BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048356
         (82 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q2JB35|LIPB_FRASC Octanoyltransferase OS=Frankia sp. (strain CcI3) GN=lipB PE=3
          SV=1
          Length = 221

 Score = 34.3 bits (77), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 26/56 (46%)

Query: 12 RNSTNWTVVVDEIVKMEKKIFPKHESLARSFDEELKKKNSGLLYIHIHGQVVGYVM 67
          R  T W +    +  + K+  P+H  LA       +    GLL  H  GQ+VGYVM
Sbjct: 16 RPDTLWFLSHPPVYTVGKRTPPEHRPLAGLGIPVHETNRGGLLTYHAPGQLVGYVM 71


>sp|Q976C3|Y258_SULTO Uncharacterized N-acetyltransferase STK_02580 OS=Sulfolobus
          tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
          7) GN=STK_02580 PE=3 SV=1
          Length = 167

 Score = 30.0 bits (66), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 21 VDEIVKMEKKIFPKHESLARSFDEELKKKNSGLLYIHIHGQVVGYVM 67
          VD+I+K+ +   P++      F E LK+  +      + G+VVGY+M
Sbjct: 22 VDQIIKINRLALPENYPYY-FFVEHLKEYEAAFFVAEVDGEVVGYIM 67


>sp|Q4JBG0|Y459_SULAC Uncharacterized N-acetyltransferase Saci_0459 OS=Sulfolobus
          acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929
          / NBRC 15157 / NCIMB 11770) GN=Saci_0459 PE=3 SV=1
          Length = 168

 Score = 29.3 bits (64), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 7  VTELQRNSTNWTVV------VDEIVKMEKKIFPKHESLARSFDEELKKKNSGLLYIHIHG 60
          +TE  +   N+ +       +D+I+++ +   P++      F E LK+         + G
Sbjct: 3  ITEDSKRKINYQIRLATLSDIDQIIRINRSALPENYPYY-FFVEHLKEYGQAFYVADLEG 61

Query: 61 QVVGYVM 67
          +VVGYVM
Sbjct: 62 EVVGYVM 68


>sp|Q5UR49|YR568_MIMIV Putative ATP-dependent DNA helicase R568 OS=Acanthamoeba polyphaga
           mimivirus GN=MIMI_R568 PE=3 SV=1
          Length = 695

 Score = 29.3 bits (64), Expect = 7.9,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 3   SNGTVTELQRNSTNWTVVVDEIVKM----EKKIFPKHESLARSFDEEL 46
           SNG    L++ S      + E++K+    EK+IFP H  + R  DE L
Sbjct: 498 SNGVTELLEKLSEEDLYSIYELIKVNTFYEKRIFPDHTDIDRGKDEAL 545


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.129    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,361,636
Number of Sequences: 539616
Number of extensions: 915808
Number of successful extensions: 3348
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3347
Number of HSP's gapped (non-prelim): 10
length of query: 82
length of database: 191,569,459
effective HSP length: 53
effective length of query: 29
effective length of database: 162,969,811
effective search space: 4726124519
effective search space used: 4726124519
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)