Query 048345
Match_columns 335
No_of_seqs 160 out of 825
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 14:59:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 98.0 2.7E-05 9.4E-10 64.6 10.3 129 174-309 32-162 (166)
2 2bfw_A GLGA glycogen synthase; 97.3 0.0012 4.1E-08 56.0 9.5 125 174-304 70-198 (200)
3 3c48_A Predicted glycosyltrans 96.9 0.0049 1.7E-07 58.7 10.8 94 212-308 317-412 (438)
4 3okp_A GDP-mannose-dependent a 96.9 0.0054 1.9E-07 57.2 10.5 93 212-308 264-366 (394)
5 2gek_A Phosphatidylinositol ma 96.8 0.0035 1.2E-07 58.8 8.8 93 213-308 275-370 (406)
6 2nzw_A Alpha1,3-fucosyltransfe 96.5 0.0059 2E-07 58.3 8.1 109 172-287 179-298 (371)
7 1f0k_A MURG, UDP-N-acetylgluco 96.4 0.007 2.4E-07 56.1 7.7 90 212-307 246-343 (364)
8 2iw1_A Lipopolysaccharide core 96.4 0.019 6.6E-07 53.0 10.6 94 212-308 262-358 (374)
9 2jjm_A Glycosyl transferase, g 96.4 0.017 5.9E-07 54.2 10.4 94 212-308 276-372 (394)
10 3fro_A GLGA glycogen synthase; 96.3 0.016 5.4E-07 54.7 9.7 93 212-308 322-417 (439)
11 1rzu_A Glycogen synthase 1; gl 96.1 0.031 1.1E-06 54.1 11.1 91 213-308 358-462 (485)
12 2qzs_A Glycogen synthase; glyc 95.9 0.02 6.8E-07 55.4 8.5 91 213-308 359-463 (485)
13 2f9f_A First mannosyl transfer 95.7 0.017 5.7E-07 48.4 6.1 81 201-286 79-159 (177)
14 2r60_A Glycosyl transferase, g 95.6 0.042 1.4E-06 53.4 9.5 104 201-308 336-446 (499)
15 2x6q_A Trehalose-synthase TRET 94.8 0.13 4.3E-06 48.5 9.8 91 213-308 308-401 (416)
16 2iuy_A Avigt4, glycosyltransfe 94.8 0.049 1.7E-06 49.9 6.7 87 212-308 223-322 (342)
17 3oy2_A Glycosyltransferase B73 94.6 0.05 1.7E-06 51.2 6.5 92 213-308 266-377 (413)
18 2x0d_A WSAF; GT4 family, trans 94.5 0.021 7.1E-07 55.0 3.5 97 212-313 306-402 (413)
19 3rhz_A GTF3, nucleotide sugar 94.2 0.045 1.5E-06 51.5 5.0 91 212-307 225-322 (339)
20 2vsy_A XCC0866; transferase, g 93.4 0.56 1.9E-05 46.1 11.7 100 213-327 446-562 (568)
21 1vgv_A UDP-N-acetylglucosamine 92.3 0.052 1.8E-06 50.5 2.3 77 212-297 274-352 (384)
22 3vue_A GBSS-I, granule-bound s 92.1 0.25 8.7E-06 49.1 7.0 92 213-309 394-499 (536)
23 3beo_A UDP-N-acetylglucosamine 90.2 0.15 5E-06 47.1 3.0 75 213-296 275-351 (375)
24 3s28_A Sucrose synthase 1; gly 88.6 0.73 2.5E-05 48.4 7.1 94 213-309 656-757 (816)
25 1uqt_A Alpha, alpha-trehalose- 85.0 2.4 8.3E-05 41.5 8.3 92 211-307 342-440 (482)
26 3nb0_A Glycogen [starch] synth 80.1 2.8 9.6E-05 43.1 6.6 95 212-309 510-621 (725)
27 2hy7_A Glucuronosyltransferase 72.9 3.2 0.00011 39.2 4.6 64 212-284 276-347 (406)
28 3s2u_A UDP-N-acetylglucosamine 70.8 15 0.00051 34.0 8.6 94 213-324 245-351 (365)
29 1v4v_A UDP-N-acetylglucosamine 68.7 7.1 0.00024 35.7 5.8 75 213-296 267-343 (376)
30 3dzc_A UDP-N-acetylglucosamine 68.2 9.1 0.00031 36.0 6.6 93 212-324 299-394 (396)
31 2o6l_A UDP-glucuronosyltransfe 67.8 24 0.00083 28.2 8.4 84 214-304 78-167 (170)
32 2ygg_A Sodium/hydrogen exchang 61.0 12 0.00041 26.5 4.4 46 286-331 4-54 (70)
33 3ot5_A UDP-N-acetylglucosamine 55.5 17 0.00059 34.2 6.0 94 213-325 294-389 (403)
34 3otg_A CALG1; calicheamicin, T 46.7 5.5 0.00019 36.8 0.9 86 213-303 301-392 (412)
35 4fzr_A SSFS6; structural genom 45.1 21 0.0007 32.9 4.6 82 213-301 293-382 (398)
36 3q3e_A HMW1C-like glycosyltran 38.3 1.2E+02 0.0041 30.6 9.2 121 201-328 500-627 (631)
37 3oti_A CALG3; calicheamicin, T 35.5 2.5E+02 0.0085 25.3 13.8 83 213-302 292-380 (398)
38 2xci_A KDO-transferase, 3-deox 34.4 27 0.00091 32.3 3.5 41 212-253 269-310 (374)
39 2xze_Q Charged multivesicular 30.0 34 0.0012 21.5 2.3 14 289-302 26-39 (40)
40 3h4t_A Glycosyltransferase GTF 29.3 1.4E+02 0.0049 27.4 7.7 86 213-306 277-366 (404)
41 4dx8_H KREV interaction trappe 25.4 28 0.00095 29.3 1.6 26 48-73 109-134 (203)
42 2yjn_A ERYCIII, glycosyltransf 23.8 24 0.00081 33.2 1.1 68 214-286 329-400 (441)
43 3t5t_A Putative glycosyltransf 23.5 1E+02 0.0035 30.0 5.7 86 211-300 362-452 (496)
44 1iir_A Glycosyltransferase GTF 22.7 56 0.0019 30.2 3.5 85 213-305 294-382 (415)
45 2q2k_A Hypothetical protein; p 20.1 1.4E+02 0.0049 19.9 4.0 39 265-303 25-64 (70)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.04 E-value=2.7e-05 Score=64.56 Aligned_cols=129 Identities=12% Similarity=0.154 Sum_probs=83.1
Q ss_pred cEEEEEecCCCchhHHHHHHHhccCCCCeEEeecccCcccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecc
Q 048345 174 SVFAFFAGGAHGDVRKLLFQHWKDKDDEIQVHEYLPKGQDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDH 253 (335)
Q Consensus 174 ~~l~~F~G~~~~~iR~~L~~~~~~~~~~v~~~~~~~~~~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~ 253 (335)
++-+.+.|. |..+..+.+.....+..+.+ +..+ ..+..+.++.|..++.|.-......-+.|||++||+|||.++.
T Consensus 32 ~~~l~i~G~--g~~~~~~~~~~~~~~~~v~~-g~~~-~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~ 107 (166)
T 3qhp_A 32 DIVLLLKGK--GPDEKKIKLLAQKLGVKAEF-GFVN-SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSP 107 (166)
T ss_dssp GEEEEEECC--STTHHHHHHHHHHHTCEEEC-CCCC-HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCT
T ss_pred CeEEEEEeC--CccHHHHHHHHHHcCCeEEE-eecC-HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCC
Confidence 566777775 33344444433322223444 4333 4578899999999999976656678899999999999999443
Q ss_pred cccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHHHHHHHHHHHHHhhhhceecC
Q 048345 254 YALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDDKYLELQMNVVQVQRHFVLNR 309 (335)
Q Consensus 254 ~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~~~~~m~~~~~~~~~~f~~~~ 309 (335)
.- ...+++.-... .++..+..++.+.|..+ +++...+|.++.+...+.|.|..
T Consensus 108 ~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 108 LS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp TC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred CC-chhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence 11 12233333333 56777777766665554 67788899998888778888864
No 2
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.27 E-value=0.0012 Score=56.04 Aligned_cols=125 Identities=15% Similarity=0.139 Sum_probs=81.6
Q ss_pred cEEEEEecCCCchhHHHHHHHhccCCCCeEE-eecccCcccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeec
Q 048345 174 SVFAFFAGGAHGDVRKLLFQHWKDKDDEIQV-HEYLPKGQDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISD 252 (335)
Q Consensus 174 ~~l~~F~G~~~~~iR~~L~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d 252 (335)
++-+.+.|......+..+.+.....+ .|.+ .+.. ...+..+.|+.|.++++|.-....+.-++|||++|| |||.++
T Consensus 70 ~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~-~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~ 146 (200)
T 2bfw_A 70 EMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEML-SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASA 146 (200)
T ss_dssp GEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCC-CHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEES
T ss_pred CeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccC-CHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-CEEEeC
Confidence 35566777633224555554444333 5555 4433 234788999999999999866666788999999998 677776
Q ss_pred ccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC---CHHHHHHHHHHHHHhhhh
Q 048345 253 HYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV---SDDKYLELQMNVVQVQRH 304 (335)
Q Consensus 253 ~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i---~~~~~~~m~~~~~~~~~~ 304 (335)
.-. +.+++ -....+.++..+..++.+.|..+ +++...+|.++.+...+.
T Consensus 147 ~~~--~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 147 VGG--LRDII-TNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp CHH--HHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--hHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 421 22334 23445667777777766666554 678888888888775443
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.90 E-value=0.0049 Score=58.72 Aligned_cols=94 Identities=16% Similarity=0.143 Sum_probs=69.2
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDD 289 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~ 289 (335)
.+..+.|+.+..++.|.-......-++|||++|| |||.++.- ...+++.-....+.++..+..++.+.|..+ +++
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 393 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVG--GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDE 393 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCT--THHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCC--ChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHH
Confidence 3578899999999999766566778999999998 78888742 233445445567778888888776666554 567
Q ss_pred HHHHHHHHHHHhhhhceec
Q 048345 290 KYLELQMNVVQVQRHFVLN 308 (335)
Q Consensus 290 ~~~~m~~~~~~~~~~f~~~ 308 (335)
...+|.++.++..+.|.|.
T Consensus 394 ~~~~~~~~~~~~~~~~s~~ 412 (438)
T 3c48_A 394 TRIRMGEDAVEHARTFSWA 412 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHH
Confidence 7788888877765447775
No 4
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=96.85 E-value=0.0054 Score=57.15 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=70.5
Q ss_pred ccHHHhhhcceeEeecCCC-------CCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHc
Q 048345 212 QDYMKTMRRSKFCLCPSGF-------EVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILK 284 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~-------~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~ 284 (335)
.+..+.++.|++++.|.-. .....-++|||++|| |||.++.- ...+++.-. ..+.++..+..++.+.|.
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~~~-~g~~~~~~d~~~l~~~i~ 339 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGTSG--GAPETVTPA-TGLVVEGSDVDKLSELLI 339 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-CEEECSST--TGGGGCCTT-TEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC-CEEEeCCC--ChHHHHhcC-CceEeCCCCHHHHHHHHH
Confidence 4688899999999999765 555678999999996 78887742 344556555 777888888887766666
Q ss_pred CC--CHHHHHHHHHHHHHh-hhhceec
Q 048345 285 GV--SDDKYLELQMNVVQV-QRHFVLN 308 (335)
Q Consensus 285 ~i--~~~~~~~m~~~~~~~-~~~f~~~ 308 (335)
.+ +++...+|.++.+.. .+.|.|.
T Consensus 340 ~l~~~~~~~~~~~~~~~~~~~~~~s~~ 366 (394)
T 3okp_A 340 ELLDDPIRRAAMGAAGRAHVEAEWSWE 366 (394)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTBHH
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 54 677888888887764 5578885
No 5
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=96.80 E-value=0.0035 Score=58.85 Aligned_cols=93 Identities=24% Similarity=0.222 Sum_probs=67.1
Q ss_pred cHHHhhhcceeEeecCC-CCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHH
Q 048345 213 DYMKTMRRSKFCLCPSG-FEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDD 289 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G-~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~ 289 (335)
+..+.|+.|++++.|.. ......-++||+++|| |||.++.-. +.+++.-....+.++..+..++.+.|..+ +++
T Consensus 275 ~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~ 351 (406)
T 2gek_A 275 TKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDA--FRRVLADGDAGRLVPVDDADGMAAALIGILEDDQ 351 (406)
T ss_dssp HHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHH--HHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCc--HHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 56899999999999953 4445678999999998 788887522 22334334455677777888777766665 577
Q ss_pred HHHHHHHHHHHhhhhceec
Q 048345 290 KYLELQMNVVQVQRHFVLN 308 (335)
Q Consensus 290 ~~~~m~~~~~~~~~~f~~~ 308 (335)
...+|.++.+...+.|.|.
T Consensus 352 ~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 352 LRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HHHHHHHHHHHHGGGGBHH
T ss_pred HHHHHHHHHHHHHHhCCHH
Confidence 7888888888766677774
No 6
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=96.52 E-value=0.0059 Score=58.26 Aligned_cols=109 Identities=11% Similarity=0.241 Sum_probs=73.6
Q ss_pred CCcEEEEEecCCCchhHHHHHHHhccCCCCeEEeecccC-----cccHHHhhhcceeEeecCC---CCCCChhHHHHHHh
Q 048345 172 GASVFAFFAGGAHGDVRKLLFQHWKDKDDEIQVHEYLPK-----GQDYMKTMRRSKFCLCPSG---FEVASPRLVEAIYV 243 (335)
Q Consensus 172 ~R~~l~~F~G~~~~~iR~~L~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~S~Fcl~p~G---~~~~s~rl~dal~~ 243 (335)
+++..+++..++....|..+++.+... ..|.+++.|.+ .....+.+++-+|.|+... ..-.+..|++|+.+
T Consensus 179 K~k~v~wvvSnc~~~~R~~~~~~L~k~-i~Vd~~G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~ 257 (371)
T 2nzw_A 179 KRGFASFVASNPNAPIRNAFYDALNSI-EPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFS 257 (371)
T ss_dssp SSEEEEECCSCCCCHHHHHHHHHHTTT-SCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHT
T ss_pred CceEEEEEEeCCCcHHHHHHHHHHhCc-CCEeeCCCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhC
Confidence 334444556666666898888888754 34666655421 2457889999999998754 34567899999999
Q ss_pred CceEEEeecc-c--ccCCCCCCCCCcEEEEeccCCHHHHHHHHcCCC
Q 048345 244 GCVPVIISDH-Y--ALPFSDVLDWSQFSIQIPVDKILEIKTILKGVS 287 (335)
Q Consensus 244 GcIPVii~d~-~--~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i~ 287 (335)
|||||+++.. + .+|=...|+..+| +...+|.+.|+.++
T Consensus 258 g~VPI~~G~~~~~~~~Pp~SfI~~~dF------~s~~~La~yL~~L~ 298 (371)
T 2nzw_A 258 HTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLH 298 (371)
T ss_dssp TCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHH
T ss_pred CeEEEEECCCchhhhCCCCceEEcccC------CCHHHHHHHHHHHh
Confidence 9999999864 2 2343445555544 35667777776654
No 7
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=96.39 E-value=0.007 Score=56.08 Aligned_cols=90 Identities=13% Similarity=0.121 Sum_probs=65.5
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCC------CCCCCCCcEEEEeccCC--HHHHHHHH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPF------SDVLDWSQFSIQIPVDK--ILEIKTIL 283 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf------~~~idw~~~~v~i~~~~--~~~l~~~L 283 (335)
.+..+.|+.++.+++|.| ..-+.||+++|| |||.++.--.|. ..+++-.. .+.++..+ ..+|.+.|
T Consensus 246 ~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i 319 (364)
T 1f0k_A 246 DDMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTL 319 (364)
T ss_dssp SCHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHH
T ss_pred hhHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHH
Confidence 367899999999999976 466999999997 888886432221 12333333 77788877 88899998
Q ss_pred cCCCHHHHHHHHHHHHHhhhhcee
Q 048345 284 KGVSDDKYLELQMNVVQVQRHFVL 307 (335)
Q Consensus 284 ~~i~~~~~~~m~~~~~~~~~~f~~ 307 (335)
..++++...+|.++.+...+.|.|
T Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~ 343 (364)
T 1f0k_A 320 AGWSRETLLTMAERARAASIPDAT 343 (364)
T ss_dssp HTCCHHHHHHHHHHHHHTCCTTHH
T ss_pred HhcCHHHHHHHHHHHHHhhccCHH
Confidence 888667778888877766555554
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=96.37 E-value=0.019 Score=53.01 Aligned_cols=94 Identities=18% Similarity=0.172 Sum_probs=68.3
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEec-cCCHHHHHHHHcCC--CH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIP-VDKILEIKTILKGV--SD 288 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~-~~~~~~l~~~L~~i--~~ 288 (335)
.+..+.|+.|..++.|.-....+.-++|||++|| |||.++.- ...+.+.-....+.++ ..+..++.+.|..+ ++
T Consensus 262 ~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~--~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 262 NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVC--GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTS--TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCH
T ss_pred ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCC--CchhhhccCCceEEeCCCCCHHHHHHHHHHHHcCh
Confidence 4688999999999999765556778999999998 88888752 2233343345566776 66777766666554 67
Q ss_pred HHHHHHHHHHHHhhhhceec
Q 048345 289 DKYLELQMNVVQVQRHFVLN 308 (335)
Q Consensus 289 ~~~~~m~~~~~~~~~~f~~~ 308 (335)
+...+|.++.++..+.+.|.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~ 358 (374)
T 2iw1_A 339 PLRMAWAENARHYADTQDLY 358 (374)
T ss_dssp HHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 78888988888877666654
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.37 E-value=0.017 Score=54.18 Aligned_cols=94 Identities=14% Similarity=0.103 Sum_probs=71.1
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDD 289 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~ 289 (335)
.+..+.|+.++.++.|.-......-++|||++|| |||.++.- ...+++.-.+..+.++..+..++.+.|..+ +++
T Consensus 276 ~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-PvI~~~~~--~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 352 (394)
T 2jjm_A 276 DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGV-PCIGTRVG--GIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEE 352 (394)
T ss_dssp SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTC-CEEEECCT--TSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHH
T ss_pred hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCC-CEEEecCC--ChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 4678999999999999765556778999999995 78777742 345666555667788888888776666554 567
Q ss_pred HHHHHHHHHHHhh-hhceec
Q 048345 290 KYLELQMNVVQVQ-RHFVLN 308 (335)
Q Consensus 290 ~~~~m~~~~~~~~-~~f~~~ 308 (335)
...+|.++.+... +.|.|.
T Consensus 353 ~~~~~~~~~~~~~~~~~s~~ 372 (394)
T 2jjm_A 353 LHRNMGERARESVYEQFRSE 372 (394)
T ss_dssp HHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHhCCHH
Confidence 7888888887755 788875
No 10
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.29 E-value=0.016 Score=54.68 Aligned_cols=93 Identities=17% Similarity=0.155 Sum_probs=67.4
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC---CH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV---SD 288 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i---~~ 288 (335)
.+..+.++.|..++.|.-......-++|||++|| |||.++.-. ..++++=. ..+.++..+..++.+.|..+ ++
T Consensus 322 ~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~~--~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~~ 397 (439)
T 3fro_A 322 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGG--LRDIITNE-TGILVKAGDPGELANAILKALELSR 397 (439)
T ss_dssp HHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESSTH--HHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCCC--cceeEEcC-ceEEeCCCCHHHHHHHHHHHHhcCH
Confidence 3577899999999999776666788999999996 788876421 22344322 56677888888776666643 45
Q ss_pred HHHHHHHHHHHHhhhhceec
Q 048345 289 DKYLELQMNVVQVQRHFVLN 308 (335)
Q Consensus 289 ~~~~~m~~~~~~~~~~f~~~ 308 (335)
+...+|.++.+...+.|.|.
T Consensus 398 ~~~~~~~~~~~~~~~~~s~~ 417 (439)
T 3fro_A 398 SDLSKFRENCKKRAMSFSWE 417 (439)
T ss_dssp TTTHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHHHHhhCcHH
Confidence 67788888888766778774
No 11
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.13 E-value=0.031 Score=54.05 Aligned_cols=91 Identities=12% Similarity=0.120 Sum_probs=61.8
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCC---------cEEEEeccCCHHHHHHHH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWS---------QFSIQIPVDKILEIKTIL 283 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~---------~~~v~i~~~~~~~l~~~L 283 (335)
...+.++.+..++.|.-......-+.|||++|| |||.++.-- ..+++.=. ...+.++..+..++.+.|
T Consensus 358 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~gg--~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i 434 (485)
T 1rzu_A 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGG--LADTVIDANHAALASKAATGVQFSPVTLDGLKQAI 434 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHH--HHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHH
T ss_pred HHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCCC--hhheecccccccccccCCcceEeCCCCHHHHHHHH
Confidence 346889999999999765556677999999997 677776421 12333322 455677888887776666
Q ss_pred cCC-----CHHHHHHHHHHHHHhhhhceec
Q 048345 284 KGV-----SDDKYLELQMNVVQVQRHFVLN 308 (335)
Q Consensus 284 ~~i-----~~~~~~~m~~~~~~~~~~f~~~ 308 (335)
..+ +++...+|.++.+. +.|.|.
T Consensus 435 ~~ll~~~~~~~~~~~~~~~~~~--~~fs~~ 462 (485)
T 1rzu_A 435 RRTVRYYHDPKLWTQMQKLGMK--SDVSWE 462 (485)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHT--CCCBHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHH--HhCChH
Confidence 553 56667777776643 566663
No 12
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=95.90 E-value=0.02 Score=55.42 Aligned_cols=91 Identities=11% Similarity=0.103 Sum_probs=62.4
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCC---------cEEEEeccCCHHHHHHHH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWS---------QFSIQIPVDKILEIKTIL 283 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~---------~~~v~i~~~~~~~l~~~L 283 (335)
...+.|+.+..++.|.-......-+.|||++|| |||.++.-- ..+++.=. ...+.++..+..++.+.|
T Consensus 359 ~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~gg--~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i 435 (485)
T 2qzs_A 359 FSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTGG--LADTVSDCSLENLADGVASGFVFEDSNAWSLLRAI 435 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHH--HHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCCC--ccceeccCccccccccccceEEECCCCHHHHHHHH
Confidence 346889999999999765556677999999997 677776421 22333322 556778888888776666
Q ss_pred cCC-----CHHHHHHHHHHHHHhhhhceec
Q 048345 284 KGV-----SDDKYLELQMNVVQVQRHFVLN 308 (335)
Q Consensus 284 ~~i-----~~~~~~~m~~~~~~~~~~f~~~ 308 (335)
..+ +++...+|.++.+. +.|.|.
T Consensus 436 ~~ll~~~~~~~~~~~~~~~~~~--~~fs~~ 463 (485)
T 2qzs_A 436 RRAFVLWSRPSLWRFVQRQAMA--MDFSWQ 463 (485)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHH--CCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHh--hcCCHH
Confidence 553 56667777776643 566664
No 13
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=95.69 E-value=0.017 Score=48.36 Aligned_cols=81 Identities=20% Similarity=0.228 Sum_probs=52.8
Q ss_pred CeEEeecccCcccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHH
Q 048345 201 EIQVHEYLPKGQDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIK 280 (335)
Q Consensus 201 ~v~~~~~~~~~~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~ 280 (335)
.|.+.+..+ ..+..+.++.|..++.|.-......-++|||++|| |||.++.-. ..+.+.-....+.+ ..+..++.
T Consensus 79 ~v~~~g~~~-~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 79 NVKFLGSVS-EEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEGG--FKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp TEEEEESCC-HHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESSHH--HHHHCCBTTTEEEE-CSCHHHHH
T ss_pred cEEEeCCCC-HHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCCCC--HHHHhcCCCccEEe-CCCHHHHH
Confidence 455544332 34578999999999997654445677999999998 788877421 23344434445555 77777666
Q ss_pred HHHcCC
Q 048345 281 TILKGV 286 (335)
Q Consensus 281 ~~L~~i 286 (335)
+.|..+
T Consensus 154 ~~i~~l 159 (177)
T 2f9f_A 154 DAMKKV 159 (177)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655543
No 14
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=95.61 E-value=0.042 Score=53.43 Aligned_cols=104 Identities=14% Similarity=0.170 Sum_probs=69.5
Q ss_pred CeEEeecccCcccHHHhhhcc----eeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCH
Q 048345 201 EIQVHEYLPKGQDYMKTMRRS----KFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKI 276 (335)
Q Consensus 201 ~v~~~~~~~~~~~~~~~~~~S----~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~ 276 (335)
.|.+.+.. ...+..+.|+.+ ..++.|.-......-+.|||++|| |||.++.-- ..+++.-....+.++..+.
T Consensus 336 ~V~~~G~v-~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~g--~~e~v~~~~~g~l~~~~d~ 411 (499)
T 2r60_A 336 KVSMFPLN-SQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNGG--PAEILDGGKYGVLVDPEDP 411 (499)
T ss_dssp TEEEEECC-SHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSBH--HHHHTGGGTSSEEECTTCH
T ss_pred eEEECCCC-CHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCCC--HHHHhcCCceEEEeCCCCH
Confidence 35554433 234678999999 999988655445677999999998 788887421 2233433344566777787
Q ss_pred HHHHHHHcCC--CHHHHHHHHHHHHHh-hhhceec
Q 048345 277 LEIKTILKGV--SDDKYLELQMNVVQV-QRHFVLN 308 (335)
Q Consensus 277 ~~l~~~L~~i--~~~~~~~m~~~~~~~-~~~f~~~ 308 (335)
.++.+.|..+ +++...+|.++.+.. .+.|.|.
T Consensus 412 ~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~ 446 (499)
T 2r60_A 412 EDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQ 446 (499)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 7766655543 567778888877764 4568885
No 15
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=94.77 E-value=0.13 Score=48.50 Aligned_cols=91 Identities=15% Similarity=0.078 Sum_probs=62.3
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHHH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDDK 290 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~~ 290 (335)
+..+.|+.+..++.|.-......-++|||++|| |||.++.-- ..+++.=....+.++ +..++.+.|..+ +++.
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g--~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~~ 382 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGG--IKFQIVDGETGFLVR--DANEAVEVVLYLLKHPEV 382 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHH--HHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCC--ChhheecCCCeEEEC--CHHHHHHHHHHHHhCHHH
Confidence 577889999999998755555678999999998 788887521 123333233445555 666665555543 5677
Q ss_pred HHHHHHHHHHh-hhhceec
Q 048345 291 YLELQMNVVQV-QRHFVLN 308 (335)
Q Consensus 291 ~~~m~~~~~~~-~~~f~~~ 308 (335)
..+|.++.+.. .+.|.|.
T Consensus 383 ~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 383 SKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp HHHHHHHHHHHHHHHTBHH
T ss_pred HHHHHHHHHHHHHHHcCHH
Confidence 88888887764 4578874
No 16
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=94.76 E-value=0.049 Score=49.95 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=60.3
Q ss_pred ccHHHhhhcceeEeecCC----------CCCCChhHHHHHHhCceEEEeecccccCCCCCCCC--CcEEEEeccCCHHHH
Q 048345 212 QDYMKTMRRSKFCLCPSG----------FEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDW--SQFSIQIPVDKILEI 279 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G----------~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw--~~~~v~i~~~~~~~l 279 (335)
.+..+.|+++..++.|.- ......-+.|||++|| |||.++.- ...+++.- .+..+.++. +..++
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~~~~~g~~~~~-d~~~l 298 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNG--CLAEIVPSVGEVVGYGTDF-APDEA 298 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCTT--THHHHGGGGEEECCSSSCC-CHHHH
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCCC--ChHHHhcccCCCceEEcCC-CHHHH
Confidence 356899999999999876 4555678999999997 88888742 23344443 345556677 88898
Q ss_pred HHHHcCCCHHHHHHHHHHHH-Hhhhhceec
Q 048345 280 KTILKGVSDDKYLELQMNVV-QVQRHFVLN 308 (335)
Q Consensus 280 ~~~L~~i~~~~~~~m~~~~~-~~~~~f~~~ 308 (335)
.+.|..+-+ .++.+ .+.+.|.|.
T Consensus 299 ~~~i~~l~~------~~~~~~~~~~~~s~~ 322 (342)
T 2iuy_A 299 RRTLAGLPA------SDEVRRAAVRLWGHV 322 (342)
T ss_dssp HHHHHTSCC------HHHHHHHHHHHHBHH
T ss_pred HHHHHHHHH------HHHHHHHHHHhcCHH
Confidence 888888754 22333 344677774
No 17
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=94.61 E-value=0.05 Score=51.21 Aligned_cols=92 Identities=13% Similarity=0.032 Sum_probs=62.7
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCc--------E-------EE--EeccCC
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQ--------F-------SI--QIPVDK 275 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~--------~-------~v--~i~~~~ 275 (335)
+..+.++.|..++.|.-......-+.|||++|| |||.++.-- ..++++-.. . .+ .++..+
T Consensus 266 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g--~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d 342 (413)
T 3oy2_A 266 RVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGG--ADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIID 342 (413)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHH--HHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECC
T ss_pred HHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCC--hHHHHccCcccccccccccccccccCcceeeCCCC
Confidence 577889999999998766556778999999997 888887521 112221111 1 33 566667
Q ss_pred HHHHHHHHcCC--CHHHHHHHHHHHHHh-hhhceec
Q 048345 276 ILEIKTILKGV--SDDKYLELQMNVVQV-QRHFVLN 308 (335)
Q Consensus 276 ~~~l~~~L~~i--~~~~~~~m~~~~~~~-~~~f~~~ 308 (335)
..++.+.| .+ +++...+|.++.++. .+.|.|.
T Consensus 343 ~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~ 377 (413)
T 3oy2_A 343 VDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWD 377 (413)
T ss_dssp HHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHH
Confidence 77766666 43 466778888887775 4678875
No 18
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.46 E-value=0.021 Score=55.03 Aligned_cols=97 Identities=13% Similarity=0.061 Sum_probs=60.5
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCCCHHHH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGVSDDKY 291 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i~~~~~ 291 (335)
.+..+.++.+..+++|.-....+.-+.|||++|| |||.++. ...++++-..-.+.++..+...|.+.|..+-+..-
T Consensus 306 ~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~---g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 306 EDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY---ENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp HHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB---TTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC---CcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 4678999999999998643223456899999998 7777543 22466655666788899998887777665432211
Q ss_pred HHHHHHHHHhhhhceecCCCCC
Q 048345 292 LELQMNVVQVQRHFVLNRPAKP 313 (335)
Q Consensus 292 ~~m~~~~~~~~~~f~~~~~~~~ 313 (335)
.+.+ +.+...+.|.|...-..
T Consensus 382 ~~~~-~~~~~~~~~~W~~~~~~ 402 (413)
T 2x0d_A 382 NRDV-DKKESSNMMFYINEFNE 402 (413)
T ss_dssp --------CCBSCGGGCCCC--
T ss_pred HHHH-hHHHHHHhCCHHHHHHH
Confidence 1112 33344457899754433
No 19
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=94.17 E-value=0.045 Score=51.49 Aligned_cols=91 Identities=21% Similarity=0.257 Sum_probs=65.4
Q ss_pred ccHHHhhhcceeEeecCCC-------CCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHc
Q 048345 212 QDYMKTMRRSKFCLCPSGF-------EVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILK 284 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~-------~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~ 284 (335)
.+..+.++++.|+|+..-. ......++|+|++|+ |||+++.-.+ .+++.=....+.++ ++.++.+.|.
T Consensus 225 ~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~-PVI~~~~~~~--~~~v~~~~~G~~~~--~~~e~~~~i~ 299 (339)
T 3rhz_A 225 EQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGI-PVIVQEGIAN--QELIENNGLGWIVK--DVEEAIMKVK 299 (339)
T ss_dssp HHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTC-CEEEETTCTT--THHHHHHTCEEEES--SHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCC-CEEEccChhH--HHHHHhCCeEEEeC--CHHHHHHHHH
Confidence 4567788889999997211 122457999999996 9998874322 23333344555554 5788999999
Q ss_pred CCCHHHHHHHHHHHHHhhhhcee
Q 048345 285 GVSDDKYLELQMNVVQVQRHFVL 307 (335)
Q Consensus 285 ~i~~~~~~~m~~~~~~~~~~f~~ 307 (335)
.++++++.+|+++.++..+.+.+
T Consensus 300 ~l~~~~~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 300 NVNEDEYIELVKNVRSFNPILRK 322 (339)
T ss_dssp HCCHHHHHHHHHHHHHHTHHHHT
T ss_pred HhCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999988776664
No 20
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=93.42 E-value=0.56 Score=46.07 Aligned_cols=100 Identities=16% Similarity=0.246 Sum_probs=61.9
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEe-------eccc-----ccCCCCCCCCCcEEEEeccCCHHHHH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVII-------SDHY-----ALPFSDVLDWSQFSIQIPVDKILEIK 280 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii-------~d~~-----~lPf~~~idw~~~~v~i~~~~~~~l~ 280 (335)
+..+.|+.+..++.|.-. ....-+.|||.+|| |||. ++.- ..-..+++. ++..++.
T Consensus 446 ~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~-Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~----------~~~~~la 513 (568)
T 2vsy_A 446 QYLARYRHADLFLDTHPY-NAHTTASDALWTGC-PVLTTPGETFAARVAGSLNHHLGLDEMNV----------ADDAAFV 513 (568)
T ss_dssp HHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC-CEEBCCCSSGGGSHHHHHHHHHTCGGGBC----------SSHHHHH
T ss_pred HHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC-CEEeccCCCchHHHHHHHHHHCCChhhhc----------CCHHHHH
Confidence 678899999999988766 55678999999997 9999 5532 001122221 1554444
Q ss_pred HHHcCC--CHHHHHHHHHHHHHhh---hhceecCCCCCCCHHHHHHHHHHHH
Q 048345 281 TILKGV--SDDKYLELQMNVVQVQ---RHFVLNRPAKPFDALHMVLHSVWLR 327 (335)
Q Consensus 281 ~~L~~i--~~~~~~~m~~~~~~~~---~~f~~~~~~~~~dAf~~~~~~l~~r 327 (335)
+.+..+ +++...+|+++++... +.|.|.. -.+.+..+..+++.+
T Consensus 514 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~---~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 514 AKAVALASDPAALTALHARVDVLRRASGVFHMDG---FADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHH---HHHHHHHHHHHHHHH
Confidence 444332 5677888888887654 6677642 113334444455443
No 21
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=92.34 E-value=0.052 Score=50.46 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=48.9
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDD 289 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~ 289 (335)
.+..+.|+.|..++.|.|. . +.||+++|+ |||.++..- ...++++-. ..+.++. +..+|.+.+..+ +++
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~----~-~lEA~a~G~-PvI~~~~~~-~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGG----I-QEEAPSLGK-PVLVMRDTT-ERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp HHHHHHHHHCSEEEESSST----G-GGTGGGGTC-CEEEESSCC-SCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCcEEEECCcc----h-HHHHHHcCC-CEEEccCCC-CcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhChH
Confidence 3567889999998888732 2 789999997 999887521 122334333 5666655 666666655553 445
Q ss_pred HHHHHHHH
Q 048345 290 KYLELQMN 297 (335)
Q Consensus 290 ~~~~m~~~ 297 (335)
...+|.++
T Consensus 345 ~~~~~~~~ 352 (384)
T 1vgv_A 345 EYQAMSRA 352 (384)
T ss_dssp HHHHHHSS
T ss_pred HHhhhhhc
Confidence 55555443
No 22
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.06 E-value=0.25 Score=49.14 Aligned_cols=92 Identities=15% Similarity=0.166 Sum_probs=55.4
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCC-C-CCcE--------EEEeccCCHHHHHH-
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVL-D-WSQF--------SIQIPVDKILEIKT- 281 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~i-d-w~~~--------~v~i~~~~~~~l~~- 281 (335)
...+.++.|...+.|.=..+...-+.|||++||.+| .++.--+| |+| | -+.| ...++..+...|.+
T Consensus 394 ~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI-~s~~gG~~--e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~a 470 (536)
T 3vue_A 394 LAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCA-CASTGGLV--DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAAT 470 (536)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEE-ECSCTHHH--HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEE-EcCCCCch--heeeCCCCccccccCCCceeEECCCCHHHHHHH
Confidence 355788999999999766666678999999998655 45421111 111 1 0111 12345555555444
Q ss_pred ---HHcCCCHHHHHHHHHHHHHhhhhceecC
Q 048345 282 ---ILKGVSDDKYLELQMNVVQVQRHFVLNR 309 (335)
Q Consensus 282 ---~L~~i~~~~~~~m~~~~~~~~~~f~~~~ 309 (335)
.|+...++.+.+|+++. +.+.|.|..
T Consensus 471 i~ral~~~~~~~~~~~~~~a--m~~~fSW~~ 499 (536)
T 3vue_A 471 LKRAIKVVGTPAYEEMVRNC--MNQDLSWKG 499 (536)
T ss_dssp HHHHHHHTTSHHHHHHHHHH--HHSCCSSHH
T ss_pred HHHHHHhcCcHHHHHHHHHH--HHhcCCHHH
Confidence 44444666778887765 457788864
No 23
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=90.23 E-value=0.15 Score=47.11 Aligned_cols=75 Identities=16% Similarity=0.135 Sum_probs=47.2
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHHH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDDK 290 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~~ 290 (335)
+..+.|+.+.+++.|.| .-+.||+++|+ |||.++..- ...++++-. ..+.++. +..+|.+.|..+ +++.
T Consensus 275 ~~~~~~~~ad~~v~~sg-----~~~lEA~a~G~-Pvi~~~~~~-~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll~~~~~ 345 (375)
T 3beo_A 275 DFHNVAARSYLMLTDSG-----GVQEEAPSLGV-PVLVLRDTT-ERPEGIEAG-TLKLAGT-DEETIFSLADELLSDKEA 345 (375)
T ss_dssp HHHHHHHTCSEEEECCH-----HHHHHHHHHTC-CEEECSSCC-SCHHHHHTT-SEEECCS-CHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHhCcEEEECCC-----ChHHHHHhcCC-CEEEecCCC-CCceeecCC-ceEEcCC-CHHHHHHHHHHHHhChHh
Confidence 56788999999998862 22899999997 899885421 122344433 5556654 766666655543 3444
Q ss_pred HHHHHH
Q 048345 291 YLELQM 296 (335)
Q Consensus 291 ~~~m~~ 296 (335)
..+|.+
T Consensus 346 ~~~~~~ 351 (375)
T 3beo_A 346 HDKMSK 351 (375)
T ss_dssp HHHHCC
T ss_pred Hhhhhh
Confidence 444443
No 24
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=88.55 E-value=0.73 Score=48.39 Aligned_cols=94 Identities=12% Similarity=0.127 Sum_probs=63.4
Q ss_pred cHHHhhh-cceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcC------
Q 048345 213 DYMKTMR-RSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKG------ 285 (335)
Q Consensus 213 ~~~~~~~-~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~------ 285 (335)
+....++ .+..++.|.=......-+.|||++|| |||.++.-- ..+++.-....+.++..+..++.+.|..
T Consensus 656 eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG--~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll 732 (816)
T 3s28_A 656 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGG--PAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732 (816)
T ss_dssp HHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBT--HHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCC--hHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhc
Confidence 3445566 45677777655556678999999998 788876421 2244444555677888888776666533
Q ss_pred CCHHHHHHHHHHHHHh-hhhceecC
Q 048345 286 VSDDKYLELQMNVVQV-QRHFVLNR 309 (335)
Q Consensus 286 i~~~~~~~m~~~~~~~-~~~f~~~~ 309 (335)
-+++...+|.++.++. .+.|.|..
T Consensus 733 ~d~~~~~~m~~~ar~~a~~~fSwe~ 757 (816)
T 3s28_A 733 EDPSHWDEISKGGLQRIEEKYTWQI 757 (816)
T ss_dssp HCTHHHHHHHHHHHHHHHHSCCHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 1567788888888775 47888863
No 25
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=84.95 E-value=2.4 Score=41.47 Aligned_cols=92 Identities=13% Similarity=0.028 Sum_probs=61.2
Q ss_pred cccHHHhhhcceeEeecCCCCCCChhHHHHHHhCc----eEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcC-
Q 048345 211 GQDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGC----VPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKG- 285 (335)
Q Consensus 211 ~~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~Gc----IPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~- 285 (335)
..+....++.+.-|++|.=.....--..|||++|+ -|||+++.--. .+.++ -++.++..|..++.+.|..
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~--~~~l~---~g~lv~p~d~~~lA~ai~~l 416 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA--ANELT---SALIVNPYDRDEVAAALDRA 416 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG--GGTCT---TSEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC--HHHhC---CeEEECCCCHHHHHHHHHHH
Confidence 45688999999999988654444567999999998 68999874211 12233 3567888888765544433
Q ss_pred --CCHHHHHHHHHHHHHhhhhcee
Q 048345 286 --VSDDKYLELQMNVVQVQRHFVL 307 (335)
Q Consensus 286 --i~~~~~~~m~~~~~~~~~~f~~ 307 (335)
.++++..+|.+++++..+.|.|
T Consensus 417 L~~~~~~r~~~~~~~~~~v~~~s~ 440 (482)
T 1uqt_A 417 LTMSLAERISRHAEMLDVIVKNDI 440 (482)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHTCH
T ss_pred HcCCHHHHHHHHHHHHHHHHhCCH
Confidence 3566666666666654444554
No 26
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=80.11 E-value=2.8 Score=43.11 Aligned_cols=95 Identities=15% Similarity=0.208 Sum_probs=62.7
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCC-CCCCC------cEEEEec---cCC----HH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSD-VLDWS------QFSIQIP---VDK----IL 277 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~-~idw~------~~~v~i~---~~~----~~ 277 (335)
.++.+.++.+...+.|.=..++..-..||+++|+ |||.++.--++ + +.|.. ...+.|+ ..+ +.
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~--d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~ae 586 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFG--SYMEDLIETNQAKDYGIYIVDRRFKAPDESVE 586 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHH--HHHHTTSCHHHHHHTTEEEECCSSSCHHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChh--hhhhccccccCCCCceEEEeCCCCCCHHHHHH
Confidence 3699999999999999766667788999999997 66666641111 1 01111 1223332 222 33
Q ss_pred HHHHHHc---CCCHHHHHHHHHHHHHhhhhceecC
Q 048345 278 EIKTILK---GVSDDKYLELQMNVVQVQRHFVLNR 309 (335)
Q Consensus 278 ~l~~~L~---~i~~~~~~~m~~~~~~~~~~f~~~~ 309 (335)
.|.+.|. ..++++..+|+++.+++.+.|.|..
T Consensus 587 aLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~ 621 (725)
T 3nb0_A 587 QLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKR 621 (725)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 4555544 3467788899999888889999974
No 27
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=72.85 E-value=3.2 Score=39.18 Aligned_cols=64 Identities=13% Similarity=0.221 Sum_probs=45.4
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHH-------HhCceEEEeecccccCCCCCCCCCcEEEE-eccCCHHHHHHHH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAI-------YVGCVPVIISDHYALPFSDVLDWSQFSIQ-IPVDKILEIKTIL 283 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal-------~~GcIPVii~d~~~lPf~~~idw~~~~v~-i~~~~~~~l~~~L 283 (335)
.+..+.++.+..++.|.-......-+.||+ ++|| |||.++. +.+ ....+. ++..+..++.+.|
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~-PVIas~~-------v~~-~~~G~l~v~~~d~~~la~ai 346 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL-PAVCPNA-------VVG-PYKSRFGYTPGNADSVIAAI 346 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC-CEEEEGG-------GTC-SCSSEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC-cEEEehh-------ccc-CcceEEEeCCCCHHHHHHHH
Confidence 357788999999999865555566799999 9996 8999886 222 233445 7788877655554
Q ss_pred c
Q 048345 284 K 284 (335)
Q Consensus 284 ~ 284 (335)
.
T Consensus 347 ~ 347 (406)
T 2hy7_A 347 T 347 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=70.80 E-value=15 Score=34.00 Aligned_cols=94 Identities=18% Similarity=0.265 Sum_probs=61.1
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCC--C-------CCCCCcEEEEeccCCH--HHHHH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFS--D-------VLDWSQFSIQIPVDKI--LEIKT 281 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~--~-------~idw~~~~v~i~~~~~--~~l~~ 281 (335)
+..+.|+.++.+++-.|. .-+.|++.+|. |+|+-+ +|+. + .+--...++.++++++ .+|.+
T Consensus 245 dm~~~l~~aDlvI~raG~----~Tv~E~~a~G~-P~Ilip---~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~ 316 (365)
T 3s2u_A 245 DMAAAYAWADLVICRAGA----LTVSELTAAGL-PAFLVP---LPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAA 316 (365)
T ss_dssp CHHHHHHHCSEEEECCCH----HHHHHHHHHTC-CEEECC--------CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHH
T ss_pred hhhhhhccceEEEecCCc----chHHHHHHhCC-CeEEec---cCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHH
Confidence 467899999999987763 34889999996 877643 1221 1 1234556888888764 34555
Q ss_pred HHcCC--CHHHHHHHHHHHHHhhhhceecCCCCCCCHHHHHHHHH
Q 048345 282 ILKGV--SDDKYLELQMNVVQVQRHFVLNRPAKPFDALHMVLHSV 324 (335)
Q Consensus 282 ~L~~i--~~~~~~~m~~~~~~~~~~f~~~~~~~~~dAf~~~~~~l 324 (335)
.|..+ +++.+.+|.++.+++. ..||-+.|.+.+
T Consensus 317 ~i~~ll~d~~~~~~m~~~a~~~~----------~~~aa~~ia~~i 351 (365)
T 3s2u_A 317 QLSEVLMHPETLRSMADQARSLA----------KPEATRTVVDAC 351 (365)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHTC----------CTTHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHhcC----------CccHHHHHHHHH
Confidence 55543 4678888888877652 236666666554
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=68.71 E-value=7.1 Score=35.65 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=44.5
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHHH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDDK 290 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~~ 290 (335)
+..+.|+.|...+.|.| .. +.||+++|+ |||+.+... -..++++ ....+.++ .+..+|.+.+..+ +++.
T Consensus 267 ~~~~~~~~ad~~v~~S~----g~-~lEA~a~G~-PvI~~~~~~-~~~~~~~-~g~g~lv~-~d~~~la~~i~~ll~d~~~ 337 (376)
T 1v4v_A 267 SMAALMRASLLLVTDSG----GL-QEEGAALGV-PVVVLRNVT-ERPEGLK-AGILKLAG-TDPEGVYRVVKGLLENPEE 337 (376)
T ss_dssp HHHHHHHTEEEEEESCH----HH-HHHHHHTTC-CEEECSSSC-SCHHHHH-HTSEEECC-SCHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHhCcEEEECCc----CH-HHHHHHcCC-CEEeccCCC-cchhhhc-CCceEECC-CCHHHHHHHHHHHHhChHh
Confidence 56788999998888752 22 779999997 888765321 0112232 12345554 3666665555443 4555
Q ss_pred HHHHHH
Q 048345 291 YLELQM 296 (335)
Q Consensus 291 ~~~m~~ 296 (335)
..+|.+
T Consensus 338 ~~~~~~ 343 (376)
T 1v4v_A 338 LSRMRK 343 (376)
T ss_dssp HHHHHH
T ss_pred hhhhcc
Confidence 666654
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=68.23 E-value=9.1 Score=35.98 Aligned_cols=93 Identities=17% Similarity=0.190 Sum_probs=55.1
Q ss_pred ccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeeccc-ccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CH
Q 048345 212 QDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHY-ALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SD 288 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~-~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~ 288 (335)
.++...|+.|...+.+.| +. ..||+.+|+ |||+.++. ..| +.++-. ..+.++. +..+|.+.++.+ ++
T Consensus 299 ~~~~~l~~~ad~vv~~SG-g~----~~EA~a~G~-PvV~~~~~~~~~--e~v~~G-~~~lv~~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDSG-GI----QEEAPSLGK-PVLVMRETTERP--EAVAAG-TVKLVGT-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHHHHCSEEEESCS-GG----GTTGGGGTC-CEEECCSSCSCH--HHHHHT-SEEECTT-CHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHhcCEEEECCc-cH----HHHHHHcCC-CEEEccCCCcch--HHHHcC-ceEEcCC-CHHHHHHHHHHHHcCH
Confidence 367799999999988876 21 279999995 99987432 112 233222 3455554 555555554443 34
Q ss_pred HHHHHHHHHHHHhhhhceecCCCCCCCHHHHHHHHH
Q 048345 289 DKYLELQMNVVQVQRHFVLNRPAKPFDALHMVLHSV 324 (335)
Q Consensus 289 ~~~~~m~~~~~~~~~~f~~~~~~~~~dAf~~~~~~l 324 (335)
+...+|.++. .+-+.++|-+.|+..|
T Consensus 369 ~~~~~m~~~~----------~~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 369 QAYQAMSQAH----------NPYGDGKACQRIADIL 394 (396)
T ss_dssp HHHHHHHTSC----------CTTCCSCHHHHHHHHH
T ss_pred HHHHHHhhcc----------CCCcCChHHHHHHHHH
Confidence 4555554421 1235568888887655
No 31
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=67.83 E-value=24 Score=28.15 Aligned_cols=84 Identities=18% Similarity=0.285 Sum_probs=48.6
Q ss_pred HHHhh--hcceeEeecCCCCCCChhHHHHHHhCceEEEeeccc-ccCC-CCCCCCCcEEEEeccC--CHHHHHHHHcCCC
Q 048345 214 YMKTM--RRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHY-ALPF-SDVLDWSQFSIQIPVD--KILEIKTILKGVS 287 (335)
Q Consensus 214 ~~~~~--~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~-~lPf-~~~idw~~~~v~i~~~--~~~~l~~~L~~i~ 287 (335)
..+.| ..++..++..|. .-+.||+.+| +|+|+.+.. +.+. ...+......+.++.. +..+|.+.|+.+-
T Consensus 78 ~~~~l~~~~ad~~I~~~G~----~t~~Ea~~~G-~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 78 QNDLLGHPKTRAFITHGGA----NGIYEAIYHG-IPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp HHHHHTSTTEEEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCcCEEEEcCCc----cHHHHHHHcC-CCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHH
Confidence 35666 778888887663 4599999999 588887542 0100 1123335677778765 4455655555431
Q ss_pred HHHHHHHHHHHHHhhhh
Q 048345 288 DDKYLELQMNVVQVQRH 304 (335)
Q Consensus 288 ~~~~~~m~~~~~~~~~~ 304 (335)
.. .+|+++.+++.+.
T Consensus 153 ~~--~~~~~~a~~~~~~ 167 (170)
T 2o6l_A 153 ND--PSYKENVMKLSRI 167 (170)
T ss_dssp HC--HHHHHHHHHHC--
T ss_pred cC--HHHHHHHHHHHHH
Confidence 11 1366666666544
No 32
>2ygg_A Sodium/hydrogen exchanger 1; metal binding protein-transport protein complex; HET: TAM; 2.23A {Homo sapiens}
Probab=61.02 E-value=12 Score=26.54 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHHH----Hhhh-hceecCCCCCCCHHHHHHHHHHHHhhcc
Q 048345 286 VSDDKYLELQMNVV----QVQR-HFVLNRPAKPFDALHMVLHSVWLRRLNV 331 (335)
Q Consensus 286 i~~~~~~~m~~~~~----~~~~-~f~~~~~~~~~dAf~~~~~~l~~r~~~~ 331 (335)
+++++.++||+-|. ++++ .-.|+.-.-+.|+.+--+.|+.+|++..
T Consensus 4 ls~~~~e~ir~IL~~NLykiRqr~~SYnRHtL~~d~~e~q~~EiLiRr~~s 54 (70)
T 2ygg_A 4 LSKDKEEEIRKILRNNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKA 54 (70)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhccccccccCCCCchHHHHHHHHHHHHhh
Confidence 55666666665444 4444 4668877888899999999999999864
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=55.45 E-value=17 Score=34.19 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=53.8
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcCC--CHHH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKGV--SDDK 290 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~i--~~~~ 290 (335)
++...|+.|.+.+.+.|. . ..||+.+| +|||+.++.- -.++.++ ....+.++. +..+|.+.+..+ +++.
T Consensus 294 ~~~~l~~~ad~vv~~SGg----~-~~EA~a~g-~PvV~~~~~~-~~~e~v~-~g~~~lv~~-d~~~l~~ai~~ll~~~~~ 364 (403)
T 3ot5_A 294 DFHNFLRKSYLVFTDSGG----V-QEEAPGMG-VPVLVLRDTT-ERPEGIE-AGTLKLIGT-NKENLIKEALDLLDNKES 364 (403)
T ss_dssp HHHHHHHHEEEEEECCHH----H-HHHGGGTT-CCEEECCSSC-SCHHHHH-HTSEEECCS-CHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHhcCEEEECCcc----H-HHHHHHhC-CCEEEecCCC-cchhhee-CCcEEEcCC-CHHHHHHHHHHHHcCHHH
Confidence 688999999988876541 1 26999998 4999874321 0112232 223444543 555555554443 4555
Q ss_pred HHHHHHHHHHhhhhceecCCCCCCCHHHHHHHHHH
Q 048345 291 YLELQMNVVQVQRHFVLNRPAKPFDALHMVLHSVW 325 (335)
Q Consensus 291 ~~~m~~~~~~~~~~f~~~~~~~~~dAf~~~~~~l~ 325 (335)
..+|.++ . .+-+.++|-+.|+..|.
T Consensus 365 ~~~m~~~----~------~~~g~~~aa~rI~~~l~ 389 (403)
T 3ot5_A 365 HDKMAQA----A------NPYGDGFAANRILAAIK 389 (403)
T ss_dssp HHHHHHS----C------CTTCCSCHHHHHHHHHH
T ss_pred HHHHHhh----c------CcccCCcHHHHHHHHHH
Confidence 5555432 1 12245688888877663
No 34
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=46.71 E-value=5.5 Score=36.84 Aligned_cols=86 Identities=7% Similarity=-0.007 Sum_probs=50.9
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeeccc-ccCC-CCCCCCCcEEEEeccC--CHHHHHHHHcCC--
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHY-ALPF-SDVLDWSQFSIQIPVD--KILEIKTILKGV-- 286 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~-~lPf-~~~idw~~~~v~i~~~--~~~~l~~~L~~i-- 286 (335)
+..+.|+.++..++..|. .-+.||+.+|+ |||+.+.. ..+. .+.+.-....+.++.. +..+|.+.|+.+
T Consensus 301 ~~~~~l~~ad~~v~~~g~----~t~~Ea~a~G~-P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~ 375 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGS----GTTLGALGAGV-PQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA 375 (412)
T ss_dssp CHHHHGGGCSEEEESCCH----HHHHHHHHHTC-CEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH
T ss_pred CHHHHHhcCcEEEECCch----HHHHHHHHhCC-CEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh
Confidence 578899999988888763 34899999995 88885321 0000 0112223456677665 555565555543
Q ss_pred CHHHHHHHHHHHHHhhh
Q 048345 287 SDDKYLELQMNVVQVQR 303 (335)
Q Consensus 287 ~~~~~~~m~~~~~~~~~ 303 (335)
+++...+|.+..+.+..
T Consensus 376 ~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 376 EESYRAGARAVAAEIAA 392 (412)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 34555555555555443
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=45.14 E-value=21 Score=32.88 Aligned_cols=82 Identities=9% Similarity=0.085 Sum_probs=44.8
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeeccc-ccCC-CCCCCCCcEEEEeccCC--HHH----HHHHHc
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHY-ALPF-SDVLDWSQFSIQIPVDK--ILE----IKTILK 284 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~-~lPf-~~~idw~~~~v~i~~~~--~~~----l~~~L~ 284 (335)
...+.|..++.+++..|. .-+.||+.+|+ |||+.... ..+. .+.+......+.++.++ ..+ |.++|.
T Consensus 293 ~~~~ll~~ad~~v~~gG~----~t~~Ea~~~G~-P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~ 367 (398)
T 4fzr_A 293 PLSAIMPACDVVVHHGGH----GTTLTCLSEGV-PQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRD 367 (398)
T ss_dssp CHHHHGGGCSEEEECCCH----HHHHHHHHTTC-CEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHH
T ss_pred CHHHHHhhCCEEEecCCH----HHHHHHHHhCC-CEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh
Confidence 578899999999987773 34899999995 88884321 1110 01233345666676542 233 444444
Q ss_pred CCCHHHHHHHHHHHHHh
Q 048345 285 GVSDDKYLELQMNVVQV 301 (335)
Q Consensus 285 ~i~~~~~~~m~~~~~~~ 301 (335)
+++...+|++..+.+
T Consensus 368 --~~~~~~~~~~~~~~~ 382 (398)
T 4fzr_A 368 --DSSYVGNARRLAAEM 382 (398)
T ss_dssp --CTHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHH
Confidence 234445555544443
No 36
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=38.33 E-value=1.2e+02 Score=30.60 Aligned_cols=121 Identities=13% Similarity=0.201 Sum_probs=67.2
Q ss_pred CeEEeecccCcccHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecccccC--CC----CCCCCCcEEEEeccC
Q 048345 201 EIQVHEYLPKGQDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHYALP--FS----DVLDWSQFSIQIPVD 274 (335)
Q Consensus 201 ~v~~~~~~~~~~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lP--f~----~~idw~~~~v~i~~~ 274 (335)
.+.+.+..+ ..+|.+.++.+.-+|-|--.+. ..-..|||.+| +|||...+-.+. .. .-+.-.++.|.-.++
T Consensus 500 Rv~F~g~~p-~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmG-VPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~d~e 576 (631)
T 3q3e_A 500 SATAHPHSP-YHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLG-LVGVCKTGAEVHEHIDEGLFKRLGLPEWLIANTVD 576 (631)
T ss_dssp GEEEECCCC-HHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTT-CCEEEECCSSHHHHHHHHHHHHTTCCGGGEESSHH
T ss_pred cEEEcCCCC-HHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcC-CCEEeccCCcHHHHhHHHHHHhcCCCcceecCCHH
Confidence 344433322 4578889999999998765433 46799999999 699886431000 00 000111111111222
Q ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHhh-hhceecCCCCCCCHHHHHHHHHHHHh
Q 048345 275 KILEIKTILKGVSDDKYLELQMNVVQVQ-RHFVLNRPAKPFDALHMVLHSVWLRR 328 (335)
Q Consensus 275 ~~~~l~~~L~~i~~~~~~~m~~~~~~~~-~~f~~~~~~~~~dAf~~~~~~l~~r~ 328 (335)
+..++.-.|.+ +.+.+.+||++++.-. ..-.|+ +....|...++++|.+-
T Consensus 577 eYv~~Av~La~-D~~~l~~LR~~Lr~~~~~spLFd---~~~~~~e~~ye~~~~~w 627 (631)
T 3q3e_A 577 EYVERAVRLAE-NHQERLELRRYIIENNGLNTLFT---GDPRPMGQVFLEKLNAF 627 (631)
T ss_dssp HHHHHHHHHHH-CHHHHHHHHHHHHHSCCHHHHTC---SCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CHHHHHHHHHHHHHHhhhCCCcc---hhHHHHHHHHHHHHHHH
Confidence 22232222222 5778899999998753 223333 34477788888777653
No 37
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=35.49 E-value=2.5e+02 Score=25.31 Aligned_cols=83 Identities=8% Similarity=0.083 Sum_probs=49.1
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeecc-cccCC-C--CCCCCCcEEEEeccC--CHHHHHHHHcCC
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDH-YALPF-S--DVLDWSQFSIQIPVD--KILEIKTILKGV 286 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~-~~lPf-~--~~idw~~~~v~i~~~--~~~~l~~~L~~i 286 (335)
+..+.|..++-.++..|. .-+.||+.+|+ |||+-.. ...+. . +.+......+.++.. +...|.++|.
T Consensus 292 ~~~~ll~~ad~~v~~~G~----~t~~Eal~~G~-P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~-- 364 (398)
T 3oti_A 292 PLHTLLRTCTAVVHHGGG----GTVMTAIDAGI-PQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIG-- 364 (398)
T ss_dssp CHHHHHTTCSEEEECCCH----HHHHHHHHHTC-CEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHHHHHH--
T ss_pred CHHHHHhhCCEEEECCCH----HHHHHHHHhCC-CEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHc--
Confidence 577889999988877664 24899999995 8887432 11111 1 112223467777765 3455666665
Q ss_pred CHHHHHHHHHHHHHhh
Q 048345 287 SDDKYLELQMNVVQVQ 302 (335)
Q Consensus 287 ~~~~~~~m~~~~~~~~ 302 (335)
+++...+|++..+.+.
T Consensus 365 ~~~~~~~~~~~~~~~~ 380 (398)
T 3oti_A 365 DESLRTAAREVREEMV 380 (398)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 3444455555444443
No 38
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=34.41 E-value=27 Score=32.34 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=29.2
Q ss_pred ccHHHhhhcceeEeecCCCC-CCChhHHHHHHhCceEEEeecc
Q 048345 212 QDYMKTMRRSKFCLCPSGFE-VASPRLVEAIYVGCVPVIISDH 253 (335)
Q Consensus 212 ~~~~~~~~~S~Fcl~p~G~~-~~s~rl~dal~~GcIPVii~d~ 253 (335)
.+..+.|+.|..+++|.... ....-+.||+++|| |||.+++
T Consensus 269 ~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~-PVI~~~~ 310 (374)
T 2xci_A 269 GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGI-PVIYGPY 310 (374)
T ss_dssp SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTC-CEEECSC
T ss_pred HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCC-CEEECCC
Confidence 46788999999877765331 22345999999997 7887643
No 39
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=30.02 E-value=34 Score=21.51 Aligned_cols=14 Identities=7% Similarity=0.219 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHhh
Q 048345 289 DKYLELQMNVVQVQ 302 (335)
Q Consensus 289 ~~~~~m~~~~~~~~ 302 (335)
+++.+||.+|..++
T Consensus 26 edi~~MqsRLaALR 39 (40)
T 2xze_Q 26 EALEAMQSRLATLR 39 (40)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 57899999998775
No 40
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=29.30 E-value=1.4e+02 Score=27.36 Aligned_cols=86 Identities=8% Similarity=0.075 Sum_probs=50.6
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeeccc-ccCC-CCCCCCCcEEEEeccCC--HHHHHHHHcCCCH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHY-ALPF-SDVLDWSQFSIQIPVDK--ILEIKTILKGVSD 288 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~-~lPf-~~~idw~~~~v~i~~~~--~~~l~~~L~~i~~ 288 (335)
...+.|.+++..++-.|.+ -+.||+.+| +|+|+-... +.++ ...+......+.++..+ ..+|.+.++.+-.
T Consensus 277 ~~~~ll~~~d~~v~~gG~~----t~~Eal~~G-vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 277 NHQVLFGRVAAVVHHGGAG----TTTAVTRAG-APQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT 351 (404)
T ss_dssp CHHHHGGGSSEEEECCCHH----HHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS
T ss_pred CHHHHHhhCcEEEECCcHH----HHHHHHHcC-CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC
Confidence 4678999999999888753 378999999 688775320 0010 01133455667776543 3456555555322
Q ss_pred HHHHHHHHHHHHhhhhce
Q 048345 289 DKYLELQMNVVQVQRHFV 306 (335)
Q Consensus 289 ~~~~~m~~~~~~~~~~f~ 306 (335)
.+++++.+++.+.+.
T Consensus 352 ---~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 352 ---PGIRARAAAVAGTIR 366 (404)
T ss_dssp ---HHHHHHHHHHHTTCC
T ss_pred ---HHHHHHHHHHHHHHh
Confidence 235556666655443
No 41
>4dx8_H KREV interaction trapped protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens}
Probab=25.37 E-value=28 Score=29.27 Aligned_cols=26 Identities=35% Similarity=0.446 Sum_probs=13.0
Q ss_pred CCCCccEEEeeecccceeeeeccCCc
Q 048345 48 HPDEAHAFFVPISVTYIVEYVYRPIT 73 (335)
Q Consensus 48 dPeeAdlF~VP~~~~~~~~~~~~p~~ 73 (335)
-++||-||+||+.......+.|.|..
T Consensus 109 ~g~eA~LfvVP~~vKdntk~~~~pg~ 134 (203)
T 4dx8_H 109 MGREASLFIVPSVVKDNTKYTYTPGC 134 (203)
T ss_dssp SSCEEEEEEEECCC-----------C
T ss_pred CCcceeEEEEeeeecCCCCCCCCCCC
Confidence 57899999999988764445555443
No 42
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=23.79 E-value=24 Score=33.16 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=42.3
Q ss_pred HHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeeccc-ccCC-CCCCCCCcEEEEeccC--CHHHHHHHHcCC
Q 048345 214 YMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHY-ALPF-SDVLDWSQFSIQIPVD--KILEIKTILKGV 286 (335)
Q Consensus 214 ~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~-~lPf-~~~idw~~~~v~i~~~--~~~~l~~~L~~i 286 (335)
..+.|..+...++..|. .-+.||+.+| +|+|+.+.. +.++ .+.+......+.++.+ +..+|.+.|+.+
T Consensus 329 ~~~ll~~ad~~V~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 329 MHALLPTCAATVHHGGP----GSWHTAAIHG-VPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRV 400 (441)
T ss_dssp HHHHGGGCSEEEECCCH----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEECCCH----HHHHHHHHhC-CCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHH
Confidence 46789999999987663 3489999999 588776531 1111 1123344567777765 345565555544
No 43
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=23.52 E-value=1e+02 Score=30.05 Aligned_cols=86 Identities=15% Similarity=0.173 Sum_probs=52.7
Q ss_pred cccHHHhhhcceeEeecCCCCCCChhHHHHHHhC--ceEEEeecccccCCCCCCCCCcEEEEeccCCHHHHHHHHcC---
Q 048345 211 GQDYMKTMRRSKFCLCPSGFEVASPRLVEAIYVG--CVPVIISDHYALPFSDVLDWSQFSIQIPVDKILEIKTILKG--- 285 (335)
Q Consensus 211 ~~~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~G--cIPVii~d~~~lPf~~~idw~~~~v~i~~~~~~~l~~~L~~--- 285 (335)
..+....++.|.-|++|.=.....--..|||++| .-|||+++---. .+.+ .+-++.|+..|..++.+.|..
T Consensus 362 ~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa--~~~l--~~~allVnP~D~~~lA~AI~~aL~ 437 (496)
T 3t5t_A 362 VNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA--AEVL--GEYCRSVNPFDLVEQAEAISAALA 437 (496)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT--HHHH--GGGSEEECTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC--HHHh--CCCEEEECCCCHHHHHHHHHHHHc
Confidence 3467889999999999864433345588999986 347777763110 0111 123678888888876555443
Q ss_pred CCHHHHHHHHHHHHH
Q 048345 286 VSDDKYLELQMNVVQ 300 (335)
Q Consensus 286 i~~~~~~~m~~~~~~ 300 (335)
+++++..++.+++.+
T Consensus 438 m~~~er~~r~~~~~~ 452 (496)
T 3t5t_A 438 AGPRQRAEAAARRRD 452 (496)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 465555555554544
No 44
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=22.69 E-value=56 Score=30.22 Aligned_cols=85 Identities=12% Similarity=0.066 Sum_probs=51.4
Q ss_pred cHHHhhhcceeEeecCCCCCCChhHHHHHHhCceEEEeeccc-ccCC-CCCCCCCcEEEEeccC--CHHHHHHHHcCCCH
Q 048345 213 DYMKTMRRSKFCLCPSGFEVASPRLVEAIYVGCVPVIISDHY-ALPF-SDVLDWSQFSIQIPVD--KILEIKTILKGVSD 288 (335)
Q Consensus 213 ~~~~~~~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~-~lPf-~~~idw~~~~v~i~~~--~~~~l~~~L~~i~~ 288 (335)
...+.|.+++..++..|. .-+.||+.+| +|+|+-+.. +.++ ...+......+.++.+ +..+|.+.++.+ .
T Consensus 294 ~~~~~l~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~ 367 (415)
T 1iir_A 294 NHQVLFGRVAAVIHHGGA----GTTHVAARAG-APQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-L 367 (415)
T ss_dssp CHHHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-T
T ss_pred ChHHHHhhCCEEEeCCCh----hHHHHHHHcC-CCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-c
Confidence 346788999999987764 4599999999 588775431 0110 0123344567777654 345677777666 2
Q ss_pred HHHHHHHHHHHHhhhhc
Q 048345 289 DKYLELQMNVVQVQRHF 305 (335)
Q Consensus 289 ~~~~~m~~~~~~~~~~f 305 (335)
+ .+++++.++..+.+
T Consensus 368 ~--~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 368 T--PETHARATAVAGTI 382 (415)
T ss_dssp S--HHHHHHHHHHHHHS
T ss_pred C--HHHHHHHHHHHHHH
Confidence 2 24555555555544
No 45
>2q2k_A Hypothetical protein; protein-DNA, partition, segregation, PARB, DNA binding protein/DNA complex; HET: DNA 5IU EPE; 3.00A {Staphylococcus aureus}
Probab=20.06 E-value=1.4e+02 Score=19.93 Aligned_cols=39 Identities=13% Similarity=0.180 Sum_probs=29.8
Q ss_pred CcEEEEeccCCHHHHHHHHcCCCHH-HHHHHHHHHHHhhh
Q 048345 265 SQFSIQIPVDKILEIKTILKGVSDD-KYLELQMNVVQVQR 303 (335)
Q Consensus 265 ~~~~v~i~~~~~~~l~~~L~~i~~~-~~~~m~~~~~~~~~ 303 (335)
.+-.+.|...|.++|-+.|++++.. .-+.+|+.+++..+
T Consensus 25 tkhllkikkedypqifdflenvprgtktahirealrryie 64 (70)
T 2q2k_A 25 TKHLLKIKKEDYPQIFDFLENVPRGTKTAHIREALRRYIE 64 (70)
T ss_dssp EEEEEEEETTTSHHHHHHHTTSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhchHHHHHHHcCCCccchHHHHHHHHHHHH
Confidence 3556788899999999999999853 55666777776544
Done!