEPKDYS--DVGEGAGEGMSVNVPFSGVQMGDNEYQMAF 668
Query: 261 TELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLL 320
+++P +F P+++++ G D++ DP G +T + + M + SLA GGR++
Sbjct: 669 QRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLA----GGRII 724
Query: 321 IVQEGGYHVTYSAYCLHATLEGVLNLP----LALLSDPIAYYPED-EAFPVKVIESIKQY 375
V EGGY++T + A E + N L + A P+ E+ +K I +
Sbjct: 725 TVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCIKTIREVCAV 784
Query: 376 QNDVIPFLKG 385
Q LKG
Sbjct: 785 QQKYWSILKG 794
>sp|P56523|CLR3_SCHPO Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr3 PE=1 SV=1
Length = 687
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 30/346 (8%)
Query: 27 NHDTGKGLFDTG--FDPGF-----LEVLEKHPENSDRIKNIVSILKRGPISPYISWHSGI 79
+H+ + L +G +DP L ++ HPE+ R+ + +K+ + S +
Sbjct: 47 SHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDV 106
Query: 80 PAQIP-------QLLSFHTPDYINELVEADK------AGGKMVCDGTVLNPGSWGAALLA 126
+IP +LL H+ + + + +K A + + D N S A LA
Sbjct: 107 FLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKISDSLYYNNESAFCARLA 166
Query: 127 VGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS---GCG 183
G+ + V+ G K A+A+VRPPGHHA+P G+C NN + + L
Sbjct: 167 CGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIK 226
Query: 184 KVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYN 242
+V+++D D+H+GNGT FY VL +SLH +G + P G + GEG G G
Sbjct: 227 RVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPG-TNYGCAENCGEGPGLGRT 285
Query: 243 LNIPLP-NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYR 301
+NIP G GD Y++A +V+P +F+P+++++ G D++A D G+ LT Y
Sbjct: 286 VNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYA 345
Query: 302 EMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP 347
M +++ LAD G++ I EGGY++ + A + +L +P
Sbjct: 346 HMTQMLMGLAD----GKVFISLEGGYNLDSISTSALAVAQSLLGIP 387
>sp|Q941D6|HDA14_ARATH Histone deacetylase 14 OS=Arabidopsis thaliana GN=HDA14 PE=2 SV=1
Length = 423
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 23/300 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGI------PAQIPQLLSFHTPDYINELVEA 101
E HPE S R+ IV+ L+ ++P + A + + + H Y+ L +A
Sbjct: 78 ESHPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKA 137
Query: 102 -DKAG--GKMVCDG---TVLNPGSWGAALLAVGTTLSAMKHVLDGHGK-----IAYALVR 150
D+A G + +G T ++ +L+A G ++ + V+ I +AL+R
Sbjct: 138 MDEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIR 197
Query: 151 PPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
PPGHHA P G+C N +A + A + G ++ +ID DVH+GNGT + F +
Sbjct: 198 PPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIF 257
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQ 269
+S H + S+P G + ++G+G+G G LN+PLP G+GD E++VP Q
Sbjct: 258 FLSTHQDG-----SYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQ 312
Query: 270 KFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
+F+P++I++ G D+ DP T Y + + ++ LA GGR + EGGY++
Sbjct: 313 RFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNL 372
>sp|O27262|Y1194_METTH Uncharacterized protein MTH_1194 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1194 PE=3 SV=1
Length = 331
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 150/283 (53%), Gaps = 17/283 (6%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINEL-VEADKAGG 106
E H ENS R + I+ ++ +SP G+ A I +L H+ ++ L V A + GG
Sbjct: 15 EGHVENSGRTRAILRAIESSDLSPRFV-EPGM-AGIDDILMVHSSTHVEYLEVFAGRGGG 72
Query: 107 KMVCDGTVLNPGSWGAALLAVGTTLSAMKHVL-DGHGKIAYALVRPPGHHAQPTMADGYC 165
+ D T + P S+ A L+ G + A + L DG +Y+L RPPGHHA + G+C
Sbjct: 73 WLDYD-TYMTPESFSVARLSAGGAMLAAEEALRDG---WSYSLGRPPGHHATYDRSMGFC 128
Query: 166 FLNNAGLAVQLAL-NSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH 224
NN +A++ A N G + +V+D DVH+GNGT+ FYR V+ IS+H + +
Sbjct: 129 IFNNIAIAIEHARRNLGVSRPLVLDFDVHHGNGTSSIFYRDRDVMYISIHQDPRTL---F 185
Query: 225 PQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDS 284
P G +DE G GEG G+NLNIP+P G+G+R Y+ + ++ ++ F P+MI + G D+
Sbjct: 186 PGTGFIDETGSGEGEGFNLNIPMPRGSGNREYLWILGMILPAVLEGFRPDMIFVSAGFDA 245
Query: 285 SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
DP + + + +G + +G V EGGY
Sbjct: 246 HRRDPLAEIMVDEEFFSWIGWFIHQ-----TGLPCTAVLEGGY 283
>sp|Q9Z2V5|HDAC6_MOUSE Histone deacetylase 6 OS=Mus musculus GN=Hdac6 PE=1 SV=3
Length = 1149
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 34/358 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D+ M++H L+D HPE RI I+ L+ ++
Sbjct: 474 PLLQNRTGLVYDEKMMSH---CNLWDN-----------HHPETPQRILRIMCHLEEVGLA 519
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
PA +LL+ H+ +Y+ L +K + + D + P ++ A
Sbjct: 520 ARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAK 579
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA--LNSGC 182
LA G ++ VL G A+VRPPGHHA+P A G+CF N+ +A + A +
Sbjct: 580 LATGAACRLVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRA 639
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +SLH + G++ P + G ++G G G+
Sbjct: 640 LRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDE-GASSQVGRDAGIGF 698
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+P NG GD Y+ A LV+P +F P ++++ G D++ DP G +T +G
Sbjct: 699 TVNVPW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEG 757
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVLNLP---LALLSDP 354
Y + ++ LA GGR++++ EGGY++ + + A +L P L LL P
Sbjct: 758 YAHLTHLLMGLA----GGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 811
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 166/336 (49%), Gaps = 17/336 (5%)
Query: 31 GKGL-FDTGFDPGFLEVLEKHPENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLS 88
G GL FD + + PE+ +R+ I ++ G + +S+ + A+ +L+
Sbjct: 84 GTGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLILEGLLGRCVSFQARF-AEKEELML 142
Query: 89 FHTPDYIN--ELVEADKAGGKMVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHG 142
H+ +YI+ E + G V D L+P S+ A LA G+ L + ++
Sbjct: 143 VHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEI 202
Query: 143 KIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEG 201
+ A++RPPGHHAQ + DGYC N+ +A + A +V+++D DVH+G GT
Sbjct: 203 RNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFI 262
Query: 202 FYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPL-PNGTGDRGYVHA 259
F + VL S+H HG + P H + +G G+G GY +N+P G D Y+ A
Sbjct: 263 FDQDPSVLYFSIHRYEHGRFWP-HLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAA 321
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL 319
+++P +F+P ++++ G D+ DP G T G+ + ++ LA GG+L
Sbjct: 322 FLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLA----GGKL 377
Query: 320 LIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI 355
++ EGGY++ A + A+L +L P +L +
Sbjct: 378 ILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCV 413
>sp|Q969S8|HDA10_HUMAN Histone deacetylase 10 OS=Homo sapiens GN=HDAC10 PE=1 SV=1
Length = 669
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 14/314 (4%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV-- 109
E +R+ + L++ + S A +L H+P+Y++ + E G + +
Sbjct: 26 ERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQA 85
Query: 110 ----CDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
D +P ++ A LA G L + VL G + ALVRPPGHH Q A+G+C
Sbjct: 86 LSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFC 145
Query: 166 FLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPS 223
NN +A A G +++V+D DVH+G G F VL S H HG + P
Sbjct: 146 VFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWP- 204
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQ 282
+ D +G G+G G+ +N+P G G+ YV A L++P +F+P ++++ G
Sbjct: 205 FLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGF 264
Query: 283 DSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEG 342
DS+ DP G+ T + + + ++++ LA GGR+ V EGGYH+ A + T++
Sbjct: 265 DSAIGDPEGQMQATPECFAHLTQLLQVLA----GGRVCAVLEGGYHLESLAESVCMTVQT 320
Query: 343 VLNLPLALLSDPIA 356
+L P LS P+A
Sbjct: 321 LLGDPAPPLSGPMA 334
>sp|Q9UBN7|HDAC6_HUMAN Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=1 SV=2
Length = 1215
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 168/335 (50%), Gaps = 16/335 (4%)
Query: 51 PENSDRIKNIV-SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYIN--ELVEADKAGGK 107
PE +R+ I +++ G + +S+ + A+ +L+ H+ +YI+ E + G
Sbjct: 106 PEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGEL 164
Query: 108 MVC----DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
V D L+P S+ A LA G+ L + VL + A++RPPGHHAQ ++ DG
Sbjct: 165 RVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDG 224
Query: 164 YCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
YC N+ +A + A +V+++D DVH+G GT F + VL S+H G +
Sbjct: 225 YCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFW 284
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVV 280
P H + G G+G GY +N+P G D Y+ A +++P +F+P ++++
Sbjct: 285 P-HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAA 343
Query: 281 GQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATL 340
G D+ DP G T G+ ++ ++ LA GG+L++ EGGY++ A + A+L
Sbjct: 344 GFDALQGDPKGEMAATPAGFAQLTHLLMGLA----GGKLILSLEGGYNLRALAEGVSASL 399
Query: 341 EGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQY 375
+L P +L P A +A +E+++ +
Sbjct: 400 HTLLGDPCPMLESPGAPCRSAQASVSCALEALEPF 434
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 31/331 (9%)
Query: 11 PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPIS 70
P + + +D M+NH L+D+ HPE RI I+ L+ ++
Sbjct: 475 PVLQSRTGLVYDQNMMNH---CNLWDS-----------HHPEVPQRILRIMCRLEELGLA 520
Query: 71 PYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMV------CDGTVLNPGSWGAAL 124
+ PA +LL+ H+ +Y+ L +K + + D + P ++ A
Sbjct: 521 GRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQ 580
Query: 125 LAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLA--LNSGC 182
LA G ++ VL G A+VRPPGHHA+ A G+CF N+ +A + A ++
Sbjct: 581 LATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHA 640
Query: 183 GKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGY 241
+++++D DVH+GNGT F VL +SLH +HG++ P + G ++G G G+
Sbjct: 641 LRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDE-GASSQIGRAAGTGF 699
Query: 242 NLNIPLPNG--TGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDG 299
+N+ NG GD Y+ A LV+P +F P ++++ G D++ DP G ++ +G
Sbjct: 700 TVNVAW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEG 758
Query: 300 YREMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
Y + ++ LA GR++++ EGGY++T
Sbjct: 759 YAHLTHLLMGLAS----GRIILILEGGYNLT 785
>sp|Q8GXJ1|HDA15_ARATH Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=2
Length = 552
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 151/301 (50%), Gaps = 14/301 (4%)
Query: 37 TGFDPGFL-----EV-LEKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSF- 89
GFD L EV + HPE DR++ I + L + P Q L
Sbjct: 152 VGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMV 211
Query: 90 HTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALV 149
HT ++++ + + T N S AA LA G + G K +ALV
Sbjct: 212 HTSEHVDAVDTTSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALV 271
Query: 150 RPPGHHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVL 209
RPPGHHA A G+C NNA +A +A +G KV+++D DVH+GNGT E F ++ VL
Sbjct: 272 RPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVL 331
Query: 210 TISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP-NGTGDRGYVHAMTELVVPAI 268
ISLH + G G +P G DE+G G GY +N+P G GD+ Y+ A +V+P
Sbjct: 332 YISLHRHEG--GNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIA 389
Query: 269 QKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYH 328
F P+ +++ G D++ DP G +T GY M +++ L GG++L++ EGGY+
Sbjct: 390 SAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLC----GGKMLVILEGGYN 445
Query: 329 V 329
+
Sbjct: 446 L 446
>sp|Q6P3E7|HDA10_MOUSE Histone deacetylase 10 OS=Mus musculus GN=Hdac10 PE=2 SV=2
Length = 666
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 163/345 (47%), Gaps = 23/345 (6%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGK 107
E E +R+ + L++ + S A +L H+P+YI LV+ + K
Sbjct: 22 ECEIECPERLTAALDGLRQRGLEERCLCLSACEASEEELGLVHSPEYIA-LVQKTQTLDK 80
Query: 108 MVC-------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ +P ++ A LA G L + VL G ALVRPPGHH+Q
Sbjct: 81 EELHALSKQYNAVYFHPDTFHCARLAAGAALQLVDAVLTGAVHNGLALVRPPGHHSQRAA 140
Query: 161 ADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
A+G+C NN LA + A G +++++D DVH+G G F VL S H HG
Sbjct: 141 ANGFCVFNNVALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHG 200
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIV 277
S+ P P++ D +G+G+G G+ +N+P G G+ Y+ A +++P +F+P +++
Sbjct: 201 SFWPFLPESDA-DAVGQGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVL 259
Query: 278 LVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLH 337
+ G DS+ DP G+ T + + + ++++ LA GGR+ V EGGYH L
Sbjct: 260 VSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLA----GGRICAVLEGGYH-------LE 308
Query: 338 ATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIPF 382
+ + V + LL DP +ESI+ Q P+
Sbjct: 309 SLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQSVQTAQTPY 353
>sp|Q48935|APHA_MYCRA Acetylpolyamine aminohydrolase OS=Mycoplana ramosa GN=aphA PE=1
SV=1
Length = 341
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 9/231 (3%)
Query: 113 TVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGL 172
T ++PG+W AAL ++ + + + GH K A++L RPPGHHA M GYCF+NNA +
Sbjct: 118 TAISPGTWEAALSSMASAIDGADLIAAGH-KAAFSLCRPPGHHAGIDMFGGYCFINNAAV 176
Query: 173 AVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDE 232
A Q L+ G K+ ++D+D H+GNGT + FY V SLH + P G +E
Sbjct: 177 AAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFL--GYAEE 234
Query: 233 LGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGR 292
G+G G G N P+ GT + A+T+ + I F IV+ +G D+ DP
Sbjct: 235 TGKGAGAGTTANYPMGRGTPYSVWGEALTD-SLKRIAAFGAEAIVVSLGVDTFEQDPISF 293
Query: 293 QCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSAYCLHATLEGV 343
LT Y MGR + + SG LL+V EGGY V + L+GV
Sbjct: 294 FKLTSPDYITMGRTIAA-----SGVPLLVVMEGGYGVPEIGLNVANVLKGV 339
>sp|P72702|Y245_SYNY3 Uncharacterized protein slr0245 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0245 PE=3 SV=1
Length = 304
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 154/333 (46%), Gaps = 34/333 (10%)
Query: 16 IINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSILKRGPISPYISW 75
++ + + L H+TG HPE R+ I + L++ P + Y+ W
Sbjct: 1 MVAIIYSAEFLRHETGP----------------THPECPARLTAIATALRKMPGANYLHW 44
Query: 76 HSGIPAQI---PQLLSFHTPDYINELVEADKAGGKMVCDGTVLNPGSWGAALLAVGTTLS 132
P P +L H+ +Y+N+L + + GG + T ++P S+ A LAV L
Sbjct: 45 QKPSPVTWNLDPYILRCHSQEYLNKLAKLAELGGGSLDADTPVSPQSYDVARLAVRAWLD 104
Query: 133 AMKHVLDGHGKIAYALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDID 191
+ HVL+ + + L RPPGHHA G+C LNN +A AL G +V ++D D
Sbjct: 105 GVDHVLNQREAV-FVLARPPGHHAIRNTGMGFCLLNNVAIAAHYALTRPGVERVAILDWD 163
Query: 192 VHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT 251
VH+GNGT + ++ SLH P +P G + G+ + LNIPL G
Sbjct: 164 VHHGNGTEALVDHNPRIFYCSLHQ-----FPCYPGTGAAGDRGQHDNV---LNIPLKPGG 215
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
+ Y A V+P +++ +P+++++ G D++ DP L + Y M + ++
Sbjct: 216 DGKVYREAFEHKVLPFLRQVKPDLLLVSAGYDANHSDPLAYMNLIPEDYGMMTHYLMEIS 275
Query: 312 DRYSGGRLLIVQEGGYHVTYSAYCLHATLEGVL 344
G EGGYH+ A + TL+ +L
Sbjct: 276 PYPVLG-----LEGGYHLPSLAKSVVETLKPLL 303
>sp|Q8WUI4|HDAC7_HUMAN Histone deacetylase 7 OS=Homo sapiens GN=HDAC7 PE=1 SV=2
Length = 952
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 172/374 (45%), Gaps = 57/374 (15%)
Query: 4 SPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSI 63
S SE P+ + +D ML H G D +HPE++ RI++I S
Sbjct: 507 SSSETPARTLPFTTGLIYDSVMLKHQCSCG--DNS----------RHPEHAGRIQSIWSR 554
Query: 64 LKRGPISPYISWHSGIPAQIPQLLSFHTPDYI-----NELVEADKAGGKMV--------- 109
L+ + G A + +L S H+ ++ N L GK+
Sbjct: 555 LQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFV 614
Query: 110 ---CDG------TVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT 159
C G T+ N S AA A G+ V K +A+VRPPGHHA +
Sbjct: 615 MLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHS 674
Query: 160 MADGYCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
A G+CF N+ +A QL S K++++D DVH+GNGT + FY+ VL ISLH +
Sbjct: 675 TAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDD 734
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG----TGDRGYVHAMTELVVPAIQKFEPN 274
G P +G VDE+G G G G+N+N+ G GD Y+ A +V+P ++F P+
Sbjct: 735 --GNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPD 792
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYSGGRLLIVQEGGYHVT 330
++++ G D++ P + GY + G + + L + +GG +++ EGG+ +T
Sbjct: 793 LVLVSAGFDAAEGHPA-----PLGGYHVSAKCFGYMTQQLMN-LAGGAVVLALEGGHDLT 846
Query: 331 ----YSAYCLHATL 340
S C+ A L
Sbjct: 847 AICDASEACVAALL 860
>sp|Q9UKV0|HDAC9_HUMAN Histone deacetylase 9 OS=Homo sapiens GN=HDAC9 PE=1 SV=2
Length = 1011
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 21/258 (8%)
Query: 105 GGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T+ N S GAA +AVG + V G K +A+VRPPGHHA+ + A G
Sbjct: 732 GGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMG 791
Query: 164 YCFLNNAGLAVQ-LALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWG 221
+CF N+ + + L K++++D+DVH+GNGT + FY +L ISLH + G++
Sbjct: 792 FCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFF 851
Query: 222 PSHPQNGTVDELGEGEGFGYNLNIPLPNG----TGDRGYVHAMTELVVPAIQKFEPNMIV 277
P +G +E+G G G GYN+NI G GD Y+ A +V P ++F+P+M++
Sbjct: 852 PG---SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVL 908
Query: 278 LVVGQDS--SAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVT----Y 331
+ G D+ P G +T + + + + +LAD GR+++ EGG+ +T
Sbjct: 909 VSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLAD----GRVVLALEGGHDLTAICDA 964
Query: 332 SAYCLHATLEGVLNLPLA 349
S C++A L L PLA
Sbjct: 965 SEACVNALLGNELE-PLA 981
>sp|Q57955|Y535_METJA Uncharacterized protein MJ0535 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0535 PE=3 SV=1
Length = 343
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 33/291 (11%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKA----- 104
H EN +R+ I++ LK + + I ++L H+ DY+ ++ K+
Sbjct: 23 HVENPERVLTILNSLKSNGFDDIVLIEG--KSTINEILEIHSRDYVYSIINLSKSFNYYD 80
Query: 105 GGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPT----- 159
G +CD T+ AAL A A+K L + +AL RPPGHHA +
Sbjct: 81 GDTYLCDRTL------DAALTAFKLAKEAVKLALKDR-DLYFALTRPPGHHAGISGRALG 133
Query: 160 -MADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHG 218
M++G+C NN A +LA N KV++ID DVH+GNGT E F+ N+V+ I H
Sbjct: 134 AMSNGFCIFNNIAGAARLAKNY-MKKVIIIDFDVHHGNGTQEIFWNDNRVIHIDFHQR-- 190
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVL 278
+P G + ++G E G +N+P P + D Y+ A E+V P + F P+ +++
Sbjct: 191 ---GIYPGTGDILDIGGEEAKGTKINLPFPAHSTDADYIFAWNEIVEPILNYFSPDTVLV 247
Query: 279 VVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
G D+ D LT YR +G + SG + V EGGY +
Sbjct: 248 SAGFDAFINDGLASMDLTETFYRFVGA-------KLSGYSVTAVLEGGYSI 291
>sp|P83038|HDAC4_CHICK Histone deacetylase 4 OS=Gallus gallus GN=HDAC4 PE=2 SV=1
Length = 1080
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 180/387 (46%), Gaps = 58/387 (14%)
Query: 4 SPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSI 63
S EPP+ + +D ML H G ++ HPE++ RI++I S
Sbjct: 638 SVQEPPT-KPRFTTGLVYDTLMLKHQCTCGNTNS------------HPEHAGRIQSIWSR 684
Query: 64 LKRGPISPYISWHSGIPAQIPQLLSFHTPDYI---------NELVEADKAGG-------K 107
L+ + G A + +L + H+ + + +++ K G +
Sbjct: 685 LQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLTSMFVR 744
Query: 108 MVCDG------TVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ C G T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ +
Sbjct: 745 LPCGGVGVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEEST 804
Query: 161 ADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
G+C+ N+ +A +L K++++D DVH+GNGT + FY VL ISLH + G
Sbjct: 805 PMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDG 864
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG----TGDRGYVHAMTELVVPAIQKFEPN 274
++ P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+
Sbjct: 865 NFFPG---SGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPD 921
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR---YSGGRLLIVQEGGYHVT- 330
++++ SS FD + GY + L + +GGR+++ EGG+ +T
Sbjct: 922 VVLV-----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTA 976
Query: 331 ---YSAYCLHATLEGVLN-LPLALLSD 353
S C+ A L L+ LP +L
Sbjct: 977 ICDASEACVSALLGNELDPLPEKVLQQ 1003
>sp|Q80ZH1|HDAC5_CRIGR Histone deacetylase 5 OS=Cricetulus griseus GN=HDAC5 PE=2 SV=1
Length = 1111
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 42/371 (11%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI---------NELVE 100
HPE++ RI++I S L+ + G A + ++ + H+ + + ++
Sbjct: 693 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLD 752
Query: 101 ADK--------------AGGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIA 145
+ K GG V TV N S A +AVG + V G K
Sbjct: 753 SKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNG 812
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYR 204
+A++RPPGHHA+ + A G+CF N+ + +L GKV+++D D+H+GNGT + FY
Sbjct: 813 FAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYD 872
Query: 205 SNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHA 259
VL ISLH ++G++ P +G +E+G G G GYN+N+ G GD Y+ A
Sbjct: 873 DPSVLYISLHRYDNGNFFPG---SGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTA 929
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSA--FDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+V+P +F P+++++ G D+ P G +T + + R + +LA GG
Sbjct: 930 FRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLA----GG 985
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI-AYYPEDEAFPV--KVIESIKQ 374
R+++ EGG+ +T A + +L++ L L + + P A KVIE +
Sbjct: 986 RVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIEIQSK 1045
Query: 375 YQNDVIPFLKG 385
+ + V F G
Sbjct: 1046 HWSCVQRFATG 1056
>sp|Q3JUN4|APHA_BURP1 Acetylpolyamine aminohydrolase OS=Burkholderia pseudomallei (strain
1710b) GN=aphA PE=1 SV=1
Length = 341
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 129/228 (56%), Gaps = 15/228 (6%)
Query: 105 GGKMVCDGTV-LNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
+ + DG+ + +W AA + + L+A V DG AYAL RPPGHHA+ A G
Sbjct: 107 AARHLADGSCPVGEHTWRAAYWSAQSALAAAAAVRDG-APAAYALCRPPGHHARVDAAGG 165
Query: 164 YCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPS 223
+C+LNNA +A Q +V V+D D+H+G G E FY VL +S+H + ++ P+
Sbjct: 166 FCYLNNAAIAAQALRARHA-RVAVLDTDMHHGQGIQEIFYARRDVLYVSIHGDPTNFYPA 224
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQD 283
G DE G GEG GYN+N+P+P+G+ + + + + + +++F P+ +VL +G D
Sbjct: 225 --VAGFDDERGAGEGLGYNVNLPMPHGSSEAAFFERVDD-ALRELRRFAPDALVLSLGFD 281
Query: 284 SSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRL--LIVQEGGYHV 329
DP + +T DG+ +G ++ +L RL +IVQEGGYH+
Sbjct: 282 VYRDDPQSQVAVTTDGFGRLGHLIGAL-------RLPTVIVQEGGYHI 322
>sp|P56524|HDAC4_HUMAN Histone deacetylase 4 OS=Homo sapiens GN=HDAC4 PE=1 SV=3
Length = 1084
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 58/387 (14%)
Query: 4 SPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSI 63
S EPP+ + +D ML H G + HPE++ RI++I S
Sbjct: 642 SVQEPPT-KPRFTTGLVYDTLMLKHQCTCGSSSS------------HPEHAGRIQSIWSR 688
Query: 64 LKRGPISPYISWHSGIPAQIPQLLSFHTPDYI---------NELVEADKAGG-------K 107
L+ + G A + +L + H+ + + +++ K G +
Sbjct: 689 LQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLASVFVR 748
Query: 108 MVCDG------TVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTM 160
+ C G T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ +
Sbjct: 749 LPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEEST 808
Query: 161 ADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHG 218
G+C+ N+ +A +L K++++D DVH+GNGT + FY VL +SLH + G
Sbjct: 809 PMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDG 868
Query: 219 SWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG----TGDRGYVHAMTELVVPAIQKFEPN 274
++ P +G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+
Sbjct: 869 NFFPG---SGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPD 925
Query: 275 MIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR---YSGGRLLIVQEGGYHVT- 330
++++ SS FD + GY R L + +GGR+++ EGG+ +T
Sbjct: 926 VVLV-----SSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTA 980
Query: 331 ---YSAYCLHATLEGVLN-LPLALLSD 353
S C+ A L L+ LP +L
Sbjct: 981 ICDASEACVSALLGNELDPLPEKVLQQ 1007
>sp|Q6NZM9|HDAC4_MOUSE Histone deacetylase 4 OS=Mus musculus GN=Hdac4 PE=1 SV=1
Length = 1076
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 169/368 (45%), Gaps = 52/368 (14%)
Query: 4 SPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSI 63
S EPP+ + +D ML H G ++ HPE++ RI++I S
Sbjct: 639 SVQEPPT-KPRFTTGLVYDTLMLKHQCTCGNTNS------------HPEHAGRIQSIWSR 685
Query: 64 LKRGPISPYISWHSGIPAQIPQLLSFHTPDY-----------------INELVEADKAGG 106
L+ + G A + +L + H+ + + + GG
Sbjct: 686 LQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGG 745
Query: 107 KMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G+C
Sbjct: 746 VGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFC 805
Query: 166 FLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPS 223
+ N+ +A +L K++++D DVH+GNGT + FY VL +SLH + G++ P
Sbjct: 806 YFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPG 865
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNG----TGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
+G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 866 ---SGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLV- 921
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR---YSGGRLLIVQEGGYHVT----YS 332
SS FD + GY + L + +GGRL++ EGG+ +T S
Sbjct: 922 ----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDAS 977
Query: 333 AYCLHATL 340
C+ A L
Sbjct: 978 EACVSALL 985
>sp|Q8C2B3|HDAC7_MOUSE Histone deacetylase 7 OS=Mus musculus GN=Hdac7 PE=1 SV=2
Length = 938
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 159/329 (48%), Gaps = 45/329 (13%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI-----NELVEADK 103
KHPE++ RI++I S L+ + G A + +L S H+ ++ N L
Sbjct: 527 KHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKL 586
Query: 104 AGGKMV------------CDG------TVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKI 144
GK+ C G T+ N S AA A G+ V K
Sbjct: 587 DNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKN 646
Query: 145 AYALVRPPGHHAQPTMADGYCFLNNAGLAV-QLALNSGCGKVVVIDIDVHYGNGTAEGFY 203
+A+VRPPGHHA + A G+CF N+ +A QL + K++++D DVH+GNGT + FY
Sbjct: 647 GFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFY 706
Query: 204 RSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNG----TGDRGYVHA 259
+ VL ISLH + G P +G VDE+G G G G+N+N+ G GD Y+ A
Sbjct: 707 QDPSVLYISLHRHDD--GNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAA 764
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGY----REMGRIVRSLADRYS 315
+V+P ++F P+++++ G D++ P + GY + G + + L + +
Sbjct: 765 FRIVVMPIAREFAPDLVLVSAGFDAAEGHPA-----PLGGYHVSAKCFGYMTQQLMN-LA 818
Query: 316 GGRLLIVQEGGYHVT----YSAYCLHATL 340
GG +++ EGG+ +T S C+ A L
Sbjct: 819 GGAVVLALEGGHDLTAICDASEACVAALL 847
>sp|Q99P99|HDAC4_RAT Histone deacetylase 4 OS=Rattus norvegicus GN=Hdac4 PE=1 SV=2
Length = 1077
Score = 124 bits (312), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 169/368 (45%), Gaps = 52/368 (14%)
Query: 4 SPSEPPSPAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNIVSI 63
S EPP+ + +D ML H G ++ HPE++ RI++I S
Sbjct: 640 SVQEPPT-KPRFTTGLVYDTLMLKHQCTCGNTNS------------HPEHAGRIQSIWSR 686
Query: 64 LKRGPISPYISWHSGIPAQIPQLLSFHTPDY-----------------INELVEADKAGG 106
L+ + G A + +L + H+ + + + GG
Sbjct: 687 LQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGG 746
Query: 107 KMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGYC 165
V T+ N S GAA LAVG + + V G K +A+VRPPGHHA+ + G+C
Sbjct: 747 VGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFC 806
Query: 166 FLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGPS 223
+ N+ +A +L K++++D DVH+GNGT + FY VL +SLH + G++ P
Sbjct: 807 YFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPG 866
Query: 224 HPQNGTVDELGEGEGFGYNLNIPLPNG----TGDRGYVHAMTELVVPAIQKFEPNMIVLV 279
+G DE+G G G G+N+N+ G GD Y+ A +V+P +F P+++++
Sbjct: 867 ---SGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLV- 922
Query: 280 VGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADR---YSGGRLLIVQEGGYHVT----YS 332
SS FD + GY + L + +GGR+++ EGG+ +T S
Sbjct: 923 ----SSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDAS 978
Query: 333 AYCLHATL 340
C+ A L
Sbjct: 979 EACVSALL 986
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 152/323 (47%), Gaps = 25/323 (7%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVE------- 100
+KHP RI ++ + +S S A ++ FH DY++ L
Sbjct: 43 DKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEFHREDYLDFLKRVTPDNAE 102
Query: 101 --ADKAGGKMVCDGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG--HHA 156
ADK + D + G++ + + G +L A + ++ G IA + G HHA
Sbjct: 103 QFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIA---INWSGGLHHA 159
Query: 157 QPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
+ A G+C++N+ LA+ L + +V+ IDID+H+G+G + FY S++VLT+S H
Sbjct: 160 KRGEASGFCYVNDIVLAI-LNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKY 218
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
+G + P+ G DE G G + LN+PL +G GD Y ++ P I F+P+ I
Sbjct: 219 NGDFFPA---TGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAI 275
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV--TYSAY 334
VL G DS +D G L++ + E R RS +L+V GGY + A+
Sbjct: 276 VLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSF-----NIPMLVVGGGGYTLRNVARAW 330
Query: 335 CLHATLEGVLNLPLALLSDPIAY 357
C ++ +P L + + Y
Sbjct: 331 CYETSICVNEQIPSELPRETLYY 353
>sp|Q613L4|HDA4_CAEBR Histone deacetylase 4 OS=Caenorhabditis briggsae GN=hda-4 PE=3 SV=1
Length = 892
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 138/308 (44%), Gaps = 36/308 (11%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKA----- 104
H EN +RI+ I S L + A + QL H+ Y + A
Sbjct: 503 HVENGERIQRIWSKLTEEGHVAKCERITAKKASLEQLQMVHSQTYTTFFAVSPTACLKID 562
Query: 105 --------------GGKMVCDGTVLNPGSWG-AALLAVGTTLSAMKHVLDGHGKIAYALV 149
GG + T N S AA LA GT + V +G K +A +
Sbjct: 563 ANALPLKRFLQLPCGGIGIDSDTYFNDASTQIAARLAAGTLIELSSQVAEGRLKNGFACI 622
Query: 150 RPPGHHAQPTMADGYCFLNNAGLA---VQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSN 206
RPPGHHA+ A G+CF NN + +Q C K+ +ID DVH+GNGT F
Sbjct: 623 RPPGHHAEAEQALGFCFFNNVAVTAKVLQAKYPVQCAKIAIIDWDVHHGNGTQLSFDDDP 682
Query: 207 KVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT-GDRGYVHAMTELVV 265
VL +SLH + G P G+V E+G+G G G+++NIP G D Y+ A +V
Sbjct: 683 NVLYMSLHRHDN--GNFFPGTGSVTEIGKGAGKGFSVNIPFSGGVMKDAEYLAAWRTVVE 740
Query: 266 PAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYR---EM-GRIVRSLADRYSGGRLLI 321
P + F P+ I++ G FD + GY EM G + + L Y+ G++++
Sbjct: 741 PVLASFCPDFILVSAG-----FDACHGHVNALGGYEITPEMFGYMTKCLLS-YANGKVVL 794
Query: 322 VQEGGYHV 329
EGGY++
Sbjct: 795 ALEGGYNL 802
>sp|O17323|HDA4_CAEEL Histone deacetylase 4 OS=Caenorhabditis elegans GN=hda-4 PE=1 SV=3
Length = 869
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 105 GGKMVCDGTVLNPGS-WGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADG 163
GG V T N S AA LA GT + V +G K +A +RPPGHHA+ A G
Sbjct: 557 GGIGVDSDTYFNDASTQTAARLAAGTLIELSSQVAEGRLKNGFACIRPPGHHAEHEQAMG 616
Query: 164 YCFLNNAGLAV---QLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSW 220
+CF NN +AV Q + C K+ +ID DVH+GNGT F VL +SLH +
Sbjct: 617 FCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLYMSLHRH--DK 674
Query: 221 GPSHPQNGTVDELGEGEGFGYNLNIPLPNGT-GDRGYVHAMTELVVPAIQKFEPNMIVLV 279
G P G+V E+G+ + G +N+P D Y+ A ++ P + F P+ I++
Sbjct: 675 GNFFPGTGSVTEVGKNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFIIVS 734
Query: 280 VGQDSSAFDPNGRQCLTMDGYR---EM-GRIVRSLADRYSGGRLLIVQEGGY 327
G D+ PN + GY EM G + +SL + Y+ G++++ EGGY
Sbjct: 735 AGFDACHGHPNA-----LGGYEVTPEMFGYMTKSLLN-YASGKVVLALEGGY 780
>sp|Q54VQ7|HDA22_DICDI Type-2 histone deacetylase 2 OS=Dictyostelium discoideum GN=hdaC PE=2
SV=1
Length = 1704
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 42/336 (12%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIP-AQIPQLLSFHTPDYINEL---------- 98
H E DRI+ VS + +P + P + +++ H +YI +L
Sbjct: 1080 HLEKPDRIQVAVSCINEFASNPLVDIFDNPPEVDMRYVMAVHDANYIKKLETSLPPENSE 1139
Query: 99 ----VEADKAGGKMVCDG-------------TVLNPGSWGAALLAVGTTLSAMKHVLDGH 141
+E+DK+G + T ++ S AAL A G+ +A+ V
Sbjct: 1140 FETHLESDKSGAMVTVASHKDFEGDDDNIYDTFVSHRSIKAALRASGSVCAAVDSVSRSG 1199
Query: 142 GKIAYALVRPPGHHA------QPTMADGYCFLNNAGLAVQLA-LNSGCGKVVVIDIDVHY 194
A+ +RPPGHHA + GYC +NN + + A L +G ++ V+D DVH+
Sbjct: 1200 YTRAFCAIRPPGHHAGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIAVVDFDVHH 1259
Query: 195 GNGTAEGFYRSNKVLTISLHM--NHGSWGPSHPQN-GTVDELGEGEGFGYNLNIPLPNGT 251
GNGT E + L IS+H+ + P Q+ G +DE+ G+ G LNI L T
Sbjct: 1260 GNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGDIDEVS-GQFDGNILNIGLKRNT 1318
Query: 252 GDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLA 311
G ++ ++P ++ ++P +I L G D DP L + Y + ++++++A
Sbjct: 1319 GSAVFLQQWMNKIIPRLEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFVITKMIKTVA 1378
Query: 312 DRYSGGRLLIVQEGGYHVTYS---AYCLHATLEGVL 344
+Y GR++ V EGGY + + C+++ L+ ++
Sbjct: 1379 FKYCKGRIISVLEGGYGIEKTNSLQRCVNSHLKALI 1414
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 138/294 (46%), Gaps = 20/294 (6%)
Query: 48 EKHPENSDRIKNIVSILKRGPISPYISWHSGIP--AQIPQLLSFHTPDYINELVEADKAG 105
++HP N R+ +LK I+ + P A +L HT DYI + A
Sbjct: 19 QEHPFNQQRVLLTYDLLKT--INAFDDGDIVTPRLASEEELSLVHTDDYIQAVKLA--GA 74
Query: 106 GKMVCD-------GTVLNP---GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHH 155
GK+ + GT P G AA L VG TL+A V+ G A A + HH
Sbjct: 75 GKLPAEEGESYGLGTEDTPVFAGMHEAASLLVGGTLTAADWVMSGQALHA-ANLGGGLHH 133
Query: 156 AQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM 215
A G+C N++ +A+Q +V+ ID D H+G+G FY + V T+S+H
Sbjct: 134 GFRGRASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDNPDVCTLSIHE 193
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNM 275
G + P G + E G G+G+GY+ NIPL T D ++ A FEP++
Sbjct: 194 T-GRY--LFPGTGQIQEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASEVAAYFEPDV 250
Query: 276 IVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
I+ G D+ +DP T++ Y E+ R+ +LA +Y GG+ + V GGY +
Sbjct: 251 IISQNGADAHYYDPLTHLSATINIYEEIPRLAHTLAHQYCGGKWIAVGGGGYDI 304
>sp|Q9Z2V6|HDAC5_MOUSE Histone deacetylase 5 OS=Mus musculus GN=Hdac5 PE=1 SV=2
Length = 1113
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 195/419 (46%), Gaps = 54/419 (12%)
Query: 10 SPAAEGIINVFWDDGMLNHDTGKGLFDTG--FDPGFLE------VLEKHPENSDRIKNIV 61
SPAA G + D + K LF TG +D L+ HPE++ RI++I
Sbjct: 651 SPAAPGSMKSPTDQPTVV----KHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIW 706
Query: 62 SILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI---------NELVEADK--------- 103
S L+ + G A + ++ + H+ + + +++ K
Sbjct: 707 SRLQETGLLGKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKM 766
Query: 104 -----AGGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQ 157
GG V TV N S A +AVG + V G K +A++RPPGHHA+
Sbjct: 767 YAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAE 826
Query: 158 PTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM- 215
+ A G+CF N+ + +L GKV+++D D+H+GNGT + FY VL ISLH
Sbjct: 827 ESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRY 886
Query: 216 NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHAMTELVVPAIQKF 271
++G++ P +G +E+G G G GYN+N+ G GD Y+ A +V+P Q+F
Sbjct: 887 DNGNFFPG---SGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEF 943
Query: 272 EPNMIVLVVGQDSSA--FDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
P+++++ G D+ P G +T + + R + +LA GGR+++ EGG+ +
Sbjct: 944 SPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLA----GGRVVLALEGGHDL 999
Query: 330 TYSAYCLHATLEGVLNLPLALLSDPI-AYYPEDEAFPV--KVIESIKQYQNDVIPFLKG 385
T A + +L++ L L + + P A KVIE ++ + V F G
Sbjct: 1000 TAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAG 1058
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 24/291 (8%)
Query: 49 KHPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM 108
KHP R+ ++ + + + A +LL FH+ DY+N L +
Sbjct: 44 KHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENANK 103
Query: 109 VCDGTVLN----------PGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG--HHA 156
+ GT+ N + L G +L A + +++ IA + G HHA
Sbjct: 104 LPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIA---INWSGGLHHA 160
Query: 157 QPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMN 216
+ G+C++N+ L++ L L +++ IDID+H+G+G E FY +++V T+S H
Sbjct: 161 KKNSPSGFCYVNDIVLSI-LNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKY 219
Query: 217 HGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMI 276
+G + P G + E+G +G + LN+PL +G D Y++ +V P I F+P +I
Sbjct: 220 NGEFFPG---TGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLI 276
Query: 277 VLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
V G DS D G L + + E + V+S G +L+V GGY
Sbjct: 277 VQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSF-----GLPMLVVGGGGY 322
>sp|Q9UQL6|HDAC5_HUMAN Histone deacetylase 5 OS=Homo sapiens GN=HDAC5 PE=1 SV=2
Length = 1122
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 177/371 (47%), Gaps = 42/371 (11%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI---------NELVE 100
HPE++ RI++I S L+ + G A + ++ + H+ + + ++
Sbjct: 704 HPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLD 763
Query: 101 ADK--------------AGGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIA 145
+ K GG V TV N S A +AVG L V G K
Sbjct: 764 SKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVAAGELKNG 823
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYR 204
+A++RPPGHHA+ + A G+CF N+ + +L GKV+++D D+H+GNGT + FY
Sbjct: 824 FAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYN 883
Query: 205 SNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHA 259
VL ISLH ++G++ P +G +E+G G G GYN+N+ G GD Y+ A
Sbjct: 884 DPSVLYISLHRYDNGNFFPG---SGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTA 940
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSA--FDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+V+P +F P+++++ G D+ P G +T + + R + +LA GG
Sbjct: 941 FRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLA----GG 996
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI-AYYPEDEAFPV--KVIESIKQ 374
R+++ EGG+ +T A + +L++ L L + + P A KVIE +
Sbjct: 997 RVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSK 1056
Query: 375 YQNDVIPFLKG 385
+ + V F G
Sbjct: 1057 HWSCVQKFAAG 1067
>sp|Q5R902|HDAC5_PONAB Histone deacetylase 5 OS=Pongo abelii GN=HDAC5 PE=2 SV=1
Length = 1122
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 176/371 (47%), Gaps = 42/371 (11%)
Query: 50 HPENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYI---------NELVE 100
HPE++ RI++ S L+ + G A + ++ + H+ + + V+
Sbjct: 704 HPEHAGRIQSTWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKVD 763
Query: 101 ADK--------------AGGKMVCDGTVLNP-GSWGAALLAVGTTLSAMKHVLDGHGKIA 145
+ K GG V TV N S A +AVG L V G K
Sbjct: 764 SKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVAAGELKNG 823
Query: 146 YALVRPPGHHAQPTMADGYCFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYR 204
+A++RPPGHHA+ + A G+CF N+ + +L GKV+++D D+H+GNGT + FY
Sbjct: 824 FAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYN 883
Query: 205 SNKVLTISLHM-NHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGT----GDRGYVHA 259
VL ISLH ++G++ P +G +E+G G G GYN+N+ G GD Y+ A
Sbjct: 884 DPSVLYISLHRYDNGNFFPG---SGAPEEVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTA 940
Query: 260 MTELVVPAIQKFEPNMIVLVVGQDSSA--FDPNGRQCLTMDGYREMGRIVRSLADRYSGG 317
+V+P +F P+++++ G D+ P G +T + + R + +LA GG
Sbjct: 941 FRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLA----GG 996
Query: 318 RLLIVQEGGYHVTYSAYCLHATLEGVLNLPLALLSDPI-AYYPEDEAFPV--KVIESIKQ 374
R+++ EGG+ +T A + +L++ L L + + P A KVIE +
Sbjct: 997 RVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSK 1056
Query: 375 YQNDVIPFLKG 385
+ + V F G
Sbjct: 1057 HWSCVQKFAAG 1067
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 130/269 (48%), Gaps = 20/269 (7%)
Query: 76 HSGIPAQIPQLLSFHTPDYINELV--------EADKAGGKMVCDGTVLNPGSWGAALLAV 127
+ PA +L FH+ DY++ L E + + + PG + +
Sbjct: 58 YKARPADAEDMLKFHSEDYVDFLERVTPENINEWKDVKRFHIGEDCPVFPGLYDYCSIYS 117
Query: 128 GTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVV 186
G ++ + H A+ G HHA+ A G+C++N+ LA+ L L +V+
Sbjct: 118 GGSIEGALKL--NHRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAI-LELLKFHARVL 174
Query: 187 VIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIP 246
IDIDVH+G+G E FY +++V+T+S H G + P G +DE+G G Y++N+P
Sbjct: 175 YIDIDVHHGDGVQEAFYLTDRVMTVSFHKFGGDFFPG---TGDIDEIGAKTGKLYSVNVP 231
Query: 247 LPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRI 306
L +G D+ Y++ ++ + + P++IVL G DS FD G LT+ G+ E R
Sbjct: 232 LADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRF 291
Query: 307 VRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
V+S L++ GGY V A C
Sbjct: 292 VKSF-----NIPTLVLGGGGYTVRNVARC 315
>sp|Q56195|ACUC_STAXY Acetoin utilization protein AcuC OS=Staphylococcus xylosus GN=acuC
PE=3 SV=1
Length = 385
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 97/176 (55%), Gaps = 3/176 (1%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HH+ P A+G+C N+ + + + +V+ ID D H+G+GT FY +++ L S+
Sbjct: 136 HHSLPGRANGFCIYNDVAITISYLMQKYNQRVLCIDTDAHHGDGTQWSFYTNDQALIYSI 195
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H G + P +G E G +GFGY +NIPL T D+ ++ + + P + F+P
Sbjct: 196 HET-GKF--LFPGSGHYTERGAEKGFGYTVNIPLEPYTEDQSFLDVFKQTIEPVVASFKP 252
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHV 329
++IV V G D DP T++ E+ IV+SLAD Y+ G++++ GGY++
Sbjct: 253 DIIVSVHGVDVHYLDPLTHMSCTLNTLYEIPYIVKSLADTYTQGKVIMFGGGGYNI 308
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHAQP A G+C N+ + Q +V++ID D H+G+GT FY N V T S+
Sbjct: 136 HHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSI 195
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H G + P +G E GE G+G+ +N+PL T D ++ V P ++ F+P
Sbjct: 196 HET-GKF--LFPGSGHYTERGEDIGYGHTVNVPLEPYTEDSSFLECFKLTVEPVVKSFKP 252
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
++I+ V G D DP T+ E+ V+ LAD Y+ G++++ GGY++
Sbjct: 253 DIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADTYTNGKIIMFGGGGYNI---- 308
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIP 381
++ L+L+ PI + P++ I K Y ++++P
Sbjct: 309 --WRVVPRAWSHVFLSLIDQPI----QSGYLPLEWINKWKHYSSELLP 350
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHAQP A G+C N+ + Q +V++ID D H+G+GT FY N V T S+
Sbjct: 136 HHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSI 195
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H G + P +G E GE G+G+ +N+PL T D ++ V P ++ F+P
Sbjct: 196 HET-GKF--LFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKP 252
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
++I+ V G D DP T+ E+ V+ LAD Y+ G++++ GGY++
Sbjct: 253 DIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNI---- 308
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIP 381
++ L+L+ PI + P++ I K Y ++++P
Sbjct: 309 --WRVVPRAWSHVFLSLIDQPI----QSGYLPLEWINKWKHYSSELLP 350
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHAQP A G+C N+ + Q +V++ID D H+G+GT FY N V T S+
Sbjct: 136 HHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSI 195
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H G + P +G E GE G+G+ +N+PL T D ++ V P ++ F+P
Sbjct: 196 HET-GKF--LFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKP 252
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
++I+ V G D DP T+ E+ V+ LAD Y+ G++++ GGY++
Sbjct: 253 DIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNI---- 308
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIP 381
++ L+L+ PI + P++ I K Y ++++P
Sbjct: 309 --WRVVPRAWSHVFLSLIDQPI----QSGYLPLEWINKWKHYSSELLP 350
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHAQP A G+C N+ + Q +V++ID D H+G+GT FY N V T S+
Sbjct: 136 HHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSI 195
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H G + P +G E GE G+G+ +N+PL T D ++ V P ++ F+P
Sbjct: 196 HET-GKF--LFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKP 252
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
++I+ V G D DP T+ E+ V+ LAD Y+ G++++ GGY++
Sbjct: 253 DIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNI---- 308
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIP 381
++ L+L+ PI + P++ I K Y ++++P
Sbjct: 309 --WRVVPRAWSHVFLSLIDQPI----QSGYLPLEWINKWKHYSSELLP 350
>sp|P64376|ACUC_STAAN Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
N315) GN=acuC PE=1 SV=1
Length = 389
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHAQP A G+C N+ + Q +V++ID D H+G+GT FY N V T S+
Sbjct: 136 HHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSI 195
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H G + P +G E GE G+G+ +N+PL T D ++ V P ++ F+P
Sbjct: 196 HET-GKF--LFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKP 252
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
++I+ V G D DP T+ E+ V+ LAD Y+ G++++ GGY++
Sbjct: 253 DIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNI---- 308
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIP 381
++ L+L+ PI + P++ I K Y ++++P
Sbjct: 309 --WRVVPRAWSHVFLSLIDQPI----QSGYLPLEWINKWKHYSSELLP 350
>sp|P64375|ACUC_STAAM Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=acuC PE=3 SV=1
Length = 389
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 154 HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISL 213
HHAQP A G+C N+ + Q +V++ID D H+G+GT FY N V T S+
Sbjct: 136 HHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSI 195
Query: 214 HMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEP 273
H G + P +G E GE G+G+ +N+PL T D ++ V P ++ F+P
Sbjct: 196 HET-GKF--LFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKP 252
Query: 274 NMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGYHVTYSA 333
++I+ V G D DP T+ E+ V+ LAD Y+ G++++ GGY++
Sbjct: 253 DIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNI---- 308
Query: 334 YCLHATLEGVLNLPLALLSDPIAYYPEDEAFPVKVIESIKQYQNDVIP 381
++ L+L+ PI + P++ I K Y ++++P
Sbjct: 309 --WRVVPRAWSHVFLSLIDQPI----QSGYLPLEWINKWKHYSSELLP 350
>sp|Q569C4|HDA10_RAT Histone deacetylase 10 OS=Rattus norvegicus GN=Hdac10 PE=2 SV=1
Length = 588
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 16/283 (5%)
Query: 52 ENSDRIKNIVSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVC- 110
E +R+ + L++ + S A +L H+P+YI LV+ + K
Sbjct: 26 ECPERLTAALDGLRQRGLEERCQCLSVCEASEEELGLVHSPEYIA-LVQKTQTLDKEELH 84
Query: 111 ------DGTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPGHHAQPTMADGY 164
D +P ++ A LA G L + VL G ALVRPPGHH+Q A+G+
Sbjct: 85 TLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTGAVHNGVALVRPPGHHSQRAAANGF 144
Query: 165 CFLNNAGLAVQLALNS-GCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHM-NHGSWGP 222
C NN +A + A G +++++D DVH+G G F VL S H HG++ P
Sbjct: 145 CVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWP 204
Query: 223 SHPQNGTVDELGEGEGFGYNLNIPLPN-GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVG 281
P++ D +G G G G+ +N+P G G+ Y+ A +++P +F+P ++++ G
Sbjct: 205 FLPESDA-DTVGRGRGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAG 263
Query: 282 QDSSAFDPNGRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQE 324
DS+ DP G+ T + + + ++++ LA GGR+ V E
Sbjct: 264 FDSAIGDPEGQMQATPECFAHLTQLLQVLA----GGRICAVLE 302
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 22/267 (8%)
Query: 79 IPAQIPQLLSFHTPDYINELVEAD----KAGGKMVCDGTV-----LNPGSWGAALLAVGT 129
PA + FH+ +Y+ L A+ K+ K + V L G + L+ G
Sbjct: 61 FPASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGG 120
Query: 130 TLSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVI 188
+L+A + K+ A+ G HHA+ + A G+C+ N+ L + L L +V+ +
Sbjct: 121 SLAAATKL--NKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGI-LELLKYHKRVLYV 177
Query: 189 DIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLNIPLP 248
DIDVH+G+G E FY +++V+T+S H +G P G + ++G G+G Y++N+PL
Sbjct: 178 DIDVHHGDGVEEAFYTTDRVMTVSFH----KYGDFFPGTGDLKDIGAGKGKLYSVNVPLR 233
Query: 249 NGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVR 308
+G D Y ++ +++F+P +VL G DS D G LT+ G+ E R R
Sbjct: 234 DGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFR 293
Query: 309 SLADRYSGGRLLIVQEGGYHVTYSAYC 335
S L++V GGY A C
Sbjct: 294 SY-----NVPLMMVGGGGYTPRNVARC 315
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 134/266 (50%), Gaps = 24/266 (9%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCD--------GTVLNPGSWGAALLAVGTTLS 132
A + ++ +FHT Y+ L + + G + + G + A G TL+
Sbjct: 10 ASMEEMAAFHTDAYLQHLHKVSEEGDNDDPETLEYGLGYDCPITEGIYDYAAAVGGATLT 69
Query: 133 AMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDI 190
A + +++G +IA V PG HHA+ A G+C+LN+A L + L L +V+ +D+
Sbjct: 70 AAEQLIEGKTRIA---VNWPGGWHHAKKDEASGFCYLNDAVLGI-LKLREKFDRVLYVDM 125
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPN 249
D+H+G+G + F ++KV+T+SLH + P P G V ++G G+G Y++N+PL +
Sbjct: 126 DLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVSDIGLGKGRYYSINVPLQD 181
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D Y ++ F P +VL +G D+ A DP +T +G +G+ ++
Sbjct: 182 GIQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMCSFNMTPEG---IGKCLKY 238
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYC 335
+ LI+ GGYH+ +A C
Sbjct: 239 VLQWQL--PTLILGGGGYHLPNTARC 262
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 154/337 (45%), Gaps = 40/337 (11%)
Query: 3 ASPSEPPS--PAAEGIINVFWDDGMLNHDTGKGLFDTGFDPGFLEVLEKHPENSDRIKNI 60
A+P +P + P+ + + F+D + N+ G G HP RI+
Sbjct: 5 ATPFDPITVKPSDKRRVAYFYDADVGNYAYGAG----------------HPMKPHRIRMA 48
Query: 61 VSILKRGPISPYISWHSGIPAQIPQLLSFHTPDYINELVEADKAGGKM---------VCD 111
S++ + + + PA ++ FHT +YI+ L +M V D
Sbjct: 49 HSLIMNYGLYKKMEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLEMFKRESVKFNVGD 108
Query: 112 GTVLNPGSWGAALLAVGTTLSAMKHVLDGHGKIAYALVRPPG-HHAQPTMADGYCFLNNA 170
+ G + ++ G ++ + GK A+ G HHA+ + A G+C+LN+
Sbjct: 109 DCPVFDGLYEYCSISGGGSMEGAARL--NRGKCDVAVNYAGGLHHAKKSEASGFCYLNDI 166
Query: 171 GLAVQLALNSGCGKVVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTV 230
L + + L +V+ IDIDVH+G+G E FY +++V+T S H +G P G +
Sbjct: 167 VLGI-IELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFH----KYGEFFPGTGEL 221
Query: 231 DELGEGEGFGYNLNIPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPN 290
++G G G Y +N+PL +G D Y ++ ++ ++P+ +VL G DS + D
Sbjct: 222 RDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRL 281
Query: 291 GRQCLTMDGYREMGRIVRSLADRYSGGRLLIVQEGGY 327
G L+M+G+ V+S G +++V GGY
Sbjct: 282 GCFNLSMEGHANCVNYVKSF-----GIPMMVVGGGGY 313
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 26/271 (9%)
Query: 76 HSGIPAQIPQLLSFHTPDYINELVEADKAGGKMVCDGTV-LNPGS--------WGAALLA 126
H P ++ Q FH+PDY+ L + + + N G + L
Sbjct: 53 HKAYPIEMAQ---FHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLY 109
Query: 127 VGTTLSAMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGK 184
G T+ A + + + K+ + G HHA+ A G+C++N+ L + L L +
Sbjct: 110 AGGTIDAARRL---NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGI-LELLKHHPR 165
Query: 185 VVVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQNGTVDELGEGEGFGYNLN 244
V+ IDIDVH+G+G E FY +++V+T+S H + P G V E+GE EG Y +N
Sbjct: 166 VLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPG---TGDVKEIGEREGKFYAIN 222
Query: 245 IPLPNGTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMG 304
+PL +G D + ++ ++ ++P IVL G DS A D G L++DG+ E
Sbjct: 223 VPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECV 282
Query: 305 RIVRSLADRYSGGRLLIVQEGGYHVTYSAYC 335
+ V+ LL+ GGY A C
Sbjct: 283 KFVKKF-----NLPLLVTGGGGYTKENVARC 308
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 24/266 (9%)
Query: 81 AQIPQLLSFHTPDYINELVEADKAGGKMVCD--------GTVLNPGSWGAALLAVGTTLS 132
A + ++ +FHT Y+ L + + G + + G + A G TL+
Sbjct: 54 ASMEEMAAFHTDSYLQHLHKVSEEGDNDDPETLEYGLGYDCPITEGIYDYAAAVGGATLT 113
Query: 133 AMKHVLDGHGKIAYALVRPPG--HHAQPTMADGYCFLNNAGLAVQLALNSGCGKVVVIDI 190
A + ++ G +IA + PG HHA+ A G+C+LN+A L + L L +V+ +D+
Sbjct: 114 AAEQLMAGKTRIA---INWPGGWHHAKKDEASGFCYLNDAVLGI-LKLREKFDRVLYVDM 169
Query: 191 DVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSH-PQNGTVDELGEGEGFGYNLNIPLPN 249
D+H+G+G + F ++KV+T+SLH + P P G V ++G G+G Y++N+PL +
Sbjct: 170 DLHHGDGVEDAFSFTSKVMTVSLH----KFSPGFFPGTGDVSDIGLGKGRYYSVNVPLQD 225
Query: 250 GTGDRGYVHAMTELVVPAIQKFEPNMIVLVVGQDSSAFDPNGRQCLTMDGYREMGRIVRS 309
G D Y ++ F P +VL +G D+ A DP +T G +G+ ++
Sbjct: 226 GIQDEKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMCSFNMTPQG---IGKCLKY 282
Query: 310 LADRYSGGRLLIVQEGGYHVTYSAYC 335
+ LI+ GGYH+ +A C
Sbjct: 283 VLQWQL--PTLILGGGGYHLPNTARC 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,693,329
Number of Sequences: 539616
Number of extensions: 8050736
Number of successful extensions: 16065
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 15726
Number of HSP's gapped (non-prelim): 110
length of query: 386
length of database: 191,569,459
effective HSP length: 119
effective length of query: 267
effective length of database: 127,355,155
effective search space: 34003826385
effective search space used: 34003826385
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)