Query 048349
Match_columns 94
No_of_seqs 121 out of 582
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 15:03:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.4 5.3E-13 1.8E-17 79.4 7.8 67 2-71 1-67 (68)
2 1cc8_A Protein (metallochapero 99.4 1.6E-12 5.4E-17 77.6 9.5 69 1-71 3-72 (73)
3 2crl_A Copper chaperone for su 99.2 1.4E-10 4.9E-15 74.2 10.0 72 2-75 18-89 (98)
4 4a4j_A Pacszia, cation-transpo 99.1 4.9E-10 1.7E-14 65.5 9.0 64 2-68 1-68 (69)
5 3dxs_X Copper-transporting ATP 99.0 1.4E-09 4.8E-14 64.4 8.2 68 2-70 1-71 (74)
6 3fry_A Probable copper-exporti 99.0 1E-09 3.5E-14 65.6 7.6 66 1-71 3-70 (73)
7 2xmw_A PACS-N, cation-transpor 99.0 8.9E-09 3E-13 58.9 9.3 62 1-64 1-64 (71)
8 2roe_A Heavy metal binding pro 98.9 7.8E-09 2.7E-13 59.4 6.6 59 6-67 3-63 (66)
9 1qup_A Superoxide dismutase 1 98.8 2.3E-08 7.8E-13 73.3 9.2 70 3-74 6-75 (222)
10 2xmm_A SSR2857 protein, ATX1; 98.8 1.3E-08 4.5E-13 57.1 5.7 55 5-61 3-58 (64)
11 2l3m_A Copper-ION-binding prot 98.7 1.2E-07 4.2E-12 54.3 8.6 61 2-64 4-67 (71)
12 2aj0_A Probable cadmium-transp 98.7 6E-08 2.1E-12 56.4 7.0 49 1-51 1-50 (71)
13 1fvq_A Copper-transporting ATP 98.7 1.9E-07 6.4E-12 53.5 8.9 66 4-70 3-70 (72)
14 1jk9_B CCS, copper chaperone f 98.7 8.4E-08 2.9E-12 71.5 9.0 70 3-74 7-76 (249)
15 1aw0_A Menkes copper-transport 98.6 1.8E-07 6E-12 53.6 7.5 61 2-64 2-65 (72)
16 3cjk_B Copper-transporting ATP 98.6 5.4E-07 1.8E-11 52.3 9.4 67 2-70 1-71 (75)
17 2qif_A Copper chaperone COPZ; 98.6 4.2E-07 1.5E-11 50.7 8.6 60 3-64 2-64 (69)
18 1osd_A MERP, hypothetical prot 98.6 2.2E-07 7.7E-12 53.1 7.6 63 3-67 3-69 (72)
19 2k2p_A Uncharacterized protein 98.6 5.6E-08 1.9E-12 60.4 5.2 57 3-61 22-79 (85)
20 2g9o_A Copper-transporting ATP 98.6 2.4E-07 8.4E-12 57.3 7.8 58 4-62 4-64 (90)
21 1y3j_A Copper-transporting ATP 98.6 4.8E-07 1.6E-11 53.1 8.3 68 2-70 2-72 (77)
22 1mwy_A ZNTA; open-faced beta-s 98.6 8.5E-07 2.9E-11 51.5 9.0 60 3-64 3-63 (73)
23 1yjr_A Copper-transporting ATP 98.5 6.4E-07 2.2E-11 51.6 7.6 64 3-67 4-70 (75)
24 1opz_A Potential copper-transp 98.5 8.8E-07 3E-11 50.8 7.7 60 3-64 6-68 (76)
25 1yg0_A COP associated protein; 98.5 6.3E-07 2.1E-11 50.3 6.8 56 5-61 3-60 (66)
26 1p6t_A Potential copper-transp 98.5 8E-07 2.7E-11 58.2 8.0 69 3-72 74-145 (151)
27 1kvi_A Copper-transporting ATP 98.4 6.1E-07 2.1E-11 52.7 6.4 66 3-69 8-76 (79)
28 1jww_A Potential copper-transp 98.4 1.9E-06 6.5E-11 50.2 8.4 65 3-69 3-71 (80)
29 1q8l_A Copper-transporting ATP 98.4 1.1E-06 3.8E-11 52.9 7.4 65 3-69 9-77 (84)
30 1cpz_A Protein (COPZ); copper 98.4 1.1E-06 3.8E-11 49.5 6.8 61 6-68 3-67 (68)
31 2ldi_A Zinc-transporting ATPas 98.4 1.9E-06 6.5E-11 48.5 7.6 60 3-64 3-65 (71)
32 2kyz_A Heavy metal binding pro 98.4 5.2E-07 1.8E-11 51.9 4.3 55 5-64 3-58 (67)
33 2ofg_X Zinc-transporting ATPas 98.3 2.9E-06 1E-10 54.5 8.0 60 3-64 8-70 (111)
34 2kkh_A Putative heavy metal tr 98.3 4.9E-06 1.7E-10 51.3 7.8 67 3-71 16-86 (95)
35 2ew9_A Copper-transporting ATP 98.3 3.2E-06 1.1E-10 54.9 6.9 64 3-68 80-147 (149)
36 2kt2_A Mercuric reductase; nme 98.2 2.6E-06 9E-11 48.4 5.7 57 6-64 3-61 (69)
37 2rop_A Copper-transporting ATP 98.2 7.6E-06 2.6E-10 56.9 8.6 69 3-72 122-193 (202)
38 2ew9_A Copper-transporting ATP 98.2 5.8E-06 2E-10 53.7 7.5 68 1-69 2-72 (149)
39 2rop_A Copper-transporting ATP 97.9 4.1E-05 1.4E-09 53.1 7.1 59 3-62 20-81 (202)
40 1p6t_A Potential copper-transp 97.8 0.00014 4.7E-09 47.3 7.9 59 2-61 5-66 (151)
41 3j09_A COPA, copper-exporting 97.3 0.00084 2.9E-08 55.8 7.9 62 4-66 3-67 (723)
42 3bpd_A Uncharacterized protein 91.4 0.35 1.2E-05 31.8 4.7 48 17-64 21-74 (100)
43 2x3d_A SSO6206; unknown functi 87.9 0.84 2.9E-05 29.8 4.4 46 19-64 22-73 (96)
44 2jsx_A Protein NAPD; TAT, proo 87.5 3.9 0.00013 25.9 8.6 46 15-61 17-62 (95)
45 2raq_A Conserved protein MTH88 87.5 0.78 2.7E-05 30.0 4.1 46 19-64 23-74 (97)
46 2jsx_A Protein NAPD; TAT, proo 77.5 4.9 0.00017 25.4 4.9 34 4-37 43-76 (95)
47 3cq1_A Putative uncharacterize 71.6 4.7 0.00016 25.2 3.7 34 4-37 42-81 (103)
48 2cpq_A FragIle X mental retard 69.8 12 0.00041 23.6 5.3 39 18-59 34-72 (91)
49 1uwd_A Hypothetical protein TM 65.9 7.2 0.00025 24.3 3.6 34 4-37 43-82 (103)
50 3lno_A Putative uncharacterize 54.6 8.2 0.00028 24.4 2.4 34 4-37 45-85 (108)
51 2ko1_A CTR148A, GTP pyrophosph 51.5 32 0.0011 19.6 4.8 28 7-34 49-76 (88)
52 2k1h_A Uncharacterized protein 51.2 30 0.001 21.8 4.7 40 20-62 41-81 (94)
53 2qip_A Protein of unknown func 46.2 20 0.00068 23.9 3.4 30 42-72 112-142 (165)
54 3hrg_A Uncharacterized protein 38.1 43 0.0015 24.2 4.4 38 34-72 208-245 (257)
55 3g74_A Protein of unknown func 37.5 29 0.00099 22.1 3.0 25 50-74 60-84 (100)
56 3j1z_P YIIP, cation efflux fam 35.3 34 0.0012 25.1 3.5 18 16-33 216-233 (306)
57 2yy3_A Elongation factor 1-bet 34.6 48 0.0017 20.8 3.7 33 5-37 53-87 (91)
58 1vbk_A Hypothetical protein PH 32.7 1E+02 0.0034 22.7 5.7 43 16-64 26-70 (307)
59 1pqx_A Conserved hypothetical 32.6 30 0.001 21.8 2.4 41 20-63 41-82 (91)
60 3mgj_A Uncharacterized protein 31.9 63 0.0022 21.4 4.0 58 2-61 3-70 (118)
61 3q9p_A Heat shock protein beta 31.3 22 0.00075 21.3 1.6 23 25-48 13-37 (85)
62 3ami_A Zinc peptidase; alpha/b 31.0 32 0.0011 25.3 2.7 24 40-64 189-212 (445)
63 3cnq_P Subtilisin BPN'; unclea 30.6 44 0.0015 19.3 2.8 19 19-37 53-71 (80)
64 2kgs_A Uncharacterized protein 30.1 86 0.0029 20.3 4.5 32 18-54 67-98 (132)
65 2z30_B TK-subtilisin; thermoco 27.8 74 0.0025 18.0 3.5 17 21-37 44-60 (65)
66 2kl8_A OR15; structural genomi 26.5 1.1E+02 0.0039 18.6 5.7 39 17-59 19-57 (85)
67 3eoq_A Putative zinc protease; 25.3 45 0.0015 24.2 2.6 25 39-64 181-205 (406)
68 3amj_B Zinc peptidase inactive 25.2 66 0.0023 23.2 3.5 25 39-64 188-212 (424)
69 2khp_A Glutaredoxin; thioredox 24.7 80 0.0027 17.8 3.3 35 1-37 4-38 (92)
70 2wj5_A Heat shock protein beta 24.6 22 0.00075 22.0 0.7 23 25-48 17-41 (101)
71 3go9_A Insulinase family prote 24.1 47 0.0016 25.4 2.6 24 40-64 211-234 (492)
72 2c5s_A THII, probable thiamine 24.0 2.1E+02 0.0072 21.7 6.3 45 16-64 37-81 (413)
73 2y1y_A Alpha-crystallin B chai 23.6 24 0.00081 21.2 0.7 23 25-48 12-36 (90)
74 1gh8_A Translation elongation 23.3 1.2E+02 0.004 18.9 4.0 32 6-37 52-84 (89)
75 3gzb_A Putative snoal-like pol 22.9 64 0.0022 22.3 2.8 35 25-60 118-152 (154)
76 1hr6_B Beta-MPP, mitochondrial 22.5 54 0.0019 23.8 2.6 24 40-64 188-211 (443)
77 1pp9_A Ubiquinol-cytochrome C 21.5 58 0.002 23.9 2.6 24 40-64 194-217 (446)
78 2g2k_A EIF-5, eukaryotic trans 21.5 1.1E+02 0.0037 21.4 3.9 28 34-63 66-93 (170)
79 2ctf_A Vigilin; K homology typ 21.5 1.1E+02 0.0037 19.0 3.6 41 19-61 48-88 (102)
80 1dtj_A RNA-binding neurooncolo 20.7 1.3E+02 0.0043 17.0 4.2 52 1-54 1-63 (76)
81 1t1v_A SH3BGRL3, SH3 domain-bi 20.4 87 0.003 18.1 2.8 33 4-37 3-40 (93)
82 2a7w_A PRA-PH, phosphoribosyl- 20.2 57 0.002 21.5 2.1 17 49-65 79-95 (116)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.44 E-value=5.3e-13 Score=79.42 Aligned_cols=67 Identities=7% Similarity=0.135 Sum_probs=60.7
Q ss_pred ceeEEEEEeCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcCceEEEec
Q 048349 2 KRMVGIEQPLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLRYATFIAS 71 (94)
Q Consensus 2 ~q~vVlKV~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~~aeivsv 71 (94)
+++..|+|.|+|.+|.+++.+++.+++|| ++.+|. ..++++|.|+ +++..|.+.|++.+-.+++|++
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~-~~~~~~v~~~-~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDL-PNKKVCIESE-HSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEET-TTTEEEEEES-SCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEc-CCCEEEEEec-CCHHHHHHHHHHcCCceEecCC
Confidence 35678889999999999999999999999 999998 9999999998 9999999999984448999886
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.43 E-value=1.6e-12 Score=77.61 Aligned_cols=69 Identities=6% Similarity=0.044 Sum_probs=62.1
Q ss_pred CceeEEEEEeCcchhhHHHHHHHhcCCC-CeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcCceEEEec
Q 048349 1 MKRMVGIEQPLENDKSRSKALKIVGGMP-GVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLRYATFIAS 71 (94)
Q Consensus 1 M~q~vVlKV~m~c~~C~~K~~k~i~~~~-GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~~aeivsv 71 (94)
|++++.|+|+|+|++|.+++.+++.+++ ||.++.+|. ..++++|.+. +++..+.+.|++.+-.+++|++
T Consensus 3 ~m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~~Gy~~~~~~~ 72 (73)
T 1cc8_A 3 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISL-EKQLVDVYTT-LPYDFILEKIKKTGKEVRSGKQ 72 (73)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEET-TTTEEEEEES-SCHHHHHHHHHTTSSCEEEEEE
T ss_pred CceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEEC-CCCEEEEEEe-CCHHHHHHHHHHhCCCceeeec
Confidence 4688999999999999999999999999 999999998 9999999997 9999999999984337777753
No 3
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=1.4e-10 Score=74.21 Aligned_cols=72 Identities=13% Similarity=0.078 Sum_probs=63.9
Q ss_pred ceeEEEEEeCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcCceEEEeccCCc
Q 048349 2 KRMVGIEQPLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLRYATFIASKLRR 75 (94)
Q Consensus 2 ~q~vVlKV~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~~aeivsv~p~k 75 (94)
.+++.|+|.|+|..|..++.+++.+++||.++.+|. ..++++|.+. +++..|.+.|++..-.+.++..+++.
T Consensus 18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl-~~~~~~V~~~-~~~~~i~~~i~~~Gy~~~~~~~~~~~ 89 (98)
T 2crl_A 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHL-EDQMVLVHTT-LPSQEVQALLEGTGRQAVLKGMGSGQ 89 (98)
T ss_dssp CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEET-TTTEEEEEES-SCHHHHHHHHHTTTSCEEEEESCCCC
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEEC-CCCEEEEEEe-CCHHHHHHHHHHhCCceEEccCCCCc
Confidence 357889999999999999999999999999999998 9999999997 99999999999843378888876544
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.14 E-value=4.9e-10 Score=65.46 Aligned_cols=64 Identities=16% Similarity=0.246 Sum_probs=57.3
Q ss_pred ceeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEE--ccccCHHHHHHHHHhhcC-ceEE
Q 048349 2 KRMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVT--GDGMDAIVLFMSLRKKLR-YATF 68 (94)
Q Consensus 2 ~q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~--G~~vDp~~l~~~LrKk~~-~aei 68 (94)
.|++.|+|. |+|.+|..++.+++.+++||.++.+|. ..++++|. +. +++..+.+.|++ .| .+++
T Consensus 1 a~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~-~~~~~i~~~i~~-~Gy~~~~ 68 (69)
T 4a4j_A 1 AQTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNF-ALEQAVVSYHGE-TTPQILTDAVER-AGYHARV 68 (69)
T ss_dssp CEEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTT-CCHHHHHHHHHH-TTCEEEE
T ss_pred CCEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCC-CCHHHHHHHHHH-cCCceEe
Confidence 378899995 999999999999999999999999998 99999998 66 899999999998 55 5654
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.04 E-value=1.4e-09 Score=64.42 Aligned_cols=68 Identities=10% Similarity=-0.005 Sum_probs=59.0
Q ss_pred ceeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcCceEEEe
Q 048349 2 KRMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLRYATFIA 70 (94)
Q Consensus 2 ~q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~~aeivs 70 (94)
|+++.|+| .|+|.+|..++.+++.+++||.++.++. ..++++|..+ .+++..+...|++.+-.+++++
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVAL-LQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEG-GGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 46788999 4999999999999999999999999998 9999999754 2799999999998444788775
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.04 E-value=1e-09 Score=65.61 Aligned_cols=66 Identities=11% Similarity=0.080 Sum_probs=59.2
Q ss_pred CceeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcC-ceEEEec
Q 048349 1 MKRMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLR-YATFIAS 71 (94)
Q Consensus 1 M~q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~-~aeivsv 71 (94)
|++++.|+|. |+|..|..++.+++.+ +||.++.+|. ..++++|.++ ++..|...|++ .| .+++++.
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~-~~~~~~v~~~--~~~~i~~~i~~-~Gy~~~~~~~ 70 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDL-NEAVVAGNKE--DVDKYIKAVEA-AGYQAKLRSS 70 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECS-SEEEEEEEGG--GHHHHHHHHHH-TTCEEEECCS
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEc-cCCEEEEEEC--CHHHHHHHHHH-cCCceEecCc
Confidence 5778899995 9999999999999999 9999999998 9999999998 99999999998 55 6777653
No 7
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.96 E-value=8.9e-09 Score=58.88 Aligned_cols=62 Identities=15% Similarity=0.186 Sum_probs=53.2
Q ss_pred CceeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc-ccCHHHHHHHHHhhcC
Q 048349 1 MKRMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD-GMDAIVLFMSLRKKLR 64 (94)
Q Consensus 1 M~q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~-~vDp~~l~~~LrKk~~ 64 (94)
|++++.|++. |+|..|..++.+.+.+++||.++.+|. ..++++|..+ .+++..+...+++ .|
T Consensus 1 m~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~-~G 64 (71)
T 2xmw_A 1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNF-ALEQAVVSYHGETTPQILTDAVER-AG 64 (71)
T ss_dssp -CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEC---CHHHHHHHHHH-HT
T ss_pred CCcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCCCHHHHHHHHHH-cC
Confidence 8899999997 999999999999999999999999998 8899999754 2678888888887 44
No 8
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.87 E-value=7.8e-09 Score=59.45 Aligned_cols=59 Identities=19% Similarity=0.250 Sum_probs=52.3
Q ss_pred EEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcC-ceE
Q 048349 6 GIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLR-YAT 67 (94)
Q Consensus 6 VlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~-~ae 67 (94)
.|+|. |+|..|..++.+.+.+++||.++.+|. ..++++|.+. +++..+.+.+++ .| .+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~-~Gy~~~ 63 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSL-EKGEALVEGT-ADPKALVQAVEE-EGYKAE 63 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECS-SSCBEEECSC-CCHHHHHHHHHT-TTCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEe-CCCEEEECCC-CCHHHHHHHHHH-cCCCcE
Confidence 46775 999999999999999999999999998 9999999776 899999999998 55 444
No 9
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.82 E-value=2.3e-08 Score=73.29 Aligned_cols=70 Identities=13% Similarity=0.193 Sum_probs=61.8
Q ss_pred eeEEEEEeCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcCceEEEeccCC
Q 048349 3 RMVGIEQPLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLRYATFIASKLR 74 (94)
Q Consensus 3 q~vVlKV~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~~aeivsv~p~ 74 (94)
.++.|+|.|+|..|.+++.+++.+++||.++.+|. ..++++|.+. +++..+.+.|++..-.+.++..+++
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl-~~~~v~V~~~-~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDI-EQQIMSVESS-VAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEES-SCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEc-CCCEEEEecc-CCHHHHHHHHHHcCCccccccCCCc
Confidence 45788999999999999999999999999999998 9999999998 8999999999984337888776554
No 10
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.79 E-value=1.3e-08 Score=57.09 Aligned_cols=55 Identities=9% Similarity=0.121 Sum_probs=51.0
Q ss_pred EEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHh
Q 048349 5 VGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRK 61 (94)
Q Consensus 5 vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrK 61 (94)
+.|+| .|+|..|..++.+.+.+++||.++.+|. ..++++|.+. +++..+.+.|++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~ 58 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDL-TSKKVTITSA-LGEEQLRTAIAS 58 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECT-TTCEEEEECS-SCHHHHHHHHHH
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEe-cCCEEEEEec-CCHHHHHHHHHH
Confidence 56888 5999999999999999999999999998 9999999987 899999999987
No 11
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.73 E-value=1.2e-07 Score=54.29 Aligned_cols=61 Identities=15% Similarity=0.120 Sum_probs=52.5
Q ss_pred ceeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC
Q 048349 2 KRMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR 64 (94)
Q Consensus 2 ~q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~ 64 (94)
++++.|+|. |+|..|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...|++ .|
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 67 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQL-AEGTVEVTIDSSVVTLKDIVAVIED-QG 67 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEETTTSCHHHHHHHHHH-TT
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 456788985 999999999999999999999999998 8999999743 2688889998887 44
No 12
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.71 E-value=6e-08 Score=56.36 Aligned_cols=49 Identities=22% Similarity=0.203 Sum_probs=45.7
Q ss_pred CceeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccC
Q 048349 1 MKRMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMD 51 (94)
Q Consensus 1 M~q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vD 51 (94)
|++++.|+|. |+|..|..++.+.+.+++||.++.+|. ..++++|.++ .+
T Consensus 1 m~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~ 50 (71)
T 2aj0_A 1 MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNF-GASKITVTGE-AS 50 (71)
T ss_dssp CCCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECC-SSEEEEEEES-CC
T ss_pred CCeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEC-CCCEEEEEec-Cc
Confidence 8888999997 999999999999999999999999998 9999999987 45
No 13
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.70 E-value=1.9e-07 Score=53.48 Aligned_cols=66 Identities=11% Similarity=-0.006 Sum_probs=55.0
Q ss_pred eEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc-ccCHHHHHHHHHhhcCceEEEe
Q 048349 4 MVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD-GMDAIVLFMSLRKKLRYATFIA 70 (94)
Q Consensus 4 ~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~-~vDp~~l~~~LrKk~~~aeivs 70 (94)
++.|++. |+|..|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+++.+-.+.+++
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISL-VTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBT-TTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 5678885 999999999999999999999999998 8899998743 2688899999988433666653
No 14
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.69 E-value=8.4e-08 Score=71.54 Aligned_cols=70 Identities=13% Similarity=0.193 Sum_probs=61.9
Q ss_pred eeEEEEEeCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcCceEEEeccCC
Q 048349 3 RMVGIEQPLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLRYATFIASKLR 74 (94)
Q Consensus 3 q~vVlKV~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~~aeivsv~p~ 74 (94)
.++.|+|.|+|..|.+++.+++.+++||.++.+|. ..++++|.+. +++..|.+.|++..-.+.++..+++
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl-~~~~v~V~~~-~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDI-EQQIMSVESS-VAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEES-SCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEc-CCCeEEEecC-CCHHHHHHHHHHhCCCcccccCCcc
Confidence 35788999999999999999999999999999998 9999999988 8999999999984336888776554
No 15
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.64 E-value=1.8e-07 Score=53.60 Aligned_cols=61 Identities=15% Similarity=0.097 Sum_probs=52.9
Q ss_pred ceeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC
Q 048349 2 KRMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR 64 (94)
Q Consensus 2 ~q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~ 64 (94)
.+++.|+| .|+|..|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+++ .|
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 65 (72)
T 1aw0_A 2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSL-ANSNGTVEYDPLLTSPETLRGAIED-MG 65 (72)
T ss_dssp CEEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-HT
T ss_pred CeEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCcCCHHHHHHHHHH-CC
Confidence 36778899 5999999999999999999999999998 8999999765 2578888888887 44
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.63 E-value=5.4e-07 Score=52.31 Aligned_cols=67 Identities=12% Similarity=0.077 Sum_probs=56.0
Q ss_pred ceeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC-ceEEEe
Q 048349 2 KRMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR-YATFIA 70 (94)
Q Consensus 2 ~q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~-~aeivs 70 (94)
++++.|++ .|+|..|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+.+ .| .+.+..
T Consensus 1 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~ 71 (75)
T 3cjk_B 1 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSL-EEKNATIIYDPKLQTPKTLQEAIDD-MGFDAVIHN 71 (75)
T ss_dssp CEEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-TTCCEEEEE
T ss_pred CcEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCceEeec
Confidence 35677888 5999999999999999999999999998 8999999754 2678889999988 45 566554
No 17
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.63 E-value=4.2e-07 Score=50.65 Aligned_cols=60 Identities=12% Similarity=0.152 Sum_probs=50.9
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR 64 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~ 64 (94)
.+..|++. |+|.+|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+.+ .|
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 64 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNL-EAGKVDVSFDADKVSVKDIADAIED-QG 64 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-TT
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 35578886 999999999999999999999999997 8999999743 2678888888887 44
No 18
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.62 E-value=2.2e-07 Score=53.15 Aligned_cols=63 Identities=17% Similarity=0.126 Sum_probs=53.3
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC-ceE
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR-YAT 67 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~-~ae 67 (94)
+++.|++. |+|..|..++.+.+.+++||.++.+|. ..++++|..+ .+++..+...|.+ .| .+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~ 69 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTF-ETRQAVVTFDDAKTSVQKLTKATAD-AGYPSS 69 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEETTTCCHHHHHHHHHH-TTCCCE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHh-cCCCeE
Confidence 56778885 999999999999999999999999998 8899999754 2678889998988 45 444
No 19
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.62 E-value=5.6e-08 Score=60.41 Aligned_cols=57 Identities=9% Similarity=-0.027 Sum_probs=52.7
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHh
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRK 61 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrK 61 (94)
+++.|+|. |+|..|..++.+++.+++||.++.+|. ..++++|.+. +++..|.+.|++
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l-~~~~~~V~~~-~~~~~i~~~i~~ 79 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADP-ASRTVVVGGV-SDAAHIAEIITA 79 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEET-TTTEEEEESC-CCHHHHHHHHHH
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEEC-CCCEEEEEec-CCHHHHHHHHHH
Confidence 45678884 999999999999999999999999998 9999999997 999999999987
No 20
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.60 E-value=2.4e-07 Score=57.31 Aligned_cols=58 Identities=9% Similarity=0.000 Sum_probs=50.8
Q ss_pred eEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhh
Q 048349 4 MVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKK 62 (94)
Q Consensus 4 ~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk 62 (94)
++.|+| .|+|..|..++.+++.+++||.++.++. ..++++|..+ .+++..+...|.+.
T Consensus 4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l-~~~~~~V~~~~~~~~~~~i~~~i~~~ 64 (90)
T 2g9o_A 4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSL-ENRSAIVVYNASSVTPESLRKAIEAV 64 (90)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEECCSSCCTHHHHHHHHTT
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHhc
Confidence 456777 5999999999999999999999999998 9999999753 26888999999985
No 21
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.57 E-value=4.8e-07 Score=53.08 Aligned_cols=68 Identities=13% Similarity=-0.000 Sum_probs=55.7
Q ss_pred ceeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcCceEEEe
Q 048349 2 KRMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLRYATFIA 70 (94)
Q Consensus 2 ~q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~~aeivs 70 (94)
|+++.|+| .|+|..|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+.+.+-.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVAL-MAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBT-TTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 45677888 5999999999999999999999999998 8899999754 2678889998988432565553
No 22
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.56 E-value=8.5e-07 Score=51.47 Aligned_cols=60 Identities=15% Similarity=0.089 Sum_probs=49.7
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcC
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
+++.|++. |+|..|..++.+.+.+++||.++.+|. ..++++|..+.-.+..+...|.+ .|
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~-~~~~~~v~~~~~~~~~i~~~i~~-~G 63 (73)
T 1mwy_A 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLF-ATEKLVVDADNDIRAQVESALQK-AG 63 (73)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEET-TTTEEEEEESSCCHHHHHHHHHH-HT
T ss_pred eEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCHHHHHHHHHH-cC
Confidence 46678885 999999999999999999999999998 89999998763235567777776 44
No 23
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.52 E-value=6.4e-07 Score=51.57 Aligned_cols=64 Identities=5% Similarity=-0.050 Sum_probs=51.7
Q ss_pred eeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcCceE
Q 048349 3 RMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLRYAT 67 (94)
Q Consensus 3 q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~~ae 67 (94)
+++.|++ .|+|..|..++.+.+.+++||.++.+|. ..++++|..+ .+++..+...+.+.+-.+.
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 70 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVAL-ATNKAHIKYDPEIIGPRDIIHTIESLGFEPS 70 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEET-TTTEEEEEECTTTTHHHHHHHHHHHHHCEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHcCCCce
Confidence 4577888 5999999999999999999999999998 8899999765 1466778888877332343
No 24
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.49 E-value=8.8e-07 Score=50.78 Aligned_cols=60 Identities=15% Similarity=0.212 Sum_probs=51.1
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR 64 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~ 64 (94)
++..|+|. |+|..|..++.+.+.+++||.++.+|. ..++++|.-+ .+++..+...+.+ .|
T Consensus 6 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 68 (76)
T 1opz_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNL-ATETVNVIYDPAETGTAAIQEKIEK-LG 68 (76)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEG-GGTEEEEEECTTTCCHHHHHHHHHH-HT
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-CC
Confidence 45678885 999999999999999999999999998 8899998732 2688888888887 44
No 25
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.48 E-value=6.3e-07 Score=50.27 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=48.3
Q ss_pred EEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc-ccCHHHHHHHHHh
Q 048349 5 VGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD-GMDAIVLFMSLRK 61 (94)
Q Consensus 5 vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~-~vDp~~l~~~LrK 61 (94)
..|++. |+|..|..++.+.+.+++||.++.++. ..++++|..+ ..++..+.+.+++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~ 60 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSV-EKKSVVVEFDAPATQDLIKEALLD 60 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEET-TTTEEEEEECTTCCHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEc-CCCEEEEEECCCCCHHHHHHHHHH
Confidence 457774 999999999999999999999999998 8999999764 2477888888877
No 26
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.47 E-value=8e-07 Score=58.22 Aligned_cols=69 Identities=9% Similarity=0.006 Sum_probs=56.8
Q ss_pred eeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcCceEEEecc
Q 048349 3 RMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLRYATFIASK 72 (94)
Q Consensus 3 q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~~aeivsv~ 72 (94)
+.+.|+| .|+|..|..++.+.+.+++||.++.++. ..++++|.-+ .+++..|.+.|++.+-.+.+++..
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 145 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNF-ALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ 145 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEET-TTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCcc
Confidence 4567888 5999999999999999999999999998 8899999732 278999999998843256665443
No 27
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.45 E-value=6.1e-07 Score=52.70 Aligned_cols=66 Identities=12% Similarity=0.034 Sum_probs=54.4
Q ss_pred eeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcCceEEE
Q 048349 3 RMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLRYATFI 69 (94)
Q Consensus 3 q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~~aeiv 69 (94)
+++.|++ .|+|..|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+++.+-.+.+.
T Consensus 8 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSL-EEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp EEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEG-GGTEEEEEECTTTCCHHHHHHHHHHHCCCEEEC
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHHCCCceEec
Confidence 4677888 5999999999999999999999999998 8899999754 267888999998843245543
No 28
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.44 E-value=1.9e-06 Score=50.23 Aligned_cols=65 Identities=11% Similarity=0.059 Sum_probs=53.8
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC-ceEEE
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR-YATFI 69 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~-~aeiv 69 (94)
.+..|++. |+|..|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+.+ .| .+.++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~~ 71 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNF-ALETVTVEYNPKEASVSDLKEAVDK-LGYKLKLK 71 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCS-SSSEEEEEECTTTCCHHHHHHHHHH-HTSEEEEC
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCeEEec
Confidence 45678886 999999999999999999999999998 8899998643 2678888888887 45 45554
No 29
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.43 E-value=1.1e-06 Score=52.90 Aligned_cols=65 Identities=9% Similarity=0.089 Sum_probs=54.4
Q ss_pred eeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC-ceEEE
Q 048349 3 RMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR-YATFI 69 (94)
Q Consensus 3 q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~-~aeiv 69 (94)
+++.|+| .|+|..|..++.+.+.+++||.++.+|. ..++++|..+ .+++..+...+.+ .| .+.+.
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~ 77 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSL-DNQEATIVYQPHLISVEEMKKQIEA-MGFPAFVK 77 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECS-TTTEEEEEECTTTCCHHHHHHHHHH-TTCCEECS
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCceEec
Confidence 4567888 5999999999999999999999999998 8999999864 2688889999988 55 45443
No 30
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.42 E-value=1.1e-06 Score=49.48 Aligned_cols=61 Identities=16% Similarity=0.229 Sum_probs=51.0
Q ss_pred EEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC-ceEE
Q 048349 6 GIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR-YATF 68 (94)
Q Consensus 6 VlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~-~aei 68 (94)
.|++ .|+|..|..++.+.+.+++||.++.++. ..++++|..+ .+++..+.+.+++ .| .+++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQL-KKEKAVVKFDEANVQATEICQAINE-LGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHT-TSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCCccc
Confidence 4566 5999999999999999999999999998 8999999764 2688889998988 45 4443
No 31
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.41 E-value=1.9e-06 Score=48.46 Aligned_cols=60 Identities=13% Similarity=0.172 Sum_probs=50.6
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR 64 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~ 64 (94)
++..|++. |+|.+|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+.+ .|
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 65 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTV-ATGRLTVTYDPKQVSEITIQERIAA-LG 65 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEET-TTTEEEEEECTTTCCTHHHHHHHHT-TT
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 45568886 999999999999999999999999998 8999998743 2677888888887 44
No 32
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.35 E-value=5.2e-07 Score=51.87 Aligned_cols=55 Identities=9% Similarity=0.138 Sum_probs=48.0
Q ss_pred EEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcC
Q 048349 5 VGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 5 vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
..|+| .|+|.+|..++.+++.++ ||.++.+|. ..++++|.++ .+ ..+...+++ .|
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~-~~~~~~v~~~-~~-~~i~~~i~~-~G 58 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSV-EEKKVVVETE-NL-DSVLKKLEE-ID 58 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEET-TTTEEEEECS-CH-HHHHHHHHT-TT
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEEC-CCCEEEEEEC-CH-HHHHHHHHH-cC
Confidence 56888 699999999999999999 999999998 8999999987 44 778888877 44
No 33
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.33 E-value=2.9e-06 Score=54.52 Aligned_cols=60 Identities=13% Similarity=0.174 Sum_probs=52.0
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR 64 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~ 64 (94)
+++.|+|. |+|..|.+++.+.+.+++||.++.++. ..++++|..+ .+++..+...|++ .|
T Consensus 8 ~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~-~~~~~~V~~~~~~~~~~~i~~~i~~-~G 70 (111)
T 2ofg_X 8 KTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTV-ATGRLTVTYDPKQVSEITIQERIAA-LG 70 (111)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEET-TTTEEEEEECTTTCSHHHHHHHHHT-TT
T ss_pred eEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEC-CCCEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 46788985 999999999999999999999999998 8899999754 2577888998988 45
No 34
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.27 E-value=4.9e-06 Score=51.32 Aligned_cols=67 Identities=12% Similarity=0.092 Sum_probs=55.1
Q ss_pred eeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccc--cCHHHHHHHHHhhcC-ceEEEec
Q 048349 3 RMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDG--MDAIVLFMSLRKKLR-YATFIAS 71 (94)
Q Consensus 3 q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~--vDp~~l~~~LrKk~~-~aeivsv 71 (94)
.++.|.| .|+|..|..++.+.+..++||.++.++. ..+.++|..+. +++..+...+.. .| .+.+...
T Consensus 16 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~~ 86 (95)
T 2kkh_A 16 QKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIV-PSRTVIVVHDSLLISPFQIAKALNE-ARLEANVRVN 86 (95)
T ss_dssp EEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-HTCCEEESCC
T ss_pred EEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHH-cCCceEEecC
Confidence 4567888 5999999999999999999999999998 88999998652 578888888888 45 5555443
No 35
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.26 E-value=3.2e-06 Score=54.93 Aligned_cols=64 Identities=8% Similarity=0.006 Sum_probs=54.1
Q ss_pred eeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcC-ceEE
Q 048349 3 RMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLR-YATF 68 (94)
Q Consensus 3 q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~-~aei 68 (94)
+++.|+| .|+|..|..++.+++.+++||.++.++. ..++++|..+ .+++..+.+.|.+ .| .+++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~ 147 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVAL-ATSKALVKFDPEIIGPRDIIKIIEE-IGFHASL 147 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEET-TTTEEEEECCTTTSCHHHHHHHHHH-HTCEEEC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEc-CCCEEEEEECCCCCCHHHHHHHHHh-CCCceEe
Confidence 3567888 5999999999999999999999999998 9999999765 2688899999988 45 4443
No 36
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.25 E-value=2.6e-06 Score=48.43 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=48.8
Q ss_pred EEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc-ccCHHHHHHHHHhhcC
Q 048349 6 GIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD-GMDAIVLFMSLRKKLR 64 (94)
Q Consensus 6 VlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~-~vDp~~l~~~LrKk~~ 64 (94)
.|++ .|+|..|..++.+.+.+++||.++.+|. ..++++|..+ ..++..+...+++ .|
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~-~G 61 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSY-PKGTAQLAIVPGTSPDALTAAVAG-LG 61 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEET-TTTEEEEEECTTSCHHHHHHHHHT-TT
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEc-cCCEEEEEECCCCCHHHHHHHHHH-CC
Confidence 3566 5999999999999999999999999998 8899988754 2578889999988 55
No 37
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.22 E-value=7.6e-06 Score=56.87 Aligned_cols=69 Identities=9% Similarity=0.038 Sum_probs=55.5
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcCceEEEecc
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLRYATFIASK 72 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~~aeivsv~ 72 (94)
+++.|+|. |+|..|..++.+++.+++||.++.++. ..++++|..+ .+++..+...|.+.+-.+.++...
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 193 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSL-AEGTATVLYNPAVISPEELRAAIEDMGFEASVVSES 193 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC---
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCC
Confidence 35778884 999999999999999999999999998 8899999743 268899999998843267766543
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.21 E-value=5.8e-06 Score=53.65 Aligned_cols=68 Identities=12% Similarity=-0.004 Sum_probs=55.2
Q ss_pred CceeEEEEE-eCcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcCceEEE
Q 048349 1 MKRMVGIEQ-PLENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLRYATFI 69 (94)
Q Consensus 1 M~q~vVlKV-~m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~~aeiv 69 (94)
=++++.|+| .|+|.+|..++.+++.+++||.++.++. ..++++|..+ ..++..+...+...+-.+.++
T Consensus 2 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (149)
T 2ew9_A 2 APQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVAL-MAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM 72 (149)
T ss_dssp CCEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEET-TTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred CcEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEe-cCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence 057889999 5999999999999999999999999997 8889988643 267788999888733245543
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=97.89 E-value=4.1e-05 Score=53.11 Aligned_cols=59 Identities=12% Similarity=0.145 Sum_probs=51.4
Q ss_pred eeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhh
Q 048349 3 RMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKK 62 (94)
Q Consensus 3 q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk 62 (94)
+++.|+|. |+|.+|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...+++.
T Consensus 20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSL-ENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 46678886 999999999999999999999999997 9999999754 26788888888874
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=97.78 E-value=0.00014 Score=47.35 Aligned_cols=59 Identities=14% Similarity=0.207 Sum_probs=49.2
Q ss_pred ceeEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHh
Q 048349 2 KRMVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRK 61 (94)
Q Consensus 2 ~q~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrK 61 (94)
+++..|.+. |+|.+|..++.+.+.+++||.++.++. ..++++|..+ .+++..+...++.
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~ 66 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNL-ATETVNVIYDPAETGTAAIQEKIEK 66 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEG-GGTEEEEEECTTTSCHHHHHHHHHH
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEc-cCCEEEEEEcCCcCCHHHHHHHHHH
Confidence 345667885 999999999999999999999999997 8888888632 2578888888876
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.27 E-value=0.00084 Score=55.78 Aligned_cols=62 Identities=13% Similarity=0.018 Sum_probs=52.6
Q ss_pred eEEEEEe-CcchhhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEcc--ccCHHHHHHHHHhhcCce
Q 048349 4 MVGIEQP-LENDKSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGD--GMDAIVLFMSLRKKLRYA 66 (94)
Q Consensus 4 ~vVlKV~-m~c~~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~--~vDp~~l~~~LrKk~~~a 66 (94)
++.++|+ |+|..|..++.+.+.+++||.++.++. ..++++|.-+ .+++..+.+.+++.+-.+
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl-~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~ 67 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNL-ATETAFIRFDEKRIDFETIKRVIEDLGYGV 67 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHHHCCEE
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEc-CCCEEEEEeCCCcCCHHHHHHHHHhcCCcc
Confidence 4567885 999999999999999999999999998 9999999743 379999999999843233
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=91.38 E-value=0.35 Score=31.82 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=35.9
Q ss_pred HHHHHHHhcCCCCeeEEEe-----cCCCC-CcEEEEccccCHHHHHHHHHhhcC
Q 048349 17 RSKALKIVGGMPGVESVAF-----KGDDR-SQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 17 ~~K~~k~i~~~~GV~sV~i-----d~~~~-~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
--..-+.+++++||+.|.+ |.+-. =++|+.|+.+|...+.+.|.+.++
T Consensus 21 ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~Gg 74 (100)
T 3bpd_A 21 TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGG 74 (100)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTC
T ss_pred HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 3345567889999988754 43111 278999999999999999999655
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=87.90 E-value=0.84 Score=29.81 Aligned_cols=46 Identities=15% Similarity=0.139 Sum_probs=34.7
Q ss_pred HHHHHhcCCCCeeEEEe-----cCCCC-CcEEEEccccCHHHHHHHHHhhcC
Q 048349 19 KALKIVGGMPGVESVAF-----KGDDR-SQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 19 K~~k~i~~~~GV~sV~i-----d~~~~-~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
..-+.+++++||+.|.+ |.+-. =++|+.|+.+|...+.+.+.+.++
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg 73 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGC 73 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 34566788999988754 43111 278999999999999999999665
No 44
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=87.53 E-value=3.9 Score=25.93 Aligned_cols=46 Identities=17% Similarity=0.231 Sum_probs=33.9
Q ss_pred hhHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHh
Q 048349 15 KSRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRK 61 (94)
Q Consensus 15 ~C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrK 61 (94)
+-...+...|..++||+-...|. ..+++.|+=++=+...+.+.+.+
T Consensus 17 ~~~~~V~~~L~~ipgvEi~~~~~-~~GkiVV~iEa~~~~~l~~~i~~ 62 (95)
T 2jsx_A 17 ERISDISTQLNAFPGCEVAVSDA-PSGQLIVVVEAEDSETLIQTIES 62 (95)
T ss_dssp TSHHHHHHHHTTSTTEEEEEEET-TTTEEEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCeEEEEecC-CCCCEEEEEEeCCHHHHHHHHHH
Confidence 56788999999999996656675 67788776654466666666643
No 45
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=87.48 E-value=0.78 Score=29.98 Aligned_cols=46 Identities=15% Similarity=0.269 Sum_probs=33.6
Q ss_pred HHHHHhcCCCCeeEEE-----ecCCCCC-cEEEEccccCHHHHHHHHHhhcC
Q 048349 19 KALKIVGGMPGVESVA-----FKGDDRS-QIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 19 K~~k~i~~~~GV~sV~-----id~~~~~-kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
..-+.+++++||+.|. +|.+-.+ ++|+.|+.+|...+.+.|.+.++
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg 74 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGG 74 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 4445667778877764 3432222 78999999999999999999665
No 46
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=77.53 E-value=4.9 Score=25.44 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=29.3
Q ss_pred eEEEEEeCcchhhHHHHHHHhcCCCCeeEEEecC
Q 048349 4 MVGIEQPLENDKSRSKALKIVGGMPGVESVAFKG 37 (94)
Q Consensus 4 ~vVlKV~m~c~~C~~K~~k~i~~~~GV~sV~id~ 37 (94)
++|+.+.-.+.+--.+..+.|.+++||.|..+=.
T Consensus 43 kiVV~iEa~~~~~l~~~i~~I~~i~GVlst~lvy 76 (95)
T 2jsx_A 43 QLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVY 76 (95)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTSTTEEEEEESS
T ss_pred CEEEEEEeCCHHHHHHHHHHHhcCCCccEEeEEE
Confidence 6888888888887788889999999999998864
No 47
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=71.64 E-value=4.7 Score=25.21 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=27.1
Q ss_pred eEEEEEeCcchhh------HHHHHHHhcCCCCeeEEEecC
Q 048349 4 MVGIEQPLENDKS------RSKALKIVGGMPGVESVAFKG 37 (94)
Q Consensus 4 ~vVlKV~m~c~~C------~~K~~k~i~~~~GV~sV~id~ 37 (94)
.+.+.+.+.+.+| +..+..++..++||.++.++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l 81 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEV 81 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEE
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEE
Confidence 4557777777777 677888888999999998875
No 48
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=69.83 E-value=12 Score=23.62 Aligned_cols=39 Identities=15% Similarity=0.353 Sum_probs=28.3
Q ss_pred HHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHH
Q 048349 18 SKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSL 59 (94)
Q Consensus 18 ~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~L 59 (94)
.+..+.+....|+.+|+++ ++.++|++.|. |...+-+..
T Consensus 34 Gk~Ik~I~e~tGv~~IdI~-eddG~V~I~g~--~~ea~~~A~ 72 (91)
T 2cpq_A 34 GSNIQQARKVPGVTAIELD-EDTGTFRIYGE--SADAVKKAR 72 (91)
T ss_dssp THHHHHHHTSTTEEEEEEE-TTTTEEEEEES--SHHHHHHHH
T ss_pred cHHHHHHHHHhCCeEEEEE-cCCCEEEEEEC--CHHHHHHHH
Confidence 3556666777999889998 36799999996 555554333
No 49
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=65.94 E-value=7.2 Score=24.27 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=26.5
Q ss_pred eEEEEEeCcchhh------HHHHHHHhcCCCCeeEEEecC
Q 048349 4 MVGIEQPLENDKS------RSKALKIVGGMPGVESVAFKG 37 (94)
Q Consensus 4 ~vVlKV~m~c~~C------~~K~~k~i~~~~GV~sV~id~ 37 (94)
.+.+.+.+...+| +..+..++..++||.+++++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l 82 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVEL 82 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEE
Confidence 4566777777777 567788888999999998875
No 50
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=54.62 E-value=8.2 Score=24.40 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=27.0
Q ss_pred eEEEEEeCcchhh------HHHHHHHh-cCCCCeeEEEecC
Q 048349 4 MVGIEQPLENDKS------RSKALKIV-GGMPGVESVAFKG 37 (94)
Q Consensus 4 ~vVlKV~m~c~~C------~~K~~k~i-~~~~GV~sV~id~ 37 (94)
.+.+.+.+...+| +..+..++ ..++||.++.++.
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l 85 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNV 85 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEE
Confidence 4667777777777 66788888 8899999998875
No 51
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=51.48 E-value=32 Score=19.57 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=14.4
Q ss_pred EEEeCcchhhHHHHHHHhcCCCCeeEEE
Q 048349 7 IEQPLENDKSRSKALKIVGGMPGVESVA 34 (94)
Q Consensus 7 lKV~m~c~~C~~K~~k~i~~~~GV~sV~ 34 (94)
+.+......--..+++.+.+++||.++.
T Consensus 49 i~v~~~~~~~l~~l~~~L~~~~~V~~v~ 76 (88)
T 2ko1_A 49 LMIFVKNTDKLTTLMDKLRKVQGVFTVE 76 (88)
T ss_dssp EEEEESSHHHHHHHHHHHTTCTTEEEEE
T ss_pred EEEEECCHHHHHHHHHHHhcCCCceEEE
Confidence 3344434444455555566666665553
No 52
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=51.23 E-value=30 Score=21.83 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=30.8
Q ss_pred HHHHhcCCCCeeEEEecCCCCCcEEEEcc-ccCHHHHHHHHHhh
Q 048349 20 ALKIVGGMPGVESVAFKGDDRSQIEVTGD-GMDAIVLFMSLRKK 62 (94)
Q Consensus 20 ~~k~i~~~~GV~sV~id~~~~~kvtV~G~-~vDp~~l~~~LrKk 62 (94)
.-+.|-.++||.+|-+.. |=|||+-. .+|-..|.-.++..
T Consensus 41 LA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~I~~~ 81 (94)
T 2k1h_A 41 FINRLFEIEGVKSIFYVL---DFISIDKEDNANWNELLPQIENT 81 (94)
T ss_dssp HHHHHHTSTTEEEEEEET---TEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHHH
Confidence 344555899999999987 78999775 37888888777653
No 53
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=46.18 E-value=20 Score=23.86 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=25.6
Q ss_pred cEEEEccccCHHHHHHHHHhh-cCceEEEecc
Q 048349 42 QIEVTGDGMDAIVLFMSLRKK-LRYATFIASK 72 (94)
Q Consensus 42 kvtV~G~~vDp~~l~~~LrKk-~~~aeivsv~ 72 (94)
=+.|+|+ -|-.-++++||.+ +..+.++++.
T Consensus 112 ~vLvSgD-~DF~plv~~lr~~~G~~V~v~g~~ 142 (165)
T 2qip_A 112 VILVSGD-GDFSLLVERIQQRYNKKVTVYGVP 142 (165)
T ss_dssp EEEECCC-GGGHHHHHHHHHHHCCEEEEEECG
T ss_pred EEEEECC-hhHHHHHHHHHHHcCcEEEEEeCC
Confidence 5678999 6999999999997 6689998864
No 54
>3hrg_A Uncharacterized protein BT_3980 with actin-like A fold; NP_812891.1, bacteroides thetaiotaomicron BT_3980; HET: MSE UNL; 1.85A {Bacteroides thetaiotaomicron vpi-5482}
Probab=38.06 E-value=43 Score=24.17 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=30.7
Q ss_pred EecCCCCCcEEEEccccCHHHHHHHHHhhcCceEEEecc
Q 048349 34 AFKGDDRSQIEVTGDGMDAIVLFMSLRKKLRYATFIASK 72 (94)
Q Consensus 34 ~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~~aeivsv~ 72 (94)
.+|. +++.+.+.|+.-+-..+.+.|+|-.+++.++.|.
T Consensus 208 ~ld~-e~~~l~l~G~i~~~~~l~~~L~~Yi~~v~~~~p~ 245 (257)
T 3hrg_A 208 EFNQ-ERDELHLTGTLSDKETLMNELKKFILQVFIMNPA 245 (257)
T ss_dssp TCCT-TTCEEEEEECCTTHHHHHHHHHHHCSCEEECSSS
T ss_pred CCCc-cccEEEEEecCCCcHHHHHHHHHHHhhEEEeCcc
Confidence 4676 8899999999435568889999988999998744
No 55
>3g74_A Protein of unknown function; APC21008.1, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; 2.43A {Eubacterium ventriosum atcc 27560}
Probab=37.50 E-value=29 Score=22.06 Aligned_cols=25 Identities=0% Similarity=-0.028 Sum_probs=22.7
Q ss_pred cCHHHHHHHHHhhcCceEEEeccCC
Q 048349 50 MDAIVLFMSLRKKLRYATFIASKLR 74 (94)
Q Consensus 50 vDp~~l~~~LrKk~~~aeivsv~p~ 74 (94)
+|..++++.+++.++.+++-..||.
T Consensus 60 isvm~II~~I~~~~P~l~I~~iGe~ 84 (100)
T 3g74_A 60 VSIMKIIEMADQTFQNVDIQNIGET 84 (100)
T ss_dssp EEHHHHHHHHHHHCSSEEEEECSCS
T ss_pred EEHHHHHHHHHHHCCCceEEEcCCC
Confidence 6899999999999999999998874
No 56
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=35.26 E-value=34 Score=25.06 Aligned_cols=18 Identities=22% Similarity=0.237 Sum_probs=13.6
Q ss_pred hHHHHHHHhcCCCCeeEE
Q 048349 16 SRSKALKIVGGMPGVESV 33 (94)
Q Consensus 16 C~~K~~k~i~~~~GV~sV 33 (94)
-.+++++.+...+||.+|
T Consensus 216 ~~~~I~~~i~~~~~V~~v 233 (306)
T 3j1z_P 216 TRQRIKLIAKEDPRVLGL 233 (306)
T ss_dssp HHHHHHHHHHHSTTBCCC
T ss_pred HHHHHHHHHhcCCCccee
Confidence 356778888888888765
No 57
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=34.62 E-value=48 Score=20.80 Aligned_cols=33 Identities=12% Similarity=0.035 Sum_probs=23.9
Q ss_pred EEEEEeCcch-h-hHHHHHHHhcCCCCeeEEEecC
Q 048349 5 VGIEQPLEND-K-SRSKALKIVGGMPGVESVAFKG 37 (94)
Q Consensus 5 vVlKV~m~c~-~-C~~K~~k~i~~~~GV~sV~id~ 37 (94)
.-+-+-+.++ + .-..+...+..++||+|+++..
T Consensus 53 L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 53 LKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp EEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEEE
T ss_pred EEEEEEEECCCccccHHHHHHHhcCCCceEEEEEE
Confidence 3344445555 4 4788888899999999999863
No 58
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=32.69 E-value=1e+02 Score=22.69 Aligned_cols=43 Identities=9% Similarity=-0.015 Sum_probs=31.2
Q ss_pred hHHHHHHHhcCCCCee--EEEecCCCCCcEEEEccccCHHHHHHHHHhhcC
Q 048349 16 SRSKALKIVGGMPGVE--SVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 16 C~~K~~k~i~~~~GV~--sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
..+.+++++.. +++. ++.-. .+++.|.|+ |+..++++|++-+|
T Consensus 26 L~~nI~~~L~~-~~~~~~~v~~~---~gri~V~~~--~~~~~~~~L~~vfG 70 (307)
T 1vbk_A 26 LMNNIREALVT-EEVPYKEIFSR---HGRIIVKTN--SPKEAANVLVRVFG 70 (307)
T ss_dssp HHHHHHHHHHH-TTCCCSEEEEE---TTEEEEECS--CHHHHHHHHTTSTT
T ss_pred HHHHHHHHhcc-cCccceeEEEE---CCEEEEEcC--CHHHHHHHHhhcCC
Confidence 45666777766 6666 35544 488998875 88999999988656
No 59
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=32.61 E-value=30 Score=21.77 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=30.5
Q ss_pred HHHHhcCCCCeeEEEecCCCCCcEEEEcc-ccCHHHHHHHHHhhc
Q 048349 20 ALKIVGGMPGVESVAFKGDDRSQIEVTGD-GMDAIVLFMSLRKKL 63 (94)
Q Consensus 20 ~~k~i~~~~GV~sV~id~~~~~kvtV~G~-~vDp~~l~~~LrKk~ 63 (94)
.-+.|-.++||.+|-+.. |=|||+-. .+|-..|.-.++...
T Consensus 41 LA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~V~~~I 82 (91)
T 1pqx_A 41 FINDILKVEGVKSIFHVM---DFISVDKENDANWETVLPKVEAVF 82 (91)
T ss_dssp HHHHHHHSTTEEEEEEET---TEEEEEECTTSCSTTTHHHHHHHT
T ss_pred HHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHHHH
Confidence 334455799999999987 78999775 377777777776643
No 60
>3mgj_A Uncharacterized protein MJ1480; saccharop_DH_N domain, NESG, structural genomics, PSI-2, protein structure initiative; 2.70A {Methanocaldococcus jannaschii}
Probab=31.93 E-value=63 Score=21.42 Aligned_cols=58 Identities=19% Similarity=0.214 Sum_probs=40.2
Q ss_pred ceeEEEEEeCcchhhHHHHHHHhcCCCC---eeEEEecCCC----CCcEEEEccccCHH---HHHHHHHh
Q 048349 2 KRMVGIEQPLENDKSRSKALKIVGGMPG---VESVAFKGDD----RSQIEVTGDGMDAI---VLFMSLRK 61 (94)
Q Consensus 2 ~q~vVlKV~m~c~~C~~K~~k~i~~~~G---V~sV~id~~~----~~kvtV~G~~vDp~---~l~~~LrK 61 (94)
+++|.|+=++-+.+--.+|+-.+..+-| |..+.+-..+ .-++.|.|. |+. .++.+|+.
T Consensus 3 sr~IeL~GHLiDSgil~~~LD~I~d~GG~F~I~~f~vG~~k~d~SyA~l~V~a~--d~e~L~~Il~~L~~ 70 (118)
T 3mgj_A 3 MREIELRGHIIDSLILPKVFDKILDMGGDYKVLEFEIGKRKTDPSYAKILVIGR--DERHVDEILNELRD 70 (118)
T ss_dssp EEEEEEEECCTTSSHHHHHHHHHHHTTCEEEEEEEECCSSTTSCEEEEEEEEES--SHHHHHHHHHHHHH
T ss_pred eEEEEEEEEeechhhHHHHHHHHHhcCCCEEEEEEecCCCCCCcceEEEEEecC--CHHHHHHHHHHHHH
Confidence 3567788788899999999999999888 3344443311 115899997 554 45666665
No 61
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=31.25 E-value=22 Score=21.26 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=18.4
Q ss_pred cCCCCe--eEEEecCCCCCcEEEEcc
Q 048349 25 GGMPGV--ESVAFKGDDRSQIEVTGD 48 (94)
Q Consensus 25 ~~~~GV--~sV~id~~~~~kvtV~G~ 48 (94)
+.+||+ +.|.+.. ..+.|+|.|+
T Consensus 13 ~dlPG~~~edi~V~v-~~~~L~I~g~ 37 (85)
T 3q9p_A 13 LDVNHFAPDELTVKT-KDGVVEITGK 37 (85)
T ss_dssp EECTTTCCSEEEEEE-ETTEEEEEEE
T ss_pred EECCCCChHHEEEEE-ECCEEEEEEE
Confidence 457787 6778887 7789999998
No 62
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=30.99 E-value=32 Score=25.27 Aligned_cols=24 Identities=17% Similarity=0.321 Sum_probs=20.5
Q ss_pred CCcEEEEccccCHHHHHHHHHhhcC
Q 048349 40 RSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 40 ~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
+-.+.|.|+ +|+.++...+++.++
T Consensus 189 n~~l~vvGd-~d~~~~~~~v~~~f~ 212 (445)
T 3ami_A 189 NATVVVVGD-VEHEAVFRLAEQTYG 212 (445)
T ss_dssp GEEEEEEES-CCHHHHHHHHHHTGG
T ss_pred ceEEEEEcC-CCHHHHHHHHHHHhc
Confidence 346889999 999999999998665
No 63
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=30.62 E-value=44 Score=19.28 Aligned_cols=19 Identities=26% Similarity=0.193 Sum_probs=15.8
Q ss_pred HHHHHhcCCCCeeEEEecC
Q 048349 19 KALKIVGGMPGVESVAFKG 37 (94)
Q Consensus 19 K~~k~i~~~~GV~sV~id~ 37 (94)
...+.|++.|||.+|+-|.
T Consensus 53 ~~~~~L~~~p~V~~Ve~D~ 71 (80)
T 3cnq_P 53 KAVEELKKDPSVAYVEEDK 71 (80)
T ss_dssp HHHHHHHTCTTEEEEEECC
T ss_pred HHHHHHHhCCCccEEEeCc
Confidence 3467788999999999985
No 64
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=30.07 E-value=86 Score=20.31 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=20.7
Q ss_pred HHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHH
Q 048349 18 SKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIV 54 (94)
Q Consensus 18 ~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~ 54 (94)
..+++..+.++.+ .|+++ .+.||++|. ++...
T Consensus 67 ~~aL~~~~~l~~i-~V~V~---~g~VtLsG~-v~s~~ 98 (132)
T 2kgs_A 67 EPVFTASVPIPDF-GLKVE---RDTVTLTGT-APSSE 98 (132)
T ss_dssp HHHHHHHTTCTTC-EEEEE---ETEEEEECE-ESSHH
T ss_pred HHHHHhcCcCCce-EEEEE---CCEEEEEEE-ECCHH
Confidence 5566666666543 34554 489999998 76553
No 65
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=27.81 E-value=74 Score=17.96 Aligned_cols=17 Identities=41% Similarity=0.653 Sum_probs=14.1
Q ss_pred HHHhcCCCCeeEEEecC
Q 048349 21 LKIVGGMPGVESVAFKG 37 (94)
Q Consensus 21 ~k~i~~~~GV~sV~id~ 37 (94)
.+.+++.+||+.|+-|.
T Consensus 44 ~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 44 VGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp HHHHHTSTTEEEEEECC
T ss_pred HHHHhcCCCceEEecCc
Confidence 45677999999999985
No 66
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=26.46 E-value=1.1e+02 Score=18.60 Aligned_cols=39 Identities=15% Similarity=0.253 Sum_probs=27.9
Q ss_pred HHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHH
Q 048349 17 RSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSL 59 (94)
Q Consensus 17 ~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~L 59 (94)
-+...+.+.++.|--..++|+ +.-.+.++|. |..+.+.|
T Consensus 19 lkemirqarkfagtvtytldg-ndleiritgv---peqvrkel 57 (85)
T 2kl8_A 19 LKEMIRQARKFAGTVTYTLDG-NDLEIRITGV---PEQVRKEL 57 (85)
T ss_dssp HHHHHHHHTTTTCEEEEEECS-SCEEEEEESC---CHHHHHHH
T ss_pred HHHHHHHHHhhcceEEEEecC-CeeEEEEecC---hHHHHHHH
Confidence 344455678999999999998 6668888886 44444444
No 67
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=25.31 E-value=45 Score=24.17 Aligned_cols=25 Identities=16% Similarity=0.165 Sum_probs=20.6
Q ss_pred CCCcEEEEccccCHHHHHHHHHhhcC
Q 048349 39 DRSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 39 ~~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
++-.+.|.|+ +|+.++.+.+++.++
T Consensus 181 ~n~~l~v~Gd-~~~~~~~~~i~~~f~ 205 (406)
T 3eoq_A 181 KNMVLAATGR-VDFDRLLAEAERLTE 205 (406)
T ss_dssp GGEEEEEEES-CCHHHHHHHHHHHHT
T ss_pred cCEEEEEEcC-CCHHHHHHHHHHHhc
Confidence 3346888999 999999999998764
No 68
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=25.17 E-value=66 Score=23.15 Aligned_cols=25 Identities=8% Similarity=0.065 Sum_probs=21.1
Q ss_pred CCCcEEEEccccCHHHHHHHHHhhcC
Q 048349 39 DRSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 39 ~~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
.+-.+.|.|+ +|+.++...+++.++
T Consensus 188 ~~~~l~v~Gd-~~~~~~~~~~~~~f~ 212 (424)
T 3amj_B 188 RTAVVTLVGD-ITRAEAETIAQQLTA 212 (424)
T ss_dssp TSCEEEEEES-CCHHHHHHHHHHTTT
T ss_pred CceEEEEEeC-CCHHHHHHHHHHHHh
Confidence 4457899999 999999999988665
No 69
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=24.68 E-value=80 Score=17.83 Aligned_cols=35 Identities=14% Similarity=-0.056 Sum_probs=21.7
Q ss_pred CceeEEEEEeCcchhhHHHHHHHhcCCCCeeEEEecC
Q 048349 1 MKRMVGIEQPLENDKSRSKALKIVGGMPGVESVAFKG 37 (94)
Q Consensus 1 M~q~vVlKV~m~c~~C~~K~~k~i~~~~GV~sV~id~ 37 (94)
|+.++++--.-.|.-|++ ++..+.. .|++-..+|.
T Consensus 4 ~m~~v~ly~~~~C~~C~~-~~~~L~~-~~i~~~~~di 38 (92)
T 2khp_A 4 SMVDVIIYTRPGCPYCAR-AKALLAR-KGAEFNEIDA 38 (92)
T ss_dssp CCCCEEEEECTTCHHHHH-HHHHHHH-TTCCCEEEES
T ss_pred CcccEEEEECCCChhHHH-HHHHHHH-cCCCcEEEEC
Confidence 566777777778999974 4555543 2555444444
No 70
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=24.56 E-value=22 Score=21.97 Aligned_cols=23 Identities=17% Similarity=0.164 Sum_probs=17.2
Q ss_pred cCCCCe--eEEEecCCCCCcEEEEcc
Q 048349 25 GGMPGV--ESVAFKGDDRSQIEVTGD 48 (94)
Q Consensus 25 ~~~~GV--~sV~id~~~~~kvtV~G~ 48 (94)
..+||+ +.+.+.. ..+.|+|.|+
T Consensus 17 ~dlPG~~~edI~V~v-~~~~L~I~g~ 41 (101)
T 2wj5_A 17 LDVKHFSPEEISVKV-VGDHVEVHAR 41 (101)
T ss_dssp EECTTSCGGGEEEEE-ETTEEEEEEE
T ss_pred EECCCCcHHHeEEEE-ECCEEEEEEE
Confidence 457888 4466666 5689999998
No 71
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}
Probab=24.09 E-value=47 Score=25.40 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=20.3
Q ss_pred CCcEEEEccccCHHHHHHHHHhhcC
Q 048349 40 RSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 40 ~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
+-.|.|.|+ +|+..+...+++.++
T Consensus 211 n~~l~vvGd-vd~~~~~~~i~~~f~ 234 (492)
T 3go9_A 211 AMTLYVVGN-VDSRSIAAQISKAFS 234 (492)
T ss_dssp GEEEEEEES-CCHHHHHHHHHHHHT
T ss_pred ceEEEEEcC-CCHHHHHHHHHHHhh
Confidence 346889999 999999999988765
No 72
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=23.97 E-value=2.1e+02 Score=21.74 Aligned_cols=45 Identities=9% Similarity=0.169 Sum_probs=31.4
Q ss_pred hHHHHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHhhcC
Q 048349 16 SRSKALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 16 C~~K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
..+.+++++..++++. +.. ..+++.|..++-|+..++++|++-+|
T Consensus 37 L~~ni~~~l~~~~~~~---v~~-~~gri~v~~~~~~~~~~~~~L~~vfG 81 (413)
T 2c5s_A 37 LKDNVKFKLKKFPNIK---IDA-THDRMYIQLNGEDHEAVSERLKDVFG 81 (413)
T ss_dssp HHHHHHHHTTTSTTCE---EEE-CSSCEEEECTTCCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHhhcCceE---EEE-ECCEEEEEeCCCCHHHHHHHHhhCCC
Confidence 4556777777765543 444 55888887653478889999998666
No 73
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=23.58 E-value=24 Score=21.24 Aligned_cols=23 Identities=22% Similarity=0.133 Sum_probs=16.8
Q ss_pred cCCCCee--EEEecCCCCCcEEEEcc
Q 048349 25 GGMPGVE--SVAFKGDDRSQIEVTGD 48 (94)
Q Consensus 25 ~~~~GV~--sV~id~~~~~kvtV~G~ 48 (94)
..+||+. .|.+.. ..+.|+|.|.
T Consensus 12 ~dlPG~~~edi~V~v-~~~~L~I~g~ 36 (90)
T 2y1y_A 12 LDVKHFSPEELKVKV-LGDVIEVHGK 36 (90)
T ss_dssp EECTTSCGGGEEEEE-ETTEEEEEEE
T ss_pred EECCCCcHHHeEEEE-ECCEEEEEEE
Confidence 4578873 466666 5689999997
No 74
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=23.35 E-value=1.2e+02 Score=18.88 Aligned_cols=32 Identities=13% Similarity=0.255 Sum_probs=22.9
Q ss_pred EEEEeCcch-hhHHHHHHHhcCCCCeeEEEecC
Q 048349 6 GIEQPLEND-KSRSKALKIVGGMPGVESVAFKG 37 (94)
Q Consensus 6 VlKV~m~c~-~C~~K~~k~i~~~~GV~sV~id~ 37 (94)
-+-+-+.++ +.-..+...++.++||+|+++..
T Consensus 52 ~i~~vveD~~~~td~lee~i~~~e~Vqsvdv~~ 84 (89)
T 1gh8_A 52 NVMVVVGDAEGGTEAAEESLSGIEGVSNIEVTD 84 (89)
T ss_dssp EEEEEESSSCGGGGHHHHHHTTSCSSEEEEEEE
T ss_pred EEEEEEEcCCcChHHHHHHHhccCCccEEEEEE
Confidence 334444433 66677888899999999999863
No 75
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=22.86 E-value=64 Score=22.30 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=28.6
Q ss_pred cCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHH
Q 048349 25 GGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLR 60 (94)
Q Consensus 25 ~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~Lr 60 (94)
..+|||..+..|+ .+.+|+=--+-+|-..+.+.|.
T Consensus 118 ~aiPGVTtlklDm-~~~Rv~eh~DlmDyqTm~DQl~ 152 (154)
T 3gzb_A 118 VAIPAVTSLKLDM-LNRRVTEHVDLIDYQTMSDQLA 152 (154)
T ss_dssp EEEEEEEEEEEET-TTTEEEEEEEEECHHHHHHHHT
T ss_pred EecCceEEEeecC-CccchhhhHhHHhHHHHHHHhh
Confidence 3679999999998 8889987776678888777663
No 76
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=22.54 E-value=54 Score=23.84 Aligned_cols=24 Identities=21% Similarity=0.181 Sum_probs=19.9
Q ss_pred CCcEEEEccccCHHHHHHHHHhhcC
Q 048349 40 RSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 40 ~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
+-.+.|+|+ +|+..+...+++.++
T Consensus 188 n~~l~v~Gd-~~~~~~~~~i~~~f~ 211 (443)
T 1hr6_B 188 RMVLAGAGA-VDHEKLVQYAQKYFG 211 (443)
T ss_dssp GEEEEEEES-CCHHHHHHHHHHHHT
T ss_pred CEEEEEEcC-CCHHHHHHHHHHHhc
Confidence 346788999 999999999988665
No 77
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ...
Probab=21.49 E-value=58 Score=23.87 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=19.8
Q ss_pred CCcEEEEccccCHHHHHHHHHhhcC
Q 048349 40 RSQIEVTGDGMDAIVLFMSLRKKLR 64 (94)
Q Consensus 40 ~~kvtV~G~~vDp~~l~~~LrKk~~ 64 (94)
+-.+.|+|+ +|+.++.+.+++.++
T Consensus 194 n~~l~v~Gd-~~~~~~~~~i~~~f~ 217 (446)
T 1pp9_A 194 RMVLAAAGG-LEHRQLLDLAQKHFS 217 (446)
T ss_dssp GEEEEEEES-CCHHHHHHHHHHHHT
T ss_pred CEEEEEEcC-CCHHHHHHHHHHHhc
Confidence 346788999 999999999988665
No 78
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=21.47 E-value=1.1e+02 Score=21.36 Aligned_cols=28 Identities=21% Similarity=0.154 Sum_probs=23.3
Q ss_pred EecCCCCCcEEEEccccCHHHHHHHHHhhc
Q 048349 34 AFKGDDRSQIEVTGDGMDAIVLFMSLRKKL 63 (94)
Q Consensus 34 ~id~~~~~kvtV~G~~vDp~~l~~~LrKk~ 63 (94)
.+|. +.+++.|.|. .++..|-+.|++..
T Consensus 66 ~id~-~~~rliinG~-~~~~~i~~~L~~yI 93 (170)
T 2g2k_A 66 QFDV-KNDRYIVNGS-HEANKLQDMLDGFI 93 (170)
T ss_dssp EECT-TTCCEEEEBC-CCHHHHHHHHHHHH
T ss_pred eecC-CCCEEEEEee-eCHHHHHHHHHHHH
Confidence 4664 6899999999 99999999988744
No 79
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=21.45 E-value=1.1e+02 Score=19.00 Aligned_cols=41 Identities=24% Similarity=0.333 Sum_probs=24.7
Q ss_pred HHHHHhcCCCCeeEEEecCCCCCcEEEEccccCHHHHHHHHHh
Q 048349 19 KALKIVGGMPGVESVAFKGDDRSQIEVTGDGMDAIVLFMSLRK 61 (94)
Q Consensus 19 K~~k~i~~~~GV~sV~id~~~~~kvtV~G~~vDp~~l~~~LrK 61 (94)
.++++..+..|| .|.+.. +.+.||+.|..-+..+....|.+
T Consensus 48 ~Ik~i~~~~~~v-~I~fp~-~~~~ItI~G~~~~V~~a~~~I~~ 88 (102)
T 2ctf_A 48 NLAKITQQMPKV-HIEFTE-GEDKITLEGPTEDVSVAQEQIEG 88 (102)
T ss_dssp HHHHHHHHCSSS-EEEECS-SSCEEEEEECHHHHHHHHHHHHH
T ss_pred cHHHHHHHcCCc-EEEeCC-CCCEEEEECCHHHHHHHHHHHHH
Confidence 344444446676 577775 77899999983334444444433
No 80
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=20.70 E-value=1.3e+02 Score=17.02 Aligned_cols=52 Identities=19% Similarity=0.261 Sum_probs=33.2
Q ss_pred CceeEEEEEeCcchhhH----HHHHHHhcCCCCeeEEEecCCC-------CCcEEEEccccCHHH
Q 048349 1 MKRMVGIEQPLENDKSR----SKALKIVGGMPGVESVAFKGDD-------RSQIEVTGDGMDAIV 54 (94)
Q Consensus 1 M~q~vVlKV~m~c~~C~----~K~~k~i~~~~GV~sV~id~~~-------~~kvtV~G~~vDp~~ 54 (94)
|+.+..+.|+-..-|+- .+..+.+....|+ .|.++.+. ...+++.|. .+...
T Consensus 1 ~~~~~~i~Ip~~~vg~IIGkgG~~Ik~I~~~tga-~I~i~~~~~~~~~~~~~~v~I~G~-~~~v~ 63 (76)
T 1dtj_A 1 MKELVEMAVPENLVGAILGKGGKTLVEYQELTGA-RIQISKKGEFLPGTRNRRVTITGS-PAATQ 63 (76)
T ss_dssp CCEEEEEEEETTTHHHHHCSTTHHHHHHHHHHCC-EEEECCTTCCSTTCCEEEEEEEES-HHHHH
T ss_pred CceEEEEEEChHHcceEECCCchHHHHHHHHhCC-EEEECcCCCCCCCCceeEEEEEeC-HHHHH
Confidence 66677788877766653 4455556666787 47887421 258999997 44333
No 81
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=20.40 E-value=87 Score=18.14 Aligned_cols=33 Identities=9% Similarity=0.073 Sum_probs=23.9
Q ss_pred eEEEEEeCcchhhH-----HHHHHHhcCCCCeeEEEecC
Q 048349 4 MVGIEQPLENDKSR-----SKALKIVGGMPGVESVAFKG 37 (94)
Q Consensus 4 ~vVlKV~m~c~~C~-----~K~~k~i~~~~GV~sV~id~ 37 (94)
+|+|-..-.|.-|+ ++|++.+.. .||.-..+|.
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~-~~i~~~~~di 40 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDG-KRIQYQLVDI 40 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH-TTCCCEEEET
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHH-CCCceEEEEC
Confidence 56666677899997 888888865 4666555555
No 82
>2a7w_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; structural genomics, PSI, protein structure initiative; 2.80A {Chromobacterium violaceum} SCOP: a.204.1.4
Probab=20.15 E-value=57 Score=21.46 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=14.1
Q ss_pred ccCHHHHHHHHHhhcCc
Q 048349 49 GMDAIVLFMSLRKKLRY 65 (94)
Q Consensus 49 ~vDp~~l~~~LrKk~~~ 65 (94)
|+++.+|...|+++.+.
T Consensus 79 gv~l~dV~~eL~~R~~~ 95 (116)
T 2a7w_A 79 GLRPEDVVMELHRREGI 95 (116)
T ss_dssp TCCHHHHHHHHHHHCC-
T ss_pred CCCHHHHHHHHHHHhcc
Confidence 58999999999987764
Done!